BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006083
(662 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 266 bits (679), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 140/294 (47%), Positives = 196/294 (66%), Gaps = 11/294 (3%)
Query: 306 FTYDELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQG-EREFSAEVE 364
F+ EL A+ F+ N+LG+GGFG V+KG L +G VAVK LK QG E +F EVE
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 365 IISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG--ENRPVMDFATRVRIALG 422
+IS HR+L+ L G+C+ +R+LVY +++N ++ L E++P +D+ R RIALG
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 147
Query: 423 SAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTF 482
SA+GLAYLH+ C P+IIHRD+KAANIL+D+ FEA+V DFGLAKL + HV V GT
Sbjct: 148 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTI 207
Query: 483 GYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDS----LVEWARPLLGAA 538
G++APEY S+GK +EK+DVF +GVMLLELITG+R D+ + + L++W + L
Sbjct: 208 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL---- 263
Query: 539 LEDGIYDGLVDPRLEHNYVPHEMARLVACGAASIRHSARKRPKMSQIVRALEGD 592
L++ + LVD L+ NY E+ +L+ + S +RPKMS++VR LEGD
Sbjct: 264 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/294 (47%), Positives = 194/294 (65%), Gaps = 11/294 (3%)
Query: 306 FTYDELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQG-EREFSAEVE 364
F+ EL A+ F N+LG+GGFG V+KG L +G VAVK LK QG E +F EVE
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 365 IISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG--ENRPVMDFATRVRIALG 422
+IS HR+L+ L G+C+ +R+LVY +++N ++ L E++P +D+ R RIALG
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139
Query: 423 SAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTF 482
SA+GLAYLH+ C P+IIHRD+KAANIL+D+ FEA+V DFGLAKL + HV V G
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXI 199
Query: 483 GYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDS----LVEWARPLLGAA 538
G++APEY S+GK +EK+DVF +GVMLLELITG+R D+ + + L++W + L
Sbjct: 200 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL---- 255
Query: 539 LEDGIYDGLVDPRLEHNYVPHEMARLVACGAASIRHSARKRPKMSQIVRALEGD 592
L++ + LVD L+ NY E+ +L+ + S +RPKMS++VR LEGD
Sbjct: 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 164/286 (57%), Gaps = 12/286 (4%)
Query: 310 ELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRV 369
+L AT F L+G G FG V+KGVL +G +VA+K S QG EF E+E +S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 370 HHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFA--TRVRIALGSAKGL 427
H HLVSL+G+C + +L+Y+++ N L+ HL+G + P M + R+ I +G+A+GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSND-NHTHVSTRVMGTFGYLA 486
YLH IIHRD+K+ NIL+D+NF + DFG++K + + TH+ V GT GY+
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 487 PEYASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMED--SLVEWARPLLGAALEDGIY 544
PEY G+LTEKSDV+SFGV+L E++ R + ++ + +L EWA + +G
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA----VESHNNGQL 265
Query: 545 DGLVDPRLEHNYVPHEMARLVACGAASIRHSARKRPKMSQIVRALE 590
+ +VDP L P + + + S+ RP M ++ LE
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 163/286 (56%), Gaps = 12/286 (4%)
Query: 310 ELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRV 369
+L AT F L+G G FG V+KGVL +G +VA+K S QG EF E+E +S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 370 HHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFA--TRVRIALGSAKGL 427
H HLVSL+G+C + +L+Y+++ N L+ HL+G + P M + R+ I +G+A+GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSND-NHTHVSTRVMGTFGYLA 486
YLH IIHRD+K+ NIL+D+NF + DFG++K + TH+ V GT GY+
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 487 PEYASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMED--SLVEWARPLLGAALEDGIY 544
PEY G+LTEKSDV+SFGV+L E++ R + ++ + +L EWA + +G
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV----ESHNNGQL 265
Query: 545 DGLVDPRLEHNYVPHEMARLVACGAASIRHSARKRPKMSQIVRALE 590
+ +VDP L P + + + S+ RP M ++ LE
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 138/221 (62%), Gaps = 15/221 (6%)
Query: 305 TFTYDELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSL----KTGSGQGEREFS 360
T +DE + GG N +G+GGFG V+KG + N VAVK L + + +++F
Sbjct: 24 TNNFDERPISVGG----NKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFD 78
Query: 361 AEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG-ENRPVMDFATRVRI 419
E++++++ H +LV L+G+ G LVY ++ N +L L + P + + R +I
Sbjct: 79 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKI 138
Query: 420 ALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSND-NHTHVSTRV 478
A G+A G+ +LHE+ H IHRDIK+ANIL+D+ F A ++DFGLA+ S T + +R+
Sbjct: 139 AQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRI 195
Query: 479 MGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVD 519
+GT Y+APE A G++T KSD++SFGV+LLE+ITG VD
Sbjct: 196 VGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 235
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 137/221 (61%), Gaps = 15/221 (6%)
Query: 305 TFTYDELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSL----KTGSGQGEREFS 360
T +DE + GG N +G+GGFG V+KG + N VAVK L + + +++F
Sbjct: 24 TNNFDERPISVGG----NKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFD 78
Query: 361 AEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG-ENRPVMDFATRVRI 419
E++++++ H +LV L+G+ G LVY ++ N +L L + P + + R +I
Sbjct: 79 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKI 138
Query: 420 ALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSND-NHTHVSTRV 478
A G+A G+ +LHE+ H IHRDIK+ANIL+D+ F A ++DFGLA+ S T + R+
Sbjct: 139 AQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRI 195
Query: 479 MGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVD 519
+GT Y+APE A G++T KSD++SFGV+LLE+ITG VD
Sbjct: 196 VGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 235
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 136/221 (61%), Gaps = 15/221 (6%)
Query: 305 TFTYDELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSL----KTGSGQGEREFS 360
T +DE + GG N +G+GGFG V+KG + N VAVK L + + +++F
Sbjct: 18 TNNFDERPISVGG----NKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFD 72
Query: 361 AEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG-ENRPVMDFATRVRI 419
E++++++ H +LV L+G+ G LVY ++ N +L L + P + + R +I
Sbjct: 73 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKI 132
Query: 420 ALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHV-STRV 478
A G+A G+ +LHE+ H IHRDIK+ANIL+D+ F A ++DFGLA+ S V R+
Sbjct: 133 AQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRI 189
Query: 479 MGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVD 519
+GT Y+APE A G++T KSD++SFGV+LLE+ITG VD
Sbjct: 190 VGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 229
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 133/221 (60%), Gaps = 15/221 (6%)
Query: 305 TFTYDELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSL----KTGSGQGEREFS 360
T +DE + GG N G+GGFG V+KG + N VAVK L + + +++F
Sbjct: 15 TNNFDERPISVGG----NKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFD 69
Query: 361 AEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG-ENRPVMDFATRVRI 419
E+++ ++ H +LV L+G+ G LVY + N +L L + P + + R +I
Sbjct: 70 QEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKI 129
Query: 420 ALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHV-STRV 478
A G+A G+ +LHE+ H IHRDIK+ANIL+D+ F A ++DFGLA+ S V +R+
Sbjct: 130 AQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRI 186
Query: 479 MGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVD 519
+GT Y APE A G++T KSD++SFGV+LLE+ITG VD
Sbjct: 187 VGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 226
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 107/197 (54%), Gaps = 6/197 (3%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGER--EFSAEVEIISRVHHRHLVSLVGYC 381
+G G FG VH+ +G +VAVK L ER EF EV I+ R+ H ++V +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGEN-RPVMDFATRVRIALGSAKGLAYLHEDCHPRIIH 440
+V E++S +L LH R +D R+ +A AKG+ YLH + +P I+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 441 RDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSD 500
RD+K+ N+L+D + V DFGL++L S GT ++APE EKSD
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLX-SKXAAGTPEWMAPEVLRDEPSNEKSD 221
Query: 501 VFSFGVMLLELITGRRP 517
V+SFGV+L EL T ++P
Sbjct: 222 VYSFGVILWELATLQQP 238
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 105/196 (53%), Gaps = 8/196 (4%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LGQG FG V G VA+K+LK G+ E F E +++ ++ H LV L Y +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 331
Query: 384 GGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+ + +V E++S +L L GE + V +A A G+AY+ + +HRD
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 388
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
++AANIL+ +N VADFGLA+L DN + APE A G+ T KSDV+
Sbjct: 389 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 448
Query: 503 SFGVMLLELIT-GRRP 517
SFG++L EL T GR P
Sbjct: 449 SFGILLTELTTKGRVP 464
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 105/196 (53%), Gaps = 8/196 (4%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LGQG FG V G VA+K+LK G+ E F E +++ ++ H LV L Y +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 72
Query: 384 GGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+ + +V E++S +L L GE + V +A A G+AY+ + +HRD
Sbjct: 73 SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 129
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
++AANIL+ +N VADFGLA+L DN + APE A G+ T KSDV+
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 189
Query: 503 SFGVMLLELIT-GRRP 517
SFG++L EL T GR P
Sbjct: 190 SFGILLTELTTKGRVP 205
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 105/196 (53%), Gaps = 8/196 (4%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LGQG FG V G VA+K+LK G+ E F E +++ ++ H LV L Y +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 248
Query: 384 GGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+ + +V E++S +L L GE + V +A A G+AY+ + +HRD
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 305
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
++AANIL+ +N VADFGLA+L DN + APE A G+ T KSDV+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 503 SFGVMLLELIT-GRRP 517
SFG++L EL T GR P
Sbjct: 366 SFGILLTELTTKGRVP 381
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 105/196 (53%), Gaps = 8/196 (4%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LGQG FG V G VA+K+LK G+ E F E +++ ++ H LV L Y +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 75
Query: 384 GGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+ + +V E++S +L L GE + V +A A G+AY+ + +HRD
Sbjct: 76 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 132
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
++AANIL+ +N VADFGLA+L DN + APE A G+ T KSDV+
Sbjct: 133 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 192
Query: 503 SFGVMLLELIT-GRRP 517
SFG++L EL T GR P
Sbjct: 193 SFGILLTELTTKGRVP 208
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 105/196 (53%), Gaps = 8/196 (4%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LGQG FG V G VA+K+LK G+ E F E +++ ++ H LV L Y +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 248
Query: 384 GGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+ + +V E++S +L L GE + V +A A G+AY+ + +HRD
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 305
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
++AANIL+ +N VADFGLA+L DN + APE A G+ T KSDV+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 503 SFGVMLLELIT-GRRP 517
SFG++L EL T GR P
Sbjct: 366 SFGILLTELTTKGRVP 381
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 105/196 (53%), Gaps = 8/196 (4%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LGQG FG V G VA+K+LK G+ E F E +++ ++ H LV L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 384 GGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+ + +V E++S +L L GE + V +A A G+AY+ + +HRD
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 139
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
++AANIL+ +N VADFGLA+L DN + APE A G+ T KSDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 503 SFGVMLLELIT-GRRP 517
SFG++L EL T GR P
Sbjct: 200 SFGILLTELTTKGRVP 215
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 111/198 (56%), Gaps = 8/198 (4%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGER--EFSAEVEIISRVHHRHLVSLVGYC 381
+G G FG VH+ +G +VAVK L ER EF EV I+ R+ H ++V +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGEN-RPVMDFATRVRIALGSAKGLAYLHEDCHPRIIH 440
+V E++S +L LH R +D R+ +A AKG+ YLH + +P I+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 441 RDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTR-VMGTFGYLAPEYASSGKLTEKS 499
R++K+ N+L+D + V DFGL++L T +S++ GT ++APE EKS
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRLKAS--TFLSSKSAAGTPEWMAPEVLRDEPSNEKS 220
Query: 500 DVFSFGVMLLELITGRRP 517
DV+SFGV+L EL T ++P
Sbjct: 221 DVYSFGVILWELATLQQP 238
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 108/197 (54%), Gaps = 6/197 (3%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
+G G FG VH G N +VA+K++K GS E +F E E++ ++ H LV L G C+
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 384 GGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDI 443
LV+EF+ + L +L + R + T + + L +G+AYL E C +IHRD+
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 149
Query: 444 KAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 503
A N L+ +N V+DFG+ + D+ ST + +PE S + + KSDV+S
Sbjct: 150 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 209
Query: 504 FGVMLLELIT-GRRPVD 519
FGV++ E+ + G+ P +
Sbjct: 210 FGVLMWEVFSEGKIPYE 226
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 105/196 (53%), Gaps = 8/196 (4%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LGQG FG V G VA+K+LK G+ E F E +++ ++ H LV L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKIRHEKLVQL--YAVV 82
Query: 384 GGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+ + +V E++S +L L GE + V +A A G+AY+ + +HRD
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 139
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
++AANIL+ +N VADFGLA+L DN + APE A G+ T KSDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 503 SFGVMLLELIT-GRRP 517
SFG++L EL T GR P
Sbjct: 200 SFGILLTELTTKGRVP 215
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 105/196 (53%), Gaps = 8/196 (4%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LGQG FG V G VA+K+LK G+ E F E +++ ++ H LV L Y +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 73
Query: 384 GGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+ + +V E++S +L L GE + V +A A G+AY+ + +HRD
Sbjct: 74 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 130
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
++AANIL+ +N VADFGLA+L DN + APE A G+ T KSDV+
Sbjct: 131 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 503 SFGVMLLELIT-GRRP 517
SFG++L EL T GR P
Sbjct: 191 SFGILLTELTTKGRVP 206
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 105/196 (53%), Gaps = 8/196 (4%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LGQG FG V G VA+K+LK G+ E F E +++ ++ H LV L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 384 GGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+ + +V E++S +L L GE + V +A A G+AY+ + +HRD
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 139
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
++AANIL+ +N VADFGLA+L DN + APE A G+ T KSDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 503 SFGVMLLELIT-GRRP 517
SFG++L EL T GR P
Sbjct: 200 SFGILLTELTTKGRVP 215
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 105/196 (53%), Gaps = 8/196 (4%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LGQG FG V G VA+K+LK G+ E F E +++ ++ H LV L Y +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 71
Query: 384 GGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+ + +V E++S +L L GE + V +A A G+AY+ + +HRD
Sbjct: 72 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 128
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
++AANIL+ +N VADFGLA+L DN + APE A G+ T KSDV+
Sbjct: 129 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 188
Query: 503 SFGVMLLELIT-GRRP 517
SFG++L EL T GR P
Sbjct: 189 SFGILLTELTTKGRVP 204
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 105/196 (53%), Gaps = 8/196 (4%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LGQG FG V G VA+K+LK G+ E F E +++ ++ H LV L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 384 GGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+ + +V E++S +L L GE + V +A A G+AY+ + +HRD
Sbjct: 83 SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 139
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
++AANIL+ +N VADFGLA+L DN + APE A G+ T KSDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 503 SFGVMLLELIT-GRRP 517
SFG++L EL T GR P
Sbjct: 200 SFGILLTELTTKGRVP 215
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 105/196 (53%), Gaps = 8/196 (4%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LGQG FG V G VA+K+LK G+ E F E +++ ++ H LV L Y +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 248
Query: 384 GGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+ + +V E++S +L L GE + V +A A G+AY+ + +HRD
Sbjct: 249 SEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 305
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
++AANIL+ +N VADFGLA+L DN + APE A G+ T KSDV+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 503 SFGVMLLELIT-GRRP 517
SFG++L EL T GR P
Sbjct: 366 SFGILLTELTTKGRVP 381
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 105/196 (53%), Gaps = 8/196 (4%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LGQG FG V G VA+K+LK G+ E F E +++ ++ H LV L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 384 GGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+ + +V E++S +L L GE + V +A A G+AY+ + +HRD
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 139
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
++AANIL+ +N VADFGLA+L DN + APE A G+ T KSDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 503 SFGVMLLELIT-GRRP 517
SFG++L EL T GR P
Sbjct: 200 SFGILLTELTTKGRVP 215
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 104/196 (53%), Gaps = 8/196 (4%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LGQG FG V G VA+K+LK G+ E F E +++ ++ H LV L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 384 GGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+ + +V E++S L L GE + V +A A G+AY+ + +HRD
Sbjct: 83 SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 139
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
++AANIL+ +N VADFGLA+L DN + APE A G+ T KSDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 503 SFGVMLLELIT-GRRP 517
SFG++L EL T GR P
Sbjct: 200 SFGILLTELTTKGRVP 215
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 108/197 (54%), Gaps = 6/197 (3%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
+G G FG VH G N +VA+K+++ G+ E +F E E++ ++ H LV L G C+
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 384 GGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDI 443
LV+EF+ + L +L + R + T + + L +G+AYL E C +IHRD+
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 132
Query: 444 KAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 503
A N L+ +N V+DFG+ + D+ ST + +PE S + + KSDV+S
Sbjct: 133 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 192
Query: 504 FGVMLLELIT-GRRPVD 519
FGV++ E+ + G+ P +
Sbjct: 193 FGVLMWEVFSEGKIPYE 209
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 104/196 (53%), Gaps = 8/196 (4%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LGQG FG V G VA+K+LK G+ E F E +++ ++ H LV L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 384 GGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+ + +V E++S L L GE + V +A A G+AY+ + +HRD
Sbjct: 83 SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 139
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
++AANIL+ +N VADFGLA+L DN + APE A G+ T KSDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 503 SFGVMLLELIT-GRRP 517
SFG++L EL T GR P
Sbjct: 200 SFGILLTELTTKGRVP 215
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 108/197 (54%), Gaps = 6/197 (3%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
+G G FG VH G N +VA+K+++ G+ E +F E E++ ++ H LV L G C+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 384 GGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDI 443
LV+EF+ + L +L + R + T + + L +G+AYL E C +IHRD+
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 129
Query: 444 KAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 503
A N L+ +N V+DFG+ + D+ ST + +PE S + + KSDV+S
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 504 FGVMLLELIT-GRRPVD 519
FGV++ E+ + G+ P +
Sbjct: 190 FGVLMWEVFSEGKIPYE 206
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 108/197 (54%), Gaps = 6/197 (3%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
+G G FG VH G N +VA+K+++ G+ E +F E E++ ++ H LV L G C+
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 384 GGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDI 443
LV+EF+ + L +L + R + T + + L +G+AYL E C +IHRD+
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 127
Query: 444 KAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 503
A N L+ +N V+DFG+ + D+ ST + +PE S + + KSDV+S
Sbjct: 128 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 187
Query: 504 FGVMLLELIT-GRRPVD 519
FGV++ E+ + G+ P +
Sbjct: 188 FGVLMWEVFSEGKIPYE 204
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 105/196 (53%), Gaps = 8/196 (4%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LGQG FG V G VA+K+LK G+ E F E +++ ++ H LV L Y +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 79
Query: 384 GGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+ + +V E+++ +L L GE + V ++ A G+AY+ + +HRD
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY---VHRD 136
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
++AANIL+ +N VADFGLA+L DN + APE A G+ T KSDV+
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 503 SFGVMLLELIT-GRRP 517
SFG++L EL T GR P
Sbjct: 197 SFGILLTELTTKGRVP 212
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 104/196 (53%), Gaps = 8/196 (4%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LGQG FG V G VA+K+LK G+ E F E +++ ++ H LV L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 384 GGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+ + +V E++S +L L GE + V +A A G+AY+ + +HRD
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 139
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
+ AANIL+ +N VADFGLA+L DN + APE A G+ T KSDV+
Sbjct: 140 LAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 503 SFGVMLLELIT-GRRP 517
SFG++L EL T GR P
Sbjct: 200 SFGILLTELTTKGRVP 215
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 105/196 (53%), Gaps = 8/196 (4%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LGQG FG V G VA+K+LK G+ E F E +++ ++ H LV L Y +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 79
Query: 384 GGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+ + +V E+++ +L L GE + V ++ A G+AY+ + +HRD
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY---VHRD 136
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
++AANIL+ +N VADFGLA+L DN + APE A G+ T KSDV+
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 503 SFGVMLLELIT-GRRP 517
SFG++L EL T GR P
Sbjct: 197 SFGILLTELTTKGRVP 212
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 104/196 (53%), Gaps = 8/196 (4%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LGQG FG V G VA+K+LK G+ E F E +++ ++ H LV L Y +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 249
Query: 384 GGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+ + +V E++S +L L GE + V +A A G+AY+ + +HRD
Sbjct: 250 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 306
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
++AANIL+ +N VADFGL +L DN + APE A G+ T KSDV+
Sbjct: 307 LRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 366
Query: 503 SFGVMLLELIT-GRRP 517
SFG++L EL T GR P
Sbjct: 367 SFGILLTELTTKGRVP 382
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 107/197 (54%), Gaps = 6/197 (3%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
+G G FG VH G N +VA+K+++ G+ E +F E E++ ++ H LV L G C+
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 384 GGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDI 443
LV EF+ + L +L + R + T + + L +G+AYL E C +IHRD+
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 130
Query: 444 KAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 503
A N L+ +N V+DFG+ + D+ ST + +PE S + + KSDV+S
Sbjct: 131 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 190
Query: 504 FGVMLLELIT-GRRPVD 519
FGV++ E+ + G+ P +
Sbjct: 191 FGVLMWEVFSEGKIPYE 207
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 121/211 (57%), Gaps = 23/211 (10%)
Query: 324 LGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQGE-------REFSAEVEIISRVHHRHLV 375
+G+GGFG VHKG L K V A+KSL G +GE +EF EV I+S ++H ++V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
L G + RM V EFV L + L + P+ ++ ++R+ L A G+ Y+ ++ +
Sbjct: 87 KLYG-LMHNPPRM-VMEFVPCGDLYHRLLDKAHPI-KWSVKLRLMLDIALGIEYM-QNQN 142
Query: 436 PRIIHRDIKAANILI---DDN--FEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY- 489
P I+HRD+++ NI + D+N A VADFGL++ S H + ++G F ++APE
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS----VHSVSGLLGNFQWMAPETI 198
Query: 490 -ASSGKLTEKSDVFSFGVMLLELITGRRPVD 519
A TEK+D +SF ++L ++TG P D
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 107/197 (54%), Gaps = 6/197 (3%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
+G G FG VH G N +VA+K+++ G+ E +F E E++ ++ H LV L G C+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 384 GGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDI 443
LV+EF+ + L +L + R + T + + L +G+AYL E +IHRD+
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEE---ASVIHRDL 129
Query: 444 KAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 503
A N L+ +N V+DFG+ + D+ ST + +PE S + + KSDV+S
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 504 FGVMLLELIT-GRRPVD 519
FGV++ E+ + G+ P +
Sbjct: 190 FGVLMWEVFSEGKIPYE 206
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 120/211 (56%), Gaps = 23/211 (10%)
Query: 324 LGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQGE-------REFSAEVEIISRVHHRHLV 375
+G+GGFG VHKG L K V A+KSL G +GE +EF EV I+S ++H ++V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
L G + RM V EFV L + L + P+ ++ ++R+ L A G+ Y+ ++ +
Sbjct: 87 KLYG-LMHNPPRM-VMEFVPCGDLYHRLLDKAHPI-KWSVKLRLMLDIALGIEYM-QNQN 142
Query: 436 PRIIHRDIKAANILI---DDN--FEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY- 489
P I+HRD+++ NI + D+N A VADF L++ S H + ++G F ++APE
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS----VHSVSGLLGNFQWMAPETI 198
Query: 490 -ASSGKLTEKSDVFSFGVMLLELITGRRPVD 519
A TEK+D +SF ++L ++TG P D
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 108/211 (51%), Gaps = 8/211 (3%)
Query: 309 DELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISR 368
DE LG G FG V G +VAVKSLK GS + F AE ++ +
Sbjct: 14 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQ 72
Query: 369 VHHRHLVSLVGYCIAGGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGL 427
+ H+ LV L Y + + + ++ E++ N +L L + + + +A A+G+
Sbjct: 73 LQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 130
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAP 487
A++ E + IHRD++AANIL+ D +ADFGLA+L DN + AP
Sbjct: 131 AFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 187
Query: 488 EYASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
E + G T KSDV+SFG++L E++T GR P
Sbjct: 188 EAINYGTFTIKSDVWSFGILLTEIVTHGRIP 218
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 108/211 (51%), Gaps = 8/211 (3%)
Query: 309 DELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISR 368
DE LG G FG V G +VAVKSLK GS + F AE ++ +
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQ 70
Query: 369 VHHRHLVSLVGYCIAGGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGL 427
+ H+ LV L Y + + + ++ E++ N +L L + + + +A A+G+
Sbjct: 71 LQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 128
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAP 487
A++ E + IHRD++AANIL+ D +ADFGLA+L DN + AP
Sbjct: 129 AFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 185
Query: 488 EYASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
E + G T KSDV+SFG++L E++T GR P
Sbjct: 186 EAINYGTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 120/211 (56%), Gaps = 23/211 (10%)
Query: 324 LGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQGE-------REFSAEVEIISRVHHRHLV 375
+G+GGFG VHKG L K V A+KSL G +GE +EF EV I+S ++H ++V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
L G + RM V EFV L + L + P+ ++ ++R+ L A G+ Y+ ++ +
Sbjct: 87 KLYG-LMHNPPRM-VMEFVPCGDLYHRLLDKAHPI-KWSVKLRLMLDIALGIEYM-QNQN 142
Query: 436 PRIIHRDIKAANILI---DDN--FEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY- 489
P I+HRD+++ NI + D+N A VADFG ++ S H + ++G F ++APE
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQS----VHSVSGLLGNFQWMAPETI 198
Query: 490 -ASSGKLTEKSDVFSFGVMLLELITGRRPVD 519
A TEK+D +SF ++L ++TG P D
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 108/211 (51%), Gaps = 8/211 (3%)
Query: 309 DELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISR 368
DE LG G FG V G +VAVKSLK GS + F AE ++ +
Sbjct: 15 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQ 73
Query: 369 VHHRHLVSLVGYCIAGGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGL 427
+ H+ LV L Y + + + ++ E++ N +L L + + + +A A+G+
Sbjct: 74 LQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 131
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAP 487
A++ E + IHRD++AANIL+ D +ADFGLA+L DN + AP
Sbjct: 132 AFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 188
Query: 488 EYASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
E + G T KSDV+SFG++L E++T GR P
Sbjct: 189 EAINYGTFTIKSDVWSFGILLTEIVTHGRIP 219
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 106/196 (54%), Gaps = 8/196 (4%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LG G FG V G +VAVKSLK GS + F AE ++ ++ H+ LV L Y +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAVV 79
Query: 384 GGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+ + ++ E++ N +L L + + + +A A+G+A++ E + IHRD
Sbjct: 80 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRD 136
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
++AANIL+ D +ADFGLA+L DN + APE + G T KSDV+
Sbjct: 137 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 196
Query: 503 SFGVMLLELIT-GRRP 517
SFG++L E++T GR P
Sbjct: 197 SFGILLTEIVTHGRIP 212
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 108/211 (51%), Gaps = 8/211 (3%)
Query: 309 DELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISR 368
DE LG G FG V G +VAVKSLK GS + F AE ++ +
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQ 64
Query: 369 VHHRHLVSLVGYCIAGGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGL 427
+ H+ LV L Y + + + ++ E++ N +L L + + + +A A+G+
Sbjct: 65 LQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAP 487
A++ E + IHRD++AANIL+ D +ADFGLA+L DN + AP
Sbjct: 123 AFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 179
Query: 488 EYASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
E + G T KSDV+SFG++L E++T GR P
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 106/196 (54%), Gaps = 8/196 (4%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LG G FG V G +VAVKSLK GS + F AE ++ ++ H+ LV L Y +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAVV 77
Query: 384 GGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+ + ++ E++ N +L L + + + +A A+G+A++ E + IHRD
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRD 134
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
++AANIL+ D +ADFGLA+L DN + APE + G T KSDV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 503 SFGVMLLELIT-GRRP 517
SFG++L E++T GR P
Sbjct: 195 SFGILLTEIVTHGRIP 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 106/196 (54%), Gaps = 8/196 (4%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LG G FG V G +VAVKSLK GS + F AE ++ ++ H+ LV L Y +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAVV 78
Query: 384 GGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+ + ++ E++ N +L L + + + +A A+G+A++ E + IHRD
Sbjct: 79 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRD 135
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
++AANIL+ D +ADFGLA+L DN + APE + G T KSDV+
Sbjct: 136 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 195
Query: 503 SFGVMLLELIT-GRRP 517
SFG++L E++T GR P
Sbjct: 196 SFGILLTEIVTHGRIP 211
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 108/211 (51%), Gaps = 8/211 (3%)
Query: 309 DELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISR 368
DE LG G FG V G +VAVKSLK GS + F AE ++ +
Sbjct: 16 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQ 74
Query: 369 VHHRHLVSLVGYCIAGGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGL 427
+ H+ LV L Y + + + ++ E++ N +L L + + + +A A+G+
Sbjct: 75 LQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 132
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAP 487
A++ E + IHRD++AANIL+ D +ADFGLA+L DN + AP
Sbjct: 133 AFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 189
Query: 488 EYASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
E + G T KSDV+SFG++L E++T GR P
Sbjct: 190 EAINYGTFTIKSDVWSFGILLTEIVTHGRIP 220
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 108/211 (51%), Gaps = 8/211 (3%)
Query: 309 DELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISR 368
DE LG G FG V G +VAVKSLK GS + F AE ++ +
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQ 70
Query: 369 VHHRHLVSLVGYCIAGGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGL 427
+ H+ LV L Y + + + ++ E++ N +L L + + + +A A+G+
Sbjct: 71 LQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 128
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAP 487
A++ E + IHRD++AANIL+ D +ADFGLA+L DN + AP
Sbjct: 129 AFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 185
Query: 488 EYASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
E + G T KSDV+SFG++L E++T GR P
Sbjct: 186 EAINYGTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 108/211 (51%), Gaps = 8/211 (3%)
Query: 309 DELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISR 368
DE LG G FG V G +VAVKSLK GS + F AE ++ +
Sbjct: 11 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQ 69
Query: 369 VHHRHLVSLVGYCIAGGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGL 427
+ H+ LV L Y + + + ++ E++ N +L L + + + +A A+G+
Sbjct: 70 LQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 127
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAP 487
A++ E + IHRD++AANIL+ D +ADFGLA+L DN + AP
Sbjct: 128 AFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 184
Query: 488 EYASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
E + G T KSDV+SFG++L E++T GR P
Sbjct: 185 EAINYGTFTIKSDVWSFGILLTEIVTHGRIP 215
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 103/197 (52%), Gaps = 10/197 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LG G FG V G +VA+K+LK G+ E F E +I+ ++ H LV L Y +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPE-SFLEEAQIMKKLKHDKLVQL--YAVV 73
Query: 384 GGQRMLVYEFVSNK--TLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHR 441
+ + + NK L++ GE R + V +A A G+AY+ + IHR
Sbjct: 74 SEEPIYIVTEYMNKGSLLDFLKDGEGR-ALKLPNLVDMAAQVAAGMAYIERMNY---IHR 129
Query: 442 DIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDV 501
D+++ANIL+ + +ADFGLA+L DN + APE A G+ T KSDV
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 502 FSFGVMLLELIT-GRRP 517
+SFG++L EL+T GR P
Sbjct: 190 WSFGILLTELVTKGRVP 206
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 106/196 (54%), Gaps = 8/196 (4%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LG G FG V G +VAVKSLK GS + F AE ++ ++ H+ LV L Y +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAVV 77
Query: 384 GGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+ + ++ E++ N +L L + + + +A A+G+A++ E + IHRD
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRD 134
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
++AANIL+ D +ADFGLA+L DN + APE + G T KSDV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 503 SFGVMLLELIT-GRRP 517
SFG++L E++T GR P
Sbjct: 195 SFGILLTEIVTHGRIP 210
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 106/196 (54%), Gaps = 8/196 (4%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LG G FG V G +VAVKSLK GS + F AE ++ ++ H+ LV L Y +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAVV 72
Query: 384 GGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+ + ++ E++ N +L L + + + +A A+G+A++ E + IHRD
Sbjct: 73 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRD 129
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
++AANIL+ D +ADFGLA+L DN + APE + G T KSDV+
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 189
Query: 503 SFGVMLLELIT-GRRP 517
SFG++L E++T GR P
Sbjct: 190 SFGILLTEIVTHGRIP 205
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 134/270 (49%), Gaps = 27/270 (10%)
Query: 322 NLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYC 381
++G+G FG V K K+VA+K +++ S + + F E+ +SRV+H ++V L G C
Sbjct: 15 EVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHG-ENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIH 440
+ LV E+ +L LHG E P A + L ++G+AYLH +IH
Sbjct: 72 L--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 129
Query: 441 RDIKAANILIDDNFEAM-VADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKS 499
RD+K N+L+ + + DFG A D TH+ T G+ ++APE +EK
Sbjct: 130 RDLKPPNLLLVAGGTVLKICDFGTA---CDIQTHM-TNNKGSAAWMAPEVFEGSNYSEKC 185
Query: 500 DVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDGLVDPRLEHNYVPH 559
DVFS+G++L E+IT R+P D + WA +++G P +++ P
Sbjct: 186 DVFSWGIILWEVITRRKPFDEIGGPAFRIMWA-----------VHNGTRPPLIKNLPKPI 234
Query: 560 EMARLVACGAASIRHSARKRPKMSQIVRAL 589
E + + C + +RP M +IV+ +
Sbjct: 235 E-SLMTRCWS----KDPSQRPSMEEIVKIM 259
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 134/270 (49%), Gaps = 27/270 (10%)
Query: 322 NLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYC 381
++G+G FG V K K+VA+K +++ S + + F E+ +SRV+H ++V L G C
Sbjct: 14 EVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHG-ENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIH 440
+ LV E+ +L LHG E P A + L ++G+AYLH +IH
Sbjct: 71 L--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 128
Query: 441 RDIKAANILIDDNFEAM-VADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKS 499
RD+K N+L+ + + DFG A D TH+ T G+ ++APE +EK
Sbjct: 129 RDLKPPNLLLVAGGTVLKICDFGTA---CDIQTHM-TNNKGSAAWMAPEVFEGSNYSEKC 184
Query: 500 DVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDGLVDPRLEHNYVPH 559
DVFS+G++L E+IT R+P D + WA +++G P +++ P
Sbjct: 185 DVFSWGIILWEVITRRKPFDEIGGPAFRIMWA-----------VHNGTRPPLIKNLPKPI 233
Query: 560 EMARLVACGAASIRHSARKRPKMSQIVRAL 589
E + + C + +RP M +IV+ +
Sbjct: 234 E-SLMTRCWS----KDPSQRPSMEEIVKIM 258
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 106/196 (54%), Gaps = 8/196 (4%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LG G FG V G +VAVKSLK GS + F AE ++ ++ H+ LV L Y +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAVV 73
Query: 384 GGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+ + ++ E++ N +L L + + + +A A+G+A++ E + IHR+
Sbjct: 74 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRN 130
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
++AANIL+ D +ADFGLA+L DN + APE + G T KSDV+
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 190
Query: 503 SFGVMLLELIT-GRRP 517
SFG++L E++T GR P
Sbjct: 191 SFGILLTEIVTHGRIP 206
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 104/196 (53%), Gaps = 8/196 (4%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LG G G V G +VAVKSLK GS + F AE ++ ++ H+ LV L Y +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAVV 77
Query: 384 GGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+ + ++ E++ N +L L + + + +A A+G+A++ E + IHRD
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRD 134
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
++AANIL+ D +ADFGLA+L D + APE + G T KSDV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 503 SFGVMLLELIT-GRRP 517
SFG++L E++T GR P
Sbjct: 195 SFGILLTEIVTHGRIP 210
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 137/288 (47%), Gaps = 26/288 (9%)
Query: 309 DELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISR 368
D+ G +G G FG V+KG V + ++ + Q + F EV ++ +
Sbjct: 17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 76
Query: 369 VHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLA 428
H +++ +GY A Q +V ++ +L +HLH + + IA +A+G+
Sbjct: 77 TRHVNILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMD 134
Query: 429 YLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAP 487
YLH IIHRD+K+ NI + ++ + DFGLA + S + +H ++ G+ ++AP
Sbjct: 135 YLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 191
Query: 488 E---YASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIY 544
E S + +SDV++FG++L EL+TG+ P D ++E ++G
Sbjct: 192 EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIE----MVGR------- 240
Query: 545 DGLVDPRLE--HNYVPHEMARLVACGAASIRHSARKRPKMSQIVRALE 590
G + P L + P M RL+ A ++ +RP +I+ +E
Sbjct: 241 -GSLSPDLSKVRSNCPKRMKRLM---AECLKKKRDERPSFPRILAEIE 284
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 25/210 (11%)
Query: 323 LLGQGGFGYVHKGVLPNGKEVAVKSLK----TGSGQGEREFSAEVEIISRVHHRHLVSLV 378
++G GGFG V++ G EVAVK+ + Q E ++ + + H ++++L
Sbjct: 14 IIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 379 GYCIAGGQRMLVYEFVSNKTLEYHLHGENRP---VMDFATRVRIALGSAKGLAYLHEDCH 435
G C+ LV EF L L G+ P ++++A ++ A+G+ YLH++
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI------ARGMNYLHDEAI 126
Query: 436 PRIIHRDIKAANILIDDNFE--------AMVADFGLAKLSNDNHTHVSTRVMGTFGYLAP 487
IIHRD+K++NILI E + DFGLA+ + H G + ++AP
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR---EWHRTTKMSAAGAYAWMAP 183
Query: 488 EYASSGKLTEKSDVFSFGVMLLELITGRRP 517
E + ++ SDV+S+GV+L EL+TG P
Sbjct: 184 EVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 146/305 (47%), Gaps = 43/305 (14%)
Query: 306 FTYDELAAATGGFAKS---------NLLGQGGFGYVHKG--VLPNGKE--VAVKSLKTGS 352
FT+++ A FAK ++G G FG V G LP +E VA+K+LK+G
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 353 GQGER-EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVM 411
+ +R +F +E I+ + H +++ L G M++ EF+ N +L+ L +N
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR-QNDGQF 132
Query: 412 DFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDN 470
V + G A G+ YL + + +HRD+ A NIL++ N V+DFGL++ L +D
Sbjct: 133 TVIQLVGMLRGIAAGMKYLADMNY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 189
Query: 471 HTHVSTRVMG---TFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPV-DMTMMED 525
T +G + APE K T SDV+S+G+++ E+++ G RP DMT +
Sbjct: 190 SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD- 248
Query: 526 SLVEWARPLLGAALEDGIYDGLVDPRLEHNYVPHEMARLVACGAASIRHSARKRPKMSQI 585
+ A+E D + P ++ H++ ++ C H RPK QI
Sbjct: 249 ---------VINAIEQ---DYRLPPPMDCPSALHQL--MLDCWQKDRNH----RPKFGQI 290
Query: 586 VRALE 590
V L+
Sbjct: 291 VNTLD 295
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 136/288 (47%), Gaps = 26/288 (9%)
Query: 309 DELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISR 368
D+ G +G G FG V+KG V + ++ + Q + F EV ++ +
Sbjct: 5 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 64
Query: 369 VHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLA 428
H +++ +GY Q +V ++ +L +HLH + + IA +A+G+
Sbjct: 65 TRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMD 122
Query: 429 YLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL-SNDNHTHVSTRVMGTFGYLAP 487
YLH IIHRD+K+ NI + ++ + DFGLA + S + +H ++ G+ ++AP
Sbjct: 123 YLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 179
Query: 488 E---YASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIY 544
E S + +SDV++FG++L EL+TG+ P D ++E ++G
Sbjct: 180 EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIE----MVGR------- 228
Query: 545 DGLVDPRLE--HNYVPHEMARLVACGAASIRHSARKRPKMSQIVRALE 590
G + P L + P M RL+ A ++ +RP +I+ +E
Sbjct: 229 -GSLSPDLSKVRSNCPKRMKRLM---AECLKKKRDERPSFPRILAEIE 272
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 106/201 (52%), Gaps = 18/201 (8%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LG G FG V +VAVK++K GS E F AE ++ + H LV L +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHA-VVT 80
Query: 384 GGQRMLVYEFVSNKTLEYHL---HGENRPV---MDFATRVRIALGSAKGLAYLHEDCHPR 437
++ EF++ +L L G +P+ +DF+ ++ A+G+A++ + +
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAFIEQRNY-- 132
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
IHRD++AANIL+ + +ADFGLA++ DN + APE + G T
Sbjct: 133 -IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTI 191
Query: 498 KSDVFSFGVMLLELIT-GRRP 517
KSDV+SFG++L+E++T GR P
Sbjct: 192 KSDVWSFGILLMEIVTYGRIP 212
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 136/288 (47%), Gaps = 26/288 (9%)
Query: 309 DELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISR 368
D+ G +G G FG V+KG V + ++ + Q + F EV ++ +
Sbjct: 17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 76
Query: 369 VHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLA 428
H +++ +GY Q +V ++ +L +HLH + + IA +A+G+
Sbjct: 77 TRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMD 134
Query: 429 YLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAP 487
YLH IIHRD+K+ NI + ++ + DFGLA + S + +H ++ G+ ++AP
Sbjct: 135 YLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 191
Query: 488 E---YASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIY 544
E S + +SDV++FG++L EL+TG+ P D ++E ++G
Sbjct: 192 EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIE----MVGR------- 240
Query: 545 DGLVDPRLE--HNYVPHEMARLVACGAASIRHSARKRPKMSQIVRALE 590
G + P L + P M RL+ A ++ +RP +I+ +E
Sbjct: 241 -GSLSPDLSKVRSNCPKRMKRLM---AECLKKKRDERPSFPRILAEIE 284
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 106/201 (52%), Gaps = 18/201 (8%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LG G FG V +VAVK++K GS E F AE ++ + H LV L +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHA-VVT 253
Query: 384 GGQRMLVYEFVSNKTLEYHL---HGENRPV---MDFATRVRIALGSAKGLAYLHEDCHPR 437
++ EF++ +L L G +P+ +DF+ ++ A+G+A++ + +
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAFIEQRNY-- 305
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
IHRD++AANIL+ + +ADFGLA++ DN + APE + G T
Sbjct: 306 -IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTI 364
Query: 498 KSDVFSFGVMLLELIT-GRRP 517
KSDV+SFG++L+E++T GR P
Sbjct: 365 KSDVWSFGILLMEIVTYGRIP 385
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 17/201 (8%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LG G FG V G N +VAVK+LK G+ + F E ++ + H LV L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 384 GGQRMLVYEFVSNKTLEYHLHGEN------RPVMDFATRVRIALGSAKGLAYLHEDCHPR 437
++ EF++ +L L + ++DF+ ++ A+G+AY+ +
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI------AEGMAYIERKNY-- 130
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
IHRD++AAN+L+ ++ +ADFGLA++ DN + APE + G T
Sbjct: 131 -IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTI 189
Query: 498 KSDVFSFGVMLLELIT-GRRP 517
KS+V+SFG++L E++T G+ P
Sbjct: 190 KSNVWSFGILLYEIVTYGKIP 210
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 17/201 (8%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LG G FG V G N +VAVK+LK G+ + F E ++ + H LV L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 384 GGQRMLVYEFVSNKTLEYHLHGEN------RPVMDFATRVRIALGSAKGLAYLHEDCHPR 437
++ E+++ +L L + ++DF+ ++ A+G+AY+ +
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI------AEGMAYIERKNY-- 131
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
IHRD++AAN+L+ ++ +ADFGLA++ DN + APE + G T
Sbjct: 132 -IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTI 190
Query: 498 KSDVFSFGVMLLELIT-GRRP 517
KSDV+SFG++L E++T G+ P
Sbjct: 191 KSDVWSFGILLYEIVTYGKIP 211
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 116/230 (50%), Gaps = 25/230 (10%)
Query: 307 TYDELAAATGGFAKS---------NLLGQGGFGYVHKG--VLPNGKEVAV--KSLKTGSG 353
TY++ A FAK ++G G FG V G LP ++VAV K+LK G
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 354 QGER-EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHL--HGENRPV 410
+ +R +F E I+ + H ++V L G G M+V EF+ N L+ L H V
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV 144
Query: 411 MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDN 470
+ +R G A G+ YL + + +HRD+ A NIL++ N V+DFGL+++ D+
Sbjct: 145 IQLVGMLR---GIAAGMRYLADMGY---VHRDLAARNILVNSNLVCKVSDFGLSRVIEDD 198
Query: 471 HTHVSTRVMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
V T G + APE K T SDV+S+G+++ E+++ G RP
Sbjct: 199 PEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 138/289 (47%), Gaps = 28/289 (9%)
Query: 309 DELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISR 368
D+ G +G G FG V+KG V + ++ + Q + F EV ++ +
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 369 VHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG-ENRPVMDFATRVRIALGSAKGL 427
H +++ +GY A Q +V ++ +L +HLH E + + + IA +A+G+
Sbjct: 61 TRHVNILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGM 117
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL-SNDNHTHVSTRVMGTFGYLA 486
YLH IIHRD+K+ NI + ++ + DFGLA + S + +H ++ G+ ++A
Sbjct: 118 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 174
Query: 487 PE---YASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGI 543
PE + +SDV++FG++L EL+TG+ P D ++ ++G
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF----MVGR------ 224
Query: 544 YDGLVDPRLE--HNYVPHEMARLVACGAASIRHSARKRPKMSQIVRALE 590
G + P L + P M RL+ A ++ +RP QI+ ++E
Sbjct: 225 --GYLSPDLSKVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 268
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 112/210 (53%), Gaps = 17/210 (8%)
Query: 319 AKSNLLGQGGFGYVHKGVLP--NGKE---VAVKSLKTGSGQGER-EFSAEVEIISRVHHR 372
+ ++G G FG V+KG+L +GK+ VA+K+LK G + +R +F E I+ + H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 373 HLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGEN--RPVMDFATRVRIALGSAKGLAYL 430
+++ L G M++ E++ N L+ L ++ V+ +R G A G+ YL
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIAAGMKYL 163
