BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006076
(662 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 994 bits (2570), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/655 (73%), Positives = 551/655 (84%), Gaps = 6/655 (0%)
Query: 10 PQLLRSPYHT-NSIAHLPPKPSSVCCCVSLNSSTTPTSLSSR-NKNELIQSLCKQGNLRQ 67
PQ+++ YHT N + P KP S C V+LN+ + + ++ + N+LIQSLCK+G L+Q
Sbjct: 7 PQVIQPTYHTVNFLPRSPLKPPS--CSVALNNPSISSGAGAKISNNQLIQSLCKEGKLKQ 64
Query: 68 ALDVLSIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSH 127
A+ VLS E +P+Q TYELL+L C H +SLSDAL VH H+ DNG DQDPFL TKLI +YS
Sbjct: 65 AIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSD 124
Query: 128 FDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYT 187
SVD AR VFDKTR+RTIYVWNALFRALTLAG GEEVL LY +MN G + SDRFTYT
Sbjct: 125 LGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIG--VESDRFTYT 182
Query: 188 YVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQ 247
YVLKACVAS C + L GKEIHA + R GY+ V+IMTTL+DMYARFGCV YA +VF
Sbjct: 183 YVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGG 242
Query: 248 MAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALE 307
M V+NVVSWSAMIACYA+NG AFEAL FREM+ E+ D PNSVTMVSVLQACA+LAALE
Sbjct: 243 MPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALE 302
Query: 308 QGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYG 367
QGK+IHGYILRRGLDSILPV+SALVTMY RCGKLE+GQ VFD M RDVVSWNSLISSYG
Sbjct: 303 QGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYG 362
Query: 368 VHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSV 427
VHGYG KAIQIF+EM+ +G SP+P++FVSVLGACSH GLVEEGK LFE+M ++H I+P +
Sbjct: 363 VHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQI 422
Query: 428 EHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFE 487
EHYACMVDLLGRAN+L+EAAK+++D+R EPGPKVWGSLLGSCRIH NVELAERAS+RLF
Sbjct: 423 EHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFA 482
Query: 488 LEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQKVPGRSRIEVKRKMYSFVSVDE 547
LEP NAGNYVLLAD+YA A MWDEVKRVK+LLE RGLQK+PGR +EV+RKMYSFVSVDE
Sbjct: 483 LEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDE 542
Query: 548 FHPQFEQLHALLINLSAEMKEKGYVPQTKVVLYDLDAEEKERIVLGHSEKLAVAFGLINT 607
F+P EQ+HA L+ L+ +MKEKGY+PQTK VLY+L+ EEKERIVLGHSEKLA+AFGLINT
Sbjct: 543 FNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINT 602
Query: 608 SKGETIRITKNLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRNGVCSCGDYW 662
SKGE IRITKNLRLCEDCH FTKFISKF KEILVRDVNRFH F+NGVCSCGDYW
Sbjct: 603 SKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 485 bits (1248), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/611 (40%), Positives = 381/611 (62%), Gaps = 8/611 (1%)
Query: 53 NELIQSLCKQGNLRQALDVLSIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFD 112
N +I C+ GN ++AL + + T LL +CT + + +HS+ +G +
Sbjct: 220 NAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLE 279
Query: 113 QDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRM 172
+ F+ KLI++Y+ F + D + VFD+ R + WN++ +A L + + L++ M
Sbjct: 280 SELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM 339
Query: 173 NGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYN-GIVHIMTTLIDM 231
+ R T + A + S G ++ + + LR G+ + I ++ M
Sbjct: 340 RLS----RIQPDCLTLISLASILSQLGD--IRACRSVQGFTLRKGWFLEDITIGNAVVVM 393
Query: 232 YARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSV 291
YA+ G V A VF+ + +V+SW+ +I+ YA+NG A EA+E++ ++ E ++ N
Sbjct: 394 YAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMY-NIMEEEGEIAANQG 452
Query: 292 TMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHM 351
T VSVL AC+ AL QG +HG +L+ GL + VV++L MY +CG+LE +F +
Sbjct: 453 TWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQI 512
Query: 352 DKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGK 411
+ + V WN+LI+ +G HG+G KA+ +FKEM+ GV P I+FV++L ACSH+GLV+EG+
Sbjct: 513 PRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQ 572
Query: 412 MLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRI 471
FE M+ ++ I PS++HY CMVD+ GRA +LE A K I+ + ++P +WG+LL +CR+
Sbjct: 573 WCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRV 632
Query: 472 HCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQKVPGRS 531
H NV+L + AS+ LFE+EP + G +VLL+++YA+A W+ V ++ + +GL+K PG S
Sbjct: 633 HGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWS 692
Query: 532 RIEVKRKMYSFVSVDEFHPQFEQLHALLINLSAEMKEKGYVPQTKVVLYDLDAEEKERIV 591
+EV K+ F + ++ HP +E+++ L L A++K GYVP + VL D++ +EKE I+
Sbjct: 693 SMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHIL 752
Query: 592 LGHSEKLAVAFGLINTSKGETIRITKNLRLCEDCHSFTKFISKFANKEILVRDVNRFHHF 651
+ HSE+LA+AF LI T TIRI KNLR+C DCHS TKFISK +EI+VRD NRFHHF
Sbjct: 753 MSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHF 812
Query: 652 RNGVCSCGDYW 662
+NGVCSCGDYW
Sbjct: 813 KNGVCSCGDYW 823
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 181/353 (51%), Gaps = 34/353 (9%)
Query: 56 IQSLCKQGNLRQALDVLSIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDP 115
+Q K GN + +D + HT L CT+ L A +H+ L + Q+
Sbjct: 41 LQDCWKNGNESKEIDDV--------HT---LFRYCTN---LQSAKCLHARLVVSKQIQNV 86
Query: 116 FLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGT 175
+ KL+N+Y + +V ARH FD + R +Y WN + AG EV+ + +
Sbjct: 87 CISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFS-LFML 145
Query: 176 GTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARF 235
+G+ D T+ VLKAC + G +IH L+ G+ V++ +LI +Y+R+
Sbjct: 146 SSGLTPDYRTFPSVLKAC-------RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRY 198
Query: 236 GCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALEL---FREMIMESHDLCPNSVT 292
V A +F +M V+++ SW+AMI+ Y ++G A EAL L R M +SVT
Sbjct: 199 KAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM---------DSVT 249
Query: 293 MVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMD 352
+VS+L AC +G IH Y ++ GL+S L V + L+ +YA G+L Q VFD M
Sbjct: 250 VVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMY 309
Query: 353 KRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAG 405
RD++SWNS+I +Y ++ +AI +F+EM + P ++ +S+ S G
Sbjct: 310 VRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 475 bits (1223), Expect = e-133, Method: Compositional matrix adjust.
Identities = 247/627 (39%), Positives = 392/627 (62%), Gaps = 24/627 (3%)
Query: 53 NELIQSLCKQGNLRQALDVL------SIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHL 106
N ++ SLC+ L +AL+ L +EP+ + T +L +C+H L +H++
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEGVEPD--EFTISSVLPACSHLEMLRTGKELHAYA 328
Query: 107 TDNG-FDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEV 165
NG D++ F+ + L+++Y + V R VFD R I +WNA+ + +E
Sbjct: 329 LKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEA 388
Query: 166 LELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIM 225
L L+ M + G+ ++ T V+ ACV S + IH V++ G + +
Sbjct: 389 LLLFIGMEESA-GLLANSTTMAGVVPACVRSGA----FSRKEAIHGFVVKRGLDRDRFVQ 443
Query: 226 TTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMI-MESH 284
TL+DMY+R G + A +F +M +++V+W+ MI Y + +AL L +M +E
Sbjct: 444 NTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERK 503
Query: 285 --------DLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYA 336
L PNS+T++++L +CAAL+AL +GK IH Y ++ L + + V SALV MYA
Sbjct: 504 VSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYA 563
Query: 337 RCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVS 396
+CG L++ + VFD + +++V++WN +I +YG+HG G +AI + + M+ GV P+ ++F+S
Sbjct: 564 KCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFIS 623
Query: 397 VLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDL-RI 455
V ACSH+G+V+EG +F M+ ++ + PS +HYAC+VDLLGRA +++EA +++ + R
Sbjct: 624 VFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRD 683
Query: 456 EPGPKVWGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRV 515
W SLLG+ RIH N+E+ E A++ L +LEP A +YVLLA++Y++A +WD+ V
Sbjct: 684 FNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEV 743
Query: 516 KRLLEARGLQKVPGRSRIEVKRKMYSFVSVDEFHPQFEQLHALLINLSAEMKEKGYVPQT 575
+R ++ +G++K PG S IE +++ FV+ D HPQ E+L L L M+++GYVP T
Sbjct: 744 RRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDT 803
Query: 576 KVVLYDLDAEEKERIVLGHSEKLAVAFGLINTSKGETIRITKNLRLCEDCHSFTKFISKF 635
VL++++ +EKE ++ GHSEKLA+AFG++NTS G IR+ KNLR+C DCH TKFISK
Sbjct: 804 SCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKI 863
Query: 636 ANKEILVRDVNRFHHFRNGVCSCGDYW 662
++EI++RDV RFH F+NG CSCGDYW
Sbjct: 864 VDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 209/457 (45%), Gaps = 22/457 (4%)
Query: 7 PQTPQLLRSPYHTNSIAHLPPKPSSVCCCVSLNSSTTPTSLSSRNKN-----ELIQSLCK 61
P QLL H + L P+S V+ S P+ S++++ +L++S +
Sbjct: 16 PFPSQLLPFSRHKHPYL-LRATPTSATEDVASAVSGAPSIFISQSRSPEWWIDLLRSKVR 74
Query: 62 QGNLRQAL----DVLSIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFL 117
LR+A+ D++ + P + + LL + + +H+H+ G+ D
Sbjct: 75 SNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVT 134
Query: 118 VTK-LINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTG 176
V L+N+Y VFD+ R WN+L +L + E LE +R M
Sbjct: 135 VANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCM--LD 192
Query: 177 TGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHG-YNGIVHIMTTLIDMYARF 235
+ FT V+ AC L+ GK++HA LR G N I+ TL+ MY +
Sbjct: 193 ENVEPSSFTLVSVVTACSNLPMPEGLMM-GKQVHAYGLRKGELNSF--IINTLVAMYGKL 249
Query: 236 GCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVS 295
G + + + +++V+W+ +++ +N EALE REM++E + P+ T+ S
Sbjct: 250 GKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE--PDEFTISS 307
Query: 296 VLQACAALAALEQGKMIHGYILRRG-LDSILPVVSALVTMYARCGKLELGQCVFDHMDKR 354
VL AC+ L L GK +H Y L+ G LD V SALV MY C ++ G+ VFD M R
Sbjct: 308 VLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR 367
Query: 355 DVVSWNSLISSYGVHGYGGKAIQIFKEMIYH-GVSPSPISFVSVLGACSHAGLVEEGKML 413
+ WN++I+ Y + + +A+ +F M G+ + + V+ AC +G + +
Sbjct: 368 KIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAI 427
Query: 414 FESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKII 450
+ K + R M D+ R K++ A +I
Sbjct: 428 HGFVVKRGLDRDRFVQNTLM-DMYSRLGKIDIAMRIF 463
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 473 bits (1218), Expect = e-132, Method: Compositional matrix adjust.
Identities = 238/577 (41%), Positives = 355/577 (61%), Gaps = 7/577 (1%)
Query: 86 LLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRT 145
+ C +S VHS F ++ L+++YS +D A+ VF + R+
Sbjct: 302 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361
Query: 146 IYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKH 205
+ + ++ G E ++L+ M G I D +T T VL C + LL
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEG--ISPDVYTVTAVLNCCAR----YRLLDE 415
Query: 206 GKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYAR 265
GK +H + + + + L+DMYA+ G + A VFS+M VK+++SW+ +I Y++
Sbjct: 416 GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSK 475
Query: 266 NGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSIL 325
N A EAL LF +++E P+ T+ VL ACA+L+A ++G+ IHGYI+R G S
Sbjct: 476 NCYANEALSLF-NLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR 534
Query: 326 PVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYH 385
V ++LV MYA+CG L L +FD + +D+VSW +I+ YG+HG+G +AI +F +M
Sbjct: 535 HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQA 594
Query: 386 GVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEE 445
G+ ISFVS+L ACSH+GLV+EG F MR E I P+VEHYAC+VD+L R L +
Sbjct: 595 GIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIK 654
Query: 446 AAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAA 505
A + IE++ I P +WG+LL CRIH +V+LAE+ ++++FELEP N G YVL+A++YA
Sbjct: 655 AYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAE 714
Query: 506 ADMWDEVKRVKRLLEARGLQKVPGRSRIEVKRKMYSFVSVDEFHPQFEQLHALLINLSAE 565
A+ W++VKR+++ + RGL+K PG S IE+K ++ FV+ D +P+ E + A L + A
Sbjct: 715 AEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRAR 774
Query: 566 MKEKGYVPQTKVVLYDLDAEEKERIVLGHSEKLAVAFGLINTSKGETIRITKNLRLCEDC 625
M E+GY P TK L D + EKE + GHSEKLA+A G+I++ G+ IR+TKNLR+C DC
Sbjct: 775 MIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDC 834
Query: 626 HSFTKFISKFANKEILVRDVNRFHHFRNGVCSCGDYW 662
H KF+SK +EI++RD NRFH F++G CSC +W
Sbjct: 835 HEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 220/438 (50%), Gaps = 18/438 (4%)
Query: 41 STTPTSLSSRNKNELIQSLCKQGNLRQALDVLSIEP--NPTQHTYELLLLSCTHHNSLSD 98
S T S + N ++ C+ GNL A+ +L + + T +L C SL D
Sbjct: 53 SITTFDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKD 112
Query: 99 ALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTL 158
V + + NGF D L +KL +Y++ + +A VFD+ + WN L L
Sbjct: 113 GKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAK 172
Query: 159 AGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKH---GKEIHASVLR 215
+G + L+++M +G+ D +T++ CV+ S FS L+ G+++H +L+
Sbjct: 173 SGDFSGSIGLFKKM--MSSGVEMDSYTFS-----CVSKS--FSSLRSVHGGEQLHGFILK 223
Query: 216 HGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALEL 275
G+ + +L+ Y + V A VF +M ++V+SW+++I Y NG+A + L +
Sbjct: 224 SGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSV 283
Query: 276 FREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMY 335
F +M++ ++ + T+VSV CA + G+ +H ++ + L+ MY
Sbjct: 284 FVQMLVSGIEI--DLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMY 341
Query: 336 ARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFV 395
++CG L+ + VF M R VVS+ S+I+ Y G G+A+++F+EM G+SP +
Sbjct: 342 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT 401
Query: 396 SVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRI 455
+VL C+ L++EGK + E + KE+ + + ++D+ + ++EA + ++R+
Sbjct: 402 AVLNCCARYRLLDEGKRVHEWI-KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 460
Query: 456 EPGPKVWGSLLGSCRIHC 473
+ W +++G +C
Sbjct: 461 KDIIS-WNTIIGGYSKNC 477
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 107/253 (42%), Gaps = 23/253 (9%)
Query: 77 NPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARH 136
+P + T +L +C ++ +H ++ NG+ D + L+++Y+ ++ A
Sbjct: 496 SPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHM 555
Query: 137 VFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVAS 196
+FD + + W + + G G+E + L+ +M GI +D ++ +L AC S
Sbjct: 556 LFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR--QAGIEADEISFVSLLYACSHS 613
Query: 197 SC------GFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAV 250
F++++H +I +V + ++DM AR G ++ A M +
Sbjct: 614 GLVDEGWRFFNIMRHECKIEPTVEHY---------ACIVDMLARTGDLIKAYRFIENMPI 664
Query: 251 -KNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCP-NSVTMVSVLQACAALAALEQ 308
+ W A++ C R + E E + E L P N+ V + A EQ
Sbjct: 665 PPDATIWGALL-CGCRIHHDVKLAEKVAEKVFE---LEPENTGYYVLMANIYAEAEKWEQ 720
Query: 309 GKMIHGYILRRGL 321
K + I +RGL
Sbjct: 721 VKRLRKRIGQRGL 733
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 463 bits (1191), Expect = e-129, Method: Compositional matrix adjust.
Identities = 239/621 (38%), Positives = 379/621 (61%), Gaps = 17/621 (2%)
Query: 53 NELIQSLCKQGNLRQALDVLS----IEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTD 108
N +I L + G+ +AL S + PT+ ++ + +C+ + H
Sbjct: 45 NSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFV 104
Query: 109 NGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLEL 168
G+ D F+ + LI +YS ++DAR VFD+ +R I W ++ R L G + + L
Sbjct: 105 FGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSL 164
Query: 169 YRRM----NGTGTGIRSDRFTYTYVLKACV-ASSCGFSLLKHGKEIHASVLRHGYNGIVH 223
++ + N + D V+ AC + G + + IH+ V++ G++ V
Sbjct: 165 FKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLT-----ESIHSFVIKRGFDRGVS 219
Query: 224 IMTTLIDMYARFG--CVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIM 281
+ TL+D YA+ G V A +F Q+ K+ VS++++++ YA++GM+ EA E+FR ++
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLV- 278
Query: 282 ESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKL 341
++ + N++T+ +VL A + AL GK IH ++R GL+ + V ++++ MY +CG++
Sbjct: 279 KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRV 338
Query: 342 ELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGAC 401
E + FD M ++V SW ++I+ YG+HG+ KA+++F MI GV P+ I+FVSVL AC
Sbjct: 339 ETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAAC 398
Query: 402 SHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKV 461
SHAGL EG F +M+ + P +EHY CMVDLLGRA L++A +I+ ++++P +
Sbjct: 399 SHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSII 458
Query: 462 WGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEA 521
W SLL +CRIH NVELAE + RLFEL+ +N G Y+LL+ +YA A W +V+RV+ +++
Sbjct: 459 WSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKN 518
Query: 522 RGLQKVPGRSRIEVKRKMYSFVSVDEFHPQFEQLHALLINLSAEMKEKGYVPQTKVVLYD 581
RGL K PG S +E+ +++ F+ DE HPQ E+++ L L+ ++ E GYV T V +D
Sbjct: 519 RGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHD 578
Query: 582 LDAEEKERIVLGHSEKLAVAFGLINTSKGETIRITKNLRLCEDCHSFTKFISKFANKEIL 641
+D EEKE + HSEKLA+AFG++NT G T+ + KNLR+C DCH+ K ISK ++E +
Sbjct: 579 VDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFV 638
Query: 642 VRDVNRFHHFRNGVCSCGDYW 662
VRD RFHHF++G CSCGDYW
Sbjct: 639 VRDAKRFHHFKDGGCSCGDYW 659
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 88/166 (53%), Gaps = 11/166 (6%)
Query: 252 NVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKM 311
+V SW+++IA AR+G + EAL F M S L P + ++AC++L + GK
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLS--LYPTRSSFPCAIKACSSLFDIFSGKQ 97
Query: 312 IHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGY 371
H G S + V SAL+ MY+ CGKLE + VFD + KR++VSW S+I Y ++G
Sbjct: 98 THQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGN 157
Query: 372 GGKAIQIFKEMIYHGVSPSPISF------VSVLGACSHA---GLVE 408
A+ +FK+++ F VSV+ ACS GL E
Sbjct: 158 ALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE 203
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 5/106 (4%)
Query: 350 HMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEE 409
++DK DV SWNS+I+ G +A+ F M + P+ SF + ACS +
Sbjct: 35 YVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFS 94
Query: 410 GKMLFESMRKEHMIRPSVEHY--ACMVDLLGRANKLEEAAKIIEDL 453
GK ++ ++ + + + + ++ + KLE+A K+ +++
Sbjct: 95 GK---QTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEI 137
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 461 bits (1186), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/621 (39%), Positives = 367/621 (59%), Gaps = 44/621 (7%)
Query: 78 PTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSH---------- 127
P + + +L SCT L +VH + G D D + L+N+Y+
Sbjct: 103 PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISV 162
Query: 128 ---FD-----------------------SVDDARHVFDKTRRRTIYVWNALFRALTLAGR 161
FD +D R VF+ R+ + +N + +G
Sbjct: 163 GNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGM 222
Query: 162 GEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGI 221
E+ L + R M GT T ++ D FT + VL S ++K GKEIH V+R G +
Sbjct: 223 YEDALRMVREM-GT-TDLKPDSFTLSSVLPIF---SEYVDVIK-GKEIHGYVIRKGIDSD 276
Query: 222 VHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIM 281
V+I ++L+DMYA+ + + VFS++ ++ +SW++++A Y +NG EAL LFR+M+
Sbjct: 277 VYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMV- 335
Query: 282 ESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKL 341
+ + P +V SV+ ACA LA L GK +HGY+LR G S + + SALV MY++CG +
Sbjct: 336 -TAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNI 394
Query: 342 ELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGAC 401
+ + +FD M+ D VSW ++I + +HG+G +A+ +F+EM GV P+ ++FV+VL AC
Sbjct: 395 KAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTAC 454
Query: 402 SHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKV 461
SH GLV+E F SM K + + +EHYA + DLLGRA KLEEA I + +EP V
Sbjct: 455 SHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSV 514
Query: 462 WGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEA 521
W +LL SC +H N+ELAE+ ++++F ++ N G YVL+ ++YA+ W E+ +++ +
Sbjct: 515 WSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRK 574
Query: 522 RGLQKVPGRSRIEVKRKMYSFVSVDEFHPQFEQLHALLINLSAEMKEKGYVPQTKVVLYD 581
+GL+K P S IE+K K + FVS D HP ++++ L + +M+++GYV T VL+D
Sbjct: 575 KGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHD 634
Query: 582 LDAEEKERIVLGHSEKLAVAFGLINTSKGETIRITKNLRLCEDCHSFTKFISKFANKEIL 641
+D E K ++ GHSE+LAVAFG+INT G TIR+TKN+R+C DCH KFISK +EI+
Sbjct: 635 VDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREII 694
Query: 642 VRDVNRFHHFRNGVCSCGDYW 662
VRD +RFHHF G CSCGDYW
Sbjct: 695 VRDNSRFHHFNRGNCSCGDYW 715
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 184/371 (49%), Gaps = 45/371 (12%)
Query: 121 LINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIR 180
+I++Y++ + +A +F + + W ++ R T + L + M +G
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRC-- 102
Query: 181 SDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARF----- 235
D + VLK+C L+ G+ +H ++R G + ++ L++MYA+
Sbjct: 103 PDHNVFPSVLKSCTM----MMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGS 158
Query: 236 --------------------------GCVMYAGF-----VFSQMAVKNVVSWSAMIACYA 264
C+M G VF M K+VVS++ +IA YA
Sbjct: 159 KISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYA 218
Query: 265 RNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSI 324
++GM +AL + RE M + DL P+S T+ SVL + + +GK IHGY++R+G+DS
Sbjct: 219 QSGMYEDALRMVRE--MGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSD 276
Query: 325 LPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIY 384
+ + S+LV MYA+ ++E + VF + RD +SWNSL++ Y +G +A+++F++M+
Sbjct: 277 VYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVT 336
Query: 385 HGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLE 444
V P ++F SV+ AC+H + GK L + + ++ + +VD+ + ++
Sbjct: 337 AKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGG-FGSNIFIASALVDMYSKCGNIK 395
Query: 445 EAAKIIEDLRI 455
A KI + + +
Sbjct: 396 AARKIFDRMNV 406
Score = 125 bits (315), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 152/315 (48%), Gaps = 10/315 (3%)
Query: 57 QSLCKQGNLRQALDVLSIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPF 116
QS + LR ++ + + P T +L + + + +H ++ G D D +
Sbjct: 219 QSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVY 278
Query: 117 LVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTG 176
+ + L+++Y+ ++D+ VF + R WN+L GR E L L+R+M
Sbjct: 279 IGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQM--VT 336
Query: 177 TGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFG 236
++ ++ V+ AC + L GK++H VLR G+ + I + L+DMY++ G
Sbjct: 337 AKVKPGAVAFSSVIPACAH----LATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCG 392
Query: 237 CVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSV 296
+ A +F +M V + VSW+A+I +A +G EA+ LF E M+ + PN V V+V
Sbjct: 393 NIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEE--MKRQGVKPNQVAFVAV 450
Query: 297 LQACAALAALEQGKMIHGYILR-RGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRD 355
L AC+ + +++ + + GL+ L +A+ + R GKLE M
Sbjct: 451 LTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEP 510
Query: 356 VVS-WNSLISSYGVH 369
S W++L+SS VH
Sbjct: 511 TGSVWSTLLSSCSVH 525
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 134/300 (44%), Gaps = 43/300 (14%)
Query: 205 HGKEIHASVLRHGYNGIVHIMTTL-IDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACY 263
K++HA +R + H ++ I +Y + A +F + V++W ++I C+
Sbjct: 23 QAKQLHAQFIR--TQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCF 80
Query: 264 ARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDS 323
+ +AL F EM + CP+ SVL++C + L G+ +HG+I+R G+D
Sbjct: 81 TDQSLFSKALASFVEM--RASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDC 138
Query: 324 ILPVVSALVTMYARC----GKLELGQC--------------------------------V 347
L +AL+ MYA+ K+ +G V
Sbjct: 139 DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRV 198
Query: 348 FDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLV 407
F+ M ++DVVS+N++I+ Y G A+++ +EM + P + SVL S V
Sbjct: 199 FEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDV 258
Query: 408 EEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLG 467
+GK + + ++ I V + +VD+ ++ ++E++ ++ L G W SL+
Sbjct: 259 IKGKEIHGYVIRKG-IDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS-WNSLVA 316
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 95/215 (44%), Gaps = 12/215 (5%)
Query: 53 NELIQSLCKQGNLRQAL----DVLSIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTD 108
N L+ + G +AL +++ + P + ++ +C H +L +H ++
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 371
Query: 109 NGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLEL 168
GF + F+ + L+++YS ++ AR +FD+ W A+ L G G E + L
Sbjct: 372 GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSL 431
Query: 169 YRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLR-HGYNGIVHIMTT 227
+ M G++ ++ + VL AC S G L+ S+ + +G N +
Sbjct: 432 FEEMK--RQGVKPNQVAFVAVLTAC--SHVG--LVDEAWGYFNSMTKVYGLNQELEHYAA 485
Query: 228 LIDMYARFGCVMYAGFVFSQMAVKNVVS-WSAMIA 261
+ D+ R G + A S+M V+ S WS +++
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLS 520
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust.
