Query         006078
Match_columns 662
No_of_seqs    474 out of 3276
Neff          7.3 
Searched_HMMs 29240
Date          Mon Mar 25 15:22:31 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006078.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006078hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1v0w_A Phospholipase D; hydrol 100.0 2.4E-31 8.1E-36  299.0  20.1  275  203-567    66-373 (506)
  2 3hsi_A Phosphatidylserine synt  99.9 3.3E-26 1.1E-30  252.8  21.8  261  167-567    22-309 (458)
  3 2fk9_A Protein kinase C, ETA t  99.9 2.4E-23 8.1E-28  197.5  13.7  124    4-142    25-156 (157)
  4 1gmi_A Protein kinase C, epsil  99.9 4.3E-22 1.5E-26  184.3  13.5  127    5-144     3-134 (136)
  5 2dmh_A Myoferlin; beta-sandwic  99.9 2.3E-21   8E-26  179.9  15.2  124    6-146     5-136 (140)
  6 1wfj_A Putative elicitor-respo  99.9 1.3E-21 4.3E-26  180.8  12.0  125    5-147     7-134 (136)
  7 2ep6_A MCTP2 protein; beta san  99.9   2E-21   7E-26  178.9  13.0  122    5-143    10-132 (133)
  8 3b7y_A E3 ubiquitin-protein li  99.9 3.6E-21 1.2E-25  181.5  14.8  124    6-143    18-153 (153)
  9 3kwu_A MUNC13-1; calcium bindi  99.9 1.9E-20 6.4E-25  175.5  18.4  121    5-142    14-146 (148)
 10 1rlw_A Phospholipase A2, CALB   99.8 5.2E-21 1.8E-25  174.1  12.4  121    7-143     2-125 (126)
 11 3m7f_B E3 ubiquitin-protein li  99.8 2.7E-20 9.1E-25  180.0  15.9  125    6-144     6-142 (176)
 12 3pyc_A E3 ubiquitin-protein li  99.8 1.3E-19 4.5E-24  166.5  14.2  121    7-141     4-131 (132)
 13 2nq3_A Itchy homolog E3 ubiqui  99.8 1.2E-19 4.1E-24  175.2  13.4  126    4-145    32-163 (173)
 14 2b3r_A Phosphatidylinositol-4-  99.8 6.4E-19 2.2E-23  162.7  13.5  104    6-123    18-130 (134)
 15 1rsy_A Synaptotagmin I; calciu  99.8   1E-18 3.6E-23  164.6  12.5  105    6-123    40-150 (152)
 16 3f04_A Synaptotagmin-1; C2A, c  99.8   1E-18 3.5E-23  162.7  11.0  105    6-123    32-142 (143)
 17 2z0u_A WW domain-containing pr  99.8 5.2E-19 1.8E-23  167.6   9.1  103    7-122    42-154 (155)
 18 2d8k_A Synaptotagmin VII; exoc  99.8   2E-18   7E-23  160.3  12.9  106    6-124    24-136 (141)
 19 1a25_A CALB, protein kinase C   99.8 2.4E-18 8.2E-23  161.5  12.7  104    6-123    29-139 (149)
 20 2q3x_A Regulating synaptic mem  99.8 1.5E-18 5.3E-23  166.9  11.6  106    6-124    28-140 (171)
 21 2r83_A Synaptotagmin-1; C2A-C2  99.8 5.8E-18   2E-22  175.6  16.5  126    6-144    17-148 (284)
 22 1rh8_A Piccolo protein; beta-s  99.8 5.1E-19 1.7E-23  164.4   7.5  106    6-124    16-139 (142)
 23 2bwq_A Regulating synaptic mem  99.8 2.7E-18 9.3E-23  156.7  12.2  101    7-121    17-128 (129)
 24 3fbk_A RGS3, RGP3, regulator o  99.8 2.2E-18 7.5E-23  162.6  11.7  106    6-125    25-139 (153)
 25 1xdp_A Polyphosphate kinase; P  99.8 6.8E-18 2.3E-22  193.4  18.0  203  203-563   347-562 (687)
 26 1v27_A Regulating synaptic mem  99.8 2.1E-18 7.2E-23  159.8  10.9  105    7-125    20-135 (141)
 27 3fdw_A Synaptotagmin-like prot  99.8 1.2E-18   4E-23  163.4   9.2  109    7-127    22-138 (148)
 28 3rdl_A Protein kinase C alpha   99.8 2.7E-18 9.2E-23  158.3  11.4  105    6-124    14-125 (137)
 29 1wfm_A Synaptotagmin XIII; C2   99.7 4.2E-18 1.4E-22  157.9  11.7  102    7-124    25-133 (138)
 30 2dmg_A KIAA1228 protein; beta-  99.7 2.7E-18 9.1E-23  159.7  10.0  105    7-125    23-137 (142)
 31 2chd_A Rabphilin-3A, exophilin  99.7 6.5E-18 2.2E-22  157.0  11.7  105    6-123    27-140 (142)
 32 2cjt_A UNC-13 homolog A, MUNC1  99.7 1.3E-17 4.3E-22  153.5  11.7  117    6-141     3-130 (131)
 33 3n5a_A Synaptotagmin-7; calciu  99.7 1.7E-17 5.9E-22  152.9  12.2  106    7-127    15-128 (138)
 34 2cm5_A Rabphilin-3A; protein t  99.7 2.5E-17 8.5E-22  157.4  13.3   90    7-109    36-133 (166)
 35 1ugk_A Synaptotagmin IV, KIAA1  99.7 2.2E-17 7.5E-22  152.8  12.3  105    6-123    20-133 (138)
 36 1tjx_A Similar to synaptotagmi  99.7 2.5E-17 8.5E-22  156.2  13.0  105    6-123    23-147 (159)
 37 3l9b_A Otoferlin; C2-domain, b  99.7 2.3E-17   8E-22  151.2  11.9  118    8-145    21-142 (144)
 38 1w15_A Synaptotagmin IV; metal  99.7 5.6E-18 1.9E-22  159.6   7.7  106    7-127    29-142 (153)
 39 2enp_A B/K protein; C2 type 1,  99.7   1E-17 3.5E-22  156.7   8.8  110    7-123    25-141 (147)
 40 2o8r_A Polyphosphate kinase; s  99.7 3.6E-17 1.2E-21  186.2  14.8  207  202-563   351-569 (705)
 41 4ggj_A Mitochondrial cardiolip  99.7 6.4E-17 2.2E-21  159.2  13.3  134  203-425    46-179 (196)
 42 2cjs_A UNC-13 homolog A, MUNC1  99.7 1.3E-16 4.3E-21  153.0  10.9  118    7-142    13-140 (167)
 43 1dqv_A Synaptotagmin III; beta  99.7 3.1E-16 1.1E-20  163.9  13.1  123    7-143    19-149 (296)
 44 1djx_A PLC-D1, phosphoinositid  99.6 5.8E-16   2E-20  177.1  14.7  123    6-142   495-623 (624)
 45 3jzy_A Intersectin 2; C2 domai  99.6 9.8E-16 3.3E-20  171.8  13.9  116    7-142   386-507 (510)
 46 3bxj_A RAS GTPase-activating p  99.6 2.7E-17 9.4E-22  183.3   0.0  121    6-144     9-158 (483)
 47 1byr_A Protein (endonuclease);  99.6 1.9E-15 6.4E-20  142.2  12.5  133  203-423    14-148 (155)
 48 3nsj_A Perforin-1; pore formin  99.6 2.3E-15   8E-20  168.8  14.8  110    7-144   393-505 (540)
 49 1cjy_A CPLA2, protein (cytosol  99.6 7.6E-16 2.6E-20  177.8   6.8  133    6-151    16-158 (749)
 50 4gel_A Mitochondrial cardiolip  99.6   4E-15 1.4E-19  148.6   8.9  150  202-424    57-210 (220)
 51 2r83_A Synaptotagmin-1; C2A-C2  99.6   2E-14 6.7E-19  148.9  13.3  104    7-123   149-272 (284)
 52 1dqv_A Synaptotagmin III; beta  99.5 1.1E-14 3.6E-19  152.3   3.4  108    7-128   151-266 (296)
 53 2zkm_X 1-phosphatidylinositol-  99.5 1.4E-13 4.8E-18  161.2  12.6  114    6-142   676-798 (799)
 54 3qr0_A Phospholipase C-beta (P  99.5 1.8E-13 6.2E-18  159.6  12.5  114    7-143   649-771 (816)
 55 3ohm_B 1-phosphatidylinositol-  99.4 1.7E-13 5.9E-18  160.6  11.8  114    7-143   724-845 (885)
 56 3pfq_A PKC-B, PKC-beta, protei  99.3   3E-12   1E-16  148.5  10.5  105    6-124   170-281 (674)
 57 1yrk_A NPKC-delta, protein kin  99.3 4.3E-11 1.5E-15  106.6  13.8  109    7-142     5-124 (126)
 58 2enj_A NPKC-theta, protein kin  99.3 3.5E-11 1.2E-15  108.6  12.0  113    6-142     8-129 (138)
 59 3hsi_A Phosphatidylserine synt  98.7 2.3E-08 7.9E-13  110.3  10.5  144  203-424   258-420 (458)
 60 1byr_A Protein (endonuclease);  98.6 3.3E-07 1.1E-11   85.5  11.6   71  492-604    13-83  (155)
 61 1v0w_A Phospholipase D; hydrol  98.6 2.4E-07 8.3E-12  103.7  12.0  156  204-423   315-491 (506)
 62 4ggj_A Mitochondrial cardiolip  98.3 1.7E-06   6E-11   84.5   8.9   49  492-564    45-93  (196)
 63 1xdp_A Polyphosphate kinase; P  97.8 2.7E-05 9.2E-10   89.4   7.5   69  496-604   350-423 (687)
 64 4gel_A Mitochondrial cardiolip  97.6 0.00024 8.2E-09   70.1  10.2   50  492-565    57-106 (220)
 65 2o8r_A Polyphosphate kinase; s  96.7  0.0041 1.4E-07   71.2   9.6   70  495-604   354-428 (705)
 66 2f5t_X Archaeal transcriptiona  93.8   0.068 2.3E-06   53.1   5.7   50  203-268    10-59  (233)
 67 3qph_A TRMB, A global transcri  93.5    0.16 5.3E-06   53.5   8.2   47  203-265   119-165 (342)
 68 2wxf_A Phosphatidylinositol-4,  88.9     1.4 4.9E-05   52.2  10.7   87    6-108   215-323 (940)
 69 3l4c_A Dedicator of cytokinesi  88.7     1.1 3.9E-05   43.7   8.1   38   55-93     79-119 (220)
 70 3hhm_A Phosphatidylinositol-4,  85.8     2.4 8.2E-05   50.8  10.1   98    6-118   353-469 (1091)
 71 2yrb_A Protein fantom; beta sa  81.0     8.1 0.00028   35.6   9.5  122    8-144    18-151 (156)
 72 3qph_A TRMB, A global transcri  78.8     3.1  0.0001   43.5   6.8   53  491-567   117-169 (342)
 73 1e7u_A Phosphatidylinositol 3-  77.7     7.3 0.00025   46.2  10.2   88    7-108   217-329 (961)
 74 2y3a_A Phosphatidylinositol-4,  70.8     2.8 9.6E-05   50.4   4.4   69    7-91    352-429 (1092)
 75 2f5t_X Archaeal transcriptiona  70.0     8.8  0.0003   37.8   7.2   52  491-566     8-59  (233)
 76 2c1l_A Restriction endonucleas  23.6 1.4E+02  0.0046   29.6   6.3   80  243-356    49-128 (358)
 77 2l82_A Designed protein OR32;   22.9 1.1E+02  0.0038   26.0   4.9   46  245-302    90-135 (162)
 78 2qzq_A Axin interactor, dorsal  21.6 4.5E+02   0.015   23.8  10.4   74   40-113    31-117 (152)

No 1  
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A*
Probab=99.97  E-value=2.4e-31  Score=299.03  Aligned_cols=275  Identities=19%  Similarity=0.136  Sum_probs=169.3

Q ss_pred             chHHHHHHHHHcCCcEEEEEEEee-eceeEEecCCCCCCCCCcchHHHHHHHHhhcC--CeEEEEEecCccccccccccC
Q 006078          203 RCWEDIFDAITNARHMIYITGWSV-YTEISLVRDSRRPKPGGDIMLGELLKKKASEG--VRVCMLVWDDRTSVSLLKKDG  279 (662)
Q Consensus       203 ~~~~~l~~aI~~Ak~~I~I~~w~~-~p~~~L~r~~~~~~~~~~~~l~~lL~~kA~~G--V~VrvLlwd~~~s~~~~~~~~  279 (662)
                      ++|++|+++|++||++|+|++|++ .       ++.     .+.+|.++|++||+||  |+||||+ |+.|+....    
T Consensus        66 ~~~~~l~~~I~~Ak~~I~i~~y~~~~-------~d~-----~g~~i~~aL~~aa~rGp~V~Vril~-D~~g~~~~~----  128 (506)
T 1v0w_A           66 RLLAKMTENIGNATRTVDISTLAPFP-------NGA-----FQDAIVAGLKESAAKGNKLKVRILV-GAAPVYHMN----  128 (506)
T ss_dssp             HHHHHHHHHHHTCSSEEEEEEESSCC-------CHH-----HHHHHHHHHHHHHHTTCCEEEEEEE-ECCC--CCC----
T ss_pred             HHHHHHHHHHHHhccEEEEEEeeccC-------CCh-----HHHHHHHHHHHHHhCCCCcEEEEEE-eCccccccc----
Confidence            578999999999999999999984 3       232     4679999999999999  9999996 776543210    


Q ss_pred             ccCCChHHHHhhhcCCCcEEEecC--CCCCCCCCcccccccccccCCccceEEEcCCCCCCCccccceeEEeccccCcCc
Q 006078          280 LMATHDEETEKFFQGTDVHCILCP--RNPDDGGSFIQDIQISAMFTHHQKIVVVDSPMPNGDPERRRIMSFVGGIDLCDG  357 (662)
Q Consensus       280 ~~~~~~~~~~~~l~~~~v~~~~~~--r~p~~~~~~~~~~~~~~~~~hHqK~vVID~~~~~~~~~~~~~vafvGG~nl~~~  357 (662)
                         .....+.+.|+.+|+++..+.  +.+.    +  ......+.+||+|++|||++           +||+||+|++++
T Consensus       129 ---~~~~~~~~~L~~~g~~~~~~~~~~~~~----~--~~~~~~~~r~H~K~~ViD~~-----------~a~~Gg~Nl~~d  188 (506)
T 1v0w_A          129 ---VIPSKYRDELTAKLGKAAENITLNVAS----M--TTSKTAFSWNHSKILVVDGQ-----------SALTGGINSWKD  188 (506)
T ss_dssp             ---CHHHHHHHHHHHHHGGGGGGEEEEEEE----E--CSBTTTTBCBCCCEEEETTT-----------EEEEESCCCCHH
T ss_pred             ---cCCHHHHHHHHhcccceeecCcccccc----c--cccCCccccceeeEEEECCc-----------EEEeeccccCcc
Confidence               012355666666554321000  0000    0  00001234999999999999           999999999876


Q ss_pred             cccCCCCcccccCCCcCCCCCCCCCCCCCCcCCCCCCCCeeeeeeeeeCHHHHHHHHHHHHHHHhhcC--Cccc----cc
Q 006078          358 RYDTPFHSLFRTLDTAHHDDFHQPNFPGASIEKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGG--KDVL----VH  431 (662)
Q Consensus       358 r~dt~~H~l~~~~~~~~~~d~~~~~~~~~~~~~~~pr~pWhDv~~~v~Gpaa~dl~~~F~qrW~~~~~--~~~l----~~  431 (662)
                      +|.+                               ...+|||++++++||+|.+++..|.++|+....  ..+.    ..
T Consensus       189 ~y~~-------------------------------~~~~~~D~~v~i~G~~v~~l~~~F~~~W~~~~~~~~~~~~~~~~~  237 (506)
T 1v0w_A          189 DYLD-------------------------------TTHPVSDVDLALTGPAAGSAGRYLDTLWTWTCQNKSNIASVWFAA  237 (506)
T ss_dssp             HHTS-------------------------------SSSCCBEEEEEEESHHHHHHHHHHHHHHHHHHHTTTSTTTEEEEE
T ss_pred             cccc-------------------------------CCCCceEEEEEEECHHHHHHHHHHHHHHhhhccccCChhhhcccc
Confidence            6742                               014899999999999999999999999996542  1110    00


Q ss_pred             c---cccCcc---cCCCCCCCCCCCCCCce--------eeEEeeccCCcCCCCCCChhHHhhcccccCCCCc--------
Q 006078          432 L---RELGDI---IIPPSPVMYPDDHDTWN--------VQLFRSIDGGAAFGFPETPEDAARAGLVSGKDNI--------  489 (662)
Q Consensus       432 ~---~~~~~~---~~P~~~~~~~~~~~~~~--------vQv~rS~~~~s~~~~p~~~~~~~~~~l~~g~~~~--------  489 (662)
                      .   ...+..   +.|..   .+ ..+...        +|++++.+......+..+   +...-++++.+..        
T Consensus       238 ~~~~~~~~~~~~~~~p~~---~~-~~~~~~~~~~~~~~~~i~~~~P~~~~~~~~w~---~~~~~~~~d~P~~~~~~~~~~  310 (506)
T 1v0w_A          238 SGNAGCMPTMHKDTNPKA---SP-ATGNVPVIAVGGLGVGIKDVDPKSTFRPDLPT---ASDTKCVVGLHDNTNADRDYD  310 (506)
T ss_dssp             STTCCCCTTHHHHHSCSS---CC-CCSSEEEEEEECCCSSSCSCCTTCCCCCCCCC---CSSSCSSTTCCCTTTSCHHHH
T ss_pred             ccccccCchhccccCccc---Cc-ccccccceecccccceeecCCccccccccCcc---cccceeeccccccccCccccc
Confidence            0   000000   01110   01 123333        334433321000000000   0011122222211        


Q ss_pred             chhHHHHHHHHHHHhccceEEEeeccccccccccccCCCCCccccccccchHHHHHHHHHHHhcCCceEEEEEecCCC
Q 006078          490 IDRSIQDAYIHAIRRAKNFIYIENQYFLGSSFAWSADGIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWP  567 (662)
Q Consensus       490 ~e~sI~~ay~~aI~~A~~~IYIEnqYFi~~~~~w~~~~~~~~~~~~~n~i~~~l~~~i~~A~~~g~~~~V~Iv~P~~p  567 (662)
                      .+.++.++|+++|.+||++|||++|||.+-..   +.          ..+...|+++|..|+++|  |+|+||+|..+
T Consensus       311 ~~~~~~~~~~~~I~~A~~~I~I~tq~~~pyf~---p~----------~~~~~~i~~aL~~Aa~rG--V~VrIl~~~~~  373 (506)
T 1v0w_A          311 TVNPEESALRALVASAKGHIEISQQDLNATCP---PL----------PRYDIRLYDALAAKMAAG--VKVRIVVSDPA  373 (506)
T ss_dssp             HHCHHHHHHHHHHHTCSSEEEEEESCSSCCTT---TS----------CSCCHHHHHHHHHHHHTT--CEEEEEECCGG
T ss_pred             ccccHHHHHHHHHhCcCcEEEEEecccccccc---Cc----------ccchHHHHHHHHHHHhCC--CcEEEEeCCCC
Confidence            14679999999999999999999965553210   00          011237999999999999  99999999875


No 2  
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae}
Probab=99.94  E-value=3.3e-26  Score=252.80  Aligned_cols=261  Identities=13%  Similarity=0.031  Sum_probs=171.2

Q ss_pred             cccccCceeeEcccCCCCCCCCCceecCCCcccCCcchHHHHHHHHHcCCcEEEEEEEeeeceeEEecCCCCCCCCCcch
Q 006078          167 YPQRKGCKVSLYQDAHVPDNFVPEIPLAGGKYYEPHRCWEDIFDAITNARHMIYITGWSVYTEISLVRDSRRPKPGGDIM  246 (662)
Q Consensus       167 ~p~~~g~~v~l~~d~h~~~~~~p~~~l~~g~~~~~~~~~~~l~~aI~~Ak~~I~I~~w~~~p~~~L~r~~~~~~~~~~~~  246 (662)
                      ||. .||+|++|.++                    .++|++++++|++||++|+|++|+|.+       |+     .+..
T Consensus        22 ~~~-~~n~v~~l~~g--------------------~~~~~~l~~~I~~A~~~I~i~~~~~~~-------d~-----~g~~   68 (458)
T 3hsi_A           22 LAL-QAEQIEFLGSS--------------------AEFKTQIIELIRNAKKRIYVTALYWQK-------DE-----AGQE   68 (458)
T ss_dssp             EEC-CGGGEEECCCH--------------------HHHHHHHHHHHHTCSSEEEEEESCBCS-------SH-----HHHH
T ss_pred             ccc-cCCeEEEEeCH--------------------HHHHHHHHHHHHhcCCEEEEEEEEEec-------Cc-----HHHH
Confidence            444 68999999984                    256899999999999999999998853       33     4679


Q ss_pred             HHHHHHHHhhc--CCeEEEEEecCc-------cccccccccCccCCChHHHHhhhcCCC--cEEE--ecCCCCCCCCCcc
Q 006078          247 LGELLKKKASE--GVRVCMLVWDDR-------TSVSLLKKDGLMATHDEETEKFFQGTD--VHCI--LCPRNPDDGGSFI  313 (662)
Q Consensus       247 l~~lL~~kA~~--GV~VrvLlwd~~-------~s~~~~~~~~~~~~~~~~~~~~l~~~~--v~~~--~~~r~p~~~~~~~  313 (662)
                      |.++|.+||++  ||+||||+ |+.       |+....        ....+...|.++|  |+|.  +|. .|..     
T Consensus        69 l~~aL~~aa~r~~GV~Vril~-D~~~~~r~~~g~~~~~--------~~~~~~~~L~~~g~nv~v~~~~f~-~p~~-----  133 (458)
T 3hsi_A           69 ILDEIYRVKQENPHLDVKVLI-DWHRAQRNLLGAEKSA--------TNADWYCEQRQTYQLPDDPNMFFG-VPIN-----  133 (458)
T ss_dssp             HHHHHHHHHHHSTTCEEEEEE-ETTGGGSCCC-----C--------CHHHHHHHHHHHHTCTTCCCCEEE-ECSS-----
T ss_pred             HHHHHHHHHhcCCCCEEEEEE-ECcccccccccccccc--------ccHHHHHHHHhhCCCceEeeeecC-Cccc-----
Confidence            99999999999  99999996 883       332110        0134556665555  6666  553 1211     


Q ss_pred             cccccccccCCccceEEEcCCCCCCCccccceeEEeccccCcCccccCCCCcccccCCCcCCCCCCCCCCCCCCcCCCCC
Q 006078          314 QDIQISAMFTHHQKIVVVDSPMPNGDPERRRIMSFVGGIDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFPGASIEKGGP  393 (662)
Q Consensus       314 ~~~~~~~~~~hHqK~vVID~~~~~~~~~~~~~vafvGG~nl~~~r~dt~~H~l~~~~~~~~~~d~~~~~~~~~~~~~~~p  393 (662)
                         ....+.++|+|++|||++           + ++||+||+++|+..                             ...
T Consensus       134 ---~~~~~~r~H~Ki~viD~~-----------v-~~~G~Ni~d~y~~~-----------------------------~~~  169 (458)
T 3hsi_A          134 ---TREVFGVLHVKGFVFDDT-----------V-LYSGASINNVYLHQ-----------------------------FEK  169 (458)
T ss_dssp             ---SSGGGCCEECCEEEETTE-----------E-EEESCCBSTTTTTC-----------------------------SSC
T ss_pred             ---cccccCcceeeEEEECCC-----------E-EEEeeecCHHHhcC-----------------------------Ccc
Confidence               113567999999999998           8 55669999987641                             011


Q ss_pred             CCCeeeeeeeeeCHHHHHHHHHHHH--HHHhhcCCccc---ccc-cc-------cCcccCCCCCCCCCC-CCCCceeeEE
Q 006078          394 REPWHDIHSRLEGPIAWDVLFNFEQ--RWRKQGGKDVL---VHL-RE-------LGDIIIPPSPVMYPD-DHDTWNVQLF  459 (662)
Q Consensus       394 r~pWhDv~~~v~Gpaa~dl~~~F~q--rW~~~~~~~~l---~~~-~~-------~~~~~~P~~~~~~~~-~~~~~~vQv~  459 (662)
                      ...|+|+.  +.||.+.|....|.+  .|+...-..+.   ... ..       +...+.+.....++. ..+...+|+.
T Consensus       170 ~~~drd~~--i~g~~~~D~~~~~~~~~~~~g~~v~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~  247 (458)
T 3hsi_A          170 YRYDRYQK--ITHAELADSMVNFINDYLLDFSAVYPLDVTNRPRTKEIRGNIRAYRKDLAQNGEYSLKSAVKLPNVLSVS  247 (458)
T ss_dssp             CEECCEEE--EECHHHHHHHHHHHHHTTCCTTTCEESSSSCCCCGGGTHHHHHHHHHHHHHHCCCCCSSCBSSCSSCEEE
T ss_pred             cCcchhhh--hcCchHHHHHHHHHHhhhhcCccchhhHHHhcccchhhHHHHHHHHHhhhhcccccccccCCCCceEEEe
Confidence            23588854  899999999999944  46422110000   000 00       000000000000110 0111223443


Q ss_pred             eeccCCcCCCCCCChhHHhhcccccCCCCcchhHHHHHHHHHHHhccceEEEeeccccccccccccCCCCCccccccccc
Q 006078          460 RSIDGGAAFGFPETPEDAARAGLVSGKDNIIDRSIQDAYIHAIRRAKNFIYIENQYFLGSSFAWSADGIKPEEINALHLI  539 (662)
Q Consensus       460 rS~~~~s~~~~p~~~~~~~~~~l~~g~~~~~e~sI~~ay~~aI~~A~~~IYIEnqYFi~~~~~w~~~~~~~~~~~~~n~i  539 (662)
                      ...                      |++ ..+..+..+|+++|.+|+++|||+|+||+++.                   
T Consensus       248 p~~----------------------~~~-~~~~~i~~~~~~lI~~A~~~I~I~tpYf~p~~-------------------  285 (458)
T 3hsi_A          248 PLF----------------------GLG-ASGNELNQVIEDLFLQVQKKLVICTPYFNFPR-------------------  285 (458)
T ss_dssp             EEE----------------------EES-SSSCHHHHHHHHHHHTCSSEEEEECSSSCCCH-------------------
T ss_pred             cCC----------------------CCC-CchhHHHHHHHHHHHhcccEEEEEEeccCCCH-------------------
Confidence            311                      111 12568999999999999999999999999875                   


Q ss_pred             hHHHHHHHHHHHhcCCceEEEEEecCCC
Q 006078          540 PKELSLKIVSKIEAGERFTVYIVVPMWP  567 (662)
Q Consensus       540 ~~~l~~~i~~A~~~g~~~~V~Iv~P~~p  567 (662)
                        ++..+|..|+++|  |+|.||+|...
T Consensus       286 --~~~~aL~~Aa~rG--V~VrIi~~~~~  309 (458)
T 3hsi_A          286 --TLQHKIATLLENG--KRVEIIVGDKV  309 (458)
T ss_dssp             --HHHHHHHHHHTTT--CEEEEEEECGG
T ss_pred             --HHHHHHHHHHHCC--CeEEEEECCcc
Confidence              7999999999999  99999999863


No 3  
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.90  E-value=2.4e-23  Score=197.52  Aligned_cols=124  Identities=22%  Similarity=0.421  Sum_probs=104.5