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFG--YLAPE 488
+ +HRD+ A NIL++ N V+DFGL+++ D+ T G + APE
Sbjct: 164 ---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE 220
Query: 489 YASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
S K T SDV+SFG+++ E++T G RP
Sbjct: 221 AISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 115/229 (50%), Gaps = 18/229 (7%)
Query: 301 FNKSTFTYDELAAATGG--FAKSNLLGQGGFGYVHKG--VLPNGKE--VAVKSLKTGSGQ 354
F T T E A + ++G G FG V G LP+ KE VA+K+LK G +
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 355 GER-EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHL--HGENRPVM 411
+R +F E I+ + H +++ L G M+V E++ N +L+ L H V+
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 412 DFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNH 471
+R G A G+ YL + + +HRD+ A NILI+ N V+DFGLA++ D+
Sbjct: 148 QLVGMLR---GIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLARVLEDDP 201
Query: 472 THVSTRVMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
T G + +PE + K T SDV+S+G++L E+++ G RP
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 28/289 (9%)
Query: 309 DELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISR 368
D+ G +G G FG V+KG V + ++ + Q + F EV ++ +
Sbjct: 6 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 65
Query: 369 VHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG-ENRPVMDFATRVRIALGSAKGL 427
H +++ +GY Q +V ++ +L +HLH E + + + IA +A+G+
Sbjct: 66 TRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGM 122
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL-SNDNHTHVSTRVMGTFGYLA 486
YLH IIHRD+K+ NI + ++ + DFGLA + S + +H ++ G+ ++A
Sbjct: 123 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 179
Query: 487 PE---YASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGI 543
PE + +SDV++FG++L EL+TG+ P D ++ ++G
Sbjct: 180 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF----MVGR------ 229
Query: 544 YDGLVDPRLE--HNYVPHEMARLVACGAASIRHSARKRPKMSQIVRALE 590
G + P L + P M RL+ A ++ +RP QI+ ++E
Sbjct: 230 --GYLSPDLSKVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 273
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 116/230 (50%), Gaps = 25/230 (10%)
Query: 307 TYDELAAATGGFAKS---------NLLGQGGFGYVHKG--VLPNGKE--VAVKSLKTGSG 353
TY++ FAK ++G G FG V G LP+ KE VA+K+LK G
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 354 QGER-EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHL--HGENRPV 410
+ +R +F E I+ + H +++ L G M+V E++ N +L+ L H V
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 411 MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDN 470
+ +R G A G+ YL + + +HRD+ A NILI+ N V+DFGL+++ D+
Sbjct: 147 IQLVGMLR---GIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 471 HTHVSTRVMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
T G + +PE + K T SDV+S+G++L E+++ G RP
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 113/225 (50%), Gaps = 19/225 (8%)
Query: 305 TFTYDELAAATGGFAKSNLLGQGGFGYVH----KGVLPNGKE--VAVKSLKTGSGQGER- 357
F DE A S LGQG FG V+ KGV+ + E VA+K++ + ER
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 358 EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG-----ENRPVM- 411
EF E ++ + H+V L+G G +++ E ++ L+ +L EN PV+
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 412 --DFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSN 468
+ +++A A G+AYL+ + + +HRD+ A N ++ ++F + DFG+ + +
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 181
Query: 469 DNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++ + + +++PE G T SDV+SFGV+L E+ T
Sbjct: 182 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 116/230 (50%), Gaps = 25/230 (10%)
Query: 307 TYDELAAATGGFAKS---------NLLGQGGFGYVHKG--VLPNGKE--VAVKSLKTGSG 353
TY++ FAK ++G G FG V G LP+ KE VA+K+LK G
Sbjct: 25 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 84
Query: 354 QGER-EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHL--HGENRPV 410
+ +R +F E I+ + H +++ L G M+V E++ N +L+ L H V
Sbjct: 85 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 144
Query: 411 MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDN 470
+ +R G A G+ YL + + +HRD+ A NILI+ N V+DFGL+++ D+
Sbjct: 145 IQLVGMLR---GIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDD 198
Query: 471 HTHVSTRVMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
T G + +PE + K T SDV+S+G++L E+++ G RP
Sbjct: 199 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 116/230 (50%), Gaps = 25/230 (10%)
Query: 307 TYDELAAATGGFAKS---------NLLGQGGFGYVHKG--VLPNGKE--VAVKSLKTGSG 353
TY++ FAK ++G G FG V G LP+ KE VA+K+LK G
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 354 QGER-EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHL--HGENRPV 410
+ +R +F E I+ + H +++ L G M+V E++ N +L+ L H V
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 411 MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDN 470
+ +R G A G+ YL + + +HRD+ A NILI+ N V+DFGL+++ D+
Sbjct: 147 IQLVGMLR---GIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 471 HTHVSTRVMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
T G + +PE + K T SDV+S+G++L E+++ G RP
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 105/213 (49%), Gaps = 22/213 (10%)
Query: 324 LGQGGFGYVHKG----VLPNGKE--VAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSL 377
LG+G FG V + P + VAVK+LK S ++F E E+++ + H H+V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 378 VGYCIAGGQRMLVYEFVS----NKTLEYH-----LHGENRPVMDF--ATRVRIALGSAKG 426
G C+ G ++V+E++ NK L H L E P + + + IA A G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGYL 485
+ YL +HRD+ N L+ +N + DFG+++ + + ++ V M ++
Sbjct: 141 MVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
PE K T +SDV+S GV+L E+ T G++P
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 9/217 (4%)
Query: 300 GFNKSTFTYDELAAATGGFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGERE 358
+ S+ YD+ + LG G +G V++GV VAVK+LK + + E E
Sbjct: 2 SMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-E 60
Query: 359 FSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVR 418
F E ++ + H +LV L+G C ++ EF++ L +L NR ++ +
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLY 120
Query: 419 IALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL-SNDNHT-HVST 476
+A + + YL + IHRD+ A N L+ +N VADFGL++L + D +T H
Sbjct: 121 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 477 RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
+ + APE + K + KSDV++FGV+L E+ T
Sbjct: 178 KF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 28/289 (9%)
Query: 309 DELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISR 368
D+ G +G G FG V+KG V + ++ + Q + F EV ++ +
Sbjct: 6 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 65
Query: 369 VHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG-ENRPVMDFATRVRIALGSAKGL 427
H +++ +GY Q +V ++ +L +HLH E + + + IA +A+G+
Sbjct: 66 TRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGM 122
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL-SNDNHTHVSTRVMGTFGYLA 486
YLH IIHRD+K+ NI + ++ + DFGLA + S + +H ++ G+ ++A
Sbjct: 123 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 179
Query: 487 PE---YASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGI 543
PE + +SDV++FG++L EL+TG+ P D ++ ++G
Sbjct: 180 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF----MVGR------ 229
Query: 544 YDGLVDPRLE--HNYVPHEMARLVACGAASIRHSARKRPKMSQIVRALE 590
G + P L + P M RL+ A ++ +RP QI+ ++E
Sbjct: 230 --GYLSPDLSKVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 273
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 28/289 (9%)
Query: 309 DELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISR 368
D+ G +G G FG V+KG V + ++ + Q + F EV ++ +
Sbjct: 3 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 62
Query: 369 VHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG-ENRPVMDFATRVRIALGSAKGL 427
H +++ +GY Q +V ++ +L +HLH E + + + IA +A+G+
Sbjct: 63 TRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGM 119
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL-SNDNHTHVSTRVMGTFGYLA 486
YLH IIHRD+K+ NI + ++ + DFGLA + S + +H ++ G+ ++A
Sbjct: 120 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 176
Query: 487 PE---YASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGI 543
PE + +SDV++FG++L EL+TG+ P D ++ ++G
Sbjct: 177 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF----MVGR------ 226
Query: 544 YDGLVDPRLE--HNYVPHEMARLVACGAASIRHSARKRPKMSQIVRALE 590
G + P L + P M RL+ A ++ +RP QI+ ++E
Sbjct: 227 --GYLSPDLSKVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 270
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 131/278 (47%), Gaps = 30/278 (10%)
Query: 321 SNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGER--EFSAEVEIISRVHHRHLVSLV 378
S +G G FG V+KG +VAVK LK E+ F EV ++ + H +++ +
Sbjct: 41 STRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFM 98
Query: 379 GYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRI 438
GY + +V ++ +L HLH + F + IA +A+G+ YLH I
Sbjct: 99 GY-MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQL-IDIARQTAQGMDYLHAK---NI 153
Query: 439 IHRDIKAANILIDDNFEAMVADFGLAKL-SNDNHTHVSTRVMGTFGYLAPE---YASSGK 494
IHRD+K+ NI + + + DFGLA + S + + + G+ ++APE +
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNP 213
Query: 495 LTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDGLVDPRLEH 554
+ +SDV+S+G++L EL+TG P D ++ ++G G P L
Sbjct: 214 FSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIF----MVGR--------GYASPDLSK 261
Query: 555 NY--VPHEMARLVACGAASIRHSARKRPKMSQIVRALE 590
Y P M RLVA ++ +RP QI+ ++E
Sbjct: 262 LYKNCPKAMKRLVADCVKKVKE---ERPLFPQILSSIE 296
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 9/217 (4%)
Query: 300 GFNKSTFTYDELAAATGGFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGERE 358
+ S+ YD+ + LG G +G V++GV VAVK+LK + + E E
Sbjct: 2 AMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-E 60
Query: 359 FSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVR 418
F E ++ + H +LV L+G C ++ EF++ L +L NR ++ +
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 120
Query: 419 IALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL-SNDNHT-HVST 476
+A + + YL + IHRD+ A N L+ +N VADFGL++L + D +T H
Sbjct: 121 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 477 RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
+ + APE + K + KSDV++FGV+L E+ T
Sbjct: 178 KF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 28/289 (9%)
Query: 309 DELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISR 368
D+ G +G G FG V+KG V + ++ + Q + F EV ++ +
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 369 VHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG-ENRPVMDFATRVRIALGSAKGL 427
H +++ +GY Q +V ++ +L +HLH E + + + IA +A+G+
Sbjct: 61 TRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGM 117
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL-SNDNHTHVSTRVMGTFGYLA 486
YLH IIHRD+K+ NI + ++ + DFGLA + S + +H ++ G+ ++A
Sbjct: 118 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 174
Query: 487 PE---YASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGI 543
PE + +SDV++FG++L EL+TG+ P D ++ ++G
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF----MVGR------ 224
Query: 544 YDGLVDPRLE--HNYVPHEMARLVACGAASIRHSARKRPKMSQIVRALE 590
G + P L + P M RL+ A ++ +RP QI+ ++E
Sbjct: 225 --GYLSPDLSKVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 268
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 5/215 (2%)
Query: 300 GFNKSTFTYDELAAATGGFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGERE 358
+ S+ YD+ + LG G +G V++GV VAVK+LK + + E E
Sbjct: 2 AMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-E 60
Query: 359 FSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVR 418
F E ++ + H +LV L+G C ++ EF++ L +L NR ++ +
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 120
Query: 419 IALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRV 478
+A + + YL + IHRD+ A N L+ +N VADFGL++L +
Sbjct: 121 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 177
Query: 479 MGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
+ APE + K + KSDV++FGV+L E+ T
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 135/288 (46%), Gaps = 26/288 (9%)
Query: 309 DELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISR 368
D+ G +G G FG V+KG V + ++ + Q + F EV ++ +
Sbjct: 29 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 88
Query: 369 VHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLA 428
H +++ +GY Q +V ++ +L +HLH + + IA +A+G+
Sbjct: 89 TRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 146
Query: 429 YLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL-SNDNHTHVSTRVMGTFGYLAP 487
YLH IIHRD+K+ NI + ++ + DFGLA + S + +H ++ G+ ++AP
Sbjct: 147 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 203
Query: 488 E---YASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIY 544
E + +SDV++FG++L EL+TG+ P D ++ ++G
Sbjct: 204 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF----MVGR------- 252
Query: 545 DGLVDPRLE--HNYVPHEMARLVACGAASIRHSARKRPKMSQIVRALE 590
G + P L + P M RL+ A ++ +RP QI+ ++E
Sbjct: 253 -GYLSPDLSKVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 296
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 135/288 (46%), Gaps = 26/288 (9%)
Query: 309 DELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISR 368
D+ G +G G FG V+KG V + ++ + Q + F EV ++ +
Sbjct: 28 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 87
Query: 369 VHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLA 428
H +++ +GY Q +V ++ +L +HLH + + IA +A+G+
Sbjct: 88 TRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 145
Query: 429 YLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL-SNDNHTHVSTRVMGTFGYLAP 487
YLH IIHRD+K+ NI + ++ + DFGLA + S + +H ++ G+ ++AP
Sbjct: 146 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 202
Query: 488 E---YASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIY 544
E + +SDV++FG++L EL+TG+ P D ++ ++G
Sbjct: 203 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF----MVGR------- 251
Query: 545 DGLVDPRLE--HNYVPHEMARLVACGAASIRHSARKRPKMSQIVRALE 590
G + P L + P M RL+ A ++ +RP QI+ ++E
Sbjct: 252 -GYLSPDLSKVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 295
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 109/205 (53%), Gaps = 16/205 (7%)
Query: 323 LLGQGGFGYVHKG--VLPNGKE--VAVKSLKTGSGQGER-EFSAEVEIISRVHHRHLVSL 377
++G G FG V G LP+ KE VA+K+LK G + +R +F E I+ + H +++ L
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 378 VGYCIAGGQRMLVYEFVSNKTLEYHL--HGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G M+V E++ N +L+ L H V+ +R G A G+ YL + +
Sbjct: 83 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGY 139
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFG--YLAPEYASSG 493
+HRD+ A NILI+ N V+DFGL+++ D+ T G + +PE +
Sbjct: 140 ---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 196
Query: 494 KLTEKSDVFSFGVMLLELIT-GRRP 517
K T SDV+S+G++L E+++ G RP
Sbjct: 197 KFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 324 LGQGGFGYVHKGVLP-----NGKEVAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSL 377
LG+G FG V G+ VAVK+LK G G R + E+EI+ ++H H+V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 378 VGYCIAGGQR--MLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G C G++ LV E+V +L +L R + A + A +G+AYLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLFAQQICEGMAYLHAQ-- 131
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMG---TFGYLAPEYASS 492
IHR + A N+L+D++ + DFGLAK + H + R G F Y APE
Sbjct: 132 -HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKE 189
Query: 493 GKLTEKSDVFSFGVMLLELIT 513
K SDV+SFGV L EL+T
Sbjct: 190 CKFYYASDVWSFGVTLYELLT 210
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 109/205 (53%), Gaps = 16/205 (7%)
Query: 323 LLGQGGFGYVHKG--VLPNGKE--VAVKSLKTGSGQGER-EFSAEVEIISRVHHRHLVSL 377
++G G FG V G LP+ KE VA+K+LK G + +R +F E I+ + H +++ L
Sbjct: 40 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 99
Query: 378 VGYCIAGGQRMLVYEFVSNKTLEYHL--HGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G M+V E++ N +L+ L H V+ +R G A G+ YL + +
Sbjct: 100 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGY 156
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFG--YLAPEYASSG 493
+HRD+ A NILI+ N V+DFGL+++ D+ T G + +PE +
Sbjct: 157 ---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 213
Query: 494 KLTEKSDVFSFGVMLLELIT-GRRP 517
K T SDV+S+G++L E+++ G RP
Sbjct: 214 KFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 324 LGQGGFGYVHKGVLP-----NGKEVAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSL 377
LG+G FG V G+ VAVK+LK G G R + E+EI+ ++H H+V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 378 VGYCIAGGQR--MLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G C G++ LV E+V +L +L R + A + A +G+AYLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLFAQQICEGMAYLHAQ-- 130
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMG---TFGYLAPEYASS 492
IHR + A N+L+D++ + DFGLAK + H + R G F Y APE
Sbjct: 131 -HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKE 188
Query: 493 GKLTEKSDVFSFGVMLLELIT 513
K SDV+SFGV L EL+T
Sbjct: 189 CKFYYASDVWSFGVTLYELLT 209
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 115/229 (50%), Gaps = 18/229 (7%)
Query: 301 FNKSTFTYDELAAATGG--FAKSNLLGQGGFGYVHKG--VLPNGKE--VAVKSLKTGSGQ 354
F T T E A + ++G G FG V G LP+ KE VA+K+LK G +
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 355 GER-EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHL--HGENRPVM 411
+R +F E I+ + H +++ L G M+V E++ N +L+ L H V+
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 412 DFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNH 471
+R G A G+ YL + + +HRD+ A NILI+ N V+DFGL+++ D+
Sbjct: 148 QLVGMLR---GIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 472 THVSTRVMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
T G + +PE + K T SDV+S+G++L E+++ G RP
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 9/217 (4%)
Query: 300 GFNKSTFTYDELAAATGGFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGERE 358
+ S+ YD+ + LG G +G V++GV VAVK+LK + + E E
Sbjct: 2 SMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-E 60
Query: 359 FSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVR 418
F E ++ + H +LV L+G C ++ EF++ L +L NR ++ +
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 120
Query: 419 IALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL-SNDNHT-HVST 476
+A + + YL + IHRD+ A N L+ +N VADFGL++L + D +T H
Sbjct: 121 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 477 RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
+ + APE + K + KSDV++FGV+L E+ T
Sbjct: 178 KF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 115/229 (50%), Gaps = 18/229 (7%)
Query: 301 FNKSTFTYDELAAATGG--FAKSNLLGQGGFGYVHKG--VLPNGKE--VAVKSLKTGSGQ 354
F T T E A + ++G G FG V G LP+ KE VA+K+LK G +
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 355 GER-EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHL--HGENRPVM 411
+R +F E I+ + H +++ L G M+V E++ N +L+ L H V+
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 412 DFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNH 471
+R G A G+ YL + + +HRD+ A NILI+ N V+DFGL+++ D+
Sbjct: 148 QLVGMLR---GIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 472 THVSTRVMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
T G + +PE + K T SDV+S+G++L E+++ G RP
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 9/209 (4%)
Query: 308 YDELAAATGGFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEII 366
YD+ + LG G +G V++GV VAVK+LK + + E EF E ++
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 67
Query: 367 SRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKG 426
+ H +LV L+G C ++ EF++ L +L NR ++ + +A +
Sbjct: 68 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 127
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL-SNDNHT-HVSTRVMGTFGY 484
+ YL + IHRD+ A N L+ +N VADFGL++L + D +T H + +
Sbjct: 128 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKW 182
Query: 485 LAPEYASSGKLTEKSDVFSFGVMLLELIT 513
APE + K + KSDV++FGV+L E+ T
Sbjct: 183 TAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 5/207 (2%)
Query: 308 YDELAAATGGFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEII 366
YD+ + LG G +G V++GV VAVK+LK + + E EF E ++
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 64
Query: 367 SRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKG 426
+ H +LV L+G C ++ EF++ L +L NR ++ + +A +
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 124
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLA 486
+ YL + IHRD+ A N L+ +N VADFGL++L + + A
Sbjct: 125 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTA 181
Query: 487 PEYASSGKLTEKSDVFSFGVMLLELIT 513
PE + K + KSDV++FGV+L E+ T
Sbjct: 182 PESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 108/217 (49%), Gaps = 9/217 (4%)
Query: 300 GFNKSTFTYDELAAATGGFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGERE 358
+ S+ YD+ + LG G +G V++GV VAVK+LK + + E E
Sbjct: 2 AMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-E 60
Query: 359 FSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVR 418
F E ++ + H +LV L+G C ++ EF++ L +L NR + +
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 120
Query: 419 IALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL-SNDNHT-HVST 476
+A + + YL + IHRD+ A N L+ +N VADFGL++L + D +T H
Sbjct: 121 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 477 RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
+ + APE + K + KSDV++FGV+L E+ T
Sbjct: 178 KF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 113/225 (50%), Gaps = 19/225 (8%)
Query: 305 TFTYDELAAATGGFAKSNLLGQGGFGYVH----KGVLPNGKE--VAVKSLKTGSGQGER- 357
+ DE A S LGQG FG V+ KGV+ + E VA+K++ + ER
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 358 EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG-----ENRPVM- 411
EF E ++ + H+V L+G G +++ E ++ L+ +L EN PV+
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 412 --DFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSN 468
+ +++A A G+AYL+ + + +HRD+ A N ++ ++F + DFG+ + +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 469 DNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++ + + +++PE G T SDV+SFGV+L E+ T
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 5/207 (2%)
Query: 308 YDELAAATGGFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEII 366
YD+ + LG G +G V++GV VAVK+LK + + E EF E ++
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 64
Query: 367 SRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKG 426
+ H +LV L+G C ++ EF++ L +L NR ++ + +A +
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 124
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLA 486
+ YL + IHRD+ A N L+ +N VADFGL++L + + A
Sbjct: 125 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTA 181
Query: 487 PEYASSGKLTEKSDVFSFGVMLLELIT 513
PE + K + KSDV++FGV+L E+ T
Sbjct: 182 PESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 9/209 (4%)
Query: 308 YDELAAATGGFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEII 366
YD+ + LG G +G V++GV VAVK+LK + + E EF E ++
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 65
Query: 367 SRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKG 426
+ H +LV L+G C ++ EF++ L +L NR ++ + +A +
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL-SNDNHT-HVSTRVMGTFGY 484
+ YL + IHRD+ A N L+ +N VADFGL++L + D +T H + +
Sbjct: 126 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKW 180
Query: 485 LAPEYASSGKLTEKSDVFSFGVMLLELIT 513
APE + K + KSDV++FGV+L E+ T
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 113/225 (50%), Gaps = 19/225 (8%)
Query: 305 TFTYDELAAATGGFAKSNLLGQGGFGYVH----KGVLPNGKE--VAVKSLKTGSGQGER- 357
+ DE A S LGQG FG V+ KGV+ + E VA+K++ + ER
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 358 EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG-----ENRPVM- 411
EF E ++ + H+V L+G G +++ E ++ L+ +L EN PV+
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 412 --DFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSN 468
+ +++A A G+AYL+ + + +HRD+ A N ++ ++F + DFG+ + +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 469 DNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++ + + +++PE G T SDV+SFGV+L E+ T
Sbjct: 184 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 5/207 (2%)
Query: 308 YDELAAATGGFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEII 366
YD+ + LG G +G V++GV VAVK+LK + + E EF E ++
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 65
Query: 367 SRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKG 426
+ H +LV L+G C ++ EF++ L +L NR ++ + +A +
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLA 486
+ YL + IHRD+ A N L+ +N VADFGL++L + + A
Sbjct: 126 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTA 182
Query: 487 PEYASSGKLTEKSDVFSFGVMLLELIT 513
PE + K + KSDV++FGV+L E+ T
Sbjct: 183 PESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 113/225 (50%), Gaps = 19/225 (8%)
Query: 305 TFTYDELAAATGGFAKSNLLGQGGFGYVH----KGVLPNGKE--VAVKSLKTGSGQGER- 357
+ DE A S LGQG FG V+ KGV+ + E VA+K++ + ER
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 358 EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG-----ENRPVM- 411
EF E ++ + H+V L+G G +++ E ++ L+ +L EN PV+
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 412 --DFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSN 468
+ +++A A G+AYL+ + + +HRD+ A N ++ ++F + DFG+ + +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 184
Query: 469 DNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++ + + +++PE G T SDV+SFGV+L E+ T
Sbjct: 185 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 9/209 (4%)
Query: 308 YDELAAATGGFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEII 366
YD+ + LG G +G V++GV VAVK+LK + + E EF E ++
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 367 SRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKG 426
+ H +LV L+G C ++ EF++ L +L NR ++ + +A +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 123
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL-SNDNHT-HVSTRVMGTFGY 484
+ YL + IHRD+ A N L+ +N VADFGL++L + D +T H + +
Sbjct: 124 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKW 178
Query: 485 LAPEYASSGKLTEKSDVFSFGVMLLELIT 513
APE + K + KSDV++FGV+L E+ T
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 28/289 (9%)
Query: 309 DELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISR 368
D+ G +G G FG V+KG V + ++ + Q + F EV ++ +
Sbjct: 21 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 80
Query: 369 VHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG-ENRPVMDFATRVRIALGSAKGL 427
H +++ +GY Q +V ++ +L +HLH E + + + IA +A+G+
Sbjct: 81 TRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGM 137
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLA 486
YLH IIHRD+K+ NI + ++ + DFGLA + S + +H ++ G+ ++A
Sbjct: 138 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 194
Query: 487 PE---YASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGI 543
PE + +SDV++FG++L EL+TG+ P D ++ ++G
Sbjct: 195 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF----MVGR------ 244
Query: 544 YDGLVDPRLE--HNYVPHEMARLVACGAASIRHSARKRPKMSQIVRALE 590
G + P L + P M RL+ A ++ +RP QI+ ++E
Sbjct: 245 --GYLSPDLSKVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 288
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 9/209 (4%)
Query: 308 YDELAAATGGFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEII 366
YD+ + LG G +G V++GV VAVK+LK + + E EF E ++
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 367 SRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKG 426
+ H +LV L+G C ++ EF++ L +L NR ++ + +A +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 123
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL-SNDNHT-HVSTRVMGTFGY 484
+ YL + IHRD+ A N L+ +N VADFGL++L + D +T H + +
Sbjct: 124 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKW 178
Query: 485 LAPEYASSGKLTEKSDVFSFGVMLLELIT 513
APE + K + KSDV++FGV+L E+ T
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 112/214 (52%), Gaps = 21/214 (9%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGK----EVAVKSLKTGSG-QGEREFSAEVEIISRVHH 371
+ +LG G FG V+KG+ +P G+ VA+K L +G + EF E I++ + H
Sbjct: 40 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 99
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
HLV L+G C++ +++ LEY H H +N + ++++ ++ AKG+
Sbjct: 100 PHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGM 153
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGYLA 486
YL E R++HRD+ A N+L+ + DFGLA+ L D + + ++A
Sbjct: 154 MYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMA 210
Query: 487 PEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
E K T +SDV+S+GV + EL+T G +P D
Sbjct: 211 LECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 9/209 (4%)
Query: 308 YDELAAATGGFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEII 366
YD+ + LG G +G V++GV VAVK+LK + + E EF E ++
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 65
Query: 367 SRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKG 426
+ H +LV L+G C ++ EF++ L +L NR ++ + +A +
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL-SNDNHT-HVSTRVMGTFGY 484
+ YL + IHRD+ A N L+ +N VADFGL++L + D +T H + +
Sbjct: 126 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKW 180
Query: 485 LAPEYASSGKLTEKSDVFSFGVMLLELIT 513
APE + K + KSDV++FGV+L E+ T
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 9/209 (4%)
Query: 308 YDELAAATGGFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEII 366
YD+ + LG G +G V++GV VAVK+LK + + E EF E ++
Sbjct: 18 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 76
Query: 367 SRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKG 426
+ H +LV L+G C ++ EF++ L +L NR ++ + +A +
Sbjct: 77 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 136
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL-SNDNHT-HVSTRVMGTFGY 484
+ YL + IHRD+ A N L+ +N VADFGL++L + D +T H + +
Sbjct: 137 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKW 191
Query: 485 LAPEYASSGKLTEKSDVFSFGVMLLELIT 513
APE + K + KSDV++FGV+L E+ T
Sbjct: 192 TAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 28/289 (9%)
Query: 309 DELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISR 368
D+ G +G G FG V+KG V + ++ + Q + F EV ++ +
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 369 VHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG-ENRPVMDFATRVRIALGSAKGL 427
H +++ +GY Q +V ++ +L +HLH E + + + IA +A+G+
Sbjct: 61 TRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGM 117
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLA 486
YLH IIHRD+K+ NI + ++ + DFGLA + S + +H ++ G+ ++A
Sbjct: 118 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 174
Query: 487 PE---YASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGI 543
PE + +SDV++FG++L EL+TG+ P D ++ ++G
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF----MVGR------ 224
Query: 544 YDGLVDPRLE--HNYVPHEMARLVACGAASIRHSARKRPKMSQIVRALE 590
G + P L + P M RL+ A ++ +RP QI+ ++E
Sbjct: 225 --GYLSPDLSKVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 268
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 113/225 (50%), Gaps = 19/225 (8%)
Query: 305 TFTYDELAAATGGFAKSNLLGQGGFGYVH----KGVLPNGKE--VAVKSLKTGSGQGER- 357
+ DE A S LGQG FG V+ KGV+ + E VA+K++ + ER
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 358 EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG-----ENRPVM- 411
EF E ++ + H+V L+G G +++ E ++ L+ +L EN PV+
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 412 --DFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSN 468
+ +++A A G+AYL+ + + +HRD+ A N ++ ++F + DFG+ + +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 469 DNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++ + + +++PE G T SDV+SFGV+L E+ T
Sbjct: 184 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 112/225 (49%), Gaps = 19/225 (8%)
Query: 305 TFTYDELAAATGGFAKSNLLGQGGFGYVH----KGVLPNGKE--VAVKSLKTGSGQGER- 357
+ DE A S LGQG FG V+ KGV+ + E VA+K++ + ER
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 358 EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG-----ENRPVM- 411
EF E ++ + H+V L+G G +++ E ++ L+ +L EN PV+
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 412 --DFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSN 468
+ +++A A G+AYL+ + + +HRD+ A N ++ ++F + DFG+ + +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 184
Query: 469 DNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
+ + + +++PE G T SDV+SFGV+L E+ T
Sbjct: 185 TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 112/221 (50%), Gaps = 19/221 (8%)
Query: 309 DELAAATGGFAKSNLLGQGGFGYVH----KGVLPNGKE--VAVKSLKTGSGQGER-EFSA 361
DE A S LGQG FG V+ KGV+ + E VA+K++ + ER EF
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 362 EVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG-----ENRPVM---DF 413
E ++ + H+V L+G G +++ E ++ L+ +L EN PV+
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 414 ATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHT 472
+ +++A A G+AYL+ + + +HRD+ A N ++ ++F + DFG+ + + ++
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 473 HVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
+ + +++PE G T SDV+SFGV+L E+ T
Sbjct: 182 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 114/229 (49%), Gaps = 18/229 (7%)
Query: 301 FNKSTFTYDELAAATGG--FAKSNLLGQGGFGYVHKG--VLPNGKE--VAVKSLKTGSGQ 354
F T T E A + ++G G FG V G LP+ KE VA+K+LK G +
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 355 GER-EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHL--HGENRPVM 411
+R +F E I+ + H +++ L G M+V E++ N +L+ L H V+
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 412 DFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNH 471
+R G A G+ YL + +HRD+ A NILI+ N V+DFGL+++ D+
Sbjct: 148 QLVGMLR---GIASGMKYLSD---MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 472 THVSTRVMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
T G + +PE + K T SDV+S+G++L E+++ G RP
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 114/229 (49%), Gaps = 18/229 (7%)
Query: 301 FNKSTFTYDELAAATGG--FAKSNLLGQGGFGYVHKG--VLPNGKE--VAVKSLKTGSGQ 354
F T T E A + ++G G FG V G LP+ KE VA+K+LK G +
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 355 GER-EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHL--HGENRPVM 411
+R +F E I+ + H +++ L G M+V E++ N +L+ L H V+
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 412 DFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNH 471
+R G A G+ YL + + +HRD+ A NILI+ N V+DFGL ++ D+
Sbjct: 148 QLVGMLR---GIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201
Query: 472 THVSTRVMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
T G + +PE + K T SDV+S+G++L E+++ G RP
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 135/288 (46%), Gaps = 26/288 (9%)
Query: 309 DELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISR 368
D+ G +G G FG V+KG V + ++ + Q + F EV ++ +
Sbjct: 29 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 88
Query: 369 VHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLA 428
H +++ +GY Q +V ++ +L +HLH + + IA +A+G+
Sbjct: 89 TRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 146
Query: 429 YLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAP 487
YLH IIHRD+K+ NI + ++ + DFGLA + S + +H ++ G+ ++AP
Sbjct: 147 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 203
Query: 488 E---YASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIY 544
E + +SDV++FG++L EL+TG+ P D ++ ++G
Sbjct: 204 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF----MVGR------- 252
Query: 545 DGLVDPRLE--HNYVPHEMARLVACGAASIRHSARKRPKMSQIVRALE 590
G + P L + P M RL+ A ++ +RP QI+ ++E
Sbjct: 253 -GYLSPDLSKVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 296
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 111/221 (50%), Gaps = 19/221 (8%)
Query: 309 DELAAATGGFAKSNLLGQGGFGYVH----KGVLPNGKE--VAVKSLKTGSGQGER-EFSA 361
DE A S LGQG FG V+ KGV+ + E VA+K++ + ER EF
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 362 EVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG-----ENRPVM---DF 413
E ++ + H+V L+G G +++ E ++ L+ +L EN PV+
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 414 ATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHT 472
+ +++A A G+AYL+ + + +HRD+ A N ++ ++F + DFG+ + + +
Sbjct: 123 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 179
Query: 473 HVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
+ + +++PE G T SDV+SFGV+L E+ T
Sbjct: 180 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 115/230 (50%), Gaps = 25/230 (10%)
Query: 307 TYDELAAATGGFAKS---------NLLGQGGFGYVHKG--VLPNGKE--VAVKSLKTGSG 353
TY++ FAK ++G G FG V G LP+ KE VA+K+LK G
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 354 QGER-EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHL--HGENRPV 410
+ +R +F E I+ + H +++ L G M+V E + N +L+ L H V
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV 146
Query: 411 MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDN 470
+ +R G A G+ YL + + +HRD+ A NILI+ N V+DFGL+++ D+
Sbjct: 147 IQLVGMLR---GIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 471 HTHVSTRVMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
T G + +PE + K T SDV+S+G++L E+++ G RP
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 112/214 (52%), Gaps = 21/214 (9%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTGSG-QGEREFSAEVEIISRVHH 371
+ +LG G FG V+KG+ +P G+ V A+K L +G + EF E I++ + H
Sbjct: 17 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 76
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
HLV L+G C++ +++ LEY H H +N + ++++ ++ AKG+
Sbjct: 77 PHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGM 130
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGYLA 486
YL E R++HRD+ A N+L+ + DFGLA+ L D + + ++A
Sbjct: 131 MYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMA 187
Query: 487 PEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
E K T +SDV+S+GV + EL+T G +P D
Sbjct: 188 LECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 105/209 (50%), Gaps = 9/209 (4%)
Query: 308 YDELAAATGGFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEII 366
YD+ + LG G +G V++GV VAVK+LK + + E EF E ++
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 367 SRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKG 426
+ H +LV L+G C ++ EF++ L +L NR + + +A +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL-SNDNHT-HVSTRVMGTFGY 484
+ YL + IHRD+ A N L+ +N VADFGL++L + D +T H + +
Sbjct: 124 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKW 178
Query: 485 LAPEYASSGKLTEKSDVFSFGVMLLELIT 513
APE + K + KSDV++FGV+L E+ T
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 96/191 (50%), Gaps = 5/191 (2%)
Query: 324 LGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCI 382
LG G FG V++GV VAVK+LK + + E EF E ++ + H +LV L+G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 383 AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
++ EF++ L +L NR + + +A + + YL + IHRD
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRD 134
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
+ A N L+ +N VADFGL++L + + APE + K + KSDV+
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 503 SFGVMLLELIT 513
+FGV+L E+ T
Sbjct: 195 AFGVLLWEIAT 205
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 105/209 (50%), Gaps = 9/209 (4%)
Query: 308 YDELAAATGGFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEII 366
YD+ + LG G +G V++GV VAVK+LK + + E EF E ++
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 367 SRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKG 426
+ H +LV L+G C ++ EF++ L +L NR + + +A +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL-SNDNHT-HVSTRVMGTFGY 484
+ YL + IHRD+ A N L+ +N VADFGL++L + D +T H + +
Sbjct: 124 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKW 178
Query: 485 LAPEYASSGKLTEKSDVFSFGVMLLELIT 513
APE + K + KSDV++FGV+L E+ T
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 105/209 (50%), Gaps = 9/209 (4%)
Query: 308 YDELAAATGGFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEII 366
YD+ + LG G +G V++GV VAVK+LK + + E EF E ++
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 367 SRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKG 426
+ H +LV L+G C ++ EF++ L +L NR + + +A +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL-SNDNHT-HVSTRVMGTFGY 484
+ YL + IHRD+ A N L+ +N VADFGL++L + D +T H + +
Sbjct: 124 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKW 178
Query: 485 LAPEYASSGKLTEKSDVFSFGVMLLELIT 513
APE + K + KSDV++FGV+L E+ T
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 113/225 (50%), Gaps = 19/225 (8%)
Query: 305 TFTYDELAAATGGFAKSNLLGQGGFGYVH----KGVLPNGKE--VAVKSLKTGSGQGER- 357
+ DE A S LGQG FG V+ KGV+ + E VA+K++ + ER
Sbjct: 36 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 95
Query: 358 EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG-----ENRPVM- 411
EF E ++ + H+V L+G G +++ E ++ L+ +L EN PV+
Sbjct: 96 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 155
Query: 412 --DFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSN 468
+ +++A A G+AYL+ + + +HRD+ A N ++ ++F + DFG+ + +
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 212
Query: 469 DNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++ + + +++PE G T SDV+SFGV+L E+ T
Sbjct: 213 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 105/209 (50%), Gaps = 9/209 (4%)
Query: 308 YDELAAATGGFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEII 366
YD+ + LG G +G V++GV VAVK+LK + + E EF E ++
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 367 SRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKG 426
+ H +LV L+G C ++ EF++ L +L NR + + +A +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL-SNDNHT-HVSTRVMGTFGY 484
+ YL + IHRD+ A N L+ +N VADFGL++L + D +T H + +
Sbjct: 124 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKW 178
Query: 485 LAPEYASSGKLTEKSDVFSFGVMLLELIT 513
APE + K + KSDV++FGV+L E+ T
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 108/205 (52%), Gaps = 16/205 (7%)
Query: 323 LLGQGGFGYVHKG--VLPNGKE--VAVKSLKTGSGQGER-EFSAEVEIISRVHHRHLVSL 377
++G G FG V G LP+ KE VA+K+LK G + +R +F E I+ + H +++ L
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 378 VGYCIAGGQRMLVYEFVSNKTLEYHL--HGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G M+V E + N +L+ L H V+ +R G A G+ YL + +
Sbjct: 83 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGY 139
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFG--YLAPEYASSG 493
+HRD+ A NILI+ N V+DFGL+++ D+ T G + +PE +
Sbjct: 140 ---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 196
Query: 494 KLTEKSDVFSFGVMLLELIT-GRRP 517
K T SDV+S+G++L E+++ G RP
Sbjct: 197 KFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 115/227 (50%), Gaps = 13/227 (5%)
Query: 308 YDELAAATGGFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEII 366
YD+ + LG G +G V++GV VAVK+LK + + E EF E ++
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 267
Query: 367 SRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKG 426
+ H +LV L+G C ++ EF++ L +L NR ++ + +A +
Sbjct: 268 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 327
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL-SNDNHT-HVSTRVMGTFGY 484
+ YL + IHR++ A N L+ +N VADFGL++L + D +T H + +
Sbjct: 328 MEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKW 382
Query: 485 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP---VDMTMMEDSL 527
APE + K + KSDV++FGV+L E+ T G P +D++ + + L
Sbjct: 383 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 429
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 115/227 (50%), Gaps = 13/227 (5%)
Query: 308 YDELAAATGGFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEII 366
YD+ + LG G +G V++GV VAVK+LK + + E EF E ++
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 309
Query: 367 SRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKG 426
+ H +LV L+G C ++ EF++ L +L NR ++ + +A +
Sbjct: 310 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 369
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL-SNDNHT-HVSTRVMGTFGY 484
+ YL + IHR++ A N L+ +N VADFGL++L + D +T H + +
Sbjct: 370 MEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKW 424
Query: 485 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP---VDMTMMEDSL 527
APE + K + KSDV++FGV+L E+ T G P +D++ + + L
Sbjct: 425 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 471
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 112/225 (49%), Gaps = 19/225 (8%)
Query: 305 TFTYDELAAATGGFAKSNLLGQGGFGYVH----KGVLPNGKE--VAVKSLKTGSGQGER- 357
+ DE A S LGQG FG V+ KGV+ + E VA+K++ + ER
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 358 EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG-----ENRPVM- 411
EF E ++ + H+V L+G G +++ E ++ L+ +L EN PV+
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 412 --DFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSN 468
+ +++A A G+AYL+ + + +HRD+ A N + ++F + DFG+ + +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYE 177
Query: 469 DNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++ + + +++PE G T SDV+SFGV+L E+ T
Sbjct: 178 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 136/280 (48%), Gaps = 34/280 (12%)
Query: 322 NLLGQGGFGYVHKG--VLPNGKE--VAVKSLKTGSGQGER-EFSAEVEIISRVHHRHLVS 376
++G G FG V G LP +E VA+K+LK+G + +R +F +E I+ + H +++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
L G M++ EF+ N +L+ L +N V + G A G+ YL + +
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLR-QNDGQFTVIQLVGMLRGIAAGMKYLADMNY- 130
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMG---TFGYLAPEYASS 492
+HR + A NIL++ N V+DFGL++ L +D T +G + APE
Sbjct: 131 --VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 188
Query: 493 GKLTEKSDVFSFGVMLLELIT-GRRPV-DMTMMEDSLVEWARPLLGAALEDGIYDGLVDP 550
K T SDV+S+G+++ E+++ G RP DMT + + A+E D + P
Sbjct: 189 RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD----------VINAIEQ---DYRLPP 235
Query: 551 RLEHNYVPHEMARLVACGAASIRHSARKRPKMSQIVRALE 590
++ H++ ++ C H RPK QIV L+
Sbjct: 236 PMDCPSALHQL--MLDCWQKDRNH----RPKFGQIVNTLD 269
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 109/207 (52%), Gaps = 18/207 (8%)
Query: 323 LLGQGGFGYVHKGVL--PNGKE--VAVKSLKTG-SGQGEREFSAEVEIISRVHHRHLVSL 377
++G G FG V +G L P KE VA+K+LK G + + REF +E I+ + H +++ L
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 378 VGYCIAGGQRMLVYEFVSNKTLE--YHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G M++ EF+ N L+ L+ V+ +R G A G+ YL E +
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIASGMRYLAEMSY 139
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTH-VSTRVMG---TFGYLAPEYAS 491
+HRD+ A NIL++ N V+DFGL++ +N + T +G + APE +
Sbjct: 140 ---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA 196
Query: 492 SGKLTEKSDVFSFGVMLLELIT-GRRP 517
K T SD +S+G+++ E+++ G RP
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 110/207 (53%), Gaps = 18/207 (8%)
Query: 323 LLGQGGFGYVHKGVL--PNGKE--VAVKSLKTG-SGQGEREFSAEVEIISRVHHRHLVSL 377
++G G FG V +G L P KE VA+K+LK G + + REF +E I+ + H +++ L
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 378 VGYCIAGGQRMLVYEFVSNKTLE--YHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G M++ EF+ N L+ L+ V+ +R G A G+ YL E +
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIASGMRYLAEMSY 137
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS-TRVMG---TFGYLAPEYAS 491
+HRD+ A NIL++ N V+DFGL++ +N + + T +G + APE +
Sbjct: 138 ---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA 194
Query: 492 SGKLTEKSDVFSFGVMLLELIT-GRRP 517
K T SD +S+G+++ E+++ G RP
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 96/191 (50%), Gaps = 5/191 (2%)
Query: 324 LGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCI 382
LG G +G V++GV VAVK+LK + + E EF E ++ + H +LV L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 383 AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
++ EF++ L +L NR + + +A + + YL + IHRD
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRD 134
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
+ A N L+ +N VADFGL++L + + APE + K + KSDV+
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 503 SFGVMLLELIT 513
+FGV+L E+ T
Sbjct: 195 AFGVLLWEIAT 205
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 115/228 (50%), Gaps = 21/228 (9%)
Query: 307 TYDELAAATGGFAKS---------NLLGQGGFGYVHKG--VLPNGKE--VAVKSLKTGSG 353
TY++ A FAK ++G G FG V G LP +E VA+K+LK G
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 354 QGER-EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMD 412
+ +R +F E I+ + H +++ L G M+V E++ N +L+ L +N
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLK-KNDGQFT 122
Query: 413 FATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT 472
V + G + G+ YL + + +HRD+ A NILI+ N V+DFGL+++ D+
Sbjct: 123 VIQLVGMLRGISAGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 179
Query: 473 HVSTRVMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
T G + APE + K T SDV+S+G+++ E+++ G RP
Sbjct: 180 AAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 151/322 (46%), Gaps = 43/322 (13%)
Query: 306 FTYDELAAATGGFAKS---------NLLGQGGFGYVHKGVL--PNGKE--VAVKSLKTG- 351
FT+++ A FAK ++G G FG V G L P +E VA+K+LK G
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 352 SGQGEREFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVM 411
+ + R+F +E I+ + H +++ L G M++ E++ N +L+ L +N
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR-KNDGRF 128
Query: 412 DFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNH 471
V + G G+ YL + +HRD+ A NIL++ N V+DFG++++ D+
Sbjct: 129 TVIQLVGMLRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDP 185
Query: 472 THVSTRVMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPV-DMTMMEDSL 527
T G + APE + K T SDV+S+G+++ E+++ G RP DM+ +
Sbjct: 186 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD--- 242
Query: 528 VEWARPLLGAALEDGIYDGLVDPRLEHNYVPHEMARLVACGAASIRHSARKRPKMSQIVR 587
+ A+E+G + P ++ H++ ++ C + RPK QIV
Sbjct: 243 -------VIKAIEEGYR---LPPPMDCPIALHQL--MLDCW----QKERSDRPKFGQIVN 286
Query: 588 ALEGDSSLDDLNDGVRPGQSSA 609
L D + + N R G S+
Sbjct: 287 ML--DKLIRNPNSLKRTGSESS 306
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 114/227 (50%), Gaps = 13/227 (5%)
Query: 308 YDELAAATGGFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEII 366
YD+ + LG G +G V++GV VAVK+LK + + E EF E ++