Identities = 229/564 (40%), Positives = 346/564 (61%), Gaps = 11/564 (1%)
Query: 99 ALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTL 158
+ +HS T G +++T I++YS + +F + R+ I +NA+ T
Sbjct: 240 GMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTS 299
Query: 159 AGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGY 218
G E L L++ + +G +RS L + V S L+ IH L+ +
Sbjct: 300 NGETELSLSLFKELMLSGARLRSS------TLVSLVPVSGHLMLIY---AIHGYCLKSNF 350
Query: 219 NGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFRE 278
+ T L +Y++ + A +F + K++ SW+AMI+ Y +NG+ +A+ LFRE
Sbjct: 351 LSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFRE 410
Query: 279 MIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARC 338
M + + PN VT+ +L ACA L AL GK +H + +S + V +AL+ MYA+C
Sbjct: 411 M--QKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKC 468
Query: 339 GKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVL 398
G + + +FD M K++ V+WN++IS YG+HG G +A+ IF EM+ G++P+P++F+ VL
Sbjct: 469 GSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVL 528
Query: 399 GACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPG 458
ACSHAGLV+EG +F SM + PSV+HYACMVD+LGRA L+ A + IE + IEPG
Sbjct: 529 YACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPG 588
Query: 459 PKVWGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRL 518
VW +LLG+CRIH + LA S++LFEL+P N G +VLL+++++A + + V++
Sbjct: 589 SSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQT 648
Query: 519 LEARGLQKVPGRSRIEVKRKMYSFVSVDEFHPQFEQLHALLINLSAEMKEKGYVPQTKVV 578
+ R L K PG + IE+ + F S D+ HPQ ++++ L L +M+E GY P+T++
Sbjct: 649 AKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELA 708
Query: 579 LYDLDAEEKERIVLGHSEKLAVAFGLINTSKGETIRITKNLRLCEDCHSFTKFISKFANK 638
L+D++ EE+E +V HSE+LA+AFGLI T G IRI KNLR+C DCH+ TK ISK +
Sbjct: 709 LHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITER 768
Query: 639 EILVRDVNRFHHFRNGVCSCGDYW 662
I+VRD NRFHHF++GVCSCGDYW
Sbjct: 769 VIVVRDANRFHHFKDGVCSCGDYW 792
Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 194/416 (46%), Gaps = 19/416 (4%)
Query: 58 SLCKQGNLRQALDVLSIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFL 117
SL +LR++ D+ P TY + + + +H +G D + L
Sbjct: 102 SLSVFAHLRKSTDL-----KPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLL 156
Query: 118 VTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRM-NGTG 176
+ ++ +Y F V+DAR VFD+ + +WN + E ++++R + N +
Sbjct: 157 GSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESC 216
Query: 177 TGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFG 236
T R D T +L A L+ G +IH+ + G +++T I +Y++ G
Sbjct: 217 T--RLDTTTLLDILPAVAE----LQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCG 270
Query: 237 CVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSV 296
+ +F + ++V+++AMI Y NG +L LF+E+++ L S T+VS+
Sbjct: 271 KIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARL--RSSTLVSL 328
Query: 297 LQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDV 356
+ L + IHGY L+ S V +AL T+Y++ ++E + +FD ++ +
Sbjct: 329 VPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSL 385
Query: 357 VSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFES 416
SWN++IS Y +G AI +F+EM SP+P++ +L AC+ G + GK + +
Sbjct: 386 PSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDL 445
Query: 417 MRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIH 472
+R S+ ++ + + + EA ++ DL + W +++ +H
Sbjct: 446 VRSTDF-ESSIYVSTALIGMYAKCGSIAEARRLF-DLMTKKNEVTWNTMISGYGLH 499
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 163/316 (51%), Gaps = 10/316 (3%)
Query: 94 NSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALF 153
S+S H+ + +GF D L+TKL S ++ AR +F +R ++++N L
Sbjct: 31 TSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLM 90
Query: 154 RALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASV 213
R ++ L ++ + + T ++ + TY + + A + GF + G+ IH
Sbjct: 91 RGFSVNESPHSSLSVFAHLRKS-TDLKPNSSTYAFAISA----ASGFRDDRAGRVIHGQA 145
Query: 214 LRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEAL 273
+ G + + + + ++ MY +F V A VF +M K+ + W+ MI+ Y +N M E++
Sbjct: 146 VVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESI 205
Query: 274 ELFREMIMESHDLCP--NSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSAL 331
++FR++I ES C ++ T++ +L A A L L G IH + G S V++
Sbjct: 206 QVFRDLINES---CTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGF 262
Query: 332 VTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSP 391
+++Y++CGK+++G +F K D+V++N++I Y +G ++ +FKE++ G
Sbjct: 263 ISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRS 322
Query: 392 ISFVSVLGACSHAGLV 407
+ VS++ H L+
Sbjct: 323 STLVSLVPVSGHLMLI 338
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 17/219 (7%)
Query: 53 NELIQSLCKQGNLRQALDVL------SIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHL 106
N +I + G A+ + PNP T +L +C +LS VH +
Sbjct: 389 NAMISGYTQNGLTEDAISLFREMQKSEFSPNPV--TITCILSACAQLGALSLGKWVHDLV 446
Query: 107 TDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVL 166
F+ ++ T LI +Y+ S+ +AR +FD ++ WN + L G+G+E L
Sbjct: 447 RSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEAL 506
Query: 167 ELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVL-RHGYNGIVHIM 225
++ M +GI T+ VL AC S G L+K G EI S++ R+G+ V
Sbjct: 507 NIFYEM--LNSGITPTPVTFLCVLYAC--SHAG--LVKEGDEIFNSMIHRYGFEPSVKHY 560
Query: 226 TTLIDMYARFGCVMYAGFVFSQMAVKNVVS-WSAMI-AC 262
++D+ R G + A M+++ S W ++ AC
Sbjct: 561 ACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGAC 599
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/616 (38%), Positives = 379/616 (61%), Gaps = 15/616 (2%)
Query: 53 NELIQSLCKQGNLRQALDVLS----IEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTD 108
N +I+ + + + AL + S +P T+ LL +C+ + L VH+ +
Sbjct: 88 NAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFR 147
Query: 109 NGFDQDPFLVTKLINVYSHFDSVDDARHVFD--KTRRRTIYVWNALFRALTLAGRGEEVL 166
GFD D F+ LI +Y+ + AR VF+ RTI W A+ A G E L
Sbjct: 148 LGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEAL 207
Query: 167 ELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMT 226
E++ +M ++ D VL A +C LK G+ IHASV++ G ++
Sbjct: 208 EIFSQMRKMD--VKPDWVALVSVLNAF---TC-LQDLKQGRSIHASVVKMGLEIEPDLLI 261
Query: 227 TLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDL 286
+L MYA+ G V A +F +M N++ W+AMI+ YA+NG A EA+++F EMI + D+
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMI--NKDV 319
Query: 287 CPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQC 346
P+++++ S + ACA + +LEQ + ++ Y+ R + + SAL+ M+A+CG +E +
Sbjct: 320 RPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARL 379
Query: 347 VFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGL 406
VFD RDVV W+++I YG+HG +AI +++ M GV P+ ++F+ +L AC+H+G+
Sbjct: 380 VFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGM 439
Query: 407 VEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLL 466
V EG F M +H I P +HYAC++DLLGRA L++A ++I+ + ++PG VWG+LL
Sbjct: 440 VREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALL 498
Query: 467 GSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQK 526
+C+ H +VEL E A+++LF ++P+N G+YV L+++YAAA +WD V V+ ++ +GL K
Sbjct: 499 SACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNK 558
Query: 527 VPGRSRIEVKRKMYSFVSVDEFHPQFEQLHALLINLSAEMKEKGYVPQTKVVLYDLDAEE 586
G S +EV+ ++ +F D+ HP++E++ + + + +KE G+V L+DL+ EE
Sbjct: 559 DVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEE 618
Query: 587 KERIVLGHSEKLAVAFGLINTSKGETIRITKNLRLCEDCHSFTKFISKFANKEILVRDVN 646
E + HSE++A+A+GLI+T +G +RITKNLR C +CH+ TK ISK ++EI+VRD N
Sbjct: 619 AEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTN 678
Query: 647 RFHHFRNGVCSCGDYW 662
RFHHF++GVCSCGDYW
Sbjct: 679 RFHHFKDGVCSCGDYW 694
Score = 215 bits (548), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 127/392 (32%), Positives = 212/392 (54%), Gaps = 15/392 (3%)
Query: 83 YELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTR 142
Y L+ S TH L +H+ L G FL+TKLI+ S F + AR VFD
Sbjct: 24 YASLIDSATHKAQLK---QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP 80
Query: 143 RRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSL 202
R I+ WNA+ R + ++ L +Y M + D FT+ ++LKAC G S
Sbjct: 81 RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQ--LARVSPDSFTFPHLLKAC----SGLSH 134
Query: 203 LKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAV--KNVVSWSAMI 260
L+ G+ +HA V R G++ V + LI +YA+ + A VF + + + +VSW+A++
Sbjct: 135 LQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIV 194
Query: 261 ACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRG 320
+ YA+NG EALE+F + M D+ P+ V +VSVL A L L+QG+ IH +++ G
Sbjct: 195 SAYAQNGEPMEALEIFSQ--MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMG 252
Query: 321 LDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFK 380
L+ ++ +L TMYA+CG++ + +FD M +++ WN++IS Y +GY +AI +F
Sbjct: 253 LEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFH 312
Query: 381 EMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRA 440
EMI V P IS S + AC+ G +E+ + ++E + + R V + ++D+ +
Sbjct: 313 EMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDY-RDDVFISSALIDMFAKC 371
Query: 441 NKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIH 472
+ E A+++ D ++ VW +++ +H
Sbjct: 372 GSV-EGARLVFDRTLDRDVVVWSAMIVGYGLH 402
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 457 bits (1175), Expect = e-127, Method: Compositional matrix adjust.
Identities = 238/630 (37%), Positives = 381/630 (60%), Gaps = 25/630 (3%)
Query: 46 SLSSRNKNELIQS------LCKQGNLRQAL-DVLSIEPNPTQHTYELLLLSCTHHNSLSD 98
S SS N ++Q+ LC G L++AL ++ + P H Y+ LL +C +L D
Sbjct: 11 SFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRD 70
Query: 99 ALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTL 158
VH+H+ + +L T+L+ Y D ++DAR V D+ + + W A+ +
Sbjct: 71 GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQ 130
Query: 159 AGRGEEVLELYRRMNGTGTGIRSD----RFTYTYVLKACVASSCGFSLLKHGKEIHASVL 214
G E L ++ M +RSD FT+ VL +C+ +S G L GK+IH ++
Sbjct: 131 TGHSSEALTVFAEM------MRSDGKPNEFTFATVLTSCIRAS-GLGL---GKQIHGLIV 180
Query: 215 RHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALE 274
+ Y+ + + ++L+DMYA+ G + A +F + ++VVS +A+IA YA+ G+ EALE
Sbjct: 181 KWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALE 240
Query: 275 LFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTM 334
+F + S + PN VT S+L A + LA L+ GK H ++LRR L + ++L+ M
Sbjct: 241 MFHRL--HSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDM 298
Query: 335 YARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHG-VSPSPIS 393
Y++CG L + +FD+M +R +SWN+++ Y HG G + +++F+ M V P ++
Sbjct: 299 YSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVT 358
Query: 394 FVSVLGACSHAGLVEEGKMLFESM-RKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIED 452
++VL CSH + + G +F+ M E+ +P EHY C+VD+LGRA +++EA + I+
Sbjct: 359 LLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKR 418
Query: 453 LRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEV 512
+ +P V GSLLG+CR+H +V++ E +RL E+EP NAGNYV+L+++YA+A W +V
Sbjct: 419 MPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADV 478
Query: 513 KRVKRLLEARGLQKVPGRSRIEVKRKMYSFVSVDEFHPQFEQLHALLINLSAEMKEKGYV 572
V+ ++ + + K PGRS I+ ++ ++ F + D HP+ E++ A + +S +MK+ GYV
Sbjct: 479 NNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYV 538
Query: 573 PQTKVVLYDLDAEEKERIVLGHSEKLAVAFGLINTSKGETIRITKNLRLCEDCHSFTKFI 632
P VLYD+D E+KE+++LGHSEKLA+ FGLI T +G IR+ KNLR+C DCH+F K
Sbjct: 539 PDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIF 598
Query: 633 SKFANKEILVRDVNRFHHFRNGVCSCGDYW 662
SK +E+ +RD NRFH +G+CSCGDYW
Sbjct: 599 SKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 453 bits (1166), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/614 (38%), Positives = 374/614 (60%), Gaps = 13/614 (2%)
Query: 53 NELIQSLCKQGNLRQALDVLS--IEPN--PTQHTYELLLLSCTHHNSLSDALNVHSHLTD 108
N ++ + G R AL+++ E N P+ T +L + + +S +H +
Sbjct: 205 NTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMR 264
Query: 109 NGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLEL 168
+GFD + T L+++Y+ S++ AR +FD R + WN++ A +E + +
Sbjct: 265 SGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLI 324
Query: 169 YRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTL 228
+++M G++ + L AC L+ G+ IH + G + V ++ +L
Sbjct: 325 FQKM--LDEGVKPTDVSVMGALHAC----ADLGDLERGRFIHKLSVELGLDRNVSVVNSL 378
Query: 229 IDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCP 288
I MY + V A +F ++ + +VSW+AMI +A+NG +AL F +M S + P
Sbjct: 379 ISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM--RSRTVKP 436
Query: 289 NSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVF 348
++ T VSV+ A A L+ K IHG ++R LD + V +ALV MYA+CG + + + +F
Sbjct: 437 DTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIF 496
Query: 349 DHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVE 408
D M +R V +WN++I YG HG+G A+++F+EM + P+ ++F+SV+ ACSH+GLVE
Sbjct: 497 DMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVE 556
Query: 409 EGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGS 468
G F M++ + I S++HY MVDLLGRA +L EA I + ++P V+G++LG+
Sbjct: 557 AGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGA 616
Query: 469 CRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQKVP 528
C+IH NV AE+A++RLFEL P + G +VLLA++Y AA MW++V +V+ + +GL+K P
Sbjct: 617 CQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTP 676
Query: 529 GRSRIEVKRKMYSFVSVDEFHPQFEQLHALLINLSAEMKEKGYVPQTKVVLYDLDAEEKE 588
G S +E+K +++SF S HP ++++A L L +KE GYVP T +VL ++ + KE
Sbjct: 677 GCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKE 735
Query: 589 RIVLGHSEKLAVAFGLINTSKGETIRITKNLRLCEDCHSFTKFISKFANKEILVRDVNRF 648
+++ HSEKLA++FGL+NT+ G TI + KNLR+C DCH+ TK+IS +EI+VRD+ RF
Sbjct: 736 QLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRF 795
Query: 649 HHFRNGVCSCGDYW 662
HHF+NG CSCGDYW
Sbjct: 796 HHFKNGACSCGDYW 809
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/340 (34%), Positives = 197/340 (57%), Gaps = 11/340 (3%)
Query: 74 IEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDD 133
I N +H LLL C+ SL + + + NG Q+ F TKL++++ + SVD+
Sbjct: 31 IPANVYEHPAALLLERCS---SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDE 87
Query: 134 ARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKAC 193
A VF+ + +++ + + ++ L+ + RM + + +TY+LK C
Sbjct: 88 AARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMR--YDDVEPVVYNFTYLLKVC 145
Query: 194 VASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNV 253
+ L+ GKEIH +++ G++ + MT L +MYA+ V A VF +M +++
Sbjct: 146 GDE----AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDL 201
Query: 254 VSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIH 313
VSW+ ++A Y++NGMA ALE+ + M E +L P+ +T+VSVL A +AL + GK IH
Sbjct: 202 VSWNTIVAGYSQNGMARMALEMVKSMCEE--NLKPSFITIVSVLPAVSALRLISVGKEIH 259
Query: 314 GYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGG 373
GY +R G DS++ + +ALV MYA+CG LE + +FD M +R+VVSWNS+I +Y +
Sbjct: 260 GYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPK 319
Query: 374 KAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKML 413
+A+ IF++M+ GV P+ +S + L AC+ G +E G+ +
Sbjct: 320 EAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 208/424 (49%), Gaps = 18/424 (4%)
Query: 55 LIQSLCKQGNLRQALDVL------SIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTD 108
+++ K +L +AL +EP TY LL C L +H L
Sbjct: 106 MLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTY--LLKVCGDEAELRVGKEIHGLLVK 163
Query: 109 NGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLEL 168
+GF D F +T L N+Y+ V++AR VFD+ R + WN + + G LE+
Sbjct: 164 SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEM 223
Query: 169 YRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTL 228
+ M ++ T VL A A L+ GKEIH +R G++ +V+I T L
Sbjct: 224 VKSM--CEENLKPSFITIVSVLPAVSA----LRLISVGKEIHGYAMRSGFDSLVNISTAL 277
Query: 229 IDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCP 288
+DMYA+ G + A +F M +NVVSW++MI Y +N EA+ +F++M+ E + P
Sbjct: 278 VDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG--VKP 335
Query: 289 NSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVF 348
V+++ L ACA L LE+G+ IH + GLD + VV++L++MY +C +++ +F
Sbjct: 336 TDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMF 395
Query: 349 DHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVE 408
+ R +VSWN++I + +G A+ F +M V P ++VSV+ A + +
Sbjct: 396 GKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITH 455
Query: 409 EGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGS 468
K + + + + + +V +VD+ + + A++I D+ E W +++
Sbjct: 456 HAKWIHGVVMRSCLDK-NVFVTTALVDMYAKCGAI-MIARLIFDMMSERHVTTWNAMIDG 513
Query: 469 CRIH 472
H
Sbjct: 514 YGTH 517
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 154/313 (49%), Gaps = 11/313 (3%)
Query: 201 SLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMI 260
S LK ++I V ++G T L+ ++ R+G V A VF + K V + M+
Sbjct: 48 SSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTML 107
Query: 261 ACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRG 320
+A+ +AL+ F M + D+ P +L+ C A L GK IHG +++ G
Sbjct: 108 KGFAKVSDLDKALQFFVRMRYD--DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSG 165
Query: 321 LDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFK 380
L ++ L MYA+C ++ + VFD M +RD+VSWN++++ Y +G A+++ K
Sbjct: 166 FSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVK 225
Query: 381 EMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFE-SMRKEHMIRPSVEHYACMVDLLGR 439
M + PS I+ VSVL A S L+ GK + +MR V +VD+ +
Sbjct: 226 SMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSG--FDSLVNISTALVDMYAK 283
Query: 440 ANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFE--LEPTNAGNYV 497
LE A ++ + + +E W S++ + + N + A +++ + ++PT+
Sbjct: 284 CGSLETARQLFDGM-LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS--- 339
Query: 498 LLADVYAAADMWD 510
++ ++A AD+ D
Sbjct: 340 VMGALHACADLGD 352
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 448 bits (1153), Expect = e-125, Method: Compositional matrix adjust.
Identities = 256/693 (36%), Positives = 385/693 (55%), Gaps = 73/693 (10%)
Query: 38 LNSSTTPTSLSSRNKNELIQSLCKQGNLRQALDVLSIEPN----PTQHTYELLLLSCTHH 93
L S PT S + LI +L K Q++ V S + P H L C
Sbjct: 73 LQSIPDPTIYSF---SSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAEL 129
Query: 94 NSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALF 153
++ +H +G D D F+ + ++Y + DAR VFD+ + + +AL
Sbjct: 130 SAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALL 189
Query: 154 RALTLAGRGEEVLELYRRMNGTG--------TGIRSD--------------------RFT 185
A G EEV+ + M +G GI S F
Sbjct: 190 CAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFC 249
Query: 186 YTYVLKACVASSCGFS-LLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCV------ 238
V + V S G S +L G+ IH V++ G +++ +IDMY + G V
Sbjct: 250 PDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISL 309
Query: 239 ------MYAGF----------------------VFSQMAVK-NVVSWSAMIACYARNGMA 269
M AG +F + ++ NVVSW+++IA A+NG
Sbjct: 310 FNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKD 369
Query: 270 FEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVS 329
EALELFREM + + PN VT+ S+L AC +AAL G+ HG+ +R L + V S
Sbjct: 370 IEALELFREM--QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGS 427
Query: 330 ALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSP 389
AL+ MYA+CG++ L Q VF+ M +++V WNSL++ + +HG + + IF+ ++ + P
Sbjct: 428 ALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKP 487
Query: 390 SPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKI 449
ISF S+L AC GL +EG F+ M +E+ I+P +EHY+CMV+LLGRA KL+EA +
Sbjct: 488 DFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDL 547
Query: 450 IEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMW 509
I+++ EP VWG+LL SCR+ NV+LAE A+++LF LEP N G YVLL+++YAA MW
Sbjct: 548 IKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMW 607
Query: 510 DEVKRVKRLLEARGLQKVPGRSRIEVKRKMYSFVSVDEFHPQFEQLHALLINLSAEMKEK 569
EV ++ +E+ GL+K PG S I+VK ++Y+ ++ D+ HPQ +Q+ + +S EM++
Sbjct: 608 TEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKS 667
Query: 570 GYVPQTKVVLYDLDAEEKERIVLGHSEKLAVAFGLINTSKGETIRITKNLRLCEDCHSFT 629
G+ P L+D++ +E+E+++ GHSEKLAV FGL+NT G +++ KNLR+C DCH+
Sbjct: 668 GHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVI 727
Query: 630 KFISKFANKEILVRDVNRFHHFRNGVCSCGDYW 662
KFIS +A +EI +RD NRFHHF++G+CSCGD+W
Sbjct: 728 KFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 191/438 (43%), Gaps = 76/438 (17%)
Query: 103 HSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRG 162
H+ + +G D ++ KLI YS+++ +DA V TIY +++L ALT A
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 163 EEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIV 222
+ + ++ RM G+ D + K C S K GK+IH G +
Sbjct: 98 TQSIGVFSRM--FSHGLIPDSHVLPNLFKVCAE----LSAFKVGKQIHCVSCVSGLDMDA 151
Query: 223 HIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFRE---- 278
+ ++ MY R G + A VF +M+ K+VV+ SA++ YAR G E + + E
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 279 ---------------------------MIMESHDL--CPNSVTMVSVLQACAALAALEQG 309
M + H L CP+ VT+ SVL + L G
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271
Query: 310 KMIHGYILRRGLDSILPVVSALVTMYARCGK-------------LELGQC---------- 346
++IHGY++++GL V+SA++ MY + G +E G C
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 347 --------VFDHMDKR----DVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISF 394
+F+ ++ +VVSW S+I+ +G +A+++F+EM GV P+ ++
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 395 VSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLR 454
S+L AC + + G+ + H++ +V + ++D+ + ++ ++I+ ++
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLL-DNVHVGSALIDMYAKCGRI-NLSQIVFNMM 449
Query: 455 IEPGPKVWGSLLGSCRIH 472
W SL+ +H
Sbjct: 450 PTKNLVCWNSLMNGFSMH 467
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 107/210 (50%), Gaps = 2/210 (0%)
Query: 208 EIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNG 267
+ HA +L+ G +I LI Y+ + C A V + + S+S++I +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 268 MAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPV 327
+ +++ +F M SH L P+S + ++ + CA L+A + GK IH GLD V
Sbjct: 96 LFTQSIGVFSRMF--SHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV 153
Query: 328 VSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGV 387
++ MY RCG++ + VFD M +DVV+ ++L+ +Y G + ++I EM G+
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213
Query: 388 SPSPISFVSVLGACSHAGLVEEGKMLFESM 417
+ +S+ +L + +G +E ++F+ +
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKI 243
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 446 bits (1147), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/619 (38%), Positives = 358/619 (57%), Gaps = 50/619 (8%)
Query: 53 NELIQSLCKQGNLRQALDVLSI----EPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTD 108
N +I+S G + + V P +T+ +L +C+ ++ +H T
Sbjct: 109 NVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK 168
Query: 109 NGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLEL 168
G F+ L+++Y + +AR V D+ RR + WN+L R ++ LE+
Sbjct: 169 VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEV 228
Query: 169 YRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTL 228
R M + H AS+L N TT
Sbjct: 229 CREMESVK--------------------------ISHDAGTMASLLPAVSN------TTT 256
Query: 229 IDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCP 288
+ VMY +F +M K++VSW+ MI Y +N M EA+EL+ M E+ P
Sbjct: 257 EN-------VMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRM--EADGFEP 307
Query: 289 NSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVF 348
++V++ SVL AC +AL GK IHGYI R+ L L + +AL+ MYA+CG LE + VF
Sbjct: 308 DAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVF 367
Query: 349 DHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVE 408
++M RDVVSW ++IS+YG G G A+ +F ++ G+ P I+FV+ L ACSHAGL+E
Sbjct: 368 ENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLE 427
Query: 409 EGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGS 468
EG+ F+ M + I P +EH ACMVDLLGRA K++EA + I+D+ +EP +VWG+LLG+
Sbjct: 428 EGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGA 487
Query: 469 CRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQKVP 528
CR+H + ++ A+ +LF+L P +G YVLL+++YA A W+EV ++ +++++GL+K P
Sbjct: 488 CRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNP 547
Query: 529 GRSRIEVKRKMYSFVSVDEFHPQFEQLHALLINLSAEMKEKGYVPQTKVVLYDLDAEEKE 588
G S +EV R +++F+ D HPQ ++++ L L +MKE GYVP ++ L+D++ E+KE
Sbjct: 548 GASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKE 607
Query: 589 RIVLGHSEKLAVAFGLINTSKGE-----TIRITKNLRLCEDCHSFTKFISKFANKEILVR 643
+ HSEKLA+ F L+NT + E TIRITKNLR+C DCH K IS+ ++EI++R
Sbjct: 608 THLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIR 667
Query: 644 DVNRFHHFRNGVCSCGDYW 662
D NRFH FR GVCSCGDYW
Sbjct: 668 DTNRFHVFRFGVCSCGDYW 686
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 154/342 (45%), Gaps = 22/342 (6%)
Query: 38 LNSSTTPTSLSSR--NKNELIQSLCKQGNLRQALDVLSIEPNPTQHTYELLLLSCTHHNS 95
++ S T LSS N L+ K G L +A VL ++ L++ +
Sbjct: 162 IHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQR 221
Query: 96 LSDALNVHSHLTDNGFDQDPFLVTKLINVYSHF--DSVDDARHVFDKTRRRTIYVWNALF 153
DAL V + D + L+ S+ ++V + +F K ++++ WN +
Sbjct: 222 FDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMI 281
Query: 154 RALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASV 213
E +ELY RM G D + T VL AC +S L GK+IH +
Sbjct: 282 GVYMKNAMPVEAVELYSRMEADG--FEPDAVSITSVLPACGDTSA----LSLGKKIHGYI 335
Query: 214 LRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEAL 273
R + + LIDMYA+ GC+ A VF M ++VVSW+AMI+ Y +G +A+
Sbjct: 336 ERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAV 395
Query: 274 ELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGK-----MIHGYILRRGLDSILPVV 328
LF + ++ L P+S+ V+ L AC+ LE+G+ M Y + L+ +
Sbjct: 396 ALFSK--LQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHL---- 449
Query: 329 SALVTMYARCGKL-ELGQCVFDHMDKRDVVSWNSLISSYGVH 369
+ +V + R GK+ E + + D + + W +L+ + VH
Sbjct: 450 ACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVH 491
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 99/198 (50%), Gaps = 2/198 (1%)
Query: 207 KEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARN 266
+ +H+ ++ + L+ YA V A VF ++ +NV+ + MI Y N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 267 GMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILP 326
G E +++F M ++ P+ T VL+AC+ + G+ IHG + GL S L
Sbjct: 119 GFYGEGVKVFGTMC--GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLF 176
Query: 327 VVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHG 386
V + LV+MY +CG L + V D M +RDVVSWNSL+ Y + A+++ +EM
Sbjct: 177 VGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVK 236
Query: 387 VSPSPISFVSVLGACSHA 404
+S + S+L A S+
Sbjct: 237 ISHDAGTMASLLPAVSNT 254
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 446 bits (1146), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/632 (38%), Positives = 372/632 (58%), Gaps = 50/632 (7%)
Query: 69 LDVLSIEPNPTQHTYELLLLSCTHHNSLSDAL-NVHSHLTDNGFDQDPFLVTKLINV--- 124
++V+S + + YE + SC S + L +H+ + G QD + +TK ++
Sbjct: 1 MNVISCSFSLEHNLYETM--SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCIS 58
Query: 125 YSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRF 184
+ D + A+ VFD R ++WN + R + + E L LY+RM + + +
Sbjct: 59 STSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRM--LCSSAPHNAY 116
Query: 185 TYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYA--- 241
T+ +LKAC S + +IHA + + GY V+ + +LI+ YA G A
Sbjct: 117 TFPSLLKAC----SNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLL 172
Query: 242 -----------------GFV-----------FSQMAVKNVVSWSAMIACYARNGMAFEAL 273
G+V F +MA KN +SW+ MI+ Y + M EAL
Sbjct: 173 FDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEAL 232
Query: 274 ELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYI--LRRGLDSILPVVSAL 331
+LF EM ++ D+ P++V++ + L ACA L ALEQGK IH Y+ R +DS+L V L
Sbjct: 233 QLFHEM--QNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCV--L 288
Query: 332 VTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSP 391
+ MYA+CG++E VF ++ K+ V +W +LIS Y HG+G +AI F EM G+ P+
Sbjct: 289 IDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNV 348