Q ss_pred             cceeEEEEEEEEEeecCCCCCCC-C--ccccccCCCCCCCCCcEEEEEECCeeeeeeeeecCCCCCCeeeeEEEEeccCC
Q 006078            4 ILLHGTLHVTIYEVDQLESGGGG-N--FFTKLLGGLGKGGSELYATIDLEKARVGRTRMLKKEQSNPRWYESFHIYCAHM   80 (662)
Q Consensus         4 ~~~~G~L~V~I~eA~~L~~~~~~-~--~~~~~~~~~~~g~~DPYv~v~l~~~~~~kT~vi~~~t~nP~WNE~F~~~v~~~   80 (662)
                      ++++|.|+|+|++|++|++++.. .  +|+     ...|++||||+|++++++++||+++++ |+||+|||+|.|.+.+ 
T Consensus        25 ~~~~g~L~V~VieA~~L~~~D~~~~~~~f~-----~~~g~sDPYv~v~l~~~~~~kT~v~~k-tlnP~WNE~F~f~v~~-   97 (157)
T 2fk9_A           25 MKFNGYLRVRIGEAVGLQPTRWSLRHSLFK-----KGHQLLDPYLTVSVDQVRVGQTSTKQK-TNKPTYNEEFCANVTD-   97 (157)
T ss_dssp             CCEEEEEEEEEEEEECCCCCHHHHHTTTSS-----SSCCCCCEEEEEEETTEEEEECCCCSS-CSSCEEEEEEEEEEEE-
T ss_pred             ccCccEEEEEEEEEECCCCccccccccccc-----cCCCCCCeEEEEEECCEeeEEeeecCC-CCCCccCcEEEEEcCC-
Confidence            47899999999999999974210 0  121     124779999999999988889999999 9999999999999864 


Q ss_pred             CceEEEEEEecCCCC-CceeEEEEeeeeeecCC----ceEEEEEeccCCCCCCCCCCCceEEEEEee
Q 006078           81 ASNIIFTVKDDNPIG-ATLIGRAYVPVEEVLGG----EEVDKWVEILDEDRNPISSGSKIHVKLQYF  142 (662)
Q Consensus        81 ~~~L~~~V~D~d~~~-~~~IG~~~ipl~~l~~g----~~~~~w~~L~~~~~k~~k~~G~i~l~l~f~  142 (662)
                      ...|.|+|||+|.++ +++||++.|||+++..+    +..+.||+|.        ..|+|+|+++|.
T Consensus        98 ~~~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~--------~~G~i~l~l~~~  156 (157)
T 2fk9_A           98 GGHLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLE--------PEGKVFVVITLT  156 (157)
T ss_dssp             ECEEEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECB--------SSCEEEEEEEEC
T ss_pred             CCEEEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECC--------CCcEEEEEEEEE
Confidence            468999999999998 69999999999999855    7889999994        258999999984


No 4  
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.87  E-value=4.3e-22  Score=184.27  Aligned_cols=127  Identities=20%  Similarity=0.374  Sum_probs=104.2

Q ss_pred             ceeEEEEEEEEEeecCCCCCCCCccccc--cCCCCCCCCCcEEEEEECCeeeeeeeeecCCCCCCeeeeEEEEeccCCCc
Q 006078            5 LLHGTLHVTIYEVDQLESGGGGNFFTKL--LGGLGKGGSELYATIDLEKARVGRTRMLKKEQSNPRWYESFHIYCAHMAS   82 (662)
Q Consensus         5 ~~~G~L~V~I~eA~~L~~~~~~~~~~~~--~~~~~~g~~DPYv~v~l~~~~~~kT~vi~~~t~nP~WNE~F~~~v~~~~~   82 (662)
                      +++|.|+|+|++|++|++.   +.+++.  .++...+.+||||+|++++.++.||+++++ |+||+|||+|.|.+.+. +
T Consensus         3 ~~~g~L~v~v~~a~~L~~~---d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~-t~nP~WnE~f~f~v~~~-~   77 (136)
T 1gmi_A            3 VFNGLLKIKICEAVSLKPT---AWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQK-TNSPAWHDEFVTDVCNG-R   77 (136)
T ss_dssp             CEEEEEEEEEEEEESCCCC---HHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSS-CSSCEEEEEEEEEEEEE-C
T ss_pred             ccceEEEEEEEeCcCCCCc---ccccccccccccCCcCcCcEEEEEECCeEeeeeeEECC-CcCCccCCEEEEEecCC-C
Confidence            5899999999999999974   332210  001123459999999999888789999999 99999999999998655 7


Q ss_pred             eEEEEEEecCCCC-CceeEEEEeeeeeecCC--ceEEEEEeccCCCCCCCCCCCceEEEEEeecc
Q 006078           83 NIIFTVKDDNPIG-ATLIGRAYVPVEEVLGG--EEVDKWVEILDEDRNPISSGSKIHVKLQYFDV  144 (662)
Q Consensus        83 ~L~~~V~D~d~~~-~~~IG~~~ipl~~l~~g--~~~~~w~~L~~~~~k~~k~~G~i~l~l~f~~~  144 (662)
                      .|.|+|||+|.++ +++||++.|||+++..+  ...+.|++|.        ..|+|+|+++|.+.
T Consensus        78 ~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~--------~~G~i~l~l~~~~~  134 (136)
T 1gmi_A           78 KIELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLE--------PEGKVYVIIDLSGS  134 (136)
T ss_dssp             EEEEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECB--------SSCEEEEEEEEEEE
T ss_pred             EEEEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcC--------CCeEEEEEEEEEec
Confidence            9999999999987 69999999999999864  3568999984        35899999999764


No 5  
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86  E-value=2.3e-21  Score=179.87  Aligned_cols=124  Identities=21%  Similarity=0.339  Sum_probs=107.1

Q ss_pred             eeEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECCeeeeeeeeecCCCCCCeeeeEEEEeccC----CC
Q 006078            6 LHGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEKARVGRTRMLKKEQSNPRWYESFHIYCAH----MA   81 (662)
Q Consensus         6 ~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~~~~kT~vi~~~t~nP~WNE~F~~~v~~----~~   81 (662)
                      ..|.|.|+|++|++|++.            +. |++||||+|++++++ .||+++++ +.||+|||+|.|.+..    ..
T Consensus         5 ~~g~L~v~v~~a~~L~~~------------~~-g~~dpyv~v~~~~~~-~kT~v~~~-t~nP~wne~f~f~v~~~~~~~~   69 (140)
T 2dmh_A            5 SSGMLRVIVESASNIPKT------------KF-GKPDPIVSVIFKDEK-KKTKKVDN-ELNPVWNEILEFDLRGIPLDFS   69 (140)
T ss_dssp             BCCEEEEEEEEEESCCCC------------SS-SCCCEEEEEECSSCE-EECCCCCS-CSSCEEEEEEEEECSSCCCCTT
T ss_pred             CCcEEEEEEEEeeCCCCC------------CC-CCCCeEEEEEECCEe-EEeeeecC-CCCCccCcEEEEEecccccCCC
Confidence            568999999999999973            44 789999999999875 69999998 9999999999999864    24


Q ss_pred             ceEEEEEEecCCCC-CceeEEEEeeeeeecCCceEEEEEe---ccCCCCCCCCCCCceEEEEEeecccc
Q 006078           82 SNIIFTVKDDNPIG-ATLIGRAYVPVEEVLGGEEVDKWVE---ILDEDRNPISSGSKIHVKLQYFDVTK  146 (662)
Q Consensus        82 ~~L~~~V~D~d~~~-~~~IG~~~ipl~~l~~g~~~~~w~~---L~~~~~k~~k~~G~i~l~l~f~~~~~  146 (662)
                      ..|.|+|||+|.++ +++||++.|+|.++..+...+.|++   |.+.+++.  ..|+|+|+++|.|...
T Consensus        70 ~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~--~~G~l~l~~~~~p~~~  136 (140)
T 2dmh_A           70 SSLGIIVKDFETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQD--TGATIDLVIGYDPPSG  136 (140)
T ss_dssp             CEEEEEEEETTCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCE--EEEEEEEEEEECCCBS
T ss_pred             CEEEEEEEECCCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCC--CCCEEEEEEEEECCCC
Confidence            78999999999987 6899999999999998888899988   76655542  4699999999988543


No 6  
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.86  E-value=1.3e-21  Score=180.77  Aligned_cols=125  Identities=18%  Similarity=0.281  Sum_probs=108.4

Q ss_pred             ceeEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECCeeeeeeeeec-CCCCCCeeeeEEEEeccCCCce
Q 006078            5 LLHGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEKARVGRTRMLK-KEQSNPRWYESFHIYCAHMASN   83 (662)
Q Consensus         5 ~~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~~~~kT~vi~-~~t~nP~WNE~F~~~v~~~~~~   83 (662)
                      ...|.|+|+|++|++|++.            +..|++||||+|++++++ .||++++ + +.||+|||+|.|++.+....
T Consensus         7 ~~~~~L~v~v~~a~~L~~~------------d~~g~~dpyv~v~~~~~~-~kT~~~~~~-~~nP~Wne~f~f~v~~~~~~   72 (136)
T 1wfj_A            7 GPHGTLEVVLVSAKGLEDA------------DFLNNMDPYVQLTCRTQD-QKSNVAEGM-GTTPEWNETFIFTVSEGTTE   72 (136)
T ss_dssp             CCEEEEEEEEEEEEECSSC------------CSSCSSCCCEEEESSSCE-EECCCCTTC-CSSCEEEEEEEEEEESSCCE
T ss_pred             CCcEEEEEEEEeccCCCCc------------ccCCCcCceEEEEECCcc-ceeEeccCC-CCCCccCcEEEEEECCCCCE
Confidence            4789999999999999984            445789999999998876 4999998 6 99999999999999876789


Q ss_pred             EEEEEEecCCCC-CceeEEEEeeeeee-cCCceEEEEEeccCCCCCCCCCCCceEEEEEeeccccc
Q 006078           84 IIFTVKDDNPIG-ATLIGRAYVPVEEV-LGGEEVDKWVEILDEDRNPISSGSKIHVKLQYFDVTKD  147 (662)
Q Consensus        84 L~~~V~D~d~~~-~~~IG~~~ipl~~l-~~g~~~~~w~~L~~~~~k~~k~~G~i~l~l~f~~~~~~  147 (662)
                      |.|+|||+|.++ +++||++.|+|.++ ..+...+.||+|. ++++   ..|+|+|+++|.|....
T Consensus        73 l~~~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~-~~~~---~~G~i~l~l~~~p~~~~  134 (136)
T 1wfj_A           73 LKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV-KDEE---YKGEIWVALSFKPSGPS  134 (136)
T ss_dssp             EEEEECCSSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE-ETTE---EEEEEEEEEEEEECCSC
T ss_pred             EEEEEEECCCCCCCceEEEEEEEHHHhccCCCCCcEEEEee-cCCc---cCEEEEEEEEEEeCCCC
Confidence            999999999987 69999999999999 4577778999997 3333   56999999999987654


No 7  
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.86  E-value=2e-21  Score=178.86  Aligned_cols=122  Identities=18%  Similarity=0.287  Sum_probs=106.0

Q ss_pred             ceeEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECCeeeeeeeeecCCCCCCeeeeEEEEeccCCCceE
Q 006078            5 LLHGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEKARVGRTRMLKKEQSNPRWYESFHIYCAHMASNI   84 (662)
Q Consensus         5 ~~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~~~~kT~vi~~~t~nP~WNE~F~~~v~~~~~~L   84 (662)
                      -..|.|.|+|++|++|++.            +..|++||||+|.+++++ .||+++++ ++||+|||+|.|++.+..+.|
T Consensus        10 ~~~~~L~v~v~~a~~L~~~------------d~~g~~dpyv~v~~~~~~-~kT~~~~~-t~nP~wne~f~f~~~~~~~~l   75 (133)
T 2ep6_A           10 KDVGILQVKVLKAADLLAA------------DFSGKSDPFCLLELGNDR-LQTHTVYK-NLNPEWNKVFTFPIKDIHDVL   75 (133)
T ss_dssp             CCSEEEEEEEEEEESCCCS------------SSSSCCCEEEEEEETTEE-EECCCCSS-CSSCCCCEEEEEEESCTTCEE
T ss_pred             CCceEEEEEEEeeECCCCC------------CCCCCcCeEEEEEECCEE-EEeeeecC-CCCCccccEEEEEecCCCCEE
Confidence            3569999999999999973            446789999999999875 49999999 999999999999998777899


Q ss_pred             EEEEEecCCCC-CceeEEEEeeeeeecCCceEEEEEeccCCCCCCCCCCCceEEEEEeec
Q 006078           85 IFTVKDDNPIG-ATLIGRAYVPVEEVLGGEEVDKWVEILDEDRNPISSGSKIHVKLQYFD  143 (662)
Q Consensus        85 ~~~V~D~d~~~-~~~IG~~~ipl~~l~~g~~~~~w~~L~~~~~k~~k~~G~i~l~l~f~~  143 (662)
                      .|+|||+|.++ +++||++.|+|.++..|.  ..|++|.+++++. +..|+|+|+++|..
T Consensus        76 ~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~-~~~G~i~l~i~~~~  132 (133)
T 2ep6_A           76 EVTVFDEDGDKPPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQ-AFKGVIYLEMDLIY  132 (133)
T ss_dssp             EEEEEEEETTEEEEECCBCEEEGGGCCSSC--CEECCCBCSCTTS-CCSSEEEEEEEEEE
T ss_pred             EEEEEECCCCCCCCeeEEEEEEHHHccCCC--ceEEEeecCCCCC-ccceEEEEEEEEEe
Confidence            99999999987 799999999999998765  4799998765543 36799999999854


No 8  
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.86  E-value=3.6e-21  Score=181.47  Aligned_cols=124  Identities=19%  Similarity=0.261  Sum_probs=100.8

Q ss_pred             eeEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECC-----eeeeeeeeecCCCCCCeeeeEEEEeccCC
Q 006078            6 LHGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEK-----ARVGRTRMLKKEQSNPRWYESFHIYCAHM   80 (662)
Q Consensus         6 ~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~-----~~~~kT~vi~~~t~nP~WNE~F~~~v~~~   80 (662)
                      ..|.|.|+|++|++|++.            +..|++||||+|++..     ....||+++++ ++||+|||+|.|.+...
T Consensus        18 ~~~~L~V~v~~a~~L~~~------------d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~   84 (153)
T 3b7y_A           18 NSRIVRVRVIAGIGLAKK------------DILGASDPYVRVTLYDPMNGVLTSVQTKTIKK-SLNPKWNEEILFRVHPQ   84 (153)
T ss_dssp             TCEEEEEEEEEEESCC-------------------CCEEEEEEEEETTTEEEEEEECCCCSS-CSSCCCCEEEEEEECTT
T ss_pred             CccEEEEEEEEeeCCCCC------------CCCCCCCcEEEEEEECCCCccceeeeCccccC-CCCCCCCCEEEEEecCC
Confidence            468999999999999973            4457899999999964     24569999999 99999999999999877


Q ss_pred             CceEEEEEEecCCCC-CceeEEEEeeeeeecCCce------EEEEEeccCCCCCCCCCCCceEEEEEeec
Q 006078           81 ASNIIFTVKDDNPIG-ATLIGRAYVPVEEVLGGEE------VDKWVEILDEDRNPISSGSKIHVKLQYFD  143 (662)
Q Consensus        81 ~~~L~~~V~D~d~~~-~~~IG~~~ipl~~l~~g~~------~~~w~~L~~~~~k~~k~~G~i~l~l~f~~  143 (662)
                      ...|.|+|||+|.++ +++||++.|+|.++..+..      ...||+|...+++. +..|+|+|+++|.|
T Consensus        85 ~~~l~~~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~-~~~G~i~l~l~~~P  153 (153)
T 3b7y_A           85 QHRLLFEVFDENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKS-RVKGYLRLKMTYLP  153 (153)
T ss_dssp             TCEEEEEEEECCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTC-CCCSEEEEEEEECC
T ss_pred             CCEEEEEEEECCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCC-CcceEEEEEEEEeC
Confidence            779999999999987 6999999999999986543      25899997654332 46799999999976


No 9  
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.85  E-value=1.9e-20  Score=175.51  Aligned_cols=121  Identities=21%  Similarity=0.410  Sum_probs=103.3

Q ss_pred             ceeEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECCeeeeeeeeecCCCCCCeeeeEEEEeccCCCceE
Q 006078            5 LLHGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEKARVGRTRMLKKEQSNPRWYESFHIYCAHMASNI   84 (662)
Q Consensus         5 ~~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~~~~kT~vi~~~t~nP~WNE~F~~~v~~~~~~L   84 (662)
                      ...|.|.|+|++|++|++.            +..|++||||+|.+++.+ .||+++++ ++||+|||+|.|.+....+.|
T Consensus        14 ~~~~~L~V~v~~a~~L~~~------------d~~g~~dpyv~v~~~~~~-~kT~~~~~-t~nP~Wne~f~f~v~~~~~~l   79 (148)
T 3kwu_A           14 KWSAKISITVVCAQGLQAK------------DKTGSSDPYVTVQVGKTK-KRTKTIYG-NLNPVWEENFHFECHNSSDRI   79 (148)
T ss_dssp             -CCEEEEEEEEEEESCCCC------------STTSCCCEEEEEEETTEE-EECCCCCS-CSSCEEEEEEEEEECSTTCEE
T ss_pred             ccccEEEEEEEeeeCCCCC------------CCCCCcCeEEEEEECCEE-EECCccCC-CCCCCcccEEEEEecCCCCEE
Confidence            4579999999999999974            456789999999998865 59999999 999999999999998777899


Q ss_pred             EEEEEecCCC-----------C-CceeEEEEeeeeeecCCceEEEEEeccCCCCCCCCCCCceEEEEEee
Q 006078           85 IFTVKDDNPI-----------G-ATLIGRAYVPVEEVLGGEEVDKWVEILDEDRNPISSGSKIHVKLQYF  142 (662)
Q Consensus        85 ~~~V~D~d~~-----------~-~~~IG~~~ipl~~l~~g~~~~~w~~L~~~~~k~~k~~G~i~l~l~f~  142 (662)
                      .|+|||+|..           + +++||++.|||.++  ....+.|++|....++. +..|+|+|+++|.
T Consensus        80 ~~~v~d~d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l--~~~~~~w~~L~~~~~~~-~~~G~i~l~l~~e  146 (148)
T 3kwu_A           80 KVRVLDEDDDIKSRVKQRFKRESDDFLGQTIIEVRTL--SGEMDVWYNLDKRTDKS-AVSGAIRLHISVE  146 (148)
T ss_dssp             EEEEEECCCSHHHHHHTTTSSCSSEEEEEEEEEGGGC--CSEEEEEEECBCSSTTC-CCCCEEEEEEEEE
T ss_pred             EEEEEECCCCccccccccccCCCCccEEEEEEEHHHC--cCCCCEEEEcccCCCCC-CCceEEEEEEEEE
Confidence            9999999985           4 79999999999998  45678999997544432 3579999999984


No 10 
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.85  E-value=5.2e-21  Score=174.11  Aligned_cols=121  Identities=17%  Similarity=0.225  Sum_probs=100.8

Q ss_pred             eEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECC--eeeeeeeeecCCCCCCeeeeEEEEeccC-CCce
Q 006078            7 HGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEK--ARVGRTRMLKKEQSNPRWYESFHIYCAH-MASN   83 (662)
Q Consensus         7 ~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~--~~~~kT~vi~~~t~nP~WNE~F~~~v~~-~~~~   83 (662)
                      +|.|.|+|++|++|++++..         +..|++||||+|++++  ....||+++++ ++||+|||+|.|.+.. ....
T Consensus         2 ~~~L~v~v~~a~~L~~~~~~---------d~~g~~dpyv~v~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~~~~   71 (126)
T 1rlw_A            2 SHKFTVVVLRATKVTKGAFG---------DMLDTPDPYVELFISTTPDSRKRTRHFNN-DINPVWNETFEFILDPNQENV   71 (126)
T ss_dssp             CEEEEEEEEEEESCCSCHHH---------HHHCCCCEEEEEECTTSTTCCEECCCCTT-CSSCEEEEEEEEEECTTSCCE
T ss_pred             CcEEEEEEEeeeCCCCCCcc---------ccCCCCCCEEEEEEccCCCceEEccccCC-CCCCcccceEEEEecCCCCCE
Confidence            58999999999999973100         2246799999999985  24569999999 9999999999999853 3578


Q ss_pred             EEEEEEecCCCCCceeEEEEeeeeeecCCceEEEEEeccCCCCCCCCCCCceEEEEEeec
Q 006078           84 IIFTVKDDNPIGATLIGRAYVPVEEVLGGEEVDKWVEILDEDRNPISSGSKIHVKLQYFD  143 (662)
Q Consensus        84 L~~~V~D~d~~~~~~IG~~~ipl~~l~~g~~~~~w~~L~~~~~k~~k~~G~i~l~l~f~~  143 (662)
                      |.|+|||+|.+++++||++.|+|+++..|...+.|++|.+      .+.|.|+|+++..|
T Consensus        72 l~i~V~d~d~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~------~~~g~i~~~le~~~  125 (126)
T 1rlw_A           72 LEITLMDANYVMDETLGTATFTVSSMKVGEKKEVPFIFNQ------VTEMVLEMSLEVAS  125 (126)
T ss_dssp             EEEEEEECCSSCCEEEEEEEEEGGGSCTTCEEEEEEEETT------TEEEEEEEEEECCC
T ss_pred             EEEEEEECCCCCCceeEEEEEEHHHccCCCcEEEEEEcCC------CceEEEEEEEEeCC
Confidence            9999999999889999999999999999999999999963      24577777776544


No 11 
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.84  E-value=2.7e-20  Score=179.95  Aligned_cols=125  Identities=19%  Similarity=0.273  Sum_probs=99.3

Q ss_pred             eeEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECCe-----eeeeeeeecCCCCCCeeeeEEEEeccCC
Q 006078            6 LHGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEKA-----RVGRTRMLKKEQSNPRWYESFHIYCAHM   80 (662)
Q Consensus         6 ~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~-----~~~kT~vi~~~t~nP~WNE~F~~~v~~~   80 (662)
                      ..|.|.|+|++|++|++.            +..|++||||+|++++.     ...||+++++ ++||+|||+|.|.+...
T Consensus         6 ~~g~L~V~v~~a~~L~~~------------d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~-t~nP~Wne~f~f~v~~~   72 (176)
T 3m7f_B            6 DTRVVRVKVIAGIGLAKK------------DILGASDPYVRVTLYDPMSGILTSVQTKTIKK-SLNPKWNEEILFRVLPQ   72 (176)
T ss_dssp             TCEEEEEEEEEEESCC---------------CCCCCCEEEEEEEEETTTEEEEEEECCCCSS-CSSCEEEEEEEEEECTT
T ss_pred             CcEEEEEEEEEeeCCCCc------------CCCCCcCcEEEEEEECCCCCcccceeCceECC-CCCCcccceEEEEEcCC
Confidence            368999999999999973            44678999999999641     3569999998 99999999999999866


Q ss_pred             CceEEEEEEecCCCC-CceeEEEEeeeeeecCCceE-E-----EEEeccCCCCCCCCCCCceEEEEEeecc
Q 006078           81 ASNIIFTVKDDNPIG-ATLIGRAYVPVEEVLGGEEV-D-----KWVEILDEDRNPISSGSKIHVKLQYFDV  144 (662)
Q Consensus        81 ~~~L~~~V~D~d~~~-~~~IG~~~ipl~~l~~g~~~-~-----~w~~L~~~~~k~~k~~G~i~l~l~f~~~  144 (662)
                      ...|.|+|||+|.++ +++||++.|+|.++..+... +     .||+|..+.++. +..|+|+|+++|.|.
T Consensus        73 ~~~L~~~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~-~~~G~l~l~l~~~p~  142 (176)
T 3m7f_B           73 RHRILFEVFDENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKS-RVKGYLRLKMTYLPK  142 (176)
T ss_dssp             TCEEEEEEEECC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTC-CCCSEEEEEEEECC-
T ss_pred             CCEEEEEEEECCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCC-ccCEEEEEEEEEEeC
Confidence            679999999999987 69999999999999866433 2     799997654432 367999999999997


No 12 
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.81  E-value=1.3e-19  Score=166.47  Aligned_cols=121  Identities=15%  Similarity=0.219  Sum_probs=98.4

Q ss_pred             eEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECC-eeeeeeeeecCCCCCCeeeeEEEEeccCCCceEE
Q 006078            7 HGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEK-ARVGRTRMLKKEQSNPRWYESFHIYCAHMASNII   85 (662)
Q Consensus         7 ~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~-~~~~kT~vi~~~t~nP~WNE~F~~~v~~~~~~L~   85 (662)
                      ...|+|+|++|++|+++            +..|++||||+|++++ ....||+++++ |+||+|||+|.|.+... +.|.
T Consensus         4 ~~~L~V~v~~a~~L~~~------------d~~g~sDpyv~v~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~-~~l~   69 (132)
T 3pyc_A            4 FIKIRLTVLCAKNLAKK------------DFFRLPDPFAKIVVDGSGQCHSTDTVKN-TLDPKWNQHYDLYVGKT-DSIT   69 (132)
T ss_dssp             EEEEEEEEEEEESCCCC------------STTCCCCEEEEEEETTTCCEEECCCCSS-CSSCEEEEEEEEEEETT-CCEE
T ss_pred             eEEEEEEEEEeECCCCC------------CCCCCcCeEEEEEECCCCceEECCccCC-CCCCCccCEEEEEeCCC-CEEE
Confidence            35799999999999974            4567899999999975 44579999998 99999999999998765 4599


Q ss_pred             EEEEecCCCC----CceeEEEEeeeeeec-CCceEEEEEeccCCCC-CCCCCCCceEEEEEe
Q 006078           86 FTVKDDNPIG----ATLIGRAYVPVEEVL-GGEEVDKWVEILDEDR-NPISSGSKIHVKLQY  141 (662)
Q Consensus        86 ~~V~D~d~~~----~~~IG~~~ipl~~l~-~g~~~~~w~~L~~~~~-k~~k~~G~i~l~l~f  141 (662)
                      |+|||+|.++    +++||++.||+.++. .+.....|++|....+ ++.+..|+|+|++++
T Consensus        70 ~~v~d~d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~  131 (132)
T 3pyc_A           70 ISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT  131 (132)
T ss_dssp             EEEEEGGGTTSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred             EEEEECCCCCCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence            9999999886    699999999999883 3333458899976532 233468999999875


No 13 
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.81  E-value=1.2e-19  Score=175.17  Aligned_cols=126  Identities=16%  Similarity=0.289  Sum_probs=102.8

Q ss_pred             cceeEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECCeeeeeeeeecCCCCCCeeeeEEEEeccCCCce
Q 006078            4 ILLHGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEKARVGRTRMLKKEQSNPRWYESFHIYCAHMASN   83 (662)
Q Consensus         4 ~~~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~~~~kT~vi~~~t~nP~WNE~F~~~v~~~~~~   83 (662)
                      ....+.|.|+|++|++|++.            +..+.+||||+|++++ ...||+++++ |+||+|||+|.|.+. ..+.
T Consensus        32 ~~~~~~L~V~V~~A~~L~~~------------~~~~~sDPYv~v~~~~-~~~kT~v~~~-tlnP~Wne~f~f~v~-~~~~   96 (173)
T 2nq3_A           32 LTMKSQLQITVISAKLKENK------------KNWFGPSPYVEVTVDG-QSKKTEKCNN-TNSPKWKQPLTVIVT-PVSK   96 (173)
T ss_dssp             CSCCEEEEEEEEEEEECCCC--------------CCCCCEEEEEEETT-EEEECCCCSS-CSSCEEEEEEEEEEC-TTCE
T ss_pred             cCCceEEEEEEEEeECCCCc------------ccCCCCCeEEEEEECC-EEeEccccCC-CCCCeECCEEEEEeC-CCCE
Confidence            34679999999999999942            1123489999999988 4569999998 999999999999986 4789