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 270
Query: 367 SRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKG 426
+ H +LV L+G C ++ EF++ L +L NR + + +A +
Sbjct: 271 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 330
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL-SNDNHT-HVSTRVMGTFGY 484
+ YL + IHR++ A N L+ +N VADFGL++L + D +T H + +
Sbjct: 331 MEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKW 385
Query: 485 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP---VDMTMMEDSL 527
APE + K + KSDV++FGV+L E+ T G P +D++ + + L
Sbjct: 386 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 432
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 321 SNLLGQGGFGYVHKGVL--PNGKEV--AVKSLKTGSGQGE-REFSAEVEIISRVHHRHLV 375
+ ++G+G FG V+ G L +GK++ AVKSL + GE +F E I+ H +++
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGE--NRPVMDFATRVRIALGSAKGLAYLHE 432
SL+G C+ + G ++V ++ + L + E N V D + L AKG+ YL
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYLAS 169
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNH---THVSTRVMGTFGYLAPEY 489
+ +HRD+ A N ++D+ F VADFGLA+ D H T ++A E
Sbjct: 170 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 226
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ K T KSDV+SFGV+L EL+T P
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 113/229 (49%), Gaps = 18/229 (7%)
Query: 301 FNKSTFTYDELAAATGG--FAKSNLLGQGGFGYVHKG--VLPNGKE--VAVKSLKTGSGQ 354
F T T E A + ++G G FG V G LP+ KE VA+K+LK G +
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 355 GER-EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHL--HGENRPVM 411
+R +F E I+ + H +++ L G M+V E + N +L+ L H V+
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI 147
Query: 412 DFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNH 471
+R G A G+ YL + +HRD+ A NILI+ N V+DFGL+++ D+
Sbjct: 148 QLVGMLR---GIASGMKYLSD---MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 472 THVSTRVMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
T G + +PE + K T SDV+S+G++L E+++ G RP
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 321 SNLLGQGGFGYVHKGVL--PNGKEV--AVKSLKTGSGQGE-REFSAEVEIISRVHHRHLV 375
+ ++G+G FG V+ G L +GK++ AVKSL + GE +F E I+ H +++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGE--NRPVMDFATRVRIALGSAKGLAYLHE 432
SL+G C+ + G ++V ++ + L + E N V D + L AKG+ YL
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYLAS 143
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNH---THVSTRVMGTFGYLAPEY 489
+ +HRD+ A N ++D+ F VADFGLA+ D H T ++A E
Sbjct: 144 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ K T KSDV+SFGV+L EL+T P
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 321 SNLLGQGGFGYVHKGVL--PNGKEV--AVKSLKTGSGQGE-REFSAEVEIISRVHHRHLV 375
+ ++G+G FG V+ G L +GK++ AVKSL + GE +F E I+ H +++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGE--NRPVMDFATRVRIALGSAKGLAYLHE 432
SL+G C+ + G ++V ++ + L + E N V D + L AKG+ YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYLAS 150
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNH---THVSTRVMGTFGYLAPEY 489
+ +HRD+ A N ++D+ F VADFGLA+ D H T ++A E
Sbjct: 151 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ K T KSDV+SFGV+L EL+T P
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 112/225 (49%), Gaps = 19/225 (8%)
Query: 305 TFTYDELAAATGGFAKSNLLGQGGFGYVH----KGVLPNGKE--VAVKSLKTGSGQGER- 357
+ DE A S LGQG FG V+ KGV+ + E VA+K++ + ER
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 358 EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG-----ENRPVM- 411
EF E ++ + H+V L+G G +++ E ++ L+ +L N PV+
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 412 --DFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSN 468
+ +++A A G+AYL+ + + +HRD+ A N ++ ++F + DFG+ + +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 469 DNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++ + + +++PE G T SDV+SFGV+L E+ T
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 321 SNLLGQGGFGYVHKGVL--PNGKEV--AVKSLKTGSGQGE-REFSAEVEIISRVHHRHLV 375
+ ++G+G FG V+ G L +GK++ AVKSL + GE +F E I+ H +++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGE--NRPVMDFATRVRIALGSAKGLAYLHE 432
SL+G C+ + G ++V ++ + L + E N V D + L AKG+ YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYLAS 151
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNH---THVSTRVMGTFGYLAPEY 489
+ +HRD+ A N ++D+ F VADFGLA+ D H T ++A E
Sbjct: 152 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ K T KSDV+SFGV+L EL+T P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 10/200 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LG G FG V G +VAVK +K GS E EF E + + ++ H LV G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 384 GGQRMLVYEFVSNKTLEYHL--HGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHR 441
+V E++SN L +L HG+ ++ + + + +G+A+L + IHR
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKG---LEPSQLLEMCYDVCEGMAFLESH---QFIHR 128
Query: 442 DIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDV 501
D+ A N L+D + V+DFG+ + D+ S + APE K + KSDV
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDV 188
Query: 502 FSFGVMLLELIT-GRRPVDM 520
++FG+++ E+ + G+ P D+
Sbjct: 189 WAFGILMWEVFSLGKMPYDL 208
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 96/191 (50%), Gaps = 5/191 (2%)
Query: 324 LGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCI 382
LG G +G V++GV VAVK+LK + + E EF E ++ + H +LV L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 383 AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
++ EF++ L +L NR + + +A + + YL + IHRD
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRD 134
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
+ A N L+ +N VADFGL++L + + APE + K + KSDV+
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 503 SFGVMLLELIT 513
+FGV+L E+ T
Sbjct: 195 AFGVLLWEIAT 205
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 321 SNLLGQGGFGYVHKGVL--PNGKEV--AVKSLKTGSGQGE-REFSAEVEIISRVHHRHLV 375
+ ++G+G FG V+ G L +GK++ AVKSL + GE +F E I+ H +++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGE--NRPVMDFATRVRIALGSAKGLAYLHE 432
SL+G C+ + G ++V ++ + L + E N V D + L AKG+ YL
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYLAS 148
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNH---THVSTRVMGTFGYLAPEY 489
+ +HRD+ A N ++D+ F VADFGLA+ D H T ++A E
Sbjct: 149 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ K T KSDV+SFGV+L EL+T P
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 324 LGQGGFGYVHKGVLP-----NGKEVAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSL 377
LG+G FG V G+ VAVK+LK G R + E++I+ ++H H++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 378 VGYCIAGGQR--MLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G C G++ LV E+V +L +L R + A + A +G+AYLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHSQ-- 136
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMG---TFGYLAPEYASS 492
IHR++ A N+L+D++ + DFGLAK + H + R G F Y APE
Sbjct: 137 -HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKE 194
Query: 493 GKLTEKSDVFSFGVMLLELIT 513
K SDV+SFGV L EL+T
Sbjct: 195 YKFYYASDVWSFGVTLYELLT 215
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 112/225 (49%), Gaps = 19/225 (8%)
Query: 305 TFTYDELAAATGGFAKSNLLGQGGFGYVH----KGVLPNGKE--VAVKSLKTGSGQGER- 357
+ DE A S LGQG FG V+ KGV+ + E VA+K++ + ER
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 63
Query: 358 EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG-----ENRPVM- 411
EF E ++ + H+V L+G G +++ E ++ L+ +L N PV+
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 412 --DFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSN 468
+ +++A A G+AYL+ + + +HRD+ A N ++ ++F + DFG+ + +
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 180
Query: 469 DNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++ + + +++PE G T SDV+SFGV+L E+ T
Sbjct: 181 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 321 SNLLGQGGFGYVHKGVL--PNGKEV--AVKSLKTGSGQGE-REFSAEVEIISRVHHRHLV 375
+ ++G+G FG V+ G L +GK++ AVKSL + GE +F E I+ H +++
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGE--NRPVMDFATRVRIALGSAKGLAYLHE 432
SL+G C+ + G ++V ++ + L + E N V D + L AKG+ YL
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYLAS 146
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNH---THVSTRVMGTFGYLAPEY 489
+ +HRD+ A N ++D+ F VADFGLA+ D H T ++A E
Sbjct: 147 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ K T KSDV+SFGV+L EL+T P
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 321 SNLLGQGGFGYVHKGVL--PNGKEV--AVKSLKTGSGQGE-REFSAEVEIISRVHHRHLV 375
+ ++G+G FG V+ G L +GK++ AVKSL + GE +F E I+ H +++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGE--NRPVMDFATRVRIALGSAKGLAYLHE 432
SL+G C+ + G ++V ++ + L + E N V D + L AKG+ YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYLAS 150
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNH---THVSTRVMGTFGYLAPEY 489
+ +HRD+ A N ++D+ F VADFGLA+ D H T ++A E
Sbjct: 151 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ K T KSDV+SFGV+L EL+T P
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 321 SNLLGQGGFGYVHKGVL--PNGKEV--AVKSLKTGSGQGE-REFSAEVEIISRVHHRHLV 375
+ ++G+G FG V+ G L +GK++ AVKSL + GE +F E I+ H +++
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGE--NRPVMDFATRVRIALGSAKGLAYLHE 432
SL+G C+ + G ++V ++ + L + E N V D + L AKG+ YL
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYLAS 170
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNH---THVSTRVMGTFGYLAPEY 489
+ +HRD+ A N ++D+ F VADFGLA+ D H T ++A E
Sbjct: 171 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 227
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ K T KSDV+SFGV+L EL+T P
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 321 SNLLGQGGFGYVHKGVL--PNGKEV--AVKSLKTGSGQGE-REFSAEVEIISRVHHRHLV 375
+ ++G+G FG V+ G L +GK++ AVKSL + GE +F E I+ H +++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGE--NRPVMDFATRVRIALGSAKGLAYLHE 432
SL+G C+ + G ++V ++ + L + E N V D + L AKG+ YL
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYLAS 149
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNH---THVSTRVMGTFGYLAPEY 489
+ +HRD+ A N ++D+ F VADFGLA+ D H T ++A E
Sbjct: 150 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ K T KSDV+SFGV+L EL+T P
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 324 LGQGGFGYVHKGVLP-----NGKEVAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSL 377
LG+G FG V G+ VAVK+LK G R + E++I+ ++H H++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 378 VGYCIAGGQR--MLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G C G++ LV E+V +L +L R + A + A +G+AYLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHAQ-- 136
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMG---TFGYLAPEYASS 492
IHR++ A N+L+D++ + DFGLAK + H + R G F Y APE
Sbjct: 137 -HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKE 194
Query: 493 GKLTEKSDVFSFGVMLLELIT 513
K SDV+SFGV L EL+T
Sbjct: 195 YKFYYASDVWSFGVTLYELLT 215
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 24/215 (11%)
Query: 324 LGQGGFGYVHKG----VLPNGKE--VAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSL 377
LG+G FG V +LP + VAVK+LK S ++F E E+++ + H+H+V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 378 VGYCIAGGQRMLVYEFVSNKTLEYHL--HGENRPV-----------MDFATRVRIALGSA 424
G C G ++V+E++ + L L HG + + + + +A A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFG 483
G+ YL H +HRD+ N L+ + DFG+++ + + ++ V R M
Sbjct: 169 AGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 484 YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
++ PE K T +SDV+SFGV+L E+ T G++P
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 321 SNLLGQGGFGYVHKGVL--PNGKEV--AVKSLKTGSGQGE-REFSAEVEIISRVHHRHLV 375
+ ++G+G FG V+ G L +GK++ AVKSL + GE +F E I+ H +++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGE--NRPVMDFATRVRIALGSAKGLAYLHE 432
SL+G C+ + G ++V ++ + L + E N V D + L AKG+ YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYLAS 151
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNH---THVSTRVMGTFGYLAPEY 489
+ +HRD+ A N ++D+ F VADFGLA+ D H T ++A E
Sbjct: 152 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ K T KSDV+SFGV+L EL+T P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 24/215 (11%)
Query: 324 LGQGGFGYVHKG----VLPNGKE--VAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSL 377
LG+G FG V +LP + VAVK+LK S ++F E E+++ + H+H+V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 378 VGYCIAGGQRMLVYEFVSNKTLEYHL--HGENRPVMD-----------FATRVRIALGSA 424
G C G ++V+E++ + L L HG + ++ + +A A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFG 483
G+ YL H +HRD+ N L+ + DFG+++ + + ++ V R M
Sbjct: 146 AGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 484 YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
++ PE K T +SDV+SFGV+L E+ T G++P
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 24/215 (11%)
Query: 324 LGQGGFGYVHKG----VLPNGKE--VAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSL 377
LG+G FG V +LP + VAVK+LK S ++F E E+++ + H+H+V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 378 VGYCIAGGQRMLVYEFVSNKTLEYHL--HGENRPVMD-----------FATRVRIALGSA 424
G C G ++V+E++ + L L HG + ++ + +A A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFG 483
G+ YL H +HRD+ N L+ + DFG+++ + + ++ V R M
Sbjct: 140 AGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 484 YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
++ PE K T +SDV+SFGV+L E+ T G++P
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 324 LGQGGFGYVHKGVLP-----NGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLV 378
LG+G FG V G+ VAVK L+ + + R+F E+EI+ + H ++V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 379 GYCIAGGQR--MLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
G C + G+R L+ EF+ +L +L +++ +D ++ KG+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 136
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMG---TFGYLAPEYASSG 493
R IHRD+ NIL+++ + DFGL K+ + + G F Y APE +
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES 195
Query: 494 KLTEKSDVFSFGVMLLELIT 513
K + SDV+SFGV+L EL T
Sbjct: 196 KFSVASDVWSFGVVLYELFT 215
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 110/208 (52%), Gaps = 17/208 (8%)
Query: 321 SNLLGQGGFGYVHKGVL--PNGKEV--AVKSLKTGSGQGE-REFSAEVEIISRVHHRHLV 375
+ ++G+G FG V+ G L +GK++ AVKSL + GE +F E I+ H +++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGE--NRPVMDFATRVRIALGSAKGLAYLHE 432
SL+G C+ + G ++V ++ + L + E N V D + L AKG+ +L
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFLAS 210
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSND---NHTHVSTRVMGTFGYLAPEY 489
+ +HRD+ A N ++D+ F VADFGLA+ D + H T ++A E
Sbjct: 211 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 267
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ K T KSDV+SFGV+L EL+T P
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 142/312 (45%), Gaps = 47/312 (15%)
Query: 301 FNKSTFTYDELAAATGGFAKS---------NLLGQGGFGYVHKGVL--PNGKEV--AVKS 347
F TY+E A F + ++G G G V G L P ++V A+K+
Sbjct: 25 FYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKA 84
Query: 348 LKTG-SGQGEREFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHL--H 404
LK G + + R+F +E I+ + H +++ L G G M+V E++ N +L+ L H
Sbjct: 85 LKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH 144
Query: 405 GENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLA 464
+M +R G G+ YL + + +HRD+ A N+L+D N V+DFGL+
Sbjct: 145 DGQFTIMQLVGMLR---GVGAGMRYLSDLGY---VHRDLAARNVLVDSNLVCKVSDFGLS 198
Query: 465 KLSNDNHTHVSTRVMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDMT 521
++ D+ T G + APE + + SDV+SFGV++ E++ G RP
Sbjct: 199 RVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM 258
Query: 522 MMEDSLVEWARPLLGAALEDGIYDGLVDPRLEHNY-VPHEMARLVACGAASIRHSAR-KR 579
D + +++E+G RL PH + +L+ H R +R
Sbjct: 259 TNRDVI---------SSVEEGY-------RLPAPMGCPHALHQLM----LDCWHKDRAQR 298
Query: 580 PKMSQIVRALEG 591
P+ SQIV L+
Sbjct: 299 PRFSQIVSVLDA 310
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 110/208 (52%), Gaps = 17/208 (8%)
Query: 321 SNLLGQGGFGYVHKGVL--PNGKEV--AVKSLKTGSGQGE-REFSAEVEIISRVHHRHLV 375
+ ++G+G FG V+ G L +GK++ AVKSL + GE +F E I+ H +++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGE--NRPVMDFATRVRIALGSAKGLAYLHE 432
SL+G C+ + G ++V ++ + L + E N V D + L AKG+ +L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFLAS 151
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSND---NHTHVSTRVMGTFGYLAPEY 489
+ +HRD+ A N ++D+ F VADFGLA+ D + H T ++A E
Sbjct: 152 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ K T KSDV+SFGV+L EL+T P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 110/208 (52%), Gaps = 17/208 (8%)
Query: 321 SNLLGQGGFGYVHKGVL--PNGKEV--AVKSLKTGSGQGE-REFSAEVEIISRVHHRHLV 375
+ ++G+G FG V+ G L +GK++ AVKSL + GE +F E I+ H +++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGE--NRPVMDFATRVRIALGSAKGLAYLHE 432
SL+G C+ + G ++V ++ + L + E N V D + L AKG+ +L
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFLAS 156
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSND---NHTHVSTRVMGTFGYLAPEY 489
+ +HRD+ A N ++D+ F VADFGLA+ D + H T ++A E
Sbjct: 157 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 213
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ K T KSDV+SFGV+L EL+T P
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 110/208 (52%), Gaps = 17/208 (8%)
Query: 321 SNLLGQGGFGYVHKGVL--PNGKEV--AVKSLKTGSGQGE-REFSAEVEIISRVHHRHLV 375
+ ++G+G FG V+ G L +GK++ AVKSL + GE +F E I+ H +++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGE--NRPVMDFATRVRIALGSAKGLAYLHE 432
SL+G C+ + G ++V ++ + L + E N V D + L AKG+ +L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFLAS 151
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSND---NHTHVSTRVMGTFGYLAPEY 489
+ +HRD+ A N ++D+ F VADFGLA+ D + H T ++A E
Sbjct: 152 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ K T KSDV+SFGV+L EL+T P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 110/208 (52%), Gaps = 17/208 (8%)
Query: 321 SNLLGQGGFGYVHKGVL--PNGKEV--AVKSLKTGSGQGE-REFSAEVEIISRVHHRHLV 375
+ ++G+G FG V+ G L +GK++ AVKSL + GE +F E I+ H +++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGE--NRPVMDFATRVRIALGSAKGLAYLHE 432
SL+G C+ + G ++V ++ + L + E N V D + L AKG+ +L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFLAS 152
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSND---NHTHVSTRVMGTFGYLAPEY 489
+ +HRD+ A N ++D+ F VADFGLA+ D + H T ++A E
Sbjct: 153 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ K T KSDV+SFGV+L EL+T P
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 324 LGQGGFGYVHKGVLP-----NGKEVAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSL 377
LG+G FG V G+ VAVK+LK +G R + E++I+ ++H H++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 378 VGYCIAGG--QRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G C G LV E+V +L +L R + A + A +G+AYLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHAQ-- 153
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMG---TFGYLAPEYASS 492
IHRD+ A N+L+D++ + DFGLAK + H R G F Y APE
Sbjct: 154 -HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-APECLKE 211
Query: 493 GKLTEKSDVFSFGVMLLELIT 513
K SDV+SFGV L EL+T
Sbjct: 212 YKFYYASDVWSFGVTLYELLT 232
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 110/208 (52%), Gaps = 17/208 (8%)
Query: 321 SNLLGQGGFGYVHKGVL--PNGKEV--AVKSLKTGSGQGE-REFSAEVEIISRVHHRHLV 375
+ ++G+G FG V+ G L +GK++ AVKSL + GE +F E I+ H +++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGE--NRPVMDFATRVRIALGSAKGLAYLHE 432
SL+G C+ + G ++V ++ + L + E N V D + L AKG+ +L
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFLAS 149
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSND---NHTHVSTRVMGTFGYLAPEY 489
+ +HRD+ A N ++D+ F VADFGLA+ D + H T ++A E
Sbjct: 150 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ K T KSDV+SFGV+L EL+T P
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 141/296 (47%), Gaps = 32/296 (10%)
Query: 322 NLLGQGGFGYVHKGVL--PNGKE--VAVKSLKTG-SGQGEREFSAEVEIISRVHHRHLVS 376
++G G FG V G L P +E VA+K+LK G + + R+F +E I+ + H +++
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
L G M++ E++ N +L+ L +N V + G G+ YL + +
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLDAFLR-KNDGRFTVIQLVGMLRGIGSGMKYLSDMSY- 137
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFG--YLAPEYASSGK 494
+HRD+ A NIL++ N V+DFG++++ D+ T G + APE + K
Sbjct: 138 --VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 195
Query: 495 LTEKSDVFSFGVMLLELIT-GRRPVDMTMMEDSLVEWARPLLGAALEDGIYDGLVDPRLE 553
T SDV+S+G+++ E+++ G RP +D + A+E+G + P ++
Sbjct: 196 FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI---------KAIEEGYR---LPPPMD 243
Query: 554 HNYVPHEMARLVACGAASIRHSARKRPKMSQIVRALEGDSSLDDLNDGVRPGQSSA 609
H++ ++ C + RPK QIV L D + + N R G S+
Sbjct: 244 CPIALHQL--MLDCW----QKERSDRPKFGQIVNML--DKLIRNPNSLKRTGSESS 291
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 110/208 (52%), Gaps = 17/208 (8%)
Query: 321 SNLLGQGGFGYVHKGVL--PNGKEV--AVKSLKTGSGQGE-REFSAEVEIISRVHHRHLV 375
+ ++G+G FG V+ G L +GK++ AVKSL + GE +F E I+ H +++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGE--NRPVMDFATRVRIALGSAKGLAYLHE 432
SL+G C+ + G ++V ++ + L + E N V D + L AKG+ +L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFLAS 152
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSND---NHTHVSTRVMGTFGYLAPEY 489
+ +HRD+ A N ++D+ F VADFGLA+ D + H T ++A E
Sbjct: 153 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ K T KSDV+SFGV+L EL+T P
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 142/312 (45%), Gaps = 47/312 (15%)
Query: 301 FNKSTFTYDELAAATGGFAKS---------NLLGQGGFGYVHKGVL--PNGKEV--AVKS 347
F TY+E A F + ++G G G V G L P ++V A+K+
Sbjct: 25 FYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKA 84
Query: 348 LKTG-SGQGEREFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHL--H 404
LK G + + R+F +E I+ + H +++ L G G M+V E++ N +L+ L H
Sbjct: 85 LKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH 144
Query: 405 GENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLA 464
+M +R G G+ YL + + +HRD+ A N+L+D N V+DFGL+
Sbjct: 145 DGQFTIMQLVGMLR---GVGAGMRYLSDLGY---VHRDLAARNVLVDSNLVCKVSDFGLS 198
Query: 465 KLSNDNHTHVSTRVMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDMT 521
++ D+ T G + APE + + SDV+SFGV++ E++ G RP
Sbjct: 199 RVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM 258
Query: 522 MMEDSLVEWARPLLGAALEDGIYDGLVDPRLEHNY-VPHEMARLVACGAASIRHSAR-KR 579
D + +++E+G RL PH + +L+ H R +R
Sbjct: 259 TNRDVI---------SSVEEGY-------RLPAPMGCPHALHQLM----LDCWHKDRAQR 298
Query: 580 PKMSQIVRALEG 591
P+ SQIV L+
Sbjct: 299 PRFSQIVSVLDA 310
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 141/296 (47%), Gaps = 32/296 (10%)
Query: 322 NLLGQGGFGYVHKGVL--PNGKE--VAVKSLKTG-SGQGEREFSAEVEIISRVHHRHLVS 376
++G G FG V G L P +E VA+K+LK G + + R+F +E I+ + H +++
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
L G M++ E++ N +L+ L +N V + G G+ YL + +
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFLR-KNDGRFTVIQLVGMLRGIGSGMKYLSDMSY- 131
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFG--YLAPEYASSGK 494
+HRD+ A NIL++ N V+DFG++++ D+ T G + APE + K
Sbjct: 132 --VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 189
Query: 495 LTEKSDVFSFGVMLLELIT-GRRPVDMTMMEDSLVEWARPLLGAALEDGIYDGLVDPRLE 553
T SDV+S+G+++ E+++ G RP +D + A+E+G + P ++
Sbjct: 190 FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI---------KAIEEGYR---LPPPMD 237
Query: 554 HNYVPHEMARLVACGAASIRHSARKRPKMSQIVRALEGDSSLDDLNDGVRPGQSSA 609
H++ ++ C + RPK QIV L D + + N R G S+
Sbjct: 238 CPIALHQL--MLDCW----QKERSDRPKFGQIVNML--DKLIRNPNSLKRTGSESS 285
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 32/203 (15%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LG G FG V +VAVK++K GS E F AE ++ + H LV L +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHA-VVT 247
Query: 384 GGQRMLVYEFVSNKTLEYHL---HGENRPV---MDFATRVRIALGSAKGLAYLHEDCHPR 437
++ EF++ +L L G +P+ +DF+ ++ A+G+A++ + +
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAFIEQRNY-- 299
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTF--GYLAPEYASSGKL 495
IHRD++AANIL+ + +ADFGLA RV F + APE + G
Sbjct: 300 -IHRDLRAANILVSASLVCKIADFGLA------------RVGAKFPIKWTAPEAINFGSF 346
Query: 496 TEKSDVFSFGVMLLELIT-GRRP 517
T KSDV+SFG++L+E++T GR P
Sbjct: 347 TIKSDVWSFGILLMEIVTYGRIP 369
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 324 LGQGGFGYVHKGVLP-----NGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLV 378
LG+G FG V G+ VAVK L+ + + R+F E+EI+ + H ++V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 379 GYCIAGGQR--MLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
G C + G+R L+ E++ +L +L +++ +D ++ KG+ YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 133
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMG---TFGYLAPEYASSG 493
R IHRD+ NIL+++ + DFGL K+ + + G F Y APE +
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY-APESLTES 192
Query: 494 KLTEKSDVFSFGVMLLELIT 513
K + SDV+SFGV+L EL T
Sbjct: 193 KFSVASDVWSFGVVLYELFT 212
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 107/211 (50%), Gaps = 13/211 (6%)
Query: 324 LGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCI 382
LG G +G V+ GV VAVK+LK + + E EF E ++ + H +LV L+G C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 383 AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+V E++ L +L NR + + +A + + YL + IHRD
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKK---NFIHRD 155
Query: 443 IKAANILIDDNFEAMVADFGLAKL-SNDNHT-HVSTRVMGTFGYLAPEYASSGKLTEKSD 500
+ A N L+ +N VADFGL++L + D +T H + + APE + + KSD
Sbjct: 156 LAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNTFSIKSD 213
Query: 501 VFSFGVMLLELIT-GRRP---VDMTMMEDSL 527
V++FGV+L E+ T G P +D++ + D L
Sbjct: 214 VWAFGVLLWEIATYGMSPYPGIDLSQVYDLL 244
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 324 LGQGGFGYVHKGVLP-----NGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLV 378
LG+G FG V G+ VAVK L+ + + R+F E+EI+ + H ++V
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 379 GYCIAGGQR--MLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
G C + G+R L+ E++ +L +L +++ +D ++ KG+ YL
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 140
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMG---TFGYLAPEYASSG 493
R IHRD+ NIL+++ + DFGL K+ + + G F Y APE +
Sbjct: 141 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES 199
Query: 494 KLTEKSDVFSFGVMLLELIT 513
K + SDV+SFGV+L EL T
Sbjct: 200 KFSVASDVWSFGVVLYELFT 219
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 324 LGQGGFGYVHKGVLP-----NGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLV 378
LG+G FG V G+ VAVK L+ + + R+F E+EI+ + H ++V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 379 GYCIAGGQR--MLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
G C + G+R L+ E++ +L +L +++ +D ++ KG+ YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 133
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMG---TFGYLAPEYASSG 493
R IHRD+ NIL+++ + DFGL K+ + + G F Y APE +
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES 192
Query: 494 KLTEKSDVFSFGVMLLELIT 513
K + SDV+SFGV+L EL T
Sbjct: 193 KFSVASDVWSFGVVLYELFT 212
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 324 LGQGGFGYVHKGVLP-----NGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLV 378
LG+G FG V G+ VAVK L+ + + R+F E+EI+ + H ++V
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 379 GYCIAGGQR--MLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
G C + G+R L+ E++ +L +L +++ +D ++ KG+ YL
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 164
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMG---TFGYLAPEYASSG 493
R IHRD+ NIL+++ + DFGL K+ + + G F Y APE +
Sbjct: 165 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES 223
Query: 494 KLTEKSDVFSFGVMLLELIT 513
K + SDV+SFGV+L EL T
Sbjct: 224 KFSVASDVWSFGVVLYELFT 243
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 324 LGQGGFGYVHKGVLP-----NGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLV 378
LG+G FG V G+ VAVK L+ + + R+F E+EI+ + H ++V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 379 GYCIAGGQR--MLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
G C + G+R L+ E++ +L +L +++ +D ++ KG+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 136
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMG---TFGYLAPEYASSG 493
R IHRD+ NIL+++ + DFGL K+ + + G F Y APE +
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES 195
Query: 494 KLTEKSDVFSFGVMLLELIT 513
K + SDV+SFGV+L EL T
Sbjct: 196 KFSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 324 LGQGGFGYVHKGVLP-----NGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLV 378
LG+G FG V G+ VAVK L+ + + R+F E+EI+ + H ++V
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 379 GYCIAGGQR--MLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
G C + G+R L+ E++ +L +L +++ +D ++ KG+ YL
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 138
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMG---TFGYLAPEYASSG 493
R IHRD+ NIL+++ + DFGL K+ + + G F Y APE +
Sbjct: 139 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES 197
Query: 494 KLTEKSDVFSFGVMLLELIT 513
K + SDV+SFGV+L EL T
Sbjct: 198 KFSVASDVWSFGVVLYELFT 217
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 324 LGQGGFGYVHKGVLP-----NGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLV 378
LG+G FG V G+ VAVK L+ + + R+F E+EI+ + H ++V
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 379 GYCIAGGQR--MLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
G C + G+R L+ E++ +L +L +++ +D ++ KG+ YL
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 131
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMG---TFGYLAPEYASSG 493
R IHRD+ NIL+++ + DFGL K+ + + G F Y APE +
Sbjct: 132 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES 190
Query: 494 KLTEKSDVFSFGVMLLELIT 513
K + SDV+SFGV+L EL T
Sbjct: 191 KFSVASDVWSFGVVLYELFT 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 324 LGQGGFGYVHKGVLP-----NGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLV 378
LG+G FG V G+ VAVK L+ + + R+F E+EI+ + H ++V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 379 GYCIAGGQR--MLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
G C + G+R L+ E++ +L +L +++ +D ++ KG+ YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 133
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMG---TFGYLAPEYASSG 493
R IHRD+ NIL+++ + DFGL K+ + + G F Y APE +
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES 192
Query: 494 KLTEKSDVFSFGVMLLELIT 513
K + SDV+SFGV+L EL T
Sbjct: 193 KFSVASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 324 LGQGGFGYVHKGVLP-----NGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLV 378
LG+G FG V G+ VAVK L+ + + R+F E+EI+ + H ++V
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 379 GYCIAGGQR--MLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
G C + G+R L+ E++ +L +L +++ +D ++ KG+ YL
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 132
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMG---TFGYLAPEYASSG 493
R IHRD+ NIL+++ + DFGL K+ + + G F Y APE +
Sbjct: 133 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES 191
Query: 494 KLTEKSDVFSFGVMLLELIT 513
K + SDV+SFGV+L EL T
Sbjct: 192 KFSVASDVWSFGVVLYELFT 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 324 LGQGGFGYVHKGVLP-----NGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLV 378
LG+G FG V G+ VAVK L+ + + R+F E+EI+ + H ++V
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 379 GYCIAGGQR--MLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
G C + G+R L+ E++ +L +L +++ +D ++ KG+ YL
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 137
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMG---TFGYLAPEYASSG 493
R IHRD+ NIL+++ + DFGL K+ + + G F Y APE +
Sbjct: 138 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES 196
Query: 494 KLTEKSDVFSFGVMLLELIT 513
K + SDV+SFGV+L EL T
Sbjct: 197 KFSVASDVWSFGVVLYELFT 216
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 324 LGQGGFGYVHKGVLP-----NGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLV 378
LG+G FG V G+ VAVK L+ + + R+F E+EI+ + H ++V
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 379 GYCIAGGQR--MLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
G C + G+R L+ E++ +L +L +++ +D ++ KG+ YL
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 139
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMG---TFGYLAPEYASSG 493
R IHRD+ NIL+++ + DFGL K+ + + G F Y APE +
Sbjct: 140 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES 198
Query: 494 KLTEKSDVFSFGVMLLELIT 513
K + SDV+SFGV+L EL T
Sbjct: 199 KFSVASDVWSFGVVLYELFT 218
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 324 LGQGGFGYVHKGVLP-----NGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLV 378
LG+G FG V G+ VAVK L+ + + R+F E+EI+ + H ++V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 379 GYCIAGGQR--MLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
G C + G+R L+ E++ +L +L +++ +D ++ KG+ YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 151
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMG---TFGYLAPEYASSG 493
R IHRD+ NIL+++ + DFGL K+ + + G F Y APE +
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES 210
Query: 494 KLTEKSDVFSFGVMLLELIT 513
K + SDV+SFGV+L EL T
Sbjct: 211 KFSVASDVWSFGVVLYELFT 230
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 324 LGQGGFGYVHKGVLP-----NGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLV 378
LG+G FG V G+ VAVK L+ + + R+F E+EI+ + H ++V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 379 GYCIAGGQR--MLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
G C + G+R L+ E++ +L +L +++ +D ++ KG+ YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 151
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMG---TFGYLAPEYASSG 493
R IHRD+ NIL+++ + DFGL K+ + + G F Y APE +
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES 210
Query: 494 KLTEKSDVFSFGVMLLELIT 513
K + SDV+SFGV+L EL T
Sbjct: 211 KFSVASDVWSFGVVLYELFT 230
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 99/202 (49%), Gaps = 19/202 (9%)
Query: 324 LGQGGFGYVHKGVLP-----NGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLV 378
LG+G FG V G+ VAVK L+ + + R+F E+EI+ + H ++V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 379 GYCIAGGQR--MLVYEFVSNKTLEYHL--HGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
G C + G+R L+ E++ +L +L H E +D ++ KG+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER---IDHIKLLQYTSQICKGMEYLGTK- 136
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMG---TFGYLAPEYAS 491
R IHRD+ NIL+++ + DFGL K+ + + G F Y APE +
Sbjct: 137 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLT 193
Query: 492 SGKLTEKSDVFSFGVMLLELIT 513
K + SDV+SFGV+L EL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 15/200 (7%)
Query: 324 LGQGGFGYVHKGVLP-----NGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLV 378
LG+G FG V G+ VAVK L+ + + R+F E+EI+ + H ++V
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 379 GYCIAGGQR--MLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
G C + G+R L+ E++ +L +L +++ +D ++ KG+ YL
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 134
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMG---TFGYLAPEYASSG 493
R IHR++ NIL+++ + DFGL K+ + + + G F Y APE +
Sbjct: 135 RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY-APESLTES 193
Query: 494 KLTEKSDVFSFGVMLLELIT 513
K + SDV+SFGV+L EL T
Sbjct: 194 KFSVASDVWSFGVVLYELFT 213
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 324 LGQGGFGYVHKGVLPNGKE------VAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSL 377
LG+G FG V N VAVK+LK + ++F E E+++ + H H+V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 378 VGYCIAGGQRMLVYEFVS----NKTLEYH-------LHGENRPV---MDFATRVRIALGS 423
G C G ++V+E++ NK L H + G+ R + + + IA
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 424 AKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTF 482
A G+ YL +HRD+ N L+ N + DFG+++ + + ++ V M
Sbjct: 143 ASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 483 GYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
++ PE K T +SDV+SFGV+L E+ T G++P
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 103/220 (46%), Gaps = 21/220 (9%)
Query: 312 AAATGGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGERE-FSAEVEIISRV 369
G + LG GGFGYV + + G++VA+K + RE + E++I+ ++
Sbjct: 11 TQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL 70
Query: 370 HHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATR--------VRIAL 421
+H ++VS + G + L + +EY G+ R ++ +R L
Sbjct: 71 NHPNVVS--AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLL 128
Query: 422 GS-AKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMV---ADFGLAKLSNDNHTHVSTR 477
+ L YLHE+ RIIHRD+K NI++ + ++ D G AK + + T
Sbjct: 129 SDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTE 183
Query: 478 VMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+GT YLAPE K T D +SFG + E ITG RP
Sbjct: 184 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 103/220 (46%), Gaps = 21/220 (9%)
Query: 312 AAATGGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGERE-FSAEVEIISRV 369
G + LG GGFGYV + + G++VA+K + RE + E++I+ ++
Sbjct: 10 TQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL 69
Query: 370 HHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATR--------VRIAL 421
+H ++VS + G + L + +EY G+ R ++ +R L
Sbjct: 70 NHPNVVS--AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLL 127
Query: 422 GS-AKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMV---ADFGLAKLSNDNHTHVSTR 477
+ L YLHE+ RIIHRD+K NI++ + ++ D G AK + + T
Sbjct: 128 SDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTE 182
Query: 478 VMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+GT YLAPE K T D +SFG + E ITG RP
Sbjct: 183 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 12/204 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
+G+G FG V G G +VAVK +K + + F AE +++++ H +LV L+G +
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 384 -GGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
G +V E+++ +L +L R V+ ++ +L + + YL + +HRD
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRD 314
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
+ A N+L+ ++ A V+DFGL K ++ V T APE K + KSDV+
Sbjct: 315 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKSDVW 370
Query: 503 SFGVMLLELIT-GRRPVDMTMMED 525
SFG++L E+ + GR P ++D
Sbjct: 371 SFGILLWEIYSFGRVPYPRIPLKD 394
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 6/197 (3%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LG G FG V G +VA+K +K GS E EF E +++ + H LV L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 384 GGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDI 443
++ E+++N L +L E R + + + + YL + +HRD+
Sbjct: 91 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDL 146
Query: 444 KAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 503
A N L++D V+DFGL++ D+ S + PE K + KSD+++
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 206
Query: 504 FGVMLLELIT-GRRPVD 519
FGV++ E+ + G+ P +
Sbjct: 207 FGVLMWEIYSLGKMPYE 223
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 323 LLGQGGFGYVHKGVLPNGKEVAV-KSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYC 381
+LG+G FG K EV V K L + +R F EV+++ + H +++ +G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHR 441
+ + E++ TL + + ++ RV A A G+AYLH IIHR
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMDSQY-PWSQRVSFAKDIASGMAYLHSM---NIIHR 132
Query: 442 DIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS-------------TRVMGTFGYLAPE 488
D+ + N L+ +N +VADFGLA+L D T V+G ++APE
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192
Query: 489 YASSGKLTEKSDVFSFGVMLLELI 512
+ EK DVFSFG++L E+I
Sbjct: 193 MINGRSYDEKVDVFSFGIVLCEII 216
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 16/201 (7%)
Query: 324 LGQGGFGYVHKGVLP-----NGKEVAVKSLKTGSGQGE-REFSAEVEIISRVHHRHLVSL 377
LG+G FG V G++VAVKSLK SG + E+EI+ ++H ++V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 378 VGYCIAGGQR--MLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G C G L+ EF+ + +L+ +L +N+ ++ +++ A+ KG+ YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYLGSR-- 145
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMGTFGYLAPEYASS 492
+ +HRD+ A N+L++ + + DFGL K + T R F Y APE
Sbjct: 146 -QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQ 203
Query: 493 GKLTEKSDVFSFGVMLLELIT 513
K SDV+SFGV L EL+T
Sbjct: 204 SKFYIASDVWSFGVTLHELLT 224
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 6/197 (3%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LG G FG V G +VA+K +K GS E EF E +++ + H LV L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 384 GGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDI 443
++ E+++N L +L E R + + + + YL + +HRD+
Sbjct: 91 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDL 146
Query: 444 KAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 503
A N L++D V+DFGL++ D+ S + PE K + KSD+++
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 206
Query: 504 FGVMLLELIT-GRRPVD 519
FGV++ E+ + G+ P +
Sbjct: 207 FGVLMWEIYSLGKMPYE 223
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 324 LGQGGFGYVHKGVLP-----NGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLV 378
LG+G FG V G VAVK L+ +R+F E++I+ +H +V
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 379 GYCIAGGQR--MLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
G G++ LV E++ + L L +R +D + + + KG+ YL
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYLGSR--- 134
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMG---TFGYLAPEYASSG 493
R +HRD+ A NIL++ +ADFGLAKL + + R G F Y APE S
Sbjct: 135 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESLSDN 193
Query: 494 KLTEKSDVFSFGVMLLELIT 513
+ +SDV+SFGV+L EL T
Sbjct: 194 IFSRQSDVWSFGVVLYELFT 213
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 16/201 (7%)
Query: 324 LGQGGFGYVHKGVLP-----NGKEVAVKSLKTGSGQGE-REFSAEVEIISRVHHRHLVSL 377
LG+G FG V G++VAVKSLK SG + E+EI+ ++H ++V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 378 VGYCIAGGQR--MLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G C G L+ EF+ + +L+ +L +N+ ++ +++ A+ KG+ YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYLGSR-- 133
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMGTFGYLAPEYASS 492
+ +HRD+ A N+L++ + + DFGL K + T R F Y APE
Sbjct: 134 -QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQ 191
Query: 493 GKLTEKSDVFSFGVMLLELIT 513
K SDV+SFGV L EL+T
Sbjct: 192 SKFYIASDVWSFGVTLHELLT 212
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 16/203 (7%)
Query: 324 LGQGGFGYVHKGVLPNGK---EVAVKSLKTGSGQGE-REFSAEVEIISRVHHRHLVSLVG 379
LG G FG V +GV K +VA+K LK G+ + + E E +I+ ++ + ++V L+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHG--ENRPVMDFATRVRIALGSAKGLAYLHEDCHPR 437
C A MLV E L L G E PV + A + + G+ YL E
Sbjct: 78 VCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLH---QVSMGMKYLEEK---N 130
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTF--GYLAPEYASSGKL 495
+HRD+ A N+L+ + A ++DFGL+K + ++ + R G + + APE + K
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 190
Query: 496 TEKSDVFSFGVMLLELIT-GRRP 517
+ +SDV+S+GV + E ++ G++P
Sbjct: 191 SSRSDVWSYGVTMWEALSYGQKP 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 96/207 (46%), Gaps = 29/207 (14%)
Query: 324 LGQGGFGYVHKGVLP-----NGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLV 378
LG+G FG V G VAVK L+ +R+F E++I+ +H +V
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 379 GYCIAGGQR--MLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH- 435
G G++ LV E++ + L DF R R L +++ L Y + C
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLR-----------DFLQRHRARLDASRLLLYSSQICKG 139
Query: 436 ------PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMG---TFGYLA 486
R +HRD+ A NIL++ +ADFGLAKL + + R G F Y A
Sbjct: 140 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-A 198
Query: 487 PEYASSGKLTEKSDVFSFGVMLLELIT 513
PE S + +SDV+SFGV+L EL T
Sbjct: 199 PESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 96/207 (46%), Gaps = 29/207 (14%)
Query: 324 LGQGGFGYVHKGVLP-----NGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLV 378
LG+G FG V G VAVK L+ +R+F E++I+ +H +V
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 379 GYCIAGGQR--MLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH- 435
G G++ LV E++ + L DF R R L +++ L Y + C
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLR-----------DFLQRHRARLDASRLLLYSSQICKG 126
Query: 436 ------PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMG---TFGYLA 486
R +HRD+ A NIL++ +ADFGLAKL + + R G F Y A
Sbjct: 127 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-A 185
Query: 487 PEYASSGKLTEKSDVFSFGVMLLELIT 513
PE S + +SDV+SFGV+L EL T
Sbjct: 186 PESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 108/229 (47%), Gaps = 19/229 (8%)
Query: 301 FNKSTFTYDELAAATGGFAKSNLLGQGGFGYVHKG----VLPNGKE--VAVKSLKTGSGQ 354
F S F DE + LGQG FG V++G ++ E VAVK++ +
Sbjct: 2 FPSSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL 61
Query: 355 GER-EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHL-----HGEN- 407
ER EF E ++ H+V L+G G ++V E +++ L+ +L EN
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 121
Query: 408 --RPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK 465
RP +++A A G+AYL+ + +HRD+ A N ++ +F + DFG+ +
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 466 -LSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
+ + + + ++APE G T SD++SFGV+L E+ +
Sbjct: 179 DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 12/204 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
+G+G FG V G G +VAVK +K + + F AE +++++ H +LV L+G +
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 384 -GGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
G +V E+++ +L +L R V+ ++ +L + + YL + +HRD
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRD 142
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
+ A N+L+ ++ A V+DFGL K ++ V T APE K + KSDV+
Sbjct: 143 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKSDVW 198
Query: 503 SFGVMLLELIT-GRRPVDMTMMED 525
SFG++L E+ + GR P ++D
Sbjct: 199 SFGILLWEIYSFGRVPYPRIPLKD 222
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 109/229 (47%), Gaps = 19/229 (8%)
Query: 301 FNKSTFTYDELAAATGGFAKSNLLGQGGFGYVHKG----VLPNGKE--VAVKSLKTGSGQ 354
F S F DE + LGQG FG V++G ++ E VAVK++ +
Sbjct: 2 FPSSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL 61
Query: 355 GER-EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHL-----HGEN- 407
ER EF E ++ H+V L+G G ++V E +++ L+ +L EN
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 121
Query: 408 --RPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK 465
RP +++A A G+AYL+ + +HRD+ A N ++ +F + DFG+ +
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 466 -LSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
+ ++ + + ++APE G T SD++SFGV+L E+ +
Sbjct: 179 DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 12/204 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
+G+G FG V G G +VAVK +K + + F AE +++++ H +LV L+G +
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 384 -GGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
G +V E+++ +L +L R V+ ++ +L + + YL + +HRD
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRD 127
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
+ A N+L+ ++ A V+DFGL K ++ V T APE K + KSDV+
Sbjct: 128 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKSDVW 183
Query: 503 SFGVMLLELIT-GRRPVDMTMMED 525
SFG++L E+ + GR P ++D
Sbjct: 184 SFGILLWEIYSFGRVPYPRIPLKD 207
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 100/199 (50%), Gaps = 11/199 (5%)
Query: 324 LGQGGFG--YVHKGVLPNGKEVAVKSLKTGSGQGE---REFSAEVEIISRVHHRHLVSLV 378
LG GG Y+ + + N K VA+K++ + E + F EV S++ H+++VS++
Sbjct: 19 LGGGGMSTVYLAEDTILNIK-VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI 77
Query: 379 GYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRI 438
LV E++ TL ++ E+ + T + G+ + H+ RI
Sbjct: 78 DVDEEDDCYYLVMEYIEGPTLSEYI--ESHGPLSVDTAINFTNQILDGIKHAHD---MRI 132
Query: 439 IHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEK 498
+HRDIK NILID N + DFG+AK ++ + V+GT Y +PE A E
Sbjct: 133 VHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDEC 192
Query: 499 SDVFSFGVMLLELITGRRP 517
+D++S G++L E++ G P
Sbjct: 193 TDIYSIGIVLYEMLVGEPP 211
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 6/197 (3%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LG G FG V G +VA+K +K GS E EF E +++ + H LV L G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 384 GGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDI 443
++ E+++N L +L E R + + + + YL + +HRD+
Sbjct: 82 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDL 137
Query: 444 KAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 503
A N L++D V+DFGL++ D+ S + PE K + KSD+++
Sbjct: 138 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 197
Query: 504 FGVMLLELIT-GRRPVD 519
FGV++ E+ + G+ P +
Sbjct: 198 FGVLMWEIYSLGKMPYE 214
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 6/197 (3%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LG G FG V G +VA+K +K GS E EF E +++ + H LV L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 384 GGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDI 443
++ E+++N L +L E R + + + + YL + +HRD+
Sbjct: 76 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDL 131
Query: 444 KAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 503
A N L++D V+DFGL++ D+ S + PE K + KSD+++
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 191
Query: 504 FGVMLLELIT-GRRPVD 519
FGV++ E+ + G+ P +
Sbjct: 192 FGVLMWEIYSLGKMPYE 208
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 6/197 (3%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LG G FG V G +VA+K +K GS E EF E +++ + H LV L G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 384 GGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDI 443
++ E+++N L +L E R + + + + YL + +HRD+
Sbjct: 75 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDL 130
Query: 444 KAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 503
A N L++D V+DFGL++ D+ S + PE K + KSD+++
Sbjct: 131 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 190
Query: 504 FGVMLLELIT-GRRPVD 519
FGV++ E+ + G+ P +
Sbjct: 191 FGVLMWEIYSLGKMPYE 207
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 6/197 (3%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LG G FG V G +VA+K +K GS E EF E +++ + H LV L G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 384 GGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDI 443