Query: 392 ISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIE 451
I+F +VL ACS+ GLVEEGK++F SM +++ ++P++EHY C+VDLLGRA L+EA + I+
Sbjct: 349 ITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQ 408
Query: 452 DLRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDE 511
++ ++P +WG+LL +CRIH N+EL E + L ++P + G YV A+++A WD+
Sbjct: 409 EMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDK 468
Query: 512 VKRVKRLLEARGLQKVPGRSRIEVKRKMYSFVSVDEFHPQFEQLHALLINLSAEMKEKGY 571
+RL++ +G+ KVPG S I ++ + F++ D HP+ E++ + + +++E GY
Sbjct: 469 AAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGY 528
Query: 572 VPQTKVVLYDL-DAEEKERIVLGHSEKLAVAFGLINTSKGETIRITKNLRLCEDCHSFTK 630
VP+ + +L DL D +E+E IV HSEKLA+ +GLI T G IRI KNLR+C+DCH TK
Sbjct: 529 VPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTK 588
Query: 631 FISKFANKEILVRDVNRFHHFRNGVCSCGDYW 662
ISK ++I++RD RFHHFR+G CSCGDYW
Sbjct: 589 LISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 443 bits (1140), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/639 (36%), Positives = 355/639 (55%), Gaps = 36/639 (5%)
Query: 54 ELIQSLCKQGNLRQALDVLSIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQ 113
E I LC Q LR+A+ +L P TY L+ C+ +L + VH H+ +GF
Sbjct: 59 EAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVP 118
Query: 114 DPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMN 173
+ +L+ +Y+ S+ DAR VFD+ R + WN + G EE +L+ M
Sbjct: 119 GIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMT 178
Query: 174 GTG--------TGI----------------------RSDRFTYTYVLKACVASSCGFSLL 203
TG R + FT + + A A C +
Sbjct: 179 EKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKC----I 234
Query: 204 KHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACY 263
+ GKEIH ++R G + + ++L+DMY + GC+ A +F ++ K+VVSW++MI Y
Sbjct: 235 RRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRY 294
Query: 264 ARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDS 323
++ E LF E++ PN T VL ACA L E GK +HGY+ R G D
Sbjct: 295 FKSSRWREGFSLFSELVGSCER--PNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDP 352
Query: 324 ILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMI 383
S+LV MY +CG +E + V D K D+VSW SLI +G +A++ F ++
Sbjct: 353 YSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLL 412
Query: 384 YHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKL 443
G P ++FV+VL AC+HAGLVE+G F S+ ++H + + +HY C+VDLL R+ +
Sbjct: 413 KSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRF 472
Query: 444 EEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVY 503
E+ +I ++ ++P +W S+LG C + N++LAE A++ LF++EP N YV +A++Y
Sbjct: 473 EQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIY 532
Query: 504 AAADMWDEVKRVKRLLEARGLQKVPGRSRIEVKRKMYSFVSVDEFHPQFEQLHALLINLS 563
AAA W+E ++++ ++ G+ K PG S E+KRK + F++ D HP + Q+ L L
Sbjct: 533 AAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELR 592
Query: 564 AEMKEKGYVPQTKVVLYDLDAEEKERIVLGHSEKLAVAFGLINTSKGETIRITKNLRLCE 623
+MKE+GYVP T +VL+D++ E+KE ++ HSEKLAVAF +++T +G I++ KNLR C
Sbjct: 593 KKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCV 652
Query: 624 DCHSFTKFISKFANKEILVRDVNRFHHFRNGVCSCGDYW 662
DCH KFIS ++I VRD RFH F NG CSCGDYW
Sbjct: 653 DCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 441 bits (1134), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/623 (37%), Positives = 369/623 (59%), Gaps = 10/623 (1%)
Query: 41 STTPTSLSSRNKNELIQSLCKQGNLRQALDVLSIEPNPT-QHTYELLLLSCTHHNSLSDA 99
++ P +S +++E ++ LR + + L P + Y LL CT L
Sbjct: 20 NSLPAPVSEDSEDESLKFPSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQG 79
Query: 100 LNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLA 159
VH+H+ + F D + L+N+Y+ S+++AR VF+K +R W L +
Sbjct: 80 RIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQH 139
Query: 160 GRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYN 219
R + L + +M G + FT + V+KA A G G ++H ++ G++
Sbjct: 140 DRPCDALLFFNQM--LRFGYSPNEFTLSSVIKAAAAERRGCC----GHQLHGFCVKCGFD 193
Query: 220 GIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREM 279
VH+ + L+D+Y R+G + A VF + +N VSW+A+IA +AR +ALELF+ M
Sbjct: 194 SNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGM 253
Query: 280 IMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCG 339
+ + P+ + S+ AC++ LEQGK +H Y+++ G + + L+ MYA+ G
Sbjct: 254 LRDG--FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSG 311
Query: 340 KLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLG 399
+ + +FD + KRDVVSWNSL+++Y HG+G +A+ F+EM G+ P+ ISF+SVL
Sbjct: 312 SIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLT 371
Query: 400 ACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGP 459
ACSH+GL++EG +E M+K+ ++ P HY +VDLLGRA L A + IE++ IEP
Sbjct: 372 ACSHSGLLDEGWHYYELMKKDGIV-PEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTA 430
Query: 460 KVWGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLL 519
+W +LL +CR+H N EL A++ +FEL+P + G +V+L ++YA+ W++ RV++ +
Sbjct: 431 AIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKM 490
Query: 520 EARGLQKVPGRSRIEVKRKMYSFVSVDEFHPQFEQLHALLINLSAEMKEKGYVPQTKVVL 579
+ G++K P S +E++ ++ FV+ DE HPQ E++ + A++KE GYVP T V+
Sbjct: 491 KESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVI 550
Query: 580 YDLDAEEKERIVLGHSEKLAVAFGLINTSKGETIRITKNLRLCEDCHSFTKFISKFANKE 639
+D +E+E + HSEK+A+AF L+NT G TI I KN+R+C DCH+ K SK +E
Sbjct: 551 VHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGRE 610
Query: 640 ILVRDVNRFHHFRNGVCSCGDYW 662
I+VRD NRFHHF++G CSC DYW
Sbjct: 611 IIVRDTNRFHHFKDGNCSCKDYW 633
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 437 bits (1124), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/617 (38%), Positives = 365/617 (59%), Gaps = 18/617 (2%)
Query: 53 NELIQSLCKQGNLRQALDV-LSIEPNPTQ---HTYELLLLSCTHHNSLSDALNVHSHLTD 108
N LI + LD+ LSI + T+ L+L +CT +S +++HS +
Sbjct: 80 NSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVK 139
Query: 109 NGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLEL 168
GF+ D +T L+++YS ++DA +FD+ R++ W ALF T +GR E ++L
Sbjct: 140 CGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDL 199
Query: 169 YRRMNGTGTGIRSDRFTYTYVLKACVASS---CGFSLLKHGKEIHASVLRHGYNGIVHIM 225
+++M G++ D + VL ACV G ++K+ +E+ N V
Sbjct: 200 FKKM--VEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQ-----KNSFVR-- 250
Query: 226 TTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHD 285
TTL+++YA+ G + A VF M K++V+WS MI YA N E +ELF +M+ E +
Sbjct: 251 TTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQE--N 308
Query: 286 LCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQ 345
L P+ ++V L +CA+L AL+ G+ I R + L + +AL+ MYA+CG + G
Sbjct: 309 LKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGF 368
Query: 346 CVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAG 405
VF M ++D+V N+ IS +G+ + +F + G+SP +F+ +L C HAG
Sbjct: 369 EVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAG 428
Query: 406 LVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSL 465
L+++G F ++ + ++ +VEHY CMVDL GRA L++A ++I D+ + P VWG+L
Sbjct: 429 LIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGAL 488
Query: 466 LGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQ 525
L CR+ + +LAE K L LEP NAGNYV L+++Y+ WDE V+ ++ +G++
Sbjct: 489 LSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMK 548
Query: 526 KVPGRSRIEVKRKMYSFVSVDEFHPQFEQLHALLINLSAEMKEKGYVPQTKVVLYDLDAE 585
K+PG S IE++ K++ F++ D+ HP ++++A L +L EM+ G+VP T+ V +D++ E
Sbjct: 549 KIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEE 608
Query: 586 EKERIVLGHSEKLAVAFGLINTSKGETIRITKNLRLCEDCHSFTKFISKFANKEILVRDV 645
EKER++ HSEKLAVA GLI+T G+ IR+ KNLR+C DCH K ISK +EI+VRD
Sbjct: 609 EKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDN 668
Query: 646 NRFHHFRNGVCSCGDYW 662
NRFH F NG CSC DYW
Sbjct: 669 NRFHCFTNGSCSCNDYW 685
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 192/378 (50%), Gaps = 13/378 (3%)
Query: 77 NPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARH 136
+ Q L+ ++CT ++ +H L ++ D FLV L+ F +
Sbjct: 11 SKVQQIKTLISVACT----VNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYL 66
Query: 137 VFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVAS 196
+F T+ I+++N+L E L+L+ + G + FT+ VLKAC +
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHG--FTFPLVLKACTRA 124
Query: 197 SCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSW 256
S K G ++H+ V++ G+N V MT+L+ +Y+ G + A +F ++ ++VV+W
Sbjct: 125 SSR----KLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTW 180
Query: 257 SAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYI 316
+A+ + Y +G EA++LF++M+ + P+S +V VL AC + L+ G+ I Y+
Sbjct: 181 TALFSGYTTSGRHREAIDLFKKMV--EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM 238
Query: 317 LRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAI 376
+ V + LV +YA+CGK+E + VFD M ++D+V+W+++I Y + + + I
Sbjct: 239 EEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGI 298
Query: 377 QIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDL 436
++F +M+ + P S V L +C+ G ++ G+ S+ H ++ ++D+
Sbjct: 299 ELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGI-SLIDRHEFLTNLFMANALIDM 357
Query: 437 LGRANKLEEAAKIIEDLR 454
+ + ++ ++++
Sbjct: 358 YAKCGAMARGFEVFKEMK 375
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 140/277 (50%), Gaps = 7/277 (2%)
Query: 190 LKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMA 249
+K ++ +C + H K+IH S++ H + ++ L+ F Y+ +FS
Sbjct: 16 IKTLISVAC---TVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQ 72
Query: 250 VKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQG 309
N+ ++++I + N + E L+LF + + H L + T VL+AC ++ + G
Sbjct: 73 FPNIFLYNSLINGFVNNHLFHETLDLF--LSIRKHGLYLHGFTFPLVLKACTRASSRKLG 130
Query: 310 KMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVH 369
+H +++ G + + +++L+++Y+ G+L +FD + R VV+W +L S Y
Sbjct: 131 IDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTS 190
Query: 370 GYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEH 429
G +AI +FK+M+ GV P V VL AC H G ++ G+ + + M + M + S
Sbjct: 191 GRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVR 250
Query: 430 YACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLL 466
+V+L + K+E+A + + + +E W +++
Sbjct: 251 -TTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMI 285
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 434 bits (1117), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/618 (36%), Positives = 361/618 (58%), Gaps = 41/618 (6%)
Query: 78 PTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHV 137
P +T+ +L SC + + +H H+ G D D ++ T LI++Y ++DA V
Sbjct: 132 PNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKV 191
Query: 138 FDKTRRRTI--------------YV-----------------WNALFRALTLAGRGEEVL 166
FDK+ R + Y+ WNA+ G +E L
Sbjct: 192 FDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEAL 251
Query: 167 ELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMT 226
EL++ M T +R D T V+ AC S ++ G+++H + HG+ + I+
Sbjct: 252 ELFKDM--MKTNVRPDESTMVTVVSACAQSGS----IELGRQVHLWIDDHGFGSNLKIVN 305
Query: 227 TLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDL 286
LID+Y++ G + A +F ++ K+V+SW+ +I Y + EAL LF+EM+
Sbjct: 306 ALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-- 363
Query: 287 CPNSVTMVSVLQACAALAALEQGKMIHGYILRR--GLDSILPVVSALVTMYARCGKLELG 344
PN VTM+S+L ACA L A++ G+ IH YI +R G+ + + ++L+ MYA+CG +E
Sbjct: 364 TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAA 423
Query: 345 QCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHA 404
VF+ + + + SWN++I + +HG + +F M G+ P I+FV +L ACSH+
Sbjct: 424 HQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHS 483
Query: 405 GLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGS 464
G+++ G+ +F +M +++ + P +EHY CM+DLLG + +EA ++I + +EP +W S
Sbjct: 484 GMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCS 543
Query: 465 LLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEARGL 524
LL +C++H NVEL E ++ L ++EP N G+YVLL+++YA+A W+EV + + LL +G+
Sbjct: 544 LLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGM 603
Query: 525 QKVPGRSRIEVKRKMYSFVSVDEFHPQFEQLHALLINLSAEMKEKGYVPQTKVVLYDLDA 584
+KVPG S IE+ ++ F+ D+FHP+ +++ +L + +++ G+VP T VL +++
Sbjct: 604 KKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEE 663
Query: 585 EEKERIVLGHSEKLAVAFGLINTSKGETIRITKNLRLCEDCHSFTKFISKFANKEILVRD 644
E KE + HSEKLA+AFGLI+T G + I KNLR+C +CH TK ISK +EI+ RD
Sbjct: 664 EWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARD 723
Query: 645 VNRFHHFRNGVCSCGDYW 662
RFHHFR+GVCSC DYW
Sbjct: 724 RTRFHHFRDGVCSCNDYW 741
Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 199/387 (51%), Gaps = 43/387 (11%)
Query: 102 VHSHLTDNGFDQDPFLVTKLIN---VYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTL 158
+H+ + G + ++KLI + HF+ + A VF + + +WN +FR L
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111
Query: 159 AGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGY 218
+ L+LY M G+ + +T+ +VLK+C S K G++IH VL+ G
Sbjct: 112 SSDPVSALKLYVCM--ISLGLLPNSYTFPFVLKSCAKSKA----FKEGQQIHGHVLKLGC 165
Query: 219 NGIVHIMTTLIDMYARFG----------------CVMYAGFV---------------FSQ 247
+ +++ T+LI MY + G V Y + F +
Sbjct: 166 DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDE 225
Query: 248 MAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALE 307
+ VK+VVSW+AMI+ YA G EALELF++M+ ++ P+ TMV+V+ ACA ++E
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT--NVRPDESTMVTVVSACAQSGSIE 283
Query: 308 QGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYG 367
G+ +H +I G S L +V+AL+ +Y++CG+LE +F+ + +DV+SWN+LI Y
Sbjct: 284 LGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYT 343
Query: 368 VHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKE-HMIRPS 426
+A+ +F+EM+ G +P+ ++ +S+L AC+H G ++ G+ + + K + +
Sbjct: 344 HMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNA 403
Query: 427 VEHYACMVDLLGRANKLEEAAKIIEDL 453
++D+ + +E A ++ +
Sbjct: 404 SSLRTSLIDMYAKCGDIEAAHQVFNSI 430
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 171/402 (42%), Gaps = 49/402 (12%)
Query: 53 NELIQSLCKQGNLRQAL----DVLSIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTD 108
N +I + GN ++AL D++ P + T ++ +C S+ VH + D
Sbjct: 235 NAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDD 294
Query: 109 NGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLEL 168
+GF + +V LI++YS ++ A +F++ + + WN L T +E L L
Sbjct: 295 HGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLL 354
Query: 169 YRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRH--GYNGIVHIMT 226
++ M +G + T +L AC + G+ IH + + G + T
Sbjct: 355 FQEMLRSGE--TPNDVTMLSILPACAH----LGAIDIGRWIHVYIDKRLKGVTNASSLRT 408
Query: 227 TLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDL 286
+LIDMYA+ G + A VF+ + K++ SW+AMI +A +G A + +LF M +
Sbjct: 409 SLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSR--MRKIGI 466
Query: 287 CPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQC 346
P+ +T V +L AC+ L+ G+ +I R + Y KLE C
Sbjct: 467 QPDDITFVGLLSACSHSGMLDLGR----HIFR-----------TMTQDYKMTPKLEHYGC 511
Query: 347 VFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGL 406
+ D + G+ G + + + + P + + S+L AC G
Sbjct: 512 MIDLL------------------GHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGN 553
Query: 407 VEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAK 448
VE G+ E++ K P Y + ++ A + E AK
Sbjct: 554 VELGESFAENLIKIEPENPG--SYVLLSNIYASAGRWNEVAK 593
Score = 39.7 bits (91), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 294 VSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALV---TMYARCGKLELGQCVFDH 350
+S+L C L +L ++IH +++ GL + +S L+ + L VF
Sbjct: 37 LSLLHNCKTLQSL---RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKT 93
Query: 351 MDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEG 410
+ + +++ WN++ + + A++++ MI G+ P+ +F VL +C+ + +EG
Sbjct: 94 IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEG 153
Query: 411 KML 413
+ +
Sbjct: 154 QQI 156
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 434 bits (1115), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/542 (39%), Positives = 341/542 (62%), Gaps = 16/542 (2%)
Query: 121 LINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIR 180
+I Y+ +D+AR +FD++ + ++ W A+ EE EL+ +M
Sbjct: 256 IITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM-------- 307
Query: 181 SDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMY 240
+R ++ A +A ++ KE+ + V T+I YA+ G +
Sbjct: 308 PERNEVSW--NAMLAGYVQGERMEMAKELFDVMPCRN----VSTWNTMITGYAQCGKISE 361
Query: 241 AGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQAC 300
A +F +M ++ VSW+AMIA Y+++G +FEAL LF +M E L N + S L C
Sbjct: 362 AKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRL--NRSSFSSALSTC 419
Query: 301 AALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWN 360
A + ALE GK +HG +++ G ++ V +AL+ MY +CG +E +F M +D+VSWN
Sbjct: 420 ADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWN 479
Query: 361 SLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKE 420
++I+ Y HG+G A++ F+ M G+ P + V+VL ACSH GLV++G+ F +M ++
Sbjct: 480 TMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQD 539
Query: 421 HMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAER 480
+ + P+ +HYACMVDLLGRA LE+A +++++ EP +WG+LLG+ R+H N ELAE
Sbjct: 540 YGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAET 599
Query: 481 ASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQKVPGRSRIEVKRKMY 540
A+ ++F +EP N+G YVLL+++YA++ W +V +++ + +G++KVPG S IE++ K +
Sbjct: 600 AADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTH 659
Query: 541 SFVSVDEFHPQFEQLHALLINLSAEMKEKGYVPQTKVVLYDLDAEEKERIVLGHSEKLAV 600
+F DEFHP+ +++ A L L MK+ GYV +T VVL+D++ EEKER+V HSE+LAV
Sbjct: 660 TFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAV 719
Query: 601 AFGLINTSKGETIRITKNLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRNGVCSCGD 660
A+G++ S G IR+ KNLR+CEDCH+ K++++ + I++RD NRFHHF++G CSCGD
Sbjct: 720 AYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGD 779
Query: 661 YW 662
YW
Sbjct: 780 YW 781
Score = 112 bits (280), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 167/372 (44%), Gaps = 40/372 (10%)
Query: 48 SSRNKNELIQSLCKQGNLRQALDVLSIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLT 107
SS + N +I + G A + P ++ +++ + +L A + +
Sbjct: 94 SSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMP 153
Query: 108 DNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLE 167
+ +D +++ Y+ VDDAR VFD+ + WNAL A + EE
Sbjct: 154 E----RDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACM 209
Query: 168 LYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYN-GIVHIMT 226
L++ R + V C+ GF +K K + A N V
Sbjct: 210 LFK-----------SRENWALVSWNCLLG--GF--VKKKKIVEARQFFDSMNVRDVVSWN 254
Query: 227 TLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDL 286
T+I YA+ G + A +F + V++V +W+AM++ Y +N M EA ELF +M E +++
Sbjct: 255 TIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP-ERNEV 313
Query: 287 CPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILP-----VVSALVTMYARCGKL 341
N A LA QG+ + + + L ++P + ++T YA+CGK+
Sbjct: 314 SWN-----------AMLAGYVQGERME---MAKELFDVMPCRNVSTWNTMITGYAQCGKI 359
Query: 342 ELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGAC 401
+ +FD M KRD VSW ++I+ Y G+ +A+++F +M G + SF S L C
Sbjct: 360 SEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTC 419
Query: 402 SHAGLVEEGKML 413
+ +E GK L
Sbjct: 420 ADVVALELGKQL 431
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 148/353 (41%), Gaps = 67/353 (18%)
Query: 146 IYVWNALFRALTLAGRGEEVLELYRRM--------NGTGTG-IRSDRFTYTYVLKACVAS 196
I WN + GR E L +++RM NG +G +R+ F L
Sbjct: 64 IKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKL------ 117
Query: 197 SCGFSLLKHGKEIHASVLRHGY---------NGIVHIM--------TTLIDMYARFGCVM 239
F + + +V+ GY + IM T++ YA+ GCV
Sbjct: 118 ---FDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVD 174
Query: 240 YAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQA 299
A VF +M KN VSW+A+++ Y +N EA LF+ + V
Sbjct: 175 DARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK-----------SRENWALVSWN 223
Query: 300 CAALAALEQGKMIHGYILRRGLDS--ILPVVS--ALVTMYARCGKLELGQCVFDHMDKRD 355
C +++ K++ R+ DS + VVS ++T YA+ GK++ + +FD +D
Sbjct: 224 CLLGGFVKKKKIVEA---RQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQD 280
Query: 356 VVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFE 415
V +W +++S Y + +A ++F +M + +S+ ++L +E K LF+
Sbjct: 281 VFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMAKELFD 336
Query: 416 SMRKEHMIRP--SVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLL 466
M P +V + M+ + K+ EA + + + + P W +++
Sbjct: 337 VM-------PCRNVSTWNTMITGYAQCGKISEAKNLFDKM-PKRDPVSWAAMI 381
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 123/293 (41%), Gaps = 33/293 (11%)
Query: 252 NVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKM 311
++ W+ I+ Y R G EAL +F+ M S SV+ ++ E +
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWS------SVSYNGMISGYLRNGEFELARK 116
Query: 312 IHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGY 371
+ + R L S + ++ Y R L + +F+ M +RDV SWN+++S Y +G
Sbjct: 117 LFDEMPERDLVSW----NVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGC 172
Query: 372 GGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYA 431
A +F M + +S+ ++L A +EE MLF+S ++ +
Sbjct: 173 VDDARSVFDRM----PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALV-----SWN 223
Query: 432 CMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFELEPT 491
C++ + K+ EA + + + + W +++ ++ A ++LF+ P
Sbjct: 224 CLLGGFVKKKKIVEARQFFDSMNVRDVVS-WNTIITGYAQSGKIDEA----RQLFDESP- 277
Query: 492 NAGNYVLLADVYAAADMWDEVKRVKRLLEARGL-QKVPGRSRIEVKRKMYSFV 543
+ DV+ M + + + EAR L K+P R+ + + +V
Sbjct: 278 -------VQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYV 323
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
Query: 79 TQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHVF 138
+ ++ L +C +L +H L G++ F+ L+ +Y S+++A +F
Sbjct: 408 NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLF 467
Query: 139 DKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKAC 193
+ + I WN + + G GE L + M G++ D T VL AC
Sbjct: 468 KEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMK--REGLKPDDATMVAVLSAC 520
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 432 bits (1110), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/531 (39%), Positives = 338/531 (63%), Gaps = 9/531 (1%)
Query: 134 ARHVFDKTRRR-TIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKA 192
A VF K + +++WN L R G LYR M +G + D TY +++KA
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGL-VEPDTHTYPFLIKA 130
Query: 193 CVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKN 252
+ ++ G+ IH+ V+R G+ ++++ +L+ +YA G V A VF +M K+
Sbjct: 131 VTT----MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKD 186
Query: 253 VVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMI 312
+V+W+++I +A NG EAL L+ EM S + P+ T+VS+L ACA + AL GK +
Sbjct: 187 LVAWNSVINGFAENGKPEEALALYTEM--NSKGIKPDGFTIVSLLSACAKIGALTLGKRV 244
Query: 313 HGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYG 372
H Y+++ GL L + L+ +YARCG++E + +FD M ++ VSW SLI V+G+G
Sbjct: 245 HVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFG 304
Query: 373 GKAIQIFKEM-IYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYA 431
+AI++FK M G+ P I+FV +L ACSH G+V+EG F MR+E+ I P +EH+
Sbjct: 305 KEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFG 364
Query: 432 CMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFELEPT 491
CMVDLL RA ++++A + I+ + ++P +W +LLG+C +H + +LAE A ++ +LEP
Sbjct: 365 CMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPN 424
Query: 492 NAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQKVPGRSRIEVKRKMYSFVSVDEFHPQ 551
++G+YVLL+++YA+ W +V+++++ + G++KVPG S +EV +++ F+ D+ HPQ
Sbjct: 425 HSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQ 484
Query: 552 FEQLHALLINLSAEMKEKGYVPQTKVVLYDLDAEEKERIVLGHSEKLAVAFGLINTSKGE 611
+ ++A L ++ ++ +GYVPQ V D++ EEKE V+ HSEK+A+AF LI+T +
Sbjct: 485 SDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERS 544
Query: 612 TIRITKNLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRNGVCSCGDYW 662
I + KNLR+C DCH K +SK N+EI+VRD +RFHHF+NG CSC DYW
Sbjct: 545 PITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 155/329 (47%), Gaps = 22/329 (6%)
Query: 53 NELIQSLCKQGNLRQALDV-----LSIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLT 107
N LI+ + GN A + +S P HTY L+ + T + +HS +
Sbjct: 89 NTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVI 148
Query: 108 DNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLE 167
+GF ++ L+++Y++ V A VFDK + + WN++ G+ EE L
Sbjct: 149 RSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALA 208
Query: 168 LYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTT 227
LY MN GI+ D FT +L AC L GK +H +++ G +H
Sbjct: 209 LYTEMN--SKGIKPDGFTIVSLLSACAK----IGALTLGKRVHVYMIKVGLTRNLHSSNV 262
Query: 228 LIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLC 287
L+D+YAR G V A +F +M KN VSW+++I A NG EA+ELF+ M + L
Sbjct: 263 LLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM-ESTEGLL 321
Query: 288 PNSVTMVSVLQACAALAALEQG-----KMIHGYILRRGLDSILPVVSALVTMYARCGKLE 342
P +T V +L AC+ +++G +M Y + ++ +V + AR G+++
Sbjct: 322 PCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHF----GCMVDLLARAGQVK 377
Query: 343 LGQCVFDHMDKR-DVVSWNSLISSYGVHG 370
M + +VV W +L+ + VHG
Sbjct: 378 KAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 432 bits (1110), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/587 (39%), Positives = 345/587 (58%), Gaps = 15/587 (2%)
Query: 79 TQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHVF 138
++ ++ ++ C + L +H + GF D + T L+ YS ++ DA +F
Sbjct: 294 SESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLF 353
Query: 139 DKTR-RRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASS 197
+ + W A+ EE ++L+ M G +R + FTY+ +L A S
Sbjct: 354 KEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG--VRPNEFTYSVILTALPVIS 411
Query: 198 CGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWS 257
E+HA V++ Y + T L+D Y + G V A VFS + K++V+WS
Sbjct: 412 --------PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWS 463
Query: 258 AMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAAL-AALEQGKMIHGYI 316
AM+A YA+ G A+++F E+ + PN T S+L CAA A++ QGK HG+
Sbjct: 464 AMLAGYAQTGETEAAIKMFGELT--KGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFA 521
Query: 317 LRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAI 376
++ LDS L V SAL+TMYA+ G +E + VF ++D+VSWNS+IS Y HG KA+
Sbjct: 522 IKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKAL 581
Query: 377 QIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDL 436
+FKEM V ++F+ V AC+HAGLVEEG+ F+ M ++ I P+ EH +CMVDL
Sbjct: 582 DVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDL 641
Query: 437 LGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFELEPTNAGNY 496
RA +LE+A K+IE++ G +W ++L +CR+H EL A++++ ++P ++ Y
Sbjct: 642 YSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAY 701
Query: 497 VLLADVYAAADMWDEVKRVKRLLEARGLQKVPGRSRIEVKRKMYSFVSVDEFHPQFEQLH 556
VLL+++YA + W E +V++L+ R ++K PG S IEVK K YSF++ D HP +Q++
Sbjct: 702 VLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIY 761
Query: 557 ALLINLSAEMKEKGYVPQTKVVLYDLDAEEKERIVLGHSEKLAVAFGLINTSKGETIRIT 616
L +LS +K+ GY P T VL D+D E KE ++ HSE+LA+AFGLI T KG + I
Sbjct: 762 MKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLII 821
Query: 617 KNLRLCEDCHSFTKFISKFANKEILVRDVNRFHHF-RNGVCSCGDYW 662
KNLR+C DCH K I+K +EI+VRD NRFHHF +GVCSCGD+W
Sbjct: 822 KNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 189/398 (47%), Gaps = 16/398 (4%)
Query: 77 NPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARH 136
P T+ L L VH+ + NG D+ + LIN+Y +V AR
Sbjct: 191 QPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARI 250
Query: 137 VFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVAS 196
+FDKT +++ WN++ G E L ++ M +R ++ V+K C
Sbjct: 251 LFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR--LNYVRLSESSFASVIKLC--- 305
Query: 197 SCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMA-VKNVVS 255
L+ +++H SV+++G+ +I T L+ Y++ ++ A +F ++ V NVVS
Sbjct: 306 -ANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVS 364
Query: 256 WSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGY 315