Q ss_pred             EEEEEEecCCCC-CceeEEEEeeeeeecCC-----ceEEEEEeccCCCCCCCCCCCceEEEEEeeccc
Q 006078           84 IIFTVKDDNPIG-ATLIGRAYVPVEEVLGG-----EEVDKWVEILDEDRNPISSGSKIHVKLQYFDVT  145 (662)
Q Consensus        84 L~~~V~D~d~~~-~~~IG~~~ipl~~l~~g-----~~~~~w~~L~~~~~k~~k~~G~i~l~l~f~~~~  145 (662)
                      |.|+|||+|.++ +++||++.|+|.++..+     +..+.|++|..+++. .+..|+|+|.+.|.+..
T Consensus        97 L~~~V~D~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~-~~~~G~L~v~l~~l~~~  163 (173)
T 2nq3_A           97 LHFRVWSHQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEP-TETIGDLSICLDGLQLE  163 (173)
T ss_dssp             EEEEEEECCSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCT-TSEEEEEEEEEESEECC
T ss_pred             EEEEEEECCCCCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCC-CcccEEEEEEEeeeecc
Confidence            999999999987 68999999999998742     224789999765332 24679999999998763


No 14 
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.79  E-value=6.4e-19  Score=162.65  Aligned_cols=104  Identities=17%  Similarity=0.318  Sum_probs=89.7

Q ss_pred             eeEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEEC----CeeeeeeeeecCCCCCCeeeeEEEEe-ccC-
Q 006078            6 LHGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLE----KARVGRTRMLKKEQSNPRWYESFHIY-CAH-   79 (662)
Q Consensus         6 ~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~----~~~~~kT~vi~~~t~nP~WNE~F~~~-v~~-   79 (662)
                      ..|.|.|+|++|++|+.             +..|++||||+|++.    +....||+++++ |+||+|||+|.|. +.. 
T Consensus        18 ~~~~L~V~V~~a~~L~~-------------~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wnE~f~f~~v~~~   83 (134)
T 2b3r_A           18 RNGTLFIMVMHIKDLVT-------------EDGADPNPYVKTYLLPDTHKTSKRKTKISRK-TRNPTFNEMLVYSGYSKE   83 (134)
T ss_dssp             ETTEEEEEEEEEECCCC-------------TTSCCCCEEEEEEEESCSSSCCCEECCCCCS-CSSCEEEEEEEEESCCHH
T ss_pred             cCCEEEEEEEEeeCCCC-------------CCCCCCCeEEEEEEEcCCCCCceecCCcCcC-CCCCCCccEEEECCcCHH
Confidence            56899999999999985             235779999999992    234569999999 9999999999998 653 


Q ss_pred             --CCceEEEEEEecCCCC-CceeEEEEeeeeeecCCceEEEEEeccC
Q 006078           80 --MASNIIFTVKDDNPIG-ATLIGRAYVPVEEVLGGEEVDKWVEILD  123 (662)
Q Consensus        80 --~~~~L~~~V~D~d~~~-~~~IG~~~ipl~~l~~g~~~~~w~~L~~  123 (662)
                        ....|.|+|||+|.++ +++||++.|+|.++..++..+.||+|.+
T Consensus        84 ~l~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~  130 (134)
T 2b3r_A           84 TLRQRELQLSVLSAESLRENFFLGGITLPLKDFNLSKETVKWYQLTA  130 (134)
T ss_dssp             HHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred             HhCcCEEEEEEEECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence              2368999999999987 6999999999999999889999999975


No 15 
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.77  E-value=1e-18  Score=164.57  Aligned_cols=105  Identities=23%  Similarity=0.316  Sum_probs=91.2

Q ss_pred             eeEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEEC--CeeeeeeeeecCCCCCCeeeeEEEEeccCC---
Q 006078            6 LHGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLE--KARVGRTRMLKKEQSNPRWYESFHIYCAHM---   80 (662)
Q Consensus         6 ~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~--~~~~~kT~vi~~~t~nP~WNE~F~~~v~~~---   80 (662)
                      ..+.|.|+|++|++|++.            +..|++||||+|++.  +....||+++++ +.||+|||+|.|.+...   
T Consensus        40 ~~~~L~V~v~~a~~L~~~------------d~~g~~dpyv~v~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~  106 (152)
T 1rsy_A           40 QNNQLLVGIIQAAELPAL------------DMGGTSDPYVKVFLLPDKKKKFETKVHRK-TLNPVFNEQFTFKVPYSELG  106 (152)
T ss_dssp             TTTEEEEEEEEEESCCCC------------STTSCCCEEEEEEEETTCCSCEECCCCTT-CSSCEEEEEEEECCCHHHHT
T ss_pred             CCCEEEEEEEEeECCCCc------------cCCCCcCeEEEEEEEcCCCceEeccccCC-CCCCcCcccEEEeecHHHcC
Confidence            347999999999999974            446789999999994  334569999999 99999999999988532   


Q ss_pred             CceEEEEEEecCCCC-CceeEEEEeeeeeecCCceEEEEEeccC
Q 006078           81 ASNIIFTVKDDNPIG-ATLIGRAYVPVEEVLGGEEVDKWVEILD  123 (662)
Q Consensus        81 ~~~L~~~V~D~d~~~-~~~IG~~~ipl~~l~~g~~~~~w~~L~~  123 (662)
                      ...|.|+|||+|.++ +++||++.|+|.++..|...+.|++|.+
T Consensus       107 ~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~  150 (152)
T 1rsy_A          107 GKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS  150 (152)
T ss_dssp             TCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred             CCEEEEEEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence            468999999999987 6999999999999998989999999965


No 16 
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.77  E-value=1e-18  Score=162.70  Aligned_cols=105  Identities=23%  Similarity=0.316  Sum_probs=90.5

Q ss_pred             eeEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEEC--CeeeeeeeeecCCCCCCeeeeEEEEeccCC---
Q 006078            6 LHGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLE--KARVGRTRMLKKEQSNPRWYESFHIYCAHM---   80 (662)
Q Consensus         6 ~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~--~~~~~kT~vi~~~t~nP~WNE~F~~~v~~~---   80 (662)
                      ..|.|.|+|++|++|++.            +..+++||||+|++.  +.+..||+++++ +.||+|||+|.|.+...   
T Consensus        32 ~~~~L~v~v~~a~~L~~~------------d~~g~~dpyv~v~l~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~   98 (143)
T 3f04_A           32 QNNQLLVGIIQAAELPAL------------DMGGTSDPYVKVFLLPDKKKKFETKVHRK-TLNPVFNEQFTFKVPYSELG   98 (143)
T ss_dssp             TTTEEEEEEEEEECCCCB------------GGGBCCCEEEEEEEESCCSCCEECCCCCS-CSSCEEEEEEEECCCHHHHT
T ss_pred             CCCEEEEEEEEecCCCCC------------CCCCCcCcEEEEEEECCCCccEECccCcC-CCCCcCcCeEEEeecHhhcC
Confidence            357899999999999973            345679999999992  334579999999 99999999999988532   


Q ss_pred             CceEEEEEEecCCCC-CceeEEEEeeeeeecCCceEEEEEeccC
Q 006078           81 ASNIIFTVKDDNPIG-ATLIGRAYVPVEEVLGGEEVDKWVEILD  123 (662)
Q Consensus        81 ~~~L~~~V~D~d~~~-~~~IG~~~ipl~~l~~g~~~~~w~~L~~  123 (662)
                      ...|.|+|||+|.++ +++||++.|+|.++..+...+.|++|..
T Consensus        99 ~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~  142 (143)
T 3f04_A           99 GKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS  142 (143)
T ss_dssp             TCEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred             CCEEEEEEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence            268999999999987 6999999999999999999999999963


No 17 
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.77  E-value=5.2e-19  Score=167.62  Aligned_cols=103  Identities=17%  Similarity=0.270  Sum_probs=89.0

Q ss_pred             eEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECC---e--eeeeeeeecCCCCCCeeeeEEEEeccCC-
Q 006078            7 HGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEK---A--RVGRTRMLKKEQSNPRWYESFHIYCAHM-   80 (662)
Q Consensus         7 ~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~---~--~~~kT~vi~~~t~nP~WNE~F~~~v~~~-   80 (662)
                      .|.|.|+|++|+||+++            +..|++||||+|++..   .  ...||+++++ |+||+|||+|.|.+... 
T Consensus        42 ~~~L~V~Vi~a~~L~~~------------d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~-tlnP~wnE~F~f~v~~~~  108 (155)
T 2z0u_A           42 NKQFAILIIQLSNLSAL------------LQQQDQKVNIRVAVLPCSESTTCLFRTRPLDA-SDTLVFNEVFWVSMSYPA  108 (155)
T ss_dssp             TTEEEEEEEEEECGGGT------------CCSCCSEEEEEEEEESCSCHHHHEEECCCEEC-CSSEEEEEEEEEECCHHH
T ss_pred             CCEEEEEEEEccCcCCc------------ccCCCCCEEEEEEEecCCCCCccceeCCcCCC-CCCCccccEEEEEcCHHH
Confidence            47899999999999974            4567899999999954   2  2569999999 99999999999998642 


Q ss_pred             --CceEEEEEEecCCCC-CceeEEEEeeeeeec-CCceEEEEEecc
Q 006078           81 --ASNIIFTVKDDNPIG-ATLIGRAYVPVEEVL-GGEEVDKWVEIL  122 (662)
Q Consensus        81 --~~~L~~~V~D~d~~~-~~~IG~~~ipl~~l~-~g~~~~~w~~L~  122 (662)
                        ...|.|+|||+|.++ +++||++.|+|+++. .++...+||+|+
T Consensus       109 l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~  154 (155)
T 2z0u_A          109 LHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL  154 (155)
T ss_dssp             HHHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred             hCcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence              358999999999987 599999999999996 477889999996


No 18 
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77  E-value=2e-18  Score=160.34  Aligned_cols=106  Identities=23%  Similarity=0.302  Sum_probs=91.0

Q ss_pred             eeEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEEC--CeeeeeeeeecCCCCCCeeeeEEEEeccC----
Q 006078            6 LHGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLE--KARVGRTRMLKKEQSNPRWYESFHIYCAH----   79 (662)
Q Consensus         6 ~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~--~~~~~kT~vi~~~t~nP~WNE~F~~~v~~----   79 (662)
                      ..+.|.|+|++|++|++.            +..|++||||+|++.  +....||+++++ +.||+|||+|.|.+..    
T Consensus        24 ~~~~L~v~v~~a~~L~~~------------d~~g~~dpyv~v~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~~~~~~~~   90 (141)
T 2d8k_A           24 QESTLTVKIMKAQELPAK------------DFSGTSDPFVKIYLLPDKKHKLETKVKRK-NLNPHWNETFLFEGFPYEKV   90 (141)
T ss_dssp             SSCCEEEEEEEEESCCCC------------SSSSCCCEEEEEEEESCCSSEEECCCCTT-CSSCCCCEEEEECSCCHHHH
T ss_pred             CCCEEEEEEEEeECCCCC------------CCCCCCCcEEEEEEECCCCccEeCceEcC-CCCCccccEEEECccCHHHc
Confidence            458899999999999973            446789999999994  334569999998 9999999999998522    


Q ss_pred             CCceEEEEEEecCCCC-CceeEEEEeeeeeecCCceEEEEEeccCC
Q 006078           80 MASNIIFTVKDDNPIG-ATLIGRAYVPVEEVLGGEEVDKWVEILDE  124 (662)
Q Consensus        80 ~~~~L~~~V~D~d~~~-~~~IG~~~ipl~~l~~g~~~~~w~~L~~~  124 (662)
                      ....|.|+|||+|.++ +++||++.|+|.++..+...+.|++|...
T Consensus        91 ~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~  136 (141)
T 2d8k_A           91 VQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPS  136 (141)
T ss_dssp             TTSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEEC
T ss_pred             ccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcCC
Confidence            2468999999999987 69999999999999988889999999754


No 19 
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.76  E-value=2.4e-18  Score=161.48  Aligned_cols=104  Identities=20%  Similarity=0.315  Sum_probs=90.1

Q ss_pred             eeEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECC----eeeeeeeeecCCCCCCeeeeEEEEeccCC-
Q 006078            6 LHGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEK----ARVGRTRMLKKEQSNPRWYESFHIYCAHM-   80 (662)
Q Consensus         6 ~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~----~~~~kT~vi~~~t~nP~WNE~F~~~v~~~-   80 (662)
                      ..|.|.|+|++|++|++.            +..|++||||+|++..    ....||+++++ ++||+|||+|.|.+... 
T Consensus        29 ~~~~L~v~v~~a~~L~~~------------d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~   95 (149)
T 1a25_A           29 DREVLIVVVRDAKNLVPM------------DPNGLSDPYVKLKLIPDPKSESKQKTKTIKC-SLNPEWNETFRFQLKESD   95 (149)
T ss_dssp             SSSEEEEEEEEEESCCCC------------STTSCCCEEEEEEEESCTTCSSCEECCCCSS-CSSCEEEEEEEEECCSGG
T ss_pred             cCCEEEEEEEEeeCCCCC------------CCCCCcCeEEEEEEECCCCCcceEecceeCC-CCCCcCCcEEEEEecccc
Confidence            468999999999999974            4467899999999963    34569999999 99999999999998653 


Q ss_pred             -CceEEEEEEecCCCC-CceeEEEEeeeeeecCCceEEEEEeccC
Q 006078           81 -ASNIIFTVKDDNPIG-ATLIGRAYVPVEEVLGGEEVDKWVEILD  123 (662)
Q Consensus        81 -~~~L~~~V~D~d~~~-~~~IG~~~ipl~~l~~g~~~~~w~~L~~  123 (662)
                       ...|.|+|||+|.++ +++||++.|+|.++..+ ..+.||+|.+
T Consensus        96 ~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~  139 (149)
T 1a25_A           96 KDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKA-GVDGWFKLLS  139 (149)
T ss_dssp             GGCEEEEEEEECCSSSCCEEEEEEEEEHHHHTTC-CEEEEEECBC
T ss_pred             CCCEEEEEEEECCCCCCCCEEEEEEEEHHHhCcC-ccCCeEEccC
Confidence             368999999999987 69999999999999876 4789999975


No 20 
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.76  E-value=1.5e-18  Score=166.91  Aligned_cols=106  Identities=20%  Similarity=0.264  Sum_probs=92.0

Q ss_pred             eeEEEEEEEEEeecCCCCCCCCccccccCCCC-CCCCCcEEEEEECCe----eeeeeeeecCCCCCCeeeeEEEEeccCC
Q 006078            6 LHGTLHVTIYEVDQLESGGGGNFFTKLLGGLG-KGGSELYATIDLEKA----RVGRTRMLKKEQSNPRWYESFHIYCAHM   80 (662)
Q Consensus         6 ~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~-~g~~DPYv~v~l~~~----~~~kT~vi~~~t~nP~WNE~F~~~v~~~   80 (662)
                      ..|.|.|+|++|++|+++            +. .|++||||+|++...    ...||+++++ |+||+|||+|.|.+...
T Consensus        28 ~~~~L~V~v~~a~~L~~~------------d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~   94 (171)
T 2q3x_A           28 KKGQLEVEVIRARSLTQK------------PGSKSTPAPYVKVYLLENGACIAKKKTRIARK-TLDPLYQQSLVFDESPQ   94 (171)
T ss_dssp             ETTEEEEEEEEEESCCCC------------C---CCCEEEEEEEEEETTEEEEEEECCCCCS-CSSCEEEEEEECSSCCT
T ss_pred             CCCEEEEEEEEeeCCCCC------------CcCCCCCCceEEEEEECCCccccceeCccCCC-CCCCCCCcEEEEEecCC
Confidence            468999999999999974            32 578999999999532    3569999999 99999999999999766


Q ss_pred             CceEEEEEE-ecCCCC-CceeEEEEeeeeeecCCceEEEEEeccCC
Q 006078           81 ASNIIFTVK-DDNPIG-ATLIGRAYVPVEEVLGGEEVDKWVEILDE  124 (662)
Q Consensus        81 ~~~L~~~V~-D~d~~~-~~~IG~~~ipl~~l~~g~~~~~w~~L~~~  124 (662)
                      ...|.|+|| |+|.++ +++||++.|+|+++..++..+.||+|...
T Consensus        95 ~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~  140 (171)
T 2q3x_A           95 GKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP  140 (171)
T ss_dssp             TEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred             CCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence            689999999 999987 69999999999999988889999999754


No 21 
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.76  E-value=5.8e-18  Score=175.58  Aligned_cols=126  Identities=21%  Similarity=0.297  Sum_probs=106.4

Q ss_pred             eeEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECC--eeeeeeeeecCCCCCCeeeeEEEEeccCC---
Q 006078            6 LHGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEK--ARVGRTRMLKKEQSNPRWYESFHIYCAHM---   80 (662)
Q Consensus         6 ~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~--~~~~kT~vi~~~t~nP~WNE~F~~~v~~~---   80 (662)
                      ..|.|.|+|++|++|+++            +..|++||||+|+++.  .+..||+++++ ++||+|||+|.|.+...   
T Consensus        17 ~~~~L~v~v~~a~~L~~~------------d~~~~~dpyv~v~~~~~~~~~~~T~~~~~-~~nP~wne~f~f~v~~~~~~   83 (284)
T 2r83_A           17 QNNQLLVGIIQAAELPAL------------DMGGTSDPYVKVFLLPDKKKKFETKVHRK-TLNPVFNEQFTFKVPYSELA   83 (284)
T ss_dssp             TTTEEEEEEEEEECCCCC------------SSSSSCCEEEEEEEETCTTSCEECCCCCS-CSSCEEEEEEEECCCGGGCT
T ss_pred             CCCEEEEEEEEeeCCCCC------------CCCCCCCeEEEEEEEcCCCceEeCCcccC-CCCCeeCceEEEEechHHhC
Confidence            458999999999999974            4567899999999953  33568999999 99999999999998642   


Q ss_pred             CceEEEEEEecCCCC-CceeEEEEeeeeeecCCceEEEEEeccCCCCCCCCCCCceEEEEEeecc
Q 006078           81 ASNIIFTVKDDNPIG-ATLIGRAYVPVEEVLGGEEVDKWVEILDEDRNPISSGSKIHVKLQYFDV  144 (662)
Q Consensus        81 ~~~L~~~V~D~d~~~-~~~IG~~~ipl~~l~~g~~~~~w~~L~~~~~k~~k~~G~i~l~l~f~~~  144 (662)
                      ...|.|+|+|.|.++ +++||++.|+|.++..++..+.|++|....+...+..|+|++.++|.|.
T Consensus        84 ~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p~  148 (284)
T 2r83_A           84 GKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVPT  148 (284)
T ss_dssp             TCEEEEEEEECCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEETT
T ss_pred             cCEEEEEEEECCCCCCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEecCc
Confidence            368999999999987 6999999999999998989999999986544322357999999999764


No 22 
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.76  E-value=5.1e-19  Score=164.42  Aligned_cols=106  Identities=18%  Similarity=0.308  Sum_probs=90.8

Q ss_pred             eeEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECCe-------------eeeeeeeecCCCCCCeeeeE
Q 006078            6 LHGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEKA-------------RVGRTRMLKKEQSNPRWYES   72 (662)
Q Consensus         6 ~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~-------------~~~kT~vi~~~t~nP~WNE~   72 (662)
                      ..|.|.|+|++|++|++.            +..|++||||+|++.+.             ...||+++++ |+||+|||+
T Consensus        16 ~~~~L~V~v~~a~~L~~~------------d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~-t~nP~wne~   82 (142)
T 1rh8_A           16 DLGNLIIHILQARNLVPR------------DNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQK-SLNPEWNQT   82 (142)
T ss_dssp             ETTEEEEEEEEEESCCCC------------SSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHH-HHSCEEEEE
T ss_pred             cCCEEEEEEEEecCCCCC------------CCCCCCCceEEEEEecCCCcccccccccccceeeccccCC-CCCCCCCCE
Confidence            468999999999999984            45678999999999753             2469999999 999999999


Q ss_pred             EEEe-ccC---CCceEEEEEEecCCCC-CceeEEEEeeeeeecCCceEEEEEeccCC
Q 006078           73 FHIY-CAH---MASNIIFTVKDDNPIG-ATLIGRAYVPVEEVLGGEEVDKWVEILDE  124 (662)
Q Consensus        73 F~~~-v~~---~~~~L~~~V~D~d~~~-~~~IG~~~ipl~~l~~g~~~~~w~~L~~~  124 (662)
                      |.|. +..   ....|.|+|||+|.++ +++||++.|+|.++..+...+.||+|.+.
T Consensus        83 f~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~  139 (142)
T 1rh8_A           83 VIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQ  139 (142)
T ss_dssp             EEECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCC
T ss_pred             EEECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCcc
Confidence            9997 432   2468999999999987 69999999999999877778899999754


No 23 
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.76  E-value=2.7e-18  Score=156.71  Aligned_cols=101  Identities=22%  Similarity=0.338  Sum_probs=82.5

Q ss_pred             eEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEEC----CeeeeeeeeecCCCCCCeeeeEEEEeccC---
Q 006078            7 HGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLE----KARVGRTRMLKKEQSNPRWYESFHIYCAH---   79 (662)
Q Consensus         7 ~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~----~~~~~kT~vi~~~t~nP~WNE~F~~~v~~---   79 (662)
                      .|.|.|+|++|++|++.            +..|++||||+|.+.    +....||+++++ +.||+|||+|.|.+.+   
T Consensus        17 ~~~L~v~v~~a~~L~~~------------d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~~~~~~~   83 (129)
T 2bwq_A           17 GHQLIVTILGAKDLPSR------------EDGRPRNPYVKIYFLPDRSDKNKRRTKTVKK-TLEPKWNQTFIYSPVHRRE   83 (129)
T ss_dssp             TTEEEEEEEEEESCCCC------------TTSCCBCEEEEEEEESSCSGGGEEECCCCSS-BSSCEEEEEEEECSCCGGG
T ss_pred             CCEEEEEEEEeeCCCCC------------CCCCCCCCEEEEEEecCCCCCcceecccccC-CCCCccccEEEEccCCHHH
Confidence            47899999999999974            456789999999992    234569999999 9999999999999532   


Q ss_pred             -CCceEEEEEEecCCCC---CceeEEEEeeeeeecCCceEEEEEec
Q 006078           80 -MASNIIFTVKDDNPIG---ATLIGRAYVPVEEVLGGEEVDKWVEI  121 (662)
Q Consensus        80 -~~~~L~~~V~D~d~~~---~~~IG~~~ipl~~l~~g~~~~~w~~L  121 (662)
                       ....|.|+|||+|.++   +++||++.|+|.++.... .+.||+|
T Consensus        84 ~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L  128 (129)
T 2bwq_A           84 FRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKL  128 (129)
T ss_dssp             GGGCEEEEEEEEC-------CEEEEEEEEEGGGCCCSS-CEEEEEC
T ss_pred             hcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCCCc-CCccEEC
Confidence             2368999999999987   799999999999987654 7899998


No 24 
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.76  E-value=2.2e-18  Score=162.62  Aligned_cols=106  Identities=24%  Similarity=0.319  Sum_probs=89.4

Q ss_pred             eeEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECC----eeeeeeeeecCCCCCCeeeeEEEEec--cC
Q 006078            6 LHGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEK----ARVGRTRMLKKEQSNPRWYESFHIYC--AH   79 (662)
Q Consensus         6 ~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~----~~~~kT~vi~~~t~nP~WNE~F~~~v--~~   79 (662)
                      ..|.|.|+|++|++|++.            + .|++||||+|.+..    ....||+++++ |.||+|||+|.|.+  .+
T Consensus        25 ~~~~L~V~v~~a~~L~~~------------d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~   90 (153)
T 3fbk_A           25 QDRVLLLHIIEGKGLISK------------Q-PGTCDPYVKISLIPEDSRLRHQKTQTVPD-CRDPAFHEHFFFPVQEED   90 (153)
T ss_dssp             SSSEEEEEEEEEESCCCC------------S-SSCCCEEEEEEEESCSCCTTCEECCCCTT-CSSCEEEEEEEEECCGGG
T ss_pred             CCCEEEEEEEEeeCCCCC------------C-CCCCCEEEEEEEEcCCCCccEEeccccCC-CCCCccccEEEEecccHH
Confidence            358899999999999973            3 47799999999932    23469999999 99999999999998  44


Q ss_pred             CCceEEEEEEecCCCC--CceeEEEEeeeeeecC-CceEEEEEeccCCC
Q 006078           80 MASNIIFTVKDDNPIG--ATLIGRAYVPVEEVLG-GEEVDKWVEILDED  125 (662)
Q Consensus        80 ~~~~L~~~V~D~d~~~--~~~IG~~~ipl~~l~~-g~~~~~w~~L~~~~  125 (662)
                      ....|.|+|||+|.++  +++||++.|+|.++.. +...+.|++|.+..
T Consensus        91 ~~~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~  139 (153)
T 3fbk_A           91 DQKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEH  139 (153)
T ss_dssp             TTSEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTT
T ss_pred             hCCEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChh
Confidence            4467999999999975  6899999999999984 78899999998643


No 25 
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*
Probab=99.76  E-value=6.8e-18  Score=193.41  Aligned_cols=203  Identities=16%  Similarity=0.170  Sum_probs=148.4

Q ss_pred             chHHHHHHHHHcCCc-----EEEEEEEeeeceeEEecCCCCCCCCCcchHHHHHHHHhhcCCeEEEEEecCccccccccc
Q 006078          203 RCWEDIFDAITNARH-----MIYITGWSVYTEISLVRDSRRPKPGGDIMLGELLKKKASEGVRVCMLVWDDRTSVSLLKK  277 (662)
Q Consensus       203 ~~~~~l~~aI~~Ak~-----~I~I~~w~~~p~~~L~r~~~~~~~~~~~~l~~lL~~kA~~GV~VrvLlwd~~~s~~~~~~  277 (662)
                      +.|+.+++.|++|++     +|+|+.|.+++               +..+.++|++||++||+|+||+ |..+.....  
T Consensus       347 ~sf~~v~~~I~~A~~dp~v~~I~it~Y~~~~---------------d~~I~~AL~~AA~rGV~VrVLv-d~~a~~~~~--  408 (687)
T 1xdp_A          347 HTFEHVLELLRQASFDPSVLAIKINIYRVAK---------------DSRIIDSMIHAAHNGKKVTVVV-ELQARFDEE--  408 (687)
T ss_dssp             BCTHHHHHHHHHHHHCTTEEEEEEEESSCCT---------------TCHHHHHHHHHHHTTCEEEEEE-CTTCSSTTT--
T ss_pred             hhhhhHHHHHHHHhhCCcceEEEEEeeeecC---------------cHHHHHHHHHHHhcCCEEEEEE-CCCcccchh--
Confidence            468899999999997     99999887642               3589999999999999999997 876622110  


Q ss_pred             cCccCCChHHHHhhhcCCCcEEEecCCCCCCCCCcccccccccccCCccceEEEcCCCCCCCcccccee---EEeccccC
Q 006078          278 DGLMATHDEETEKFFQGTDVHCILCPRNPDDGGSFIQDIQISAMFTHHQKIVVVDSPMPNGDPERRRIM---SFVGGIDL  354 (662)
Q Consensus       278 ~~~~~~~~~~~~~~l~~~~v~~~~~~r~p~~~~~~~~~~~~~~~~~hHqK~vVID~~~~~~~~~~~~~v---afvGG~nl  354 (662)
                            .+..+.+.|.++||+++.+.  |              .++.|+|++|||++..+      + +   +|+||.|+
T Consensus       409 ------~n~~~~~~L~~aGV~V~~~~--~--------------~~k~H~Ki~VID~re~~------~-i~~~a~iGS~N~  459 (687)
T 1xdp_A          409 ------ANIHWAKRLTEAGVHVIFSA--P--------------GLKIHAKLFLISRKENG------E-VVRYAHIGTGNF  459 (687)
T ss_dssp             ------TTTTTTHHHHHHTCEEEECC--T--------------TCEECCEEEEEEEEETT------E-EEEEEEEESSCS
T ss_pred             ------hHHHHHHHHHHCCCEEEEec--C--------------CccccceEEEEEeccCC------e-EEEEEEEeCCcC
Confidence                  01245667788999987653  1              25799999999952000      0 5   99999998