++ E+++N L +L E R + + + + YL + +HRD+
Sbjct: 71 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDL 126
Query: 444 KAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 503
A N L++D V+DFGL++ D+ S + PE K + KSD+++
Sbjct: 127 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 186
Query: 504 FGVMLLELIT-GRRPVD 519
FGV++ E+ + G+ P +
Sbjct: 187 FGVLMWEIYSLGKMPYE 203
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 28/215 (13%)
Query: 324 LGQGGFGYV--------HKGVLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRH 373
LG+G FG V K VAVK LK + + + + +E+E++ + H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMD--------------FATRVRI 419
+++L+G C G ++ E+ S L +L P M+ F V
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 420 ALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRV 478
A+G+ YL + IHRD+ A N+L+ +N +ADFGLA+ ++N ++ +T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 479 MGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE----VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLV 378
+G+G FG VH+G+ + + VA+K+ K + RE F E + + H H+V L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 379 GYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRI 438
G I ++ E + L L + +D A+ + A + LAYL R
Sbjct: 83 GV-ITENPVWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESK---RF 137
Query: 439 IHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEK 498
+HRDI A N+L+ N + DFGL++ D+ + +++ ++APE + + T
Sbjct: 138 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 197
Query: 499 SDVFSFGVMLLELIT-GRRP 517
SDV+ FGV + E++ G +P
Sbjct: 198 SDVWMFGVCMWEILMHGVKP 217
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE----VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLV 378
+G+G FG VH+G+ + + VA+K+ K + RE F E + + H H+V L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 379 GYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRI 438
G I ++ E + L L +D A+ + A + LAYL R
Sbjct: 106 GV-ITENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAYLESK---RF 160
Query: 439 IHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEK 498
+HRDI A N+L+ N + DFGL++ D+ + +++ ++APE + + T
Sbjct: 161 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 220
Query: 499 SDVFSFGVMLLELIT-GRRP 517
SDV+ FGV + E++ G +P
Sbjct: 221 SDVWMFGVCMWEILMHGVKP 240
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 6/197 (3%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LG G FG V G +VA+K +K GS E EF E +++ + H LV L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 384 GGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDI 443
++ E+++N L +L E R + + + + YL + +HRD+
Sbjct: 76 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDL 131
Query: 444 KAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 503
A N L++D V+DFGL++ D+ S + PE K + KSD+++
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWA 191
Query: 504 FGVMLLELIT-GRRPVD 519
FGV++ E+ + G+ P +
Sbjct: 192 FGVLMWEIYSLGKMPYE 208
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE----VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLV 378
+G+G FG VH+G+ + + VA+K+ K + RE F E + + H H+V L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 379 GYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRI 438
G I ++ E + L L + +D A+ + A + LAYL R
Sbjct: 75 GV-ITENPVWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESK---RF 129
Query: 439 IHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEK 498
+HRDI A N+L+ N + DFGL++ D+ + +++ ++APE + + T
Sbjct: 130 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 189
Query: 499 SDVFSFGVMLLELIT-GRRP 517
SDV+ FGV + E++ G +P
Sbjct: 190 SDVWMFGVCMWEILMHGVKP 209
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE----VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLV 378
+G+G FG VH+G+ + + VA+K+ K + RE F E + + H H+V L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 379 GYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRI 438
G I ++ E + L L + +D A+ + A + LAYL R
Sbjct: 81 GV-ITENPVWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESK---RF 135
Query: 439 IHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEK 498
+HRDI A N+L+ N + DFGL++ D+ + +++ ++APE + + T
Sbjct: 136 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 195
Query: 499 SDVFSFGVMLLELIT-GRRP 517
SDV+ FGV + E++ G +P
Sbjct: 196 SDVWMFGVCMWEILMHGVKP 215
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 28/215 (13%)
Query: 324 LGQGGFGYV--------HKGVLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRH 373
LG+G FG V K VAVK LK + + + + +E+E++ + H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMD--------------FATRVRI 419
+++L+G C G ++ E+ S L +L P M+ F V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 420 ALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRV 478
A+G+ YL + IHRD+ A N+L+ +N +ADFGLA+ ++N ++ +T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 479 MGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE----VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLV 378
+G+G FG VH+G+ + + VA+K+ K + RE F E + + H H+V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 379 GYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRI 438
G I ++ E + L L +D A+ + A + LAYL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAYLESK---RF 132
Query: 439 IHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEK 498
+HRDI A N+L+ N + DFGL++ D+ + +++ ++APE + + T
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 192
Query: 499 SDVFSFGVMLLELIT-GRRP 517
SDV+ FGV + E++ G +P
Sbjct: 193 SDVWMFGVCMWEILMHGVKP 212
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE----VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLV 378
+G+G FG VH+G+ + + VA+K+ K + RE F E + + H H+V L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 379 GYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRI 438
G I ++ E + L L + +D A+ + A + LAYL R
Sbjct: 80 GV-ITENPVWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESK---RF 134
Query: 439 IHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEK 498
+HRDI A N+L+ N + DFGL++ D+ + +++ ++APE + + T
Sbjct: 135 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 194
Query: 499 SDVFSFGVMLLELIT-GRRP 517
SDV+ FGV + E++ G +P
Sbjct: 195 SDVWMFGVCMWEILMHGVKP 214
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 117/225 (52%), Gaps = 33/225 (14%)
Query: 318 FAKSNL-----LGQGGFG-YVHKGVLPNGKE-----VAVKSLKTGSGQGERE-FSAEVEI 365
F ++NL LG G FG V GKE VAVK LK+ + E+E +E++I
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 366 ISRV-HHRHLVSLVGYCIAGGQRMLVYE---------FVSNKT---LEYHLHGENRPVMD 412
+S + H ++V+L+G C GG +++ E F+ K LEY + + P
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQ 162
Query: 413 FATRVRIALGS--AKGLAYL-HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSN 468
++R + S A+G+A+L ++C IHRD+ A N+L+ + A + DFGLA+ + N
Sbjct: 163 LSSRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMN 218
Query: 469 DNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
D++ V ++APE T +SDV+S+G++L E+ +
Sbjct: 219 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE----VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLV 378
+G+G FG VH+G+ + + VA+K+ K + RE F E + + H H+V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 379 GYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRI 438
G I ++ E + L L +D A+ + A + LAYL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAYLESK---RF 132
Query: 439 IHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEK 498
+HRDI A N+L+ N + DFGL++ D+ + +++ ++APE + + T
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 192
Query: 499 SDVFSFGVMLLELIT-GRRP 517
SDV+ FGV + E++ G +P
Sbjct: 193 SDVWMFGVCMWEILMHGVKP 212
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 108/229 (47%), Gaps = 19/229 (8%)
Query: 301 FNKSTFTYDELAAATGGFAKSNLLGQGGFGYVHKG----VLPNGKE--VAVKSLKTGSGQ 354
F S + DE + LGQG FG V++G ++ E VAVK++ +
Sbjct: 2 FPSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL 61
Query: 355 GER-EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHL-----HGEN- 407
ER EF E ++ H+V L+G G ++V E +++ L+ +L EN
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 121
Query: 408 --RPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK 465
RP +++A A G+AYL+ + +HRD+ A N ++ +F + DFG+ +
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 466 -LSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
+ + + + ++APE G T SD++SFGV+L E+ +
Sbjct: 179 DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 28/215 (13%)
Query: 324 LGQGGFGYV--------HKGVLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRH 373
LG+G FG V K VAVK LK + + + + +E+E++ + H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMD--------------FATRVRI 419
+++L+G C G ++ E+ S L +L P M+ F V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 420 ALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRV 478
A+G+ YL + IHRD+ A N+L+ +N +ADFGLA+ ++N ++ +T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 479 MGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 108/229 (47%), Gaps = 19/229 (8%)
Query: 301 FNKSTFTYDELAAATGGFAKSNLLGQGGFGYVHKG----VLPNGKE--VAVKSLKTGSGQ 354
F S F DE + LGQG FG V++G ++ E VAVK++ +
Sbjct: 2 FPSSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL 61
Query: 355 GER-EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHL-----HGEN- 407
ER EF E ++ H+V L+G G ++V E +++ L+ +L EN
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 121
Query: 408 --RPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK 465
RP +++A A G+AYL+ + +HRD+ A N ++ +F + DFG+ +
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 466 -LSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
+ + + + ++APE G T SD++SFGV+L E+ +
Sbjct: 179 DIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 105/201 (52%), Gaps = 12/201 (5%)
Query: 320 KSNLLGQGGFGYVHKGV-LPNGKE----VAVKSLKTGSG-QGEREFSAEVEIISRVHHRH 373
K +LG G FG VHKGV +P G+ V +K ++ SG Q + + + I + H H
Sbjct: 35 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAH 94
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHED 433
+V L+G C G LV +++ +L H+ ++R + + + AKG+ YL E
Sbjct: 95 IVRLLGLC-PGSSLQLVTQYLPLGSLLDHVR-QHRGALGPQLLLNWGVQIAKGMYYLEEH 152
Query: 434 CHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGYLAPEYASS 492
++HR++ A N+L+ + VADFG+A L D+ + + ++A E
Sbjct: 153 G---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF 209
Query: 493 GKLTEKSDVFSFGVMLLELIT 513
GK T +SDV+S+GV + EL+T
Sbjct: 210 GKYTHQSDVWSYGVTVWELMT 230
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 12/204 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
+G+G FG V G G +VAVK +K + + F AE +++++ H +LV L+G +
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 384 -GGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
G +V E+++ +L +L R V+ ++ +L + + YL + +HRD
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRD 133
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
+ A N+L+ ++ A V+DFGL K ++ V T APE + KSDV+
Sbjct: 134 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREAAFSTKSDVW 189
Query: 503 SFGVMLLELIT-GRRPVDMTMMED 525
SFG++L E+ + GR P ++D
Sbjct: 190 SFGILLWEIYSFGRVPYPRIPLKD 213
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 16/203 (7%)
Query: 324 LGQGGFGYVHKGVLPNGK---EVAVKSLKTGSGQGE-REFSAEVEIISRVHHRHLVSLVG 379
LG G FG V +GV K +VA+K LK G+ + + E E +I+ ++ + ++V L+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHG--ENRPVMDFATRVRIALGSAKGLAYLHEDCHPR 437
C A MLV E L L G E PV + A + + G+ YL E
Sbjct: 404 VCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQV---SMGMKYLEEK---N 456
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTF--GYLAPEYASSGKL 495
+HR++ A N+L+ + A ++DFGL+K + ++ + R G + + APE + K
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 516
Query: 496 TEKSDVFSFGVMLLELIT-GRRP 517
+ +SDV+S+GV + E ++ G++P
Sbjct: 517 SSRSDVWSYGVTMWEALSYGQKP 539
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 28/215 (13%)
Query: 324 LGQGGFGYV--------HKGVLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRH 373
LG+G FG V K VAVK LK + + + + +E+E++ + H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMD--------------FATRVRI 419
+++L+G C G ++ E+ S L +L P M+ F V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 420 ALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRV 478
A+G+ YL + IHRD+ A N+L+ +N +ADFGLA+ ++N ++ +T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 479 MGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 324 LGQGGFGYVHKGVLP-----NGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLV 378
LG+G FG V G VAVK L+ +R+F E++I+ +H +V
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 379 GYCIAGG--QRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH- 435
G G + LV E++ + L DF R R L +++ L Y + C
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLR-----------DFLQRHRARLDASRLLLYSSQICKG 123
Query: 436 ------PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMG---TFGYLA 486
R +HRD+ A NIL++ +ADFGLAKL + R G F Y A
Sbjct: 124 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY-A 182
Query: 487 PEYASSGKLTEKSDVFSFGVMLLELIT 513
PE S + +SDV+SFGV+L EL T
Sbjct: 183 PESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 28/215 (13%)
Query: 324 LGQGGFGYV--------HKGVLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRH 373
LG+G FG V K VAVK LK + + + + +E+E++ + H++
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMD--------------FATRVRI 419
+++L+G C G ++ E+ S L +L P M+ F V
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 420 ALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRV 478
A+G+ YL + IHRD+ A N+L+ +N +ADFGLA+ ++N ++ +T
Sbjct: 150 TYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 479 MGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+SFGV++ E+ T
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 105/201 (52%), Gaps = 12/201 (5%)
Query: 320 KSNLLGQGGFGYVHKGV-LPNGKE----VAVKSLKTGSG-QGEREFSAEVEIISRVHHRH 373
K +LG G FG VHKGV +P G+ V +K ++ SG Q + + + I + H H
Sbjct: 17 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAH 76
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHED 433
+V L+G C G LV +++ +L H+ ++R + + + AKG+ YL E
Sbjct: 77 IVRLLGLC-PGSSLQLVTQYLPLGSLLDHVR-QHRGALGPQLLLNWGVQIAKGMYYLEEH 134
Query: 434 CHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGYLAPEYASS 492
++HR++ A N+L+ + VADFG+A L D+ + + ++A E
Sbjct: 135 G---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF 191
Query: 493 GKLTEKSDVFSFGVMLLELIT 513
GK T +SDV+S+GV + EL+T
Sbjct: 192 GKYTHQSDVWSYGVTVWELMT 212
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 28/215 (13%)
Query: 324 LGQGGFGYV--------HKGVLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRH 373
LG+G FG V K VAVK LK + + + + +E+E++ + H++
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMD--------------FATRVRI 419
+++L+G C G ++ E+ S L +L P M+ F V
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 420 ALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRV 478
A+G+ YL + IHRD+ A N+L+ +N +ADFGLA+ ++N ++ +T
Sbjct: 209 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 479 MGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+SFGV++ E+ T
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 19/226 (8%)
Query: 304 STFTYDELAAATGGFAKSNLLGQGGFGYVHKG----VLPNGKE--VAVKSLKTGSGQGER 357
S F DE + LGQG FG V++G ++ E VAVK++ + ER
Sbjct: 2 SVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 61
Query: 358 -EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHL-----HGEN---R 408
EF E ++ H+V L+G G ++V E +++ L+ +L EN R
Sbjct: 62 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 121
Query: 409 PVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LS 467
P +++A A G+AYL+ + +HRD+ A N ++ +F + DFG+ + +
Sbjct: 122 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIX 178
Query: 468 NDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
+ + + ++APE G T SD++SFGV+L E+ +
Sbjct: 179 ETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 28/215 (13%)
Query: 324 LGQGGFGYV--------HKGVLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRH 373
LG+G FG V K VAVK LK + + + + +E+E++ + H++
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMD--------------FATRVRI 419
+++L+G C G ++ E+ S L +L P M+ F V
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 420 ALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRV 478
A+G+ YL + IHRD+ A N+L+ +N +ADFGLA+ ++N ++ +T
Sbjct: 155 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 479 MGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+SFGV++ E+ T
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 28/215 (13%)
Query: 324 LGQGGFGYV--------HKGVLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRH 373
LG+G FG V K VAVK LK + + + + +E+E++ + H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMD--------------FATRVRI 419
+++L+G C G ++ E+ S L +L P M+ F V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 420 ALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRV 478
A+G+ YL + IHRD+ A N+L+ +N +ADFGLA+ ++N + +T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 479 MGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE----VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLV 378
+G+G FG VH+G+ + + VA+K+ K + RE F E + + H H+V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 379 GYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRI 438
G I ++ E + L L + +D A+ + A + LAYL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESK---RF 132
Query: 439 IHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEK 498
+HRDI A N+L+ N + DFGL++ D+ +++ ++APE + + T
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSA 192
Query: 499 SDVFSFGVMLLELIT-GRRP 517
SDV+ FGV + E++ G +P
Sbjct: 193 SDVWMFGVCMWEILMHGVKP 212
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE----VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLV 378
+G+G FG VH+G+ + + VA+K+ K + RE F E + + H H+V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 379 GYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRI 438
G I ++ E + L L + +D A+ + A + LAYL R
Sbjct: 458 G-VITENPVWIIMELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESK---RF 512
Query: 439 IHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEK 498
+HRDI A N+L+ N + DFGL++ D+ + +++ ++APE + + T
Sbjct: 513 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 572
Query: 499 SDVFSFGVMLLELIT-GRRP 517
SDV+ FGV + E++ G +P
Sbjct: 573 SDVWMFGVCMWEILMHGVKP 592
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 28/215 (13%)
Query: 324 LGQGGFGYV--------HKGVLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRH 373
LG+G FG V K VAVK LK + + + + +E+E++ + H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMD--------------FATRVRI 419
+++L+G C G ++ E+ S L +L P M+ F V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 420 ALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRV 478
A+G+ YL + IHRD+ A N+L+ +N +ADFGLA+ ++N + +T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 479 MGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 28/215 (13%)
Query: 324 LGQGGFGYV--------HKGVLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRH 373
LG+G FG V K VAVK LK + + + + +E+E++ + H++
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMD--------------FATRVRI 419
+++L+G C G ++ E+ S L +L P M+ F V
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 420 ALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRV 478
A+G+ YL + IHRD+ A N+L+ +N +ADFGLA+ ++N ++ +T
Sbjct: 152 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 479 MGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+SFGV++ E+ T
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 28/215 (13%)
Query: 324 LGQGGFGYV--------HKGVLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRH 373
LG+G FG V K VAVK LK + + + + +E+E++ + H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMD--------------FATRVRI 419
++ L+G C G ++ E+ S L +L P M+ F V
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 420 ALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRV 478
A+G+ YL + IHRD+ A N+L+ +N +ADFGLA+ ++N ++ +T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 479 MGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 112/215 (52%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +LG G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ ++++ L+Y H +N + ++++ ++ AKG+
Sbjct: 78 PHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKGM 131
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFGLAKL + + H + ++
Sbjct: 132 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWM 187
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 17/210 (8%)
Query: 320 KSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHHRH 373
K +LG G FG V+KG+ +P+G+ V A+K L+ S + +E E +++ V +
Sbjct: 21 KVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPY 80
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHED 433
+ L+G C+ + LV + + L H+ ENR + + + AKG++YL ED
Sbjct: 81 VSRLLGICLTSTVQ-LVTQLMPYGCLLDHVR-ENRGRLGSQDLLNWCMQIAKGMSYL-ED 137
Query: 434 CHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVST---RVMGTFGYLAPEYA 490
R++HRD+ A N+L+ + DFGLA+L + + T +V ++A E
Sbjct: 138 V--RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV--PIKWMALESI 193
Query: 491 SSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
+ T +SDV+S+GV + EL+T G +P D
Sbjct: 194 LRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 21/207 (10%)
Query: 324 LGQGGFGYVHKGVL------PNGKEVAVKSL-KTGSGQGEREFSAEVEIISRVHHRHLVS 376
LG G FG V++G + P+ +VAVK+L + S Q E +F E IIS+++H+++V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRP------VMDFATRVRIALGSAKGLAYL 430
+G + R ++ E ++ L+ L E RP + + +A A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVA---DFGLAK-LSNDNHTHVSTRVMGTFGYLA 486
E+ IHRDI A N L+ VA DFG+A+ + ++ M ++
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 487 PEYASSGKLTEKSDVFSFGVMLLELIT 513
PE G T K+D +SFGV+L E+ +
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 112/215 (52%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +LG G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ ++++ L+Y H +N + ++++ ++ AKG+
Sbjct: 81 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 134
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFGLAKL + + H + ++
Sbjct: 135 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWM 190
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGER---EFSAEVEIISRVHHRHLVSLV 378
+LG GG VH L + ++VAVK L+ + F E + + ++H +V++
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 379 ----GYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
AG +V E+V TL +H E M + + + + L + H++
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQNG 136
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSND--NHTHVSTRVMGTFGYLAPEYASS 492
IIHRD+K ANILI V DFG+A+ D N + V+GT YL+PE A
Sbjct: 137 ---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARG 193
Query: 493 GKLTEKSDVFSFGVMLLELITGRRP 517
+ +SDV+S G +L E++TG P
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 112/215 (52%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +LG G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ ++++ L+Y H +N + ++++ ++ AKG+
Sbjct: 79 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 132
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFGLAKL + + H + ++
Sbjct: 133 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWM 188
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 111/215 (51%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +LG G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ +++ L+Y H +N + ++++ ++ AKG+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKGM 130
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFGLAKL + + H + ++
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWM 186
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 21/207 (10%)
Query: 324 LGQGGFGYVHKGVL------PNGKEVAVKSL-KTGSGQGEREFSAEVEIISRVHHRHLVS 376
LG G FG V++G + P+ +VAVK+L + S Q E +F E IIS+++H+++V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRP------VMDFATRVRIALGSAKGLAYL 430
+G + R ++ E ++ L+ L E RP + + +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVA---DFGLAK-LSNDNHTHVSTRVMGTFGYLA 486
E+ IHRDI A N L+ VA DFG+A+ + ++ M ++
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 487 PEYASSGKLTEKSDVFSFGVMLLELIT 513
PE G T K+D +SFGV+L E+ +
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 112/215 (52%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +LG G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ ++++ L+Y H +N + ++++ ++ AKG+
Sbjct: 80 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 133
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFGLAKL + + H + ++
Sbjct: 134 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWM 189
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 113/219 (51%), Gaps = 27/219 (12%)
Query: 318 FAKSNL-----LGQGGFG-YVHKGVLPNGKE-----VAVKSLKTGSGQGERE-FSAEVEI 365
F ++NL LG G FG V GKE VAVK LK+ + E+E +E++I
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 366 ISRV-HHRHLVSLVGYCIAGGQRMLVYEFVS--------NKTLEYHLHGENRPVMDFATR 416
+S + H ++V+L+G C GG +++ E+ + E L E+ ++
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 162
Query: 417 VRIALGSAKGLAYL-HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHV 474
+ + A+G+A+L ++C IHRD+ A N+L+ + A + DFGLA+ + ND++ V
Sbjct: 163 LHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 218
Query: 475 STRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+S+G++L E+ +
Sbjct: 219 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 112/215 (52%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +LG G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ ++++ L+Y H +N + ++++ ++ AKG+
Sbjct: 78 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 131
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFGLAKL + + H + ++
Sbjct: 132 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWM 187
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 112/215 (52%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +LG G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ ++++ L+Y H +N + ++++ ++ AKG+
Sbjct: 77 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 130
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFGLAKL + + H + ++
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWM 186
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 114/219 (52%), Gaps = 27/219 (12%)
Query: 318 FAKSNL-----LGQGGFGYVHKGV-LPNGKE-----VAVKSLKTGSGQGERE-FSAEVEI 365
F ++NL LG G FG V + GKE VAVK LK+ + E+E +E++I
Sbjct: 35 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 94
Query: 366 ISRV-HHRHLVSLVGYCIAGGQRMLVYEFVS--------NKTLEYHLHGENRPVMDFATR 416
+S + H ++V+L+G C GG +++ E+ + E L E+ ++
Sbjct: 95 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 154
Query: 417 VRIALGSAKGLAYL-HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHV 474
+ + A+G+A+L ++C IHRD+ A N+L+ + A + DFGLA+ + ND++ V
Sbjct: 155 LHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 210
Query: 475 STRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+S+G++L E+ +
Sbjct: 211 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 111/215 (51%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +LG G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ +++ L+Y H +N + ++++ ++ AKG+
Sbjct: 79 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 132
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFGLAKL + + H + ++
Sbjct: 133 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWM 188
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 111/215 (51%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +LG G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ +++ L+Y H +N + ++++ ++ AKG+
Sbjct: 80 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 133
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFGLAKL + + H + ++
Sbjct: 134 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWM 189
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 111/215 (51%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +LG G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ +++ L+Y H +N + ++++ ++ AKG+
Sbjct: 102 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 155
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFGLAKL + + H + ++
Sbjct: 156 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWM 211
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 212 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 111/215 (51%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +LG G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ +++ L+Y H +N + ++++ ++ AKG+
Sbjct: 83 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 136
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFGLAKL + + H + ++
Sbjct: 137 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWM 192
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 193 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 111/215 (51%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +LG G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ +++ L+Y H +N + ++++ ++ AKG+
Sbjct: 80 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 133
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFGLAKL + + H + ++
Sbjct: 134 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWM 189
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 111/215 (51%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +LG G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ +++ L+Y H +N + ++++ ++ AKG+
Sbjct: 80 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 133
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFGLAKL + + H + ++
Sbjct: 134 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWM 189
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 31/223 (13%)
Query: 318 FAKSNL-----LGQGGFGYVHKGV-LPNGKE-----VAVKSLKTGSGQGERE-FSAEVEI 365
F ++NL LG G FG V + GKE VAVK LK+ + E+E +E++I
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 366 ISRV-HHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR-----PVMDFA----- 414
+S + H ++V+L+G C GG +++ E+ L L ++R P A
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAS 162
Query: 415 TRVRIALGS--AKGLAYL-HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDN 470
TR + S A+G+A+L ++C IHRD+ A N+L+ + A + DFGLA+ + ND+
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
+ V ++APE T +SDV+S+G++L E+ +
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 111/215 (51%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +LG G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ +++ L+Y H +N + ++++ ++ AKG+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 130
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFGLAKL + + H + ++
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWM 186
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 111/215 (51%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +LG G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ +++ L+Y H +N + ++++ ++ AKG+
Sbjct: 84 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 137
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFGLAKL + + H + ++
Sbjct: 138 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWM 193
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 31/223 (13%)
Query: 318 FAKSNL-----LGQGGFGYVHKGV-LPNGKE-----VAVKSLKTGSGQGERE-FSAEVEI 365
F ++NL LG G FG V + GKE VAVK LK+ + E+E +E++I
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 366 ISRV-HHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR-----PVMDFA----- 414
+S + H ++V+L+G C GG +++ E+ L L ++R P A
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLS 162
Query: 415 TRVRIALGS--AKGLAYL-HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDN 470
TR + S A+G+A+L ++C IHRD+ A N+L+ + A + DFGLA+ + ND+
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
+ V ++APE T +SDV+S+G++L E+ +
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 111/215 (51%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +LG G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ +++ L+Y H +N + ++++ ++ AKG+
Sbjct: 87 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 140
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFGLAKL + + H + ++
Sbjct: 141 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWM 196
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 197 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 21/207 (10%)
Query: 324 LGQGGFGYVHKGVL------PNGKEVAVKSL-KTGSGQGEREFSAEVEIISRVHHRHLVS 376
LG G FG V++G + P+ +VAVK+L + S Q E +F E IIS+ +H+++V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRP------VMDFATRVRIALGSAKGLAYL 430
+G + R ++ E ++ L+ L E RP + + +A A G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVA---DFGLAK-LSNDNHTHVSTRVMGTFGYLA 486
E+ IHRDI A N L+ VA DFG+A+ + ++ M ++
Sbjct: 157 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 487 PEYASSGKLTEKSDVFSFGVMLLELIT 513
PE G T K+D +SFGV+L E+ +
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 321 SNLLGQGGFGYVHKGVLPNGK----EVAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLV 375
+ +LG+G FG V++GV N K VAVK+ K +E F +E I+ + H H+V
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE-DC 434
L+G I ++ E L ++L N+ + T V +L K +AYL +C
Sbjct: 77 KLIGI-IEEEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMAYLESINC 134
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGK 494
+HRDI NIL+ + DFGL++ D + ++ +++PE + +
Sbjct: 135 ----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR 190
Query: 495 LTEKSDVFSFGVMLLELIT-GRRP 517
T SDV+ F V + E+++ G++P
Sbjct: 191 FTTASDVWMFAVCMWEILSFGKQP 214
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 21/207 (10%)
Query: 324 LGQGGFGYVHKGVL------PNGKEVAVKSL-KTGSGQGEREFSAEVEIISRVHHRHLVS 376
LG G FG V++G + P+ +VAVK+L + S Q E +F E IIS+ +H+++V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRP------VMDFATRVRIALGSAKGLAYL 430
+G + R ++ E ++ L+ L E RP + + +A A G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVA---DFGLAK-LSNDNHTHVSTRVMGTFGYLA 486
E+ IHRDI A N L+ VA DFG+A+ + ++ M ++
Sbjct: 149 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 205
Query: 487 PEYASSGKLTEKSDVFSFGVMLLELIT 513
PE G T K+D +SFGV+L E+ +
Sbjct: 206 PEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 321 SNLLGQGGFGYVHKGVLPNGK----EVAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLV 375
+ +LG+G FG V++GV N K VAVK+ K +E F +E I+ + H H+V
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE-DC 434
L+G I ++ E L ++L N+ + T V +L K +AYL +C
Sbjct: 73 KLIGI-IEEEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMAYLESINC 130
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGK 494
+HRDI NIL+ + DFGL++ D + ++ +++PE + +
Sbjct: 131 ----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR 186
Query: 495 LTEKSDVFSFGVMLLELIT-GRRP 517
T SDV+ F V + E+++ G++P
Sbjct: 187 FTTASDVWMFAVCMWEILSFGKQP 210
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 21/207 (10%)
Query: 324 LGQGGFGYVHKGVL------PNGKEVAVKSL-KTGSGQGEREFSAEVEIISRVHHRHLVS 376
LG G FG V++G + P+ +VAVK+L + S Q E +F E IIS+ +H+++V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRP------VMDFATRVRIALGSAKGLAYL 430
+G + R ++ E ++ L+ L E RP + + +A A G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVA---DFGLAK-LSNDNHTHVSTRVMGTFGYLA 486
E+ IHRDI A N L+ VA DFG+A+ + ++ M ++
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 487 PEYASSGKLTEKSDVFSFGVMLLELIT 513
PE G T K+D +SFGV+L E+ +
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 321 SNLLGQGGFGYVHKGVLPNGK----EVAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLV 375
+ +LG+G FG V++GV N K VAVK+ K +E F +E I+ + H H+V
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE-DC 434
L+G I ++ E L ++L N+ + T V +L K +AYL +C
Sbjct: 89 KLIGI-IEEEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMAYLESINC 146
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGK 494
+HRDI NIL+ + DFGL++ D + ++ +++PE + +
Sbjct: 147 ----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR 202
Query: 495 LTEKSDVFSFGVMLLELIT-GRRP 517
T SDV+ F V + E+++ G++P
Sbjct: 203 FTTASDVWMFAVCMWEILSFGKQP 226
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 19/229 (8%)
Query: 301 FNKSTFTYDELAAATGGFAKSNLLGQGGFGYVHKG----VLPNGKE--VAVKSLKTGSGQ 354
F S + DE + LGQG FG V++G ++ E VAVK++ +
Sbjct: 3 FPSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL 62
Query: 355 GER-EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHL-----HGEN- 407
ER EF E ++ H+V L+G G ++V E +++ L+ +L EN
Sbjct: 63 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 122
Query: 408 --RPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK 465
RP +++A A G+AYL+ + +HR++ A N ++ +F + DFG+ +
Sbjct: 123 PGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR 179
Query: 466 -LSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
+ ++ + + ++APE G T SD++SFGV+L E+ +
Sbjct: 180 DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 42/222 (18%)
Query: 324 LGQGGFGYVHKGVL----------PNG-KEVAVKSLKTGSGQGE-REFSAEVEIISRV-H 370
LG+G FG V VL PN +VAVK LK+ + + + + +E+E++ +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 371 HRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATR-------------- 416
H+++++L+G C G ++ E+ S L +L P ++F+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 417 VRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVST 476
V A A+G+ YL + IHRD+ A N+L+ ++ +ADFGLA+ D H H+
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR---DIH-HIDX 205
Query: 477 RVMGTFG-----YLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
T G ++APE T +SDV+SFGV+L E+ T
Sbjct: 206 XKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 21/207 (10%)
Query: 324 LGQGGFGYVHKGVL------PNGKEVAVKSL-KTGSGQGEREFSAEVEIISRVHHRHLVS 376
LG G FG V++G + P+ +VAVK+L + S Q E +F E IIS+ +H+++V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRP------VMDFATRVRIALGSAKGLAYL 430
+G + R ++ E ++ L+ L E RP + + +A A G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVA---DFGLAK-LSNDNHTHVSTRVMGTFGYLA 486
E+ IHRDI A N L+ VA DFG+A+ + ++ M ++
Sbjct: 157 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 487 PEYASSGKLTEKSDVFSFGVMLLELIT 513
PE G T K+D +SFGV+L E+ +
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 21/207 (10%)
Query: 324 LGQGGFGYVHKGVL------PNGKEVAVKSL-KTGSGQGEREFSAEVEIISRVHHRHLVS 376
LG G FG V++G + P+ +VAVK+L + S Q E +F E IIS+ +H+++V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRP------VMDFATRVRIALGSAKGLAYL 430
+G + R ++ E ++ L+ L E RP + + +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVA---DFGLAK-LSNDNHTHVSTRVMGTFGYLA 486
E+ IHRDI A N L+ VA DFG+A+ + ++ M ++
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 487 PEYASSGKLTEKSDVFSFGVMLLELIT 513
PE G T K+D +SFGV+L E+ +
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 111/215 (51%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +LG G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ +++ L+Y H +N + ++++ ++ AKG+
Sbjct: 71 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 124
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFGLAKL + + H + ++
Sbjct: 125 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWM 180
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 181 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 103/216 (47%), Gaps = 13/216 (6%)
Query: 318 FAKSNLLGQGGFGYVHKG-VLPNGKEVAVKSLKTGS----GQGEREFSAEVEIISRVHHR 372
F NLLG+G F V++ + G EVA+K + + G +R EV+I ++ H
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQR-VQNEVKIHCQLKHP 71
Query: 373 HLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE 432
++ L Y LV E N + +L +P + R G+ YLH
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR-HFMHQIITGMLYLHS 130
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYAS 491
I+HRD+ +N+L+ N +ADFGLA +L + H + + GT Y++PE A+
Sbjct: 131 H---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEIAT 185
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSL 527
+SDV+S G M L+ GR P D ++++L
Sbjct: 186 RSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL 221
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 111/215 (51%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +LG G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ +++ L+Y H +N + ++++ ++ AKG+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 130
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFGLAKL + + H + ++
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWM 186
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 19/229 (8%)
Query: 301 FNKSTFTYDELAAATGGFAKSNLLGQGGFGYVHKG----VLPNGKE--VAVKSLKTGSGQ 354
F S + DE + LGQG FG V++G ++ E VAVK++ +
Sbjct: 2 FPSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL 61
Query: 355 GER-EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHL-----HGEN- 407
ER EF E ++ H+V L+G G ++V E +++ L+ +L EN
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 121
Query: 408 --RPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK 465
RP +++A A G+AYL+ + +HR++ A N ++ +F + DFG+ +
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR 178
Query: 466 -LSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
+ ++ + + ++APE G T SD++SFGV+L E+ +
Sbjct: 179 DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 28/215 (13%)
Query: 324 LGQGGFGYV--------HKGVLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRH 373
LG+G FG V K VAVK LK + + + + +E+E++ + H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMD--------------FATRVRI 419
+++L+G C G ++ + S L +L P M+ F V
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 420 ALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRV 478
A+G+ YL + IHRD+ A N+L+ +N +ADFGLA+ ++N ++ +T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 479 MGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 21/207 (10%)
Query: 324 LGQGGFGYVHKGVL------PNGKEVAVKSL-KTGSGQGEREFSAEVEIISRVHHRHLVS 376
LG G FG V++G + P+ +VAVK+L + S Q E +F E IIS+ +H+++V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRP------VMDFATRVRIALGSAKGLAYL 430
+G + R ++ E ++ L+ L E RP + + +A A G YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 431 HEDCHPRIIHRDIKAANILID---DNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGYLA 486
E+ IHRDI A N L+ A + DFG+A+ + ++ M ++
Sbjct: 184 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 240
Query: 487 PEYASSGKLTEKSDVFSFGVMLLELIT 513
PE G T K+D +SFGV+L E+ +
Sbjct: 241 PEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 21/207 (10%)
Query: 324 LGQGGFGYVHKGVL------PNGKEVAVKSL-KTGSGQGEREFSAEVEIISRVHHRHLVS 376
LG G FG V++G + P+ +VAVK+L + S Q E +F E IIS+ +H+++V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRP------VMDFATRVRIALGSAKGLAYL 430
+G + R ++ E ++ L+ L E RP + + +A A G YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVA---DFGLAK-LSNDNHTHVSTRVMGTFGYLA 486
E+ IHRDI A N L+ VA DFG+A+ + ++ M ++
Sbjct: 174 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 230
Query: 487 PEYASSGKLTEKSDVFSFGVMLLELIT 513
PE G T K+D +SFGV+L E+ +
Sbjct: 231 PEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 21/207 (10%)
Query: 324 LGQGGFGYVHKGVL------PNGKEVAVKSL-KTGSGQGEREFSAEVEIISRVHHRHLVS 376
LG G FG V++G + P+ +VAVK+L + S Q E +F E IIS+ +H+++V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRP------VMDFATRVRIALGSAKGLAYL 430
+G + R ++ E ++ L+ L E RP + + +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVA---DFGLAK-LSNDNHTHVSTRVMGTFGYLA 486
E+ IHRDI A N L+ VA DFG+A+ + ++ M ++
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMP 214
Query: 487 PEYASSGKLTEKSDVFSFGVMLLELIT 513
PE G T K+D +SFGV+L E+ +
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 21/207 (10%)
Query: 324 LGQGGFGYVHKGVL------PNGKEVAVKSL-KTGSGQGEREFSAEVEIISRVHHRHLVS 376
LG G FG V++G + P+ +VAVK+L + S Q E +F E IIS+ +H+++V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRP------VMDFATRVRIALGSAKGLAYL 430
+G + R ++ E ++ L+ L E RP + + +A A G YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 431 HEDCHPRIIHRDIKAANILID---DNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGYLA 486
E+ IHRDI A N L+ A + DFG+A+ + ++ M ++
Sbjct: 164 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 220
Query: 487 PEYASSGKLTEKSDVFSFGVMLLELIT 513
PE G T K+D +SFGV+L E+ +
Sbjct: 221 PEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGER---EFSAEVEIISRVHHRHLVSLV 378
+LG GG VH L + ++VAVK L+ + F E + + ++H +V++
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 379 ----GYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
AG +V E+V TL +H E M + + + + L + H++
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQNG 136
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSND--NHTHVSTRVMGTFGYLAPEYASS 492
IIHRD+K ANI+I V DFG+A+ D N + V+GT YL+PE A
Sbjct: 137 ---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
Query: 493 GKLTEKSDVFSFGVMLLELITGRRP 517
+ +SDV+S G +L E++TG P
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGER---EFSAEVEIISRVHHRHLVSLV 378
+LG GG VH L + ++VAVK L+ + F E + + ++H +V++
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 379 ----GYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
AG +V E+V TL +H E M + + + + L + H++
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQNG 136
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSND--NHTHVSTRVMGTFGYLAPEYASS 492
IIHRD+K ANI+I V DFG+A+ D N + V+GT YL+PE A
Sbjct: 137 ---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
Query: 493 GKLTEKSDVFSFGVMLLELITGRRP 517
+ +SDV+S G +L E++TG P
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 100/207 (48%), Gaps = 21/207 (10%)
Query: 324 LGQGGFGYVHKGVL------PNGKEVAVKSL-KTGSGQGEREFSAEVEIISRVHHRHLVS 376
LG G FG V++G + P+ +VAVK+L + S Q E +F E IIS+ +H+++V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRP------VMDFATRVRIALGSAKGLAYL 430
+G + R ++ E ++ L+ L E RP + + +A A G YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVA---DFGLAK-LSNDNHTHVSTRVMGTFGYLA 486
E+ IHRDI A N L+ VA DFG+A+ + + M ++
Sbjct: 175 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 231
Query: 487 PEYASSGKLTEKSDVFSFGVMLLELIT 513
PE G T K+D +SFGV+L E+ +
Sbjct: 232 PEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 100/207 (48%), Gaps = 21/207 (10%)
Query: 324 LGQGGFGYVHKGVL------PNGKEVAVKSL-KTGSGQGEREFSAEVEIISRVHHRHLVS 376
LG G FG V++G + P+ +VAVK+L + S Q E +F E IIS+ +H+++V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRP------VMDFATRVRIALGSAKGLAYL 430
+G + R ++ E ++ L+ L E RP + + +A A G YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVA---DFGLAK-LSNDNHTHVSTRVMGTFGYLA 486
E+ IHRDI A N L+ VA DFG+A+ + + M ++
Sbjct: 198 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 254
Query: 487 PEYASSGKLTEKSDVFSFGVMLLELIT 513
PE G T K+D +SFGV+L E+ +
Sbjct: 255 PEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE----VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLV 378
+G+G FG VH+G+ + + VA+K+ K + RE F E + + H H+V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 379 GYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRI 438
G I ++ E + L L + +D A+ + A + LAYL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESK---RF 132
Query: 439 IHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEK 498
+HRDI A N+L+ + DFGL++ D+ + +++ ++APE + + T
Sbjct: 133 VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 192
Query: 499 SDVFSFGVMLLELIT-GRRP 517
SDV+ FGV + E++ G +P
Sbjct: 193 SDVWMFGVCMWEILMHGVKP 212
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 21/207 (10%)
Query: 324 LGQGGFGYVHKGVL------PNGKEVAVKSL-KTGSGQGEREFSAEVEIISRVHHRHLVS 376
LG G FG V++G + P+ +VAVK+L + S Q E +F E IIS+ +H+++V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRP------VMDFATRVRIALGSAKGLAYL 430
+G + R ++ E ++ L+ L E RP + + +A A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVA---DFGLAK-LSNDNHTHVSTRVMGTFGYLA 486
E+ IHRDI A N L+ VA DFG+A+ + ++ M ++
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 487 PEYASSGKLTEKSDVFSFGVMLLELIT 513
PE G T K+D +SFGV+L E+ +
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 28/215 (13%)
Query: 324 LGQGGFGYV--------HKGVLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRH 373
LG+G FG V K VAVK LK + + + + +E+E++ + H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMD--------------FATRVRI 419
+++L+G C G ++ + S L +L P M+ F V
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 420 ALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRV 478
A+G+ YL + IHRD+ A N+L+ +N +ADFGLA+ ++N ++ +T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 479 MGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE----VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLV 378
+G+G FG VH+G+ + + VA+K+ K + RE F E + + H H+V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 379 GYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRI 438
G I ++ E + L L + +D A+ + A + LAYL R
Sbjct: 458 G-VITENPVWIIMELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESK---RF 512
Query: 439 IHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEK 498
+HRDI A N+L+ + DFGL++ D+ + +++ ++APE + + T
Sbjct: 513 VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 572
Query: 499 SDVFSFGVMLLELIT-GRRP 517
SDV+ FGV + E++ G +P
Sbjct: 573 SDVWMFGVCMWEILMHGVKP 592
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 109/218 (50%), Gaps = 34/218 (15%)
Query: 324 LGQGGFGYVHKGVL----------PNG-KEVAVKSLKTGSGQGE-REFSAEVEIISRV-H 370
LG+G FG V VL PN +VAVK LK+ + + + + +E+E++ +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 371 HRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATR-------------- 416
H+++++L+G C G ++ E+ S L +L P ++++
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 417 VRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVS 475
V A A+G+ YL + IHRD+ A N+L+ ++ +ADFGLA+ + + ++ +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 476 TRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
T ++APE T +SDV+SFGV+L E+ T
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 19/206 (9%)
Query: 324 LGQGGFGYVHKG----VLPNGKE--VAVKSLKTGSGQGER-EFSAEVEIISRVHHRHLVS 376
LGQG FG V++G ++ E VAVK++ + ER EF E ++ H+V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHL-----HGEN---RPVMDFATRVRIALGSAKGLA 428
L+G G ++V E +++ L+ +L EN RP +++A A G+A
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 429 YLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGYLAP 487
YL+ + +HRD+ A N ++ +F + DFG+ + + ++ + + ++AP
Sbjct: 144 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 488 EYASSGKLTEKSDVFSFGVMLLELIT 513