W+AMI+ + +N EA++LF E M+ + PN T +L A ++ E +H
Sbjct: 365 WTAMISGFLQNDGKEEAVDLFSE--MKRKGVRPNEFTYSVILTALPVISPSE----VHAQ 418
Query: 316 ILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKA 375
+++ + V +AL+ Y + GK+E VF +D +D+V+W+++++ Y G A
Sbjct: 419 VVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAA 478
Query: 376 IQIFKEMIYHGVSPSPISFVSVLGACSHAGL-VEEGKMLFESMRKEHMIRPSVEHYACMV 434
I++F E+ G+ P+ +F S+L C+ + +GK F + + S+ + ++
Sbjct: 479 IKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQ-FHGFAIKSRLDSSLCVSSALL 537
Query: 435 DLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIH 472
+ + +E A ++ + R E W S++ H
Sbjct: 538 TMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYAQH 574
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 155/302 (51%), Gaps = 19/302 (6%)
Query: 133 DARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKA 192
+A ++FDK+ R + +L + GR +E L+ +N G+ D ++ VLK
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLF--LNIHRLGMEMDCSIFSSVLK- 101
Query: 193 CVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKN 252
V+++ L G+++H ++ G+ V + T+L+D Y + VF +M +N
Sbjct: 102 -VSATLCDELF--GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERN 158
Query: 253 VVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMI 312
VV+W+ +I+ YARN M E L LF M M++ PNS T + L A +G +
Sbjct: 159 VVTWTTLISGYARNSMNDEVLTLF--MRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQV 216
Query: 313 HGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYG 372
H +++ GLD +PV ++L+ +Y +CG + + +FD + + VV+WNS+IS Y +G
Sbjct: 217 HTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLD 276
Query: 373 GKAIQIFKEMIYHGVSPSPISFVSVLGACS-----------HAGLVEEGKMLFESMRKEH 421
+A+ +F M + V S SF SV+ C+ H +V+ G + +++R
Sbjct: 277 LEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTAL 336
Query: 422 MI 423
M+
Sbjct: 337 MV 338
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 173/368 (47%), Gaps = 15/368 (4%)
Query: 101 NVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAG 160
+H GF D + T L++ Y + D R VFD+ + R + W L
Sbjct: 114 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNS 173
Query: 161 RGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNG 220
+EVL L+ RM GT + + FT+ L G G ++H V+++G +
Sbjct: 174 MNDEVLTLFMRMQNEGT--QPNSFTFAAALGVLAEEGVG----GRGLQVHTVVVKNGLDK 227
Query: 221 IVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMI 280
+ + +LI++Y + G V A +F + VK+VV+W++MI+ YA NG+ EAL +F M
Sbjct: 228 TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR 287
Query: 281 MESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGK 340
+ L +S SV++ CA L L + +H +++ G + +AL+ Y++C
Sbjct: 288 LNYVRLSESS--FASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 345
Query: 341 LELGQCVFDHMD-KRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLG 399
+ +F + +VVSW ++IS + + +A+ +F EM GV P+ ++ +L
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405
Query: 400 ACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGP 459
A E + + K + R S A ++D + K+EEAAK+ + +
Sbjct: 406 ALPVISPSE----VHAQVVKTNYERSSTVGTA-LLDAYVKLGKVEEAAKVFSGID-DKDI 459
Query: 460 KVWGSLLG 467
W ++L
Sbjct: 460 VAWSAMLA 467
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 427 bits (1099), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/628 (37%), Positives = 365/628 (58%), Gaps = 20/628 (3%)
Query: 42 TTPTSLSSRNKNELIQS---LCKQGNLRQALDVL-SIEPN---PTQHTYELLLLSCTHHN 94
T S SS ++ L+ LC Q +L +A+ + S++ + TY L+ C +
Sbjct: 16 TLRCSYSSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNR 75
Query: 95 SLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFR 154
++ + + HL NG FLV LIN+Y F+ ++DA +FD+ +R + W +
Sbjct: 76 AVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMIS 135
Query: 155 ALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVL 214
A + ++ LEL M +R + +TY+ VL++C S + +H ++
Sbjct: 136 AYSKCKIHQKALELLVLM--LRDNVRPNVYTYSSVLRSCNGMS-------DVRMLHCGII 186
Query: 215 RHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALE 274
+ G V + + LID++A+ G A VF +M + + W+++I +A+N + ALE
Sbjct: 187 KEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALE 246
Query: 275 LFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTM 334
LF+ M + T+ SVL+AC LA LE G H +I++ D IL +ALV M
Sbjct: 247 LFKRM--KRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILN--NALVDM 302
Query: 335 YARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISF 394
Y +CG LE VF+ M +RDV++W+++IS +GY +A+++F+ M G P+ I+
Sbjct: 303 YCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITI 362
Query: 395 VSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLR 454
V VL ACSHAGL+E+G F SM+K + I P EHY CM+DLLG+A KL++A K++ ++
Sbjct: 363 VGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEME 422
Query: 455 IEPGPKVWGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKR 514
EP W +LLG+CR+ N+ LAE A+K++ L+P +AG Y LL+++YA + WD V+
Sbjct: 423 CEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEE 482
Query: 515 VKRLLEARGLQKVPGRSRIEVKRKMYSFVSVDEFHPQFEQLHALLINLSAEMKEKGYVPQ 574
++ + RG++K PG S IEV +++++F+ D HPQ ++ L L + GYVP+
Sbjct: 483 IRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPE 542
Query: 575 TKVVLYDLDAEEKERIVLGHSEKLAVAFGLINTSKGETIRITKNLRLCEDCHSFTKFISK 634
T VL DL+ E+ E + HSEKLA+AFGL+ + IRI KNLR+C DCH F K SK
Sbjct: 543 TNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASK 602
Query: 635 FANKEILVRDVNRFHHFRNGVCSCGDYW 662
+ I++RD R+HHF++G CSCGDYW
Sbjct: 603 LEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 234/658 (35%), Positives = 369/658 (56%), Gaps = 52/658 (7%)
Query: 53 NELIQSLCKQGNLRQALDVLSIEPN-----PTQHTYELLLLSCTHHNSLSDALNVHSHLT 107
N +I+S K G + AL++ S N P T +L C + S +H
Sbjct: 197 NSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAV 256
Query: 108 DNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLE 167
+ Q+ F+ L+++Y+ +D+A VF + + WNA+ + GR E+ +
Sbjct: 257 TSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVR 316
Query: 168 LYRRMN---------------------GTG------------TGIRSDRFTYTYVLKACV 194
L+ +M G G +GI+ + T VL C
Sbjct: 317 LFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA 376
Query: 195 ASSCGFSLLKHGKEIHASVLRH-------GYNGIVHIMTTLIDMYARFGCVMYAGFVFSQ 247
+ L HGKEIH +++ G+ ++ LIDMYA+ V A +F
Sbjct: 377 S----VGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDS 432
Query: 248 MAVK--NVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAA 305
++ K +VV+W+ MI Y+++G A +ALEL EM E PN+ T+ L ACA+LAA
Sbjct: 433 LSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAA 492
Query: 306 LEQGKMIHGYILRRGLDSI-LPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLIS 364
L GK IH Y LR +++ L V + L+ MYA+CG + + VFD+M ++ V+W SL++
Sbjct: 493 LRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMT 552
Query: 365 SYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIR 424
YG+HGYG +A+ IF EM G ++ + VL ACSH+G++++G F M+ +
Sbjct: 553 GYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVS 612
Query: 425 PSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKR 484
P EHYAC+VDLLGRA +L A ++IE++ +EP P VW + L CRIH VEL E A+++
Sbjct: 613 PGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEK 672
Query: 485 LFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQKVPGRSRIEVKRKMYSFVS 544
+ EL + G+Y LL+++YA A W +V R++ L+ +G++K PG S +E + +F
Sbjct: 673 ITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFV 732
Query: 545 VDEFHPQFEQLHALLINLSAEMKEKGYVPQTKVVLYDLDAEEKERIVLGHSEKLAVAFGL 604
D+ HP ++++ +L++ +K+ GYVP+T L+D+D EEK+ ++ HSEKLA+A+G+
Sbjct: 733 GDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGI 792
Query: 605 INTSKGETIRITKNLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRNGVCSCGDYW 662
+ T +G IRITKNLR+C DCH+ ++S+ + +I++RD +RFHHF+NG CSC YW
Sbjct: 793 LTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 140/509 (27%), Positives = 229/509 (44%), Gaps = 67/509 (13%)
Query: 20 NSIAHLPPKPSSVCC---CVSLNSSTTPTSLSSRNKNELIQSLCKQGNLRQALDVL---- 72
N +HL SV C VSL P+ + N LI+S G + L +
Sbjct: 60 NLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMH 119
Query: 73 SIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVD 132
S+ P +T+ + +C +S+ + H+ GF + F+ L+ +YS S+
Sbjct: 120 SLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLS 179
Query: 133 DARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKA 192
DAR VFD+ + WN++ + G+ + LE++ RM G R D T VL
Sbjct: 180 DARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNE-FGCRPDNITLVNVLPP 238
Query: 193 CVASSCGFSLLKH--GKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAV 250
C SL H GK++H + + + L+DMYA+ G + A VFS M+V
Sbjct: 239 CA------SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSV 292
Query: 251 KNVVSWSAMIA-----------------------------------CYARNGMAFEALEL 275
K+VVSW+AM+A YA+ G+ +EAL +
Sbjct: 293 KDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGV 352
Query: 276 FREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLD-------SILPVV 328
R+M+ S + PN VT++SVL CA++ AL GK IH Y ++ +D V+
Sbjct: 353 CRQML--SSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVI 410
Query: 329 SALVTMYARCGKLELGQCVFDHMD--KRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHG 386
+ L+ MYA+C K++ + +FD + +RDVV+W +I Y HG KA+++ EM
Sbjct: 411 NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470
Query: 387 VSPSPISFV--SVLGACSHAGLVEEGKMLFE-SMRKEHMIRPSVEHYACMVDLLGRANKL 443
P +F L AC+ + GK + ++R + P C++D+ + +
Sbjct: 471 CQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS-NCLIDMYAKCGSI 529
Query: 444 EEAAKIIEDLRIEPGPKVWGSLLGSCRIH 472
+ A+++ D + W SL+ +H
Sbjct: 530 SD-ARLVFDNMMAKNEVTWTSLMTGYGMH 557
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 189/424 (44%), Gaps = 69/424 (16%)
Query: 117 LVTKLINVYSHFDSVDDARHVFDKTRR-----RTIYVWNALFRALTLAGRGEEVLELYRR 171
L + LI+ Y SV H RR +Y WN+L R+ G + L L+
Sbjct: 61 LTSHLISTYI---SVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGL 117
Query: 172 MNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDM 231
M+ D +T+ +V KAC S ++ G+ HA L G+ V + L+ M
Sbjct: 118 MHSLSW--TPDNYTFPFVFKACGE----ISSVRCGESAHALSLVTGFISNVFVGNALVAM 171
Query: 232 YARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSV 291
Y+R + A VF +M+V +VVSW+++I YA+ G ALE+F M E P+++
Sbjct: 172 YSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNE-FGCRPDNI 230
Query: 292 TMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHM 351
T+V+VL CA+L GK +H + + + + V + LV MYA+CG ++ VF +M
Sbjct: 231 TLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM 290
Query: 352 DKRDVVSWNSL-----------------------------------ISSYGVHGYGGKAI 376
+DVVSWN++ IS Y G G +A+
Sbjct: 291 SVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEAL 350
Query: 377 QIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLF-------ESMRK-----EHMIR 424
+ ++M+ G+ P+ ++ +SVL C+ G + GK + +RK E+M+
Sbjct: 351 GVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVI 410
Query: 425 PSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKV-WGSLLGSCRIHCNVELAERASK 483
++D+ + K++ A + + L + V W ++G H + A
Sbjct: 411 NQ------LIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLS 464
Query: 484 RLFE 487
+FE
Sbjct: 465 EMFE 468
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 125/253 (49%), Gaps = 7/253 (2%)
Query: 207 KEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKN--VVSWSAMIACYA 264
K IH +L G +++ + LI Y GC+ +A + + + V W+++I Y
Sbjct: 45 KLIHQKLLSFGIL-TLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYG 103
Query: 265 RNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSI 324
NG A + L LF +M S P++ T V +AC ++++ G+ H L G S
Sbjct: 104 DNGCANKCLYLFG--LMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISN 161
Query: 325 LPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIY 384
+ V +ALV MY+RC L + VFD M DVVSWNS+I SY G A+++F M
Sbjct: 162 VFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTN 221
Query: 385 H-GVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKL 443
G P I+ V+VL C+ G GK L MI+ ++ C+VD+ + +
Sbjct: 222 EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQ-NMFVGNCLVDMYAKCGMM 280
Query: 444 EEAAKIIEDLRIE 456
+EA + ++ ++
Sbjct: 281 DEANTVFSNMSVK 293
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 10/155 (6%)
Query: 306 LEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRD--VVSWNSLI 363
+ Q K+IH +L G+ + L + S L++ Y G L + D V WNSLI
Sbjct: 41 ISQVKLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLI 99
Query: 364 SSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMI 423
SYG +G K + +F M +P +F V AC V G ES ++
Sbjct: 100 RSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCG----ESAHALSLV 155
Query: 424 RPSVEHY---ACMVDLLGRANKLEEAAKIIEDLRI 455
+ + +V + R L +A K+ +++ +
Sbjct: 156 TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSV 190
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/617 (36%), Positives = 350/617 (56%), Gaps = 39/617 (6%)
Query: 78 PTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHV 137
P ++T+ L+ + +SLS ++H + D F+ LI+ Y +D A V
Sbjct: 129 PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKV 188
Query: 138 FDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASS 197
F + + + WN++ G ++ LEL+++M +++ T VL AC
Sbjct: 189 FTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESED--VKASHVTMVGVLSACAK-- 244
Query: 198 CGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCV------------------- 238
L+ G+++ + + + N + + ++DMY + G +
Sbjct: 245 --IRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWT 302
Query: 239 -MYAGFVFSQ-----------MAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDL 286
M G+ S+ M K++V+W+A+I+ Y +NG EAL +F E+ ++ ++
Sbjct: 303 TMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQK-NM 361
Query: 287 CPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQC 346
N +T+VS L ACA + ALE G+ IH YI + G+ V SAL+ MY++CG LE +
Sbjct: 362 KLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSRE 421
Query: 347 VFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGL 406
VF+ ++KRDV W+++I +HG G +A+ +F +M V P+ ++F +V ACSH GL
Sbjct: 422 VFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGL 481
Query: 407 VEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLL 466
V+E + LF M + I P +HYAC+VD+LGR+ LE+A K IE + I P VWG+LL
Sbjct: 482 VDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 541
Query: 467 GSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQK 526
G+C+IH N+ LAE A RL ELEP N G +VLL+++YA W+ V +++ + GL+K
Sbjct: 542 GACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKK 601
Query: 527 VPGRSRIEVKRKMYSFVSVDEFHPQFEQLHALLINLSAEMKEKGYVPQTKVVLYDLDAEE 586
PG S IE+ ++ F+S D HP E+++ L + ++K GY P+ VL ++ EE
Sbjct: 602 EPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEE 661
Query: 587 -KERIVLGHSEKLAVAFGLINTSKGETIRITKNLRLCEDCHSFTKFISKFANKEILVRDV 645
KE+ + HSEKLA+ +GLI+T + IR+ KNLR+C DCHS K IS+ ++EI+VRD
Sbjct: 662 MKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDR 721
Query: 646 NRFHHFRNGVCSCGDYW 662
RFHHFRNG CSC D+W
Sbjct: 722 YRFHHFRNGQCSCNDFW 738
Score = 163 bits (412), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 120/448 (26%), Positives = 218/448 (48%), Gaps = 51/448 (11%)
Query: 95 SLSDALNVHSHLTDNGFDQDPFLVTKL--INVYSHFDSVDDARHVFDKTRRRTIYVWNAL 152
SL H H+ G DP+ +KL + S F S++ AR VFD+ + + WN L
Sbjct: 42 SLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTL 101
Query: 153 FRALTLAGRGEEVLELYRRMNGTG-TGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHA 211
RA A + VL ++ ++ + +++T+ +++KA S L G+ +H
Sbjct: 102 IRA--YASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSS----LSLGQSLHG 155
Query: 212 SVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFE 271
++ V + +LI Y G + A VF+ + K+VVSW++MI + + G +
Sbjct: 156 MAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDK 215
Query: 272 ALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSAL 331
ALELF++ MES D+ + VTMV VL ACA + LE G+ + YI ++ L + +A+
Sbjct: 216 ALELFKK--MESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAM 273
Query: 332 VTMYARCGKLELGQCVFDHMD-------------------------------KRDVVSWN 360
+ MY +CG +E + +FD M+ ++D+V+WN
Sbjct: 274 LDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWN 333
Query: 361 SLISSYGVHGYGGKAIQIFKEM-IYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRK 419
+LIS+Y +G +A+ +F E+ + + + I+ VS L AC+ G +E G+ + ++K
Sbjct: 334 ALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK 393
Query: 420 EHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIH-CNVELA 478
H IR + + ++ + + LE++ ++ + + VW +++G +H C E
Sbjct: 394 -HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHGCGNE-- 449
Query: 479 ERASKRLFELEPTNAG-NYVLLADVYAA 505
A ++++ N N V +V+ A
Sbjct: 450 --AVDMFYKMQEANVKPNGVTFTNVFCA 475
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 151/308 (49%), Gaps = 12/308 (3%)
Query: 173 NGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMY 232
N ++R + +++ CV+ L+ K+ H ++R G + + L M
Sbjct: 20 NPNQPTTNNERSRHISLIERCVS-------LRQLKQTHGHMIRTGTFSDPYSASKLFAMA 72
Query: 233 A--RFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNS 290
A F + YA VF ++ N +W+ +I YA ++ F +M+ ES PN
Sbjct: 73 ALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQ-CYPNK 131
Query: 291 VTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDH 350
T +++A A +++L G+ +HG ++ + S + V ++L+ Y CG L+ VF
Sbjct: 132 YTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTT 191
Query: 351 MDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEG 410
+ ++DVVSWNS+I+ + G KA+++FK+M V S ++ V VL AC+ +E G
Sbjct: 192 IKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFG 251
Query: 411 KMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCR 470
+ + S +E+ + ++ M+D+ + +E+A ++ + + E W ++L
Sbjct: 252 RQVC-SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDGYA 309
Query: 471 IHCNVELA 478
I + E A
Sbjct: 310 ISEDYEAA 317
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
Query: 53 NELIQSLCKQGNLRQALDV---LSIEPNPTQHTYELL--LLSCTHHNSLSDALNVHSHLT 107
N LI + + G +AL V L ++ N + L+ L +C +L +HS++
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 108 DNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLE 167
+G + + + LI++YS ++ +R VF+ +R ++VW+A+ L + G G E ++
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 452
Query: 168 LYRRMNGTGTGIRSDRFTYTYVLKAC 193
++ +M ++ + T+T V AC
Sbjct: 453 MFYKMQ--EANVKPNGVTFTNVFCAC 476
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/591 (36%), Positives = 350/591 (59%), Gaps = 22/591 (3%)
Query: 77 NPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARH 136
+P ++ +L SC + +H H+T G + +PF++T LI++Y V DAR
Sbjct: 50 SPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARK 109
Query: 137 VFDKTRRRT--IYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACV 194
VF++ + + +NAL T + + ++RRM TG + D T ++ C
Sbjct: 110 VFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSV--DSVTMLGLVPLCT 167
Query: 195 ASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVV 254
L G+ +H ++ G + V ++ + I MY + G V +F +M VK ++
Sbjct: 168 VPE----YLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLI 223
Query: 255 SWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHG 314
+W+A+I+ Y++NG+A++ LEL+ +M +S +CP+ T+VSVL +CA L A + G +
Sbjct: 224 TWNAVISGYSQNGLAYDVLELYEQM--KSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGK 281
Query: 315 YILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGK 374
+ G + V +A ++MYARCG L + VFD M + +VSW ++I YG+HG G
Sbjct: 282 LVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEI 341
Query: 375 AIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMV 434
+ +F +MI G+ P FV VL ACSH+GL ++G LF +M++E+ + P EHY+C+V
Sbjct: 342 GLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLV 401
Query: 435 DLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFELEPTNAG 494
DLLGRA +L+EA + IE + +EP VWG+LLG+C+IH NV++AE A ++ E EP N G
Sbjct: 402 DLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIG 461
Query: 495 NYVLLADVYAAADMWDEVKRVKRLLEARGLQKVPGRSRIEVKRKMYSFVSVDEFHPQFEQ 554
YVL++++Y+ + + + R++ ++ R +K PG S +E K +++ F++ D H Q E+
Sbjct: 462 YYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEE 521
Query: 555 LHALLINLSAEMKEKGYVPQTKVVLYDLDAEEKERI---VLGHSEKLAVAFGLINTSKGE 611
+H +L L + E + ++D + E + HSE+LA+AFG++N+ G
Sbjct: 522 VHRMLDELETSVME---------LAGNMDCDRGEEVSSTTREHSERLAIAFGILNSIPGT 572
Query: 612 TIRITKNLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRNGVCSCGDYW 662
I + KNLR+CEDCH F K +SK +++ +VRD +RFH+F++GVCSC DYW
Sbjct: 573 EILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/621 (37%), Positives = 358/621 (57%), Gaps = 42/621 (6%)
Query: 75 EPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDA 134
E P T ++ +C L V++ + ++G + + +V+ L+++Y +++D A
Sbjct: 231 EVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVA 290
Query: 135 RHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACV 194
+ +FD+ + + NA+ G E L ++ M +G+R DR + + +C
Sbjct: 291 KRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM--MDSGVRPDRISMLSAISSC- 347
Query: 195 ASSCGFSLLKH---GKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVK 251
S L++ GK H VLR+G+ +I LIDMY + A +F +M+ K
Sbjct: 348 ------SQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 252 NVVSWSAMIACYARNG---MAFEALE---------------------LFREMI-----ME 282
VV+W++++A Y NG A+E E LF E I M+
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Query: 283 SHD-LCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKL 341
S + + + VTM+S+ AC L AL+ K I+ YI + G+ + + + LV M++RCG
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDP 521
Query: 342 ELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGAC 401
E +F+ + RDV +W + I + + G +AI++F +MI G+ P ++FV L AC
Sbjct: 522 ESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTAC 581
Query: 402 SHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKV 461
SH GLV++GK +F SM K H + P HY CMVDLLGRA LEEA ++IED+ +EP +
Sbjct: 582 SHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI 641
Query: 462 WGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEA 521
W SLL +CR+ NVE+A A++++ L P G+YVLL++VYA+A W+++ +V+ ++
Sbjct: 642 WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKE 701
Query: 522 RGLQKVPGRSRIEVKRKMYSFVSVDEFHPQFEQLHALLINLSAEMKEKGYVPQTKVVLYD 581
+GL+K PG S I+++ K + F S DE HP+ + A+L +S G+VP VL D
Sbjct: 702 KGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMD 761
Query: 582 LDAEEKERIVLGHSEKLAVAFGLINTSKGETIRITKNLRLCEDCHSFTKFISKFANKEIL 641
+D +EK ++ HSEKLA+A+GLI+++KG TIRI KNLR+C DCHSF KF SK N+EI+
Sbjct: 762 VDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREII 821
Query: 642 VRDVNRFHHFRNGVCSCGDYW 662
+RD NRFH+ R G CSCGD+W
Sbjct: 822 LRDNNRFHYIRQGKCSCGDFW 842
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/313 (32%), Positives = 170/313 (54%), Gaps = 11/313 (3%)
Query: 103 HSHLTDNGFDQDPFLVTKLINVYSHF---DSVDDARHVFDKTRRR-TIYVWNALFRALTL 158
H LT G D D +TKL+ +S+ A+ VF+ + T +++N+L R
Sbjct: 52 HRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYAS 111
Query: 159 AGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGY 218
+G E + L+ RM +GI D++T+ + L AC S +G +IH +++ GY
Sbjct: 112 SGLCNEAILLFLRM--MNSGISPDKYTFPFGLSACAKSRAK----GNGIQIHGLIVKMGY 165
Query: 219 NGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFRE 278
+ + +L+ YA G + A VF +M+ +NVVSW++MI YAR A +A++LF
Sbjct: 166 AKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFR 225
Query: 279 MIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARC 338
M+ + ++ PNSVTMV V+ ACA L LE G+ ++ +I G++ +VSALV MY +C
Sbjct: 226 MVRD-EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKC 284
Query: 339 GKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVL 398
+++ + +FD ++ N++ S+Y G +A+ +F M+ GV P IS +S +
Sbjct: 285 NAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAI 344
Query: 399 GACSHAGLVEEGK 411
+CS + GK
Sbjct: 345 SSCSQLRNILWGK 357
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 199/438 (45%), Gaps = 46/438 (10%)
Query: 53 NELIQSLCKQGNLRQA----LDVLSIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTD 108
N LI+ G +A L +++ +P ++T+ L +C + + + +H +
Sbjct: 103 NSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVK 162
Query: 109 NGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLEL 168
G+ +D F+ L++ Y+ +D AR VFD+ R + W ++ ++ ++L
Sbjct: 163 MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDL 222
Query: 169 YRRMNGTGTGIRSDRFTYTYVLKACVASSCG-FSLLKHGKEIHASVLRHGYNGIVHIMTT 227
+ RM +R + T V CV S+C L+ G++++A + G +++
Sbjct: 223 FFRM------VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSA 276
Query: 228 LIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLC 287
L+DMY + + A +F + N+ +AM + Y R G+ EAL +F +M +
Sbjct: 277 LVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFN--LMMDSGVR 334
Query: 288 PNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCV 347
P+ ++M+S + +C+ L + GK HGY+LR G +S + +AL+ MY +C + + +
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 394
Query: 348 FDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEM------------------------- 382
FD M + VV+WNS+++ Y +G A + F+ M
Sbjct: 395 FDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAI 454
Query: 383 -------IYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVD 435
GV+ ++ +S+ AC H G ++ K ++ + K + I+ V +VD
Sbjct: 455 EVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK-NGIQLDVRLGTTLVD 513
Query: 436 LLGRANKLEEAAKIIEDL 453
+ R E A I L
Sbjct: 514 MFSRCGDPESAMSIFNSL 531
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 140/293 (47%), Gaps = 8/293 (2%)
Query: 165 VLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHI 224
VL L + T T + + KA +S + K H S+ + G + V
Sbjct: 7 VLHLSPMVLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVST 66
Query: 225 MTTLIDMYARFGC---VMYAGFVF-SQMAVKNVVSWSAMIACYARNGMAFEALELFREMI 280
+T L+ G + +A VF + + ++++I YA +G+ EA+ LF M+
Sbjct: 67 ITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMM 126
Query: 281 MESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGK 340
+ + P+ T L ACA A G IHG I++ G L V ++LV YA CG+
Sbjct: 127 --NSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGE 184
Query: 341 LELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIY-HGVSPSPISFVSVLG 399
L+ + VFD M +R+VVSW S+I Y + A+ +F M+ V+P+ ++ V V+
Sbjct: 185 LDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVIS 244
Query: 400 ACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIED 452
AC+ +E G+ ++ +R I + + +VD+ + N ++ A ++ ++
Sbjct: 245 ACAKLEDLETGEKVYAFIRNSG-IEVNDLMVSALVDMYMKCNAIDVAKRLFDE 296
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 422 bits (1085), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/614 (35%), Positives = 351/614 (57%), Gaps = 34/614 (5%)
Query: 77 NPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARH 136
N T+ T +L + + +S +H + GF+ + + L+ +Y++ + DA+
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195
Query: 137 VFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRM----------------NGTG---- 176
VF R ++N+L L G E+ L+L+R M NG
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAI 255
Query: 177 --------TGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTL 228
G++ D++ + VL AC G + GK+IHA ++R + +++ + L
Sbjct: 256 ECFREMKVQGLKMDQYPFGSVLPAC----GGLGAINEGKQIHACIIRTNFQDHIYVGSAL 311
Query: 229 IDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCP 288
IDMY + C+ YA VF +M KNVVSW+AM+ Y + G A EA+++F +M D P
Sbjct: 312 IDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID--P 369
Query: 289 NSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVF 348
+ T+ + ACA +++LE+G HG + GL + V ++LVT+Y +CG ++ +F
Sbjct: 370 DHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLF 429
Query: 349 DHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVE 408
+ M+ RD VSW +++S+Y G + IQ+F +M+ HG+ P ++ V+ ACS AGLVE
Sbjct: 430 NEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVE 489
Query: 409 EGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGS 468
+G+ F+ M E+ I PS+ HY+CM+DL R+ +LEEA + I + P W +LL +
Sbjct: 490 KGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSA 549
Query: 469 CRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQKVP 528
CR N+E+ + A++ L EL+P + Y LL+ +YA+ WD V +++R + + ++K P
Sbjct: 550 CRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEP 609
Query: 529 GRSRIEVKRKMYSFVSVDEFHPQFEQLHALLINLSAEMKEKGYVPQTKVVLYDLDAEEKE 588