Q ss_pred             cCccccCCCCcccccCCCcCCCCCCCCCCCCCCcCCCCCCCCeeeeeeeeeCH-HHHHHHHHHHHHHHhhcCCccccccc
Q 006078          355 CDGRYDTPFHSLFRTLDTAHHDDFHQPNFPGASIEKGGPREPWHDIHSRLEGP-IAWDVLFNFEQRWRKQGGKDVLVHLR  433 (662)
Q Consensus       355 ~~~r~dt~~H~l~~~~~~~~~~d~~~~~~~~~~~~~~~pr~pWhDv~~~v~Gp-aa~dl~~~F~qrW~~~~~~~~l~~~~  433 (662)
                      ....+                                   ..|+|+++.+.|| +|.+++..|...|.......+     
T Consensus       460 d~rs~-----------------------------------~~n~D~~l~i~~~~i~~~l~~~F~~~~~~s~~~~~-----  499 (687)
T 1xdp_A          460 NEKTA-----------------------------------RLYTDYSLLTADARITNEVRRVFNFIENPYRPVTF-----  499 (687)
T ss_dssp             CTTGG-----------------------------------GTEEEEEEEECCHHHHHHHHHHHHHHHCTTSCCCC-----
T ss_pred             Ccchh-----------------------------------hhcceEEEEEeCHHHHHHHHHHHHHHHhhccccch-----
Confidence            76422                                   2589999999987 699999999999975422100     


Q ss_pred             ccCcccCCCCCCCCCCCCCCceeeEEeeccCCcCCCCCCChhHHhhcccccCCCCcchhHHHHHHHHHHHhccc----eE
Q 006078          434 ELGDIIIPPSPVMYPDDHDTWNVQLFRSIDGGAAFGFPETPEDAARAGLVSGKDNIIDRSIQDAYIHAIRRAKN----FI  509 (662)
Q Consensus       434 ~~~~~~~P~~~~~~~~~~~~~~vQv~rS~~~~s~~~~p~~~~~~~~~~l~~g~~~~~e~sI~~ay~~aI~~A~~----~I  509 (662)
                                    .        +++.+                        |. .....+...+...|+.|++    +|
T Consensus       500 --------------~--------~l~~s------------------------P~-~~~~~l~~~I~~ei~~A~~g~~~~I  532 (687)
T 1xdp_A          500 --------------D--------YLMVS------------------------PQ-NSRRLLYEMVDREIANAQQGLPSGI  532 (687)
T ss_dssp             --------------S--------SCEEE------------------------TT-SHHHHHHHHHHHHHHHHHTTCCCCE
T ss_pred             --------------h--------heeeC------------------------Cc-hhhHHHHHHHHHHHHHHHcCCCCEE
Confidence                          0        01111                        11 1234455566667788887    89


Q ss_pred             EEeeccccccccccccCCCCCccccccccchHHHHHHHHHHHhcCCceEEEEEe
Q 006078          510 YIENQYFLGSSFAWSADGIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVV  563 (662)
Q Consensus       510 YIEnqYFi~~~~~w~~~~~~~~~~~~~n~i~~~l~~~i~~A~~~g~~~~V~Iv~  563 (662)
                      +|..+| +++.                     .|..+|..|.++|  |+|.|++
T Consensus       533 ~i~~~~-lpD~---------------------~ii~AL~~Aa~rG--V~VrLiv  562 (687)
T 1xdp_A          533 TLKLNN-LVDK---------------------GLVDRLYAASSSG--VPVNLLV  562 (687)
T ss_dssp             EEEESC-BCCH---------------------HHHHHHHHHHHTT--CCEEEEE
T ss_pred             EEEeCC-CCCH---------------------HHHHHHHHHHHCC--CEEEEEE
Confidence            999887 5553                     7999999999999  9999999


No 26 
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.76  E-value=2.1e-18  Score=159.84  Aligned_cols=105  Identities=22%  Similarity=0.336  Sum_probs=88.3

Q ss_pred             eEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEEC----CeeeeeeeeecCCCCCCeeeeEEEEeccC---
Q 006078            7 HGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLE----KARVGRTRMLKKEQSNPRWYESFHIYCAH---   79 (662)
Q Consensus         7 ~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~----~~~~~kT~vi~~~t~nP~WNE~F~~~v~~---   79 (662)
                      .+.|.|+|++|++|+++            +..|++||||+|++.    +....||+++++ |+||+|||+|.|.+..   
T Consensus        20 ~~~L~v~v~~a~~L~~~------------d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~-t~nP~wne~f~f~~~~~~~   86 (141)
T 1v27_A           20 GHQLIVTILGAKDLPSR------------EDGRPRNPYVKIYFLPDRSDKNKRRTKTVKK-TLEPKWNQTFIYSPVHRRE   86 (141)
T ss_dssp             TTEEEEEEEEEESCCCC------------SSSCCCCEEEECCCSSCCSSSSCCBCCCCSS-CSSCCCCCCCEECSCCTTG
T ss_pred             CCEEEEEEEEccCCCCc------------CCCCCCCCEEEEEEecCCCCCcceeCccccC-CCCCccccEEEEccCCHHH
Confidence            47899999999999974            446789999999992    234569999999 9999999999998532   


Q ss_pred             -CCceEEEEEEecCCCC---CceeEEEEeeeeeecCCceEEEEEeccCCC
Q 006078           80 -MASNIIFTVKDDNPIG---ATLIGRAYVPVEEVLGGEEVDKWVEILDED  125 (662)
Q Consensus        80 -~~~~L~~~V~D~d~~~---~~~IG~~~ipl~~l~~g~~~~~w~~L~~~~  125 (662)
                       ....|.|+|||+|.++   +++||++.|+|.++.... .+.||+|.+.+
T Consensus        87 ~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~~  135 (141)
T 1v27_A           87 FRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQTHD  135 (141)
T ss_dssp             GGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCCS
T ss_pred             hcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC-CCceEECcccc
Confidence             1368999999999987   789999999999987654 78999998654


No 27 
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.76  E-value=1.2e-18  Score=163.44  Aligned_cols=109  Identities=18%  Similarity=0.229  Sum_probs=90.3

Q ss_pred             eEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECC----eeeeeeeeecCCCCCCeeeeEEEEeccCC--
Q 006078            7 HGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEK----ARVGRTRMLKKEQSNPRWYESFHIYCAHM--   80 (662)
Q Consensus         7 ~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~----~~~~kT~vi~~~t~nP~WNE~F~~~v~~~--   80 (662)
                      .|.|.|+|++|++|++.+           ...|++||||+|++..    ....||+++++ |+||+|||+|.|.+...  
T Consensus        22 ~~~L~V~v~~a~~L~~~d-----------~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~~   89 (148)
T 3fdw_A           22 TQSLVVHVKECHQLAYAD-----------EAKKRSNPYVKTYLLPDKSRQGKRKTSIKRD-TVNPLYDETLRYEIPESLL   89 (148)
T ss_dssp             TTEEEEEEEEEESCCCSB-----------TTTTBCCEEEEEEEETCCSGGGEEECCCCSS-CSSCEEEEEEEEECCSTTG
T ss_pred             CCEEEEEEEEecCCCCcc-----------cCCCCCCeEEEEEEEcCCcccCccccccCCC-CCCCcEeeEEEEEeChhHh
Confidence            478999999999999731           1357899999999952    22569999999 99999999999998653  


Q ss_pred             -CceEEEEEEecCCCC-CceeEEEEeeeeeecCCceEEEEEeccCCCCC
Q 006078           81 -ASNIIFTVKDDNPIG-ATLIGRAYVPVEEVLGGEEVDKWVEILDEDRN  127 (662)
Q Consensus        81 -~~~L~~~V~D~d~~~-~~~IG~~~ipl~~l~~g~~~~~w~~L~~~~~k  127 (662)
                       ...|.|+|||+|.++ +++||++.|||.++..++..+.|++|.++.+.
T Consensus        90 ~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~~~  138 (148)
T 3fdw_A           90 AQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKISA  138 (148)
T ss_dssp             GGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC---
T ss_pred             CceEEEEEEEECCCCcCCcEEEEEEEEcccccccCCccceEECcCcccc
Confidence             247999999999987 69999999999999877788899999865443


No 28 
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.75  E-value=2.7e-18  Score=158.30  Aligned_cols=105  Identities=21%  Similarity=0.346  Sum_probs=89.9

Q ss_pred             eeEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEEC----CeeeeeeeeecCCCCCCeeeeEEEEeccCC-
Q 006078            6 LHGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLE----KARVGRTRMLKKEQSNPRWYESFHIYCAHM-   80 (662)
Q Consensus         6 ~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~----~~~~~kT~vi~~~t~nP~WNE~F~~~v~~~-   80 (662)
                      ..|.|.|+|++|++|++.            +..|++||||+|.+.    +....||+++++ +.||+|||+|.|.+... 
T Consensus        14 ~~~~L~v~v~~a~~L~~~------------d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~-t~nP~wne~f~f~~~~~~   80 (137)
T 3rdl_A           14 TDEKLHVTVRDAKNLIPM------------DPNGLSDPYVKLKLIPDPKNESKQKTKTIRS-TLNPQWNESFTFKLKPSD   80 (137)
T ss_dssp             ETTEEEEEEEEEESCCCC------------STTSCCCEEEEEEEECCTTCCCCEECCCCCS-CSSCEEEEEEEEECCGGG
T ss_pred             cCCEEEEEEEEeeCCCCC------------CCCCCCCeeEEEEEEcCCCCCeeecCceEcC-CCCCCcccEEEEEcCchh
Confidence            568999999999999974            446789999999993    334569999999 99999999999998543 


Q ss_pred             -CceEEEEEEecCCCC-CceeEEEEeeeeeecCCceEEEEEeccCC
Q 006078           81 -ASNIIFTVKDDNPIG-ATLIGRAYVPVEEVLGGEEVDKWVEILDE  124 (662)
Q Consensus        81 -~~~L~~~V~D~d~~~-~~~IG~~~ipl~~l~~g~~~~~w~~L~~~  124 (662)
                       ...|.|+|||+|.++ +++||++.|+|+++..+. .+.||+|.+.
T Consensus        81 ~~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~  125 (137)
T 3rdl_A           81 KDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMP-ASGWYKLLNQ  125 (137)
T ss_dssp             GGCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHSC-EEEEEECBCH
T ss_pred             cCCEEEEEEEECCCCCCCceEEEEEEeHHHhccCc-cCceEECcCc
Confidence             357999999999987 699999999999998665 7899999754


No 29 
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.75  E-value=4.2e-18  Score=157.95  Aligned_cols=102  Identities=17%  Similarity=0.246  Sum_probs=87.1

Q ss_pred             eEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEE---CCeeeeeeeeecCCCCCCeeeeEEEEeccCC---
Q 006078            7 HGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDL---EKARVGRTRMLKKEQSNPRWYESFHIYCAHM---   80 (662)
Q Consensus         7 ~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l---~~~~~~kT~vi~~~t~nP~WNE~F~~~v~~~---   80 (662)
                      .+.|.|+|++|++.               +..|++||||+|++   ++....||+|+++ |+||+|||+|.|.+...   
T Consensus        25 ~~~L~V~v~~a~~~---------------d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~-tlnP~wnE~f~f~v~~~~l~   88 (138)
T 1wfm_A           25 KAELFVTRLEAVTS---------------NHDGGCDCYVQGSVANRTGSVEAQTALKKR-QLHTTWEEGLVLPLAEEELP   88 (138)
T ss_dssp             TTEEEEEEEEEECC---------------CCSSCCCEEEEEEEEETTEEEEEECCCCCC-CSSEECSSCEEEECCTTSST
T ss_pred             CCEEEEEEEEEEcC---------------CCCCCcceEEEEEEEcCCCcccEecccCcC-CCCCcCCceEEEEecHHHcC
Confidence            57899999999931               34678999999999   3444579999999 99999999999998643   


Q ss_pred             CceEEEEEEecCCCC-CceeEEEEeeeeeecCCceEEEEEeccCC
Q 006078           81 ASNIIFTVKDDNPIG-ATLIGRAYVPVEEVLGGEEVDKWVEILDE  124 (662)
Q Consensus        81 ~~~L~~~V~D~d~~~-~~~IG~~~ipl~~l~~g~~~~~w~~L~~~  124 (662)
                      ...|.|+|||+|.++ +++||++.|+|.++..+...+.|++|...
T Consensus        89 ~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~  133 (138)
T 1wfm_A           89 TATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTS  133 (138)
T ss_dssp             TCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCC
T ss_pred             CCEEEEEEEECCCCCCCcEEEEEEEEcccccCcccccceeeCcCC
Confidence            358999999999987 69999999999999877788999999754


No 30 
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75  E-value=2.7e-18  Score=159.65  Aligned_cols=105  Identities=19%  Similarity=0.257  Sum_probs=88.8

Q ss_pred             eEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECC--e--eeeeeeeecCCCCCCeeeeEEEEeccCC--
Q 006078            7 HGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEK--A--RVGRTRMLKKEQSNPRWYESFHIYCAHM--   80 (662)
Q Consensus         7 ~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~--~--~~~kT~vi~~~t~nP~WNE~F~~~v~~~--   80 (662)
                      .|.|.|+|++|++|+++            +..| +||||+|++..  .  ...||+++++ |+||+|||+|.|.+...  
T Consensus        23 ~~~L~v~v~~a~~L~~~------------d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l   88 (142)
T 2dmg_A           23 RNKLIVVVHACRNLIAF------------SEDG-SDPYVRMYLLPDKRRSGRRKTHVSKK-TLNPVFDQSFDFSVSLPEV   88 (142)
T ss_dssp             TTEEEEEEEEEECCCCS------------STTC-CCEEEEEEEESCCCSSSCEECCCCCS-CSSCEEEEEEEECCCHHHH
T ss_pred             CCEEEEEEEEeECCCCC------------CCCC-CCeeEEEEEEcCCCCCCcccCCccCC-CCCCCcCceEEEEecHHHh
Confidence            57899999999999974            4467 99999999932  2  3469999999 99999999999998532  


Q ss_pred             -CceEEEEEEecCCCC--C-ceeEEEEeeeeeecCCceEEEEEeccCCC
Q 006078           81 -ASNIIFTVKDDNPIG--A-TLIGRAYVPVEEVLGGEEVDKWVEILDED  125 (662)
Q Consensus        81 -~~~L~~~V~D~d~~~--~-~~IG~~~ipl~~l~~g~~~~~w~~L~~~~  125 (662)
                       ...|.|+|||+|.++  + ++||++.|+|.++..+...+.|++|.+..
T Consensus        89 ~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~  137 (142)
T 2dmg_A           89 QRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDS  137 (142)
T ss_dssp             HHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSC
T ss_pred             CcCEEEEEEEECCCccccCCcEEEEEEEecccccccccccceeeccCCC
Confidence             248999999999875  3 69999999999998877889999998653


No 31 
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.74  E-value=6.5e-18  Score=157.00  Aligned_cols=105  Identities=18%  Similarity=0.299  Sum_probs=90.0

Q ss_pred             eeEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECC----eeeeeeeeecCCCCCCeeeeEEEEe-ccCC
Q 006078            6 LHGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEK----ARVGRTRMLKKEQSNPRWYESFHIY-CAHM   80 (662)
Q Consensus         6 ~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~----~~~~kT~vi~~~t~nP~WNE~F~~~-v~~~   80 (662)
                      ..|.|.|+|++|++|++.            +..|++||||+|++.+    ....||+++++ +.||+|||+|.|. +...
T Consensus        27 ~~~~L~V~v~~a~~L~~~------------d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~~~~~~   93 (142)
T 2chd_A           27 DNSNLQCTIIRAKGLKPM------------DSNGLADPYVKLHLLPGASKSNKLRTKTLRN-TRNPVWNETLQYHGITEE   93 (142)
T ss_dssp             GGTEEEEEEEEEESCCCC------------CTTSCCCEEEEEEEESCCSGGGEEECCCCCS-CSSCEEEEEEEEESCCHH
T ss_pred             CCCEEEEEEEEecCCCCC------------CCCCCCCCEEEEEEEcCCCCcceeeCCcCCC-CCCCcCcCEEEEcccCHH
Confidence            457899999999999974            4467899999999964    34569999998 9999999999998 5321


Q ss_pred             ---CceEEEEEEecCCCC-CceeEEEEeeeeeecCCceEEEEEeccC
Q 006078           81 ---ASNIIFTVKDDNPIG-ATLIGRAYVPVEEVLGGEEVDKWVEILD  123 (662)
Q Consensus        81 ---~~~L~~~V~D~d~~~-~~~IG~~~ipl~~l~~g~~~~~w~~L~~  123 (662)
                         ...|.|+|||+|.++ +++||++.|+|.++..++..+.|++|..
T Consensus        94 ~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~  140 (142)
T 2chd_A           94 DMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLER  140 (142)
T ss_dssp             HHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred             HccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence               258999999999987 5899999999999999988899999853


No 32 
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.73  E-value=1.3e-17  Score=153.53  Aligned_cols=117  Identities=13%  Similarity=0.290  Sum_probs=82.3

Q ss_pred             eeEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECCeeeeeeeeecCCCCCCeeeeEEEEeccCCCceEE
Q 006078            6 LHGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEKARVGRTRMLKKEQSNPRWYESFHIYCAHMASNII   85 (662)
Q Consensus         6 ~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~~~~kT~vi~~~t~nP~WNE~F~~~v~~~~~~L~   85 (662)
                      ..|.|.|+|++|++|+.               .|++||||+|. .. . .||+++++++.||+|||+|.|.+.+....|.
T Consensus         3 ~~~~L~V~V~~A~~l~~---------------~g~~DPYv~v~-~~-~-~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~   64 (131)
T 2cjt_A            3 VMSLLCVGVKKAKFDGA---------------QEKFNTYVTLK-VQ-N-VKSTTIAVRGSQPSWEQDFMFEINRLDLGLT   64 (131)
T ss_dssp             CCEEEEEEEEEEECSSC---------------GGGCEEEEEEE-ET-T-EEEECCCEESSSCEEEEEEEEEECCCSSEEE
T ss_pred             cceEEEEEEEEeECCCC---------------CCCcCeEEEEE-ec-C-EEEeEecCCCCCceECCEEEEEEeCCCCeEE
Confidence            34899999999998853               35789999999 32 2 3666665339999999999999987777899


Q ss_pred             EEEEecCCCC-CceeEEEEeeeeeecCCc--eEEEEE----eccCCCCCCC----CCCCceEEEEEe
Q 006078           86 FTVKDDNPIG-ATLIGRAYVPVEEVLGGE--EVDKWV----EILDEDRNPI----SSGSKIHVKLQY  141 (662)
Q Consensus        86 ~~V~D~d~~~-~~~IG~~~ipl~~l~~g~--~~~~w~----~L~~~~~k~~----k~~G~i~l~l~f  141 (662)
                      |+|||+| ++ |++||++.|||+++....  ....|.    ++..++|+.+    ...+.+.+.++|
T Consensus        65 ~~V~D~d-~~~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~  130 (131)
T 2cjt_A           65 VEVWNKG-LIWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHF  130 (131)
T ss_dssp             EEEEECC-SSCEEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEE
T ss_pred             EEEEECC-CCCCCeEEEEEEEHHHhhhcCCCCccccEEcccccccCCCcCcceECCCccEEEEEEEe
Confidence            9999999 65 799999999999986432  112344    4433444321    234557777777


No 33 
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.73  E-value=1.7e-17  Score=152.94  Aligned_cols=106  Identities=25%  Similarity=0.359  Sum_probs=85.9

Q ss_pred             eEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECC----eeeeeeeeecCCCCCCeeeeEEEEeccCCC-
Q 006078            7 HGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEK----ARVGRTRMLKKEQSNPRWYESFHIYCAHMA-   81 (662)
Q Consensus         7 ~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~----~~~~kT~vi~~~t~nP~WNE~F~~~v~~~~-   81 (662)
                      .|.|.|+|++|++|++.            +..|++||||+|++.+    ....||+++++ +.||+|||+|.|.+.... 
T Consensus        15 ~~~L~v~v~~a~~L~~~------------d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~-t~nP~wne~f~f~v~~~~l   81 (138)
T 3n5a_A           15 ANSIIVNIIKARNLKAM------------DIGGTSDPYVKVWLMYKDKRVEKKKTVTKKR-NLNPIFNESFAFDIPTEKL   81 (138)
T ss_dssp             TTEEEEEEEEEESCCCC------------BTTTBCCEEEEEEEEETTEEEEEEECCCCSS-CSSCEEEEEEEEECCGGGG
T ss_pred             CCeEEEEEEEeeCCCCc------------CCCCCcCeEEEEEEEeCCCccceEeCccccC-CCCCcCcceEEEECChhhc
Confidence            47899999999999974            4467899999999963    23569999999 999999999999986543 


Q ss_pred             --ceEEEEEEecCCCC-CceeEEEEeeeeeecCCceEEEEEeccCCCCC
Q 006078           82 --SNIIFTVKDDNPIG-ATLIGRAYVPVEEVLGGEEVDKWVEILDEDRN  127 (662)
Q Consensus        82 --~~L~~~V~D~d~~~-~~~IG~~~ipl~~l~~g~~~~~w~~L~~~~~k  127 (662)
                        ..|.|+|+|+|.++ +++||++.|++.++.  ...++|++|+...++
T Consensus        82 ~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~--~~~~~W~~l~~~~~~  128 (138)
T 3n5a_A           82 RETTIIITVMDKDKLSRNDVIGKIYLSWKSGP--GEVKHWKDMIARPRQ  128 (138)
T ss_dssp             GGEEEEEEEEECCSSSCCEEEEEEEESSSSCH--HHHHHHHHHHHSTTC
T ss_pred             CceEEEEEEEECCCCCCCcEEEEEEEccccCC--hHHHHHHHHHhCCCC
Confidence              57999999999987 699999999998753  334567776654444


No 34 
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.72  E-value=2.5e-17  Score=157.44  Aligned_cols=90  Identities=22%  Similarity=0.238  Sum_probs=78.2

Q ss_pred             eEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECC----eeeeeeeeecCCCCCCeeeeEEEEeccCC--
Q 006078            7 HGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEK----ARVGRTRMLKKEQSNPRWYESFHIYCAHM--   80 (662)
Q Consensus         7 ~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~----~~~~kT~vi~~~t~nP~WNE~F~~~v~~~--   80 (662)
                      .|.|.|+|++|++|++.            +..|++||||+|++.+    ....||+++++ |+||+|||+|.|.+...  
T Consensus        36 ~~~L~V~v~~a~~L~~~------------d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l  102 (166)
T 2cm5_A           36 QGGLIVGIIRCVHLAAM------------DANGYSDPFVKLWLKPDMGKKAKHKTQIKKK-TLNPEFNEEFFYDIKHSDL  102 (166)
T ss_dssp             TTEEEEEEEEEESCCCC------------STTSCCCEEEEEEEETC---CCEEECCCCCS-CSSCEEEEEEEEECCGGGG
T ss_pred             CCEEEEEEEEeECCCCc------------cCCCCCCcEEEEEEECCCCccceEeCCcccC-CCCCcccceEEEEcchHhc
Confidence            57899999999999974            4467899999999965    24569999999 99999999999998642  


Q ss_pred             -CceEEEEEEecCCCC-CceeEEEEeeeeee
Q 006078           81 -ASNIIFTVKDDNPIG-ATLIGRAYVPVEEV  109 (662)
Q Consensus        81 -~~~L~~~V~D~d~~~-~~~IG~~~ipl~~l  109 (662)
                       ...|.|+|||+|.++ +++||++.|++.++
T Consensus       103 ~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~  133 (166)
T 2cm5_A          103 AKKSLDISVWDYDIGKSNDYIGGCQLGISAK  133 (166)
T ss_dssp             GGCEEEEEEEECCSSSCCEEEEEEEEETTCC
T ss_pred             CCCEEEEEEEECCCCCCCcEEEeEEEecccC
Confidence             358999999999987 69999999999875


No 35 
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.72  E-value=2.2e-17  Score=152.77  Aligned_cols=105  Identities=22%  Similarity=0.286  Sum_probs=87.0

Q ss_pred             eeEEEEEEEEEeecCCCCCCCCccccccCCCC-CCCCCcEEEEEEC--CeeeeeeeeecCCCCCCeeeeEEEEe-ccCC-
Q 006078            6 LHGTLHVTIYEVDQLESGGGGNFFTKLLGGLG-KGGSELYATIDLE--KARVGRTRMLKKEQSNPRWYESFHIY-CAHM-   80 (662)
Q Consensus         6 ~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~-~g~~DPYv~v~l~--~~~~~kT~vi~~~t~nP~WNE~F~~~-v~~~-   80 (662)
                      ..+.|.|+|++|++|+++            +. .|++||||+|++.  +....||+++++ ++||+|||+|.|. +... 
T Consensus        20 ~~~~L~v~v~~a~~L~~~------------d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~~v~~~~   86 (138)
T 1ugk_A           20 ERKAFVVNIKEARGLPAM------------DEQSMTSDPYIKMTILPEKKHKVKTRVLRK-TLDPAFDETFTFYGIPYTQ   86 (138)
T ss_dssp             GGTEEEEEEEEEESCCCC------------BTTTTBCEEEEEEEEETTTCSEEECCCCSS-CSSCEEEEEEEEECCCSTT
T ss_pred             CCCEEEEEEEEeeCCCCC------------CCCCCCCCCEEEEEEecCCCceEecCcCcC-CCCCcEeeEEEEcCcCHHH
Confidence            357899999999999974            33 3789999999995  234579999998 9999999999995 5432 


Q ss_pred             --CceEEEEEEecCCCC-CceeEEEEeeeeeecCCc-eEEEEEeccC
Q 006078           81 --ASNIIFTVKDDNPIG-ATLIGRAYVPVEEVLGGE-EVDKWVEILD  123 (662)
Q Consensus        81 --~~~L~~~V~D~d~~~-~~~IG~~~ipl~~l~~g~-~~~~w~~L~~  123 (662)
                        ...|.|+|||+|.++ +++||++.|+|.++..+. ....|++|..
T Consensus        87 ~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~  133 (138)
T 1ugk_A           87 IQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIIS  133 (138)
T ss_dssp             GGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBS
T ss_pred             hccCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhc
Confidence              358999999999987 689999999999998754 4567899964


No 36 
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.72  E-value=2.5e-17  Score=156.22  Aligned_cols=105  Identities=26%  Similarity=0.364  Sum_probs=86.9

Q ss_pred             eeEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECC--e--eeeeeeeecCCCCCCeeeeEEEEeccCC-
Q 006078            6 LHGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEK--A--RVGRTRMLKKEQSNPRWYESFHIYCAHM-   80 (662)
Q Consensus         6 ~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~--~--~~~kT~vi~~~t~nP~WNE~F~~~v~~~-   80 (662)
                      ..|.|.|+|++|+||++.            +..|++||||+|++..  .  ...||+++++ ++||+|||+|.|.+... 
T Consensus        23 ~~~~L~V~v~~a~~L~~~------------d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~   89 (159)
T 1tjx_A           23 TAGKLTVVILEAKNLKKM------------DVGGLSDPYVKIHLMQNGKRLKKKKTTIKKN-TLNPYYNESFSFEVPFEQ   89 (159)
T ss_dssp             TTTEEEEEEEEEESCCCC------------STTSCCCEEEEEEEEETTEEEEEEECCCCCS-CSSCEEEEEEEEECCGGG
T ss_pred             CCCEEEEEEEEeeCCCCc------------cCCCCCCeEEEEEEEeCCceeceeeCceecC-CCCCcccceEEEEcCHHH
Confidence            357999999999999974            4467899999999952  1  3569999999 99999999999998643 