E G T SD++SFGV+L E+ +
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 109/218 (50%), Gaps = 34/218 (15%)
Query: 324 LGQGGFGYVHKGVL----------PNG-KEVAVKSLKTGSGQGE-REFSAEVEIISRV-H 370
LG+G FG V VL PN +VAVK LK+ + + + + +E+E++ +
Sbjct: 28 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 84
Query: 371 HRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATR-------------- 416
H+++++L+G C G ++ E+ S L +L P ++++
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 417 VRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVS 475
V A A+G+ YL + IHRD+ A N+L+ ++ +ADFGLA+ + + ++ +
Sbjct: 145 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 476 TRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
T ++APE T +SDV+SFGV+L E+ T
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 109/218 (50%), Gaps = 34/218 (15%)
Query: 324 LGQGGFGYVHKGVL----------PNG-KEVAVKSLKTGSGQGE-REFSAEVEIISRV-H 370
LG+G FG V VL PN +VAVK LK+ + + + + +E+E++ +
Sbjct: 25 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 81
Query: 371 HRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATR-------------- 416
H+++++L+G C G ++ E+ S L +L P ++++
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 417 VRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVS 475
V A A+G+ YL + IHRD+ A N+L+ ++ +ADFGLA+ + + ++ +
Sbjct: 142 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 476 TRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
T ++APE T +SDV+SFGV+L E+ T
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 109/218 (50%), Gaps = 34/218 (15%)
Query: 324 LGQGGFGYVHKGVL----------PNG-KEVAVKSLKTGSGQGE-REFSAEVEIISRV-H 370
LG+G FG V VL PN +VAVK LK+ + + + + +E+E++ +
Sbjct: 29 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 85
Query: 371 HRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATR-------------- 416
H+++++L+G C G ++ E+ S L +L P ++++
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 417 VRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVS 475
V A A+G+ YL + IHRD+ A N+L+ ++ +ADFGLA+ + + ++ +
Sbjct: 146 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 476 TRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
T ++APE T +SDV+SFGV+L E+ T
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 34/218 (15%)
Query: 324 LGQGGFGYVHKGVL----------PNG-KEVAVKSLKTGSGQGE-REFSAEVEIISRV-H 370
LG+G FG V VL PN +VAVK LK+ + + + + +E+E++ +
Sbjct: 21 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 77
Query: 371 HRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATR-------------- 416
H+++++L+G C G ++ E+ S L +L P +++
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 417 VRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVS 475
V A A+G+ YL + IHRD+ A N+L+ ++ +ADFGLA+ + + ++ +
Sbjct: 138 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 476 TRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
T ++APE T +SDV+SFGV+L E+ T
Sbjct: 195 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 111/215 (51%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +LG G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ +++ L+Y H +N + ++++ ++ A+G+
Sbjct: 74 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AEGM 127
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFGLAKL + + H + ++
Sbjct: 128 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWM 183
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 184 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 111/215 (51%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +L G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ ++++ L+Y H +N + ++++ ++ AKG+
Sbjct: 84 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 137
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFGLAKL + + H + ++
Sbjct: 138 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWM 193
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 109/218 (50%), Gaps = 34/218 (15%)
Query: 324 LGQGGFGYVHKGVL----------PNG-KEVAVKSLKTGSGQGE-REFSAEVEIISRV-H 370
LG+G FG V VL PN +VAVK LK+ + + + + +E+E++ +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 371 HRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATR-------------- 416
H+++++L+G C G ++ E+ S L +L P ++++
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 417 VRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVS 475
V A A+G+ YL + IHRD+ A N+L+ ++ +ADFGLA+ + + ++ +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 476 TRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
T ++APE T +SDV+SFGV+L E+ T
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 111/215 (51%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +LG G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ ++++ L+Y H +N + ++++ ++ AKG+
Sbjct: 79 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 132
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFG AKL + + H + ++
Sbjct: 133 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-PIKWM 188
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 34/218 (15%)
Query: 324 LGQGGFGYVHKGVL----------PNG-KEVAVKSLKTGSGQGE-REFSAEVEIISRV-H 370
LG+G FG V VL PN +VAVK LK+ + + + + +E+E++ +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 371 HRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATR-------------- 416
H+++++L+G C G ++ E+ S L +L P +++
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 417 VRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVS 475
V A A+G+ YL + IHRD+ A N+L+ ++ +ADFGLA+ + + ++ +
Sbjct: 153 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 476 TRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
T ++APE T +SDV+SFGV+L E+ T
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +L G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ +++ L+Y H +N + ++++ ++ AKG+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 130
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFGLAKL + + H + ++
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWM 186
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 111/215 (51%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +LG G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ ++++ L+Y H +N + ++++ ++ AKG+
Sbjct: 79 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 132
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFG AKL + + H + ++
Sbjct: 133 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-PIKWM 188
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +L G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ +++ L+Y H +N + ++++ ++ AKG+
Sbjct: 84 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 137
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFGLAKL + + H + ++
Sbjct: 138 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWM 193
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 28/214 (13%)
Query: 321 SNLLGQGGFGYVHKGVLPNG---KEVAVKSLKT-GSGQGEREFSAEVEIISRV-HHRHLV 375
+++G+G FG V K + + A+K +K S R+F+ E+E++ ++ HH +++
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHG----ENRPVMDFATRVRIALGS-------- 423
+L+G C G L E+ + L L E P A L S
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 424 --AKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGT 481
A+G+ YL + + IHRD+ A NIL+ +N+ A +ADFG LS +V + MG
Sbjct: 140 DVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG---LSRGQEVYVK-KTMGR 192
Query: 482 FG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++A E + T SDV+S+GV+L E+++
Sbjct: 193 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 109/218 (50%), Gaps = 34/218 (15%)
Query: 324 LGQGGFGYVHKGVL----------PNG-KEVAVKSLKTGSGQGE-REFSAEVEIISRV-H 370
LG+G FG V VL PN +VAVK LK+ + + + + +E+E++ +
Sbjct: 77 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 371 HRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATR-------------- 416
H+++++L+G C G ++ E+ S L +L P ++++
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 417 VRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVS 475
V A A+G+ YL + IHRD+ A N+L+ ++ +ADFGLA+ + + ++ +
Sbjct: 194 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 476 TRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
T ++APE T +SDV+SFGV+L E+ T
Sbjct: 251 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +LG G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ +++ L+Y H +N + ++++ ++ AKG+
Sbjct: 79 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 132
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFG AKL + + H + ++
Sbjct: 133 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-PIKWM 188
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 28/214 (13%)
Query: 321 SNLLGQGGFGYVHKGVLPNG---KEVAVKSLKT-GSGQGEREFSAEVEIISRV-HHRHLV 375
+++G+G FG V K + + A+K +K S R+F+ E+E++ ++ HH +++
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHG----ENRPVMDFATRVRIALGS-------- 423
+L+G C G L E+ + L L E P A L S
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 424 --AKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGT 481
A+G+ YL + + IHRD+ A NIL+ +N+ A +ADFG LS +V + MG
Sbjct: 150 DVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG---LSRGQEVYVK-KTMGR 202
Query: 482 FG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++A E + T SDV+S+GV+L E+++
Sbjct: 203 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 111/215 (51%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +LG G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ ++++ L+Y H +N + ++++ ++ AKG+
Sbjct: 81 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 134
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFG AKL + + H + ++
Sbjct: 135 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-PIKWM 190
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +LG G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ +++ L+Y H +N + ++++ ++ AKG+
Sbjct: 84 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 137
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFG AKL + + H + ++
Sbjct: 138 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-PIKWM 193
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +LG G FG V+KG+ +P G++V A+K L+ S + +E E +++ V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ +++ L+Y H +N + ++++ ++ AKG+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 130
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFG AKL + + H + ++
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-PIKWM 186
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGER---EFSAEVEIISRVHHRHLVSLV 378
+LG GG VH L ++VAVK L+ + F E + + ++H +V++
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 379 GY----CIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
AG +V E+V TL +H E M + + + + L + H++
Sbjct: 79 ATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQNG 136
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSND--NHTHVSTRVMGTFGYLAPEYASS 492
IIHRD+K ANI+I V DFG+A+ D N + V+GT YL+PE A
Sbjct: 137 ---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
Query: 493 GKLTEKSDVFSFGVMLLELITGRRP 517
+ +SDV+S G +L E++TG P
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGER---EFSAEVEIISRVHHRHLVSLV 378
+LG GG VH L ++VAVK L+ + F E + + ++H +V++
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 379 ----GYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
AG +V E+V TL +H E M + + + + L + H++
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQNG 136
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSND--NHTHVSTRVMGTFGYLAPEYASS 492
IIHRD+K ANI+I V DFG+A+ D N + V+GT YL+PE A
Sbjct: 137 ---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
Query: 493 GKLTEKSDVFSFGVMLLELITGRRP 517
+ +SDV+S G +L E++TG P
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEV----AVKSLKTG-SGQGEREFSAEVEIISRVHH 371
F K +LG G FG V+KG+ +P G++V A+ L+ S + +E E +++ V +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY-HLHGEN---RPVMDFATRVRIALGSAKGL 427
H+ L+G C+ +++ L+Y H +N + ++++ ++ AKG+
Sbjct: 111 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 164
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYL 485
YL + R++HRD+ A N+L+ + DFGLAKL + + H + ++
Sbjct: 165 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWM 220
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 519
A E T +SDV+S+GV + EL+T G +P D
Sbjct: 221 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 9/202 (4%)
Query: 318 FAKSNLLGQGGFGYVHKGVLPNGKEV-AVKSLK-TGSGQGEREFSAEVEIISRVHHRHLV 375
F K +G+G FG V KG+ ++V A+K + + + E+ ++S+ ++
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G + G + ++ E++ + L AT ++ L KGL YLH +
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEIL---KGLDYLHSE-- 139
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKL 495
+ IHRDIKAAN+L+ + + +ADFG+A D +T V GT ++APE
Sbjct: 140 -KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQSAY 197
Query: 496 TEKSDVFSFGVMLLELITGRRP 517
K+D++S G+ +EL G P
Sbjct: 198 DSKADIWSLGITAIELAKGEPP 219
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 38/231 (16%)
Query: 318 FAKSNL-----LGQGGFGYVHK----GVLPNGK--EVAVKSLKTGSGQGERE-FSAEVEI 365
F + NL LG G FG V G+ G +VAVK LK + ERE +E+++
Sbjct: 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKM 101
Query: 366 ISRV-HHRHLVSLVGYCIAGGQRMLVYEFV----------------SNKTLEYHLHG--- 405
++++ H ++V+L+G C G L++E+ S +EY
Sbjct: 102 MTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLE 161
Query: 406 --ENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGL 463
E+ V+ F + A AKG+ +L +HRD+ A N+L+ + DFGL
Sbjct: 162 EEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGL 218
Query: 464 AK-LSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
A+ + +D++ V ++APE G T KSDV+S+G++L E+ +
Sbjct: 219 ARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 93/204 (45%), Gaps = 15/204 (7%)
Query: 324 LGQGGFGYVHKGVL--PNGK--EVAVKSLK---TGSGQGEREFSAEVEIISRVHHRHLVS 376
LG G FG V +G P+GK VAVK LK + +F EV + + HR+L+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
L G + +M V E +L L + T R A+ A+G+ YL
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESK--- 140
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYLAPEYASSGK 494
R IHRD+ A N+L+ + DFGL + ND+H + F + APE +
Sbjct: 141 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT 200
Query: 495 LTEKSDVFSFGVMLLELIT-GRRP 517
+ SD + FGV L E+ T G+ P
Sbjct: 201 FSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 93/204 (45%), Gaps = 15/204 (7%)
Query: 324 LGQGGFGYVHKGVL--PNGK--EVAVKSLK---TGSGQGEREFSAEVEIISRVHHRHLVS 376
LG G FG V +G P+GK VAVK LK + +F EV + + HR+L+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
L G + +M V E +L L + T R A+ A+G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESK--- 130
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYLAPEYASSGK 494
R IHRD+ A N+L+ + DFGL + ND+H + F + APE +
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT 190
Query: 495 LTEKSDVFSFGVMLLELIT-GRRP 517
+ SD + FGV L E+ T G+ P
Sbjct: 191 FSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGER---EFSAEVEIISRVHHRHLVSLV 378
+LG GG VH L ++VAVK L+ + F E + + ++H +V++
Sbjct: 36 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 95
Query: 379 ----GYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
AG +V E+V TL +H E M + + + + L + H++
Sbjct: 96 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQNG 153
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSND--NHTHVSTRVMGTFGYLAPEYASS 492
IIHRD+K ANI+I V DFG+A+ D N + V+GT YL+PE A
Sbjct: 154 ---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 210
Query: 493 GKLTEKSDVFSFGVMLLELITGRRP 517
+ +SDV+S G +L E++TG P
Sbjct: 211 DSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 9/204 (4%)
Query: 318 FAKSNLLGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQ---GEREFSAEVEIISRVHHRH 373
F + +LG+GGFG V V GK A K L+ + GE E +I+ +V+ R
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHED 433
+VSL LV ++ L++H++ + A V A GL LH +
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 434 CHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSG 493
RI++RD+K NIL+DD+ ++D GLA + T + RV GT GY+APE +
Sbjct: 306 ---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEVVKNE 360
Query: 494 KLTEKSDVFSFGVMLLELITGRRP 517
+ T D ++ G +L E+I G+ P
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 9/204 (4%)
Query: 318 FAKSNLLGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQ---GEREFSAEVEIISRVHHRH 373
F + +LG+GGFG V V GK A K L+ + GE E +I+ +V+ R
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHED 433
+VSL LV ++ L++H++ + A V A GL LH +
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 434 CHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSG 493
RI++RD+K NIL+DD+ ++D GLA + T + RV GT GY+APE +
Sbjct: 306 ---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEVVKNE 360
Query: 494 KLTEKSDVFSFGVMLLELITGRRP 517
+ T D ++ G +L E+I G+ P
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 93/204 (45%), Gaps = 15/204 (7%)
Query: 324 LGQGGFGYVHKGVL--PNGK--EVAVKSLK---TGSGQGEREFSAEVEIISRVHHRHLVS 376
LG G FG V +G P+GK VAVK LK + +F EV + + HR+L+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
L G + +M V E +L L + T R A+ A+G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESK--- 134
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYLAPEYASSGK 494
R IHRD+ A N+L+ + DFGL + ND+H + F + APE +
Sbjct: 135 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 194
Query: 495 LTEKSDVFSFGVMLLELIT-GRRP 517
+ SD + FGV L E+ T G+ P
Sbjct: 195 FSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 93/204 (45%), Gaps = 15/204 (7%)
Query: 324 LGQGGFGYVHKGVL--PNGK--EVAVKSLK---TGSGQGEREFSAEVEIISRVHHRHLVS 376
LG G FG V +G P+GK VAVK LK + +F EV + + HR+L+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
L G + +M V E +L L + T R A+ A+G+ YL
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESK--- 140
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYLAPEYASSGK 494
R IHRD+ A N+L+ + DFGL + ND+H + F + APE +
Sbjct: 141 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 200
Query: 495 LTEKSDVFSFGVMLLELIT-GRRP 517
+ SD + FGV L E+ T G+ P
Sbjct: 201 FSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 93/204 (45%), Gaps = 15/204 (7%)
Query: 324 LGQGGFGYVHKGVL--PNGK--EVAVKSLK---TGSGQGEREFSAEVEIISRVHHRHLVS 376
LG G FG V +G P+GK VAVK LK + +F EV + + HR+L+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
L G + +M V E +L L + T R A+ A+G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESK--- 130
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYLAPEYASSGK 494
R IHRD+ A N+L+ + DFGL + ND+H + F + APE +
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 190
Query: 495 LTEKSDVFSFGVMLLELIT-GRRP 517
+ SD + FGV L E+ T G+ P
Sbjct: 191 FSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 93/204 (45%), Gaps = 15/204 (7%)
Query: 324 LGQGGFGYVHKGVL--PNGK--EVAVKSLK---TGSGQGEREFSAEVEIISRVHHRHLVS 376
LG G FG V +G P+GK VAVK LK + +F EV + + HR+L+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
L G + +M V E +L L + T R A+ A+G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESK--- 134
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYLAPEYASSGK 494
R IHRD+ A N+L+ + DFGL + ND+H + F + APE +
Sbjct: 135 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 194
Query: 495 LTEKSDVFSFGVMLLELIT-GRRP 517
+ SD + FGV L E+ T G+ P
Sbjct: 195 FSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 93/204 (45%), Gaps = 15/204 (7%)
Query: 324 LGQGGFGYVHKGVL--PNGK--EVAVKSLK---TGSGQGEREFSAEVEIISRVHHRHLVS 376
LG G FG V +G P+GK VAVK LK + +F EV + + HR+L+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
L G + +M V E +L L + T R A+ A+G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESK--- 130
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYLAPEYASSGK 494
R IHRD+ A N+L+ + DFGL + ND+H + F + APE +
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 190
Query: 495 LTEKSDVFSFGVMLLELIT-GRRP 517
+ SD + FGV L E+ T G+ P
Sbjct: 191 FSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 324 LGQGGFGYVHKG------VLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRHLV 375
LG+G FG V + + VAVK LK G+ E R +E++I+ + HH ++V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGENRPVM---------DFATR---VRIALG 422
+L+G C GG M++ EF L +L + + DF T + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 423 SAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGT 481
AKG+ +L + IHRD+ A NIL+ + + DFGLA+ + D
Sbjct: 157 VAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 482 FGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+SFGV+L E+ +
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 102/214 (47%), Gaps = 39/214 (18%)
Query: 322 NLLGQGGFGYVHKGVL----PNGKEVAVKSL-KTGSGQGEREFSAEVEIISRVHHRHLVS 376
++G+G FG V+ G N + A+KSL + Q F E ++ ++H ++++
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGE----------NRPVMDFATRVRIALGSAKG 426
L+G ML E + + L Y HG+ N V D + L A+G
Sbjct: 87 LIGI-------MLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL---ISFGLQVARG 136
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-------LSNDNHTHVSTRVM 479
+ YL E + +HRD+ A N ++D++F VADFGLA+ S H H V
Sbjct: 137 MEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVK 193
Query: 480 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
T A E + + T KSDV+SFGV+L EL+T
Sbjct: 194 WT----ALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 324 LGQGGFGYVHKG------VLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRHLV 375
LG+G FG V + + VAVK LK G+ E R +E++I+ + HH ++V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFAT-------------RVRIAL 421
+L+G C GG M++ EF L +L + + + T + +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 422 GSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMG 480
AKG+ +L + IHRD+ A NIL+ + + DFGLA+ + D
Sbjct: 156 QVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 481 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+SFGV+L E+ +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 107/221 (48%), Gaps = 14/221 (6%)
Query: 318 FAKSNLLGQGGFGYVHKGVLPNGKEV-----AVKSLKTGSGQGEREFSAEVEIISRVHHR 372
+ + LG+GGF ++ + KEV KS+ Q E+ S E+ I + +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLDNP 102
Query: 373 HLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE 432
H+V G+ +V E ++L LH + V + R + + +G+ YLH
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMR-QTIQGVQYLHN 160
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYAS 491
+ R+IHRD+K N+ ++D+ + + DFGLA K+ D + + GT Y+APE
Sbjct: 161 N---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--LCGTPNYIAPEVLC 215
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWAR 532
+ + D++S G +L L+ G+ P + + ++++ + +
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKK 256
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 22/206 (10%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQG-----EREFSAEVEIISRVHHRHLVSLV 378
LG G FG V KG K V ++K + + E AE ++ ++ + ++V ++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 379 GYCIAGGQRMLVYEFVS----NKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
G C A MLV E NK L+ + H +++ +++ +V + G+ YL E
Sbjct: 93 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLEES- 144
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYLAPEYASS 492
+HRD+ A N+L+ A ++DFGL+K +++N+ T + APE +
Sbjct: 145 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 202
Query: 493 GKLTEKSDVFSFGVMLLELIT-GRRP 517
K + KSDV+SFGV++ E + G++P
Sbjct: 203 YKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 27/214 (12%)
Query: 324 LGQGGFGYVHKG------VLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRHLV 375
LG+G FG V + + VAVK LK G+ E R +E++I+ + HH ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGENRPVM-----------DFATRVRIALGS 423
+L+G C GG M++ EF L +L + + DF T + S
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 424 ---AKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVM 479
AKG+ +L + IHRD+ A NIL+ + + DFGLA+ + D
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 480 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+SFGV+L E+ +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 23/210 (10%)
Query: 324 LGQGGFGYVHKG------VLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRHLV 375
LG+G FG V + + VAVK LK G+ E R +E++I+ + HH ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGENRPVM-------DFATRVRIALGS---A 424
+L+G C GG M++ EF L +L + + DF T + S A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVST-RVMGTFG 483
KG+ +L + IHRD+ A NIL+ + + DFGLA+ + +V
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 484 YLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+SFGV+L E+ +
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 22/206 (10%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQG-----EREFSAEVEIISRVHHRHLVSLV 378
LG G FG V KG K V ++K + + E AE ++ ++ + ++V ++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 379 GYCIAGGQRMLVYEFVS----NKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
G C A MLV E NK L+ + H +++ +++ +V + G+ YL E
Sbjct: 437 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLEES- 488
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYLAPEYASS 492
+HRD+ A N+L+ A ++DFGL+K +++N+ T + APE +
Sbjct: 489 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 546
Query: 493 GKLTEKSDVFSFGVMLLELIT-GRRP 517
K + KSDV+SFGV++ E + G++P
Sbjct: 547 YKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 105/214 (49%), Gaps = 28/214 (13%)
Query: 321 SNLLGQGGFGYVHKGVLPNG---KEVAVKSLKT-GSGQGEREFSAEVEIISRV-HHRHLV 375
+++G+G FG V K + + A+K +K S R+F+ E+E++ ++ HH +++
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHG----ENRPVMDFATRVRIALGS-------- 423
+L+G C G L E+ + L L E P A L S
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 424 --AKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGT 481
A+G+ YL + + IHR++ A NIL+ +N+ A +ADFG LS +V + MG
Sbjct: 147 DVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFG---LSRGQEVYVK-KTMGR 199
Query: 482 FG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++A E + T SDV+S+GV+L E+++
Sbjct: 200 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 22/206 (10%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQG-----EREFSAEVEIISRVHHRHLVSLV 378
LG G FG V KG K V ++K + + E AE ++ ++ + ++V ++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 379 GYCIAGGQRMLVYEFVS----NKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
G C A MLV E NK L+ + H +++ +++ +V + G+ YL E
Sbjct: 95 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLEES- 146
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYLAPEYASS 492
+HRD+ A N+L+ A ++DFGL+K +++N+ T + APE +
Sbjct: 147 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 204
Query: 493 GKLTEKSDVFSFGVMLLELIT-GRRP 517
K + KSDV+SFGV++ E + G++P
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 22/206 (10%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQG-----EREFSAEVEIISRVHHRHLVSLV 378
LG G FG V KG K V ++K + + E AE ++ ++ + ++V ++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 379 GYCIAGGQRMLVYEFVS----NKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
G C A MLV E NK L+ + H +++ +++ +V + G+ YL E
Sbjct: 95 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLEES- 146
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYLAPEYASS 492
+HRD+ A N+L+ A ++DFGL+K +++N+ T + APE +
Sbjct: 147 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 204
Query: 493 GKLTEKSDVFSFGVMLLELIT-GRRP 517
K + KSDV+SFGV++ E + G++P
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 117/238 (49%), Gaps = 51/238 (21%)
Query: 319 AKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLV 378
A +G+G +G V +G L +G+ VAVK S + E+ + E EI + V RH +++
Sbjct: 11 ALVECVGKGRYGEVWRG-LWHGESVAVKIF---SSRDEQSWFRETEIYNTVLLRH-DNIL 65
Query: 379 GYCIA-------GGQRMLV---------YEFVSNKTLEYHLHGENRPVMDFATRVRIALG 422
G+ + Q L+ Y+F+ +TLE HL +R+A+
Sbjct: 66 GFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA------------LRLAVS 113
Query: 423 SAKGLAYLHEDC-----HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHV--- 474
+A GLA+LH + P I HRD K+ N+L+ N + +AD GLA + + ++
Sbjct: 114 AACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIG 173
Query: 475 -STRVMGTFGYLAPEYASSGKLTE------KSDVFSFGVMLLELITGRRPVDMTMMED 525
+ RV GT Y+APE T+ +D+++FG++L E+ RR + ++ED
Sbjct: 174 NNPRV-GTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTIVNGIVED 228
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 110/251 (43%), Gaps = 21/251 (8%)
Query: 324 LGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRVHHRHLVSLVG 379
LG+G FG V+ N K + A+K L + E + EVEI S + H +++ L G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
Y + L+ E+ T+ L ++ D A L+Y H ++I
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK---KVI 130
Query: 440 HRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTR--VMGTFGYLAPEYASSGKLTE 497
HRDIK N+L+ E +ADFG + H S R + GT YL PE E
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRAALCGTLDYLPPEMIEGRMHDE 185
Query: 498 KSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG---LVDPRLEH 554
K D++S GV+ E + G+ P + +D+ +R + D + +G L+ L+H
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISR--VEFTFPDFVTEGARDLISRLLKH 243
Query: 555 NYVPHEMARLV 565
N M R V
Sbjct: 244 NPSQRPMLREV 254
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 22/206 (10%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQG-----EREFSAEVEIISRVHHRHLVSLV 378
LG G FG V KG K V ++K + + E AE ++ ++ + ++V ++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 379 GYCIAGGQRMLVYEFVS----NKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
G C A MLV E NK L+ + H +++ +++ +V + G+ YL E
Sbjct: 438 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLEES- 489
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYLAPEYASS 492
+HRD+ A N+L+ A ++DFGL+K +++N+ T + APE +
Sbjct: 490 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 547
Query: 493 GKLTEKSDVFSFGVMLLELIT-GRRP 517
K + KSDV+SFGV++ E + G++P
Sbjct: 548 YKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 23/210 (10%)
Query: 324 LGQGGFGYVHKG------VLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRHLV 375
LG+G FG V + + VAVK LK G+ E R +E++I+ + HH ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGENRPVM-------DFATR---VRIALGSA 424
+L+G C GG M++ EF L +L + + DF T + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVST-RVMGTFG 483
KG+ +L + IHRD+ A NIL+ + + DFGLA+ + +V
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 484 YLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+SFGV+L E+ +
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 27/214 (12%)
Query: 324 LGQGGFGYVHKG------VLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRHLV 375
LG+G FG V + + VAVK LK G+ E R +E++I+ + HH ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGENRPVM-----------DFATRVRIALGS 423
+L+G C GG M++ EF L +L + + DF T + S
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 424 ---AKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVM 479
AKG+ +L + IHRD+ A NIL+ + + DFGLA+ + D
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 480 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+SFGV+L E+ +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 14/221 (6%)
Query: 318 FAKSNLLGQGGFGYVHKGVLPNGKEV-----AVKSLKTGSGQGEREFSAEVEIISRVHHR 372
+ + LG+GGF ++ + KEV KS+ Q E+ S E+ I + +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLDNP 102
Query: 373 HLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE 432
H+V G+ +V E ++L LH + V + R + + +G+ YLH
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMR-QTIQGVQYLHN 160
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYAS 491
+ R+IHRD+K N+ ++D+ + + DFGLA K+ D + GT Y+APE
Sbjct: 161 N---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKXLCGTPNYIAPEVLC 215
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWAR 532
+ + D++S G +L L+ G+ P + + ++++ + +
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKK 256
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 14/221 (6%)
Query: 318 FAKSNLLGQGGFGYVHKGVLPNGKEV-----AVKSLKTGSGQGEREFSAEVEIISRVHHR 372
+ + LG+GGF ++ + KEV KS+ Q E+ S E+ I + +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLDNP 102
Query: 373 HLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE 432
H+V G+ +V E ++L LH + V + R + + +G+ YLH
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMR-QTIQGVQYLHN 160
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYAS 491
+ R+IHRD+K N+ ++D+ + + DFGLA K+ D + GT Y+APE
Sbjct: 161 N---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPNYIAPEVLC 215
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWAR 532
+ + D++S G +L L+ G+ P + + ++++ + +
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKK 256
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 22/206 (10%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQG-----EREFSAEVEIISRVHHRHLVSLV 378
LG G FG V KG K V ++K + + E AE ++ ++ + ++V ++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 379 GYCIAGGQRMLVYEFVS----NKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
G C A MLV E NK L+ + H +++ +++ +V + G+ YL E
Sbjct: 73 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLEES- 124
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYLAPEYASS 492
+HRD+ A N+L+ A ++DFGL+K +++N+ T + APE +
Sbjct: 125 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 182
Query: 493 GKLTEKSDVFSFGVMLLELIT-GRRP 517
K + KSDV+SFGV++ E + G++P
Sbjct: 183 YKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 22/206 (10%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQG-----EREFSAEVEIISRVHHRHLVSLV 378
LG G FG V KG K V ++K + + E AE ++ ++ + ++V ++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 379 GYCIAGGQRMLVYEFVS----NKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
G C A MLV E NK L+ + H +++ +++ +V + G+ YL E
Sbjct: 85 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLEES- 136
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYLAPEYASS 492
+HRD+ A N+L+ A ++DFGL+K +++N+ T + APE +
Sbjct: 137 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 194
Query: 493 GKLTEKSDVFSFGVMLLELIT-GRRP 517
K + KSDV+SFGV++ E + G++P
Sbjct: 195 YKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 22/206 (10%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQG-----EREFSAEVEIISRVHHRHLVSLV 378
LG G FG V KG K V ++K + + E AE ++ ++ + ++V ++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 379 GYCIAGGQRMLVYEFVS----NKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
G C A MLV E NK L+ + H +++ +++ +V + G+ YL E
Sbjct: 79 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLEES- 130
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYLAPEYASS 492
+HRD+ A N+L+ A ++DFGL+K +++N+ T + APE +
Sbjct: 131 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 188
Query: 493 GKLTEKSDVFSFGVMLLELIT-GRRP 517
K + KSDV+SFGV++ E + G++P
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 109/233 (46%), Gaps = 42/233 (18%)
Query: 318 FAKSNL-----LGQGGFGYVHKGVLPNGK------EVAVKSLKTGSGQGE-REFSAEVEI 365
F + NL LG+G FG V K + K VAVK LK + E R+ +E +
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 366 ISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPV--------------- 410
+ +V+H H++ L G C G +L+ E+ +L L E+R V
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLR-ESRKVGPGYLGSGGSRNSSS 138
Query: 411 --------MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFG 462
+ + A ++G+ YL E +++HRD+ A NIL+ + + ++DFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 463 LAKLSNDNHTHVSTRVMGTF--GYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
L++ + ++V R G ++A E T +SDV+SFGV+L E++T
Sbjct: 196 LSRDVYEEDSYVK-RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 109/249 (43%), Gaps = 17/249 (6%)
Query: 324 LGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRVHHRHLVSLVG 379
LG+G FG V+ K + A+K L + E + EVEI S + H +++ L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
Y + L+ E+ T+ L ++ D A L+Y H R+I
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK---RVI 156
Query: 440 HRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKS 499
HRDIK N+L+ E +ADFG + + + T + GT YL PE EK
Sbjct: 157 HRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDEKV 213
Query: 500 DVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG---LVDPRLEHNY 556
D++S GV+ E + G+ P + +++ +R + D + +G L+ L+HN
Sbjct: 214 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGARDLISRLLKHNP 271
Query: 557 VPHEMARLV 565
M R V
Sbjct: 272 SQRPMLREV 280
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 22/206 (10%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQG-----EREFSAEVEIISRVHHRHLVSLV 378
LG G FG V KG K V ++K + + E AE ++ ++ + ++V ++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 379 GYCIAGGQRMLVYEFVS----NKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
G C A MLV E NK L+ + H +++ +++ +V + G+ YL E
Sbjct: 75 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLEES- 126
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYLAPEYASS 492
+HRD+ A N+L+ A ++DFGL+K +++N+ T + APE +
Sbjct: 127 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 184
Query: 493 GKLTEKSDVFSFGVMLLELIT-GRRP 517
K + KSDV+SFGV++ E + G++P
Sbjct: 185 YKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 111/259 (42%), Gaps = 17/259 (6%)
Query: 314 ATGGFAKSNLLGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRV 369
A F LG+G FG V+ K + A+K L + E + EVEI S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 370 HHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
H +++ L GY + L+ E+ T+ L ++ D A L+Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 123
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
H R+IHRDIK N+L+ E +ADFG + + + T + GT YL PE
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTELCGTLDYLPPEM 177
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG--- 546
EK D++S GV+ E + G+ P + +++ +R + D + +G
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGARD 235
Query: 547 LVDPRLEHNYVPHEMARLV 565
L+ L+HN M R V
Sbjct: 236 LISRLLKHNPSQRPMLREV 254
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 100/214 (46%), Gaps = 27/214 (12%)
Query: 324 LGQGGFGYVHKG------VLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRHLV 375
LG+G FG V + + VAVK LK G+ E R +E++I+ + HH ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGENRPVM-----------DFATR---VRIA 420
+L+G C GG M++ EF L +L + + DF T + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 421 LGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVM 479
AKG+ +L + IHRD+ A NIL+ + + DFGLA+ + D
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 480 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+SFGV+L E+ +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 27/214 (12%)
Query: 324 LGQGGFGYVHKG------VLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRHLV 375
LG+G FG V + + VAVK LK G+ E R +E++I+ + HH ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGENRPVM-----------DFATRVRIALGS 423
+L+G C GG M++ EF L +L + + DF T + S
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 424 ---AKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVM 479
AKG+ +L + IHRD+ A NIL+ + + DFGLA+ + D
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 480 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+SFGV+L E+ +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 14/221 (6%)
Query: 318 FAKSNLLGQGGFGYVHKGVLPNGKEV-----AVKSLKTGSGQGEREFSAEVEIISRVHHR 372
+ + LG+GGF ++ + KEV KS+ Q E+ S E+ I + +
Sbjct: 28 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLDNP 86
Query: 373 HLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE 432
H+V G+ +V E ++L LH + V + R + + +G+ YLH
Sbjct: 87 HVVGFHGFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMR-QTIQGVQYLHN 144
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYAS 491
+ R+IHRD+K N+ ++D+ + + DFGLA K+ D + GT Y+APE
Sbjct: 145 N---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPNYIAPEVLC 199
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWAR 532
+ + D++S G +L L+ G+ P + + ++++ + +
Sbjct: 200 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKK 240
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 111/261 (42%), Gaps = 21/261 (8%)
Query: 314 ATGGFAKSNLLGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRV 369
A F LG+G FG V+ K + A+K L + E + EVEI S +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 370 HHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
H +++ L GY + L+ E+ T+ L ++ D A L+Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 149
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTR--VMGTFGYLAP 487
H R+IHRDIK N+L+ E +ADFG + H S R + GT YL P
Sbjct: 150 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-----HAPSSRRDDLCGTLDYLPP 201
Query: 488 EYASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG- 546
E EK D++S GV+ E + G+ P + +++ +R + D + +G
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGA 259
Query: 547 --LVDPRLEHNYVPHEMARLV 565
L+ L+HN M R V
Sbjct: 260 RDLISRLLKHNPSQRPMLREV 280
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 27/214 (12%)
Query: 324 LGQGGFGYVHKG------VLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRHLV 375
LG+G FG V + + VAVK LK G+ E R +E++I+ + HH ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGENRPVM-----------DFATRVRIALGS 423
+L+G C GG M++ EF L +L + + DF T + S
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 424 ---AKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVST-RVM 479
AKG+ +L + IHRD+ A NIL+ + + DFGLA+ + +V
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 480 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+SFGV+L E+ +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 13/203 (6%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRVHH-RHLVSLVGY 380
+G+G +G V+K V P+G+ +AVK +++ + E ++ +++++ R ++V G
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 381 CIAGGQRMLVYEFVSNKTLEYH--LHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRI 438
G + E +S +++ ++ V+ +I L + K L +L E+ +I
Sbjct: 90 LFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KI 147
Query: 439 IHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY----ASSGK 494
IHRDIK +NIL+D + + DFG++ D + TR G Y+APE AS
Sbjct: 148 IHRDIKPSNILLDRSGNIKLCDFGISGQLVD--SIAKTRDAGCRPYMAPERIDPSASRQG 205
Query: 495 LTEKSDVFSFGVMLLELITGRRP 517
+SDV+S G+ L EL TGR P
Sbjct: 206 YDVRSDVWSLGITLYELATGRFP 228
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 27/214 (12%)
Query: 324 LGQGGFGYVHKG------VLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRHLV 375
LG+G FG V + + VAVK LK G+ E R +E++I+ + HH ++V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGENRPVM-----------DFATRVRIALGS 423
+L+G C GG M++ EF L +L + + DF T + S
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 424 ---AKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVST-RVM 479
AKG+ +L + IHRD+ A NIL+ + + DFGLA+ + +V
Sbjct: 157 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 480 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+SFGV+L E+ +
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 115/238 (48%), Gaps = 52/238 (21%)
Query: 318 FAKSNL-----LGQGGFG-YVHKGVLPNGKE-----VAVKSLKTGSGQGERE-FSAEVEI 365
F ++NL LG G FG V GKE VAVK LK+ + E+E +E++I
Sbjct: 28 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 87
Query: 366 ISRV-HHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG------------------- 405
+S + H ++V+L+G C GG +++ E+ L L
Sbjct: 88 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGL 147
Query: 406 --------ENRPVMDFATRVRIALGSAKGLAYL-HEDCHPRIIHRDIKAANILIDDNFEA 456
E R ++ F+++V A+G+A+L ++C IHRD+ A N+L+ + A
Sbjct: 148 DKEDGRPLELRDLLHFSSQV------AQGMAFLASKNC----IHRDVAARNVLLTNGHVA 197
Query: 457 MVADFGLAK-LSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
+ DFGLA+ + ND++ V ++APE T +SDV+S+G++L E+ +
Sbjct: 198 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 20/213 (9%)
Query: 323 LLGQGGFGYVHKGVLPNGKEV-----AVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSL 377
LG+GGF + + KEV KSL Q E+ S E+ I + H+H+V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 86
Query: 378 VGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRV---RIALGSAKGLAYLHEDC 434
G+ +V E ++L LH + + + R +I LG YLH +
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN- 140
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYASSG 493
R+IHRD+K N+ ++++ E + DFGLA K+ D + + GT Y+APE S
Sbjct: 141 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKK 196
Query: 494 KLTEKSDVFSFGVMLLELITGRRPVDMTMMEDS 526
+ + DV+S G ++ L+ G+ P + + ++++
Sbjct: 197 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 229
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 9/202 (4%)
Query: 318 FAKSNLLGQGGFGYVHKGVLPNGKEV-AVKSLK-TGSGQGEREFSAEVEIISRVHHRHLV 375
F K + +G+G FG V+KG+ + KEV A+K + + + E+ ++S+ ++
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G + + ++ E++ + L AT +R L KGL YLH +
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREIL---KGLDYLHSE-- 135
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKL 495
R IHRDIKAAN+L+ + + +ADFG+A D + V GT ++APE
Sbjct: 136 -RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAY 193
Query: 496 TEKSDVFSFGVMLLELITGRRP 517
K+D++S G+ +EL G P
Sbjct: 194 DFKADIWSLGITAIELAKGEPP 215
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 109/249 (43%), Gaps = 17/249 (6%)
Query: 324 LGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRVHHRHLVSLVG 379
LG+G FG V+ K + A+K L + E + EVEI S + H +++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
Y + L+ E+ T+ L ++ D A L+Y H R+I
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK---RVI 130
Query: 440 HRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKS 499
HRDIK N+L+ E +ADFG + + + T + GT YL PE EK
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDEKV 187
Query: 500 DVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG---LVDPRLEHNY 556
D++S GV+ E + G+ P + +++ +R + D + +G L+ L+HN
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGARDLISRLLKHNP 245
Query: 557 VPHEMARLV 565
M R V
Sbjct: 246 SQRPMLREV 254
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 16/210 (7%)
Query: 321 SNLLGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGER-EFSAEVEIISRVHHRHLVSLV 378
++G G V P ++VA+K + Q E E++ +S+ HH ++VS
Sbjct: 15 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYY 74
Query: 379 GYCIAGGQRMLVYEFVSN-KTLEYHLH----GENRP-VMDFATRVRIALGSAKGLAYLHE 432
+ + LV + +S L+ H GE++ V+D +T I +GL YLH+
Sbjct: 75 TSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 134
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFG----LAKLSNDNHTHVSTRVMGTFGYLAPE 488
+ IHRD+KA NIL+ ++ +ADFG LA + V +GT ++APE
Sbjct: 135 NGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 191
Query: 489 YASSGKLTE-KSDVFSFGVMLLELITGRRP 517
+ + K+D++SFG+ +EL TG P
Sbjct: 192 VMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 109/249 (43%), Gaps = 17/249 (6%)
Query: 324 LGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRVHHRHLVSLVG 379
LG+G FG V+ K + A+K L + E + EVEI S + H +++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
Y + L+ E+ T+ L ++ D A L+Y H R+I
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK---RVI 133
Query: 440 HRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKS 499
HRDIK N+L+ E +ADFG + + + T + GT YL PE EK
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 500 DVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG---LVDPRLEHNY 556
D++S GV+ E + G+ P + +++ +R + D + +G L+ L+HN
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGARDLISRLLKHNP 248
Query: 557 VPHEMARLV 565
M R V
Sbjct: 249 SQRPMLREV 257
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 109/249 (43%), Gaps = 17/249 (6%)
Query: 324 LGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRVHHRHLVSLVG 379
LG+G FG V+ K + A+K L + E + EVEI S + H +++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
Y + L+ E+ T+ L ++ D A L+Y H R+I
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK---RVI 135
Query: 440 HRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKS 499
HRDIK N+L+ E +ADFG + + + T + GT YL PE EK
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDEKV 192
Query: 500 DVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG---LVDPRLEHNY 556
D++S GV+ E + G+ P + +++ +R + D + +G L+ L+HN
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGARDLISRLLKHNP 250
Query: 557 VPHEMARLV 565
M R V
Sbjct: 251 SQRPMLREV 259
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 27/214 (12%)
Query: 324 LGQGGFGYVHKG------VLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRHLV 375
LG+G FG V + + VAVK LK G+ E R +E++I+ + HH ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGENRPVM-----------DFATR---VRIA 420
+L+G C GG M++ EF L +L + + DF T + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 421 LGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVST-RVM 479
AKG+ +L + IHRD+ A NIL+ + + DFGLA+ + +V
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 480 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+SFGV+L E+ +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 27/214 (12%)
Query: 324 LGQGGFGYVHKG------VLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRHLV 375
LG+G FG V + + VAVK LK G+ E R +E++I+ + HH ++V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGENRPVM-----------DFATR---VRIA 420
+L+G C GG M++ EF L +L + + DF T + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 421 LGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVST-RVM 479
AKG+ +L + IHRD+ A NIL+ + + DFGLA+ + +V
Sbjct: 192 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 480 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+SFGV+L E+ +
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 20/213 (9%)
Query: 323 LLGQGGFGYVHKGVLPNGKEV-----AVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSL 377
LG+GGF + + KEV KSL Q E+ S E+ I + H+H+V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 82
Query: 378 VGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRV---RIALGSAKGLAYLHEDC 434
G+ +V E ++L LH + + + R +I LG YLH +
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN- 136
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYASSG 493
R+IHRD+K N+ ++++ E + DFGLA K+ D + + GT Y+APE S
Sbjct: 137 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKK 192
Query: 494 KLTEKSDVFSFGVMLLELITGRRPVDMTMMEDS 526
+ + DV+S G ++ L+ G+ P + + ++++
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 225
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 27/214 (12%)
Query: 324 LGQGGFGYVHKG------VLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRHLV 375
LG+G FG V + + VAVK LK G+ E R +E++I+ + HH ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGENRPVM-----------DFATR---VRIA 420