G+S I+ K K++SF + DE P +Q++A L L+ ++ + GY P T V +D++ K
Sbjct: 610 GQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKV 669
Query: 589 RIVLGHSEKLAVAFGLINTSKGETIRITKNLRLCEDCHSFTKFISKFANKEILVRDVNRF 648
+++ HSE+LA+AFGLI G+ IR+ KNLR+C DCH+ TK IS +EILVRD RF
Sbjct: 670 KMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRF 729
Query: 649 HHFRNGVCSCGDYW 662
H F++G CSCGD+W
Sbjct: 730 HRFKDGTCSCGDFW 743
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 201/447 (44%), Gaps = 66/447 (14%)
Query: 47 LSSRNKNELIQSLCKQGNLRQALDVLSIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHL 106
L +RN++ ++ + GN+ +AL P P Y ++ + S + A V
Sbjct: 16 LGARNQSRYVKMI--HGNIIRAL------PYPETFLYNNIVHAYALMKSSTYARRV---- 63
Query: 107 TDNGFDQDP----FLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRG 162
FD+ P F L+ YS + + F+K R WN L +L+G
Sbjct: 64 ----FDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLV 119
Query: 163 EEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIV 222
++ Y M + + R T +LK ++SS G L GK+IH V++ G+ +
Sbjct: 120 GAAVKAYNTMMRDFSANLT-RVTLMTMLK--LSSSNGHVSL--GKQIHGQVIKLGFESYL 174
Query: 223 HIMTTLIDMYARFGCVMYAGFVFSQMAVKNV----------------------------- 253
+ + L+ MYA GC+ A VF + +N
Sbjct: 175 LVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKD 234
Query: 254 -VSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMI 312
VSW+AMI A+NG+A EA+E FREM ++ L + SVL AC L A+ +GK I
Sbjct: 235 SVSWAAMIKGLAQNGLAKEAIECFREMKVQG--LKMDQYPFGSVLPACGGLGAINEGKQI 292
Query: 313 HGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYG 372
H I+R + V SAL+ MY +C L + VFD M +++VVSW +++ YG G
Sbjct: 293 HACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRA 352
Query: 373 GKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYAC 432
+A++IF +M G+ P + + AC++ +EEG S I + HY
Sbjct: 353 EEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG-----SQFHGKAITSGLIHYVT 407
Query: 433 ----MVDLLGRANKLEEAAKIIEDLRI 455
+V L G+ ++++ ++ ++ +
Sbjct: 408 VSNSLVTLYGKCGDIDDSTRLFNEMNV 434
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 162/319 (50%), Gaps = 18/319 (5%)
Query: 55 LIQSLCKQGNLRQALDV---LSIEP-NPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNG 110
+I+ L + G ++A++ + ++ Q+ + +L +C ++++ +H+ +
Sbjct: 241 MIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTN 300
Query: 111 FDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYR 170
F ++ + LI++Y + A+ VFD+ +++ + W A+ GR EE ++++
Sbjct: 301 FQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFL 360
Query: 171 RMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLID 230
M +GI D +T + AC S L+ G + H + G V + +L+
Sbjct: 361 DMQ--RSGIDPDHYTLGQAISACA----NVSSLEEGSQFHGKAITSGLIHYVTVSNSLVT 414
Query: 231 MYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNS 290
+Y + G + + +F++M V++ VSW+AM++ YA+ G A E ++LF +M+ H L P+
Sbjct: 415 LYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMV--QHGLKPDG 472
Query: 291 VTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVV---SALVTMYARCGKLELGQCV 347
VT+ V+ AC+ +E+G+ + L I+P + S ++ +++R G+LE
Sbjct: 473 VTLTGVISACSRAGLVEKGQRY--FKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRF 530
Query: 348 FDHMD-KRDVVSWNSLISS 365
+ M D + W +L+S+
Sbjct: 531 INGMPFPPDAIGWTTLLSA 549
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 133/323 (41%), Gaps = 71/323 (21%)
Query: 226 TTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHD 285
L+ Y++ G + F ++ ++ V+W+ +I Y+ +G+ A++ + M+ D
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM---RD 132
Query: 286 LCPN--SVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLEL 343
N VT++++L+ ++ + GK IHG +++ G +S L V S L+ MYA G +
Sbjct: 133 FSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISD 192
Query: 344 GQCVFDHMDKR------------------------------DVVSWNSLISSYGVHGYGG 373
+ VF +D R D VSW ++I +G
Sbjct: 193 AKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAK 252
Query: 374 KAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRK-------------- 419
+AI+ F+EM G+ F SVL AC G + EGK + + +
Sbjct: 253 EAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALI 312
Query: 420 ----------------EHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLR---IEPGPK 460
+ M + +V + MV G+ + EEA KI D++ I+P
Sbjct: 313 DMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHY 372
Query: 461 VWGSLLGSCRIHCNVELAERASK 483
G + +C NV E S+
Sbjct: 373 TLGQAISAC---ANVSSLEEGSQ 392
Score = 33.9 bits (76), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 297 LQACAALAALEQG---KMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDK 353
++ C L A Q KMIHG I+R + + +V YA + VFD + +
Sbjct: 10 IKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ 69
Query: 354 RDVVSWNSLISSYGVHG 370
++ SWN+L+ +Y G
Sbjct: 70 PNLFSWNNLLLAYSKAG 86
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 422 bits (1084), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/601 (35%), Positives = 353/601 (58%), Gaps = 39/601 (6%)
Query: 95 SLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDS--VDDARHVFDKTRRRTIYVWNAL 152
+ + +H+ L +G +D LV + + D +D A + D++ + T++ N++
Sbjct: 18 TFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSM 77
Query: 153 FRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHAS 212
RA + E+ + YRR+ +G ++ D +T ++++AC G + + G ++H
Sbjct: 78 IRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACT----GLRMRETGLQVHGM 133
Query: 213 VLRHGYNGIVHIMTTLIDMYARFGC-------------------------------VMYA 241
+R G++ H+ T LI +YA GC V++A
Sbjct: 134 TIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFA 193
Query: 242 GFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACA 301
+F M ++ ++W+AMI+ YA+ G + EAL +F M +E + N V M+SVL AC
Sbjct: 194 RKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKV--NGVAMISVLSACT 251
Query: 302 ALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNS 361
L AL+QG+ H YI R + + + + LV +YA+CG +E VF M++++V +W+S
Sbjct: 252 QLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSS 311
Query: 362 LISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEH 421
++ ++G+G K +++F M GV+P+ ++FVSVL CS G V+EG+ F+SMR E
Sbjct: 312 ALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEF 371
Query: 422 MIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERA 481
I P +EHY C+VDL RA +LE+A II+ + ++P VW SLL + R++ N+EL A
Sbjct: 372 GIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLA 431
Query: 482 SKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQKVPGRSRIEVKRKMYS 541
SK++ ELE N G YVLL+++YA ++ WD V V++ ++++G++K PG S +EV +++
Sbjct: 432 SKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHE 491
Query: 542 FVSVDEFHPQFEQLHALLINLSAEMKEKGYVPQTKVVLYDLDAEEKERIVLGHSEKLAVA 601
F D+ HP++ Q+ A+ ++S ++ GY T V++D+D EEKE + HSEK A+A
Sbjct: 492 FFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIA 551
Query: 602 FGLINTSKGETIRITKNLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRNGVCSCGDY 661
FG+++ + IRI KNLR+C DCH + ISK N+EI+VRD NRFHHF++G CSC +
Sbjct: 552 FGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGF 611
Query: 662 W 662
W
Sbjct: 612 W 612
Score = 122 bits (306), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 158/366 (43%), Gaps = 52/366 (14%)
Query: 38 LNSSTTPTSLSSRNKNELIQSLCKQGNLRQALD----VLSI--EPNPTQHTYELLLLSCT 91
L+ S PT + N +I++ CK ++ D +LS + P +T L+ +CT
Sbjct: 63 LDRSEKPTLFAL---NSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACT 119
Query: 92 HHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDD------------------ 133
L VH GFD DP + T LI++Y+ +D
Sbjct: 120 GLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTA 179
Query: 134 -------------ARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIR 180
AR +F+ R WNA+ G E L ++ M G++
Sbjct: 180 MVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQ--LEGVK 237
Query: 181 SDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMY 240
+ VL AC L G+ H+ + R+ V + TTL+D+YA+ G +
Sbjct: 238 VNGVAMISVLSACTQ----LGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEK 293
Query: 241 AGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQAC 300
A VF M KNV +WS+ + A NG + LELF +M+ + PN+VT VSVL+ C
Sbjct: 294 AMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFS--LMKQDGVTPNAVTFVSVLRGC 351
Query: 301 AALAALEQGKMIHGYILRR--GLDSILPVVSALVTMYARCGKLELGQCVFDHMD-KRDVV 357
+ + +++G+ H +R G++ L LV +YAR G+LE + M K
Sbjct: 352 SVVGFVDEGQR-HFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAA 410
Query: 358 SWNSLI 363
W+SL+
Sbjct: 411 VWSSLL 416
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 420 bits (1080), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/592 (38%), Positives = 350/592 (59%), Gaps = 19/592 (3%)
Query: 76 PNPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDAR 135
P Q ELL S + L +H+ + GF + L+T+L+ + AR
Sbjct: 7 PLTKQMLSELLRASSSKPKQLK---KIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYAR 63
Query: 136 HVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVA 195
VFD+ + I++WN LF+ E L LY++M G +R D FTY +V+KA
Sbjct: 64 QVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLG--VRPDEFTYPFVVKAISQ 121
Query: 196 ---SSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKN 252
SCGF+L HA V+++G+ + + T L+ MY +FG + A F+F M VK+
Sbjct: 122 LGDFSCGFAL-------HAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKD 174
Query: 253 VVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMI 312
+V+W+A +A + G + ALE F +M ++ +S T+VS+L AC L +LE G+ I
Sbjct: 175 LVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQF--DSFTVVSMLSACGQLGSLEIGEEI 232
Query: 313 HGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYG 372
+ + +D + V +A + M+ +CG E + +F+ M +R+VVSW+++I Y ++G
Sbjct: 233 YDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDS 292
Query: 373 GKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESM--RKEHMIRPSVEHY 430
+A+ +F M G+ P+ ++F+ VL ACSHAGLV EGK F M + + P EHY
Sbjct: 293 REALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHY 352
Query: 431 ACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFELEP 490
ACMVDLLGR+ LEEA + I+ + +EP +WG+LLG+C +H ++ L ++ + L E P
Sbjct: 353 ACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAP 412
Query: 491 TNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQKVPGRSRIEVKRKMYSFVSVDEFHP 550
+VLL+++YAAA WD V +V+ + G +KV S +E + K++ F D+ HP
Sbjct: 413 DIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHP 472
Query: 551 QFEQLHALLINLSAEMKEKGYVPQTKVVLYDLDAEEKERIVLGHSEKLAVAFGLINTSKG 610
Q + ++ L + ++++ GYVP T V +D++ EEKE + HSEKLA+AFGLI G
Sbjct: 473 QSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPG 532
Query: 611 ETIRITKNLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRNGVCSCGDYW 662
IR+ KNLR C+DCH+F+KF+S + EI++RD NRFHHFRNGVCSC ++W
Sbjct: 533 HPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 419 bits (1078), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/616 (35%), Positives = 361/616 (58%), Gaps = 16/616 (2%)
Query: 53 NELIQSLCKQGNLRQA----LDVLSIEPNPTQHTYELLLLSCTH-HNSLSDALNVHSHLT 107
N +I + + G +A + +L P Q+T +L + + LS + VH H
Sbjct: 385 NSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAI 444
Query: 108 DNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLE 167
D F+ T LI+ YS + +A +F++ + WNA+ T + G + L+
Sbjct: 445 KINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLK 503
Query: 168 LYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSL-LKHGKEIHASVLRHGYNGIVHIMT 226
L+ M+ G RSD FT V K +CGF + GK++HA ++ GY+ + + +
Sbjct: 504 LFALMHKQGE--RSDDFTLATVFK-----TCGFLFAINQGKQVHAYAIKSGYDLDLWVSS 556
Query: 227 TLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDL 286
++DMY + G + A F F + V + V+W+ MI+ NG A +F +M + +
Sbjct: 557 GILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMG--V 614
Query: 287 CPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQC 346
P+ T+ ++ +A + L ALEQG+ IH L+ + V ++LV MYA+CG ++ C
Sbjct: 615 LPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYC 674
Query: 347 VFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGL 406
+F ++ ++ +WN+++ HG G + +Q+FK+M G+ P ++F+ VL ACSH+GL
Sbjct: 675 LFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGL 734
Query: 407 VEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLL 466
V E SM ++ I+P +EHY+C+ D LGRA +++A +IE + +E ++ +LL
Sbjct: 735 VSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLL 794
Query: 467 GSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQK 526
+CR+ + E +R + +L ELEP ++ YVLL+++YAAA WDE+K + +++ ++K
Sbjct: 795 AACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKK 854
Query: 527 VPGRSRIEVKRKMYSFVSVDEFHPQFEQLHALLINLSAEMKEKGYVPQTKVVLYDLDAEE 586
PG S IEVK K++ FV D + Q E ++ + ++ ++K++GYVP+T L D++ EE
Sbjct: 855 DPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEE 914
Query: 587 KERIVLGHSEKLAVAFGLINTSKGETIRITKNLRLCEDCHSFTKFISKFANKEILVRDVN 646
KER + HSEKLAVAFGL++T IR+ KNLR+C DCH+ K+I+K N+EI++RD N
Sbjct: 915 KERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDAN 974
Query: 647 RFHHFRNGVCSCGDYW 662
RFH F++G+CSCGDYW
Sbjct: 975 RFHRFKDGICSCGDYW 990
Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 202/432 (46%), Gaps = 16/432 (3%)
Query: 39 NSSTTPTSLSSRNK--NELIQSLCKQGNLRQALDVLSIEPNPTQHTYELLLLSCTHHNSL 96
N +++ + + RNK +E + S L+ D++ + Q T+ L+L + +SL
Sbjct: 272 NDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSL 331
Query: 97 SDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRAL 156
+ VH G D + LIN+Y AR VFD R + WN++ +
Sbjct: 332 ALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGI 391
Query: 157 TLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRH 216
G E + L+ M G++ D++T T VLKA + G SL K++H ++
Sbjct: 392 AQNGLEVEAVCLF--MQLLRCGLKPDQYTMTSVLKAASSLPEGLSL---SKQVHVHAIKI 446
Query: 217 GYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELF 276
+ T LID Y+R C+ A +F + ++V+W+AM+A Y ++ + L+LF
Sbjct: 447 NNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLF 505
Query: 277 REMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYA 336
+M + T+ +V + C L A+ QGK +H Y ++ G D L V S ++ MY
Sbjct: 506 --ALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYV 563
Query: 337 RCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVS 396
+CG + Q FD + D V+W ++IS +G +A +F +M GV P + +
Sbjct: 564 KCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIAT 623
Query: 397 VLGACSHAGLVEEGKMLFESMRKEHMIR-PSVEHYACMVDLLGRANKLEEAAKIIEDLRI 455
+ A S +E+G+ + + K + P V +VD+ + +++A + + RI
Sbjct: 624 LAKASSCLTALEQGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFK--RI 679
Query: 456 E-PGPKVWGSLL 466
E W ++L
Sbjct: 680 EMMNITAWNAML 691
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 153/349 (43%), Gaps = 44/349 (12%)
Query: 58 SLCKQGNLRQALDVLSIEPNPTQHTYEL----LLLSCTHHNSLSDALNVHSHLTDNGFDQ 113
S C N++QA + I +T + +L C H + + + H + G D
Sbjct: 119 SECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDG 178
Query: 114 DPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMN 173
D F+ L+N+Y F V + + +F++ R + +WN + +A G EE ++L +
Sbjct: 179 DEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFH 238
Query: 174 GTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYA 233
+G+ + T + + G + A ++ NG
Sbjct: 239 --SSGLNPNEITLRLLARI------------SGDDSDAGQVKSFANG------------- 271
Query: 234 RFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTM 293
+V ++ + ++ Y +G L+ F +M+ ES C + VT
Sbjct: 272 -----------NDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMV-ESDVEC-DQVTF 318
Query: 294 VSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDK 353
+ +L + +L G+ +H L+ GLD +L V ++L+ MY + K + VFD+M +
Sbjct: 319 ILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSE 378
Query: 354 RDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACS 402
RD++SWNS+I+ +G +A+ +F +++ G+ P + SVL A S
Sbjct: 379 RDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 110/211 (52%), Gaps = 10/211 (4%)
Query: 206 GKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYAR 265
GK HA +L N ++ LI MY++ G + YA VF +M +++VSW++++A YA+
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 266 NGMAF-----EALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRG 320
+ +A LFR I+ + + +T+ +L+ C + + HGY + G
Sbjct: 118 SSECVVENIQQAFLLFR--ILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIG 175
Query: 321 LDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFK 380
LD V ALV +Y + GK++ G+ +F+ M RDVV WN ++ +Y G+ +AI +
Sbjct: 176 LDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSS 235
Query: 381 EMIYHGVSPSPIS---FVSVLGACSHAGLVE 408
G++P+ I+ + G S AG V+
Sbjct: 236 AFHSSGLNPNEITLRLLARISGDDSDAGQVK 266
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 84 ELLLLSCTHHNSLSDALNVHSHLTDNGFDQDP--FLVTKLINVYSHFDSVDDARHVFDKT 141
+L+L CTH L+ F+++P FL+ LI++YS S+ AR VFDK
Sbjct: 54 DLMLGKCTHARILT-------------FEENPERFLINNLISMYSKCGSLTYARRVFDKM 100
Query: 142 RRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSD-----RFTYTYVLKACVAS 196
R + WN++ A A E V+E ++ +R D R T + +LK C+ S
Sbjct: 101 PDRDLVSWNSILAA--YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHS 158
Query: 197 SCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSW 256
++ + H + G +G + L+++Y +FG V +F +M ++VV W
Sbjct: 159 GYVWA----SESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLW 214
Query: 257 SAMIACYARNGMAFEALELFREMIMESHDLCPNSVTM 293
+ M+ Y G EA++L S L PN +T+
Sbjct: 215 NLMLKAYLEMGFKEEAIDL--SSAFHSSGLNPNEITL 249
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 419 bits (1078), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/585 (35%), Positives = 337/585 (57%), Gaps = 8/585 (1%)
Query: 78 PTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHV 137
P Q+TY +L +C L +HS + F + ++ + LI++Y+ +D A +
Sbjct: 488 PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547
Query: 138 FDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASS 197
+ + + W + T ++ L +R+M GIRSD T + AC
Sbjct: 548 LIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQM--LDRGIRSDEVGLTNAVSACA--- 602
Query: 198 CGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWS 257
G LK G++IHA G++ + L+ +Y+R G + + F Q + ++W+
Sbjct: 603 -GLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWN 661
Query: 258 AMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYIL 317
A+++ + ++G EAL +F M E D N+ T S ++A + A ++QGK +H I
Sbjct: 662 ALVSGFQQSGNNEEALRVFVRMNREGID--NNNFTFGSAVKAASETANMKQGKQVHAVIT 719
Query: 318 RRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQ 377
+ G DS V +AL++MYA+CG + + F + ++ VSWN++I++Y HG+G +A+
Sbjct: 720 KTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALD 779
Query: 378 IFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLL 437
F +MI+ V P+ ++ V VL ACSH GLV++G FESM E+ + P EHY C+VD+L
Sbjct: 780 SFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDML 839
Query: 438 GRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYV 497
RA L A + I+++ I+P VW +LL +C +H N+E+ E A+ L ELEP ++ YV
Sbjct: 840 TRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYV 899
Query: 498 LLADVYAAADMWDEVKRVKRLLEARGLQKVPGRSRIEVKRKMYSFVSVDEFHPQFEQLHA 557
LL+++YA + WD ++ ++ +G++K PG+S IEVK ++SF D+ HP +++H
Sbjct: 900 LLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHE 959
Query: 558 LLINLSAEMKEKGYVPQTKVVLYDLDAEEKERIVLGHSEKLAVAFGLINTSKGETIRITK 617
+L+ E GYV +L +L E+K+ I+ HSEKLA++FGL++ I + K
Sbjct: 960 YFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMK 1019
Query: 618 NLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRNGVCSCGDYW 662
NLR+C DCH++ KF+SK +N+EI+VRD RFHHF G CSC DYW
Sbjct: 1020 NLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 135/462 (29%), Positives = 218/462 (47%), Gaps = 42/462 (9%)
Query: 78 PTQHTYELLLLSCTHHN-SLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARH 136
P T + LL C N SL + +HS + G D + L KL + Y + A
Sbjct: 82 PNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFK 141
Query: 137 VFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVAS 196
VFD+ RTI+ WN + + L EV L+ RM + + T++ VL+AC
Sbjct: 142 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRM--VSENVTPNEGTFSGVLEACRGG 199
Query: 197 SCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSW 256
S F +++ +IHA +L G + LID+Y+R G V A VF + +K+ SW
Sbjct: 200 SVAFDVVE---QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 256
Query: 257 SAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYI 316
AMI+ ++N EA+ LF +M + + P SVL AC + +LE G+ +HG +
Sbjct: 257 VAMISGLSKNECEAEAIRLFCDMYVLG--IMPTPYAFSSVLSACKKIESLEIGEQLHGLV 314
Query: 317 LRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAI 376
L+ G S V +ALV++Y G L + +F +M +RD V++N+LI+ GYG KA+
Sbjct: 315 LKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAM 374
Query: 377 QIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKML--------FESMRK--------- 419
++FK M G+ P + S++ ACS G + G+ L F S K
Sbjct: 375 ELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLY 434
Query: 420 ----------EHMIRPSVEH---YACMVDLLGRANKLEEAAKIIEDLRIE---PGPKVWG 463
++ + VE+ + M+ G + L + +I ++IE P +
Sbjct: 435 AKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYP 494
Query: 464 SLLGSCRIHCNVELAERASKRLFELE-PTNAGNYVLLADVYA 504
S+L +C ++EL E+ ++ + NA +L D+YA
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYA 536
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 216/462 (46%), Gaps = 18/462 (3%)
Query: 47 LSSRNKNELIQSLCKQGNLRQALDVLSIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHL 106
+S +KNE C+ +R D+ + PT + + +L +C SL +H +
Sbjct: 260 ISGLSKNE-----CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLV 314
Query: 107 TDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVL 166
GF D ++ L+++Y H ++ A H+F +R +N L L+ G GE+ +
Sbjct: 315 LKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAM 374
Query: 167 ELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMT 226
EL++RM+ G + D T ++ AC A F G+++HA + G+ I
Sbjct: 375 ELFKRMHLDG--LEPDSNTLASLVVACSADGTLF----RGQQLHAYTTKLGFASNNKIEG 428
Query: 227 TLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDL 286
L+++YA+ + A F + V+NVV W+ M+ Y + +FR+M +E ++
Sbjct: 429 ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIE--EI 486
Query: 287 CPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQC 346
PN T S+L+ C L LE G+ IH I++ V S L+ MYA+ GKL+
Sbjct: 487 VPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWD 546
Query: 347 VFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGL 406
+ +DVVSW ++I+ Y + + KA+ F++M+ G+ + + + AC+
Sbjct: 547 ILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQA 606
Query: 407 VEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKV-WGSL 465
++EG+ + + + +V L R K+EE+ E + E G + W +L
Sbjct: 607 LKEGQQI-HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFE--QTEAGDNIAWNAL 663
Query: 466 LGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAAD 507
+ + N E A R R+ E + N+ + V AA++
Sbjct: 664 VSGFQQSGNNEEALRVFVRM-NREGIDNNNFTFGSAVKAASE 704
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 419 bits (1076), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/586 (37%), Positives = 339/586 (57%), Gaps = 45/586 (7%)
Query: 114 DPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMN 173
DPF+ T +++Y+ ++ AR+VFD+ R + WN + G +E +L+ M
Sbjct: 145 DPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMK 204
Query: 174 GTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYA 233
+ + D ++ AC + +++ + I+ ++ + H++T L+ MYA
Sbjct: 205 DSN--VMPDEMILCNIVSACGRTGN----MRYNRAIYEFLIENDVRMDTHLLTALVTMYA 258
Query: 234 RFGCV--------------------MYAGF-----------VFSQMAVKNVVSWSAMIAC 262
GC+ M +G+ +F Q K++V W+ MI+
Sbjct: 259 GAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISA 318
Query: 263 YARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLD 322
Y + EAL +F EM + P+ V+M SV+ ACA L L++ K +H I GL+
Sbjct: 319 YVESDYPQEALRVFEEMCCSG--IKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLE 376
Query: 323 SILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEM 382
S L + +AL+ MYA+CG L+ + VF+ M +R+VVSW+S+I++ +HG A+ +F M
Sbjct: 377 SELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARM 436
Query: 383 IYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANK 442
V P+ ++FV VL CSH+GLVEEGK +F SM E+ I P +EHY CMVDL GRAN
Sbjct: 437 KQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANL 496
Query: 443 LEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADV 502
L EA ++IE + + +WGSL+ +CRIH +EL + A+KR+ ELEP + G VL++++
Sbjct: 497 LREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNI 556
Query: 503 YAAADMWDEVKRVKRLLEARGLQKVPGRSRIEVKRKMYSFVSVDEFHPQFEQLHALLINL 562
YA W++V+ ++R++E + + K G SRI+ K + F+ D+ H Q +++A L +
Sbjct: 557 YAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEV 616
Query: 563 SAEMKEKGYVPQTKVVLYDLDAEEKERIVLGHSEKLAVAFGLINTSKGE------TIRIT 616
+++K GYVP VL D++ EEK+ +VL HSEKLA+ FGL+N K E IRI
Sbjct: 617 VSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIV 676
Query: 617 KNLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRNGVCSCGDYW 662
KNLR+CEDCH F K +SK +EI+VRD RFH ++NG+CSC DYW
Sbjct: 677 KNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
>sp|Q9LUL5|PP229_ARATH Pentatricopeptide repeat-containing protein At3g14330
OS=Arabidopsis thaliana GN=PCMP-H57 PE=2 SV=2
Length = 710
Score = 417 bits (1071), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/590 (37%), Positives = 347/590 (58%), Gaps = 15/590 (2%)
Query: 79 TQHTYELLLLSCTHHNSLSDALNVHSHLTDN-GFDQDPFLVTKLINVYSHFDSVDDARHV 137
T Y LL +C SL + + S + +N +P L++KLI ++S +D AR +
Sbjct: 130 TPEAYTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKI 189
Query: 138 FDKTRRRTIY---VWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACV 194
FD ++ VW A+ + G + L +Y M + I F+ + LKACV
Sbjct: 190 FDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDM--LCSFIEPGNFSISVALKACV 247
Query: 195 ASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVV 254
L+ G+ IHA +++ + L+ +Y G A VF M+ +NVV
Sbjct: 248 ----DLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVV 303
Query: 255 SWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHG 314
+W+++I+ ++ E LFR+M E + T+ ++L AC+ +AAL GK IH
Sbjct: 304 TWNSLISVLSKKVRVHEMFNLFRKMQEEMIGF--SWATLTTILPACSRVAALLTGKEIHA 361
Query: 315 YILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGK 374
IL+ +P++++L+ MY +CG++E + VFD M +D+ SWN +++ Y ++G +
Sbjct: 362 QILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEE 421
Query: 375 AIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMV 434
I +F+ MI GV+P I+FV++L CS GL E G LFE M+ E + P++EHYAC+V
Sbjct: 422 VINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLV 481
Query: 435 DLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFELEPTNAG 494
D+LGRA K++EA K+IE + +P +WGSLL SCR+H NV + E A+K LF LEP N G
Sbjct: 482 DILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPG 541
Query: 495 NYVLLADVYAAADMWDEVKRVKRLLEARGLQKVPGRSRIEVKRKMYSFVSVD--EFHPQF 552
NYV+++++YA A MWD V +++ +++ RG++K G S ++VK K+ FV+ EF
Sbjct: 542 NYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNS- 600
Query: 553 EQLHALLINLSAEMKEKGYVPQTKVVLYDLDAEEKERIVLGHSEKLAVAFGLINTSKGET 612
++ + L +++ GY P T VVL+D+D E K V GHSE+LA + LI+T +G
Sbjct: 601 DEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVP 660
Query: 613 IRITKNLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRNGVCSCGDYW 662
IRITKNLR+C DCHS+ K +S+ + I++RD RFHHF +G+CSC DYW
Sbjct: 661 IRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 142/316 (44%), Gaps = 14/316 (4%)
Query: 61 KQGNLRQAL----DVLSIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPF 116
+ G+ R AL D+L P + + L +C L +H+ + D
Sbjct: 213 RNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQV 272
Query: 117 LVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTG 176
+ L+ +Y DDAR VFD R + WN+L L+ R E+ L+R+M
Sbjct: 273 VYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEM 332
Query: 177 TGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFG 236
G T T +L AC + L GKEIHA +L+ V ++ +L+DMY + G
Sbjct: 333 IGF--SWATLTTILPAC----SRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCG 386
Query: 237 CVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSV 296
V Y+ VF M K++ SW+ M+ CYA NG E + LF MI + P+ +T V++
Sbjct: 387 EVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMI--ESGVAPDGITFVAL 444
Query: 297 LQACAALAALEQG-KMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRD 355
L C+ E G + + L + LV + R GK++ V + M +
Sbjct: 445 LSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKP 504