Q ss_pred             --CceEEEEEEecCCCC-CceeEEEEeeeeee------------cCCceEEEEEeccC
Q 006078           81 --ASNIIFTVKDDNPIG-ATLIGRAYVPVEEV------------LGGEEVDKWVEILD  123 (662)
Q Consensus        81 --~~~L~~~V~D~d~~~-~~~IG~~~ipl~~l------------~~g~~~~~w~~L~~  123 (662)
                        ...|.|+|||+|.++ +++||++.|++..+            ..+..++.|++|..
T Consensus        90 l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~  147 (159)
T 1tjx_A           90 IQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV  147 (159)
T ss_dssp             GGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBC
T ss_pred             hCCcEEEEEEEECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcC
Confidence              257999999999987 69999999999854            23567788888864


No 37 
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.72  E-value=2.3e-17  Score=151.21  Aligned_cols=118  Identities=15%  Similarity=0.220  Sum_probs=103.9

Q ss_pred             EEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECCeeeeeeeeecCCCCCCeeeeEEEEeccCC---CceE
Q 006078            8 GTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEKARVGRTRMLKKEQSNPRWYESFHIYCAHM---ASNI   84 (662)
Q Consensus         8 G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~~~~kT~vi~~~t~nP~WNE~F~~~v~~~---~~~L   84 (662)
                      =.|+|+|.+|++|+.                 ++||||+|.+.+.+ .||+++++++.||+|||+|.|++..+   .+.|
T Consensus        21 msL~V~l~~a~~Lpg-----------------~~Dp~akv~FRg~k-~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L   82 (144)
T 3l9b_A           21 MALIVHLKTVSELRG-----------------RADRIAKVTFRGQS-FYSRVLENCEDVADFDETFRWPVASSIDRNEVL   82 (144)
T ss_dssp             EEEEEEEEEEESCCS-----------------CEEEEEEEEETTEE-EECCCEEEECSCEEEEEEEEEEESSCCCTTCEE
T ss_pred             EEEEEEEEEecCCCC-----------------CCCCeEEEEEeccc-eeeEEeccCCCCceEcceEEecCCCCCCCCCEE
Confidence            369999999999984                 48999999998765 49999984499999999999998643   4789


Q ss_pred             EEEEEecCCCC-CceeEEEEeeeeeecCCceEEEEEeccCCCCCCCCCCCceEEEEEeeccc
Q 006078           85 IFTVKDDNPIG-ATLIGRAYVPVEEVLGGEEVDKWVEILDEDRNPISSGSKIHVKLQYFDVT  145 (662)
Q Consensus        85 ~~~V~D~d~~~-~~~IG~~~ipl~~l~~g~~~~~w~~L~~~~~k~~k~~G~i~l~l~f~~~~  145 (662)
                      .|.|+|+++++ +++||++.++|.++..++....+.+|.+.++++.  .+.|.++++|.|..
T Consensus        83 ~v~V~d~~~v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~--~a~I~l~l~Y~pp~  142 (144)
T 3l9b_A           83 EIQIFNYSKVFSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAII--KTSLSMEVRYQAAD  142 (144)
T ss_dssp             EEEEEEECTTSCCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEE--EEEEEEEEEEEETT
T ss_pred             EEEEEECccccCCCEEEEEEEEhHHhccCCeEEEeecccCCCCCcc--ccEEEEEEEecCCC
Confidence            99999999987 6999999999999998888888999999998874  48999999998854


No 38 
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.72  E-value=5.6e-18  Score=159.56  Aligned_cols=106  Identities=25%  Similarity=0.310  Sum_probs=83.1

Q ss_pred             eEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEE--CCee--eeeeeeecCCCCCCeeeeEEEEeccCC--
Q 006078            7 HGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDL--EKAR--VGRTRMLKKEQSNPRWYESFHIYCAHM--   80 (662)
Q Consensus         7 ~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l--~~~~--~~kT~vi~~~t~nP~WNE~F~~~v~~~--   80 (662)
                      .|.|.|+|++|++|++.            +..|++||||+|++  ++.+  ..||+++++ ++||+|||+|.|.+...  
T Consensus        29 ~~~L~v~v~~a~~L~~~------------d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l   95 (153)
T 1w15_A           29 TNTLTVVVLKARHLPKS------------DVSGLSDPYVKVNLYHAKKRISKKKTHVKKC-TPNAVFNELFVFDIPCESL   95 (153)
T ss_dssp             TTEEEEEEEEEESCC------------------CCCEEEEEEEEETTEEEEEEECCCCCS-CSSEEEEEEEEEECCSSSS
T ss_pred             CCEEEEEEEEeECCCCc------------CCCCCCCeEEEEEEEeCCeEeceEecCcccC-CCCCeecceEEEECCHHHh
Confidence            57899999999999973            44677999999999  4443  459999999 99999999999998654  


Q ss_pred             -CceEEEEEEecCCCC-CceeEEEEeeeeeecCCceEEEEEeccCCCCC
Q 006078           81 -ASNIIFTVKDDNPIG-ATLIGRAYVPVEEVLGGEEVDKWVEILDEDRN  127 (662)
Q Consensus        81 -~~~L~~~V~D~d~~~-~~~IG~~~ipl~~l~~g~~~~~w~~L~~~~~k  127 (662)
                       ...|.|+|||+|.++ +++||++.|++++  .+...+.|++|+...++
T Consensus        96 ~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~--~~~~~~~W~~l~~~p~~  142 (153)
T 1w15_A           96 EEISVEFLVLDSERGSRNEVIGRLVLGATA--EGSGGGHWKEICDFPRR  142 (153)
T ss_dssp             TTEEEEEEEEECCTTSCCEEEEEEEESTTC--CSHHHHHHHHHHHSTTC
T ss_pred             CceEEEEEEEeCCCCCCCcEEEEEEECCCC--CchHHHHHHHHHhCCCC
Confidence             268999999999987 6999999999987  34455667777654333


No 39 
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.71  E-value=1e-17  Score=156.70  Aligned_cols=110  Identities=21%  Similarity=0.256  Sum_probs=88.8

Q ss_pred             eEEEEEEEEEeecCCCC-CCCCccccccCCCCCCCCCcEEEEEECC--eeeeeeeeecCCCCCCeeeeEEEEeccCC---
Q 006078            7 HGTLHVTIYEVDQLESG-GGGNFFTKLLGGLGKGGSELYATIDLEK--ARVGRTRMLKKEQSNPRWYESFHIYCAHM---   80 (662)
Q Consensus         7 ~G~L~V~I~eA~~L~~~-~~~~~~~~~~~~~~~g~~DPYv~v~l~~--~~~~kT~vi~~~t~nP~WNE~F~~~v~~~---   80 (662)
                      .|.|.|+|++|++|++. +.. -+     .+..|++||||+|++..  ....||+++++ ++||+|||+|.|.+...   
T Consensus        25 ~~~L~V~v~~a~~L~~~~d~~-g~-----~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~   97 (147)
T 2enp_A           25 HNHLTVRVIEARDLPPPISHD-GS-----RQDMAHSNPYVKICLLPDQKNSKQTGVKRK-TQKPVFEERYTFEIPFLEAQ   97 (147)
T ss_dssp             TTEEEEEEEEEECCCCSCSSC-CS-----SCTTCCCCCEEEEEEETCCSSCEECCCCCS-CSSCCCCBCCEECCCHHHHH
T ss_pred             CCEEEEEEEEEeCCCCccccc-cc-----cccCCCCCcEEEEEEEeCCCcceEeecccC-CCCCeEeeeEEEEeChHHhc
Confidence            57999999999999972 110 00     01235799999999952  34569999998 99999999999998642   


Q ss_pred             CceEEEEEEecCCCC-CceeEEEEeeeeeecCCceEEEEEeccC
Q 006078           81 ASNIIFTVKDDNPIG-ATLIGRAYVPVEEVLGGEEVDKWVEILD  123 (662)
Q Consensus        81 ~~~L~~~V~D~d~~~-~~~IG~~~ipl~~l~~g~~~~~w~~L~~  123 (662)
                      ...|.|+|||+|.++ +++||++.|+|.++..++..+.|++|..
T Consensus        98 ~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~  141 (147)
T 2enp_A           98 RRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIP  141 (147)
T ss_dssp             HSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBC
T ss_pred             cCEEEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeec
Confidence            258999999999987 6899999999999987777788999974


No 40 
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=99.71  E-value=3.6e-17  Score=186.24  Aligned_cols=207  Identities=14%  Similarity=0.191  Sum_probs=146.0

Q ss_pred             cchHHHHHHHHHcCCc-----EEEEEEEeeeceeEEecCCCCCCCCCcchHHHHHHHHhhcCCeEEEEEecCcccccccc
Q 006078          202 HRCWEDIFDAITNARH-----MIYITGWSVYTEISLVRDSRRPKPGGDIMLGELLKKKASEGVRVCMLVWDDRTSVSLLK  276 (662)
Q Consensus       202 ~~~~~~l~~aI~~Ak~-----~I~I~~w~~~p~~~L~r~~~~~~~~~~~~l~~lL~~kA~~GV~VrvLlwd~~~s~~~~~  276 (662)
                      .+.|+.++++|++|++     +|.++.|++.               .+..+.++|.+||++||+|+||+ | .++.... 
T Consensus       351 ~~sf~~vi~~I~~A~~DP~V~sIk~tlYr~~---------------~ds~Iv~ALi~AA~rGv~V~vLv-e-l~arfde-  412 (705)
T 2o8r_A          351 YYTYDYVVRLLMEAAISPDVSEIRLTQYRVA---------------ENSSIISALEAAAQSGKKVSVFV-E-LKARFDE-  412 (705)
T ss_dssp             TBCSHHHHHHHHHHHTCTTEEEEEEEESCCC---------------SCCHHHHHHHHHHHTTCEEEEEE-C-CCSCC---
T ss_pred             hHhHHHHHHHHHHhccCCCceEEEEEEEEEc---------------CCHHHHHHHHHHHHCCCEEEEEE-e-CCCCcch-
Confidence            4568999999999999     9999999874               23589999999999999999997 8 5553211 


Q ss_pred             ccCccCCChHHHHhhhcCCCcEEEecCCCCCCCCCcccccccccccCCccceEEEcCC--CCCCCccccceeEEeccccC
Q 006078          277 KDGLMATHDEETEKFFQGTDVHCILCPRNPDDGGSFIQDIQISAMFTHHQKIVVVDSP--MPNGDPERRRIMSFVGGIDL  354 (662)
Q Consensus       277 ~~~~~~~~~~~~~~~l~~~~v~~~~~~r~p~~~~~~~~~~~~~~~~~hHqK~vVID~~--~~~~~~~~~~~vafvGG~nl  354 (662)
                            ..+..+.+.|+++||+|+...                .++++|+|++|||++  ..+|   -++ .+++|    
T Consensus       413 ------e~ni~wa~~Le~aGv~Vv~g~----------------~~lk~H~Ki~lIdrr~~~~g~---~~~-y~~ig----  462 (705)
T 2o8r_A          413 ------ENNLRLSERMRRSGIRIVYSM----------------PGLKVHAKTALILYHTPAGER---PQG-IALLS----  462 (705)
T ss_dssp             --------CHHHHHHHHHHTCEEEECC----------------TTCCBCCCEEEEEECCCSSSC---CCE-EEEEE----
T ss_pred             ------hhhHHHHHHHHHCCCEEEEcc----------------CCCCceeEEEEEecccccCCc---eeE-EEecc----
Confidence                  112477889999999987531                247999999999986  2111   011 12221    


Q ss_pred             cCccccCCCCcccccCCCcCCCCCCCCCCCCCCcCCCCCCCCeeeeeeeeeCH-HHHHHHHHHHHHHHhhcCCccccccc
Q 006078          355 CDGRYDTPFHSLFRTLDTAHHDDFHQPNFPGASIEKGGPREPWHDIHSRLEGP-IAWDVLFNFEQRWRKQGGKDVLVHLR  433 (662)
Q Consensus       355 ~~~r~dt~~H~l~~~~~~~~~~d~~~~~~~~~~~~~~~pr~pWhDv~~~v~Gp-aa~dl~~~F~qrW~~~~~~~~l~~~~  433 (662)
                       .|.|..                             .. ..-|.|+++...+| ++.|++..|...|....         
T Consensus       463 -tGN~n~-----------------------------~t-ariy~D~~l~t~~~~i~~dl~~vF~~~tg~~~---------  502 (705)
T 2o8r_A          463 -TGNFNE-----------------------------TT-ARIYSDTTLMTANTDIVHDVYRLFRILDGDPE---------  502 (705)
T ss_dssp             -SSCSSC-----------------------------CC-SSCEEEEEEEECCHHHHHHHHHHHHHHTTCCC---------
T ss_pred             -ccceee-----------------------------eE-EEEEeeeeeeecChHHHHHHHHHHHHHhCCCC---------
Confidence             122210                             00 12367777777775 67999999966553110         


Q ss_pred             ccCcccCCCCCCCCCCCCCCceeeEEeeccCCcCCCCCCChhHHhhcccccCCCCcchhHHHHHHHHHHHhccc----eE
Q 006078          434 ELGDIIIPPSPVMYPDDHDTWNVQLFRSIDGGAAFGFPETPEDAARAGLVSGKDNIIDRSIQDAYIHAIRRAKN----FI  509 (662)
Q Consensus       434 ~~~~~~~P~~~~~~~~~~~~~~vQv~rS~~~~s~~~~p~~~~~~~~~~l~~g~~~~~e~sI~~ay~~aI~~A~~----~I  509 (662)
                                    +  . .. .|++-                        ||.. ....|.+.+..+|.+|++    +|
T Consensus       503 --------------~--~-~~-~~l~~------------------------sP~~-~~~~i~~~i~~eI~~Ak~G~~a~I  539 (705)
T 2o8r_A          503 --------------P--A-RF-SRLLV------------------------ARYN-MGEAITNLIEREIENVKRGKRGYM  539 (705)
T ss_dssp             --------------C--S-CC-SSCEE------------------------TTTT-HHHHHHHHHHHHHHHHHTTCCCEE
T ss_pred             --------------C--C-Cc-eEEEE------------------------CCch-HHHHHHHHHHHHHHHHhcCCCCEE
Confidence                          0  0 01 23332                        2222 357899999999999999    99


Q ss_pred             EEeeccccccccccccCCCCCccccccccchHHHHHHHHHHHhcCCceEEEEEe
Q 006078          510 YIENQYFLGSSFAWSADGIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVV  563 (662)
Q Consensus       510 YIEnqYFi~~~~~w~~~~~~~~~~~~~n~i~~~l~~~i~~A~~~g~~~~V~Iv~  563 (662)
                      +|.++| +++.                     +|..+|..|.++|  |+|.+++
T Consensus       540 ~ik~n~-l~D~---------------------~ii~aL~~As~~G--V~V~LIV  569 (705)
T 2o8r_A          540 LLKMNG-LQDK---------------------NVITQLYRASEAG--VEIDLIV  569 (705)
T ss_dssp             EEEESC-BCCH---------------------HHHHHHHHHHHTT--CEEEEEE
T ss_pred             EEEcCC-CCCH---------------------HHHHHHHHHHHCC--CeEEEEE
Confidence            999998 7664                     7999999999999  9999999


No 41 
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=99.70  E-value=6.4e-17  Score=159.16  Aligned_cols=134  Identities=15%  Similarity=0.202  Sum_probs=102.0

Q ss_pred             chHHHHHHHHHcCCcEEEEEEEeeeceeEEecCCCCCCCCCcchHHHHHHHHhhcCCeEEEEEecCccccccccccCccC
Q 006078          203 RCWEDIFDAITNARHMIYITGWSVYTEISLVRDSRRPKPGGDIMLGELLKKKASEGVRVCMLVWDDRTSVSLLKKDGLMA  282 (662)
Q Consensus       203 ~~~~~l~~aI~~Ak~~I~I~~w~~~p~~~L~r~~~~~~~~~~~~l~~lL~~kA~~GV~VrvLlwd~~~s~~~~~~~~~~~  282 (662)
                      ..|+.|+++|++||++|+|+.|+|.                ...|.++|.+||+|||+||||+ |..... .        
T Consensus        46 ~~~~~ll~~I~~A~~sI~i~~y~~~----------------~~~i~~aL~~aa~rGV~Vrii~-D~~~~~-~--------   99 (196)
T 4ggj_A           46 SSLSRLLRALLAARSSLELCLFAFS----------------SPQLGRAVQLLHQRGVRVRVIT-DCDYMA-L--------   99 (196)
T ss_dssp             CHHHHHHHHHHTCSSEEEEEESCBC----------------CHHHHHHHHHHHHTTCEEEEEE-SSCCC-----------
T ss_pred             HHHHHHHHHHHHhheEEEEEEEEeC----------------CHHHHHHHHHHHHcCCcEEEEE-eccccc-c--------
Confidence            5689999999999999999999873                2479999999999999999997 863221 1        


Q ss_pred             CChHHHHhhhcCCCcEEEecCCCCCCCCCcccccccccccCCccceEEEcCCCCCCCccccceeEEeccccCcCccccCC
Q 006078          283 THDEETEKFFQGTDVHCILCPRNPDDGGSFIQDIQISAMFTHHQKIVVVDSPMPNGDPERRRIMSFVGGIDLCDGRYDTP  362 (662)
Q Consensus       283 ~~~~~~~~~l~~~~v~~~~~~r~p~~~~~~~~~~~~~~~~~hHqK~vVID~~~~~~~~~~~~~vafvGG~nl~~~r~dt~  362 (662)
                        .......|..+||++..+..                ....|+|++|||++           ++|+||.|++...+.  
T Consensus       100 --~~~~~~~l~~~gi~v~~~~~----------------~~~~H~K~~viD~~-----------~~~~GS~N~t~~~~~--  148 (196)
T 4ggj_A          100 --NGSQIGLLRKAGIQVRHDQD----------------LGYMHHKFAIVDKK-----------VLITGSLNWTTQAIQ--  148 (196)
T ss_dssp             ---CCHHHHHHHTTCEEEECCS----------------SSCCCCEEEEETTT-----------EEEEESCCBCHHHHH--
T ss_pred             --cHHHHHHHHhcCCCcccccc----------------cccccCcEEEEcce-----------EEEecCccCChhhhc--
Confidence              11345677889999875431                24679999999999           999999999875442  


Q ss_pred             CCcccccCCCcCCCCCCCCCCCCCCcCCCCCCCCeeeeeeeeeCHHHHHHHHHHHHHHHhhcC
Q 006078          363 FHSLFRTLDTAHHDDFHQPNFPGASIEKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGG  425 (662)
Q Consensus       363 ~H~l~~~~~~~~~~d~~~~~~~~~~~~~~~pr~pWhDv~~~v~Gpaa~dl~~~F~qrW~~~~~  425 (662)
                                                      .-|-++.+.-.+++|..++..|.+.|+....
T Consensus       149 --------------------------------~n~E~~~~i~~~~~~~~~~~~F~~~W~~~~p  179 (196)
T 4ggj_A          149 --------------------------------NNRENVLIMEDTEYVRLFLEEFERIWEEFDP  179 (196)
T ss_dssp             --------------------------------HCCEEEEEECCHHHHHHHHHHHHHHHHHTCC
T ss_pred             --------------------------------ccceeEEEEECHHHHHHHHHHHHHHHHhCCC
Confidence                                            1122334434456899999999999997644


No 42 
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.67  E-value=1.3e-16  Score=153.01  Aligned_cols=118  Identities=13%  Similarity=0.190  Sum_probs=87.6

Q ss_pred             eEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECCeeeeeeeeecCCCCCCeeeeEEEEeccCCCceEEE
Q 006078            7 HGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEKARVGRTRMLKKEQSNPRWYESFHIYCAHMASNIIF   86 (662)
Q Consensus         7 ~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~~~~kT~vi~~~t~nP~WNE~F~~~v~~~~~~L~~   86 (662)
                      .|.|.|+|++|++|+.               .|++||||+|+ .. . .||+++++++.||+|||+|.|.+.+....|.|
T Consensus        13 ~~~L~V~V~~A~~l~~---------------~g~~DPYV~v~-~~-~-~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~   74 (167)
T 2cjs_A           13 LSLLCVGVKKAKFDGA---------------QEKFNTYVTLK-VQ-N-VESTTIAVRGSQPSWEQDFMFEINRLDLGLTV   74 (167)
T ss_dssp             CCEEEEEEEEEECSSC---------------GGGCEEEEEEE-ET-T-EEEECCCEESSSCEEEEEEEEECCCTTSEEEE
T ss_pred             eEEEEEEEEEEECCCC---------------CCCCCeEEEEE-ec-c-eEEEEecCCCCCCCCCCEEEEEeeCCCCEEEE
Confidence            4789999999998853               35689999999 32 2 36777763399999999999999877778999


Q ss_pred             EEEecCCCCCceeEEEEeeeeeecCCc------eEEEEEeccCCCCCCC----CCCCceEEEEEee
Q 006078           87 TVKDDNPIGATLIGRAYVPVEEVLGGE------EVDKWVEILDEDRNPI----SSGSKIHVKLQYF  142 (662)
Q Consensus        87 ~V~D~d~~~~~~IG~~~ipl~~l~~g~------~~~~w~~L~~~~~k~~----k~~G~i~l~l~f~  142 (662)
                      +|||+|...|++||++.|||+++....      -...|+.+..++|+..    ...+++++.++|.
T Consensus        75 ~V~D~d~~~dd~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e  140 (167)
T 2cjs_A           75 EVWNKGLIWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFE  140 (167)
T ss_dssp             EEEECCSSCCEEEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEE
T ss_pred             EEEECCCCCCceEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEee
Confidence            999999334799999999999986422      2335566554454421    1235577777773


No 43 
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.66  E-value=3.1e-16  Score=163.90  Aligned_cols=123  Identities=22%  Similarity=0.337  Sum_probs=98.9

Q ss_pred             eEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEE--CCeeeeeeeeecCCCCCCeeeeEEEEeccCC---C
Q 006078            7 HGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDL--EKARVGRTRMLKKEQSNPRWYESFHIYCAHM---A   81 (662)
Q Consensus         7 ~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l--~~~~~~kT~vi~~~t~nP~WNE~F~~~v~~~---~   81 (662)
                      .|.|.|+|++|++|+++            +..|++||||+|++  ++....||+++++ ++||+|||+|.|.+...   .
T Consensus        19 ~~~L~v~v~~a~~L~~~------------d~~g~~dPyv~v~l~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~   85 (296)
T 1dqv_A           19 SDQLVVRILQALDLPAK------------DSNGFSDPYVKIYLLPDRKKKFQTKVHRK-TLNPIFNETFQFSVPLAELAQ   85 (296)
T ss_dssp             SCEEEEEEEEEECCCCC------------STTSCCCEEEEEECTTSTTSCEECCCCCS-CSSCEEEEEEEEECCGGGGSS
T ss_pred             CCEEEEEEEEeECCCCc------------CCCCCcCeEEEEEEEcCCCeeEeCCccCC-CCCCcEeeEEEEEecHHHhcC
Confidence            58999999999999974            45678999999999  3444569999999 99999999999998532   2


Q ss_pred             ceEEEEEEecCCCC-CceeEEEEee-eeeecC-CceEEEEEeccCCCCCCCCCCCceEEEEEeec
Q 006078           82 SNIIFTVKDDNPIG-ATLIGRAYVP-VEEVLG-GEEVDKWVEILDEDRNPISSGSKIHVKLQYFD  143 (662)
Q Consensus        82 ~~L~~~V~D~d~~~-~~~IG~~~ip-l~~l~~-g~~~~~w~~L~~~~~k~~k~~G~i~l~l~f~~  143 (662)
                      ..|.|+|||.|.++ +++||++.|+ +.++.. +...+.|++|....++. ...|+|++.+.|.|
T Consensus        86 ~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~-~~~G~i~vsl~y~~  149 (296)
T 1dqv_A           86 RKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEK-ADLGELNFSLCYLP  149 (296)
T ss_dssp             CCCEEEEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCC-SCCCEEEEEEEEET
T ss_pred             CEEEEEEEEcCCCCCCceEEEEEeccccccccCCccceeeeccccccccc-cccceEEEEEEecc
Confidence            48999999999987 6999999996 444443 44567899997654332 35799999999865


No 44 
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.65  E-value=5.8e-16  Score=177.14  Aligned_cols=123  Identities=18%  Similarity=0.269  Sum_probs=103.1

Q ss_pred             eeEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECC----eeeeeeeeecCCCCCCeeeeEEEEeccCCC
Q 006078            6 LHGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEK----ARVGRTRMLKKEQSNPRWYESFHIYCAHMA   81 (662)
Q Consensus         6 ~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~----~~~~kT~vi~~~t~nP~WNE~F~~~v~~~~   81 (662)
                      ..++|.|+|++|++|+..+.          ...|++||||+|.+.+    ....||+++++++.||+|||+|.|.+..+.
T Consensus       495 ~~~~L~V~Vi~A~~L~~~d~----------~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~e  564 (624)
T 1djx_A          495 RPERLRVRIISGQQLPKVNK----------NKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPD  564 (624)
T ss_dssp             CCEEEEEEEEEEESCCCCSS----------CSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGG
T ss_pred             cceEEEEEEEEcCCCCcccc----------cccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCC
Confidence            46899999999999997420          1257899999999944    234699999994499999999999987654


Q ss_pred             -ceEEEEEEecCCCC-CceeEEEEeeeeeecCCceEEEEEeccCCCCCCCCCCCceEEEEEee
Q 006078           82 -SNIIFTVKDDNPIG-ATLIGRAYVPVEEVLGGEEVDKWVEILDEDRNPISSGSKIHVKLQYF  142 (662)
Q Consensus        82 -~~L~~~V~D~d~~~-~~~IG~~~ipl~~l~~g~~~~~w~~L~~~~~k~~k~~G~i~l~l~f~  142 (662)
                       ..|.|+|+|+|.++ +++||++.|||.+|..|   .+|++|.+..|+++ ..+.|+|.++|.
T Consensus       565 l~~L~~~V~D~D~~~~dd~iG~~~ipl~~L~~G---~r~v~L~d~~g~~~-~~~~L~v~i~~~  623 (624)
T 1djx_A          565 LALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQG---YRHVHLLSKNGDQH-PSATLFVKISIQ  623 (624)
T ss_dssp             GCEEEEEEEECCSSSCCEEEEEEEEEGGGBCCE---EEEEEEECTTSCEE-EEEEEEEEEEEE
T ss_pred             CCEEEEEEEEcCCCCCCceeEEEEEEHHHcCCC---cEEEeCCCCCcCCC-CceEEEEEEEEE
Confidence             68999999999986 69999999999999887   47999999888875 468899998885


No 45 
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.63  E-value=9.8e-16  Score=171.84  Aligned_cols=116  Identities=19%  Similarity=0.381  Sum_probs=98.9

Q ss_pred             eEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECCeeeeeeeeecCCCCCCeeeeEEEEeccCCC-ceEE
Q 006078            7 HGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEKARVGRTRMLKKEQSNPRWYESFHIYCAHMA-SNII   85 (662)
Q Consensus         7 ~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~~~~kT~vi~~~t~nP~WNE~F~~~v~~~~-~~L~   85 (662)
                      .|+|.|+|++|++|++.            +..|++||||+|.+++.+ .||+++++ |+||+|||+|.|.+.... ..|.
T Consensus       386 ~~~l~v~v~~a~~L~~~------------d~~~~sdpyv~v~~~~~~-~~T~~~~~-t~nP~w~e~f~f~~~~~~~~~l~  451 (510)
T 3jzy_A          386 IGRLMVHVIEATELKAC------------KPNGKSNPYCEISMGSQS-YTTRTIQD-TLNPKWNFNCQFFIKDLYQDVLC  451 (510)
T ss_dssp             CEEEEEEEEEEESCCCC------------STTSCCCEEEEEEETTEE-EECCCCSS-CSSCEEEEEEEEEESCTTTCEEE
T ss_pred             CceEEEEeceeecCCCC------------CCCCCCCeEEEEEECCee-ccCCccCC-CCCCccCceEEEEecCCCCCEEE
Confidence            47999999999999873            456889999999998765 69999999 999999999999987654 6799