+L+G C GG M++ EF L +L + + DF T + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 421 LGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVST-RVM 479
AKG+ +L + IHRD+ A NIL+ + + DFGLA+ + +V
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 480 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++APE T +SDV+SFGV+L E+ +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 16/210 (7%)
Query: 321 SNLLGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGER-EFSAEVEIISRVHHRHLVSLV 378
++G G V P ++VA+K + Q E E++ +S+ HH ++VS
Sbjct: 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYY 79
Query: 379 GYCIAGGQRMLVYEFVSN-KTLEYHLH----GENRP-VMDFATRVRIALGSAKGLAYLHE 432
+ + LV + +S L+ H GE++ V+D +T I +GL YLH+
Sbjct: 80 TSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 139
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFG----LAKLSNDNHTHVSTRVMGTFGYLAPE 488
+ IHRD+KA NIL+ ++ +ADFG LA + V +GT ++APE
Sbjct: 140 NGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 196
Query: 489 YASSGKLTE-KSDVFSFGVMLLELITGRRP 517
+ + K+D++SFG+ +EL TG P
Sbjct: 197 VMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 20/213 (9%)
Query: 323 LLGQGGFGYVHKGVLPNGKEV-----AVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSL 377
LG+GGF + + KEV KSL Q E+ S E+ I + H+H+V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 82
Query: 378 VGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRV---RIALGSAKGLAYLHEDC 434
G+ +V E ++L LH + + + R +I LG YLH +
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN- 136
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYASSG 493
R+IHRD+K N+ ++++ E + DFGLA K+ D + + GT Y+APE S
Sbjct: 137 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKK 192
Query: 494 KLTEKSDVFSFGVMLLELITGRRPVDMTMMEDS 526
+ + DV+S G ++ L+ G+ P + + ++++
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 225
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 109/249 (43%), Gaps = 17/249 (6%)
Query: 324 LGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRVHHRHLVSLVG 379
LG+G FG V+ K + A+K L + E + EVEI S + H +++ L G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
Y + L+ E+ T+ L ++ D A L+Y H R+I
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK---RVI 147
Query: 440 HRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKS 499
HRDIK N+L+ E +ADFG + + + T + GT YL PE EK
Sbjct: 148 HRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDEKV 204
Query: 500 DVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG---LVDPRLEHNY 556
D++S GV+ E + G+ P + +++ +R + D + +G L+ L+HN
Sbjct: 205 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGARDLISRLLKHNP 262
Query: 557 VPHEMARLV 565
M R V
Sbjct: 263 SQRPMLREV 271
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 109/249 (43%), Gaps = 17/249 (6%)
Query: 324 LGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRVHHRHLVSLVG 379
LG+G FG V+ K + A+K L + E + EVEI S + H +++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
Y + L+ E+ T+ L ++ D A L+Y H R+I
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK---RVI 135
Query: 440 HRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKS 499
HRDIK N+L+ E +ADFG + + + T + GT YL PE EK
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPEMIEGRMHDEKV 192
Query: 500 DVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG---LVDPRLEHNY 556
D++S GV+ E + G+ P + +++ +R + D + +G L+ L+HN
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGARDLISRLLKHNP 250
Query: 557 VPHEMARLV 565
M R V
Sbjct: 251 SQRPMLREV 259
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 22/206 (10%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQG-----EREFSAEVEIISRVHHRHLVSLV 378
LG G FG V KG K V ++K + + E AE ++ ++ + ++V ++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 379 GYCIAGGQRMLVYEFVS----NKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
G C A MLV E NK L+ + H +++ +++ +V + G+ YL E
Sbjct: 79 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLEES- 130
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKL--SNDNHTHVSTRVMGTFGYLAPEYASS 492
+HRD+ A N+L+ A ++DFGL+K +++N T + APE +
Sbjct: 131 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINY 188
Query: 493 GKLTEKSDVFSFGVMLLELIT-GRRP 517
K + KSDV+SFGV++ E + G++P
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 108/249 (43%), Gaps = 17/249 (6%)
Query: 324 LGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRVHHRHLVSLVG 379
LG+G FG V+ K + A+K L + E + EVEI S + H +++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
Y + L+ E+ T+ L ++ D A L+Y H R+I
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK---RVI 131
Query: 440 HRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKS 499
HRDIK N+L+ E +ADFG S + T + GT YL PE EK
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGW---SCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKV 188
Query: 500 DVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG---LVDPRLEHNY 556
D++S GV+ E + G+ P + +++ +R + D + +G L+ L+HN
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGARDLISRLLKHNP 246
Query: 557 VPHEMARLV 565
M R V
Sbjct: 247 SQRPMLREV 255
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 42/233 (18%)
Query: 318 FAKSNL-----LGQGGFGYVHKGVLPNGK------EVAVKSLKTGSGQGE-REFSAEVEI 365
F + NL LG+G FG V K + K VAVK LK + E R+ +E +
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 366 ISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPV--------------- 410
+ +V+H H++ L G C G +L+ E+ +L L E+R V
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLR-ESRKVGPGYLGSGGSRNSSS 138
Query: 411 --------MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFG 462
+ + A ++G+ YL E +++HRD+ A NIL+ + + ++DFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 463 LAKLSNDNHTHVSTRVMGTF--GYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
L++ + + V R G ++A E T +SDV+SFGV+L E++T
Sbjct: 196 LSRDVYEEDSXVK-RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 108/239 (45%), Gaps = 17/239 (7%)
Query: 324 LGQGGFGYVHKGVLPNGKEV-AVKSL-KTGSGQG--EREFSAEVEIISRVHHRHLVSLVG 379
LG+G FG V+ K + A+K L KT + E + EVEI S + H +++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
Y + L+ E+ T+ L +R D A L+Y H R+I
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSR--FDEQRTATYITELANALSYCHSK---RVI 134
Query: 440 HRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKS 499
HRDIK N+L+ N E +ADFG + + + T + GT YL PE EK
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDEKV 191
Query: 500 DVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG---LVDPRLEHN 555
D++S GV+ E + G P + +++ +R + D + +G L+ L+HN
Sbjct: 192 DLWSLGVLCYEFLVGMPPFEAHTYQETYRRISR--VEFTFPDFVTEGARDLISRLLKHN 248
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 111/259 (42%), Gaps = 17/259 (6%)
Query: 314 ATGGFAKSNLLGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRV 369
A F LG+G FG V+ K + A+K L + E + EVEI S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 370 HHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
H +++ L GY + L+ E+ T+ L ++ D A L+Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 123
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
H R+IHRDIK N+L+ E +ADFG + + + T + GT YL PE
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPEM 177
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG--- 546
EK D++S GV+ E + G+ P + +++ +R + D + +G
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGARD 235
Query: 547 LVDPRLEHNYVPHEMARLV 565
L+ L+HN M R V
Sbjct: 236 LISRLLKHNPSQRPMLREV 254
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 109/249 (43%), Gaps = 17/249 (6%)
Query: 324 LGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRVHHRHLVSLVG 379
LG+G FG V+ K + A+K L + E + EVEI S + H +++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
Y + L+ E+ T+ L ++ D A L+Y H R+I
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK---RVI 131
Query: 440 HRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKS 499
HRDIK N+L+ E +ADFG + + + T + GT YL PE EK
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPEMIEGRMHDEKV 188
Query: 500 DVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG---LVDPRLEHNY 556
D++S GV+ E + G+ P + +++ +R + D + +G L+ L+HN
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGARDLISRLLKHNP 246
Query: 557 VPHEMARLV 565
M R V
Sbjct: 247 SQRPMLREV 255
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 106/239 (44%), Gaps = 17/239 (7%)
Query: 324 LGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRVHHRHLVSLVG 379
LG+G FG V+ K + A+K L + E + EVEI S + H +++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
Y + L+ E+ T+ L ++ D A L+Y H R+I
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK---RVI 135
Query: 440 HRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKS 499
HRDIK N+L+ E +ADFG + + + T + GT YL PE EK
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEXIEGRXHDEKV 192
Query: 500 DVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG---LVDPRLEHN 555
D++S GV+ E + G+ P + +++ +R + D + +G L+ L+HN
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGARDLISRLLKHN 249
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 16/212 (7%)
Query: 313 AATGGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSA-EVEIISRVH 370
+++ F + LG G + V+KG+ G VA+K +K S +G + E+ ++ +
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 371 HRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGS------A 424
H ++V L + LV+EF+ N +Y ++R V + + + L
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYM---DSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGY 484
+GLA+ HE+ +I+HRD+K N+LI+ + + DFGLA+ S+ V+ T Y
Sbjct: 119 QGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWY 174
Query: 485 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
AP+ + S D++S G +L E+ITG+
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 20/213 (9%)
Query: 323 LLGQGGFGYVHKGVLPNGKEV-----AVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSL 377
LG+GGF + + KEV KSL Q E+ S E+ I + H+H+V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 106
Query: 378 VGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRV---RIALGSAKGLAYLHEDC 434
G+ +V E ++L LH + + + R +I LG YLH +
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN- 160
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYASSG 493
R+IHRD+K N+ ++++ E + DFGLA K+ D + GT Y+APE S
Sbjct: 161 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVLSKK 216
Query: 494 KLTEKSDVFSFGVMLLELITGRRPVDMTMMEDS 526
+ + DV+S G ++ L+ G+ P + + ++++
Sbjct: 217 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 249
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 109/249 (43%), Gaps = 17/249 (6%)
Query: 324 LGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRVHHRHLVSLVG 379
LG+G FG V+ K + A+K L + E + EVEI S + H +++ L G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
Y + L+ E+ T+ L ++ D A L+Y H R+I
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK---RVI 134
Query: 440 HRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKS 499
HRDIK N+L+ E +ADFG + + + T + GT YL PE EK
Sbjct: 135 HRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDEKV 191
Query: 500 DVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG---LVDPRLEHNY 556
D++S GV+ E + G+ P + +++ +R + D + +G L+ L+HN
Sbjct: 192 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGARDLISRLLKHNP 249
Query: 557 VPHEMARLV 565
M R V
Sbjct: 250 SQRPMLREV 258
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 20/213 (9%)
Query: 323 LLGQGGFGYVHKGVLPNGKEV-----AVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSL 377
LG+GGF + + KEV KSL Q E+ S E+ I + H+H+V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 104
Query: 378 VGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRV---RIALGSAKGLAYLHEDC 434
G+ +V E ++L LH + + + R +I LG YLH +
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN- 158
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYASSG 493
R+IHRD+K N+ ++++ E + DFGLA K+ D + GT Y+APE S
Sbjct: 159 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVLSKK 214
Query: 494 KLTEKSDVFSFGVMLLELITGRRPVDMTMMEDS 526
+ + DV+S G ++ L+ G+ P + + ++++
Sbjct: 215 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 247
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 109/251 (43%), Gaps = 21/251 (8%)
Query: 324 LGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRVHHRHLVSLVG 379
LG+G FG V+ K + A+K L + E + EVEI S + H +++ L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
Y + L+ E+ T+ L ++ D A L+Y H R+I
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK---RVI 132
Query: 440 HRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTR--VMGTFGYLAPEYASSGKLTE 497
HRDIK N+L+ E +ADFG + H S R + GT YL PE E
Sbjct: 133 HRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRXXLCGTLDYLPPEMIEGRMHDE 187
Query: 498 KSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG---LVDPRLEH 554
K D++S GV+ E + G+ P + +++ +R + D + +G L+ L+H
Sbjct: 188 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGARDLISRLLKH 245
Query: 555 NYVPHEMARLV 565
N M R V
Sbjct: 246 NPSQRPMLREV 256
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 111/259 (42%), Gaps = 17/259 (6%)
Query: 314 ATGGFAKSNLLGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRV 369
A F LG+G FG V+ K + A+K L + E + EVEI S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 370 HHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
H +++ L GY + L+ E+ T+ L ++ D A L+Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 123
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
H R+IHRDIK N+L+ E +ADFG + + + T + GT YL PE
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTXLCGTLDYLPPEM 177
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG--- 546
EK D++S GV+ E + G+ P + +++ +R + D + +G
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGARD 235
Query: 547 LVDPRLEHNYVPHEMARLV 565
L+ L+HN M R V
Sbjct: 236 LISRLLKHNPSQRPMLREV 254
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 109/251 (43%), Gaps = 21/251 (8%)
Query: 324 LGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRVHHRHLVSLVG 379
LG+G FG V+ K + A+K L + E + EVEI S + H +++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
Y + L+ E+ T+ L ++ D A L+Y H R+I
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK---RVI 133
Query: 440 HRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTR--VMGTFGYLAPEYASSGKLTE 497
HRDIK N+L+ E +ADFG + H S R + GT YL PE E
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWSV-----HAPSSRRAALCGTLDYLPPEMIEGRMHDE 188
Query: 498 KSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG---LVDPRLEH 554
K D++S GV+ E + G+ P + +++ +R + D + +G L+ L+H
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGARDLISRLLKH 246
Query: 555 NYVPHEMARLV 565
N M R V
Sbjct: 247 NPSQRPMLREV 257
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 133/300 (44%), Gaps = 52/300 (17%)
Query: 324 LGQGGFGYVHK----GVLPN--GKEVAVKSLKTGSGQGERE-FSAEVEIISRV-HHRHLV 375
LG G FG V + G++ + VAVK LK + ERE +E++++S + +H ++V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRI---------------- 419
+L+G C GG +++ E+ L L + + T I
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 420 ALGSAKGLAYL-HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTR 477
+ AKG+A+L ++C IHRD+ A NIL+ + DFGLA+ + ND++ V
Sbjct: 174 SYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 229
Query: 478 VMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGA 537
++APE + T +SDV+S+G+ L EL + + P G
Sbjct: 230 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLG---------------SSPYPGM 274
Query: 538 ALEDGIYDGLVD--PRLEHNYVPHEMARLV-ACGAASIRHSARKRPKMSQIVRALEGDSS 594
++ Y + + L + P EM ++ C A KRP QIV+ +E S
Sbjct: 275 PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDA----DPLKRPTFKQIVQLIEKQIS 330
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 111/259 (42%), Gaps = 17/259 (6%)
Query: 314 ATGGFAKSNLLGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRV 369
A F LG+G FG V+ K + A+K L + E + EVEI S +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 370 HHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
H +++ L GY + L+ E+ T+ L ++ D A L+Y
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 122
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
H R+IHRDIK N+L+ E +ADFG + + + T + GT YL PE
Sbjct: 123 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEM 176
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG--- 546
EK D++S GV+ E + G+ P + +++ +R + D + +G
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGARD 234
Query: 547 LVDPRLEHNYVPHEMARLV 565
L+ L+HN M R V
Sbjct: 235 LISRLLKHNPSQRPMLREV 253
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 109/251 (43%), Gaps = 21/251 (8%)
Query: 324 LGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRVHHRHLVSLVG 379
LG+G FG V+ K + A+K L + E + EVEI S + H +++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
Y + L+ E+ T+ L ++ D A L+Y H R+I
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK---RVI 131
Query: 440 HRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTR--VMGTFGYLAPEYASSGKLTE 497
HRDIK N+L+ E +ADFG + H S R + GT YL PE E
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRDTLCGTLDYLPPEMIEGRMHDE 186
Query: 498 KSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG---LVDPRLEH 554
K D++S GV+ E + G+ P + +++ +R + D + +G L+ L+H
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGARDLISRLLKH 244
Query: 555 NYVPHEMARLV 565
N M R V
Sbjct: 245 NPSQRPMLREV 255
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 9/202 (4%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLK-TGSGQGEREFSAEVEIISRVHHRHLV 375
F K +G+G FG V KG+ K VA+K + + + E+ ++S+ ++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G + + ++ E++ + L AT +R L KGL YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHSE-- 123
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKL 495
+ IHRDIKAAN+L+ ++ E +ADFG+A D +T V GT ++APE
Sbjct: 124 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAY 181
Query: 496 TEKSDVFSFGVMLLELITGRRP 517
K+D++S G+ +EL G P
Sbjct: 182 DSKADIWSLGITAIELARGEPP 203
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 9/202 (4%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLK-TGSGQGEREFSAEVEIISRVHHRHLV 375
F K +G+G FG V KG+ K VA+K + + + E+ ++S+ ++
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G + + ++ E++ + L AT +R L KGL YLH +
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHSE-- 143
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKL 495
+ IHRDIKAAN+L+ ++ E +ADFG+A D +T V GT ++APE
Sbjct: 144 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAY 201
Query: 496 TEKSDVFSFGVMLLELITGRRP 517
K+D++S G+ +EL G P
Sbjct: 202 DSKADIWSLGITAIELARGEPP 223
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 133/300 (44%), Gaps = 52/300 (17%)
Query: 324 LGQGGFGYVHK----GVLPN--GKEVAVKSLKTGSGQGERE-FSAEVEIISRV-HHRHLV 375
LG G FG V + G++ + VAVK LK + ERE +E++++S + +H ++V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRI---------------- 419
+L+G C GG +++ E+ L L + + T I
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 420 ALGSAKGLAYL-HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTR 477
+ AKG+A+L ++C IHRD+ A NIL+ + DFGLA+ + ND++ V
Sbjct: 169 SYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 224
Query: 478 VMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGA 537
++APE + T +SDV+S+G+ L EL + + P G
Sbjct: 225 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLG---------------SSPYPGM 269
Query: 538 ALEDGIYDGLVD--PRLEHNYVPHEMARLV-ACGAASIRHSARKRPKMSQIVRALEGDSS 594
++ Y + + L + P EM ++ C A KRP QIV+ +E S
Sbjct: 270 PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDA----DPLKRPTFKQIVQLIEKQIS 325
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 133/300 (44%), Gaps = 52/300 (17%)
Query: 324 LGQGGFGYVHK----GVLPN--GKEVAVKSLKTGSGQGERE-FSAEVEIISRV-HHRHLV 375
LG G FG V + G++ + VAVK LK + ERE +E++++S + +H ++V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRI---------------- 419
+L+G C GG +++ E+ L L + + T I
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 420 ALGSAKGLAYL-HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTR 477
+ AKG+A+L ++C IHRD+ A NIL+ + DFGLA+ + ND++ V
Sbjct: 174 SYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGN 229
Query: 478 VMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGA 537
++APE + T +SDV+S+G+ L EL + + P G
Sbjct: 230 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLG---------------SSPYPGM 274
Query: 538 ALEDGIYDGLVD--PRLEHNYVPHEMARLV-ACGAASIRHSARKRPKMSQIVRALEGDSS 594
++ Y + + L + P EM ++ C A KRP QIV+ +E S
Sbjct: 275 PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDA----DPLKRPTFKQIVQLIEKQIS 330
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 109/249 (43%), Gaps = 17/249 (6%)
Query: 324 LGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRVHHRHLVSLVG 379
LG+G FG V+ K + A+K L + E + EVEI S + H +++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
Y + L+ E+ T+ L ++ D A L+Y H R+I
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK---RVI 130
Query: 440 HRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKS 499
HRDIK N+L+ E +ADFG + + + T + GT YL PE EK
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPEMIEGRMHDEKV 187
Query: 500 DVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG---LVDPRLEHNY 556
D++S GV+ E + G+ P + +++ +R + D + +G L+ L+HN
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGARDLISRLLKHNP 245
Query: 557 VPHEMARLV 565
M R V
Sbjct: 246 SQRPMLREV 254
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 108/205 (52%), Gaps = 17/205 (8%)
Query: 318 FAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRHLV 375
+ K +G+G +G V+K G+ VA+K ++ + +A E+ ++ +HH ++V
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSA-KGLAYLHEDC 434
SL+ + LV+EF+ K L+ L + D ++++I L +G+A+ H+
Sbjct: 83 SLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQD--SQIKIYLYQLLRGVAHCHQH- 138
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMGTFGYLAPE-YA 490
RI+HRD+K N+LI+ + +ADFGLA+ + ++TH T Y AP+
Sbjct: 139 --RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV----TLWYRAPDVLM 192
Query: 491 SSGKLTEKSDVFSFGVMLLELITGR 515
S K + D++S G + E+ITG+
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 133/300 (44%), Gaps = 52/300 (17%)
Query: 324 LGQGGFGYVHK----GVLPN--GKEVAVKSLKTGSGQGERE-FSAEVEIISRV-HHRHLV 375
LG G FG V + G++ + VAVK LK + ERE +E++++S + +H ++V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRI---------------- 419
+L+G C GG +++ E+ L L + + T I
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 420 ALGSAKGLAYL-HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTR 477
+ AKG+A+L ++C IHRD+ A NIL+ + DFGLA+ + ND++ V
Sbjct: 151 SYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 206
Query: 478 VMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGA 537
++APE + T +SDV+S+G+ L EL + + P G
Sbjct: 207 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLG---------------SSPYPGM 251
Query: 538 ALEDGIYDGLVD--PRLEHNYVPHEMARLV-ACGAASIRHSARKRPKMSQIVRALEGDSS 594
++ Y + + L + P EM ++ C A KRP QIV+ +E S
Sbjct: 252 PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDA----DPLKRPTFKQIVQLIEKQIS 307
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 108/205 (52%), Gaps = 17/205 (8%)
Query: 318 FAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRHLV 375
+ K +G+G +G V+K G+ VA+K ++ + +A E+ ++ +HH ++V
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSA-KGLAYLHEDC 434
SL+ + LV+EF+ K L+ L + D ++++I L +G+A+ H+
Sbjct: 83 SLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQD--SQIKIYLYQLLRGVAHCHQH- 138
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMGTFGYLAPE-YA 490
RI+HRD+K N+LI+ + +ADFGLA+ + ++TH T Y AP+
Sbjct: 139 --RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV----TLWYRAPDVLM 192
Query: 491 SSGKLTEKSDVFSFGVMLLELITGR 515
S K + D++S G + E+ITG+
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 20/213 (9%)
Query: 323 LLGQGGFGYVHKGVLPNGKEV-----AVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSL 377
LG+GGF + + KEV KSL Q E+ S E+ I + H+H+V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 80
Query: 378 VGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRV---RIALGSAKGLAYLHEDC 434
G+ +V E ++L LH + + + R +I LG YLH +
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN- 134
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYASSG 493
R+IHRD+K N+ ++++ E + DFGLA K+ D + GT Y+APE S
Sbjct: 135 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVLSKK 190
Query: 494 KLTEKSDVFSFGVMLLELITGRRPVDMTMMEDS 526
+ + DV+S G ++ L+ G+ P + + ++++
Sbjct: 191 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 223
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 133/300 (44%), Gaps = 52/300 (17%)
Query: 324 LGQGGFGYVHK----GVLPN--GKEVAVKSLKTGSGQGERE-FSAEVEIISRV-HHRHLV 375
LG G FG V + G++ + VAVK LK + ERE +E++++S + +H ++V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRI---------------- 419
+L+G C GG +++ E+ L L + + T I
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 420 ALGSAKGLAYL-HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTR 477
+ AKG+A+L ++C IHRD+ A NIL+ + DFGLA+ + ND++ V
Sbjct: 167 SYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 222
Query: 478 VMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGA 537
++APE + T +SDV+S+G+ L EL + + P G
Sbjct: 223 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLG---------------SSPYPGM 267
Query: 538 ALEDGIYDGLVD--PRLEHNYVPHEMARLV-ACGAASIRHSARKRPKMSQIVRALEGDSS 594
++ Y + + L + P EM ++ C A KRP QIV+ +E S
Sbjct: 268 PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDA----DPLKRPTFKQIVQLIEKQIS 323
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 111/259 (42%), Gaps = 17/259 (6%)
Query: 314 ATGGFAKSNLLGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRV 369
A F LG+G FG V+ K + A+K L + E + EVEI S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 370 HHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
H +++ L GY + L+ E+ T+ L ++ D A L+Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 126
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
H R+IHRDIK N+L+ E +ADFG + + + T + GT YL PE
Sbjct: 127 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEM 180
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG--- 546
EK D++S GV+ E + G+ P + +++ +R + D + +G
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGARD 238
Query: 547 LVDPRLEHNYVPHEMARLV 565
L+ L+HN M R V
Sbjct: 239 LISRLLKHNPSQRPMLREV 257
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 108/241 (44%), Gaps = 21/241 (8%)
Query: 324 LGQGGFGYVHKGVLPNGKEV-AVKSL-KTGSGQG--EREFSAEVEIISRVHHRHLVSLVG 379
LG+G FG V+ K + A+K L KT + E + EVEI S + H +++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
Y + L+ E+ T+ L +R D A L+Y H R+I
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSR--FDEQRTATYITELANALSYCHSK---RVI 134
Query: 440 HRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTR--VMGTFGYLAPEYASSGKLTE 497
HRDIK N+L+ N E +ADFG + H S R + GT YL PE E
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWSV-----HAPSSRRDTLCGTLDYLPPEMIEGRMHDE 189
Query: 498 KSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG---LVDPRLEH 554
K D++S GV+ E + G P + +++ +R + D + +G L+ L+H
Sbjct: 190 KVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISR--VEFTFPDFVTEGARDLISRLLKH 247
Query: 555 N 555
N
Sbjct: 248 N 248
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 111/261 (42%), Gaps = 21/261 (8%)
Query: 314 ATGGFAKSNLLGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRV 369
A F LG+G FG V+ K + A+K L + E + EVEI S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 370 HHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
H +++ L GY + L+ E+ T+ L ++ D A L+Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 126
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTR--VMGTFGYLAP 487
H R+IHRDIK N+L+ E +ADFG + H S R + GT YL P
Sbjct: 127 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV-----HAPSSRRDDLCGTLDYLPP 178
Query: 488 EYASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG- 546
E EK D++S GV+ E + G+ P + +++ +R + D + +G
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGA 236
Query: 547 --LVDPRLEHNYVPHEMARLV 565
L+ L+HN M R V
Sbjct: 237 RDLISRLLKHNPSQRPMLREV 257
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCI 382
LG+G +G V+K + G+ VA+K + S +E E+ I+ + H+V G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 383 AGGQRMLVYEFVSNKTLEYHLHGENRPVMD--FATRVRIALGSAKGLAYLHEDCHPRIIH 440
+V E+ ++ + N+ + + AT I + KGL YLH R IH
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIAT---ILQSTLKGLEYLH---FMRKIH 148
Query: 441 RDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSD 500
RDIKA NIL++ A +ADFG+A D V+GT ++APE +D
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK-RNXVIGTPFWMAPEVIQEIGYNCVAD 207
Query: 501 VFSFGVMLLELITGRRP 517
++S G+ +E+ G+ P
Sbjct: 208 IWSLGITAIEMAEGKPP 224
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 324 LGQGGFGYVHK----GVLPNGK--EVAVKSLKT-GSGQGEREFSAEVEIISRVHHRHLVS 376
+G+G FG V + G+LP VAVK LK S + +F E +++ + ++V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVM------DFATRVR------------ 418
L+G C G L++E+++ L L + + D +TR R
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 419 ----IALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTH 473
IA A G+AYL E + +HRD+ N L+ +N +ADFGL++ + + ++
Sbjct: 175 EQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 474 VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
++ PE + T +SDV+++GV+L E+ +
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 108/249 (43%), Gaps = 17/249 (6%)
Query: 324 LGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRVHHRHLVSLVG 379
LG+G FG V+ K + A+K L + E + EVEI S + H +++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
Y + L+ E+ + L ++ D A L+Y H R+I
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYITELANALSYCHSK---RVI 135
Query: 440 HRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKS 499
HRDIK N+L+ E +ADFG + + + T + GT YL PE EK
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDEKV 192
Query: 500 DVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG---LVDPRLEHNY 556
D++S GV+ E + G+ P + +++ +R + D + +G L+ L+HN
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGARDLISRLLKHNP 250
Query: 557 VPHEMARLV 565
M R V
Sbjct: 251 SQRPMLREV 259
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 7/190 (3%)
Query: 324 LGQGGFGYVHKGVL-PNGKEVAVKSLK-TGSGQGEREFSAEVEIISRVHHRHLVSLVGYC 381
+G+G FG V G L + VAVKS + T + +F E I+ + H ++V L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHR 441
+V E V L E + T +++ +A G+ YL C IHR
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKC---CIHR 237
Query: 442 DIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGT-FGYLAPEYASSGKLTEKSD 500
D+ A N L+ + ++DFG+++ D S + + APE + G+ + +SD
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 501 VFSFGVMLLE 510
V+SFG++L E
Sbjct: 298 VWSFGILLWE 307
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 42/233 (18%)
Query: 318 FAKSNL-----LGQGGFGYVHKGVLPNGK------EVAVKSLKTGSGQGE-REFSAEVEI 365
F + NL LG+G FG V K + K VAVK LK + E R+ +E +
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 366 ISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPV--------------- 410
+ +V+H H++ L G C G +L+ E+ +L L E+R V
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLR-ESRKVGPGYLGSGGSRNSSS 138
Query: 411 --------MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFG 462
+ + A ++G+ YL E ++HRD+ A NIL+ + + ++DFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFG 195
Query: 463 LAKLSNDNHTHVSTRVMGTF--GYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
L++ + + V R G ++A E T +SDV+SFGV+L E++T
Sbjct: 196 LSRDVYEEDSXVK-RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 111/261 (42%), Gaps = 21/261 (8%)
Query: 314 ATGGFAKSNLLGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRV 369
A F LG+G FG V+ K + A+K L + E + EVEI S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 370 HHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
H +++ L GY + L+ E+ T+ L ++ D A L+Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 123
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTR--VMGTFGYLAP 487
H R+IHRDIK N+L+ E +ADFG + H S R + GT YL P
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRAALCGTLDYLPP 175
Query: 488 EYASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG- 546
E EK D++S GV+ E + G+ P + +++ +R + D + +G
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGA 233
Query: 547 --LVDPRLEHNYVPHEMARLV 565
L+ L+HN M R V
Sbjct: 234 RDLISRLLKHNPSQRPMLREV 254
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 111/261 (42%), Gaps = 21/261 (8%)
Query: 314 ATGGFAKSNLLGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRV 369
A F LG+G FG V+ K + A+K L + E + EVEI S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 370 HHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
H +++ L GY + L+ E+ T+ L ++ D A L+Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 123
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTR--VMGTFGYLAP 487
H R+IHRDIK N+L+ E +ADFG + H S R + GT YL P
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRXXLCGTLDYLPP 175
Query: 488 EYASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG- 546
E EK D++S GV+ E + G+ P + +++ +R + D + +G
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGA 233
Query: 547 --LVDPRLEHNYVPHEMARLV 565
L+ L+HN M R V
Sbjct: 234 RDLISRLLKHNPSQRPMLREV 254
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 109/249 (43%), Gaps = 17/249 (6%)
Query: 324 LGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRVHHRHLVSLVG 379
LG+G FG V+ K + A+K L + E + EVEI S + H +++ L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
Y + L+ E+ T+ L ++ D A L+Y H R+I
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK---RVI 132
Query: 440 HRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKS 499
HRDIK N+L+ E +A+FG + + + T + GT YL PE EK
Sbjct: 133 HRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDEKV 189
Query: 500 DVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG---LVDPRLEHNY 556
D++S GV+ E + G+ P + +++ +R + D + +G L+ L+HN
Sbjct: 190 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGARDLISRLLKHNP 247
Query: 557 VPHEMARLV 565
M R V
Sbjct: 248 SQRPMLREV 256
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 100/212 (47%), Gaps = 14/212 (6%)
Query: 313 AATGGFAKSNLLGQGGFGYVHKGVLPNGKEV----AVKSLKTGSGQGEREFSAEVE--II 366
A F +LGQG FG V +G + A+K LK + + ++E I+
Sbjct: 21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 80
Query: 367 SRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGS-AK 425
V+H +V L G+ L+ +F+ L L E VM V+ L A
Sbjct: 81 VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE---VMFTEEDVKFYLAELAL 137
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYL 485
L +LH II+RD+K NIL+D+ + DFGL+K S D H + GT Y+
Sbjct: 138 ALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESID-HEKKAYSFCGTVEYM 193
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
APE + T+ +D +SFGV++ E++TG P
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 111/259 (42%), Gaps = 17/259 (6%)
Query: 314 ATGGFAKSNLLGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRV 369
A F LG+G FG V+ K + A+K L + E + EVEI S +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 370 HHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
H +++ L GY + L+ E+ T+ L ++ D A L+Y
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 120
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
H R+IHRDIK N+L+ E +ADFG + + + T + GT YL PE
Sbjct: 121 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEM 174
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG--- 546
EK D++S GV+ E + G+ P + +++ +R + D + +G
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGARD 232
Query: 547 LVDPRLEHNYVPHEMARLV 565
L+ L+HN M R V
Sbjct: 233 LISRLLKHNPSQRPMLREV 251
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 7/190 (3%)
Query: 324 LGQGGFGYVHKGVL-PNGKEVAVKSLK-TGSGQGEREFSAEVEIISRVHHRHLVSLVGYC 381
+G+G FG V G L + VAVKS + T + +F E I+ + H ++V L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHR 441
+V E V L E + T +++ +A G+ YL C IHR
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKC---CIHR 237
Query: 442 DIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGT-FGYLAPEYASSGKLTEKSD 500
D+ A N L+ + ++DFG+++ D S + + APE + G+ + +SD
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 501 VFSFGVMLLE 510
V+SFG++L E
Sbjct: 298 VWSFGILLWE 307
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 111/261 (42%), Gaps = 21/261 (8%)
Query: 314 ATGGFAKSNLLGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRV 369
A F LG+G FG V+ K + A+K L + E + EVEI S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 370 HHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
H +++ L GY + L+ E+ T+ L ++ D A L+Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 126
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTR--VMGTFGYLAP 487
H R+IHRDIK N+L+ E +ADFG + H S R + GT YL P
Sbjct: 127 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRXXLCGTLDYLPP 178
Query: 488 EYASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG- 546
E EK D++S GV+ E + G+ P + +++ +R + D + +G
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGA 236
Query: 547 --LVDPRLEHNYVPHEMARLV 565
L+ L+HN M R V
Sbjct: 237 RDLISRLLKHNPSQRPMLREV 257
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 108/251 (43%), Gaps = 21/251 (8%)
Query: 324 LGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRVHHRHLVSLVG 379
LG+G FG V+ K + A+K L + E + EVEI S + H +++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
Y + L+ E+ + L ++ D A L+Y H R+I
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYITELANALSYCHSK---RVI 135
Query: 440 HRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTR--VMGTFGYLAPEYASSGKLTE 497
HRDIK N+L+ E +ADFG + H S R + GT YL PE E
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRXXLXGTLDYLPPEMIEGRMHDE 190
Query: 498 KSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG---LVDPRLEH 554
K D++S GV+ E + G+ P + +++ +R + D + +G L+ L+H
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGARDLISRLLKH 248
Query: 555 NYVPHEMARLV 565
N M R V
Sbjct: 249 NPSQRPMLREV 259
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 9/202 (4%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLK-TGSGQGEREFSAEVEIISRVHHRHLV 375
F K +G+G FG V KG+ K VA+K + + + E+ ++S+ ++
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G + + ++ E++ + L AT +R L KGL YLH +
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHSE-- 138
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKL 495
+ IHRDIKAAN+L+ ++ E +ADFG+A D + V GT ++APE
Sbjct: 139 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAY 196
Query: 496 TEKSDVFSFGVMLLELITGRRP 517
K+D++S G+ +EL G P
Sbjct: 197 DSKADIWSLGITAIELARGEPP 218
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAV----KSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVG 379
LG G FG V+K KE +V K + T S + ++ E++I++ H ++V L+
Sbjct: 45 LGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
++ EF + ++ + RP+ + +V + + L YLH++ +II
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-VCKQTLDALNYLHDN---KII 157
Query: 440 HRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE-- 497
HRD+KA NIL + + +ADFG++ N +GT ++APE +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSA-KNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 498 ---KSDVFSFGVMLLELITGRRP 517
K+DV+S G+ L+E+ P
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPP 239
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAV----KSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVG 379
LG G FG V+K KE +V K + T S + ++ E++I++ H ++V L+
Sbjct: 45 LGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
++ EF + ++ + RP+ + +V + + L YLH++ +II
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-VCKQTLDALNYLHDN---KII 157
Query: 440 HRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE-- 497
HRD+KA NIL + + +ADFG++ N +GT ++APE +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSA-KNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRP 216
Query: 498 ---KSDVFSFGVMLLELITGRRP 517
K+DV+S G+ L+E+ P
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPP 239
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAV----KSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVG 379
LG G FG V+K KE +V K + T S + ++ E++I++ H ++V L+
Sbjct: 45 LGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
++ EF + ++ + RP+ + +V + + L YLH++ +II
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-VCKQTLDALNYLHDN---KII 157
Query: 440 HRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE-- 497
HRD+KA NIL + + +ADFG++ N +GT ++APE +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSA-KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 498 ---KSDVFSFGVMLLELITGRRP 517
K+DV+S G+ L+E+ P
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPP 239
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 123/291 (42%), Gaps = 53/291 (18%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVS 376
F + L+G GGFG V K +GK +K +K + + ERE A ++++ H ++V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKA----LAKLDHVNIVH 68
Query: 377 LVGYCIAGGQ-----------------RMLVYEFVSNKTLEYHLHGENRPVMDFATRVRI 419
G C G + EF TLE + +D + +
Sbjct: 69 YNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALEL 127
Query: 420 ALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGL-AKLSNDNHTHVSTRV 478
KG+ Y+H ++I+RD+K +NI + D + + DFGL L ND R
Sbjct: 128 FEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK---RXRS 181
Query: 479 MGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAA 538
GT Y++PE SS ++ D+++ G++L EL+ + D+ E ++
Sbjct: 182 KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---------HVCDTAFETSK--FFTD 230
Query: 539 LEDGIYDGLVDPRLEHNYVPHEMARLVACGAASIRHSARKRPKMSQIVRAL 589
L DGI + D + E + +++ RP S+I+R L
Sbjct: 231 LRDGIISDIFDKK-EKTLLQKLLSK-----------KPEDRPNTSEILRTL 269
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 99/207 (47%), Gaps = 14/207 (6%)
Query: 318 FAKSNLLGQGGFGYVHKGVLPNGKEV----AVKSLKTGSGQGEREFSAEVE--IISRVHH 371
F +LGQG FG V +G + A+K LK + + ++E I+ V+H
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 86
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGS-AKGLAYL 430
+V L G+ L+ +F+ L L E VM V+ L A L +L
Sbjct: 87 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE---VMFTEEDVKFYLAELALALDHL 143
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYA 490
H II+RD+K NIL+D+ + DFGL+K S D H + GT Y+APE
Sbjct: 144 HSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESID-HEKKAYSFCGTVEYMAPEVV 199
Query: 491 SSGKLTEKSDVFSFGVMLLELITGRRP 517
+ T+ +D +SFGV++ E++TG P
Sbjct: 200 NRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 31/210 (14%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
+G+G FG V +G G+EVAVK S + ER + E EI V RH +++G+ A
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRH-ENILGFIAA 104
Query: 384 GGQRMLVYE---FVSNKTLEYHLHGE-----NRPVMDFATRVRIALGSAKGLAYLHEDC- 434
+ + VS+ YH HG NR + +++AL +A GLA+LH +
Sbjct: 105 DNKDNGTWTQLWLVSD----YHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 160
Query: 435 ----HPRIIHRDIKAANILIDDNFEAMVADFGLA---KLSNDNHTHVSTRVMGTFGYLAP 487
P I HRD+K+ NIL+ N +AD GLA + D +GT Y+AP
Sbjct: 161 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 220
Query: 488 EYASSG------KLTEKSDVFSFGVMLLEL 511
E + +++D+++ G++ E+
Sbjct: 221 EVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 109/249 (43%), Gaps = 17/249 (6%)
Query: 324 LGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQG---EREFSAEVEIISRVHHRHLVSLVG 379
LG+G FG V+ K + A+K L + E + EVEI S + H +++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
Y + L+ E+ T+ L ++ D A L+Y H R+I
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK---RVI 133
Query: 440 HRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKS 499
HRDIK N+L+ E +A+FG + + + T + GT YL PE EK
Sbjct: 134 HRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 500 DVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIYDG---LVDPRLEHNY 556
D++S GV+ E + G+ P + +++ +R + D + +G L+ L+HN
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGARDLISRLLKHNP 248
Query: 557 VPHEMARLV 565
M R V
Sbjct: 249 SQRPMLREV 257
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 101/207 (48%), Gaps = 14/207 (6%)
Query: 318 FAKSNLLGQGGFG---YVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVE--IISRVHH 371
F +LGQG FG V K P+ G A+K LK + + ++E I++ V+H
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGS-AKGLAYL 430
+V L G+ L+ +F+ L L E VM V+ L A GL +L
Sbjct: 90 PFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE---VMFTEEDVKFYLAELALGLDHL 146
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYA 490
H II+RD+K NIL+D+ + DFGL+K + D H + GT Y+APE
Sbjct: 147 HSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAID-HEKKAYSFCGTVEYMAPEVV 202
Query: 491 SSGKLTEKSDVFSFGVMLLELITGRRP 517
+ + +D +S+GV++ E++TG P
Sbjct: 203 NRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 31/210 (14%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
+G+G FG V +G G+EVAVK S + ER + E EI V RH +++G+ A
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRH-ENILGFIAA 91
Query: 384 GGQRMLVYE---FVSNKTLEYHLHGE-----NRPVMDFATRVRIALGSAKGLAYLHEDC- 434
+ + VS+ YH HG NR + +++AL +A GLA+LH +
Sbjct: 92 DNKDNGTWTQLWLVSD----YHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 147
Query: 435 ----HPRIIHRDIKAANILIDDNFEAMVADFGLA---KLSNDNHTHVSTRVMGTFGYLAP 487
P I HRD+K+ NIL+ N +AD GLA + D +GT Y+AP
Sbjct: 148 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 207
Query: 488 EYASSG------KLTEKSDVFSFGVMLLEL 511
E + +++D+++ G++ E+
Sbjct: 208 EVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 99/207 (47%), Gaps = 14/207 (6%)
Query: 318 FAKSNLLGQGGFGYVHKGVLPNGKEV----AVKSLKTGSGQGEREFSAEVE--IISRVHH 371
F +LGQG FG V +G + A+K LK + + ++E I+ V+H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGS-AKGLAYL 430
+V L G+ L+ +F+ L L E VM V+ L A L +L
Sbjct: 86 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE---VMFTEEDVKFYLAELALALDHL 142
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYA 490
H II+RD+K NIL+D+ + DFGL+K S D H + GT Y+APE
Sbjct: 143 HSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESID-HEKKAYSFCGTVEYMAPEVV 198
Query: 491 SSGKLTEKSDVFSFGVMLLELITGRRP 517
+ T+ +D +SFGV++ E++TG P
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 31/210 (14%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
+G+G FG V +G G+EVAVK S + ER + E EI V RH +++G+ A
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRH-ENILGFIAA 71
Query: 384 GGQRMLVYE---FVSNKTLEYHLHGE-----NRPVMDFATRVRIALGSAKGLAYLHEDC- 434
+ + VS+ YH HG NR + +++AL +A GLA+LH +
Sbjct: 72 DNKDNGTWTQLWLVSD----YHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 127
Query: 435 ----HPRIIHRDIKAANILIDDNFEAMVADFGLA---KLSNDNHTHVSTRVMGTFGYLAP 487
P I HRD+K+ NIL+ N +AD GLA + D +GT Y+AP
Sbjct: 128 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 187
Query: 488 EYASSG------KLTEKSDVFSFGVMLLEL 511
E + +++D+++ G++ E+
Sbjct: 188 EVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 107/228 (46%), Gaps = 21/228 (9%)
Query: 311 LAAATGGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRV 369
L G F L+G G +G V+KG + G+ A+K + +G E E E+ ++ +
Sbjct: 19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDV-TGDEEEEIKQEINMLKKY 77
Query: 370 -HHRHLVSLVGYCIAGG------QRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALG 422
HHR++ + G I Q LV EF ++ + + I
Sbjct: 78 SHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICRE 137
Query: 423 SAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGL-AKLSNDNHTHVSTRVMGT 481
+GL++LH+ ++IHRDIK N+L+ +N E + DFG+ A+L D +GT
Sbjct: 138 ILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRNTFIGT 192
Query: 482 FGYLAPEYASSGKLTE-----KSDVFSFGVMLLELITGRRPV-DMTMM 523
++APE + + + KSD++S G+ +E+ G P+ DM M
Sbjct: 193 PYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM 240
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 31/210 (14%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
+G+G FG V +G G+EVAVK S + ER + E EI V RH +++G+ A
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRH-ENILGFIAA 68
Query: 384 GGQRMLVYE---FVSNKTLEYHLHGE-----NRPVMDFATRVRIALGSAKGLAYLHEDC- 434
+ + VS+ YH HG NR + +++AL +A GLA+LH +
Sbjct: 69 DNKDNGTWTQLWLVSD----YHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 124
Query: 435 ----HPRIIHRDIKAANILIDDNFEAMVADFGLA---KLSNDNHTHVSTRVMGTFGYLAP 487
P I HRD+K+ NIL+ N +AD GLA + D +GT Y+AP
Sbjct: 125 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 184
Query: 488 EYASSG------KLTEKSDVFSFGVMLLEL 511
E + +++D+++ G++ E+
Sbjct: 185 EVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCI 382
LG G FG V+K G A K ++T S + ++ E+EI++ H ++V L+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 383 AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
G+ ++ EF ++ + +R + + +V + + L +LH RIIHRD
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-VCRQMLEALNFLHSK---RIIHRD 134
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE----- 497
+KA N+L+ + +ADFG++ N +GT ++APE + +
Sbjct: 135 LKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDY 193
Query: 498 KSDVFSFGVMLLELITGRRP 517
K+D++S G+ L+E+ P
Sbjct: 194 KADIWSLGITLIEMAQIEPP 213
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 31/210 (14%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
+G+G FG V +G G+EVAVK S + ER + E EI V RH +++G+ A
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRH-ENILGFIAA 66
Query: 384 GGQRMLVYE---FVSNKTLEYHLHGE-----NRPVMDFATRVRIALGSAKGLAYLHEDC- 434
+ + VS+ YH HG NR + +++AL +A GLA+LH +
Sbjct: 67 DNKDNGTWTQLWLVSD----YHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 122
Query: 435 ----HPRIIHRDIKAANILIDDNFEAMVADFGLA---KLSNDNHTHVSTRVMGTFGYLAP 487
P I HRD+K+ NIL+ N +AD GLA + D +GT Y+AP
Sbjct: 123 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 182
Query: 488 EYASSG------KLTEKSDVFSFGVMLLEL 511
E + +++D+++ G++ E+
Sbjct: 183 EVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 114/242 (47%), Gaps = 32/242 (13%)
Query: 313 AATGGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVK-----SLKTGSGQGEREFSAEVEII 366
A G + LG+G FG V G++VA+K L QG E E+ +
Sbjct: 1 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYL 58
Query: 367 SRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKG 426
+ H H++ L + + ++V E+ N+ +Y + + + A R + SA