Query: 356 VVS-WNSLISSYGVHG 370
S W SL++S +HG
Sbjct: 505 SASIWGSLLNSCRLHG 520
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/625 (35%), Positives = 351/625 (56%), Gaps = 56/625 (8%)
Query: 80 QHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDD------ 133
+H LL SC+ S SD +H L D F+ ++L+ + VDD
Sbjct: 12 KHPKLALLQSCS---SFSDLKIIHGFLLRTHLISDVFVASRLLAL-----CVDDSTFNKP 63
Query: 134 ------ARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYT 187
A +F + + ++V+N L R + + Y +M + I D T+
Sbjct: 64 TNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQM--LKSRIWPDNITFP 121
Query: 188 YVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQ 247
+++KA C G++ H+ ++R G+ V++ +L+ MYA G + AG +F Q
Sbjct: 122 FLIKASSEMECVLV----GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQ 177
Query: 248 MAVKNVVSWSAMIACYARNGMAFEALELFREM---------------------------- 279
M ++VVSW++M+A Y + GM A E+F EM
Sbjct: 178 MGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLF 237
Query: 280 -IMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARC 338
M+ + N MVSV+ +CA L ALE G+ + Y+++ + L + +ALV M+ RC
Sbjct: 238 EFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRC 297
Query: 339 GKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVL 398
G +E VF+ + + D +SW+S+I VHG+ KA+ F +MI G P ++F +VL
Sbjct: 298 GDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVL 357
Query: 399 GACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPG 458
ACSH GLVE+G ++E+M+K+H I P +EHY C+VD+LGRA KL EA I + ++P
Sbjct: 358 SACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPN 417
Query: 459 PKVWGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRL 518
+ G+LLG+C+I+ N E+AER L +++P ++G YVLL+++YA A WD+++ ++ +
Sbjct: 418 APILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDM 477
Query: 519 LEARGLQKVPGRSRIEVKRKMYSF-VSVDEFHPQFEQLHALLINLSAEMKEKGYVPQTKV 577
++ + ++K PG S IE+ K+ F + D+ HP+ ++ + +++ GY T
Sbjct: 478 MKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGD 537
Query: 578 VLYDLDAEEKERIVLGHSEKLAVAFGLINTSKGETIRITKNLRLCEDCHSFTKFISKFAN 637
+D+D EEKE + HSEKLA+A+G++ T G TIRI KNLR+CEDCH+ TK IS+
Sbjct: 538 AFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYG 597
Query: 638 KEILVRDVNRFHHFRNGVCSCGDYW 662
+E++VRD NRFHHFRNGVCSC DYW
Sbjct: 598 RELIVRDRNRFHHFRNGVCSCRDYW 622
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 123/296 (41%), Gaps = 40/296 (13%)
Query: 78 PTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSH---------- 127
P T+ L+ + + + HS + GF D ++ L+++Y++
Sbjct: 115 PDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRI 174
Query: 128 ---------------------FDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVL 166
V++AR +FD+ R ++ W+ + E+ +
Sbjct: 175 FGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAI 234
Query: 167 ELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMT 226
+L+ M G V+ + ++S L+ G+ + V++ + + T
Sbjct: 235 DLFEFMKREGV------VANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGT 288
Query: 227 TLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDL 286
L+DM+ R G + A VF + + +SWS++I A +G A +A+ F +MI S
Sbjct: 289 ALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMI--SLGF 346
Query: 287 CPNSVTMVSVLQACAALAALEQGKMIHGYILR-RGLDSILPVVSALVTMYARCGKL 341
P VT +VL AC+ +E+G I+ + + G++ L +V M R GKL
Sbjct: 347 IPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKL 402
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/590 (37%), Positives = 348/590 (58%), Gaps = 15/590 (2%)
Query: 77 NPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARH 136
P+ T+ +L + + + +H+ GF +D + ++++ YS D V + R
Sbjct: 247 QPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRM 306
Query: 137 VFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVAS 196
+FD+ +N + + + A + E L +R M G DR + + +A+
Sbjct: 307 LFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGF----DRRNFPFATMLSIAA 362
Query: 197 SCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMY--AGFVFSQMAVKNVV 254
+ S L+ G+++H L + I+H+ +L+DMYA+ C M+ A +F + + V
Sbjct: 363 N--LSSLQMGRQLHCQALLATADSILHVGNSLVDMYAK--CEMFEEAELIFKSLPQRTTV 418
Query: 255 SWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHG 314
SW+A+I+ Y + G+ L+LF +M +L + T +VL+A A+ A+L GK +H
Sbjct: 419 SWTALISGYVQKGLHGAGLKLFTKM--RGSNLRADQSTFATVLKASASFASLLLGKQLHA 476
Query: 315 YILRRG-LDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGG 373
+I+R G L+++ S LV MYA+CG ++ VF+ M R+ VSWN+LIS++ +G G
Sbjct: 477 FIIRSGNLENVFSG-SGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGE 535
Query: 374 KAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACM 433
AI F +MI G+ P +S + VL ACSH G VE+G F++M + I P +HYACM
Sbjct: 536 AAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACM 595
Query: 434 VDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFELEP-TN 492
+DLLGR + EA K+++++ EP +W S+L +CRIH N LAERA+++LF +E +
Sbjct: 596 LDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRD 655
Query: 493 AGNYVLLADVYAAADMWDEVKRVKRLLEARGLQKVPGRSRIEVKRKMYSFVSVDEFHPQF 552
A YV ++++YAAA W++V+ VK+ + RG++KVP S +EV K++ F S D+ HP
Sbjct: 656 AAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNG 715
Query: 553 EQLHALLINLSAEMKEKGYVPQTKVVLYDLDAEEKERIVLGHSEKLAVAFGLINTSKGET 612
+++ + L+AE++ +GY P T V+ D+D + K + HSE+LAVAF LI+T +G
Sbjct: 716 DEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCP 775
Query: 613 IRITKNLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRNGVCSCGDYW 662
I + KNLR C DCH+ K ISK +EI VRD +RFHHF GVCSCGDYW
Sbjct: 776 IVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 193/417 (46%), Gaps = 14/417 (3%)
Query: 78 PTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTK--LINVYSHFDSVDDAR 135
P T+ LL C + VH+ GFD +PFL L+ Y +D A
Sbjct: 145 PDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLAC 204
Query: 136 HVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVA 195
+F++ + +N L G E + L+ +M +G + FT++ VLKA V
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGH--QPSDFTFSGVLKAVV- 261
Query: 196 SSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVS 255
G G+++HA + G++ + ++D Y++ V+ +F +M + VS
Sbjct: 262 ---GLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVS 318
Query: 256 WSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGY 315
++ +I+ Y++ +L FREM D + ++L A L++L+ G+ +H
Sbjct: 319 YNVVISSYSQADQYEASLHFFREMQCMGFD--RRNFPFATMLSIAANLSSLQMGRQLHCQ 376
Query: 316 ILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKA 375
L DSIL V ++LV MYA+C E + +F + +R VSW +LIS Y G G
Sbjct: 377 ALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG 436
Query: 376 IQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVD 435
+++F +M + +F +VL A + + GK L + + + +V + +VD
Sbjct: 437 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVD 495
Query: 436 LLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFE--LEP 490
+ + +++A ++ E++ + W +L+ + + + E A A ++ E L+P
Sbjct: 496 MYAKCGSIKDAVQVFEEMP-DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQP 551
Score = 96.3 bits (238), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 144/326 (44%), Gaps = 11/326 (3%)
Query: 131 VDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVL 190
V AR +FD RT+ W L +E +L+R+M + + D T+T +L
Sbjct: 95 VSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLL 154
Query: 191 KACVASSCGFSLLKHGKEIHASVLRHGY--NGIVHIMTTLIDMYARFGCVMYAGFVFSQM 248
C + ++ ++HA ++ G+ N + + L+ Y + A +F ++
Sbjct: 155 PGCNDAVPQNAV----GQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEI 210
Query: 249 AVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQ 308
K+ V+++ +I Y ++G+ E++ LF +M H P+ T VL+A L
Sbjct: 211 PEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQ--PSDFTFSGVLKAVVGLHDFAL 268
Query: 309 GKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGV 368
G+ +H + G V + ++ Y++ ++ + +FD M + D VS+N +ISSY
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 369 HGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVE 428
++ F+EM G F ++L ++ ++ G+ L + S+
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQL--HCQALLATADSIL 386
Query: 429 HYA-CMVDLLGRANKLEEAAKIIEDL 453
H +VD+ + EEA I + L
Sbjct: 387 HVGNSLVDMYAKCEMFEEAELIFKSL 412
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 9/205 (4%)
Query: 202 LLKHGKEIHASVLRHGYNGIVHIMT----TLIDMYARFGCVMYAGFVFSQMAVKNVVSWS 257
LL+ G+ S R Y+ + H T T+I + + G V A +F M + VV+W+
Sbjct: 58 LLRRGQ---VSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWT 114
Query: 258 AMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYIL 317
++ YARN EA +LFR+M S P+ VT ++L C +H + +
Sbjct: 115 ILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAV 174
Query: 318 RRGLDS--ILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKA 375
+ G D+ L V + L+ Y +L+L +F+ + ++D V++N+LI+ Y G ++
Sbjct: 175 KLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTES 234
Query: 376 IQIFKEMIYHGVSPSPISFVSVLGA 400
I +F +M G PS +F VL A
Sbjct: 235 IHLFLKMRQSGHQPSDFTFSGVLKA 259
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 414 bits (1065), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/581 (37%), Positives = 346/581 (59%), Gaps = 9/581 (1%)
Query: 82 TYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKT 141
+E+L L C + ++ +A H + + D L+ LIN YS V+ AR VFD
Sbjct: 64 VHEILQL-CARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGM 122
Query: 142 RRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFS 201
R++ WN + T E L+++ M G + FT + VL AC +
Sbjct: 123 LERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEG--FKFSEFTISSVLSACGVNCDALE 180
Query: 202 LLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIA 261
K++H ++ + +++ T L+D+YA+ G + A VF M K+ V+WS+M+A
Sbjct: 181 C----KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVA 236
Query: 262 CYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGL 321
Y +N EAL L+R + L N T+ SV+ AC+ LAAL +GK +H I + G
Sbjct: 237 GYVQNKNYEEALLLYRRA--QRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGF 294
Query: 322 DSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKE 381
S + V S+ V MYA+CG L +F + ++++ WN++IS + H + + +F++
Sbjct: 295 GSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEK 354
Query: 382 MIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRAN 441
M G+ P+ ++F S+L C H GLVEEG+ F+ MR + + P+V HY+CMVD+LGRA
Sbjct: 355 MQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAG 414
Query: 442 KLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLAD 501
L EA ++I+ + +P +WGSLL SCR++ N+ELAE A+++LFELEP NAGN+VLL++
Sbjct: 415 LLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSN 474
Query: 502 VYAAADMWDEVKRVKRLLEARGLQKVPGRSRIEVKRKMYSFVSVDEFHPQFEQLHALLIN 561
+YAA W+E+ + ++LL ++KV G+S I++K K+++F + HP+ ++ + L N
Sbjct: 475 IYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDN 534
Query: 562 LSAEMKEKGYVPQTKVVLYDLDAEEKERIVLGHSEKLAVAFGLINTSKGETIRITKNLRL 621
L + ++ GY P + L+D++ +KE +++ HSEKLA+ FGL+ + +RI KNLR+
Sbjct: 535 LVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRI 594
Query: 622 CEDCHSFTKFISKFANKEILVRDVNRFHHFRNGVCSCGDYW 662
C DCH F K S + I+VRDVNRFHHF +G CSCGD+W
Sbjct: 595 CVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 155/341 (45%), Gaps = 29/341 (8%)
Query: 37 SLNSSTTPTSLSSRNKNELIQSLCKQGNLRQALDVLSIEPNP----TQHTYELLLLSCTH 92
SL S T L +RN+ E +ALD+ N ++ T +L +C
Sbjct: 126 SLVSWNTMIGLYTRNRME-----------SEALDIFLEMRNEGFKFSEFTISSVLSACGV 174
Query: 93 HNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNAL 152
+ + +H D + ++ T L+++Y+ + DA VF+ + ++ W+++
Sbjct: 175 NCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSM 234
Query: 153 FRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHAS 212
EE L LYRR + ++FT + V+ AC + L GK++HA
Sbjct: 235 VAGYVQNKNYEEALLLYRR--AQRMSLEQNQFTLSSVICAC----SNLAALIEGKQMHAV 288
Query: 213 VLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEA 272
+ + G+ V + ++ +DMYA+ G + + +FS++ KN+ W+ +I+ +A++ E
Sbjct: 289 ICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEV 348
Query: 273 LELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVV---S 329
+ LF + M+ + PN VT S+L C +E+G+ + L R + P V S
Sbjct: 349 MILFEK--MQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRF--FKLMRTTYGLSPNVVHYS 404
Query: 330 ALVTMYARCGKLELGQCVFDHMDKRDVVS-WNSLISSYGVH 369
+V + R G L + + S W SL++S V+
Sbjct: 405 CMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVY 445
>sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920
OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1
Length = 606
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/534 (39%), Positives = 319/534 (59%), Gaps = 7/534 (1%)
Query: 129 DSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTY 188
+S++ A +F + +N + R EE L Y M G D FTY
Sbjct: 80 NSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGN--EPDNFTYPC 137
Query: 189 VLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQM 248
+LKAC ++ GK+IH V + G V + +LI+MY R G + + VF ++
Sbjct: 138 LLKACTR----LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKL 193
Query: 249 AVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQ 308
K SWS+M++ A GM E L LFR M E+ +L MVS L ACA AL
Sbjct: 194 ESKTAASWSSMVSARAGMGMWSECLLLFRGMCSET-NLKAEESGMVSALLACANTGALNL 252
Query: 309 GKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGV 368
G IHG++LR + + V ++LV MY +CG L+ +F M+KR+ ++++++IS +
Sbjct: 253 GMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLAL 312
Query: 369 HGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVE 428
HG G A+++F +MI G+ P + +VSVL ACSH+GLV+EG+ +F M KE + P+ E
Sbjct: 313 HGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAE 372
Query: 429 HYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFEL 488
HY C+VDLLGRA LEEA + I+ + IE +W + L CR+ N+EL + A++ L +L
Sbjct: 373 HYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKL 432
Query: 489 EPTNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQKVPGRSRIEVKRKMYSFVSVDEF 548
N G+Y+L++++Y+ MWD+V R + + +GL++ PG S +E+K K + FVS D
Sbjct: 433 SSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRS 492
Query: 549 HPQFEQLHALLINLSAEMKEKGYVPQTKVVLYDLDAEEKERIVLGHSEKLAVAFGLINTS 608
HP+ ++++ +L + ++K +GY P +L ++D EEK+ + GHS+K+A+AFGL+ T
Sbjct: 493 HPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTP 552
Query: 609 KGETIRITKNLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRNGVCSCGDYW 662
G I+I +NLR+C DCH++TK IS +EI+VRD NRFH F+ G CSC DYW
Sbjct: 553 PGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 142/290 (48%), Gaps = 11/290 (3%)
Query: 78 PTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHV 137
P TY LL +CT S+ + +H + G + D F+ LIN+Y ++ + V
Sbjct: 130 PDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAV 189
Query: 138 FDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASS 197
F+K +T W+++ A G E L L+R M + T ++++ L AC +
Sbjct: 190 FEKLESKTAASWSSMVSARAGMGMWSECLLLFRGM-CSETNLKAEESGMVSALLACANTG 248
Query: 198 CGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWS 257
L G IH +LR+ + + T+L+DMY + GC+ A +F +M +N +++S
Sbjct: 249 A----LNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYS 304
Query: 258 AMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYIL 317
AMI+ A +G AL +F +MI E L P+ V VSVL AC+ +++G+ + +L
Sbjct: 305 AMISGLALHGEGESALRMFSKMIKEG--LEPDHVVYVSVLNACSHSGLVKEGRRVFAEML 362
Query: 318 RRG-LDSILPVVSALVTMYARCGKLELGQCVFDH--MDKRDVVSWNSLIS 364
+ G ++ LV + R G LE ++K DV+ W + +S
Sbjct: 363 KEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVI-WRTFLS 411
>sp|Q9LXY5|PP284_ARATH Pentatricopeptide repeat-containing protein At3g56550
OS=Arabidopsis thaliana GN=PCMP-H80 PE=2 SV=1
Length = 581
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/576 (39%), Positives = 338/576 (58%), Gaps = 17/576 (2%)
Query: 94 NSLSDALNVHSHLTDNGFDQDPFLVTKLIN--VYSHFDSVDDARHVFDK-TRRRTIYVWN 150
NS+ +HSH+ NG P + L+ S S+ A+ +FD + WN
Sbjct: 16 NSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWN 75
Query: 151 ALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIH 210
L R + + + Y RM + R D FT+ + LK+C + EIH
Sbjct: 76 YLIRGFSNSSSPLNSILFYNRMLLSSVS-RPDLFTFNFALKSCER----IKSIPKCLEIH 130
Query: 211 ASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAF 270
SV+R G+ + T+L+ Y+ G V A VF +M V+++VSW+ MI C++ G+
Sbjct: 131 GSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHN 190
Query: 271 EALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSA 330
+AL +++ M E +C +S T+V++L +CA ++AL G M+H +S + V +A
Sbjct: 191 QALSMYKRMGNEG--VCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNA 248
Query: 331 LVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPS 390
L+ MYA+CG LE VF+ M KRDV++WNS+I YGVHG+G +AI F++M+ GV P+
Sbjct: 249 LIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPN 308
Query: 391 PISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKII 450
I+F+ +L CSH GLV+EG FE M + + P+V+HY CMVDL GRA +LE + ++I
Sbjct: 309 AITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMI 368
Query: 451 EDLRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWD 510
P +W +LLGSC+IH N+EL E A K+L +LE NAG+YVL+ +Y+AA+
Sbjct: 369 YASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQ 428
Query: 511 EVKRVKRLLEARGLQKVPGRSRIEVKRKMYSFVSVDEFHPQFEQLHALLINLSAEMKEKG 570
+++L+ + LQ VPG S IE+ +++ FV D+ HP+ +++ L + G
Sbjct: 429 AFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAG 488
Query: 571 YVPQ----TKVVLYDLDAEEKERIVLGHSEKLAVAFGLINTSKGETIRITKNLRLCEDCH 626
Y P+ T L D + HSEKLA+A+GL+ T+ G T+RITKNLR+C DCH
Sbjct: 489 YKPEDSNRTAPTLSDRCLGSADT---SHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCH 545
Query: 627 SFTKFISKFANKEILVRDVNRFHHFRNGVCSCGDYW 662
SFTK++SK N+EI+VRD RFHHF +G+CSC DYW
Sbjct: 546 SFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 140/303 (46%), Gaps = 14/303 (4%)
Query: 71 VLSIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDS 130
+LS P T+ L SC S+ L +H + +GF D + T L+ YS S
Sbjct: 98 LLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGS 157
Query: 131 VDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVL 190
V+ A VFD+ R + WN + + G + L +Y+RM G+ D +T +L
Sbjct: 158 VEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMG--NEGVCGDSYTLVALL 215
Query: 191 KACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAV 250
+C S L G +H V + LIDMYA+ G + A VF+ M
Sbjct: 216 SSCAH----VSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRK 271
Query: 251 KNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGK 310
++V++W++MI Y +G EA+ FR+M+ + PN++T + +L C+ +++G
Sbjct: 272 RDVLTWNSMIIGYGVHGHGVEAISFFRKMVASG--VRPNAITFLGLLLGCSHQGLVKEG- 328
Query: 311 MIHGYILRRGLDSILPVV---SALVTMYARCGKLELG-QCVFDHMDKRDVVSWNSLISSY 366
+ + + + P V +V +Y R G+LE + ++ D V W +L+ S
Sbjct: 329 -VEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSC 387
Query: 367 GVH 369
+H
Sbjct: 388 KIH 390
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/611 (37%), Positives = 355/611 (58%), Gaps = 20/611 (3%)
Query: 53 NELIQSLCKQGNLRQALDVLSIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFD 112
N++I + G++ AL V T+ LL+ + S + H L D +
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGIS--KDPSRMMEAH-QLFDEIPE 121
Query: 113 QDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRM 172
D F +++ Y + + A+ FD+ + WN + G E+ EL+ M
Sbjct: 122 PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM 181
Query: 173 NGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMY 232
+ + ++ ++ + CG L K + +R G+V T +I Y
Sbjct: 182 ------MEKNEVSWNAMISGYI--ECG-DLEKASHFFKVAPVR----GVV-AWTAMITGY 227
Query: 233 ARFGCVMYAGFVFSQMAV-KNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSV 291
+ V A +F M V KN+V+W+AMI+ Y N + L+LFR M+ E + PNS
Sbjct: 228 MKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEG--IRPNSS 285
Query: 292 TMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHM 351
+ S L C+ L+AL+ G+ IH + + L + + +++L++MY +CG+L +F+ M
Sbjct: 286 GLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVM 345
Query: 352 DKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGK 411
K+DVV+WN++IS Y HG KA+ +F+EMI + + P I+FV+VL AC+HAGLV G
Sbjct: 346 KKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGM 405
Query: 412 MLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRI 471
FESM +++ + P +HY CMVDLLGRA KLEEA K+I + P V+G+LLG+CR+
Sbjct: 406 AYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRV 465
Query: 472 HCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQKVPGRS 531
H NVELAE A+++L +L NA YV LA++YA+ + W++V RV++ ++ + KVPG S
Sbjct: 466 HKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYS 525
Query: 532 RIEVKRKMYSFVSVDEFHPQFEQLHALLINLSAEMKEKGYVPQTKVVLYDLDAEEKERIV 591
IE++ K++ F S D HP+ + +H L L +MK GY P+ + L++++ E+KE+++
Sbjct: 526 WIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLL 585
Query: 592 LGHSEKLAVAFGLINTSKGETIRITKNLRLCEDCHSFTKFISKFANKEILVRDVNRFHHF 651
L HSEKLAVAFG I +G I++ KNLR+C DCH KFIS+ +EI+VRD RFHHF
Sbjct: 586 LWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHF 645
Query: 652 RNGVCSCGDYW 662
++G CSCGDYW
Sbjct: 646 KDGSCSCGDYW 656
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/617 (35%), Positives = 351/617 (56%), Gaps = 15/617 (2%)
Query: 53 NELIQSLCKQGNLRQALDVLS--IEPNPTQHTYELLLLS----CTHHNSLSDALNVHSHL 106
N ++ +G+ DVL + E+ +L+ C H + L +H +
Sbjct: 362 NTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYS 421
Query: 107 TDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVL 166
F + + + Y+ S+ A+ VF R +T+ WNAL A + L
Sbjct: 422 LKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGH--AQSNDPRL 479
Query: 167 ELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMT 226
L + +G+ D FT +L AC L+ GKE+H ++R+ + +
Sbjct: 480 SLDAHLQMKISGLLPDSFTVCSLLSACSK----LKSLRLGKEVHGFIIRNWLERDLFVYL 535
Query: 227 TLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDL 286
+++ +Y G + +F M K++VSW+ +I Y +NG AL +FR+M++ L
Sbjct: 536 SVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQL 595
Query: 287 CPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQC 346
C ++M+ V AC+ L +L G+ H Y L+ L+ + +L+ MYA+ G +
Sbjct: 596 C--GISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSK 653
Query: 347 VFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGL 406
VF+ + ++ SWN++I YG+HG +AI++F+EM G +P ++F+ VL AC+H+GL
Sbjct: 654 VFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGL 713
Query: 407 VEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKII-EDLRIEPGPKVWGSL 465
+ EG + M+ ++P+++HYAC++D+LGRA +L++A +++ E++ E +W SL
Sbjct: 714 IHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSL 773
Query: 466 LGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQ 525
L SCRIH N+E+ E+ + +LFELEP NYVLL+++YA W++V++V++ + L+
Sbjct: 774 LSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLR 833
Query: 526 KVPGRSRIEVKRKMYSFVSVDEFHPQFEQLHALLINLSAEMKEKGYVPQTKVVLYDLDAE 585
K G S IE+ RK++SFV + F FE++ +L L ++ + GY P T V +DL E
Sbjct: 834 KDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEE 893
Query: 586 EKERIVLGHSEKLAVAFGLINTSKGETIRITKNLRLCEDCHSFTKFISKFANKEILVRDV 645
EK + GHSEKLA+ +GLI TS+G TIR+ KNLR+C DCH+ K ISK +EI+VRD
Sbjct: 894 EKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDN 953
Query: 646 NRFHHFRNGVCSCGDYW 662
RFHHF+NGVCSCGDYW
Sbjct: 954 KRFHHFKNGVCSCGDYW 970
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 180/360 (50%), Gaps = 13/360 (3%)
Query: 113 QDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRM 172
D L T++I +Y+ S DD+R VFD R + ++ WNA+ + + +EVLE + M
Sbjct: 118 NDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEM 177
Query: 173 NGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMY 232
T T + D FTY V+KAC G S + G +H V++ G V + L+ Y
Sbjct: 178 IST-TDLLPDHFTYPCVIKACA----GMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFY 232
Query: 233 ARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHD--LCPNS 290
G V A +F M +N+VSW++MI ++ NG + E+ L EM+ E+ D P+
Sbjct: 233 GTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDV 292
Query: 291 VTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDH 350
T+V+VL CA + GK +HG+ ++ LD L + +AL+ MY++CG + Q +F
Sbjct: 293 ATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKM 352
Query: 351 MDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHG--VSPSPISFVSVLGACSHAGLVE 408
+ ++VVSWN+++ + G + ++M+ G V ++ ++ + C H +
Sbjct: 353 NNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLP 412
Query: 409 EGKMLF-ESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLG 467
K L S+++E + V + V + L A ++ +R + W +L+G
Sbjct: 413 SLKELHCYSLKQEFVYNELVAN--AFVASYAKCGSLSYAQRVFHGIRSKT-VNSWNALIG 469
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 165/369 (44%), Gaps = 14/369 (3%)
Query: 47 LSSRNKNELIQSLCKQGNLRQALDVLSI-EPNPTQHTYELLLLSCTHHNSLSDALNVHSH 105
+SS ++NEL + L ++++S + P TY ++ +C + + L VH
Sbjct: 158 ISSYSRNELYDEV-----LETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGL 212
Query: 106 LTDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEV 165
+ G +D F+ L++ Y V DA +FD R + WN++ R + G EE
Sbjct: 213 VVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEES 272
Query: 166 LELYRRM---NGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIV 222
L M NG G D T VL C + GK +H ++ + +
Sbjct: 273 FLLLGEMMEENGDG-AFMPDVATLVTVLPVCARE----REIGLGKGVHGWAVKLRLDKEL 327
Query: 223 HIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIME 282
+ L+DMY++ GC+ A +F KNVVSW+ M+ ++ G ++ R+M+
Sbjct: 328 VLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAG 387
Query: 283 SHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLE 342
D+ + VT+++ + C + L K +H Y L++ V +A V YA+CG L
Sbjct: 388 GEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLS 447
Query: 343 LGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACS 402
Q VF + + V SWN+LI + ++ +M G+ P + S+L ACS
Sbjct: 448 YAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
Query: 403 HAGLVEEGK 411
+ GK
Sbjct: 508 KLKSLRLGK 516
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 407 bits (1046), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/570 (38%), Positives = 330/570 (57%), Gaps = 22/570 (3%)
Query: 101 NVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAG 160
+H+ G D F+ ++Y DDAR +FD+ R + WNA G
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188
Query: 161 RGEEVLELY---RRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHG 217
R E +E + RR++G I T+ L AC + L G ++H VLR G
Sbjct: 189 RPREAIEAFIEFRRIDGHPNSI-----TFCAFLNAC----SDWLHLNLGMQLHGLVLRSG 239
Query: 218 YNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELF- 276
++ V + LID Y + + + +F++M KN VSW +++A Y +N +A L+
Sbjct: 240 FDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYL 299
Query: 277 --REMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTM 334
R+ I+E+ D + SVL ACA +A LE G+ IH + ++ ++ + V SALV M
Sbjct: 300 RSRKDIVETSDF-----MISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDM 354
Query: 335 YARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSP--I 392
Y +CG +E + FD M ++++V+ NSLI Y G A+ +F+EM G P+P +
Sbjct: 355 YGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYM 414
Query: 393 SFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIED 452
+FVS+L ACS AG VE G +F+SMR + I P EHY+C+VD+LGRA +E A + I+
Sbjct: 415 TFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKK 474
Query: 453 LRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEV 512
+ I+P VWG+L +CR+H +L A++ LF+L+P ++GN+VLL++ +AAA W E
Sbjct: 475 MPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEA 534
Query: 513 KRVKRLLEARGLQKVPGRSRIEVKRKMYSFVSVDEFHPQFEQLHALLINLSAEMKEKGYV 572
V+ L+ G++K G S I VK ++++F + D H +++ L L EM+ GY
Sbjct: 535 NTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYK 594
Query: 573 PQTKVVLYDLDAEEKERIVLGHSEKLAVAFGLINTSKGETIRITKNLRLCEDCHSFTKFI 632
P K+ LYDL+ EEK V HSEKLA+AFGL++ IRITKNLR+C DCHSF KF+
Sbjct: 595 PDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFV 654
Query: 633 SKFANKEILVRDVNRFHHFRNGVCSCGDYW 662
S +EI+VRD NRFH F++G+CSC DYW
Sbjct: 655 SGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 187/415 (45%), Gaps = 26/415 (6%)
Query: 115 PFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNG 174
PFL LIN+YS D + AR V T R + W +L L G L + M
Sbjct: 42 PFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMR- 100
Query: 175 TGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYAR 234
G+ + FT+ KA VAS L GK+IHA ++ G V + + DMY +
Sbjct: 101 -REGVVPNDFTFPCAFKA-VAS---LRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCK 155