Q ss_pred             EEEEecCCCC-CceeEEEEeeeeeecCCce----EEEEEeccCCCCCCCCCCCceEEEEEee
Q 006078           86 FTVKDDNPIG-ATLIGRAYVPVEEVLGGEE----VDKWVEILDEDRNPISSGSKIHVKLQYF  142 (662)
Q Consensus        86 ~~V~D~d~~~-~~~IG~~~ipl~~l~~g~~----~~~w~~L~~~~~k~~k~~G~i~l~l~f~  142 (662)
                      |+|||+|.++ +++||++.+||.++..+..    ...|++|.+.      ..|+|+|.+.+.
T Consensus       452 ~~v~d~d~~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~------~~G~i~l~~~l~  507 (510)
T 3jzy_A          452 LTLFDRDQFSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV------PTGEVWVRFDLQ  507 (510)
T ss_dssp             EEEEECCSSSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS------SSCEEEEEEEEE
T ss_pred             EEEEeCCCCCCCCceEEEEEEHHHhccccCCCCceeeeecCCCC------CCceEEEEEEEE
Confidence            9999999988 6999999999999986544    7889998542      458888877763


No 46 
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.62  E-value=2.7e-17  Score=183.30  Aligned_cols=121  Identities=17%  Similarity=0.275  Sum_probs=21.9

Q ss_pred             eeEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECCeeeeeeeeecCCC---CCCeeeeEEEEeccCCCc
Q 006078            6 LHGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEKARVGRTRMLKKEQ---SNPRWYESFHIYCAHMAS   82 (662)
Q Consensus         6 ~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~~~~kT~vi~~~t---~nP~WNE~F~~~v~~~~~   82 (662)
                      ..|.|+|+|++|++|+++                 .||||++++++++++||+++++ |   +||+|||+|.|.+.+..+
T Consensus         9 ~~~~L~V~VieAk~L~~~-----------------ddpYv~v~l~~~~~~kT~v~~k-t~~glnP~WnE~F~f~~~~~~~   70 (483)
T 3bxj_A            9 VDNVLKLWIIEARELPPK-----------------KRYYCELCLDDMLYARTTSKPR-SASGDTVFWGEHFEFNNLPAVR   70 (483)
T ss_dssp             EEECC---------------------------------------------------------------CCEECC------
T ss_pred             eccEEEEEEEEcCCcCCC-----------------CCCeEEEEECCeEEeeeeEEeC-CCCCCCCccccEEEEecCCCcc
Confidence            568999999999999973                 2999999999887789999998 8   999999999999755568


Q ss_pred             eEEEEEEec-CC---C-CCceeEEEEeeeeeecCCceEEEEEeccCCCC---------------------CCCCCCCceE
Q 006078           83 NIIFTVKDD-NP---I-GATLIGRAYVPVEEVLGGEEVDKWVEILDEDR---------------------NPISSGSKIH  136 (662)
Q Consensus        83 ~L~~~V~D~-d~---~-~~~~IG~~~ipl~~l~~g~~~~~w~~L~~~~~---------------------k~~k~~G~i~  136 (662)
                      .|.|+|||+ |.   + ++++||++.||++++..|+..+.|++|.++.+                     +..+..|.|+
T Consensus        71 ~L~v~V~d~~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lr  150 (483)
T 3bxj_A           71 ALRLHLYRDSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVR  150 (483)
T ss_dssp             ------------------------------------CCEECC--------------------------------------
T ss_pred             EEEEEEEecCCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEE
Confidence            899999994 52   4 47999999999999998888999999975432                     1112468899


Q ss_pred             EEEEeecc
Q 006078          137 VKLQYFDV  144 (662)
Q Consensus       137 l~l~f~~~  144 (662)
                      |+++|.+.
T Consensus       151 L~v~~~~~  158 (483)
T 3bxj_A          151 LKARYQTM  158 (483)
T ss_dssp             CEEEEEEC
T ss_pred             EEEEeeee
Confidence            99999764


No 47 
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=99.62  E-value=1.9e-15  Score=142.24  Aligned_cols=133  Identities=15%  Similarity=0.216  Sum_probs=106.4

Q ss_pred             chHHHHHHHHHcCCcEEEEEEEeeeceeEEecCCCCCCCCCcchHHHHHHHHhhcCCeEEEEEecCccccccccccCccC
Q 006078          203 RCWEDIFDAITNARHMIYITGWSVYTEISLVRDSRRPKPGGDIMLGELLKKKASEGVRVCMLVWDDRTSVSLLKKDGLMA  282 (662)
Q Consensus       203 ~~~~~l~~aI~~Ak~~I~I~~w~~~p~~~L~r~~~~~~~~~~~~l~~lL~~kA~~GV~VrvLlwd~~~s~~~~~~~~~~~  282 (662)
                      ..++.+.++|++|+++|+|+.|.|.                ...|.++|.++++|||+|+||+ |..++...        
T Consensus        14 ~~~~~~~~~i~~A~~~I~i~~~~~~----------------~~~i~~aL~~a~~rGV~Vril~-~~~~~~~~--------   68 (155)
T 1byr_A           14 SARVLVLSAIDSAKTSIRMMAYSFT----------------APDIMKALVAAKKRGVDVKIVI-DERGNTGR--------   68 (155)
T ss_dssp             HHHHHHHHHHHHCSSEEEEEESSBC----------------CHHHHHHHHHHHHTTCEEEEEE-ESTTCCSH--------
T ss_pred             cHHHHHHHHHHHHhhEEEEEEEEeC----------------CHHHHHHHHHHHHCCCEEEEEE-eCcccccc--------
Confidence            4678999999999999999998762                2479999999999999999996 76543210        


Q ss_pred             CChHHHHhhhcCCCcEEEecCCCCCCCCCcccccccccccCCccceEEEcCCCCCCCccccceeEEeccccCcCccccCC
Q 006078          283 THDEETEKFFQGTDVHCILCPRNPDDGGSFIQDIQISAMFTHHQKIVVVDSPMPNGDPERRRIMSFVGGIDLCDGRYDTP  362 (662)
Q Consensus       283 ~~~~~~~~~l~~~~v~~~~~~r~p~~~~~~~~~~~~~~~~~hHqK~vVID~~~~~~~~~~~~~vafvGG~nl~~~r~dt~  362 (662)
                       ......+.|.+.|+++..+.+                ....|.|++|||++           ++++||.|++...+   
T Consensus        69 -~~~~~~~~L~~~gv~v~~~~~----------------~~~~H~K~~iiD~~-----------~~~iGS~N~~~~~~---  117 (155)
T 1byr_A           69 -ASIAAMNYIANSGIPLRTDSN----------------FPIQHDKVIIVDNV-----------TVETGSFNFTKAAE---  117 (155)
T ss_dssp             -HHHHHHHHHHHTTCCEEEECS----------------SSCCCCCEEEETTT-----------EEEEESCCBSHHHH---
T ss_pred             -ccHHHHHHHHHCCCeEEEcCC----------------cccccceEEEECCC-----------EEEEECCCCCcccc---
Confidence             023566778888999876531                14789999999999           99999999987422   


Q ss_pred             CCcccccCCCcCCCCCCCCCCCCCCcCCCCCCCCeeeeeeeeeCH--HHHHHHHHHHHHHHhh
Q 006078          363 FHSLFRTLDTAHHDDFHQPNFPGASIEKGGPREPWHDIHSRLEGP--IAWDVLFNFEQRWRKQ  423 (662)
Q Consensus       363 ~H~l~~~~~~~~~~d~~~~~~~~~~~~~~~pr~pWhDv~~~v~Gp--aa~dl~~~F~qrW~~~  423 (662)
                                                      ..|++..+.+.|+  .+.++...|.+.|+.+
T Consensus       118 --------------------------------~~n~E~~~~i~~~~~l~~~~~~~f~~~w~~~  148 (155)
T 1byr_A          118 --------------------------------TKNSENAVVIWNMPKLAESFLEHWQDRWNQG  148 (155)
T ss_dssp             --------------------------------HTSCEEEEEEESCHHHHHHHHHHHHHHHHTC
T ss_pred             --------------------------------ccCcccEEEEcCcHHHHHHHHHHHHHHHHhC
Confidence                                            2457899999993  8999999999999864


No 48 
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.62  E-value=2.3e-15  Score=168.78  Aligned_cols=110  Identities=15%  Similarity=0.158  Sum_probs=92.1

Q ss_pred             eEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECCeeeeeeeeecCCCCCCeeeeEEEEeccC--CCceE
Q 006078            7 HGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEKARVGRTRMLKKEQSNPRWYESFHIYCAH--MASNI   84 (662)
Q Consensus         7 ~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~~~~kT~vi~~~t~nP~WNE~F~~~v~~--~~~~L   84 (662)
                      -|.|.|+|++|++|++             |..|++||||+|++++++ .||+|+++ ++||+|||+|.|.+.+  ..+.|
T Consensus       393 ~~~L~V~V~~A~~L~~-------------D~~g~sDPYV~v~l~~~~-~kTkvik~-tlNP~Wne~f~f~~~~~~~~~~L  457 (540)
T 3nsj_A          393 LAHLVVSNFRAEHLWG-------------DYTTATDAYLKVFFGGQE-FRTGVVWN-NNNPRWTDKMDFENVLLSTGGPL  457 (540)
T ss_dssp             EEEEEEEEEEEESCCC-------------SSCSCCCEEEEEEETTEE-EECCCBCS-CSSCBCCCCEEEEEEETTTCCCE
T ss_pred             ccEEEEEEEEccCCCc-------------ccCCCcCeEEEEEECCEe-eeeeeecC-CCCCCCCeEEEEEEecCCCCCEE
Confidence            5899999999999986             335679999999999876 79999999 9999999999998532  45789


Q ss_pred             EEEEEecCCCC-CceeEEEEeeeeeecCCceEEEEEeccCCCCCCCCCCCceEEEEEeecc
Q 006078           85 IFTVKDDNPIG-ATLIGRAYVPVEEVLGGEEVDKWVEILDEDRNPISSGSKIHVKLQYFDV  144 (662)
Q Consensus        85 ~~~V~D~d~~~-~~~IG~~~ipl~~l~~g~~~~~w~~L~~~~~k~~k~~G~i~l~l~f~~~  144 (662)
                      .|+|||+|.++ +|+||++.++|.   .| ..+.|++|         ..|.|++++..+..
T Consensus       458 ~~~V~D~D~~~~dD~LG~~~~~L~---~g-~~~~~~~l---------~~G~l~~~~~~~c~  505 (540)
T 3nsj_A          458 RVQVWDADYGWDDDLLGSCDRSPH---SG-FHEVTCEL---------NHGRVKFSYHAKCL  505 (540)
T ss_dssp             EEEEEECCSSSCCEEEEEEEECCC---SE-EEEEEEEC---------SSSEEEEEEEEEEC
T ss_pred             EEEEEECCCCCCCCEEEEEEEEee---CC-cEEEEEEc---------CCeEEEEEEEEEEC
Confidence            99999999987 599999999987   34 46789987         23788888776543


No 49 
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.58  E-value=7.6e-16  Score=177.81  Aligned_cols=133  Identities=15%  Similarity=0.195  Sum_probs=103.0

Q ss_pred             eeEEEEEEEEEeecCCC---CCCCCccccccCCCCCCCCCcEEEEEECC--eeeeeeeeecCCCCCCeeeeEEEEeccCC
Q 006078            6 LHGTLHVTIYEVDQLES---GGGGNFFTKLLGGLGKGGSELYATIDLEK--ARVGRTRMLKKEQSNPRWYESFHIYCAHM   80 (662)
Q Consensus         6 ~~G~L~V~I~eA~~L~~---~~~~~~~~~~~~~~~~g~~DPYv~v~l~~--~~~~kT~vi~~~t~nP~WNE~F~~~v~~~   80 (662)
                      ..|.|+|+|++|++|++   +            +..|++||||+|++++  ....||+|+++ ++||+|||+|.|.+...
T Consensus        16 ~~g~L~V~Vi~A~nL~~~~~~------------D~~g~sDPYV~V~l~~~~~~k~kTkvik~-tlNPvWNEtF~F~v~~~   82 (749)
T 1cjy_A           16 YSHKFTVVVLRATKVTKGAFG------------DMLDTPDPYVELFISTTPDSRKRTRHFNN-DINPVWNETFEFILDPN   82 (749)
T ss_dssp             CCEEEEEEEEEEECCCSCHHH------------HHHCCCCEEEEEECTTSTTCCEECCCCTT-CSSCEEEEEEEEEECTT
T ss_pred             CccEEEEEEEEEECCCCcccc------------CCCCCcCeEEEEEEecCCCCeEecceEcC-CCCCeeeeEEEEEecCC
Confidence            46899999999999986   3            2356799999999974  24569999999 99999999999999763


Q ss_pred             -CceEEEEEEecCCCCCceeEEEEeeeeeecCCceEEEEEeccCCCCCCC----CCCCceEEEEEeeccccchhhh
Q 006078           81 -ASNIIFTVKDDNPIGATLIGRAYVPVEEVLGGEEVDKWVEILDEDRNPI----SSGSKIHVKLQYFDVTKDRSWA  151 (662)
Q Consensus        81 -~~~L~~~V~D~d~~~~~~IG~~~ipl~~l~~g~~~~~w~~L~~~~~k~~----k~~G~i~l~l~f~~~~~~~~W~  151 (662)
                       ...|.|+|||+|.+++++||++.|+|.++..|...+.|++|.......+    +..+++.|++.+....+...|.
T Consensus        83 ~~~~L~~~V~D~D~~~ddfIG~v~I~L~~L~~g~~~~~w~~L~~~~e~~l~~~~e~c~~l~VRla~~Ls~eEk~fl  158 (749)
T 1cjy_A           83 QENVLEITLMDANYVMDETLGTATFTVSSMKVGEKKEVPFIFNQVTEMVLEMSLEVCSCPDLRFSMALCDQEKTFR  158 (749)
T ss_dssp             SCCBCEEEEEECCSSSCEEEEEECCBSTTSCTTCCCCEEEEETTTEEEEEEECCEECCSCSSEECSSCCHHHHHHH
T ss_pred             CCCEEEEEEEECCCCCCceeEEEEEEHHHcCCCCceEEEEecCCCceEeeecccccccccccccccccchhhhhhh
Confidence             4789999999999889999999999999998988899999964211000    1234455555555444444443


No 50 
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=99.56  E-value=4e-15  Score=148.59  Aligned_cols=150  Identities=14%  Similarity=0.160  Sum_probs=106.1

Q ss_pred             cchHHHHHHHHHcCCcEEEEEEEeeeceeEEecCCCCCCCCCcchHHHHHHHHhhcCCeEEEEEecCccccccccccCcc
Q 006078          202 HRCWEDIFDAITNARHMIYITGWSVYTEISLVRDSRRPKPGGDIMLGELLKKKASEGVRVCMLVWDDRTSVSLLKKDGLM  281 (662)
Q Consensus       202 ~~~~~~l~~aI~~Ak~~I~I~~w~~~p~~~L~r~~~~~~~~~~~~l~~lL~~kA~~GV~VrvLlwd~~~s~~~~~~~~~~  281 (662)
                      .++++.|+++|++||++|+|+.|+|.                ...|.++|++||+|||+||||+ |..++...       
T Consensus        57 ~~~~~~ii~~I~~A~~sI~i~~Y~~~----------------~~~I~~aL~~Aa~RGV~VRii~-D~~~~~~~-------  112 (220)
T 4gel_A           57 LRNVAKIVEQIDRAVYSIDLAIYTFT----------------SLFLADSIKRALQRGVIIRIIS-DGEMVYSK-------  112 (220)
T ss_dssp             HHHHHHHHHHHHTCSSEEEEECSCBC----------------CHHHHHHHHHHHHHTCEEEEEC-CTTTTTST-------
T ss_pred             HHHHHHHHHHHHHhhhEEEEEEEEeC----------------CHHHHHHHHHHHHcCCeEEEEE-echhhhhh-------
Confidence            35789999999999999999998873                3479999999999999999996 88654321       


Q ss_pred             CCChHHHHhhhcCCCcEEEecCCCCCCCCCc-ccc---cccccccCCccceEEEcCCCCCCCccccceeEEeccccCcCc
Q 006078          282 ATHDEETEKFFQGTDVHCILCPRNPDDGGSF-IQD---IQISAMFTHHQKIVVVDSPMPNGDPERRRIMSFVGGIDLCDG  357 (662)
Q Consensus       282 ~~~~~~~~~~l~~~~v~~~~~~r~p~~~~~~-~~~---~~~~~~~~hHqK~vVID~~~~~~~~~~~~~vafvGG~nl~~~  357 (662)
                          ......+...++.+............+ +-+   .....+.+.|+|++++|+.           ++++||.|++..
T Consensus       113 ----~~~~~~~~~~~~~~~~~~~~~~~h~K~~viD~~~~~~~~~~~~H~K~~v~D~~-----------~v~~GS~N~t~~  177 (220)
T 4gel_A          113 ----GSQISMLAQLGVPVRVPITTNLMHNKFCIIDGFERVEEIRLLRKLKFMRPCYS-----------IVISGSVNWTAL  177 (220)
T ss_dssp             ----TCHHHHHHHTTCCEEECCSSSCBCCCEEEESCHHHHHHHHHHTTCSCCCCCCC-----------EEEEESCCBSHH
T ss_pred             ----HHHHHHHHhcCCcEEeecccccccceeEEEcchhcccccccccceeccccccc-----------eEEecCcccccc
Confidence                122333444566554332111000000 000   0112356788888888888           999999998764


Q ss_pred             cccCCCCcccccCCCcCCCCCCCCCCCCCCcCCCCCCCCeeeeeeeeeCHHHHHHHHHHHHHHHhhc
Q 006078          358 RYDTPFHSLFRTLDTAHHDDFHQPNFPGASIEKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQG  424 (662)
Q Consensus       358 r~dt~~H~l~~~~~~~~~~d~~~~~~~~~~~~~~~pr~pWhDv~~~v~Gpaa~dl~~~F~qrW~~~~  424 (662)
                      -..                                  ..|.|+.+...|++|.++++.|.+.|+...
T Consensus       178 s~~----------------------------------~N~E~~~vi~~~~~a~~~~~~F~~~W~~~~  210 (220)
T 4gel_A          178 GLG----------------------------------GNWENCIITADDKLTATFQAEFQRMWRAFA  210 (220)
T ss_dssp             HHH----------------------------------TSBEEEEEECCHHHHHHHHHHHHHHHHHSE
T ss_pred             ccc----------------------------------cCceEEEEEECHHHHHHHHHHHHHHHHhcc
Confidence            321                                  357899999999999999999999999754


No 51 
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.55  E-value=2e-14  Score=148.89  Aligned_cols=104  Identities=26%  Similarity=0.359  Sum_probs=85.3

Q ss_pred             eEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEEC--Ce--eeeeeeeecCCCCCCeeeeEEEEeccCC--
Q 006078            7 HGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLE--KA--RVGRTRMLKKEQSNPRWYESFHIYCAHM--   80 (662)
Q Consensus         7 ~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~--~~--~~~kT~vi~~~t~nP~WNE~F~~~v~~~--   80 (662)
                      .|.|.|+|++|++|+++            +..|++||||+|++.  +.  ...||+++++ ++||+|||+|.|.+...  
T Consensus       149 ~~~l~v~v~~a~~L~~~------------d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l  215 (284)
T 2r83_A          149 AGKLTVVILEAKNLKKM------------DVGGLSDPYVKIHLMQNGKRLKKKKTTIKKN-TLNPYYNESFSFEVPFEQI  215 (284)
T ss_dssp             TTEEEEEEEEEESCCCC------------STTSCCCEEEEEEEEETTEEEEEEECCCCCS-CSSCEEEEEEEEECCTTTG
T ss_pred             CCceEEEEEEeECCCCc------------CCCCCcCeEEEEEEEeCCcEeeeeccceecC-CCCCEEceeEEEeCCHHHh
Confidence            46899999999999974            446789999999994  32  3469999999 99999999999998644  


Q ss_pred             -CceEEEEEEecCCCC-CceeEEEEeeeeeec------------CCceEEEEEeccC
Q 006078           81 -ASNIIFTVKDDNPIG-ATLIGRAYVPVEEVL------------GGEEVDKWVEILD  123 (662)
Q Consensus        81 -~~~L~~~V~D~d~~~-~~~IG~~~ipl~~l~------------~g~~~~~w~~L~~  123 (662)
                       ...|.|+|||+|.++ +++||++.|++..+.            ++..+.+|++|..
T Consensus       216 ~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~  272 (284)
T 2r83_A          216 QKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV  272 (284)
T ss_dssp             GGEEEEEEEEECCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBC
T ss_pred             CceEEEEEEEeCCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCC
Confidence             247999999999987 699999999997632            3456778888864


No 52 
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.47  E-value=1.1e-14  Score=152.25  Aligned_cols=108  Identities=27%  Similarity=0.343  Sum_probs=85.8

Q ss_pred             eEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEEC--Ce--eeeeeeeecCCCCCCeeeeEEEEeccCCC-
Q 006078            7 HGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLE--KA--RVGRTRMLKKEQSNPRWYESFHIYCAHMA-   81 (662)
Q Consensus         7 ~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~--~~--~~~kT~vi~~~t~nP~WNE~F~~~v~~~~-   81 (662)
                      .|.|.|+|++|++|+++            +..|++||||+|++.  +.  ...||+++++ ++||+|||+|.|.+.... 
T Consensus       151 ~~~l~v~v~~a~~L~~~------------d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l  217 (296)
T 1dqv_A          151 AGLLTVTIIKASNLKAM------------DLTGFSDPYVKASLISEGRRLKKRKTSIKKN-TLNPTYNEALVFDVAPESV  217 (296)
T ss_dssp             TTEEEEEEEEEESCCCC------------SSSSCCCEEEEECCCTTCCTTSCEECCCCCS-CSSCEEEECCCCCCCSGGG
T ss_pred             cceeEEEEEEeecCCcc------------CCCCCCCcEEEEEEEeCCcCccceecceecC-CCCCeECceEEEEcCHHHc
Confidence            47899999999999974            446778999999995  32  3469999998 999999999999886542 


Q ss_pred             --ceEEEEEEecCCCC-CceeEEEEeeeeeecCCceEEEEEeccCCCCCC
Q 006078           82 --SNIIFTVKDDNPIG-ATLIGRAYVPVEEVLGGEEVDKWVEILDEDRNP  128 (662)
Q Consensus        82 --~~L~~~V~D~d~~~-~~~IG~~~ipl~~l~~g~~~~~w~~L~~~~~k~  128 (662)
                        ..|.|+|||+|.++ +++||.+.|++.++.. ...++|++|+...+++
T Consensus       218 ~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~-~~~~~W~~~~~~~~~~  266 (296)
T 1dqv_A          218 ENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADP-HGREHWAEMLANPRKP  266 (296)
T ss_dssp             GSCCCCCEEEECCSSSCCEEEEECCCSSCTTCH-HHHHHHHTSSSSSSSC
T ss_pred             cCcEEEEEEEeCCCCCCCceEEEEEECCccCCc-hhHHHHHHHHhCCCCc
Confidence              47999999999997 6999999999987632 1345677766544443


No 53 
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.46  E-value=1.4e-13  Score=161.16  Aligned_cols=114  Identities=18%  Similarity=0.311  Sum_probs=94.1

Q ss_pred             eeEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECC-----eeeeeee-eecCCCCCCeeee-EEEE-ec
Q 006078            6 LHGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEK-----ARVGRTR-MLKKEQSNPRWYE-SFHI-YC   77 (662)
Q Consensus         6 ~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~-----~~~~kT~-vi~~~t~nP~WNE-~F~~-~v   77 (662)
                      ..|+|.|+|++|++|++                +++||||+|.+.+     .+..||+ ++++++.||+||| +|.| .+
T Consensus       676 ~~~~L~V~Visa~~L~~----------------~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v  739 (799)
T 2zkm_X          676 VATTLSITVISGQFLSE----------------RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKI  739 (799)
T ss_dssp             TCEEEEEEEEEEESCCS----------------SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEE
T ss_pred             eeeeEEEEEEeccccCc----------------cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEE
Confidence            46899999999999985                2489999999943     1235899 8876589999999 6999 77


Q ss_pred             cCCC-ceEEEEEEecCCCCCceeEEEEeeeeeecCCceEEEEEeccCCCCCCCCCCCceEEEEEee
Q 006078           78 AHMA-SNIIFTVKDDNPIGATLIGRAYVPVEEVLGGEEVDKWVEILDEDRNPISSGSKIHVKLQYF  142 (662)
Q Consensus        78 ~~~~-~~L~~~V~D~d~~~~~~IG~~~ipl~~l~~g~~~~~w~~L~~~~~k~~k~~G~i~l~l~f~  142 (662)
                      ..+. ..|.|+|+|+|   +++||.+.|||+.|..|   .+|++|.+..|+++ ..+.|.|.+++.
T Consensus       740 ~~~el~~Lr~~V~D~d---~d~iG~~~ipl~~L~~G---~r~v~L~~~~g~~~-~~~~Lfv~i~~~  798 (799)
T 2zkm_X          740 LMPELASLRVAVMEEG---NKFLGHRIIPINALNSG---YHHLCLHSESNMPL-TMPALFIFLEMK  798 (799)
T ss_dssp             SSGGGCEEEEEEEETT---TEEEEEEEEEGGGBCCE---EEEEEEECTTCCEE-EEEEEEEEEEEE
T ss_pred             ccCCccEEEEEEEEeC---CCccceEeeehhhcCCC---cEEEeccCCCCCCC-CceEEEEEEEEE
Confidence            5433 58999999997   79999999999999988   67999998888865 457888888774


No 54 
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.45  E-value=1.8e-13  Score=159.56  Aligned_cols=114  Identities=17%  Similarity=0.334  Sum_probs=95.1

Q ss_pred             eEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECCe------eeeeeeeecCCCCCCeeeeE-EEEe-cc
Q 006078            7 HGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEKA------RVGRTRMLKKEQSNPRWYES-FHIY-CA   78 (662)
Q Consensus         7 ~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~------~~~kT~vi~~~t~nP~WNE~-F~~~-v~   78 (662)
                      .++|.|+|++|++|+..                ++||||+|.+.+.      +..||+++++++.||+|||+ |.|. +.
T Consensus       649 ~~~L~V~Visaq~L~~~----------------~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~  712 (816)
T 3qr0_A          649 AGTIEIKIISAQFLSDK----------------QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVV  712 (816)
T ss_dssp             CEEEEEEEEEEECCCSS----------------CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEES
T ss_pred             ceEEEEEEEEcccCCCC----------------CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEcccc
Confidence            58999999999999851                4799999999541      34599999976899999998 9998 64


Q ss_pred             CCC-ceEEEEEEecCCCCCceeEEEEeeeeeecCCceEEEEEeccCCCCCCCCCCCceEEEEEeec
Q 006078           79 HMA-SNIIFTVKDDNPIGATLIGRAYVPVEEVLGGEEVDKWVEILDEDRNPISSGSKIHVKLQYFD  143 (662)
Q Consensus        79 ~~~-~~L~~~V~D~d~~~~~~IG~~~ipl~~l~~g~~~~~w~~L~~~~~k~~k~~G~i~l~l~f~~  143 (662)
                      .+. ..|.|+|+|++   +++||++.|||+.|..|   .++++|.+.+|++. ..+.|.+.+.+..
T Consensus       713 ~pela~Lrf~V~D~d---ddfiG~~~ipL~~L~~G---yR~vpL~~~~g~~~-~~atLfv~i~~~~  771 (816)
T 3qr0_A          713 LPDLAVVRIIVSEEN---GKFIGHRVMPLDGIKPG---YRHVPLRNESNRPL-GLASVFAHIVAKD  771 (816)
T ss_dssp             CGGGCEEEEEEEETT---SCEEEEEEEESTTCCCE---EEEEEEECTTSCEE-EEEEEEEEEEEEE
T ss_pred             CCCccEEEEEEEecC---CCeeeEEEEEHHHcCCc---ceEEEEeCCCCCCC-CceEEEEEEEEEe
Confidence            333 68999999985   79999999999999988   67899999988875 4578888888754