Sbjct: 59 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQE-ARRFFQQIISAV- 116
Query: 427 LAYLHEDCHP-RIIHRDIKAANILIDDNFEAMVADFGLAKLSND-NHTHVSTRVMGTFGY 484
E CH +I+HRD+K N+L+D++ +ADFGL+ + D N S G+ Y
Sbjct: 117 -----EYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNY 168
Query: 485 LAPEYASSGKLT--EKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDG 542
APE SGKL + DV+S GV+L ++ R P D ++S+ P+L + +G
Sbjct: 169 AAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD----DESI-----PVLFKNISNG 218
Query: 543 IY 544
+Y
Sbjct: 219 VY 220
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 31/210 (14%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
+G+G FG V +G G+EVAVK S + ER + E EI V RH +++G+ A
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRH-ENILGFIAA 65
Query: 384 GGQRMLVYE---FVSNKTLEYHLHGE-----NRPVMDFATRVRIALGSAKGLAYLHEDC- 434
+ + VS+ YH HG NR + +++AL +A GLA+LH +
Sbjct: 66 DNKDNGTWTQLWLVSD----YHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 121
Query: 435 ----HPRIIHRDIKAANILIDDNFEAMVADFGLA---KLSNDNHTHVSTRVMGTFGYLAP 487
P I HRD+K+ NIL+ N +AD GLA + D +GT Y+AP
Sbjct: 122 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 181
Query: 488 EYASSG------KLTEKSDVFSFGVMLLEL 511
E + +++D+++ G++ E+
Sbjct: 182 EVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCI 382
LG G FG V+K G A K ++T S + ++ E+EI++ H ++V L+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 383 AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
G+ ++ EF ++ + +R + + +V + + L +LH RIIHRD
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-VCRQMLEALNFLHSK---RIIHRD 142
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE----- 497
+KA N+L+ + +ADFG++ N +GT ++APE + +
Sbjct: 143 LKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDY 201
Query: 498 KSDVFSFGVMLLELITGRRP 517
K+D++S G+ L+E+ P
Sbjct: 202 KADIWSLGITLIEMAQIEPP 221
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 114/242 (47%), Gaps = 32/242 (13%)
Query: 313 AATGGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVK-----SLKTGSGQGEREFSAEVEII 366
A G + LG+G FG V G++VA+K L QG E E+ +
Sbjct: 10 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYL 67
Query: 367 SRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKG 426
+ H H++ L + + ++V E+ N+ +Y + + + A R + SA
Sbjct: 68 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQE-ARRFFQQIISAV- 125
Query: 427 LAYLHEDCHP-RIIHRDIKAANILIDDNFEAMVADFGLAKLSND-NHTHVSTRVMGTFGY 484
E CH +I+HRD+K N+L+D++ +ADFGL+ + D N S G+ Y
Sbjct: 126 -----EYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNY 177
Query: 485 LAPEYASSGKLT--EKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDG 542
APE SGKL + DV+S GV+L ++ R P D ++S+ P+L + +G
Sbjct: 178 AAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD----DESI-----PVLFKNISNG 227
Query: 543 IY 544
+Y
Sbjct: 228 VY 229
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 9/202 (4%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLK-TGSGQGEREFSAEVEIISRVHHRHLV 375
F K +G+G FG V KG+ K VA+K + + + E+ ++S+ ++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G + + ++ E++ + L AT +R L KGL YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHSE-- 123
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKL 495
+ IHRDIKAAN+L+ ++ E +ADFG+A D + V GT ++APE
Sbjct: 124 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAY 181
Query: 496 TEKSDVFSFGVMLLELITGRRP 517
K+D++S G+ +EL G P
Sbjct: 182 DSKADIWSLGITAIELARGEPP 203
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 114/242 (47%), Gaps = 32/242 (13%)
Query: 313 AATGGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVK-----SLKTGSGQGEREFSAEVEII 366
A G + LG+G FG V G++VA+K L QG E E+ +
Sbjct: 11 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYL 68
Query: 367 SRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKG 426
+ H H++ L + + ++V E+ N+ +Y + + + A R + SA
Sbjct: 69 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQE-ARRFFQQIISAV- 126
Query: 427 LAYLHEDCHP-RIIHRDIKAANILIDDNFEAMVADFGLAKLSND-NHTHVSTRVMGTFGY 484
E CH +I+HRD+K N+L+D++ +ADFGL+ + D N S G+ Y
Sbjct: 127 -----EYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNY 178
Query: 485 LAPEYASSGKLT--EKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDG 542
APE SGKL + DV+S GV+L ++ R P D ++S+ P+L + +G
Sbjct: 179 AAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD----DESI-----PVLFKNISNG 228
Query: 543 IY 544
+Y
Sbjct: 229 VY 230
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 114/242 (47%), Gaps = 32/242 (13%)
Query: 313 AATGGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVK-----SLKTGSGQGEREFSAEVEII 366
A G + LG+G FG V G++VA+K L QG E E+ +
Sbjct: 5 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYL 62
Query: 367 SRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKG 426
+ H H++ L + + ++V E+ N+ +Y + + + A R + SA
Sbjct: 63 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQE-ARRFFQQIISAV- 120
Query: 427 LAYLHEDCHP-RIIHRDIKAANILIDDNFEAMVADFGLAKLSND-NHTHVSTRVMGTFGY 484
E CH +I+HRD+K N+L+D++ +ADFGL+ + D N S G+ Y
Sbjct: 121 -----EYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNY 172
Query: 485 LAPEYASSGKLT--EKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDG 542
APE SGKL + DV+S GV+L ++ R P D ++S+ P+L + +G
Sbjct: 173 AAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD----DESI-----PVLFKNISNG 222
Query: 543 IY 544
+Y
Sbjct: 223 VY 224
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 124/304 (40%), Gaps = 66/304 (21%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVS 376
F + L+G GGFG V K +GK ++ +K + + ERE A ++++ H ++V
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKA----LAKLDHVNIVH 69
Query: 377 LVGYCIAGGQ------------------------------RMLVYEFVSNKTLEYHLHGE 406
G C G + EF TLE +
Sbjct: 70 YNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 407 NRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGL-AK 465
+D + + KG+ Y+H ++IHRD+K +NI + D + + DFGL
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTS 185
Query: 466 LSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMED 525
L ND TR GT Y++PE SS ++ D+++ G++L EL+ + D
Sbjct: 186 LKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---------HVCD 233
Query: 526 SLVEWARPLLGAALEDGIYDGLVDPRLEHNYVPHEMARLVACGAASIRHSARKRPKMSQI 585
+ E ++ L DGI + D + E + +++ RP S+I
Sbjct: 234 TAFETSK--FFTDLRDGIISDIFDKK-EKTLLQKLLSK-----------KPEDRPNTSEI 279
Query: 586 VRAL 589
+R L
Sbjct: 280 LRTL 283
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 148/338 (43%), Gaps = 57/338 (16%)
Query: 322 NLLGQGGFGYVHKGVLPNGKE----VAVKSLKTGSGQG-EREFSAEVEIISRVHHRHLVS 376
++LG G F V +L K VA+K + + +G E E+ ++ ++ H ++V+
Sbjct: 24 DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 377 LVGYCIAGGQRMLVYEFVS-----NKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLH 431
L +GG L+ + VS ++ +E + E R+ + YLH
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER-------DASRLIFQVLDAVKYLH 133
Query: 432 EDCHPRIIHRDIKAANIL---IDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
+ I+HRD+K N+L +D++ + M++DFGL+K+ + V + GT GY+APE
Sbjct: 134 D---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--VLSTACGTPGYVAPE 188
Query: 489 YASSGKLTEKSDVFSFGVMLLELITGRRPV----DMTMMEDSLVEWARPLLGAALEDGIY 544
+ ++ D +S GV+ L+ G P D + E L A + D I
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK--AEYEFDSPYWDDIS 246
Query: 545 DGLVDPRLEHNYVPHEMARLVACGAASIRHSARKRPKMSQIVR--ALEGDSSLD-DLNDG 601
D D ++ H M + KR Q ++ + GD++LD +++
Sbjct: 247 DSAKD------FIRHLMEK-----------DPEKRFTCEQALQHPWIAGDTALDKNIHQS 289
Query: 602 VRPGQSSAFSASNTSTEYSATSYNADMKKFRQLALGSQ 639
V F+ S ++AT A ++ R+L LG Q
Sbjct: 290 VSEQIKKNFAKSKWKQAFNAT---AVVRHMRKLQLGHQ 324
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 94/202 (46%), Gaps = 21/202 (10%)
Query: 324 LGQGGFGYVHK-GVLPNGKEVAVKSLKTGSGQGEREF---SAEVEIISRVHHRHLVSLVG 379
LG G FG VH NG+ A+K LK ++ + E ++S V H ++ + G
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHGENR---PVMDF-ATRVRIALGSAKGLAYLHEDCH 435
Q ++ +++ L L R PV F A V +AL YLH
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLAL------EYLHSK-- 125
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKL 495
II+RD+K NIL+D N + DFG AK D V+ + GT Y+APE S+
Sbjct: 126 -DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCGTPDYIAPEVVSTKPY 180
Query: 496 TEKSDVFSFGVMLLELITGRRP 517
+ D +SFG+++ E++ G P
Sbjct: 181 NKSIDWWSFGILIYEMLAGYTP 202
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 102/210 (48%), Gaps = 24/210 (11%)
Query: 318 FAKSNLLGQGGFG--YVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLV 375
F +LG G F ++ K L GK A+K +K + E+ ++ ++ H ++V
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIV 69
Query: 376 SLVGYCIAGGQRMLVYEFVS-----NKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYL 430
+L + LV + VS ++ LE ++ E D + ++ L + K YL
Sbjct: 70 TLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEK----DASLVIQQVLSAVK---YL 122
Query: 431 HEDCHPRIIHRDIKAANILI---DDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAP 487
HE+ I+HRD+K N+L ++N + M+ DFGL+K+ + + + GT GY+AP
Sbjct: 123 HEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG---IMSTACGTPGYVAP 176
Query: 488 EYASSGKLTEKSDVFSFGVMLLELITGRRP 517
E + ++ D +S GV+ L+ G P
Sbjct: 177 EVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 110/220 (50%), Gaps = 9/220 (4%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGER-EFSAEVEIISRVHHRHLV 375
F + + LG G G V K P+G +A K + R + E++++ + ++V
Sbjct: 18 FERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 77
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G + G+ + E + +L+ L R + +V IA+ +GLAYL E H
Sbjct: 78 GFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAV--LRGLAYLREK-H 134
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKL 495
+I+HRD+K +NIL++ E + DFG++ D+ ++ +GT Y+APE
Sbjct: 135 -QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMAPERLQGTHY 190
Query: 496 TEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLL 535
+ +SD++S G+ L+EL GR P+ ++ + RP++
Sbjct: 191 SVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVV 230
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 327 GGFGYVHKGVLPNGKEVAV----KSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCI 382
G FG V+K KE +V K + T S + ++ E++I++ H ++V L+
Sbjct: 21 GDFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 77
Query: 383 AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
++ EF + ++ + RP+ + +V + + L YLH++ +IIHRD
Sbjct: 78 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-VCKQTLDALNYLHDN---KIIHRD 133
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE----- 497
+KA NIL + + +ADFG++ + +GT ++APE +
Sbjct: 134 LKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDY 193
Query: 498 KSDVFSFGVMLLELITGRRP 517
K+DV+S G+ L+E+ P
Sbjct: 194 KADVWSLGITLIEMAEIEPP 213
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 8/195 (4%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCI 382
+GQG G V+ + + G+EVA++ + + E+ ++ + ++V+ + +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 383 AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
G + +V E+++ +L + MD + + L +LH + ++IHRD
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSN---QVIHRD 141
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
IK+ NIL+ + + DFG + ST V GT ++APE + K D++
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIW 200
Query: 503 SFGVMLLELITGRRP 517
S G+M +E+I G P
Sbjct: 201 SLGIMAIEMIEGEPP 215
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 14/198 (7%)
Query: 324 LGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCI 382
+G+G G V GK+VAVK + Q EV I+ HH ++V + +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 383 AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
G + +V EF+ L + AT + L + L+YLH +IHRD
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAT---VCLSVLRALSYLHNQG---VIHRD 166
Query: 443 IKAANILIDDNFEAMVADFGL-AKLSNDNHTHVSTR--VMGTFGYLAPEYASSGKLTEKS 499
IK+ +IL+ + ++DFG A++S + V R ++GT ++APE S +
Sbjct: 167 IKSDSILLTSDGRIKLSDFGFCAQVSKE----VPKRKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 500 DVFSFGVMLLELITGRRP 517
D++S G+M++E+I G P
Sbjct: 223 DIWSLGIMVIEMIDGEPP 240
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 33/224 (14%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
+G+G +G V +G G+ VAVK S + E+ + E E+ + V RH +++G+ +
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETELYNTVMLRH-ENILGFIAS 99
Query: 384 -------GGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDC-- 434
Q L+ + +L +L +D + +RI L A GLA+LH +
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFG 156
Query: 435 ---HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVST----RVMGTFGYLAP 487
P I HRD+K+ NIL+ N + +AD GLA + + + + RV GT Y+AP
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAP 215
Query: 488 EYASSGKLTE------KSDVFSFGVMLLELITGRRPVDMTMMED 525
E + + D+++FG++L E+ RR V ++ED
Sbjct: 216 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGIVED 257
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 33/224 (14%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
+G+G +G V +G G+ VAVK S + E+ + E E+ + V RH +++G+ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETELYNTVMLRH-ENILGFIAS 70
Query: 384 -------GGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDC-- 434
Q L+ + +L +L +D + +RI L A GLA+LH +
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 435 ---HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVST----RVMGTFGYLAP 487
P I HRD+K+ NIL+ N + +AD GLA + + + + RV GT Y+AP
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAP 186
Query: 488 EYASSGKLTE------KSDVFSFGVMLLELITGRRPVDMTMMED 525
E + + D+++FG++L E+ RR V ++ED
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGIVED 228
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 33/224 (14%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
+G+G +G V +G G+ VAVK S + E+ + E E+ + V RH +++G+ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETELYNTVMLRH-ENILGFIAS 70
Query: 384 -------GGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDC-- 434
Q L+ + +L +L +D + +RI L A GLA+LH +
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTT---LDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 435 ---HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVST----RVMGTFGYLAP 487
P I HRD+K+ NIL+ N + +AD GLA + + + + RV GT Y+AP
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAP 186
Query: 488 EYASSGKLTE------KSDVFSFGVMLLELITGRRPVDMTMMED 525
E + + D+++FG++L E+ RR V ++ED
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGIVED 228
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 9/203 (4%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGER-EFSAEVEIISRVHHRHLV 375
F K + LG G G V K P+G +A K + R + E++++ + ++V
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 129
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G + G+ + E + +L+ L R +V IA+ KGL YL E H
Sbjct: 130 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREK-H 186
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKL 495
+I+HRD+K +NIL++ E + DFG++ D+ ++ +GT Y++PE
Sbjct: 187 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHY 242
Query: 496 TEKSDVFSFGVMLLELITGRRPV 518
+ +SD++S G+ L+E+ GR P+
Sbjct: 243 SVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 119/252 (47%), Gaps = 14/252 (5%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGER-EFSAEVEIISRVHHRHLV 375
F K + LG G G V K P+G +A K + R + E++++ + ++V
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 70
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G + G+ + E + +L+ L R +V IA+ KGL YL E H
Sbjct: 71 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREK-H 127
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKL 495
+I+HRD+K +NIL++ E + DFG++ D ++ +GT Y++PE
Sbjct: 128 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---EMANEFVGTRSYMSPERLQGTHY 183
Query: 496 TEKSDVFSFGVMLLELITGRRP-VDMTMME--DSLVEWARPLLGAALEDGIYDGLVDPRL 552
+ +SD++S G+ L+E+ GR P M + E D +V P L +A+ + V+ L
Sbjct: 184 SVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCL 243
Query: 553 EHNYVPHEMARL 564
N P E A L
Sbjct: 244 IKN--PAERADL 253
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 9/203 (4%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGER-EFSAEVEIISRVHHRHLV 375
F K + LG G G V K P+G +A K + R + E++++ + ++V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G + G+ + E + +L+ L R +V IA+ KGL YL E H
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREK-H 124
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKL 495
+I+HRD+K +NIL++ E + DFG++ D+ ++ +GT Y++PE
Sbjct: 125 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHY 180
Query: 496 TEKSDVFSFGVMLLELITGRRPV 518
+ +SD++S G+ L+E+ GR P+
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 18/216 (8%)
Query: 314 ATGGFAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVH 370
AT + +G G +G V+K P +G VA+KS++ +G+ S EV ++ R+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 371 ---HRHLVSLVGYCIAGG-----QRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALG 422
H ++V L+ C + LV+E V ++ L +L P + T +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 423 SAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTF 482
+GL +LH +C I+HRD+K NIL+ +ADFGLA++ ++ V+ T
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALAPVVVTL 175
Query: 483 GYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPV 518
Y APE D++S G + E+ R+P+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 9/203 (4%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGER-EFSAEVEIISRVHHRHLV 375
F K + LG G G V K P+G +A K + R + E++++ + ++V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G + G+ + E + +L+ L R +V IA+ KGL YL E H
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREK-H 124
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKL 495
+I+HRD+K +NIL++ E + DFG++ D+ ++ +GT Y++PE
Sbjct: 125 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHY 180
Query: 496 TEKSDVFSFGVMLLELITGRRPV 518
+ +SD++S G+ L+E+ GR P+
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 9/203 (4%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGER-EFSAEVEIISRVHHRHLV 375
F K + LG G G V K P+G +A K + R + E++++ + ++V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G + G+ + E + +L+ L R +V IA+ KGL YL E H
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREK-H 124
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKL 495
+I+HRD+K +NIL++ E + DFG++ D+ ++ +GT Y++PE
Sbjct: 125 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHY 180
Query: 496 TEKSDVFSFGVMLLELITGRRPV 518
+ +SD++S G+ L+E+ GR P+
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 18/216 (8%)
Query: 314 ATGGFAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVH 370
AT + +G G +G V+K P +G VA+KS++ +G+ S EV ++ R+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 371 ---HRHLVSLVGYCIAGG-----QRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALG 422
H ++V L+ C + LV+E V ++ L +L P + T +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 423 SAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTF 482
+GL +LH +C I+HRD+K NIL+ +ADFGLA++ ++ V+ T
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALDPVVVTL 175
Query: 483 GYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPV 518
Y APE D++S G + E+ R+P+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 19/208 (9%)
Query: 322 NLLGQGGFGYVHKGVLPN----GKEVAVKSLKT-GSGQGE-REFSAEVEIISRVHHRHLV 375
+LG+G FG V +G L +VAVK++K S Q E EF +E + H +++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 376 SLVGYCIAGGQR-----MLVYEFVSNKTLEYHL---HGENRPV-MDFATRVRIALGSAKG 426
L+G CI + M++ F+ L +L E P + T ++ + A G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGT-FGYL 485
+ YL + +HRD+ A N ++ D+ VADFGL+K + R+ ++
Sbjct: 160 MEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELIT 513
A E + T KSDV++FGV + E+ T
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 102/227 (44%), Gaps = 40/227 (17%)
Query: 325 GQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISR--VHHRHLVSLVGYCI 382
+G FG V K L N + VAVK Q ++ + E E+ S + H +++ +G
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIFPI---QDKQSWQNEYEVYSLPGMKHENILQFIGAEK 88
Query: 383 AGGQ----RMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDC---- 434
G L+ F +L L V+ + IA A+GLAYLHED
Sbjct: 89 RGTSVDVDLWLITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLK 145
Query: 435 ---HPRIIHRDIKAANILIDDNFEAMVADFGLA------KLSNDNHTHVSTRVMGTFGYL 485
P I HRDIK+ N+L+ +N A +ADFGLA K + D H V TR Y+
Sbjct: 146 DGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTR-----RYM 200
Query: 486 APEYASSGKLTEKS-----DVFSFGVMLLELIT----GRRPVDMTMM 523
APE ++ D+++ G++L EL + PVD M+
Sbjct: 201 APEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYML 247
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 144/331 (43%), Gaps = 54/331 (16%)
Query: 322 NLLGQGGFGYVHKGVLPNGKE----VAVKSLKTGSGQG-EREFSAEVEIISRVHHRHLVS 376
++LG G F V +L K VA+K + + +G E E+ ++ ++ H ++V+
Sbjct: 24 DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 377 LVGYCIAGGQRMLVYEFVS-----NKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLH 431
L +GG L+ + VS ++ +E + E R+ + YLH
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER-------DASRLIFQVLDAVKYLH 133
Query: 432 EDCHPRIIHRDIKAANIL---IDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
+ I+HRD+K N+L +D++ + M++DFGL+K+ + V + GT GY+APE
Sbjct: 134 D---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--VLSTACGTPGYVAPE 188
Query: 489 YASSGKLTEKSDVFSFGVMLLELITGRRPV----DMTMMEDSLVEWARPLLGAALEDGIY 544
+ ++ D +S GV+ L+ G P D + E L A + D I
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK--AEYEFDSPYWDDIS 246
Query: 545 DGLVDPRLEHNYVPHEMARLVACGAASIRHSARKRPKMSQIVR--ALEGDSSLD-DLNDG 601
D D ++ H M + KR Q ++ + GD++LD +++
Sbjct: 247 DSAKD------FIRHLMEK-----------DPEKRFTCEQALQHPWIAGDTALDKNIHQS 289
Query: 602 VRPGQSSAFSASNTSTEYSATSYNADMKKFR 632
V F+ S ++AT+ M+K +
Sbjct: 290 VSEQIKKNFAKSKWKQAFNATAVVRHMRKLQ 320
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 10/206 (4%)
Query: 318 FAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQ---GEREFSAEVEIISRVHHRH 373
F +LG+GGFG V + GK A K L + G + E +I+++VH R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG--ENRPVMDFATRVRIALGSAKGLAYLH 431
+VSL LV ++ + YH++ E+ P + GL +LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 432 EDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYAS 491
+ II+RD+K N+L+DD+ ++D GLA T GT G++APE
Sbjct: 307 QR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GTPGFMAPELLL 362
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRP 517
+ D F+ GV L E+I R P
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 10/206 (4%)
Query: 318 FAKSNLLGQGGFGYVHKGVL-PNGKEVAVKSLKTGSGQ---GEREFSAEVEIISRVHHRH 373
F +LG+GGFG V + GK A K L + G + E +I+++VH R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG--ENRPVMDFATRVRIALGSAKGLAYLH 431
+VSL LV ++ + YH++ E+ P + GL +LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 432 EDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYAS 491
+ II+RD+K N+L+DD+ ++D GLA T GT G++APE
Sbjct: 307 QR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GTPGFMAPELLL 362
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRP 517
+ D F+ GV L E+I R P
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 9/203 (4%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGER-EFSAEVEIISRVHHRHLV 375
F K + LG G G V K P+G +A K + R + E++++ + ++V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G + G+ + E + +L+ L R +V IA+ KGL YL E
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLRE--K 123
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKL 495
+I+HRD+K +NIL++ E + DFG++ D+ ++ +GT Y++PE
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHY 180
Query: 496 TEKSDVFSFGVMLLELITGRRPV 518
+ +SD++S G+ L+E+ GR P+
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 9/203 (4%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGER-EFSAEVEIISRVHHRHLV 375
F K + LG G G V K P+G +A K + R + E++++ + ++V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G + G+ + E + +L+ L R +V IA+ KGL YL E
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLRE--K 123
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKL 495
+I+HRD+K +NIL++ E + DFG++ D+ ++ +GT Y++PE
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHY 180
Query: 496 TEKSDVFSFGVMLLELITGRRPV 518
+ +SD++S G+ L+E+ GR P+
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 10/206 (4%)
Query: 318 FAKSNLLGQGGFGYVHKGVL-PNGKEVAVKSLKTGSGQ---GEREFSAEVEIISRVHHRH 373
F +LG+GGFG V + GK A K L + G + E +I+++VH R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG--ENRPVMDFATRVRIALGSAKGLAYLH 431
+VSL LV ++ + YH++ E+ P + GL +LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 432 EDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYAS 491
+ II+RD+K N+L+DD+ ++D GLA T GT G++APE
Sbjct: 307 QR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GTPGFMAPELLL 362
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRP 517
+ D F+ GV L E+I R P
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 10/206 (4%)
Query: 318 FAKSNLLGQGGFGYVHKGVL-PNGKEVAVKSLKTGSGQ---GEREFSAEVEIISRVHHRH 373
F +LG+GGFG V + GK A K L + G + E +I+++VH R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHG--ENRPVMDFATRVRIALGSAKGLAYLH 431
+VSL LV ++ + YH++ E+ P + GL +LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 432 EDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYAS 491
+ II+RD+K N+L+DD+ ++D GLA T GT G++APE
Sbjct: 307 QR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GTPGFMAPELLL 362
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRP 517
+ D F+ GV L E+I R P
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 9/203 (4%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGER-EFSAEVEIISRVHHRHLV 375
F K + LG G G V K P+G +A K + R + E++++ + ++V
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 94
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G + G+ + E + +L+ L R +V IA+ KGL YL E H
Sbjct: 95 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREK-H 151
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKL 495
+I+HRD+K +NIL++ E + DFG++ D+ ++ +GT Y++PE
Sbjct: 152 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHY 207
Query: 496 TEKSDVFSFGVMLLELITGRRPV 518
+ +SD++S G+ L+E+ GR P+
Sbjct: 208 SVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 18/216 (8%)
Query: 314 ATGGFAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVH 370
AT + +G G +G V+K P +G VA+KS++ +G+ S EV ++ R+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 371 ---HRHLVSLVGYCIAGG-----QRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALG 422
H ++V L+ C + LV+E V ++ L +L P + T +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 423 SAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTF 482
+GL +LH +C I+HRD+K NIL+ +ADFGLA++ ++ V+ T
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALFPVVVTL 175
Query: 483 GYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPV 518
Y APE D++S G + E+ R+P+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 9/203 (4%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGER-EFSAEVEIISRVHHRHLV 375
F K + LG G G V K P+G +A K + R + E++++ + ++V
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 86
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G + G+ + E + +L+ L R +V IA+ KGL YL E
Sbjct: 87 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLRE--K 142
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKL 495
+I+HRD+K +NIL++ E + DFG++ D+ ++ +GT Y++PE
Sbjct: 143 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHY 199
Query: 496 TEKSDVFSFGVMLLELITGRRPV 518
+ +SD++S G+ L+E+ GR P+
Sbjct: 200 SVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 11/201 (5%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYC 381
+LG+G +G V+ G L N +A+K + + + E+ + + H+++V +G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSA-KGLAYLHEDCHPRIIH 440
G + E V +L L + P+ D + +GL YLH++ +I+H
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVH 145
Query: 441 RDIKAANILIDDNFEAM-VADFGLAK-LSNDNHTHVSTRVMGTFGYLAPEYASSGK--LT 496
RDIK N+LI+ + ++DFG +K L+ N + GT Y+APE G
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRLAGIN--PCTETFTGTLQYMAPEIIDKGPRGYG 203
Query: 497 EKSDVFSFGVMLLELITGRRP 517
+ +D++S G ++E+ TG+ P
Sbjct: 204 KAADIWSLGCTIIEMATGKPP 224
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 8/195 (4%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCI 382
+GQG G V+ + + G+EVA++ + + E+ ++ + ++V+ + +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 383 AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
G + +V E+++ +L + MD + + L +LH + ++IHR+
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSN---QVIHRN 142
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
IK+ NIL+ + + DFG + ST V GT ++APE + K D++
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIW 201
Query: 503 SFGVMLLELITGRRP 517
S G+M +E+I G P
Sbjct: 202 SLGIMAIEMIEGEPP 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 92/195 (47%), Gaps = 8/195 (4%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCI 382
+GQG G V+ + + G+EVA++ + + E+ ++ + ++V+ + +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 383 AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
G + +V E+++ +L + MD + + L +LH + ++IHRD
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSN---QVIHRD 141
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
IK+ NIL+ + + DFG + S V GT ++APE + K D++
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVDIW 200
Query: 503 SFGVMLLELITGRRP 517
S G+M +E+I G P
Sbjct: 201 SLGIMAIEMIEGEPP 215
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 92/195 (47%), Gaps = 8/195 (4%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCI 382
+GQG G V+ + + G+EVA++ + + E+ ++ + ++V+ + +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 383 AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
G + +V E+++ +L + MD + + L +LH + ++IHRD
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSN---QVIHRD 141
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
IK+ NIL+ + + DFG + S V GT ++APE + K D++
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GTPYWMAPEVVTRKAYGPKVDIW 200
Query: 503 SFGVMLLELITGRRP 517
S G+M +E+I G P
Sbjct: 201 SLGIMAIEMIEGEPP 215
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 11/201 (5%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYC 381
+LG+G +G V+ G L N +A+K + + + E+ + + H+++V +G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSA-KGLAYLHEDCHPRIIH 440
G + E V +L L + P+ D + +GL YLH++ +I+H
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVH 131
Query: 441 RDIKAANILIDDNFEAM-VADFGLAK-LSNDNHTHVSTRVMGTFGYLAPEYASSGK--LT 496
RDIK N+LI+ + ++DFG +K L+ N + GT Y+APE G
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSKRLAGIN--PCTETFTGTLQYMAPEIIDKGPRGYG 189
Query: 497 EKSDVFSFGVMLLELITGRRP 517
+ +D++S G ++E+ TG+ P
Sbjct: 190 KAADIWSLGCTIIEMATGKPP 210
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 41/237 (17%)
Query: 316 GGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISR--VHHRH 373
G + +G FG V K L N VAVK Q ++ + +E EI S + H +
Sbjct: 15 GSLQLLEIKARGRFGCVWKAQLMNDF-VAVKIFPL---QDKQSWQSEREIFSTPGMKHEN 70
Query: 374 LVSLVGYCIAGG----QRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
L+ + G + L+ F +L +L G ++ + +A ++GL+Y
Sbjct: 71 LLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGN---IITWNELCHVAETMSRGLSY 127
Query: 430 LHED---CH-----PRIIHRDIKAANILIDDNFEAMVADFGLA------KLSNDNHTHVS 475
LHED C P I HRD K+ N+L+ + A++ADFGLA K D H V
Sbjct: 128 LHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVG 187
Query: 476 TRVMGTFGYLAPEYASSGKLTEKS-----DVFSFGVMLLELITGRR----PVDMTMM 523
TR Y+APE ++ D+++ G++L EL++ + PVD M+
Sbjct: 188 TR-----RYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYML 239
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 92/195 (47%), Gaps = 8/195 (4%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCI 382
+GQG G V+ + + G+EVA++ + + E+ ++ + ++V+ + +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 383 AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
G + +V E+++ +L + MD + + L +LH + ++IHRD
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSN---QVIHRD 142
Query: 443 IKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 502
IK+ NIL+ + + DFG + S V GT ++APE + K D++
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVDIW 201
Query: 503 SFGVMLLELITGRRP 517
S G+M +E+I G P
Sbjct: 202 SLGIMAIEMIEGEPP 216
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 11/215 (5%)
Query: 308 YDELAAATGGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSL-KTGSGQGEREFSAEVEI 365
YDEL + +G GGF V + G+ VA+K + K G E+E
Sbjct: 5 YDELLKY---YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEA 61
Query: 366 ISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK 425
+ + H+H+ L + +V E+ L ++ ++R + + TRV +
Sbjct: 62 LKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR-LSEEETRV-VFRQIVS 119
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYL 485
+AY+H + HRD+K N+L D+ + + DFGL N + G+ Y
Sbjct: 120 AVAYVHSQGYA---HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYA 176
Query: 486 APEYAS-SGKLTEKSDVFSFGVMLLELITGRRPVD 519
APE L ++DV+S G++L L+ G P D
Sbjct: 177 APELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 28/209 (13%)
Query: 322 NLLGQGGFGYVHKGVLPNGKE----VAVKSLKTGSGQG-EREFSAEVEIISRVHHRHLVS 376
++LG G F V +L K VA+K + + +G E E+ ++ ++ H ++V+
Sbjct: 24 DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 377 LVGYCIAGGQRMLVYEFVS-----NKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLH 431
L +GG L+ + VS ++ +E + E R+ + YLH
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER-------DASRLIFQVLDAVKYLH 133
Query: 432 EDCHPRIIHRDIKAANIL---IDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
+ I+HRD+K N+L +D++ + M++DFGL+K+ + V + GT GY+APE
Sbjct: 134 D---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--VLSTACGTPGYVAPE 188
Query: 489 YASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ ++ D +S GV+ L+ G P
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 28/209 (13%)
Query: 322 NLLGQGGFGYVHKGVLPNGKE----VAVKSLKTGSGQG-EREFSAEVEIISRVHHRHLVS 376
++LG G F V +L K VA+K + + +G E E+ ++ ++ H ++V+
Sbjct: 24 DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 377 LVGYCIAGGQRMLVYEFVS-----NKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLH 431
L +GG L+ + VS ++ +E + E R+ + YLH
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER-------DASRLIFQVLDAVKYLH 133
Query: 432 EDCHPRIIHRDIKAANIL---IDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
+ I+HRD+K N+L +D++ + M++DFGL+K+ + V + GT GY+APE
Sbjct: 134 D---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--VLSTACGTPGYVAPE 188
Query: 489 YASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ ++ D +S GV+ L+ G P
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 318 FAKSNLLGQGGFGYVHKGVLPNGK----EVAVKSLKTG--SGQGEREFSAEVEIISRVHH 371
F +LG+G FG V + L +VAVK LK + EF E + H
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 372 RHLVSLVGYCIAGGQR------MLVYEFVSNKTLEYHLH----GENRPVMDFATRVRIAL 421
H+ LVG + + M++ F+ + L L GEN + T VR +
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 422 GSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLA-KLSNDNHTHVSTRVMG 480
A G+ YL IHRD+ A N ++ ++ VADFGL+ K+ + ++
Sbjct: 145 DIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL 201
Query: 481 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
+LA E + T SDV++FGV + E++T G+ P
Sbjct: 202 PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 31/223 (13%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRH--LVSLVGYC 381
+G+G +G V G G++VAVK T E + E EI V RH ++ +
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAAD 100
Query: 382 IAGG----QRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDC--- 434
I G Q L+ ++ N +L +L +D + +++A S GL +LH +
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYLKSTT---LDAKSMLKLAYSSVSGLCHLHTEIFST 157
Query: 435 --HPRIIHRDIKAANILIDDNFEAMVADFGLAK--LSNDNHTHV--STRVMGTFGYLAPE 488
P I HRD+K+ NIL+ N +AD GLA +S+ N + +TRV GT Y+ PE
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRYMPPE 216
Query: 489 YASSG------KLTEKSDVFSFGVMLLELITGRRPVDMTMMED 525
+ +D++SFG++L E+ RR V ++E+
Sbjct: 217 VLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCVSGGIVEE 257
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 318 FAKSNLLGQGGFG---YVHKGVLPN-GKEVAVKSLKTG----SGQGEREFSAEVEIISRV 369
F +LG+GG+G V K N GK A+K LK + + AE I+ V
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 370 HHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
H +V L+ GG+ L+ E++S L L E + D A + A L +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA--LGH 136
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
LH+ II+RD+K NI+++ + DFGL K S + T V+ GT Y+APE
Sbjct: 137 LHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGTIEYMAPEI 192
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
D +S G ++ +++TG P
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 318 FAKSNLLGQGGFG---YVHKGVLPN-GKEVAVKSLKTG----SGQGEREFSAEVEIISRV 369
F +LG+GG+G V K N GK A+K LK + + AE I+ V
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 370 HHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
H +V L+ GG+ L+ E++S L L E + D A + A L +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA--LGH 136
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
LH+ II+RD+K NI+++ + DFGL K S + T V+ GT Y+APE
Sbjct: 137 LHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGTIEYMAPEI 192
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
D +S G ++ +++TG P
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 315 TGGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSL-KTGSGQGEREFSAEVEI--ISRVH 370
G + LG+G FG V ++VA+K + + + + E EI + +
Sbjct: 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR 67
Query: 371 HRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYL 430
H H++ L ++V E+ + +Y + + R D R + A
Sbjct: 68 HPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVE-KKRMTEDEGRRFFQQIICAI----- 121
Query: 431 HEDCHP-RIIHRDIKAANILIDDNFEAMVADFGLAKLSND-NHTHVSTRVMGTFGYLAPE 488
E CH +I+HRD+K N+L+DDN +ADFGL+ + D N S G+ Y APE
Sbjct: 122 -EYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE 177
Query: 489 YASSGKLT--EKSDVFSFGVMLLELITGRRPVD 519
+GKL + DV+S G++L ++ GR P D
Sbjct: 178 -VINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 147/339 (43%), Gaps = 53/339 (15%)
Query: 318 FAKSNLLGQGGFGYVHKGVLP----NGKEVAVKSLKTGSGQG-EREFSAEVEIISRVHHR 372
F LG G F V VL GK AVK + + +G E E+ ++ ++ H
Sbjct: 24 FEFKETLGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHE 80
Query: 373 HLVSLVGYCIAGGQRMLVYEFVS-----NKTLEYHLHGENRPVMDFATRVRIALGSAKGL 427
++V+L + LV + VS ++ +E + E D +T +R L + +
Sbjct: 81 NIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEK----DASTLIRQVLDA---V 133
Query: 428 AYLHEDCHPRIIHRDIKAANILI---DDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGY 484
YLH I+HRD+K N+L D+ + M++DFGL+K+ + V + GT GY
Sbjct: 134 YYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGY 188
Query: 485 LAPEYASSGKLTEKSDVFSFGVMLLELITGRRPV----DMTMMEDSLVEWARPLLGAALE 540
+APE + ++ D +S GV+ L+ G P D + E L A +
Sbjct: 189 VAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILK--AEYEFDSPYW 246
Query: 541 DGIYDGLVDPRLEHNYVPHEMARLVACGAASIRHSARKRPKMSQIVRALEGDSSLD-DLN 599
D I D D N + + + C A+ RH + GD++L+ +++
Sbjct: 247 DDISDSAKD--FIRNLMEKDPNKRYTCEQAA-RHP------------WIAGDTALNKNIH 291
Query: 600 DGVRPGQSSAFSASNTSTEYSATSYNADMKKFRQLALGS 638
+ V F+ S ++AT A ++ R+L LGS
Sbjct: 292 ESVSAQIRKNFAKSKWRQAFNAT---AVVRHMRKLHLGS 327
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 106/238 (44%), Gaps = 23/238 (9%)
Query: 313 AATGGFAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSL---KTGSGQGEREFSAEVEIISR 368
G + + LG G FG V G G +VAVK L K S + E++ +
Sbjct: 13 VKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKL 72
Query: 369 VHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLA 428
H H++ L +V E+VS L ++ R +D R+ G+
Sbjct: 73 FRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR--LDEKESRRLFQQILSGVD 130
Query: 429 YLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
Y H ++HRD+K N+L+D + A +ADFGL+ + +D + G+ Y APE
Sbjct: 131 YCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS--CGSPNYAAPE 185
Query: 489 YASSGKLT--EKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDGIY 544
SG+L + D++S GV+L L+ G P D +D + P L + DGI+
Sbjct: 186 -VISGRLYAGPEVDIWSSGVILYALLCGTLPFD----DDHV-----PTLFKKICDGIF 233
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 33/221 (14%)
Query: 324 LGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCI 382
+G+G G V V +GK VAVK + Q EV I+ H ++V + +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 383 AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVR--------IALGSAKGLAYLHEDC 434
G + +V EF+ L D T R + L + L+ LH
Sbjct: 219 VGDELWVVMEFLEGGAL-----------TDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG 267
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGL-AKLSNDNHTHVSTRVMGTFGYLAPEYASSG 493
+IHRDIK+ +IL+ + ++DFG A++S + ++GT ++APE S
Sbjct: 268 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRL 322
Query: 494 KLTEKSDVFSFGVMLLELITGRRPV-------DMTMMEDSL 527
+ D++S G+M++E++ G P M M+ D+L
Sbjct: 323 PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL 363
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 123/318 (38%), Gaps = 29/318 (9%)
Query: 310 ELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQGEREFSA---EVEI 365
++ F +LG+G FG V + A+K+LK + + E +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 366 ISRV-HHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSA 424
+S H L + V E+++ L YH+ ++ D + A
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK--FDLSRATFYAAEII 129
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGY 484
GL +LH I++RD+K NIL+D + +ADFG+ K N + GT Y
Sbjct: 130 LGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK-ENMLGDAKTNEFCGTPDY 185
Query: 485 LAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSL--VEWARPLLGAALEDG 542
+APE K D +SFGV+L E++ G+ P E+ + P LE
Sbjct: 186 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKE 245
Query: 543 IYDGLVDPRLEHNYVPHEMARLVACGAASIRHSARKRPKMSQI-VRALEGDSSLDDLNDG 601
D LV +V RL +R R+ P +I LE +++
Sbjct: 246 AKDLLV-----KLFVREPEKRL------GVRGDIRQHPLFREINWEELER----KEIDPP 290
Query: 602 VRPGQSSAFSASNTSTEY 619
RP S F SN E+
Sbjct: 291 FRPKVKSPFDCSNFDKEF 308
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 93/217 (42%), Gaps = 12/217 (5%)
Query: 318 FAKSNLLGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREFSA---EVEIISRVHHRH 373
F +LG+G FG V V G AVK LK + + E I+S +
Sbjct: 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHP 84
Query: 374 LVSLVGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE 432
++ + C R+ V EFV+ L +H+ R D A A L +LH+
Sbjct: 85 FLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR--FDEARARFYAAEIISALMFLHD 142
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASS 492
II+RD+K N+L+D +ADFG+ K N +T GT Y+APE
Sbjct: 143 K---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT-FCGTPDYIAPEILQE 198
Query: 493 GKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVE 529
D ++ GV+L E++ G P + ED L E
Sbjct: 199 MLYGPAVDWWAMGVLLYEMLCGHAPFEAE-NEDDLFE 234
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 93/215 (43%), Gaps = 21/215 (9%)
Query: 313 AATGGFAKSNLLGQGGFGYV----HKGVLPNGKEV--AVKSLKTGSGQGERE----FSAE 362
A F ++G+G FG V HK +EV AVK L+ + ++E S
Sbjct: 35 AKPSDFHFLKVIGKGSFGKVLLARHKA-----EEVFYAVKVLQKKAILKKKEEKHIMSER 89
Query: 363 VEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALG 422
++ V H LV L + V ++++ L YHL E R ++ R A
Sbjct: 90 NVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE-RCFLEPRARFYAA-E 147
Query: 423 SAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTF 482
A L YLH I++RD+K NIL+D ++ DFGL K N H ++ GT
Sbjct: 148 IASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNSTTSTFCGTP 203
Query: 483 GYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
YLAPE D + G +L E++ G P
Sbjct: 204 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 123/318 (38%), Gaps = 29/318 (9%)
Query: 310 ELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQGEREFSA---EVEI 365
++ F +LG+G FG V + A+K+LK + + E +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 366 ISRV-HHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSA 424
+S H L + V E+++ L YH+ ++ D + A
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK--FDLSRATFYAAEII 128
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGY 484
GL +LH I++RD+K NIL+D + +ADFG+ K N + GT Y
Sbjct: 129 LGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK-ENMLGDAKTNXFCGTPDY 184
Query: 485 LAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSL--VEWARPLLGAALEDG 542
+APE K D +SFGV+L E++ G+ P E+ + P LE
Sbjct: 185 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKE 244
Query: 543 IYDGLVDPRLEHNYVPHEMARLVACGAASIRHSARKRPKMSQI-VRALEGDSSLDDLNDG 601
D LV +V RL +R R+ P +I LE +++
Sbjct: 245 AKDLLV-----KLFVREPEKRL------GVRGDIRQHPLFREINWEELER----KEIDPP 289
Query: 602 VRPGQSSAFSASNTSTEY 619
RP S F SN E+
Sbjct: 290 FRPKVKSPFDCSNFDKEF 307
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 33/221 (14%)
Query: 324 LGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCI 382
+G+G G V V +GK VAVK + Q EV I+ H ++V + +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 383 AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVR--------IALGSAKGLAYLHEDC 434
G + +V EF+ L D T R + L + L+ LH
Sbjct: 142 VGDELWVVMEFLEGGALT-----------DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG 190
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGL-AKLSNDNHTHVSTRVMGTFGYLAPEYASSG 493
+IHRDIK+ +IL+ + ++DFG A++S + ++GT ++APE S
Sbjct: 191 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRL 245
Query: 494 KLTEKSDVFSFGVMLLELITGRRPV-------DMTMMEDSL 527
+ D++S G+M++E++ G P M M+ D+L
Sbjct: 246 PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL 286
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 114/283 (40%), Gaps = 87/283 (30%)
Query: 313 AATGGFAKSNL-----LGQGGFGYVHKGVL------PNGKEVAVKSLKTGSGQGE-REFS 360
A+ FA+ L LG+G FG V + P + VAVK LK G+ E +
Sbjct: 19 ASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALM 78
Query: 361 AEVEIISRV-HHRHLVSLVGYCIA-GGQRMLVYE-----------------FVSNKTLEY 401
E++I++ + HH ++V+L+G C GG M++ E F NK
Sbjct: 79 TELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAAL 138
Query: 402 HLHGEN-----------RPVMDFATR---------------------------------- 416
H+ + +P +D T
Sbjct: 139 HMEPKKEKMEPGLEQGKKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITM 198
Query: 417 ---VRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTH 473
+ + A+G+ +L + IHRD+ A NIL+ +N + DFGLA+ N +
Sbjct: 199 EDLISYSFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDY 255
Query: 474 V---STRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 513
V TR+ ++APE + KSDV+S+GV+L E+ +
Sbjct: 256 VRKGDTRL--PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 94/230 (40%), Gaps = 22/230 (9%)
Query: 296 NIALG-FNKSTFTYDELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEV-AVKSLKTGSG 353
N AL K FT D+ F LG+G FG V+ K + A+K L
Sbjct: 1 NTALAEMPKRKFTIDD-------FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL 53
Query: 354 QGE---REFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPV 410
+ E + E+EI S + H +++ + Y + L+ EF L L R
Sbjct: 54 EKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-- 111
Query: 411 MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDN 470
D A L Y HE ++IHRDIK N+L+ E +ADFG + +
Sbjct: 112 FDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSV----H 164
Query: 471 HTHVSTRVM-GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVD 519
+ R M GT YL PE EK D++ GV+ E + G P D
Sbjct: 165 APSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 33/221 (14%)
Query: 324 LGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCI 382
+G+G G V V +GK VAVK + Q EV I+ H ++V + +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 383 AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVR--------IALGSAKGLAYLHEDC 434
G + +V EF+ L D T R + L + L+ LH
Sbjct: 99 VGDELWVVMEFLEGGALT-----------DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG 147
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGL-AKLSNDNHTHVSTRVMGTFGYLAPEYASSG 493
+IHRDIK+ +IL+ + ++DFG A++S + ++GT ++APE S
Sbjct: 148 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPELISRL 202
Query: 494 KLTEKSDVFSFGVMLLELITGRRPV-------DMTMMEDSL 527
+ D++S G+M++E++ G P M M+ D+L
Sbjct: 203 PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL 243
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 33/221 (14%)
Query: 324 LGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCI 382
+G+G G V V +GK VAVK + Q EV I+ H ++V + +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 383 AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVR--------IALGSAKGLAYLHEDC 434
G + +V EF+ L D T R + L + L+ LH
Sbjct: 97 VGDELWVVMEFLEGGALT-----------DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG 145
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGL-AKLSNDNHTHVSTRVMGTFGYLAPEYASSG 493
+IHRDIK+ +IL+ + ++DFG A++S + ++GT ++APE S
Sbjct: 146 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPELISRL 200
Query: 494 KLTEKSDVFSFGVMLLELITGRRPV-------DMTMMEDSL 527
+ D++S G+M++E++ G P M M+ D+L
Sbjct: 201 PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL 241
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 25/188 (13%)
Query: 339 NGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKT 398
+G++VAVK + Q EV I+ H ++V + + G + ++ EF+
Sbjct: 69 SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128
Query: 399 LEYHLHGENRPVMDFATRVR--------IALGSAKGLAYLHEDCHPRIIHRDIKAANILI 450
L D ++VR + + LAYLH +IHRDIK+ +IL+
Sbjct: 129 LT-----------DIVSQVRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILL 174
Query: 451 DDNFEAMVADFGL-AKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLL 509
+ ++DFG A++S D ++GT ++APE S + D++S G+M++
Sbjct: 175 TLDGRVKLSDFGFCAQISKDVPKR--KXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVI 232
Query: 510 ELITGRRP 517
E++ G P
Sbjct: 233 EMVDGEPP 240
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 37/223 (16%)
Query: 324 LGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCI 382
+G+G G V V +GK VAVK + Q EV I+ H ++V + +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 383 AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVR--------IALGSAKGLAYLHEDC 434