Query: 235 FGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMV 294
A +F ++ +N+ +W+A I+ +G EA+E F E D PNS+T
Sbjct: 156 TRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIE--FRRIDGHPNSITFC 213
Query: 295 SVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKR 354
+ L AC+ L G +HG +LR G D+ + V + L+ Y +C ++ + +F M +
Sbjct: 214 AFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK 273
Query: 355 DVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLF 414
+ VSW SL+++Y + KA ++ V S SVL AC+ +E G+ +
Sbjct: 274 NAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSI- 332
Query: 415 ESMRKEHMIRPSVEHY----ACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCR 470
H ++ VE + +VD+ G+ +E++ + +++ E SL+G
Sbjct: 333 ----HAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGGYA 387
Query: 471 IHCNVELAERASKRLF-ELEPTNAG---NYVLLADVYAAADMWDEVKRVKRLLEA 521
V++A LF E+ P G NY+ + +A V+ ++ ++
Sbjct: 388 HQGQVDMA----LALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDS 438
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 143/324 (44%), Gaps = 12/324 (3%)
Query: 53 NELIQSLCKQGNLRQALDVL----SIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTD 108
N I + G R+A++ I+ +P T+ L +C+ L+ + +H +
Sbjct: 178 NAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLR 237
Query: 109 NGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLEL 168
+GFD D + LI+ Y + + +F + + W +L A E+ L
Sbjct: 238 SGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVL 297
Query: 169 YRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTL 228
Y R + + F + VL AC G + L+ G+ IHA ++ + + + L
Sbjct: 298 YLR--SRKDIVETSDFMISSVLSACA----GMAGLELGRSIHAHAVKACVERTIFVGSAL 351
Query: 229 IDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCP 288
+DMY + GC+ + F +M KN+V+ +++I YA G AL LF EM P
Sbjct: 352 VDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTP 411
Query: 289 NSVTMVSVLQACAALAALEQG-KMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCV 347
N +T VS+L AC+ A+E G K+ G++ S +V M R G +E
Sbjct: 412 NYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEF 471
Query: 348 FDHMDKRDVVS-WNSLISSYGVHG 370
M + +S W +L ++ +HG
Sbjct: 472 IKKMPIQPTISVWGALQNACRMHG 495
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 3/203 (1%)
Query: 201 SLLKHGKEIHASVLRHGYNGIVHIMTT-LIDMYARFGCVMYAGFVFSQMAVKNVVSWSAM 259
S ++ G+ +HA +++ + + LI+MY++ A V +NVVSW+++
Sbjct: 20 SSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSL 79
Query: 260 IACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRR 319
I+ A+NG AL F EM E + PN T +A A+L GK IH ++
Sbjct: 80 ISGLAQNGHFSTALVEFFEMRREG--VVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKC 137
Query: 320 GLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIF 379
G + V + MY + + + +FD + +R++ +WN+ IS+ G +AI+ F
Sbjct: 138 GRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAF 197
Query: 380 KEMIYHGVSPSPISFVSVLGACS 402
E P+ I+F + L ACS
Sbjct: 198 IEFRRIDGHPNSITFCAFLNACS 220
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 296 VLQACAALAALEQGKMIHGYILRRGLDSILP--VVSALVTMYARCGKLELGQCVFDHMDK 353
+L+ + +++ G+++H I++ LDS P + + L+ MY++ E + V
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKT-LDSPPPPFLANYLINMYSKLDHPESARLVLRLTPA 70
Query: 354 RDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKML 413
R+VVSW SLIS +G+ A+ F EM GV P+ +F A + L GK +
Sbjct: 71 RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 130
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/582 (37%), Positives = 341/582 (58%), Gaps = 16/582 (2%)
Query: 85 LLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHF---DSVDDARHVFDKT 141
LL+ C NSL + + + ++ + +D V KLIN + S+ ARH+F+
Sbjct: 34 LLISKC---NSLRELMQIQAYAIKSHI-EDVSFVAKLINFCTESPTESSMSYARHLFEAM 89
Query: 142 RRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFS 201
I ++N++ R + EV L+ + GI D +T+ +LKAC +
Sbjct: 90 SEPDIVIFNSMARGYSRFTNPLEVFSLFVEI--LEDGILPDNYTFPSLLKACAVAKA--- 144
Query: 202 LLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIA 261
L+ G+++H ++ G + V++ TLI+MY V A VF ++ VV ++AMI
Sbjct: 145 -LEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMIT 203
Query: 262 CYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGL 321
YAR EAL LFREM + L PN +T++SVL +CA L +L+ GK IH Y +
Sbjct: 204 GYARRNRPNEALSLFREM--QGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 322 DSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKE 381
+ V +AL+ M+A+CG L+ +F+ M +D +W+++I +Y HG K++ +F+
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFER 321
Query: 382 MIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRAN 441
M V P I+F+ +L ACSH G VEEG+ F M + I PS++HY MVDLL RA
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAG 381
Query: 442 KLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLAD 501
LE+A + I+ L I P P +W LL +C H N++LAE+ S+R+FEL+ ++ G+YV+L++
Sbjct: 382 NLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSN 441
Query: 502 VYAAADMWDEVKRVKRLLEARGLQKVPGRSRIEVKRKMYSFVSVDEFHPQFEQLHALLIN 561
+YA W+ V ++++++ R KVPG S IEV ++ F S D +LH L
Sbjct: 442 LYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDE 501
Query: 562 LSAEMKEKGYVPQTKVVLY-DLDAEEKERIVLGHSEKLAVAFGLINTSKGETIRITKNLR 620
+ E+K GYVP T +V++ +++ +EKE + HSEKLA+ FGL+NT G TIR+ KNLR
Sbjct: 502 MVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLR 561
Query: 621 LCEDCHSFTKFISKFANKEILVRDVNRFHHFRNGVCSCGDYW 662
+C DCH+ K IS +++++RDV RFHHF +G CSCGD+W
Sbjct: 562 VCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 144/298 (48%), Gaps = 16/298 (5%)
Query: 78 PTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHV 137
P +T+ LL +C +L + +H G D + ++ LIN+Y+ + VD AR V
Sbjct: 127 PDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCV 186
Query: 138 FDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASS 197
FD+ + +NA+ R E L L+R M G ++ + T VL +C
Sbjct: 187 FDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQ--GKYLKPNEITLLSVLSSCAL-- 242
Query: 198 CGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWS 257
L GK IH +H + V + T LIDM+A+ G + A +F +M K+ +WS
Sbjct: 243 --LGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWS 300
Query: 258 AMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYIL 317
AMI YA +G A +++ +F M S ++ P+ +T + +L AC+ +E+G+ ++
Sbjct: 301 AMIVAYANHGKAEKSMLMFER--MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMV 358
Query: 318 RR-GLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDV----VSWNSLISSYGVHG 370
+ G+ + ++V + +R G LE ++ +DK + + W L+++ H
Sbjct: 359 SKFGIVPSIKHYGSMVDLLSRAGNLEDA---YEFIDKLPISPTPMLWRILLAACSSHN 413
Score = 33.9 bits (76), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 48 SSRNKNELIQSLCKQGNLRQALDVLSIEP-NPTQHTYELLLLSCTHHNSLSDALNVHSHL 106
S ++ ++ L + GNL A + + P +PT + +LL +C+ HN+L A V +
Sbjct: 366 SIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERI 425
Query: 107 --TDNGFDQDPFLVTKLINVYSHFDSVDDARHV 137
D+ D +++ L ++ VD R V
Sbjct: 426 FELDDSHGGDYVILSNLYARNKKWEYVDSLRKV 458
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 243/716 (33%), Positives = 371/716 (51%), Gaps = 113/716 (15%)
Query: 52 KNELIQSLCKQGNLRQALDVLSIEPNPTQHT--YELLLLSCTHHNSLSDALNVHSHLTDN 109
+ ++ C G++ A V P + T Y ++ +H+N A+N+ +
Sbjct: 83 RTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHE 142
Query: 110 GFDQDPF------------------------------------LVTKLINVYSHFDS--- 130
GF D F + L++VYS S
Sbjct: 143 GFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPS 202
Query: 131 -VDDARHVFDK---------TRRRTIYV-----------------------WNALFRALT 157
+ AR VFD+ T T YV +NA+
Sbjct: 203 LLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYV 262
Query: 158 LAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLR-- 215
G +E LE+ RRM +GI D FTY V++AC + LL+ GK++HA VLR
Sbjct: 263 NRGFYQEALEMVRRM--VSSGIELDEFTYPSVIRACATAG----LLQLGKQVHAYVLRRE 316
Query: 216 ----HGYNGIVHIM------------------------TTLIDMYARFGCVMYAGFVFSQ 247
H N +V + L+ Y G + A +F +
Sbjct: 317 DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKE 376
Query: 248 MAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALE 307
M KN++SW MI+ A NG E L+LF M E + C + + +++CA L A
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFS--GAIKSCAVLGAYC 434
Query: 308 QGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYG 367
G+ H +L+ G DS L +AL+TMYA+CG +E + VF M D VSWN+LI++ G
Sbjct: 435 NGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALG 494
Query: 368 VHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSV 427
HG+G +A+ +++EM+ G+ P I+ ++VL ACSHAGLV++G+ F+SM + I P
Sbjct: 495 QHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGA 554
Query: 428 EHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFE 487
+HYA ++DLL R+ K +A +IE L +P ++W +LL CR+H N+EL A+ +LF
Sbjct: 555 DHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFG 614
Query: 488 LEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQKVPGRSRIEVKRKMYSFVSVDE 547
L P + G Y+LL++++AA W+EV RV++L+ RG++K S IE++ ++++F+ D
Sbjct: 615 LIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDT 674
Query: 548 FHPQFEQLHALLINLSAEMKEKGYVPQTKVVLYDLDAE-EKERIVLGHSEKLAVAFGLIN 606
HP+ E ++ L +L EM+ GYVP T VL+D++++ KE ++ HSEK+AVAFGL+
Sbjct: 675 SHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMK 734
Query: 607 TSKGETIRITKNLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRNGVCSCGDYW 662
G TIRI KNLR C DCH+F +F+S ++I++RD RFHHFRNG CSCG++W
Sbjct: 735 LPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 183/427 (42%), Gaps = 96/427 (22%)
Query: 74 IEPNP-------TQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYS 126
++PNP ++ L L SL A VH ++ GF ++ +LI+VY
Sbjct: 1 MQPNPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYC 60
Query: 127 HFDSVDDARHVFDKTRR---------------------------------RTIYVWNALF 153
++ AR +FD+ R ++NA+
Sbjct: 61 KSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMI 120
Query: 154 RALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLL----KHGKEI 209
+ G + L+ +M G + D FT+ VL G +L+ K +
Sbjct: 121 TGFSHNNDGYSAINLFCKMK--HEGFKPDNFTFASVL-------AGLALVADDEKQCVQF 171
Query: 210 HASVLRHGYNGIVHIMTTLIDMYARFGC----VMYAGFVFSQMAVKNVVSWSAMIACYAR 265
HA+ L+ G I + L+ +Y++ + A VF ++ K+ SW+ M+ Y +
Sbjct: 172 HAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVK 231
Query: 266 NG------------------MAF--------------EALELFREMIMESHDLCPNSVTM 293
NG +A+ EALE+ R M+ +L + T
Sbjct: 232 NGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIEL--DEFTY 289
Query: 294 VSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDK 353
SV++ACA L+ GK +H Y+LRR D ++LV++Y +CGK + + +F+ M
Sbjct: 290 PSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPA 348
Query: 354 RDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKML 413
+D+VSWN+L+S Y G+ G+A IFKEM + +S++ ++ + G EEG L
Sbjct: 349 KDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI----LSWMIMISGLAENGFGEEGLKL 404
Query: 414 FESMRKE 420
F M++E
Sbjct: 405 FSCMKRE 411
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/622 (34%), Positives = 356/622 (57%), Gaps = 64/622 (10%)
Query: 95 SLSDALNVHSHLTDNGFDQDPFLVTKLINVYS----HFDSVDDARHVFDKTRRRTIYVWN 150
++ D +H+ +G +D +++ + H +D A +F++ +R + WN
Sbjct: 35 TIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWN 94
Query: 151 ALFRALTLAGRGEEVLEL---YRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGK 207
+ R + + + ++ + Y M + + +RFT+ VLKAC + ++ GK
Sbjct: 95 TIIRGFSESDEDKALIAITLFYEMM--SDEFVEPNRFTFPSVLKACAKTG----KIQEGK 148
Query: 208 EIHASVLRHGYNGIVHIMTTL--------------------------------------- 228
+IH L++G+ G +M+ L
Sbjct: 149 QIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEI 208
Query: 229 ------IDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIME 282
ID Y R G A +F +M ++VVSW+ MI+ Y+ NG +A+E+FREM +
Sbjct: 209 VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM--K 266
Query: 283 SHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGL--DSILPVVSALVTMYARCGK 340
D+ PN VT+VSVL A + L +LE G+ +H Y G+ D +L SAL+ MY++CG
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG--SALIDMYSKCGI 324
Query: 341 LELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGA 400
+E VF+ + + +V++W+++I+ + +HG G AI F +M GV PS ++++++L A
Sbjct: 325 IEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTA 384
Query: 401 CSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPK 460
CSH GLVEEG+ F M + P +EHY CMVDLLGR+ L+EA + I ++ I+P
Sbjct: 385 CSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDV 444
Query: 461 VWGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLE 520
+W +LLG+CR+ NVE+ +R + L ++ P ++G YV L+++YA+ W EV ++ ++
Sbjct: 445 IWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMK 504
Query: 521 ARGLQKVPGRSRIEVKRKMYSFVSVDEFHPQFEQLHALLINLSAEMKEKGYVPQTKVVLY 580
+ ++K PG S I++ ++ FV D+ HP+ ++++++L+ +S +++ GY P T VL
Sbjct: 505 EKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLL 564
Query: 581 DLDAEEKERIVLGHSEKLAVAFGLINTSKGETIRITKNLRLCEDCHSFTKFISKFANKEI 640
+L+ E+KE ++ HSEK+A AFGLI+TS G+ IRI KNLR+CEDCHS K ISK ++I
Sbjct: 565 NLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKI 624
Query: 641 LVRDVNRFHHFRNGVCSCGDYW 662
VRD RFHHF++G CSC DYW
Sbjct: 625 TVRDRKRFHHFQDGSCSCMDYW 646
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 154/362 (42%), Gaps = 60/362 (16%)
Query: 74 IEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDD 133
+EPN + T+ +L +C + + +H GF D F+++ L+ +Y + D
Sbjct: 124 VEPN--RFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKD 181
Query: 134 ---------------------------------------------ARHVFDKTRRRTIYV 148
AR +FDK R+R++
Sbjct: 182 ARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVS 241
Query: 149 WNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKE 208
WN + +L G ++ +E++R M IR + T VL A L+ G+
Sbjct: 242 WNTMISGYSLNGFFKDAVEVFREMK--KGDIRPNYVTLVSVLPAISR----LGSLELGEW 295
Query: 209 IHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGM 268
+H G + + LIDMY++ G + A VF ++ +NV++WSAMI +A +G
Sbjct: 296 LHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQ 355
Query: 269 AFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILR-RGLDSILPV 327
A +A++ F + M + P+ V +++L AC+ +E+G+ ++ GL+ +
Sbjct: 356 AGDAIDCFCK--MRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEH 413
Query: 328 VSALVTMYARCGKL-ELGQCVFDHMDKRDVVSWNSLISSYGVHG---YGGKAIQIFKEMI 383
+V + R G L E + + + K D V W +L+ + + G G + I +M+
Sbjct: 414 YGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMV 473
Query: 384 YH 385
H
Sbjct: 474 PH 475
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 113/302 (37%), Gaps = 68/302 (22%)
Query: 53 NELIQSLCKQGNLRQALDVL------SIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHL 106
N +I G + A++V I PN T +L + + SL +H +
Sbjct: 243 NTMISGYSLNGFFKDAVEVFREMKKGDIRPNYV--TLVSVLPAISRLGSLELGEWLHLYA 300
Query: 107 TDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVL 166
D+G D L + LI++YS ++ A HVF++ R + W+A+ + G+ + +
Sbjct: 301 EDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAI 360
Query: 167 ELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMT 226
+ + +M G+R Y +L AC HG
Sbjct: 361 DCFCKMR--QAGVRPSDVAYINLLTAC----------SHG-------------------- 388
Query: 227 TLIDMYARFGCVMYAGFVFSQMAVKN-----VVSWSAMIACYARNGMAFEALELFREMIM 281
G V FSQM + + + M+ R+G+ EA E M +
Sbjct: 389 ---------GLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPI 439
Query: 282 ESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVS----ALVTMYAR 337
+ P+ V ++L AC +E GK + ++ ++P S AL MYA
Sbjct: 440 K-----PDDVIWKALLGACRMQGNVEMGKRVANILM-----DMVPHDSGAYVALSNMYAS 489
Query: 338 CG 339
G
Sbjct: 490 QG 491
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 404 bits (1039), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/587 (36%), Positives = 346/587 (58%), Gaps = 9/587 (1%)
Query: 77 NPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARH 136
P T +L +C H LS A +++++ GF + + LI+VY+ + AR
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 363
Query: 137 VFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVAS 196
VF+ + WN++ +G E ++L++ M ++D TY + ++
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE--QADHITYLML----ISV 417
Query: 197 SCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSW 256
S + LK GK +H++ ++ G + + LIDMYA+ G V + +FS M + V+W
Sbjct: 418 STRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTW 477
Query: 257 SAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYI 316
+ +I+ R G L++ +M ++ P+ T + L CA+LAA GK IH +
Sbjct: 478 NTVISACVRFGDFATGLQVTTQM--RKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCL 535
Query: 317 LRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAI 376
LR G +S L + +AL+ MY++CG LE VF+ M +RDVV+W +I +YG++G G KA+
Sbjct: 536 LRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKAL 595
Query: 377 QIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDL 436
+ F +M G+ P + F++++ ACSH+GLV+EG FE M+ + I P +EHYAC+VDL
Sbjct: 596 ETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDL 655
Query: 437 LGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFELEPTNAGNY 496
L R+ K+ +A + I+ + I+P +W S+L +CR ++E AER S+R+ EL P + G
Sbjct: 656 LSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYS 715
Query: 497 VLLADVYAAADMWDEVKRVKRLLEARGLQKVPGRSRIEVKRKMYSFVSVDEFHPQFEQLH 556
+L ++ YAA WD+V +++ L+ + + K PG S IEV + ++ F S D+ PQ E ++
Sbjct: 716 ILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIY 775
Query: 557 ALLINLSAEMKEKGYVPQTKVVLYDL-DAEEKERIVLGHSEKLAVAFGLINTSKGETIRI 615
L L + M ++GY+P + V +L + EEK R++ GHSE+LA+AFGL+NT G +++
Sbjct: 776 KSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQV 835
Query: 616 TKNLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRNGVCSCGDYW 662
KNLR+C DCH TK ISK +EILVRD NRFH F++G CSC D W
Sbjct: 836 MKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 184/337 (54%), Gaps = 10/337 (2%)
Query: 91 THHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDK-TRRRTIYVW 149
+ ++L++ +H+ + G D F KLI+ YSHF + VF + + + +Y+W
Sbjct: 15 SSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLW 74
Query: 150 NALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEI 209
N++ RA + G E LE Y ++ + + D++T+ V+KAC G + G +
Sbjct: 75 NSIIRAFSKNGLFPEALEFYGKLRESK--VSPDKYTFPSVIKACA----GLFDAEMGDLV 128
Query: 210 HASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMA 269
+ +L G+ + + L+DMY+R G + A VF +M V+++VSW+++I+ Y+ +G
Sbjct: 129 YEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYY 188
Query: 270 FEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVS 329
EALE++ E+ ++ + P+S T+ SVL A L ++QG+ +HG+ L+ G++S++ V +
Sbjct: 189 EEALEIYHEL--KNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246
Query: 330 ALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSP 389
LV MY + + + VFD MD RD VS+N++I Y +++++F E + P
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKP 305
Query: 390 SPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPS 426
++ SVL AC H + K ++ M K + S
Sbjct: 306 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLES 342
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/604 (34%), Positives = 354/604 (58%), Gaps = 46/604 (7%)
Query: 94 NSLSDALNVHSHLTDNGF---DQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWN 150
S+ + L +H+ + + + P L KL Y+ + + +F +T ++++
Sbjct: 40 QSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFT 99
Query: 151 ALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIH 210
A ++ G ++ LY ++ + I + FT++ +LK+C K GK IH
Sbjct: 100 AAINTASINGLKDQAFLLYVQL--LSSEINPNEFTFSSLLKSCST--------KSGKLIH 149
Query: 211 ASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYAR----- 265
VL+ G ++ T L+D+YA+ G V+ A VF +M +++VS +AMI CYA+
Sbjct: 150 THVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVE 209
Query: 266 --------------------------NGMAFEALELFREMIMESHDLCPNSVTMVSVLQA 299
+G +AL LF++++ E P+ +T+V+ L A
Sbjct: 210 AARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPK-PDEITVVAALSA 268
Query: 300 CAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSW 359
C+ + ALE G+ IH ++ + + V + L+ MY++CG LE VF+ ++D+V+W
Sbjct: 269 CSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAW 328
Query: 360 NSLISSYGVHGYGGKAIQIFKEMI-YHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMR 418
N++I+ Y +HGY A+++F EM G+ P+ I+F+ L AC+HAGLV EG +FESM
Sbjct: 329 NAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMG 388
Query: 419 KEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELA 478
+E+ I+P +EHY C+V LLGRA +L+ A + I+++ ++ +W S+LGSC++H + L
Sbjct: 389 QEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLG 448
Query: 479 ERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQKVPGRSRIEVKRK 538
+ ++ L L N+G YVLL+++YA+ ++ V +V+ L++ +G+ K PG S IE++ K
Sbjct: 449 KEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENK 508
Query: 539 MYSFVSVDEFHPQFEQLHALLINLSAEMKEKGYVPQTKVVLYDLDAEEKERIVLGHSEKL 598
++ F + D H + ++++ +L +S +K GYVP T VL DL+ EKE+ + HSE+L
Sbjct: 509 VHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERL 568
Query: 599 AVAFGLINTSKGETIRITKNLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRNGVCSC 658
A+A+GLI+T G ++I KNLR+C DCH+ TK ISK ++I++RD NRFHHF +G CSC
Sbjct: 569 AIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSC 628
Query: 659 GDYW 662
GD+W
Sbjct: 629 GDFW 632
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 151/335 (45%), Gaps = 43/335 (12%)
Query: 69 LDVLSIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSH- 127
+ +LS E NP + T+ LL SC S +H+H+ G DP++ T L++VY+
Sbjct: 119 VQLLSSEINPNEFTFSSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKG 174
Query: 128 ---------FD---------------------SVDDARHVFDKTRRRTIYVWNALFRALT 157
FD +V+ AR +FD R I WN +
Sbjct: 175 GDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYA 234
Query: 158 LAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHG 217
G + L L++++ G + D T L AC S G L+ G+ IH V
Sbjct: 235 QHGFPNDALMLFQKLLAEGKP-KPDEITVVAALSAC--SQIG--ALETGRWIHVFVKSSR 289
Query: 218 YNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFR 277
V + T LIDMY++ G + A VF+ K++V+W+AMIA YA +G + +AL LF
Sbjct: 290 IRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFN 349
Query: 278 EMIMESHDLCPNSVTMVSVLQACAALAALEQG-KMIHGYILRRGLDSILPVVSALVTMYA 336
EM L P +T + LQACA + +G ++ G+ + LV++
Sbjct: 350 EM-QGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLG 408
Query: 337 RCGKLELGQCVFDHMD-KRDVVSWNSLISSYGVHG 370
R G+L+ +M+ D V W+S++ S +HG
Sbjct: 409 RAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHG 443
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 118/285 (41%), Gaps = 45/285 (15%)
Query: 75 EPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDA 134
+P P + T L +C+ +L +H + + + + T LI++YS S+++A
Sbjct: 254 KPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEA 313
Query: 135 RHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACV 194
VF+ T R+ I WNA+ + G ++ L L+ M G TG++ T+ L+AC
Sbjct: 314 VLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGI-TGLQPTDITFIGTLQACA 372
Query: 195 ASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVK-NV 253
HA ++ G I ++ G + +K +
Sbjct: 373 ---------------HAGLVNEG-----------IRIFESMG---------QEYGIKPKI 397
Query: 254 VSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIH 313
+ +++ R G A E + M M++ +SV SVL +C GK I
Sbjct: 398 EHYGCLVSLLGRAGQLKRAYETIKNMNMDA-----DSVLWSSVLGSCKLHGDFVLGKEIA 452
Query: 314 GYILRRGLDSILPVVSALVT-MYARCGKLELGQCVFDHMDKRDVV 357
Y++ GL+ + L++ +YA G E V + M ++ +V
Sbjct: 453 EYLI--GLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIV 495
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/610 (34%), Positives = 338/610 (55%), Gaps = 22/610 (3%)
Query: 55 LIQSLCKQGNLRQALDVLSIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQD 114
L++ G + A + P + ++ ++L+ + DA ++ + D +D
Sbjct: 116 LVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPD----KD 171
Query: 115 PFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNG 174
T +I+ VD+AR +FD+ R++ W + R ++ +++ M
Sbjct: 172 NIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM-P 230
Query: 175 TGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYAR 234
T + YV + + + K + A +I +
Sbjct: 231 EKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIAC-------------NAMISGLGQ 277
Query: 235 FGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMV 294
G + A VF M +N SW +I + RNG EAL+LF ++M+ + P T++
Sbjct: 278 KGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLF--ILMQKQGVRPTFPTLI 335
Query: 295 SVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKR 354
S+L CA+LA+L GK +H ++R D + V S L+TMY +CG+L + +FD +
Sbjct: 336 SILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSK 395
Query: 355 DVVSWNSLISSYGVHGYGGKAIQIFKEMIYHG-VSPSPISFVSVLGACSHAGLVEEGKML 413
D++ WNS+IS Y HG G +A+++F EM G P+ ++FV+ L ACS+AG+VEEG +
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKI 455
Query: 414 FESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHC 473
+ESM ++P HYACMVD+LGRA + EA ++I+ + +EP VWGSLLG+CR H
Sbjct: 456 YESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHS 515
Query: 474 NVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQKVPGRSRI 533
+++AE +K+L E+EP N+G Y+LL+++YA+ W +V +++L++ R ++K PG S
Sbjct: 516 QLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWT 575
Query: 534 EVKRKMYSFVSVD-EFHPQFEQLHALLINLSAEMKEKGYVPQTKVVLYDLDAEEKERIVL 592
EV+ K+++F HP+ E + +L L ++E GY P L+D+D EEK +
Sbjct: 576 EVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLK 635
Query: 593 GHSEKLAVAFGLINTSKGETIRITKNLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFR 652
HSE+LAVA+ L+ S+G IR+ KNLR+C DCH+ K ISK +EI++RD NRFHHFR
Sbjct: 636 YHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFR 695
Query: 653 NGVCSCGDYW 662
NG CSC DYW
Sbjct: 696 NGECSCKDYW 705
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 141/313 (45%), Gaps = 34/313 (10%)
Query: 106 LTDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEV 165
L D D++ L++ Y +D+AR VFD R + W AL + G+ +
Sbjct: 70 LFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVA 129
Query: 166 LELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIM 225
L+ +M ++ ++T +L GF L+ G+ A L +I
Sbjct: 130 ESLFWKMP------EKNKVSWTVML-------IGF--LQDGRIDDACKLYEMIPDKDNIA 174
Query: 226 -TTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESH 284
T++I + G V A +F +M+ ++V++W+ M+ Y +N +A ++F
Sbjct: 175 RTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF-------- 226
Query: 285 DLCP--NSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVS--ALVTMYARCGK 340
D+ P V+ S+L +E + + + + PV++ A+++ + G+
Sbjct: 227 DVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM------PVKPVIACNAMISGLGQKGE 280
Query: 341 LELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGA 400
+ + VFD M +R+ SW ++I + +G+ +A+ +F M GV P+ + +S+L
Sbjct: 281 IAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSV 340
Query: 401 CSHAGLVEEGKML 413
C+ + GK +
Sbjct: 341 CASLASLHHGKQV 353
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 119/258 (46%), Gaps = 24/258 (9%)
Query: 233 ARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVT 292
+R G + A +F K++ SW++M+A Y N M +A +LF EM N ++
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDR------NIIS 81
Query: 293 MVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMD 352
++ +++ + + + R + S +ALV Y GK+++ + +F M
Sbjct: 82 WNGLVSGYMKNGEIDEARKVFDLMPERNVVSW----TALVKGYVHNGKVDVAESLFWKMP 137
Query: 353 KRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKM 412
+++ VSW ++ + G A +++ EMI I+ S++ G V+E +
Sbjct: 138 EKNKVSWTVMLIGFLQDGRIDDACKLY-EMI---PDKDNIARTSMIHGLCKEGRVDEARE 193
Query: 413 LFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIH 472
+F+ M + +I + MV G+ N++++A KI D+ E W S+L +
Sbjct: 194 IFDEMSERSVIT-----WTTMVTGYGQNNRVDDARKIF-DVMPEKTEVSWTSMLMGYVQN 247
Query: 473 CNVELAERASKRLFELEP 490
+E AE LFE+ P
Sbjct: 248 GRIEDAE----ELFEVMP 261
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 316 ILRRGLDSILPVVSALV--TMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGG 373
+LRR + +P +A V T +R GK+ + +FD D + + SWNS+++ Y +
Sbjct: 6 LLRRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPR 65
Query: 374 KAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMI 423
A ++F EM + IS+ ++ G ++E + +F+ M + +++
Sbjct: 66 DARKLFDEMPDRNI----ISWNGLVSGYMKNGEIDEARKVFDLMPERNVV 111
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 403 bits (1036), Expect = e-111, Method: Compositional matrix adjust.