No 55 
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.45  E-value=1.7e-13  Score=160.62  Aligned_cols=114  Identities=19%  Similarity=0.330  Sum_probs=94.7

Q ss_pred             eEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECC-----eeeeeeeeecCCCCCCeeee-EEEEe-ccC
Q 006078            7 HGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEK-----ARVGRTRMLKKEQSNPRWYE-SFHIY-CAH   79 (662)
Q Consensus         7 ~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~-----~~~~kT~vi~~~t~nP~WNE-~F~~~-v~~   79 (662)
                      ..+|.|+|++|++|+..                ++||||+|.+.+     .+..||+|+++++.||+||| +|.|. +..
T Consensus       724 ~~~L~V~Visaq~L~~~----------------~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~  787 (885)
T 3ohm_B          724 ANALRVKVISGQFLSDR----------------KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVL  787 (885)
T ss_dssp             CEEEEEEEEEEESCCSS----------------CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESC
T ss_pred             ceEEEEEEEEeccCccc----------------CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEc
Confidence            45899999999999851                479999999954     12359999987589999999 69998 543


Q ss_pred             CC-ceEEEEEEecCCCCCceeEEEEeeeeeecCCceEEEEEeccCCCCCCCCCCCceEEEEEeec
Q 006078           80 MA-SNIIFTVKDDNPIGATLIGRAYVPVEEVLGGEEVDKWVEILDEDRNPISSGSKIHVKLQYFD  143 (662)
Q Consensus        80 ~~-~~L~~~V~D~d~~~~~~IG~~~ipl~~l~~g~~~~~w~~L~~~~~k~~k~~G~i~l~l~f~~  143 (662)
                      +. ..|.|+|+|+|   +++||++.|||+.|..|   .++++|.+..|++. ..+.|.+.+.+..
T Consensus       788 pela~Lrf~V~D~d---ddfiG~~~lpL~~L~~G---yR~vpL~~~~g~~l-~~atLfv~i~~~~  845 (885)
T 3ohm_B          788 PTLASLRIAAFEEG---GKFVGHRILPVSAIRSG---YHYVCLRNEANQPL-CLPALLIYTEASD  845 (885)
T ss_dssp             GGGCEEEEEEEETT---TEEEEEEEEETTTCCCE---EEEEEEECTTSCEE-EEEEEEEEEEEEE
T ss_pred             CCcCEEEEEEEcCC---ccEEeeEEEEHHHcCCC---ceEEEecCCCCCcc-CceEEEEEEEEEe
Confidence            32 58999999997   79999999999999988   67899999888865 5688988888864


No 56 
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.31  E-value=3e-12  Score=148.55  Aligned_cols=105  Identities=20%  Similarity=0.329  Sum_probs=88.6

Q ss_pred             eeEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEEC----CeeeeeeeeecCCCCCCeeeeEEEEeccCC-
Q 006078            6 LHGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLE----KARVGRTRMLKKEQSNPRWYESFHIYCAHM-   80 (662)
Q Consensus         6 ~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~----~~~~~kT~vi~~~t~nP~WNE~F~~~v~~~-   80 (662)
                      ..+.|.|+|++|++|+++            +..|++||||++.+.    .....||+++++ ++||+|||+|.|.+... 
T Consensus       170 ~~~~L~V~v~~a~~L~~~------------d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~-tlnP~wne~f~f~~~~~~  236 (674)
T 3pfq_A          170 DREVLIVVVRDAKNLVPM------------DPNGLSDPYVKLKLIPDPKSESKQKTKTIKS-SLNPEWNETFRFQLKESD  236 (674)
T ss_dssp             CSSEEEEEEEEEESCCCC------------STTSSCCEEEEEEEESCSSCCSCEECCCCSS-CSSCEEEEEEEEECCSTT
T ss_pred             ccceeeeeeecccccCCC------------CcccccCcccccccccCcccccccccccccc-ccCCCccceeeeecccCC
Confidence            467899999999999984            457889999999992    223459999999 99999999999988643 


Q ss_pred             -CceEEEEEEecCCCC-CceeEEEEeeeeeecCCceEEEEEeccCC
Q 006078           81 -ASNIIFTVKDDNPIG-ATLIGRAYVPVEEVLGGEEVDKWVEILDE  124 (662)
Q Consensus        81 -~~~L~~~V~D~d~~~-~~~IG~~~ipl~~l~~g~~~~~w~~L~~~  124 (662)
                       ...|.|+|||+|.++ +++||++.++++++..+. .+.|++|+..
T Consensus       237 ~~~~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls~  281 (674)
T 3pfq_A          237 KDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKAG-VDGWFKLLSQ  281 (674)
T ss_dssp             TTCEEEEEEEECCSSSCCEECCBCCCBTTHHHHCC-EEEEEECBCT
T ss_pred             ccceeeeEEeecccccccccccccccchhhhccCC-cccceeeccc
Confidence             357999999999997 699999999999998654 4899999864


No 57 
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.28  E-value=4.3e-11  Score=106.61  Aligned_cols=109  Identities=15%  Similarity=0.290  Sum_probs=88.3

Q ss_pred             eEEEEEEEEEeec--CCCCCCCCccccccCCCCCCCCCcEEEEEECCeeee---ee-eeecCCCCCCeeeeEEEEeccCC
Q 006078            7 HGTLHVTIYEVDQ--LESGGGGNFFTKLLGGLGKGGSELYATIDLEKARVG---RT-RMLKKEQSNPRWYESFHIYCAHM   80 (662)
Q Consensus         7 ~G~L~V~I~eA~~--L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~~~~---kT-~vi~~~t~nP~WNE~F~~~v~~~   80 (662)
                      .+.|+|...++.-  |++              .....||||.|.++.....   || ..+++ |..|+|||+|.-.+. .
T Consensus         5 ~~flRi~~~~~~~~~~~~--------------~~~~lDPy~aV~vdE~~~~e~g~t~~~K~k-T~~P~Wne~Fd~~V~-~   68 (126)
T 1yrk_A            5 APFLRIAFNSYELGSLQA--------------EDEANQPFCAVKMKEALSTERGKTLVQKKP-TMYPEWKSTFDAHIY-E   68 (126)
T ss_dssp             CCEEEEEEEEEECSSCCC--------------SSSSCCCEEEEEEEEEEEETTEEEEECCSC-CBCCCTTCEEEEECC-T
T ss_pred             CccEEeeeccccccccCC--------------ccccCCceEEEEeeeeEEcccceeecccCC-CCCcCccceEEeeee-C
Confidence            4568888866653  322              1235899999999887655   87 66666 999999999999986 5


Q ss_pred             CceEEEEEEecCCCCCceeEEEEeeeeeec-----CCceEEEEEeccCCCCCCCCCCCceEEEEEee
Q 006078           81 ASNIIFTVKDDNPIGATLIGRAYVPVEEVL-----GGEEVDKWVEILDEDRNPISSGSKIHVKLQYF  142 (662)
Q Consensus        81 ~~~L~~~V~D~d~~~~~~IG~~~ipl~~l~-----~g~~~~~w~~L~~~~~k~~k~~G~i~l~l~f~  142 (662)
                      ...|+|+|++...   +++..++|++++|.     .+...+.|++|.        +.|+|++.++|.
T Consensus        69 Gr~l~i~Vfh~a~---~fvAn~tV~~edL~~~c~~~~g~~e~WvdLe--------P~Gkl~~~i~~~  124 (126)
T 1yrk_A           69 GRVIQIVLMRAAE---EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQ--------PQAKVLMSVQYF  124 (126)
T ss_dssp             TCEEEEEEEEETT---EEEEEEEEEHHHHHHHHHTTTTEEEEEEECB--------SSCEEEEEEEEE
T ss_pred             CEEEEEEEEcCCC---CeeeEEEEEHHHHHhhhccCCCceEEEEecc--------cCcEEEEEEEEe
Confidence            6799999998776   99999999999998     466889999994        468999999985


No 58 
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=99.26  E-value=3.5e-11  Score=108.56  Aligned_cols=113  Identities=16%  Similarity=0.265  Sum_probs=90.9

Q ss_pred             eeEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEECCeee---eee-eeecCCCCCCeeeeEEEEeccCCC
Q 006078            6 LHGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDLEKARV---GRT-RMLKKEQSNPRWYESFHIYCAHMA   81 (662)
Q Consensus         6 ~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~~~---~kT-~vi~~~t~nP~WNE~F~~~v~~~~   81 (662)
                      +.+.|+|...++.--+-..           ......||||.|.++....   +|| ..+++ |..|+|||+|.-.+. ..
T Consensus         8 m~~flRi~l~~~~~~~~~~-----------~~~~~lDPY~aV~VdE~~~te~gqtl~~Kkk-T~~P~Wne~Fd~~V~-~G   74 (138)
T 2enj_A            8 MSPFLRIGLSNFDCGSCQS-----------CQGEAVNPYCAVLVKEYVESENGQMYIQKKP-TMYPPWDSTFDAHIN-KG   74 (138)
T ss_dssp             CCCCEEEEEEEEECCCCCC-----------SCCCCCCCEEEEEEEEEEEETTEEEEEEEEE-EECCCSSSEEEECCC-SS
T ss_pred             cCcceEEEeeccccCCCCC-----------cccccCCceEEEEeeeeeeccCceeecccCC-CCCccccceEeeeEE-CC
Confidence            3566888887775433210           0123589999999998766   899 77888 999999999999986 56


Q ss_pred             ceEEEEEEecCCCCCceeEEEEeeeeeec-----CCceEEEEEeccCCCCCCCCCCCceEEEEEee
Q 006078           82 SNIIFTVKDDNPIGATLIGRAYVPVEEVL-----GGEEVDKWVEILDEDRNPISSGSKIHVKLQYF  142 (662)
Q Consensus        82 ~~L~~~V~D~d~~~~~~IG~~~ipl~~l~-----~g~~~~~w~~L~~~~~k~~k~~G~i~l~l~f~  142 (662)
                      ..|+|+|++...   ++|..++|++++|.     .+...+.|++|.        +.|+|++.++|.
T Consensus        75 r~l~i~Vfh~a~---~fVAn~tV~~edL~~~ck~~~g~~e~WvdLe--------P~Gkl~v~i~~~  129 (138)
T 2enj_A           75 RVMQIIVKGKNV---DLISETTVELYSLAERCRKNNGKTEIWLELK--------PQGRMLMNARYF  129 (138)
T ss_dssp             CEEEEEEECSSC---SCCEEEEEESHHHHHHHHHTTTCEEEEEECB--------SSCEEEEEEEEC
T ss_pred             eEEEEEEEcCCC---CeeeEEEEEHHHHHhhhccCCCceEEEEecc--------cCcEEEEEEEEE
Confidence            799999997666   99999999999998     466789999994        468999999995


No 59 
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae}
Probab=98.74  E-value=2.3e-08  Score=110.27  Aligned_cols=144  Identities=16%  Similarity=0.045  Sum_probs=99.5

Q ss_pred             chHHHHHHHHHcCCcEEEEEEEeeeceeEEecCCCCCCCCCcchHHHHHHHHhhcCCeEEEEEecCccccccccccC--c
Q 006078          203 RCWEDIFDAITNARHMIYITGWSVYTEISLVRDSRRPKPGGDIMLGELLKKKASEGVRVCMLVWDDRTSVSLLKKDG--L  280 (662)
Q Consensus       203 ~~~~~l~~aI~~Ak~~I~I~~w~~~p~~~L~r~~~~~~~~~~~~l~~lL~~kA~~GV~VrvLlwd~~~s~~~~~~~~--~  280 (662)
                      ...+.+.++|.+|+++|+|++--|      +         .+..+.++|+.+|++||+|+||+ +...+..++...+  +
T Consensus       258 ~i~~~~~~lI~~A~~~I~I~tpYf------~---------p~~~~~~aL~~Aa~rGV~VrIi~-~~~~and~y~~~~~~~  321 (458)
T 3hsi_A          258 ELNQVIEDLFLQVQKKLVICTPYF------N---------FPRTLQHKIATLLENGKRVEIIV-GDKVANDFYIPPEQPF  321 (458)
T ss_dssp             HHHHHHHHHHHTCSSEEEEECSSS------C---------CCHHHHHHHHHHHTTTCEEEEEE-ECGGGSTTCCCTTSCC
T ss_pred             HHHHHHHHHHHhcccEEEEEEecc------C---------CCHHHHHHHHHHHHCCCeEEEEE-CCccccCCccCCcchh
Confidence            467899999999999999995322      2         13579999999999999999998 7764222211111  0


Q ss_pred             --cCCChHHH-----------HhhhcCCC-cEEEecCCCCCCCCCcccccccccccCCccceEEEcCCCCCCCcccccee
Q 006078          281 --MATHDEET-----------EKFFQGTD-VHCILCPRNPDDGGSFIQDIQISAMFTHHQKIVVVDSPMPNGDPERRRIM  346 (662)
Q Consensus       281 --~~~~~~~~-----------~~~l~~~~-v~~~~~~r~p~~~~~~~~~~~~~~~~~hHqK~vVID~~~~~~~~~~~~~v  346 (662)
                        +... ...           ...|.++| +.+.++..               ..+..|.|++|||++           +
T Consensus       322 ~~~~~~-~~lye~~~~~f~~~~~~l~~~G~i~V~i~~~---------------~~~~lHaK~~vvD~~-----------~  374 (458)
T 3hsi_A          322 KMAGAL-PYLYESNLRRFCEKFETQIESGQLVVRLWRD---------------GDNTYHLKGVWVDDR-----------Y  374 (458)
T ss_dssp             CGGGGH-HHHHHHHHHHHHHHTHHHHHHTSEEEEEECB---------------TTBEECCCEEEETTT-----------E
T ss_pred             hhhcch-HHHHHHhhhhhHHHHHHHHhCCCeEEEEEec---------------CCCceeEEEEEECCe-----------E
Confidence              1110 011           11244556 44443321               136899999999999           9


Q ss_pred             EEeccccCcCccccCCCCcccccCCCcCCCCCCCCCCCCCCcCCCCCCCCeeeeeeeeeCH---HHHHHHHHHHHHHHhh
Q 006078          347 SFVGGIDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFPGASIEKGGPREPWHDIHSRLEGP---IAWDVLFNFEQRWRKQ  423 (662)
Q Consensus       347 afvGG~nl~~~r~dt~~H~l~~~~~~~~~~d~~~~~~~~~~~~~~~pr~pWhDv~~~v~Gp---aa~dl~~~F~qrW~~~  423 (662)
                      +++|+.|+...-+.         +      |                    ..+.+.|.+|   .+.++...|.+.|..+
T Consensus       375 ~~vGS~N~d~RS~~---------l------N--------------------~E~~~~i~~~~~~l~~~l~~~f~~~~~~s  419 (458)
T 3hsi_A          375 ILLTGNNLNPRAWR---------L------D--------------------AENGLLIYDPQQQLLAQVEKEQNQIRQHT  419 (458)
T ss_dssp             EEEECCCCSHHHHH---------T------C--------------------EEEEEEEECTTCSSHHHHHHHHHHHHTTE
T ss_pred             EEecCCCCCcchhh---------h------C--------------------ceeEEEEeCCcHHHHHHHHHHHHHHHHhC
Confidence            99999999874331         0      0                    3788899988   7999999999999765


Q ss_pred             c
Q 006078          424 G  424 (662)
Q Consensus       424 ~  424 (662)
                      .
T Consensus       420 ~  420 (458)
T 3hsi_A          420 K  420 (458)
T ss_dssp             E
T ss_pred             e
Confidence            3


No 60 
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=98.57  E-value=3.3e-07  Score=85.47  Aligned_cols=71  Identities=21%  Similarity=0.225  Sum_probs=56.7

Q ss_pred             hHHHHHHHHHHHhccceEEEeeccccccccccccCCCCCccccccccchHHHHHHHHHHHhcCCceEEEEEecCCCCCCC
Q 006078          492 RSIQDAYIHAIRRAKNFIYIENQYFLGSSFAWSADGIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFP  571 (662)
Q Consensus       492 ~sI~~ay~~aI~~A~~~IYIEnqYFi~~~~~w~~~~~~~~~~~~~n~i~~~l~~~i~~A~~~g~~~~V~Iv~P~~peG~~  571 (662)
                      .++.++++++|.+|+++|+|+++|| ++.                     .|..+|.+|++||  ++|+|+++..+    
T Consensus        13 ~~~~~~~~~~i~~A~~~I~i~~~~~-~~~---------------------~i~~aL~~a~~rG--V~Vril~~~~~----   64 (155)
T 1byr_A           13 GSARVLVLSAIDSAKTSIRMMAYSF-TAP---------------------DIMKALVAAKKRG--VDVKIVIDERG----   64 (155)
T ss_dssp             THHHHHHHHHHHHCSSEEEEEESSB-CCH---------------------HHHHHHHHHHHTT--CEEEEEEESTT----
T ss_pred             CcHHHHHHHHHHHHhhEEEEEEEEe-CCH---------------------HHHHHHHHHHHCC--CEEEEEEeCcc----
Confidence            4789999999999999999999998 322                     6899999999999  99999999754    


Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q 006078          572 ESGSVQAILDWQRRTMDMMYKDVVQALRAKGIM  604 (662)
Q Consensus       572 ~~~~v~~il~~~~~ti~~~~~si~~~L~~~gi~  604 (662)
                      +..       +.       ..++++.|+++|++
T Consensus        65 ~~~-------~~-------~~~~~~~L~~~gv~   83 (155)
T 1byr_A           65 NTG-------RA-------SIAAMNYIANSGIP   83 (155)
T ss_dssp             CCS-------HH-------HHHHHHHHHHTTCC
T ss_pred             ccc-------cc-------cHHHHHHHHHCCCe
Confidence            111       11       13578889998874


No 61 
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A*
Probab=98.55  E-value=2.4e-07  Score=103.65  Aligned_cols=156  Identities=19%  Similarity=0.243  Sum_probs=92.6

Q ss_pred             hHHHHHHHHHcCCcEEEEEEEeeeceeEEecCCCCCCCCCcchHHHHHHHHhhcCCeEEEEEecCccccccccccCccCC
Q 006078          204 CWEDIFDAITNARHMIYITGWSVYTEISLVRDSRRPKPGGDIMLGELLKKKASEGVRVCMLVWDDRTSVSLLKKDGLMAT  283 (662)
Q Consensus       204 ~~~~l~~aI~~Ak~~I~I~~w~~~p~~~L~r~~~~~~~~~~~~l~~lL~~kA~~GV~VrvLlwd~~~s~~~~~~~~~~~~  283 (662)
                      ..+.+.++|.+||++|+|+.--|+|  |++....     .+..+.++|+++++|||+|+||+ +...........+ ...
T Consensus       315 ~~~~~~~~I~~A~~~I~I~tq~~~p--yf~p~~~-----~~~~i~~aL~~Aa~rGV~VrIl~-~~~~~~~~~~~a~-~~~  385 (506)
T 1v0w_A          315 EESALRALVASAKGHIEISQQDLNA--TCPPLPR-----YDIRLYDALAAKMAAGVKVRIVV-SDPANRGAVGSGG-YSQ  385 (506)
T ss_dssp             HHHHHHHHHHTCSSEEEEEESCSSC--CTTTSCS-----CCHHHHHHHHHHHHTTCEEEEEE-CCGGGCC-------CCC
T ss_pred             HHHHHHHHHhCcCcEEEEEeccccc--cccCccc-----chHHHHHHHHHHHhCCCcEEEEe-CCCCchHHHHHhH-HHH
Confidence            5789999999999999999633322  2221100     24589999999999999999998 6543111100000 000


Q ss_pred             Ch--HHH------HhhhcCC-----------CcEEEecCCCCCCCCCcccccccccccCCccceEEEcCCCCCCCccccc
Q 006078          284 HD--EET------EKFFQGT-----------DVHCILCPRNPDDGGSFIQDIQISAMFTHHQKIVVVDSPMPNGDPERRR  344 (662)
Q Consensus       284 ~~--~~~------~~~l~~~-----------~v~~~~~~r~p~~~~~~~~~~~~~~~~~hHqK~vVID~~~~~~~~~~~~  344 (662)
                      ..  .+.      ...+.++           ++++.-+...+..      ....+.....|.|++|||++          
T Consensus       386 ~~~L~~~~~~l~~gv~ll~~g~~e~~~~~~~~l~i~~~~~~~~~------~~~~~~~~~lHaK~~vvD~~----------  449 (506)
T 1v0w_A          386 IKSLSEISDTLRNRLANITGGQQAAKTAMCSNLQLATFRSSPNG------KWADGHPYAQHHKLVSVDSS----------  449 (506)
T ss_dssp             CSCTHHHHHHHHHHHHHHHTSHHHHHHHHHHHEEEEECCSSSSS------SCTTSCCCCBCCEEEEETTT----------
T ss_pred             HHHHHHhhhhhcccchhcccccchhccccccceeeeeccccCcc------ccccCccccceEEEEEECCc----------
Confidence            00  000      0000011           1243212110000      00001134799999999999          


Q ss_pred             eeEEeccccCcCccccCCCCcccccCCCcCCCCCCCCCCCCCCcCCCCCCCCeeeeeeeeeCH-HHHHHHHHHHHH-HHh
Q 006078          345 IMSFVGGIDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFPGASIEKGGPREPWHDIHSRLEGP-IAWDVLFNFEQR-WRK  422 (662)
Q Consensus       345 ~vafvGG~nl~~~r~dt~~H~l~~~~~~~~~~d~~~~~~~~~~~~~~~pr~pWhDv~~~v~Gp-aa~dl~~~F~qr-W~~  422 (662)
                       ++++|+.|+.. |.                                     ++++.+.|++| .|.++...|.++ |+.
T Consensus       450 -~~~vGS~N~d~-rS-------------------------------------~~E~~l~i~~~~~a~~l~~~f~~~~w~~  490 (506)
T 1v0w_A          450 -TFYIGSKNLYP-SW-------------------------------------LQDFGYIVESPEAAKQLDAKLLDPQWKY  490 (506)
T ss_dssp             -EEEEESCCSSC-CC-------------------------------------SBCEEEEEECHHHHHHHHHHTHHHHHHH
T ss_pred             -EEEEeCCCCCC-cc-------------------------------------hhhceeEecCHHHHHHHHHHHHHHHHhh
Confidence             99999999943 22                                     14889999997 689999999975 875


Q ss_pred             h
Q 006078          423 Q  423 (662)
Q Consensus       423 ~  423 (662)
                      .
T Consensus       491 s  491 (506)
T 1v0w_A          491 S  491 (506)
T ss_dssp             H
T ss_pred             c
Confidence            4


No 62 
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=98.28  E-value=1.7e-06  Score=84.46  Aligned_cols=49  Identities=14%  Similarity=0.180  Sum_probs=42.1

Q ss_pred             hHHHHHHHHHHHhccceEEEeeccccccccccccCCCCCccccccccchHHHHHHHHHHHhcCCceEEEEEec
Q 006078          492 RSIQDAYIHAIRRAKNFIYIENQYFLGSSFAWSADGIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVP  564 (662)
Q Consensus       492 ~sI~~ay~~aI~~A~~~IYIEnqYFi~~~~~w~~~~~~~~~~~~~n~i~~~l~~~i~~A~~~g~~~~V~Iv~P  564 (662)
                      .+....++++|++|+++|+|+. |++++.                     +|+++|..|++||  |+|+||+-
T Consensus        45 ~~~~~~ll~~I~~A~~sI~i~~-y~~~~~---------------------~i~~aL~~aa~rG--V~Vrii~D   93 (196)
T 4ggj_A           45 ESSLSRLLRALLAARSSLELCL-FAFSSP---------------------QLGRAVQLLHQRG--VRVRVITD   93 (196)
T ss_dssp             CCHHHHHHHHHHTCSSEEEEEE-SCBCCH---------------------HHHHHHHHHHHTT--CEEEEEES
T ss_pred             HHHHHHHHHHHHHhheEEEEEE-EEeCCH---------------------HHHHHHHHHHHcC--CcEEEEEe
Confidence            4566889999999999999997 666543                     7999999999999  99999985


No 63 
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*
Probab=97.78  E-value=2.7e-05  Score=89.43  Aligned_cols=69  Identities=17%  Similarity=0.186  Sum_probs=53.2

Q ss_pred             HHHHHHHHhccc-----eEEEeeccccccccccccCCCCCccccccccchHHHHHHHHHHHhcCCceEEEEEecCCCCCC
Q 006078          496 DAYIHAIRRAKN-----FIYIENQYFLGSSFAWSADGIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGF  570 (662)
Q Consensus       496 ~ay~~aI~~A~~-----~IYIEnqYFi~~~~~w~~~~~~~~~~~~~n~i~~~l~~~i~~A~~~g~~~~V~Iv~P~~peG~  570 (662)
                      ++++++|++|++     .|+| ++||+++..                    .|+++|+.|+++|  ++|+|++|..+  .
T Consensus       350 ~~v~~~I~~A~~dp~v~~I~i-t~Y~~~~d~--------------------~I~~AL~~AA~rG--V~VrVLvd~~a--~  404 (687)
T 1xdp_A          350 EHVLELLRQASFDPSVLAIKI-NIYRVAKDS--------------------RIIDSMIHAAHNG--KKVTVVVELQA--R  404 (687)
T ss_dssp             HHHHHHHHHHHHCTTEEEEEE-EESSCCTTC--------------------HHHHHHHHHHHTT--CEEEEEECTTC--S
T ss_pred             hhHHHHHHHHhhCCcceEEEE-EeeeecCcH--------------------HHHHHHHHHHhcC--CEEEEEECCCc--c
Confidence            467889999997     9999 999994321                    7999999999999  99999999875  1


Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q 006078          571 PESGSVQAILDWQRRTMDMMYKDVVQALRAKGIM  604 (662)
Q Consensus       571 ~~~~~v~~il~~~~~ti~~~~~si~~~L~~~gi~  604 (662)
                      .+.        +++       .++++.|.++|+.
T Consensus       405 ~~~--------~~n-------~~~~~~L~~aGV~  423 (687)
T 1xdp_A          405 FDE--------EAN-------IHWAKRLTEAGVH  423 (687)
T ss_dssp             STT--------TTT-------TTTTHHHHHHTCE
T ss_pred             cch--------hhH-------HHHHHHHHHCCCE
Confidence            111        111       1467889999985


No 64 
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=97.58  E-value=0.00024  Score=70.06  Aligned_cols=50  Identities=20%  Similarity=0.136  Sum_probs=42.6

Q ss_pred             hHHHHHHHHHHHhccceEEEeeccccccccccccCCCCCccccccccchHHHHHHHHHHHhcCCceEEEEEecC
Q 006078          492 RSIQDAYIHAIRRAKNFIYIENQYFLGSSFAWSADGIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPM  565 (662)
Q Consensus       492 ~sI~~ay~~aI~~A~~~IYIEnqYFi~~~~~w~~~~~~~~~~~~~n~i~~~l~~~i~~A~~~g~~~~V~Iv~P~  565 (662)
                      ....+..+++|.+||+.|+|+. |++++.                     +|+++|.+|++||  |+|+||+-.
T Consensus        57 ~~~~~~ii~~I~~A~~sI~i~~-Y~~~~~---------------------~I~~aL~~Aa~RG--V~VRii~D~  106 (220)
T 4gel_A           57 LRNVAKIVEQIDRAVYSIDLAI-YTFTSL---------------------FLADSIKRALQRG--VIIRIISDG  106 (220)
T ss_dssp             HHHHHHHHHHHHTCSSEEEEEC-SCBCCH---------------------HHHHHHHHHHHHT--CEEEEECCT
T ss_pred             HHHHHHHHHHHHHhhhEEEEEE-EEeCCH---------------------HHHHHHHHHHHcC--CeEEEEEec
Confidence            3456678999999999999996 776653                     7999999999999  999999964


No 65 
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=96.67  E-value=0.0041  Score=71.16  Aligned_cols=70  Identities=17%  Similarity=0.205  Sum_probs=51.5