Identities = 237/662 (35%), Positives = 357/662 (53%), Gaps = 70/662 (10%)
Query: 65 LRQALDVLSIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINV 124
+R D++ PTQ T +L S + VHS + G + + L+N+
Sbjct: 131 IRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNM 190
Query: 125 YSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRM------------ 172
Y+ A+ VFD+ R I WNA+ G+ + + + +M
Sbjct: 191 YAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMI 250
Query: 173 ---NGTGTGIRS---------------DRFTYTYVLKACVASSCGFSLLKHGKEIHASVL 214
N G +R+ DRFT VL AC L GK+IH+ ++
Sbjct: 251 SGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSAC----ANLEKLCIGKQIHSHIV 306
Query: 215 RHGYNGIVHIMTTLIDMYARFGCVMYA---------------GF---------------- 243
G++ ++ LI MY+R G V A GF
Sbjct: 307 TTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQA 366
Query: 244 --VFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACA 301
+F + ++VV+W+AMI Y ++G EA+ LFR M+ PNS T+ ++L +
Sbjct: 367 KNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQR--PNSYTLAAMLSVAS 424
Query: 302 ALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMD-KRDVVSWN 360
+LA+L GK IHG ++ G + V +AL+TMYA+ G + FD + +RD VSW
Sbjct: 425 SLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWT 484
Query: 361 SLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKE 420
S+I + HG+ +A+++F+ M+ G+ P I++V V AC+HAGLV +G+ F+ M+
Sbjct: 485 SMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDV 544
Query: 421 HMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAER 480
I P++ HYACMVDL GRA L+EA + IE + IEP WGSLL +CR+H N++L +
Sbjct: 545 DKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKV 604
Query: 481 ASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQKVPGRSRIEVKRKMY 540
A++RL LEP N+G Y LA++Y+A W+E ++++ ++ ++K G S IEVK K++
Sbjct: 605 AAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVH 664
Query: 541 SFVSVDEFHPQFEQLHALLINLSAEMKEKGYVPQTKVVLYDLDAEEKERIVLGHSEKLAV 600
F D HP+ +++ + + E+K+ GYVP T VL+DL+ E KE+I+ HSEKLA+
Sbjct: 665 VFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAI 724
Query: 601 AFGLINTSKGETIRITKNLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRNGVCSCGD 660
AFGLI+T T+RI KNLR+C DCH+ KFISK +EI+VRD RFHHF++G CSC D
Sbjct: 725 AFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRD 784
Query: 661 YW 662
YW
Sbjct: 785 YW 786
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 210/487 (43%), Gaps = 99/487 (20%)
Query: 85 LLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRR 144
LL S N A VH + +G +L+ L+NVYS AR +FD+ R
Sbjct: 19 LLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLR 78
Query: 145 TIYVWNALFRALTLAGRGEEVLELYRRM-----------------------------NGT 175
T + WN + A + G + E + ++ +
Sbjct: 79 TAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMV 138
Query: 176 GTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARF 235
GI +FT T VL + A+ C ++ GK++H+ +++ G G V + +L++MYA+
Sbjct: 139 KEGIEPTQFTLTNVLASVAATRC----METGKKVHSFIVKLGLRGNVSVSNSLLNMYAKC 194
Query: 236 GCVMYAGFVFSQMAVKNVVSWSAMIAC-------------------------------YA 264
G M A FVF +M V+++ SW+AMIA +
Sbjct: 195 GDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFN 254
Query: 265 RNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSI 324
+ G AL++F +M+ +S L P+ T+ SVL ACA L L GK IH +I+ G D
Sbjct: 255 QRGYDLRALDIFSKMLRDSL-LSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDIS 313
Query: 325 LPVVSALVTMYARCGKLE----------------------------LG-----QCVFDHM 351
V++AL++MY+RCG +E LG + +F +
Sbjct: 314 GIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSL 373
Query: 352 DKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGK 411
RDVV+W ++I Y HG G+AI +F+ M+ G P+ + ++L S + GK
Sbjct: 374 KDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGK 433
Query: 412 MLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRI 471
+ S K I SV ++ + +A + A++ + +R E W S++ +
Sbjct: 434 QIHGSAVKSGEIY-SVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQ 492
Query: 472 HCNVELA 478
H + E A
Sbjct: 493 HGHAEEA 499
Score = 129 bits (324), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 163/360 (45%), Gaps = 53/360 (14%)
Query: 53 NELIQSLCKQGNLRQALDVLSIEP-----NPTQHTYELLLLSCTHHNSLSDALNVHSHLT 107
N +I ++G +ALD+ S +P + T +L +C + L +HSH+
Sbjct: 247 NSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIV 306
Query: 108 DNGFDQDPFLVTKLINVYSHFDSVDDAR-------------------------------- 135
GFD ++ LI++YS V+ AR
Sbjct: 307 TTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQA 366
Query: 136 -HVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACV 194
++F + R + W A+ G E + L+R M G G S Y L A +
Sbjct: 367 KNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNS------YTLAAML 420
Query: 195 ASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAV-KNV 253
+ + + L HGK+IH S ++ G V + LI MYA+ G + A F + ++
Sbjct: 421 SVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDT 480
Query: 254 VSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIH 313
VSW++MI A++G A EALELF M+ME L P+ +T V V AC + QG+
Sbjct: 481 VSWTSMIIALAQHGHAEEALELFETMLMEG--LRPDHITYVGVFSACTHAGLVNQGRQY- 537
Query: 314 GYILRRGLDSILPVVS---ALVTMYARCGKLELGQCVFDHMD-KRDVVSWNSLISSYGVH 369
+ + + +D I+P +S +V ++ R G L+ Q + M + DVV+W SL+S+ VH
Sbjct: 538 -FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVH 596
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 116/326 (35%), Gaps = 82/326 (25%)
Query: 55 LIQSLCKQGNLRQALDVLSIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQD 114
L+ K G++ QA ++ + + +++ H S +A+N+ + G +
Sbjct: 353 LLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPN 412
Query: 115 PFLV-----------------------------------TKLINVYSHFDSVDDARHVFD 139
+ + LI +Y+ ++ A FD
Sbjct: 413 SYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFD 472
Query: 140 KTR-RRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSC 198
R R W ++ AL G EE LEL+ M G+R D TY V AC
Sbjct: 473 LIRCERDTVSWTSMIIALAQHGHAEEALELFETM--LMEGLRPDHITYVGVFSACT---- 526
Query: 199 GFSLLKHGKEIHASVLRHG--YNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSW 256
HA ++ G Y ++ + +I + + C
Sbjct: 527 -----------HAGLVNQGRQYFDMMKDVDKIIPTLSHYAC------------------- 556
Query: 257 SAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYI 316
M+ + R G+ EA E +M +E P+ VT S+L AC ++ GK+ +
Sbjct: 557 --MVDLFGRAGLLQEAQEFIEKMPIE-----PDVVTWGSLLSACRVHKNIDLGKVAAERL 609
Query: 317 LRRGLDSILPVVSALVTMYARCGKLE 342
L ++ SAL +Y+ CGK E
Sbjct: 610 LLLEPENS-GAYSALANLYSACGKWE 634
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 402 bits (1034), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/639 (35%), Positives = 354/639 (55%), Gaps = 40/639 (6%)
Query: 56 IQSLCKQGNLRQALDVLSIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDP 115
I +LC +GNLR+A + + + SCT SL +H L +GF D
Sbjct: 20 IATLCSKGNLREAFQRFRLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDK 79
Query: 116 FLVTKLINVYSHFDSVD-------------------------------DARHVFDKTRRR 144
F+ L+++YS +AR VFD+ R
Sbjct: 80 FICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDR 139
Query: 145 TIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLK 204
+ WNA+ L EE L L+R M+G G D +T L + + S G +
Sbjct: 140 KLTTWNAMIAGLIQFEFNEEGLSLFREMHGLG--FSPDEYT----LGSVFSGSAGLRSVS 193
Query: 205 HGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYA 264
G++IH +++G + + ++L MY R G + V M V+N+V+W+ +I A
Sbjct: 194 IGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNA 253
Query: 265 RNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSI 324
+NG L L++ +M+ PN +T V+VL +C+ LA QG+ IH ++ G S+
Sbjct: 254 QNGCPETVLYLYK--MMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSV 311
Query: 325 LPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIY 384
+ VVS+L++MY++CG L F + D V W+S+IS+YG HG G +AI++F M
Sbjct: 312 VAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAE 371
Query: 385 H-GVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKL 443
+ + ++F+++L ACSH+GL ++G LF+ M +++ +P ++HY C+VDLLGRA L
Sbjct: 372 QTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCL 431
Query: 444 EEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVY 503
++A II + I+ +W +LL +C IH N E+A+R K + +++P ++ YVLLA+V+
Sbjct: 432 DQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVH 491
Query: 504 AAADMWDEVKRVKRLLEARGLQKVPGRSRIEVKRKMYSFVSVDEFHPQFEQLHALLINLS 563
A+A W +V V++ + + ++K G S E K +++ F D + +++++ L L+
Sbjct: 492 ASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELT 551
Query: 564 AEMKEKGYVPQTKVVLYDLDAEEKERIVLGHSEKLAVAFGLINTSKGETIRITKNLRLCE 623
EMK KGY P T VL+D+D EEKE ++ HSEKLAVAF L+ +G IRI KNLR+C
Sbjct: 552 LEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCS 611
Query: 624 DCHSFTKFISKFANKEILVRDVNRFHHFRNGVCSCGDYW 662
DCH K+IS N+EI +RD +RFHHF NG CSCGDYW
Sbjct: 612 DCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 401 bits (1031), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/608 (35%), Positives = 339/608 (55%), Gaps = 43/608 (7%)
Query: 90 CTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVW 149
C + +L+ A +H+H+ G Q L L+NVY + A VFD+ R W
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAW 72
Query: 150 NALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEI 209
++ AL A + L ++ + + +R D F ++ ++KAC + HG+++
Sbjct: 73 ASVLTALNQANLSGKTLSVFSSVGSSSG-LRPDDFVFSALVKACA----NLGSIDHGRQV 127
Query: 210 HASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMA 269
H + Y + ++L+DMYA+ G + A VF + VKN +SW+AM++ YA++G
Sbjct: 128 HCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRK 187
Query: 270 FEALELFR-------------------------------EMIMESHDLCPNSVTMVSVLQ 298
EALELFR EM E D+ + + + S++
Sbjct: 188 EEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDIL-DPLVLSSIVG 246
Query: 299 ACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVS 358
ACA LAA G+ +HG ++ G DS + + +AL+ MYA+C + + +F M RDVVS
Sbjct: 247 ACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVS 306
Query: 359 WNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMR 418
W SLI HG KA+ ++ +M+ HGV P+ ++FV ++ ACSH G VE+G+ LF+SM
Sbjct: 307 WTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMT 366
Query: 419 KEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELA 478
K++ IRPS++HY C++DLLGR+ L+EA +I + P W +LL +C+ ++
Sbjct: 367 KDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMG 426
Query: 479 ERASKRL---FELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQKVPGRSRIEV 535
R + L F+L+ + Y+LL+++YA+A +W +V +R L ++K PG S +EV
Sbjct: 427 IRIADHLVSSFKLK--DPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEV 484
Query: 536 KRKMYSFVSVDEFHPQFEQLHALLINLSAEMK-EKGYVPQTKVVLYDLDAEEKERIVLGH 594
+++ F + + HP E + LL L EM+ GYVP T +L+D+D +EKE+++ H
Sbjct: 485 RKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWH 544
Query: 595 SEKLAVAFGLINTSKGETIRITKNLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRNG 654
SE+ AVA+GL+ G IRI KNLR+C DCH K IS+ +EI+VRD R+HHF+ G
Sbjct: 545 SERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGG 604
Query: 655 VCSCGDYW 662
CSC D+W
Sbjct: 605 KCSCNDFW 612
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 173/365 (47%), Gaps = 33/365 (9%)
Query: 78 PTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHV 137
P + L+ +C + S+ VH H + + D + + L+++Y+ ++ A+ V
Sbjct: 103 PDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAV 162
Query: 138 FDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRM-----------------NGTG---- 176
FD R + W A+ +GR EE LEL+R + +G G
Sbjct: 163 FDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAF 222
Query: 177 ---TGIRSDRFTY--TYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDM 231
T +R +R VL + V + + G+++H V+ G++ V I LIDM
Sbjct: 223 SVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDM 282
Query: 232 YARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSV 291
YA+ V+ A +FS+M ++VVSW+++I A++G A +AL L+ +M+ SH + PN V
Sbjct: 283 YAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMV--SHGVKPNEV 340
Query: 292 TMVSVLQACAALAALEQGKMIHGYILRR-GLDSILPVVSALVTMYARCGKLELGQCVFDH 350
T V ++ AC+ + +E+G+ + + + G+ L + L+ + R G L+ + +
Sbjct: 341 TFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHT 400
Query: 351 MD-KRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFV---SVLGACSHAGL 406
M D +W +L+S+ G G I+I ++ P +++ ++ + S G
Sbjct: 401 MPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGK 460
Query: 407 VEEGK 411
V E +
Sbjct: 461 VSEAR 465
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 76/166 (45%), Gaps = 12/166 (7%)
Query: 297 LQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDV 356
LQ CA L K +H +I++ G+ P+ + LV +Y +CG VFD M RD
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 357 VSWNSLISSYGVHGYGGKAI-QIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGK---- 411
++W S++++ GK + G+ P F +++ AC++ G ++ G+
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 412 -MLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIE 456
+ + +++ S +VD+ + L A + + +R++
Sbjct: 130 HFIVSEYANDEVVKSS------LVDMYAKCGLLNSAKAVFDSIRVK 169
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/615 (35%), Positives = 350/615 (56%), Gaps = 24/615 (3%)
Query: 62 QGNLRQALDVLS------IEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDP 115
G+L+ +L + S I PN + T+ L +C N+L L +H GF+
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPN--EFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMV 142
Query: 116 FLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGT 175
+ L+++YS +++A VF + R++ WNA+ AG G + L+ + M
Sbjct: 143 EVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEA 202
Query: 176 GTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYN--GIVHIMTTLIDMYA 233
R D FT T +LKAC SS G ++ GK+IH ++R G++ I +L+D+Y
Sbjct: 203 NIKERPDEFTLTSLLKAC--SSTG--MIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYV 258
Query: 234 RFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTM 293
+ G + A F Q+ K ++SWS++I YA+ G EA+ LF+ + + + +S +
Sbjct: 259 KCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQI--DSFAL 316
Query: 294 VSVLQACAALAALEQGKMIHGYILR--RGLDSILPVVSALVTMYARCGKLELGQCVFDHM 351
S++ A A L QGK + ++ GL++ V++++V MY +CG ++ + F M
Sbjct: 317 SSIIGVFADFALLRQGKQMQALAVKLPSGLET--SVLNSVVDMYLKCGLVDEAEKCFAEM 374
Query: 352 DKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGK 411
+DV+SW +I+ YG HG G K+++IF EM+ H + P + +++VL ACSH+G+++EG+
Sbjct: 375 QLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGE 434
Query: 412 MLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRI 471
LF + + H I+P VEHYAC+VDLLGRA +L+EA +I+ + I+P +W +LL CR+
Sbjct: 435 ELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRV 494
Query: 472 HCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQKVPGRS 531
H ++EL + K L ++ N NYV+++++Y A W+E + L +GL+K G S
Sbjct: 495 HGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMS 554
Query: 532 RIEVKRKMYSFVSVDEFHPQFEQLHALLINLSAEMKEK-GYVPQTKVVLYDLDAEEKERI 590
+E++R+++ F S ++ HP + L ++E+ GYV K L+D+D E KE
Sbjct: 555 WVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEEN 614
Query: 591 VLGHSEKLAVAFGLIN---TSKGETIRITKNLRLCEDCHSFTKFISKFANKEILVRDVNR 647
+ HSEKLA+ L KG+TIR+ KNLR+C DCH F K +SK +VRD R
Sbjct: 615 LRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVR 674
Query: 648 FHHFRNGVCSCGDYW 662
FH F +G CSCGDYW
Sbjct: 675 FHSFEDGCCSCGDYW 689
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 167/340 (49%), Gaps = 9/340 (2%)
Query: 76 PNPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDAR 135
PN Q+ +L + CT VH +L +G + LI++Y A
Sbjct: 3 PNQRQNLVSILRV-CTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAY 61
Query: 136 HVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVA 195
VFD R + W+AL L G + L L+ M GI + FT++ LKAC
Sbjct: 62 KVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG--RQGIYPNEFTFSTNLKACGL 119
Query: 196 SSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVS 255
+ L+ G +IH L+ G+ +V + +L+DMY++ G + A VF ++ ++++S
Sbjct: 120 ----LNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLIS 175
Query: 256 WSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGY 315
W+AMIA + G +AL+ F M + P+ T+ S+L+AC++ + GK IHG+
Sbjct: 176 WNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGF 235
Query: 316 ILRRGL--DSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGG 373
++R G S + +LV +Y +CG L + FD + ++ ++SW+SLI Y G
Sbjct: 236 LVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFV 295
Query: 374 KAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKML 413
+A+ +FK + + S++G + L+ +GK +
Sbjct: 296 EAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQM 335
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 144/291 (49%), Gaps = 10/291 (3%)
Query: 179 IRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCV 238
I + R +L+ C L G ++H +L+ G + LIDMY +
Sbjct: 2 IPNQRQNLVSILRVCTRKG----LSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREP 57
Query: 239 MYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQ 298
+ A VF M +NVVSWSA+++ + NG +L LF EM + PN T + L+
Sbjct: 58 LMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEM--GRQGIYPNEFTFSTNLK 115
Query: 299 ACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVS 358
AC L ALE+G IHG+ L+ G + ++ V ++LV MY++CG++ + VF + R ++S
Sbjct: 116 ACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLIS 175
Query: 359 WNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISF--VSVLGACSHAGLVEEGKMLFES 416
WN++I+ + GYG KA+ F M + P F S+L ACS G++ GK +
Sbjct: 176 WNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGF 235
Query: 417 MRKEHMIRPSVEHY-ACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLL 466
+ + PS +VDL + L A K + ++ E W SL+
Sbjct: 236 LVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK-EKTMISWSSLI 285
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 160/328 (48%), Gaps = 18/328 (5%)
Query: 53 NELIQSLCKQGNLRQALDVL------SIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHL 106
N +I G +ALD +I+ P + T LL +C+ + +H L
Sbjct: 177 NAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFL 236
Query: 107 TDNGF--DQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEE 164
+GF + L+++Y + AR FD+ + +T+ W++L G E
Sbjct: 237 VRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVE 296
Query: 165 VLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHI 224
+ L++R+ + I S + L + + F+LL+ GK++ A ++ +
Sbjct: 297 AMGLFKRLQELNSQIDS------FALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSV 350
Query: 225 MTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESH 284
+ +++DMY + G V A F++M +K+V+SW+ +I Y ++G+ +++ +F EM+ H
Sbjct: 351 LNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEML--RH 408
Query: 285 DLCPNSVTMVSVLQACAALAALEQGKMIHGYILR-RGLDSILPVVSALVTMYARCGKLEL 343
++ P+ V ++VL AC+ +++G+ + +L G+ + + +V + R G+L+
Sbjct: 409 NIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKE 468
Query: 344 GQCVFDHMD-KRDVVSWNSLISSYGVHG 370
+ + D M K +V W +L+S VHG
Sbjct: 469 AKHLIDTMPIKPNVGIWQTLLSLCRVHG 496
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 244,620,215
Number of Sequences: 539616
Number of extensions: 10215390
Number of successful extensions: 30260
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 341
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 24269
Number of HSP's gapped (non-prelim): 1911
length of query: 662
length of database: 191,569,459
effective HSP length: 124
effective length of query: 538
effective length of database: 124,657,075
effective search space: 67065506350
effective search space used: 67065506350
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)