Q ss_pred             HHHHHHHHHhccc-----eEEEeeccccccccccccCCCCCccccccccchHHHHHHHHHHHhcCCceEEEEEecCCCCC
Q 006078          495 QDAYIHAIRRAKN-----FIYIENQYFLGSSFAWSADGIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEG  569 (662)
Q Consensus       495 ~~ay~~aI~~A~~-----~IYIEnqYFi~~~~~w~~~~~~~~~~~~~n~i~~~l~~~i~~A~~~g~~~~V~Iv~P~~peG  569 (662)
                      ..+++++|++|++     .|.+ +.|.+++.                    ..|+++|++|+++|  ++|+|++-...-.
T Consensus       354 f~~vi~~I~~A~~DP~V~sIk~-tlYr~~~d--------------------s~Iv~ALi~AA~rG--v~V~vLvel~arf  410 (705)
T 2o8r_A          354 YDYVVRLLMEAAISPDVSEIRL-TQYRVAEN--------------------SSIISALEAAAQSG--KKVSVFVELKARF  410 (705)
T ss_dssp             SHHHHHHHHHHHTCTTEEEEEE-EESCCCSC--------------------CHHHHHHHHHHHTT--CEEEEEECCCSCC
T ss_pred             HHHHHHHHHHhccCCCceEEEE-EEEEEcCC--------------------HHHHHHHHHHHHCC--CEEEEEEeCCCCc
Confidence            3689999999999     9996 46766542                    17999999999999  9999999864311


Q ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q 006078          570 FPESGSVQAILDWQRRTMDMMYKDVVQALRAKGIM  604 (662)
Q Consensus       570 ~~~~~~v~~il~~~~~ti~~~~~si~~~L~~~gi~  604 (662)
                      +.+.. .                .++++|.++|++
T Consensus       411 dee~n-i----------------~wa~~Le~aGv~  428 (705)
T 2o8r_A          411 DEENN-L----------------RLSERMRRSGIR  428 (705)
T ss_dssp             ----C-H----------------HHHHHHHHHTCE
T ss_pred             chhhh-H----------------HHHHHHHHCCCE
Confidence            11111 1                367889999986


No 66 
>2f5t_X Archaeal transcriptional regulator TRMB; sugar-binding; HET: MAL; 1.45A {Thermococcus litoralis} SCOP: b.38.5.1 d.136.1.5
Probab=93.77  E-value=0.068  Score=53.15  Aligned_cols=50  Identities=18%  Similarity=0.088  Sum_probs=42.2

Q ss_pred             chHHHHHHHHHcCCcEEEEEEEeeeceeEEecCCCCCCCCCcchHHHHHHHHhhcCCeEEEEEecC
Q 006078          203 RCWEDIFDAITNARHMIYITGWSVYTEISLVRDSRRPKPGGDIMLGELLKKKASEGVRVCMLVWDD  268 (662)
Q Consensus       203 ~~~~~l~~aI~~Ak~~I~I~~w~~~p~~~L~r~~~~~~~~~~~~l~~lL~~kA~~GV~VrvLlwd~  268 (662)
                      ...+.+.+.|++|+++|++..|.          +      .-..|.+.|++|++|||.|+|+++..
T Consensus        10 ~Ii~r~~e~I~~A~~el~lsi~~----------e------~l~~l~~~L~~A~~rGV~V~liv~~~   59 (233)
T 2f5t_X           10 EAIEMFRESLYSAKNEVIVVTPS----------E------FFETIREDLIKTLERGVTVSLYIDKI   59 (233)
T ss_dssp             HHHHHHHHHHHTCSSEEEEEECG----------G------GHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             HHHHHHHHHHHHhhhEEEEEeCH----------H------HHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence            35789999999999999998762          1      23589999999999999999999654


No 67 
>3qph_A TRMB, A global transcription regulator; transcriptional regulator; HET: SUC; 2.99A {Pyrococcus furiosus}
Probab=93.48  E-value=0.16  Score=53.54  Aligned_cols=47  Identities=19%  Similarity=0.139  Sum_probs=39.2

Q ss_pred             chHHHHHHHHHcCCcEEEEEEEeeeceeEEecCCCCCCCCCcchHHHHHHHHhhcCCeEEEEE
Q 006078          203 RCWEDIFDAITNARHMIYITGWSVYTEISLVRDSRRPKPGGDIMLGELLKKKASEGVRVCMLV  265 (662)
Q Consensus       203 ~~~~~l~~aI~~Ak~~I~I~~w~~~p~~~L~r~~~~~~~~~~~~l~~lL~~kA~~GV~VrvLl  265 (662)
                      ...+.+.+.|.+|+++|++..|.-                .-..+.+.|+++++|||+|++++
T Consensus       119 ~I~~ri~eli~~A~~eI~i~~~~~----------------~l~~l~~~L~~a~~RGV~Vrvi~  165 (342)
T 3qph_A          119 EAIEMFRESLYSAKNEVIVVTPSE----------------FFETIREDLIKTLERGVTVSLYI  165 (342)
T ss_dssp             HHHHHHHHHHHHCSSEEEEEECHH----------------HHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             HHHHHHHHHHHhhheEEEEEeCHH----------------HHHHHHHHHHHHHhCCCEEEEEE
Confidence            457889999999999999997521                12468899999999999999997


No 68 
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=88.91  E-value=1.4  Score=52.15  Aligned_cols=87  Identities=11%  Similarity=0.148  Sum_probs=57.7

Q ss_pred             eeEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEE--CCeeee---eeeeecCCCCCCeeeeEEEEec--c
Q 006078            6 LHGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDL--EKARVG---RTRMLKKEQSNPRWYESFHIYC--A   78 (662)
Q Consensus         6 ~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l--~~~~~~---kT~vi~~~t~nP~WNE~F~~~v--~   78 (662)
                      +...+.|+|..+.++...               ..++-||++.+  |++...   .|+.+.- ..+|.|||.++|++  .
T Consensus       215 ~~~~f~i~i~~~~~~~~~---------------~~~~~~V~~~l~~g~~~l~~~~~T~~~~~-~~~~~Wne~l~f~i~i~  278 (940)
T 2wxf_A          215 LEQPFSIELIEGRKVNAD---------------ERMKLVVQAGLFHGNEMLCKTVSSSEVNV-CSEPVWKQRLEFDISVC  278 (940)
T ss_dssp             CCSEEEEEEEEEECCCC------------------CEEEEEEEEEETTEESSCCEECCCEES-CSSCEEEEEEEEEEEGG
T ss_pred             cCCceEEEEEEecccCCC---------------CCceEEEEEEEEECCEEccCceecccccC-CCCcccceEEEcccccc
Confidence            346789999999998751               23578988777  555432   4555544 67899999877755  3


Q ss_pred             C--CCceEEEEEEecCCC--C-----------CceeEEEEeeeee
Q 006078           79 H--MASNIIFTVKDDNPI--G-----------ATLIGRAYVPVEE  108 (662)
Q Consensus        79 ~--~~~~L~~~V~D~d~~--~-----------~~~IG~~~ipl~~  108 (662)
                      +  ..+.|.|+|++...-  +           ...||.+.++|=+
T Consensus       279 dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd  323 (940)
T 2wxf_A          279 DLPRMARLCFALYAVVEKAKKARSTKKKSKKADCPIAWANLMLFD  323 (940)
T ss_dssp             GCCTTCEEEEEEEEEC----------------CEEEEEEEEESBC
T ss_pred             cCCcccEEEEEEEEecCCccCccccccccccccceEEEEeeeEEC
Confidence            2  246899999985321  1           2478888887743


No 69 
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=88.70  E-value=1.1  Score=43.68  Aligned_cols=38  Identities=18%  Similarity=0.436  Sum_probs=30.4

Q ss_pred             eeeeeecCCCCCCeeeeEEEEeccCC---CceEEEEEEecCC
Q 006078           55 GRTRMLKKEQSNPRWYESFHIYCAHM---ASNIIFTVKDDNP   93 (662)
Q Consensus        55 ~kT~vi~~~t~nP~WNE~F~~~v~~~---~~~L~~~V~D~d~   93 (662)
                      .+|.|... ..+|.|||++.+.++..   ...|.|++++...
T Consensus        79 ~~S~V~YH-nk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~  119 (220)
T 3l4c_A           79 YKSVIYYQ-VKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSS  119 (220)
T ss_dssp             EECCCCTT-CSSCCCCEEEEEEECTTSSTTEEEEEEEEECCC
T ss_pred             EEEEEEEc-CCCCCceEeEEEeeChhhcCCeEEEEEEEEecc
Confidence            58888887 89999999999887643   3689999987543


No 70 
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=85.80  E-value=2.4  Score=50.79  Aligned_cols=98  Identities=13%  Similarity=0.276  Sum_probs=63.9

Q ss_pred             eeEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEE--CCeeee---eeeeecCCCCCCeeeeEEEEec--c
Q 006078            6 LHGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDL--EKARVG---RTRMLKKEQSNPRWYESFHIYC--A   78 (662)
Q Consensus         6 ~~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l--~~~~~~---kT~vi~~~t~nP~WNE~F~~~v--~   78 (662)
                      +...+.|+|+.|.++...             .....+-||.+.|  |++...   +|+.+  ...+|.|||..+|++  .
T Consensus       353 ~~~~f~v~i~~~~~~n~~-------------~~~~~~~~V~~~l~hG~~~L~~~~~T~~~--~~~~~~Wne~l~f~i~i~  417 (1091)
T 3hhm_A          353 INSALRIKILCATYVNVN-------------IRDIDKIYVRTGIYHGGEPLCDNVNTQRV--PCSNPRWNEWLNYDIYIP  417 (1091)
T ss_dssp             CCSEEEEEEEEESCCCCC-------------CSSCCCCCEEEEEESSSCSSCCEECCCCC--CTTSCEEEEEEEEEEEGG
T ss_pred             CCCCEEEEEEEecCCCCC-------------ccccceEEEEEEEEECCEEccCceecccc--CCCCCCCCeeEEecCccc
Confidence            356789999999988641             1223578998888  554432   34333  266889999866654  3


Q ss_pred             C--CCceEEEEEEecCCCC-----CceeEEEEeeeee----ecCCc-eEEEE
Q 006078           79 H--MASNIIFTVKDDNPIG-----ATLIGRAYVPVEE----VLGGE-EVDKW  118 (662)
Q Consensus        79 ~--~~~~L~~~V~D~d~~~-----~~~IG~~~ipl~~----l~~g~-~~~~w  118 (662)
                      +  ..+.|.|+|++....+     ...||.+.++|=+    |..|. ....|
T Consensus       418 dLPr~arL~~tl~~~~~~~~~~~~~~~lg~~n~~lfd~~~~L~~G~~~L~lW  469 (1091)
T 3hhm_A          418 DLPRAARLCLSICSVKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMALNLW  469 (1091)
T ss_dssp             GCCTTCEEEEEECCCCCCC-------CCEEEEEESBCTTCBBCCEEEEEECE
T ss_pred             cCChhcEEEEEEEEecCccCcccccceeEEeeeeeEccCCeEEcCCeEEEee
Confidence            3  2478999999865431     2589999999844    33454 34567


No 71 
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=81.04  E-value=8.1  Score=35.60  Aligned_cols=122  Identities=11%  Similarity=0.134  Sum_probs=79.3

Q ss_pred             EEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCc--EEEEEECCeeeeeeeeecCCCCCCeeeeEEEEeccCC-----
Q 006078            8 GTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSEL--YATIDLEKARVGRTRMLKKEQSNPRWYESFHIYCAHM-----   80 (662)
Q Consensus         8 G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DP--Yv~v~l~~~~~~kT~vi~~~t~nP~WNE~F~~~v~~~-----   80 (662)
                      +.++|.|.+|. |.+.    .++.      .+..+|  ||++.+-+.+..-|.+..  +.+|.+|-+-++.|.-.     
T Consensus        18 nlfEihi~~~~-~~~~----~l~~------~~d~~p~tF~t~dF~dfEtq~Tpv~~--G~~p~y~fts~Y~V~~d~~fl~   84 (156)
T 2yrb_A           18 NLFEIHINKVT-FSSE----VLQA------SGDKEPVTFCTYAFYDFELQTTPVVR--GLHPEYNFTSQYLVHVNDLFLQ   84 (156)
T ss_dssp             EEEEEEEEEEC-CCHH----HHHH------HCSSCCEEEEEECSTTCCCEECCCEE--SSSCCCCEEEEEEECCSHHHHH
T ss_pred             cEEEEEEeEEE-EcHH----HHhh------ccccCCcEEEEEEEeceEeeeccccc--CCCCCcceEEEEEEEeCHHHHH
Confidence            67899999885 3331    1110      112355  566666555554566664  89999999866655322     


Q ss_pred             ---CceEEEEEEecCCCCC-ceeEEEEeeeeeecC-CceEEEEEeccCCCCCCCCCCCceEEEEEeecc
Q 006078           81 ---ASNIIFTVKDDNPIGA-TLIGRAYVPVEEVLG-GEEVDKWVEILDEDRNPISSGSKIHVKLQYFDV  144 (662)
Q Consensus        81 ---~~~L~~~V~D~d~~~~-~~IG~~~ipl~~l~~-g~~~~~w~~L~~~~~k~~k~~G~i~l~l~f~~~  144 (662)
                         ...|.+++....- ++ +.||.+.|+|.++.. .+.+..-.+|.+.+|.. ..-|.|.+.|++...
T Consensus        85 yL~~~~l~lELhqa~g-~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g~~-~~~G~LeywiRL~~P  151 (156)
T 2yrb_A           85 YIQKNTITLEVHQAYS-TEYETIAACQLKFHEILEKSGRIFCTASLIGTKGDI-PNFGTVEYWFRLRVS  151 (156)
T ss_dssp             HHHHCCEEEEEEEECS-SCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSSCC-TTSEEEEEEEEEEEC
T ss_pred             HHhcCCEEEEEEEeeC-CCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCCCc-ceEEEEEEEEEEecc
Confidence               2367777776432 24 899999999999884 34466777888776632 245899988888543


No 72 
>3qph_A TRMB, A global transcription regulator; transcriptional regulator; HET: SUC; 2.99A {Pyrococcus furiosus}
Probab=78.78  E-value=3.1  Score=43.55  Aligned_cols=53  Identities=15%  Similarity=0.207  Sum_probs=43.7

Q ss_pred             hhHHHHHHHHHHHhccceEEEeeccccccccccccCCCCCccccccccchHHHHHHHHHHHhcCCceEEEEEecCCC
Q 006078          491 DRSIQDAYIHAIRRAKNFIYIENQYFLGSSFAWSADGIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWP  567 (662)
Q Consensus       491 e~sI~~ay~~aI~~A~~~IYIEnqYFi~~~~~w~~~~~~~~~~~~~n~i~~~l~~~i~~A~~~g~~~~V~Iv~P~~p  567 (662)
                      ...|.+....+|++|++.||+..++..-                      .++...|.+|.+||  ++|.+++|..|
T Consensus       117 ~~~I~~ri~eli~~A~~eI~i~~~~~~l----------------------~~l~~~L~~a~~RG--V~Vrvi~~~~~  169 (342)
T 3qph_A          117 FDEAIEMFRESLYSAKNEVIVVTPSEFF----------------------ETIREDLIKTLERG--VTVSLYIDKIP  169 (342)
T ss_dssp             HHHHHHHHHHHHHHCSSEEEEEECHHHH----------------------HHHHHHHHHHHHTT--CEEEEEESSCC
T ss_pred             HHHHHHHHHHHHHhhheEEEEEeCHHHH----------------------HHHHHHHHHHHhCC--CEEEEEECCCC
Confidence            4689999999999999999998754321                      26778888999999  99999998654


No 73 
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=77.72  E-value=7.3  Score=46.24  Aligned_cols=88  Identities=9%  Similarity=0.049  Sum_probs=53.7

Q ss_pred             eEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEE--CCeeee--eeeeecCCCCCCeeeeEEEEec--cC-
Q 006078            7 HGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDL--EKARVG--RTRMLKKEQSNPRWYESFHIYC--AH-   79 (662)
Q Consensus         7 ~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l--~~~~~~--kT~vi~~~t~nP~WNE~F~~~v--~~-   79 (662)
                      ...+.|+|+.+.....             ..+..++-||++.|  |++...  +|+-+.- +.+|.|||.++|++  .+ 
T Consensus       217 ~~~f~i~i~~~~~~~~-------------~~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~-~~~~~Wne~l~f~i~i~dL  282 (961)
T 1e7u_A          217 DRKFRVKIRGIDIPVL-------------PRTADLTVFVEANIQYGQQVLCQRRTSPKPF-TEEVLWNVWLEFSIKIKDL  282 (961)
T ss_dssp             CSEEEEEEEEEECSSC-------------CTTSCEEEEEEEEEEETTEEEEEEECCCEEC-CSEEEEEEEEEEEEEGGGC
T ss_pred             cCceEEEEeecccccc-------------cCCCCceEEEEEEEEECCEEcccceeecccc-CCCcccceeEEeccccccC
Confidence            3567888888764210             01223578988766  665443  4544444 66899999877654  33 


Q ss_pred             -CCceEEEEEEecCCCC-----------------CceeEEEEeeeee
Q 006078           80 -MASNIIFTVKDDNPIG-----------------ATLIGRAYVPVEE  108 (662)
Q Consensus        80 -~~~~L~~~V~D~d~~~-----------------~~~IG~~~ipl~~  108 (662)
                       ..+.|.|+|++....+                 ...||.+.++|=+
T Consensus       283 Pr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd  329 (961)
T 1e7u_A          283 PKGALLNLQIYCGAKPALSGKTSAEMPSPESKGKAQLLYYVNLLLID  329 (961)
T ss_dssp             CTTCEEEEEEEEEEC--------------------CEEEEEEEESBC
T ss_pred             CcccEEEEEEEecccCccccccccccccccccccceeEEEEeeeeec
Confidence             2468999999743211                 2478888887743


No 74 
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=70.79  E-value=2.8  Score=50.36  Aligned_cols=69  Identities=10%  Similarity=0.222  Sum_probs=47.2

Q ss_pred             eEEEEEEEEEeecCCCCCCCCccccccCCCCCCCCCcEEEEEE--CCeeee---eeeeecCCCCCCeeeeEEEEec--cC
Q 006078            7 HGTLHVTIYEVDQLESGGGGNFFTKLLGGLGKGGSELYATIDL--EKARVG---RTRMLKKEQSNPRWYESFHIYC--AH   79 (662)
Q Consensus         7 ~G~L~V~I~eA~~L~~~~~~~~~~~~~~~~~~g~~DPYv~v~l--~~~~~~---kT~vi~~~t~nP~WNE~F~~~v--~~   79 (662)
                      ...+.|+|..+.++...               ..++-||++.+  |++...   +|+.+.- +.+|.|||.++|++  .+
T Consensus       352 ~~~f~i~i~~~~~~~~~---------------~~~~~~V~~~l~~g~~~L~~~~~T~~~~~-~~~~~Wnewl~f~i~~~d  415 (1092)
T 2y3a_A          352 NNPFQITLVKGNKLNTE---------------ETVKVHVRAGLFHGTELLCKTVVSSEISG-KNDHIWNEQLEFDINICD  415 (1092)
T ss_dssp             CSEEEEEECCCCCCCCC---------------SSCCCCCBCCEEETTEESSCCCBCCCCCS-SSCCCCCEEEEEEEESSS
T ss_pred             CCCEEEEEEEeccCCCC---------------CCceEEEEEEEEECCEEccCceecccccC-CCCCccceeEEeCCcccc
Confidence            45788899988888642               23577887555  665442   4555444 67899999877655  33


Q ss_pred             C--CceEEEEEEec
Q 006078           80 M--ASNIIFTVKDD   91 (662)
Q Consensus        80 ~--~~~L~~~V~D~   91 (662)
                      .  .+.|.|+||+.
T Consensus       416 LPr~a~L~~ti~~~  429 (1092)
T 2y3a_A          416 LPRMARLCFAVYAV  429 (1092)
T ss_dssp             CCTTCEEEEECCCC
T ss_pred             CChhcEEEEEEEEe
Confidence            2  36899999985


No 75 
>2f5t_X Archaeal transcriptional regulator TRMB; sugar-binding; HET: MAL; 1.45A {Thermococcus litoralis} SCOP: b.38.5.1 d.136.1.5
Probab=70.03  E-value=8.8  Score=37.78  Aligned_cols=52  Identities=17%  Similarity=0.248  Sum_probs=41.5

Q ss_pred             hhHHHHHHHHHHHhccceEEEeeccccccccccccCCCCCccccccccchHHHHHHHHHHHhcCCceEEEEEecCC
Q 006078          491 DRSIQDAYIHAIRRAKNFIYIENQYFLGSSFAWSADGIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMW  566 (662)
Q Consensus       491 e~sI~~ay~~aI~~A~~~IYIEnqYFi~~~~~w~~~~~~~~~~~~~n~i~~~l~~~i~~A~~~g~~~~V~Iv~P~~  566 (662)
                      ...|.+-...+|++|++-|++    .++...                  -.+|...|.+|.++|  +.|+|++...
T Consensus         8 ~e~Ii~r~~e~I~~A~~el~l----si~~e~------------------l~~l~~~L~~A~~rG--V~V~liv~~~   59 (233)
T 2f5t_X            8 FDEAIEMFRESLYSAKNEVIV----VTPSEF------------------FETIREDLIKTLERG--VTVSLYIDKI   59 (233)
T ss_dssp             HHHHHHHHHHHHHTCSSEEEE----EECGGG------------------HHHHHHHHHHHHHTT--CEEEEEESSC
T ss_pred             HHHHHHHHHHHHHHhhhEEEE----EeCHHH------------------HHHHHHHHHHHHHCC--CEEEEEEcCC
Confidence            457888899999999999999    333321                  147999999999999  9999998754


No 76 
>2c1l_A Restriction endonuclease; BFII, domain fusion, hydrolase; HET: TAR TLA SRT MES; 1.9A {Bacillus firmus}
Probab=23.58  E-value=1.4e+02  Score=29.64  Aligned_cols=80  Identities=16%  Similarity=0.171  Sum_probs=54.7

Q ss_pred             CcchHHHHHHHHhhcCCeEEEEEecCccccccccccCccCCChHHHHhhhcCCCcEEEecCCCCCCCCCccccccccccc
Q 006078          243 GDIMLGELLKKKASEGVRVCMLVWDDRTSVSLLKKDGLMATHDEETEKFFQGTDVHCILCPRNPDDGGSFIQDIQISAMF  322 (662)
Q Consensus       243 ~~~~l~~lL~~kA~~GV~VrvLlwd~~~s~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~r~p~~~~~~~~~~~~~~~~  322 (662)
                      .+.+|-+...+..++|++|.+++ -+..+..+.         .++..+.+...||++.++.|.                .
T Consensus        49 Ggvrfy~~f~~h~~~Ggkv~~Il-GgstsQrlT---------SKQavEElL~cGvev~IiNrk----------------R  102 (358)
T 2c1l_A           49 GGVRFYETFTEHINQGGRVIAIL-GGSTSQRLS---------SRQVVEELLNRGVEVHIINRK----------------R  102 (358)
T ss_dssp             GTTTTHHHHHHHHHTTCEEEEEE-ECCSSSCCB---------BHHHHHHHHHTTCEEEEEECS----------------S
T ss_pred             CceeecHHHHHHHhcCCcEEEEE-ccccccccc---------HHHHHHHHHhcCCceEEeeee----------------e
Confidence            46789999999999999999997 433333221         257777888889999887642                2


Q ss_pred             CCccceEEEcCCCCCCCccccceeEEeccccCcC
Q 006078          323 THHQKIVVVDSPMPNGDPERRRIMSFVGGIDLCD  356 (662)
Q Consensus       323 ~hHqK~vVID~~~~~~~~~~~~~vafvGG~nl~~  356 (662)
                      --|-|+-.--....        ..-.||+-|++.
T Consensus       103 i~HaK~Yg~~~n~g--------~~LIV~SgNfT~  128 (358)
T 2c1l_A          103 ILHAKLYGTSNNLG--------ESLVVSSGNFTG  128 (358)
T ss_dssp             CBCCEEEEEEETTE--------EEEEEESCCBST
T ss_pred             ecchhhhcccCCCc--------eEEEEecCCccc
Confidence            45778777655411        144577777755


No 77 
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=22.89  E-value=1.1e+02  Score=26.04  Aligned_cols=46  Identities=13%  Similarity=0.342  Sum_probs=33.5

Q ss_pred             chHHHHHHHHhhcCCeEEEEEecCccccccccccCccCCChHHHHhhhcCCCcEEEec
Q 006078          245 IMLGELLKKKASEGVRVCMLVWDDRTSVSLLKKDGLMATHDEETEKFFQGTDVHCILC  302 (662)
Q Consensus       245 ~~l~~lL~~kA~~GV~VrvLlwd~~~s~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~  302 (662)
                      .-+.+.+..+.++||.|.++ |+....-           ...+..+.|+..||.+..+
T Consensus        90 ewikdfieeakergvevfvv-ynnkddd-----------rrkeaqqefrsdgvdvrtv  135 (162)
T 2l82_A           90 EWIKDFIEEAKERGVEVFVV-YNNKDDD-----------RRKEAQQEFRSDGVDVRTV  135 (162)
T ss_dssp             HHHHHHHHHHHHTTCEEEEE-EECSCHH-----------HHHHHHHHHCCSSCEEEEE
T ss_pred             HHHHHHHHHHHhcCcEEEEE-ecCCCch-----------hHHHHHHHhhhcCceeeec
Confidence            46888888999999999998 7764221           0135667788889888754


No 78 
>2qzq_A Axin interactor, dorsalization associated protein; beta sheet sandwich, coiled coil, signaling protein, lipid binding protein; 1.90A {Danio rerio} PDB: 2qz5_A
Probab=21.57  E-value=4.5e+02  Score=23.75  Aligned_cols=74  Identities=19%  Similarity=0.258  Sum_probs=48.5

Q ss_pred             CCCcEEEEEEC---Cee---eeeeeee-cCCCCCCeeeeEEEEec--cC--CCceEEEEEEecCCCCC--ceeEEEEeee
Q 006078           40 GSELYATIDLE---KAR---VGRTRML-KKEQSNPRWYESFHIYC--AH--MASNIIFTVKDDNPIGA--TLIGRAYVPV  106 (662)
Q Consensus        40 ~~DPYv~v~l~---~~~---~~kT~vi-~~~t~nP~WNE~F~~~v--~~--~~~~L~~~V~D~d~~~~--~~IG~~~ipl  106 (662)
                      -.|||++|++-   +..   ...|.+- ..++..=.||.+.+++.  ++  ..+.+.|+++++..-..  ...+.+.+++
T Consensus        31 ~~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~yv~f~~~v~lqtple~lp~G~aivfElkH~k~kkkk~S~kCw~f~~~  110 (152)
T 2qzq_A           31 CIDPYITVSVKDLNGIDLNPVQDTPVATRKEDTYIHFSVDVEIQRHLEKLPKGAAIFFEFKHYKPKKRFTSTKCFAFMEM  110 (152)
T ss_dssp             CEEEEEEEEEECTTSCBSSCCEECCCCCEECSSEEEEEEEEECSSCGGGSCTTCEEEEEEEEEETTTTEEEEEEEEEEEG
T ss_pred             ccCCeEEEEEEcCCCCCccccccCCCcceecCCeEEEeeEEEeeCcHHHCCCCcEEEEEEEEecccceeeeeeeEEEEEh
Confidence            37999999992   211   2245544 12244457777777643  22  23678999998766543  5888899999


Q ss_pred             eeecCCc
Q 006078          107 EEVLGGE  113 (662)
Q Consensus       107 ~~l~~g~  113 (662)
                      +++.+|.
T Consensus       111 d~i~~g~  117 (152)
T 2qzq_A          111 DEIKPGP  117 (152)
T ss_dssp             GGCCSEE
T ss_pred             hhcccCc
Confidence            9998864


Done!