G + +V EF+ L D T R + L + L+ LH
Sbjct: 92 VGDELWVVMEFLEGGALT-----------DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG 140
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGL-AKLSNDNHTHVSTR--VMGTFGYLAPEYAS 491
+IHRDIK+ +IL+ + ++DFG A++S + V R ++GT ++APE S
Sbjct: 141 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE----VPRRKXLVGTPYWMAPELIS 193
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRPV-------DMTMMEDSL 527
+ D++S G+M++E++ G P M M+ D+L
Sbjct: 194 RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL 236
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 21/221 (9%)
Query: 312 AAATGGFAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA-----EVEI 365
+ AT + +G G +G V+K P +G VA+KS++ +G G EV +
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 366 ISRVH---HRHLVSLVGYCIAGG-----QRMLVYEFVSNKTLEYHLHGENRPVMDFATRV 417
+ R+ H ++V L+ C + LV+E V ++ L +L P + T
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK 123
Query: 418 RIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTR 477
+ +GL +LH +C I+HRD+K NIL+ +ADFGLA++ ++ T
Sbjct: 124 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALTP 178
Query: 478 VMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPV 518
V+ T Y APE D++S G + E+ R+P+
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 218
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 91/222 (40%), Gaps = 21/222 (9%)
Query: 303 KSTFTYDELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQGE---RE 358
K FT D+ F LG+G FG V+ K + A+K L + E +
Sbjct: 8 KRKFTIDD-------FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 60
Query: 359 FSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVR 418
E+EI S + H +++ + Y + L+ EF L L R D
Sbjct: 61 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSAT 118
Query: 419 IALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRV 478
A L Y HE ++IHRDIK N+L+ E +ADFG + + + R
Sbjct: 119 FMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRX 171
Query: 479 M-GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVD 519
M GT YL PE EK D++ GV+ E + G P D
Sbjct: 172 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 33/221 (14%)
Query: 324 LGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCI 382
+G+G G V V +GK VAVK + Q EV I+ H ++V + +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 383 AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVR--------IALGSAKGLAYLHEDC 434
G + +V EF+ L D T R + L + L+ LH
Sbjct: 88 VGDELWVVMEFLEGGALT-----------DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG 136
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGL-AKLSNDNHTHVSTRVMGTFGYLAPEYASSG 493
+IHRDIK+ +IL+ + ++DFG A++S + ++GT ++APE S
Sbjct: 137 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPELISRL 191
Query: 494 KLTEKSDVFSFGVMLLELITGRRPV-------DMTMMEDSL 527
+ D++S G+M++E++ G P M M+ D+L
Sbjct: 192 PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL 232
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 22/206 (10%)
Query: 324 LGQGGFGYVHKGVLPN--------GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLV 375
LGQG F + KGV EV +K L F ++S++ H+HLV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G C+ G + +LV EFV +L+ +L +N+ ++ ++ +A A + +L E+
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLK-KNKNCINILWKLEVAKQLAAAMHFLEEN-- 132
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGT------FGYLAPEY 489
+IH ++ A NIL+ + + KLS+ +S V+ ++ PE
Sbjct: 133 -TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG---ISITVLPKDILQERIPWVPPEC 188
Query: 490 ASSGK-LTEKSDVFSFGVMLLELITG 514
+ K L +D +SFG L E+ +G
Sbjct: 189 IENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 91/222 (40%), Gaps = 21/222 (9%)
Query: 303 KSTFTYDELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQGE---RE 358
K FT D+ F LG+G FG V+ K + A+K L + E +
Sbjct: 8 KRKFTIDD-------FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 60
Query: 359 FSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVR 418
E+EI S + H +++ + Y + L+ EF L L R D
Sbjct: 61 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSAT 118
Query: 419 IALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRV 478
A L Y HE ++IHRDIK N+L+ E +ADFG + + + R
Sbjct: 119 FMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRX 171
Query: 479 M-GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVD 519
M GT YL PE EK D++ GV+ E + G P D
Sbjct: 172 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 324 LGQGGFGYVHK-GVLPNGKEVAVKSLKTGS-GQGERE-FSAEVEIISRVHHRHLVSLVGY 380
+G G +G K +GK + K L GS + E++ +EV ++ + H ++V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 381 CIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVR------IALGSAKGLAYLHEDC 434
I L +EY G+ V+ T+ R L L ++C
Sbjct: 74 IIDRTNTTLYI------VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 127
Query: 435 HPR------IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
H R ++HRD+K AN+ +D + DFGLA++ N + + T V GT Y++PE
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPE 186
Query: 489 YASSGKLTEKSDVFSFGVMLLEL 511
+ EKSD++S G +L EL
Sbjct: 187 QMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 31/214 (14%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H +
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF LH + + MD + I L K
Sbjct: 68 IVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 118
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMGTF 482
GLA+ H R++HRD+K N+LI+ +ADFGLA+ + +TH T
Sbjct: 119 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TL 171
Query: 483 GYLAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
Y APE K + D++S G + E++T R
Sbjct: 172 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE-VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLVGYC 381
LG+G +G V V +E VAVK + E E+ I ++H ++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGE-NRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIH 440
G + L E+ S L + + P D A R L + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 441 RDIKAANILIDDNFEAMVADFGLAKLSN-DNHTHVSTRVMGTFGYLAPEYASSGKL-TEK 498
RDIK N+L+D+ ++DFGLA + +N + ++ GT Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 499 SDVFSFGVMLLELITGRRPVD 519
DV+S G++L ++ G P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 31/214 (14%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H +
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF LH + + MD + I L K
Sbjct: 65 IVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMGTF 482
GLA+ H R++HRD+K N+LI+ +ADFGLA+ + +TH T
Sbjct: 116 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TL 168
Query: 483 GYLAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
Y APE K + D++S G + E++T R
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 31/214 (14%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H +
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF LH + + MD + I L K
Sbjct: 63 IVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMGTF 482
GLA+ H R++HRD+K N+LI+ +ADFGLA+ + +TH T
Sbjct: 114 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TL 166
Query: 483 GYLAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
Y APE K + D++S G + E++T R
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 31/213 (14%)
Query: 318 FAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRHL 374
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H ++
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 375 VSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK--------G 426
V L+ + LV+EF LH + + MD + I L K G
Sbjct: 72 VKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 122
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMGTFG 483
LA+ H R++HRD+K N+LI+ +ADFGLA+ + +TH T
Sbjct: 123 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLW 175
Query: 484 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
Y APE K + D++S G + E++T R
Sbjct: 176 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 31/214 (14%)
Query: 317 GFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H +
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF LH + + MD + I L K
Sbjct: 64 IVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMGTF 482
GLA+ H R++HRD+K N+LI+ +ADFGLA+ + +TH T
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TL 167
Query: 483 GYLAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
Y APE K + D++S G + E++T R
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 31/214 (14%)
Query: 317 GFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H +
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF LH + + MD + I L K
Sbjct: 63 IVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMGTF 482
GLA+ H R++HRD+K N+LI+ +ADFGLA+ + +TH T
Sbjct: 114 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TL 166
Query: 483 GYLAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
Y APE K + D++S G + E++T R
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE-VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLVGYC 381
LG+G +G V V +E VAVK + E E+ I ++H ++V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGE-NRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIH 440
G + L E+ S L + + P D A R L + G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 128
Query: 441 RDIKAANILIDDNFEAMVADFGLAKLSN-DNHTHVSTRVMGTFGYLAPEYASSGKL-TEK 498
RDIK N+L+D+ ++DFGLA + +N + ++ GT Y+APE + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 188
Query: 499 SDVFSFGVMLLELITGRRPVD 519
DV+S G++L ++ G P D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWD 209
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE-VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLVGYC 381
LG+G +G V V +E VAVK + E E+ I ++H ++V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGE-NRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIH 440
G + L E+ S L + + P D A R L + G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 128
Query: 441 RDIKAANILIDDNFEAMVADFGLAKLSN-DNHTHVSTRVMGTFGYLAPEYASSGKL-TEK 498
RDIK N+L+D+ ++DFGLA + +N + ++ GT Y+APE + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 499 SDVFSFGVMLLELITGRRPVD 519
DV+S G++L ++ G P D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWD 209
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 31/214 (14%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H +
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF LH + + MD + I L K
Sbjct: 64 IVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMGTF 482
GLA+ H R++HRD+K N+LI+ +ADFGLA+ + +TH T
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TL 167
Query: 483 GYLAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
Y APE K + D++S G + E++T R
Sbjct: 168 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 31/213 (14%)
Query: 318 FAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRHL 374
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H ++
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 375 VSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK--------G 426
V L+ + LV+EF LH + + MD + I L K G
Sbjct: 72 VKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 122
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMGTFG 483
LA+ H R++HRD+K N+LI+ +ADFGLA+ + +TH T
Sbjct: 123 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLW 175
Query: 484 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
Y APE K + D++S G + E++T R
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 31/214 (14%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H +
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF LH + + MD + I L K
Sbjct: 64 IVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMGTF 482
GLA+ H R++HRD+K N+LI+ +ADFGLA+ + +TH T
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TL 167
Query: 483 GYLAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
Y APE K + D++S G + E++T R
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE-VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLVGYC 381
LG+G +G V V +E VAVK + E E+ I ++H ++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGE-NRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIH 440
G + L E+ S L + + P D A R L + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 441 RDIKAANILIDDNFEAMVADFGLAKLSN-DNHTHVSTRVMGTFGYLAPEYASSGKL-TEK 498
RDIK N+L+D+ ++DFGLA + +N + ++ GT Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 499 SDVFSFGVMLLELITGRRPVD 519
DV+S G++L ++ G P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 19/222 (8%)
Query: 309 DELAAATGGFAKSNLLGQGGFGYVHKGV-LPNG-KEVAVKSLKTGSGQGEREFSAEVEI- 365
D L A + +G+G +G V K L NG + VA+K ++ +G+ S E+
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 366 ----ISRVHHRHLVSLVGYCIAG-----GQRMLVYEFVSNKTLEYHLHGENRPVMDFATR 416
+ H ++V L C + LV+E V ++ L +L P + T
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETI 122
Query: 417 VRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVST 476
+ +GL +LH R++HRD+K NIL+ + + +ADFGLA++ + T
Sbjct: 123 KDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALT 177
Query: 477 RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPV 518
V+ T Y APE D++S G + E+ R+P+
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE-VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLVGYC 381
LG+G +G V V +E VAVK + E E+ I + ++H ++V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGE-NRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIH 440
G + L E+ S L + + P D A R L + G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 128
Query: 441 RDIKAANILIDDNFEAMVADFGLAKLSN-DNHTHVSTRVMGTFGYLAPEYASSGKL-TEK 498
RDIK N+L+D+ ++DFGLA + +N + ++ GT Y+APE + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 499 SDVFSFGVMLLELITGRRPVD 519
DV+S G++L ++ G P D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWD 209
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 94/198 (47%), Gaps = 11/198 (5%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCI 382
LG G FG VH+ V G+ K + T + E+ I++++HH L++L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 383 AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRD 442
+ +L+ EF+S L + E+ M A + + +GL ++HE I+H D
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINYMRQACEGLKHMHEHS---IVHLD 174
Query: 443 IKAANILIDDNFEAMVA--DFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKS 499
IK NI+ + + V DFGLA KL+ D V+T T + APE + +
Sbjct: 175 IKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPEIVDREPVGFYT 231
Query: 500 DVFSFGVMLLELITGRRP 517
D+++ GV+ L++G P
Sbjct: 232 DMWAIGVLGYVLLSGLSP 249
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE-VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLVGYC 381
LG+G +G V V +E VAVK + E E+ I ++H ++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGE-NRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIH 440
G + L E+ S L + + P D A R L + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 441 RDIKAANILIDDNFEAMVADFGLAKLSN-DNHTHVSTRVMGTFGYLAPEYASSGKL-TEK 498
RDIK N+L+D+ ++DFGLA + +N + ++ GT Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 499 SDVFSFGVMLLELITGRRPVD 519
DV+S G++L ++ G P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 324 LGQGGFGYVHKGVLPNGKEV-AVKSL---KTGSGQGEREFSAEVEIISRVHHRHLVSLVG 379
+G+G FG V + K++ A+K + K R E++I+ + H LV+L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL-W 81
Query: 380 YCIAGGQRM-LVYEFVSNKTLEYHL----HGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
Y + M +V + + L YHL H + V F + +AL YL
Sbjct: 82 YSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALD------YLQ--- 132
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGK 494
+ RIIHRD+K NIL+D++ + DF +A + T ++T + GT Y+APE SS K
Sbjct: 133 NQRIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITT-MAGTKPYMAPEMFSSRK 190
Query: 495 ---LTEKSDVFSFGVMLLELITGRRP 517
+ D +S GV EL+ GRRP
Sbjct: 191 GAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 324 LGQGGFGYV---HKGVLPNGKEVAVKSLKTGSGQGEREFSA-EVEIISRVHHRHLVSLVG 379
+G+G +G V + V N VA+K + Q + + E++I+ R H +++ +
Sbjct: 39 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 96
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHL-------HGENRPVMDFATRVRIALGSAKGLAYLHE 432
A + ++ +E L H N + F ++ +GL Y+H
Sbjct: 97 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIHS 150
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS--TRVMGTFGYLAPEYA 490
++HRD+K +N+L++ + + DFGLA++++ +H H T + T Y APE
Sbjct: 151 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 207
Query: 491 SSGK-LTEKSDVFSFGVMLLELITGR 515
+ K T+ D++S G +L E+++ R
Sbjct: 208 LNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 324 LGQGGFGYV---HKGVLPNGKEVAVKSLKTGSGQGEREFSA-EVEIISRVHHRHLVSLVG 379
+G+G +G V + V N VA+K + Q + + E++I+ R H +++ +
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHL-------HGENRPVMDFATRVRIALGSAKGLAYLHE 432
A + ++ +E L H N + F ++ +GL Y+H
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIHS 142
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS--TRVMGTFGYLAPEYA 490
++HRD+K +N+L++ + + DFGLA++++ +H H T + T Y APE
Sbjct: 143 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 491 SSGK-LTEKSDVFSFGVMLLELITGR 515
+ K T+ D++S G +L E+++ R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE-VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLVGYC 381
LG+G +G V V +E VAVK + E E+ I ++H ++V G+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGE-NRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIH 440
G + L E+ S L + + P D A R L + G+ YLH I H
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 126
Query: 441 RDIKAANILIDDNFEAMVADFGLAKLSN-DNHTHVSTRVMGTFGYLAPEYASSGKL-TEK 498
RDIK N+L+D+ ++DFGLA + +N + ++ GT Y+APE + E
Sbjct: 127 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 186
Query: 499 SDVFSFGVMLLELITGRRPVD 519
DV+S G++L ++ G P D
Sbjct: 187 VDVWSCGIVLTAMLAGELPWD 207
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 9/202 (4%)
Query: 319 AKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSL 377
+K+ +LG G FG VHK G ++A K +KT + + E E+ +++++ H +L+ L
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 378 VGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPR 437
+ +LV E+V L + E+ + + T + +G+ ++H+
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDT-ILFMKQICEGIRHMHQ---MY 207
Query: 438 IIHRDIKAANILI--DDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKL 495
I+H D+K NIL D + + DFGLA+ GT +LAPE + +
Sbjct: 208 ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN--FGTPEFLAPEVVNYDFV 265
Query: 496 TEKSDVFSFGVMLLELITGRRP 517
+ +D++S GV+ L++G P
Sbjct: 266 SFPTDMWSVGVIAYMLLSGLSP 287
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 14/213 (6%)
Query: 313 AATGGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSL---KTGSGQGEREFSAEVEIISR 368
G + + LG G FG V G G +VAVK L K S + E++ +
Sbjct: 8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKL 67
Query: 369 VHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLA 428
H H++ L +V E+VS L ++ R A R+ + SA
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYC 127
Query: 429 YLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
+ H ++HRD+K N+L+D + A +ADFGL+ + +D ++ G+ Y APE
Sbjct: 128 HRH-----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPNYAAPE 180
Query: 489 YASSGKLT--EKSDVFSFGVMLLELITGRRPVD 519
SG+L + D++S GV+L L+ G P D
Sbjct: 181 -VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE-VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLVGYC 381
LG+G +G V V +E VAVK + E E+ I ++H ++V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGE-NRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIH 440
G + L E+ S L + + P D A R L + G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 128
Query: 441 RDIKAANILIDDNFEAMVADFGLAKLSN-DNHTHVSTRVMGTFGYLAPEYASSGKL-TEK 498
RDIK N+L+D+ ++DFGLA + +N + ++ GT Y+APE + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 499 SDVFSFGVMLLELITGRRPVD 519
DV+S G++L ++ G P D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWD 209
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE-VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLVGYC 381
LG+G +G V V +E VAVK + E E+ I ++H ++V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGE-NRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIH 440
G + L E+ S L + + P D A R L + G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 128
Query: 441 RDIKAANILIDDNFEAMVADFGLAKLSN-DNHTHVSTRVMGTFGYLAPEYASSGKL-TEK 498
RDIK N+L+D+ ++DFGLA + +N + ++ GT Y+APE + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 499 SDVFSFGVMLLELITGRRPVD 519
DV+S G++L ++ G P D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE-VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLVGYC 381
LG+G +G V V +E VAVK + E E+ I ++H ++V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGE-NRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIH 440
G + L E+ S L + + P D A R L + G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 128
Query: 441 RDIKAANILIDDNFEAMVADFGLAKLSN-DNHTHVSTRVMGTFGYLAPEYASSGKL-TEK 498
RDIK N+L+D+ ++DFGLA + +N + ++ GT Y+APE + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 499 SDVFSFGVMLLELITGRRPVD 519
DV+S G++L ++ G P D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE-VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLVGYC 381
LG+G +G V V +E VAVK + E E+ I ++H ++V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGE-NRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIH 440
G + L E+ S L + + P D A R L + G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 128
Query: 441 RDIKAANILIDDNFEAMVADFGLAKLSN-DNHTHVSTRVMGTFGYLAPEYASSGKL-TEK 498
RDIK N+L+D+ ++DFGLA + +N + ++ GT Y+APE + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 499 SDVFSFGVMLLELITGRRPVD 519
DV+S G++L ++ G P D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWD 209
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 324 LGQGGFGYV---HKGVLPNGKEVAVKSLKTGSGQGEREFSA-EVEIISRVHHRHLVSLVG 379
+G+G +G V + V N VA+K + Q + + E++I+ R H +++ +
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHL-------HGENRPVMDFATRVRIALGSAKGLAYLHE 432
A + ++ +E L H N + F ++ +GL Y+H
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIHS 142
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS--TRVMGTFGYLAPEYA 490
++HRD+K +N+L++ + + DFGLA++++ +H H T + T Y APE
Sbjct: 143 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 491 SSGK-LTEKSDVFSFGVMLLELITGR 515
+ K T+ D++S G +L E+++ R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 324 LGQGGFGYV---HKGVLPNGKEVAVKSLKTGSGQGEREFSA-EVEIISRVHHRHLVSLVG 379
+G+G +G V + V N VA+K + Q + + E++I+ R H +++ +
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 90
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHL-------HGENRPVMDFATRVRIALGSAKGLAYLHE 432
A + ++ +E L H N + F ++ +GL Y+H
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIHS 144
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS--TRVMGTFGYLAPEYA 490
++HRD+K +N+L++ + + DFGLA++++ +H H T + T Y APE
Sbjct: 145 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 491 SSGK-LTEKSDVFSFGVMLLELITGR 515
+ K T+ D++S G +L E+++ R
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE-VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLVGYC 381
LG+G +G V V +E VAVK + E E+ I ++H ++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGE-NRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIH 440
G + L E+ S L + + P D A R L + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 441 RDIKAANILIDDNFEAMVADFGLAKLSN-DNHTHVSTRVMGTFGYLAPEYASSGKL-TEK 498
RDIK N+L+D+ ++DFGLA + +N + ++ GT Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 499 SDVFSFGVMLLELITGRRPVD 519
DV+S G++L ++ G P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE-VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLVGYC 381
LG+G +G V V +E VAVK + E E+ I ++H ++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGE-NRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIH 440
G + L E+ S L + + P D A R L + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 441 RDIKAANILIDDNFEAMVADFGLAKLSN-DNHTHVSTRVMGTFGYLAPEYASSGKL-TEK 498
RDIK N+L+D+ ++DFGLA + +N + ++ GT Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 499 SDVFSFGVMLLELITGRRPVD 519
DV+S G++L ++ G P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 324 LGQGGFGYV---HKGVLPNGKEVAVKSLKTGSGQGEREFSA-EVEIISRVHHRHLVSLVG 379
+G+G +G V + V N VA+K + Q + + E++I+ R H +++ +
Sbjct: 51 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHL-------HGENRPVMDFATRVRIALGSAKGLAYLHE 432
A + ++ +E L H N + F ++ +GL Y+H
Sbjct: 109 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIHS 162
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS--TRVMGTFGYLAPEYA 490
++HRD+K +N+L++ + + DFGLA++++ +H H T + T Y APE
Sbjct: 163 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 491 SSGK-LTEKSDVFSFGVMLLELITGR 515
+ K T+ D++S G +L E+++ R
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE-VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLVGYC 381
LG+G +G V V +E VAVK + E E+ I ++H ++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGE-NRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIH 440
G + L E+ S L + + P D A R L + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 441 RDIKAANILIDDNFEAMVADFGLAKLSN-DNHTHVSTRVMGTFGYLAPEYASSGKL-TEK 498
RDIK N+L+D+ ++DFGLA + +N + ++ GT Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 499 SDVFSFGVMLLELITGRRPVD 519
DV+S G++L ++ G P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 19/222 (8%)
Query: 309 DELAAATGGFAKSNLLGQGGFGYVHKGV-LPNG-KEVAVKSLKTGSGQGEREFSAEVEI- 365
D L A + +G+G +G V K L NG + VA+K ++ +G+ S E+
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 366 ----ISRVHHRHLVSLVGYCIAG-----GQRMLVYEFVSNKTLEYHLHGENRPVMDFATR 416
+ H ++V L C + LV+E V ++ L +L P + T
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETI 122
Query: 417 VRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVST 476
+ +GL +LH R++HRD+K NIL+ + + +ADFGLA++ + T
Sbjct: 123 KDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALT 177
Query: 477 RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPV 518
V+ T Y APE D++S G + E+ R+P+
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE-VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLVGYC 381
LG+G +G V V +E VAVK + E E+ I ++H ++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGE-NRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIH 440
G + L E+ S L + + P D A R L + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 441 RDIKAANILIDDNFEAMVADFGLAKLSN-DNHTHVSTRVMGTFGYLAPEYASSGKL-TEK 498
RDIK N+L+D+ ++DFGLA + +N + ++ GT Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 499 SDVFSFGVMLLELITGRRPVD 519
DV+S G++L ++ G P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 324 LGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA-EVEIISRVHHRHLVSLVGYC 381
+G+G +G V N VA+K + Q + + E++I+ R H +++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 382 IAGGQRMLVYEFVSNKTLEYHL-------HGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
A + ++ +E L H N + F ++ +GL Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIHS-- 146
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS--TRVMGTFGYLAPEYASS 492
++HRD+K +N+L++ + + DFGLA++++ +H H T + T Y APE +
Sbjct: 147 -ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 493 GK-LTEKSDVFSFGVMLLELITGR 515
K T+ D++S G +L E+++ R
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE-VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLVGYC 381
LG+G +G V V +E VAVK + E E+ I ++H ++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGE-NRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIH 440
G + L E+ S L + + P D A R L + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 441 RDIKAANILIDDNFEAMVADFGLAKLSN-DNHTHVSTRVMGTFGYLAPEYASSGKL-TEK 498
RDIK N+L+D+ ++DFGLA + +N + ++ GT Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 499 SDVFSFGVMLLELITGRRPVD 519
DV+S G++L ++ G P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 19/222 (8%)
Query: 309 DELAAATGGFAKSNLLGQGGFGYVHKGV-LPNG-KEVAVKSLKTGSGQGEREFSAEVEI- 365
D L A + +G+G +G V K L NG + VA+K ++ +G+ S E+
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 366 ----ISRVHHRHLVSLVGYCIAG-----GQRMLVYEFVSNKTLEYHLHGENRPVMDFATR 416
+ H ++V L C + LV+E V ++ L +L P + T
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETI 122
Query: 417 VRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVST 476
+ +GL +LH R++HRD+K NIL+ + + +ADFGLA++ + T
Sbjct: 123 KDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALT 177
Query: 477 RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPV 518
V+ T Y APE D++S G + E+ R+P+
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE-VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLVGYC 381
LG+G +G V V +E VAVK + E E+ I ++H ++V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGE-NRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIH 440
G + L E+ S L + + P D A R L + G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 128
Query: 441 RDIKAANILIDDNFEAMVADFGLAKLSN-DNHTHVSTRVMGTFGYLAPEYASSGKL-TEK 498
RDIK N+L+D+ ++DFGLA + +N + ++ GT Y+APE + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 499 SDVFSFGVMLLELITGRRPVD 519
DV+S G++L ++ G P D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWD 209
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 324 LGQGGFGYV---HKGVLPNGKEVAVKSLKTGSGQGEREFSA-EVEIISRVHHRHLVSLVG 379
+G+G +G V + V N VA+K + Q + + E++I+ R H +++ +
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHL-------HGENRPVMDFATRVRIALGSAKGLAYLHE 432
A + ++ +E L H N + F ++ +GL Y+H
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIHS 142
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS--TRVMGTFGYLAPEYA 490
++HRD+K +N+L++ + + DFGLA++++ +H H T + T Y APE
Sbjct: 143 ---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 491 SSGK-LTEKSDVFSFGVMLLELITGR 515
+ K T+ D++S G +L E+++ R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE-VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLVGYC 381
LG+G +G V V +E VAVK + E E+ I ++H ++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGE-NRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIH 440
G + L E+ S L + + P D A R L + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 441 RDIKAANILIDDNFEAMVADFGLAKLSN-DNHTHVSTRVMGTFGYLAPEYASSGKL-TEK 498
RDIK N+L+D+ ++DFGLA + +N + ++ GT Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 499 SDVFSFGVMLLELITGRRPVD 519
DV+S G++L ++ G P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 99/213 (46%), Gaps = 38/213 (17%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRHLVSL-- 377
+LG+G FG V K +E AVK + S + + + EVE++ ++ H +++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 378 ----------VGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGL 427
VG GG+ L E + K H D A RI G+
Sbjct: 89 ILEDSSSFYIVGELYTGGE--LFDEIIKRKRFSEH---------DAA---RIIKQVFSGI 134
Query: 428 AYLHEDCHPRIIHRDIKAANILIDD---NFEAMVADFGLAKLSNDNHTHVSTRVMGTFGY 484
Y+H+ I+HRD+K NIL++ + + + DFGL+ N T + R+ GT Y
Sbjct: 135 TYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYY 189
Query: 485 LAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+APE G EK DV+S GV+L L++G P
Sbjct: 190 IAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 22/206 (10%)
Query: 324 LGQGGFGYVHKGVLPN--------GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLV 375
LGQG F + KGV EV +K L F ++S++ H+HLV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
G C G + +LV EFV +L+ +L +N+ ++ ++ +A A + +L E+
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLK-KNKNCINILWKLEVAKQLAWAMHFLEEN-- 132
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGT------FGYLAPEY 489
+IH ++ A NIL+ + + KLS+ +S V+ ++ PE
Sbjct: 133 -TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG---ISITVLPKDILQERIPWVPPEC 188
Query: 490 ASSGK-LTEKSDVFSFGVMLLELITG 514
+ K L +D +SFG L E+ +G
Sbjct: 189 IENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE-VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLVGYC 381
LG+G +G V V +E VAVK + E E+ I ++H ++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGE-NRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIH 440
G + L E+ S L + + P D A R L + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 441 RDIKAANILIDDNFEAMVADFGLAKLSN-DNHTHVSTRVMGTFGYLAPEYASSGKL-TEK 498
RDIK N+L+D+ ++DFGLA + +N + ++ GT Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 499 SDVFSFGVMLLELITGRRPVD 519
DV+S G++L ++ G P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 99/213 (46%), Gaps = 38/213 (17%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRHLVSL-- 377
+LG+G FG V K +E AVK + S + + + EVE++ ++ H +++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 378 ----------VGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGL 427
VG GG+ L E + K H D A RI G+
Sbjct: 89 ILEDSSSFYIVGELYTGGE--LFDEIIKRKRFSEH---------DAA---RIIKQVFSGI 134
Query: 428 AYLHEDCHPRIIHRDIKAANILIDD---NFEAMVADFGLAKLSNDNHTHVSTRVMGTFGY 484
Y+H+ I+HRD+K NIL++ + + + DFGL+ N T + R+ GT Y
Sbjct: 135 TYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYY 189
Query: 485 LAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+APE G EK DV+S GV+L L++G P
Sbjct: 190 IAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 324 LGQGGFGYV---HKGVLPNGKEVAVKSLKTGSGQGEREFSA-EVEIISRVHHRHLVSLVG 379
+G+G +G V + V N VA+K + Q + + E++I+ R H +++ +
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHL-------HGENRPVMDFATRVRIALGSAKGLAYLHE 432
A + ++ +E L H N + F ++ +GL Y+H
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIHS 142
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS--TRVMGTFGYLAPEYA 490
++HRD+K +N+L++ + + DFGLA++++ +H H T + T Y APE
Sbjct: 143 ---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 491 SSGK-LTEKSDVFSFGVMLLELITGR 515
+ K T+ D++S G +L E+++ R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 31/214 (14%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H +
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+E H+H + + MD + I L K
Sbjct: 63 IVKLLDVIHTENKLYLVFE---------HVHQDLKTFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMGTF 482
GLA+ H R++HRD+K N+LI+ +ADFGLA+ + +TH T
Sbjct: 114 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TL 166
Query: 483 GYLAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
Y APE K + D++S G + E++T R
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 318 FAKSNLLGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREF---SAEVEIISRVHHRH 373
F +LG+G F V L +E A+K L+ E + + E +++SR+ H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 374 LVSLVGYCIAGGQRMLV-YEFVSNKTLEYHLHGENRPVMDF---ATRVRIALGSAKGLAY 429
V L +C +++ + N L ++ R + F TR A L Y
Sbjct: 99 FVKLY-FCFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTA-EIVSALEY 152
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGYLAPE 488
LH IIHRD+K NIL++++ + DFG AK LS ++ + +GT Y++PE
Sbjct: 153 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 209
Query: 489 YASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ + SD+++ G ++ +L+ G P
Sbjct: 210 LLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVHHRH 373
F+ +G G FG V+ + N + VA+K + Q ++ EV + ++ H +
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 374 LVSLVGYCIAGGQRMLVYEFV---SNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYL 430
+ G + LV E+ ++ LE H +P+ + + G+ +GLAYL
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVH----KKPLQEVEIAA-VTHGALQGLAYL 170
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY- 489
H +IHRD+KA NIL+ + + DFG A + + V GT ++APE
Sbjct: 171 HSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVI 222
Query: 490 --ASSGKLTEKSDVFSFGVMLLELITGRRPV 518
G+ K DV+S G+ +EL + P+
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 324 LGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA-EVEIISRVHHRHLVSLVGYC 381
+G+G +G V N VA+K + Q + + E++I+ R H +++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 382 IAGGQRMLVYEFVSNKTLEYHL-------HGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
A + ++ +E L H N + F ++ +GL Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQI------LRGLKYIHS-- 146
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS--TRVMGTFGYLAPEYASS 492
++HRD+K +N+L++ + + DFGLA++++ +H H T + T Y APE +
Sbjct: 147 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 493 GK-LTEKSDVFSFGVMLLELITGR 515
K T+ D++S G +L E+++ R
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 38/213 (17%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRHLVSL-- 377
+LG+G FG V K +E AVK + S + + + EVE++ ++ H +++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 378 ----------VGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGL 427
VG GG+ L E + K H RI G+
Sbjct: 89 ILEDSSSFYIVGELYTGGE--LFDEIIKRKRFSEH------------DAARIIKQVFSGI 134
Query: 428 AYLHEDCHPRIIHRDIKAANILIDD---NFEAMVADFGLAKLSNDNHTHVSTRVMGTFGY 484
Y+H+ I+HRD+K NIL++ + + + DFGL+ N T + R+ GT Y
Sbjct: 135 TYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYY 189
Query: 485 LAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+APE G EK DV+S GV+L L++G P
Sbjct: 190 IAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 14/213 (6%)
Query: 313 AATGGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSL---KTGSGQGEREFSAEVEIISR 368
G + + LG G FG V G G +VAVK L K S + E++ +
Sbjct: 8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKL 67
Query: 369 VHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLA 428
H H++ L +V E+VS L ++ R A R+ + SA
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYC 127
Query: 429 YLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
+ H ++HRD+K N+L+D + A +ADFGL+ + +D + G+ Y APE
Sbjct: 128 HRH-----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS--CGSPNYAAPE 180
Query: 489 YASSGKLT--EKSDVFSFGVMLLELITGRRPVD 519
SG+L + D++S GV+L L+ G P D
Sbjct: 181 -VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 324 LGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA-EVEIISRVHHRHLVSLVGYC 381
+G+G +G V N VA+K + Q + + E++I+ R H +++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 382 IAGGQRMLVYEFVSNKTLEYHL-------HGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
A + ++ +E L H N + F ++ +GL Y+H
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIHS-- 147
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS--TRVMGTFGYLAPEYASS 492
++HRD+K +N+L++ + + DFGLA++++ +H H T + T Y APE +
Sbjct: 148 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 206
Query: 493 GK-LTEKSDVFSFGVMLLELITGR 515
K T+ D++S G +L E+++ R
Sbjct: 207 SKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 324 LGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA-EVEIISRVHHRHLVSLVGYC 381
+G+G +G V N VA+K + Q + + E++I+ R H +++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 382 IAGGQRMLVYEFVSNKTLEYHL-------HGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
A + ++ +E L H N + F ++ +GL Y+H
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIHS-- 148
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS--TRVMGTFGYLAPEYASS 492
++HRD+K +N+L++ + + DFGLA++++ +H H T + T Y APE +
Sbjct: 149 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 207
Query: 493 GK-LTEKSDVFSFGVMLLELITGR 515
K T+ D++S G +L E+++ R
Sbjct: 208 SKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 324 LGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA-EVEIISRVHHRHLVSLVGYC 381
+G+G +G V N VA+K + Q + + E++I+ R H +++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 382 IAGGQRMLVYEFVSNKTLEYHL-------HGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
A + ++ +E L H N + F ++ +GL Y+H
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIHS-- 139
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS--TRVMGTFGYLAPEYASS 492
++HRD+K +N+L++ + + DFGLA++++ +H H T + T Y APE +
Sbjct: 140 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 198
Query: 493 GK-LTEKSDVFSFGVMLLELITGR 515
K T+ D++S G +L E+++ R
Sbjct: 199 SKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 324 LGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA-EVEIISRVHHRHLVSLVGYC 381
+G+G +G V N VA+K + Q + + E++I+ R H +++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 382 IAGGQRMLVYEFVSNKTLEYHL-------HGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
A + ++ +E L H N + F ++ +GL Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIHS-- 146
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS--TRVMGTFGYLAPEYASS 492
++HRD+K +N+L++ + + DFGLA++++ +H H T + T Y APE +
Sbjct: 147 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 493 GK-LTEKSDVFSFGVMLLELITGR 515
K T+ D++S G +L E+++ R
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 324 LGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA-EVEIISRVHHRHLVSLVGYC 381
+G+G +G V N VA+K + Q + + E++I+ R H +++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 382 IAGGQRMLVYEFVSNKTLEYHL-------HGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
A + ++ +E L H N + F ++ +GL Y+H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIHS-- 140
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS--TRVMGTFGYLAPEYASS 492
++HRD+K +N+L++ + + DFGLA++++ +H H T + T Y APE +
Sbjct: 141 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 493 GK-LTEKSDVFSFGVMLLELITGR 515
K T+ D++S G +L E+++ R
Sbjct: 200 SKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE-VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLVGYC 381
LG+G +G V V +E VAVK + E E+ I ++H ++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGE-NRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIH 440
G + L E+ S L + + P D A R L + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 441 RDIKAANILIDDNFEAMVADFGLAKLSN-DNHTHVSTRVMGTFGYLAPEYASSGKL-TEK 498
RDIK N+L+D+ ++DFGLA + +N + ++ GT Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 499 SDVFSFGVMLLELITGRRPVD 519
DV+S G++L ++ G P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 324 LGQGGFGYVHK-GVLPNGKEVAVKSLKTGS-GQGERE-FSAEVEIISRVHHRHLVSLVGY 380
+G G +G K +GK + K L GS + E++ +EV ++ + H ++V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 381 CIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVR------IALGSAKGLAYLHEDC 434
I L +EY G+ V+ T+ R L L ++C
Sbjct: 74 IIDRTNTTLYI------VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 127
Query: 435 HPR------IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
H R ++HRD+K AN+ +D + DFGLA++ N + T + +GT Y++PE
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-TSFAKAFVGTPYYMSPE 186
Query: 489 YASSGKLTEKSDVFSFGVMLLEL 511
+ EKSD++S G +L EL
Sbjct: 187 QMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 324 LGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA-EVEIISRVHHRHLVSLVGYC 381
+G+G +G V N VA+K + Q + + E++I+ R H +++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 382 IAGGQRMLVYEFVSNKTLEYHL-------HGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
A + ++ +E L H N + F ++ +GL Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIHS-- 146
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS--TRVMGTFGYLAPEYASS 492
++HRD+K +N+L++ + + DFGLA++++ +H H T + T Y APE +
Sbjct: 147 -ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 493 GK-LTEKSDVFSFGVMLLELITGR 515
K T+ D++S G +L E+++ R
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 324 LGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA-EVEIISRVHHRHLVSLVGYC 381
+G+G +G V N VA+K + Q + + E++I+ R H +++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 382 IAGGQRMLVYEFVSNKTLEYHL-------HGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
A + ++ +E L H N + F ++ +GL Y+H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIHS-- 140
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS--TRVMGTFGYLAPEYASS 492
++HRD+K +N+L++ + + DFGLA++++ +H H T + T Y APE +
Sbjct: 141 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 493 GK-LTEKSDVFSFGVMLLELITGR 515
K T+ D++S G +L E+++ R
Sbjct: 200 SKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 31/214 (14%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H +
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF LH + + MD + I L K
Sbjct: 64 IVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMGTF 482
GL++ H R++HRD+K N+LI+ +ADFGLA+ + +TH T
Sbjct: 115 GLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TL 167
Query: 483 GYLAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
Y APE K + D++S G + E++T R
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVHHRH 373
F+ +G G FG V+ + N + VA+K + Q ++ EV + ++ H +
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 374 LVSLVGYCIAGGQRMLVYEFV---SNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYL 430
+ G + LV E+ ++ LE H +P+ + + G+ +GLAYL
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVH----KKPLQEVEIAA-VTHGALQGLAYL 131
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY- 489
H +IHRD+KA NIL+ + + DFG A + + V GT ++APE
Sbjct: 132 HSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVI 183
Query: 490 --ASSGKLTEKSDVFSFGVMLLELITGRRPV 518
G+ K DV+S G+ +EL + P+
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 324 LGQGGFGYV---HKGVLPNGKEVAVKSLKTGSGQGEREFSA-EVEIISRVHHRHLVSLVG 379
+G+G +G V + V N VA+K + Q + + E++I+ R H +++ +
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHL-------HGENRPVMDFATRVRIALGSAKGLAYLHE 432
A + ++ +E L H N + F ++ +GL Y+H
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIHS 142
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS--TRVMGTFGYLAPEYA 490
++HRD+K +N+L++ + + DFGLA++++ +H H T + T Y APE
Sbjct: 143 ---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 491 SSGK-LTEKSDVFSFGVMLLELITGR 515
+ K T+ D++S G +L E+++ R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 106/224 (47%), Gaps = 25/224 (11%)
Query: 318 FAKSNLLGQGGFGYVHKGVL----PNGKEVAVKSLKTG--SGQGEREFSAEVEIISRVHH 371
+ + +G+G FG K +L +G++ +K + S + E EV +++ + H
Sbjct: 26 YVRLQKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKH 82
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGEN------RPVMDFATRVRIALGSAK 425
++V G +V ++ L ++ + ++D+ ++ +AL
Sbjct: 83 PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLAL---- 138
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYL 485
++H+ +I+HRDIK+ NI + + + DFG+A++ N ++ +GT YL
Sbjct: 139 --KHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-VELARACIGTPYYL 192
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVE 529
+PE + KSD+++ G +L EL T + + M++ +++
Sbjct: 193 SPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLK 236
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H +
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF LH + + MD + I L K
Sbjct: 66 IVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGY 484
GLA+ H R++HRD+K N+LI+ +ADFGLA+ T+ V T Y
Sbjct: 117 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 171
Query: 485 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
APE K + D++S G + E++T R
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 28/218 (12%)
Query: 324 LGQGGFGYVHKGVL------PNGKEVAVKSLK-TGSGQGEREFSAEVEIISRVHHRHLVS 376
LG+ FG V+KG L + VA+K+LK G EF E + +R+ H ++V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHL-----------HGENRPV---MDFATRVRIALG 422
L+G +++ + S+ L L ++R V ++ V +
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 423 SAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK--LSNDNHTHVSTRVMG 480
A G+ YL ++H+D+ N+L+ D ++D GL + + D + + ++
Sbjct: 137 IAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL- 192
Query: 481 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
++APE GK + SD++S+GV+L E+ + G +P
Sbjct: 193 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 230
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 28/218 (12%)
Query: 324 LGQGGFGYVHKGVL------PNGKEVAVKSLK-TGSGQGEREFSAEVEIISRVHHRHLVS 376
LG+ FG V+KG L + VA+K+LK G EF E + +R+ H ++V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHL-----------HGENRPV---MDFATRVRIALG 422
L+G +++ + S+ L L ++R V ++ V +
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 423 SAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK--LSNDNHTHVSTRVMG 480
A G+ YL ++H+D+ N+L+ D ++D GL + + D + + ++
Sbjct: 154 IAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL- 209
Query: 481 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
++APE GK + SD++S+GV+L E+ + G +P
Sbjct: 210 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 247
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H +
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF LH + + MD + I L K
Sbjct: 64 IVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGY 484
GLA+ H R++HRD+K N+LI+ +ADFGLA+ T+ V T Y
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 485 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
APE K + D++S G + E++T R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H +
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF LH + + MD + I L K
Sbjct: 66 IVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGY 484
GLA+ H R++HRD+K N+LI+ +ADFGLA+ T+ V T Y
Sbjct: 117 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 171
Query: 485 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
APE K + D++S G + E++T R
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 27/211 (12%)
Query: 318 FAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRHL 374
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H ++
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 375 VSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK--------G 426
V L+ + LV+EF LH + + MD + I L K G
Sbjct: 68 VKLLDVIHTENKLYLVFEF---------LHQDLKTFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGYL 485
LA+ H R++HRD+K N+LI+ +ADFGLA+ T+ V T Y
Sbjct: 119 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 173
Query: 486 APEYASSGKLTEKS-DVFSFGVMLLELITGR 515
APE K + D++S G + E++T R
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 317 GFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H +
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF LH + + MD + I L K
Sbjct: 64 IVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGY 484
GLA+ H R++HRD+K N+LI+ +ADFGLA+ T+ V T Y
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 485 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
APE K + D++S G + E++T R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 27/211 (12%)
Query: 318 FAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRHL 374
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H ++
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 375 VSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK--------G 426
V L+ + LV+EF LH + + MD + I L K G
Sbjct: 68 VKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGYL 485
LA+ H R++HRD+K N+LI+ +ADFGLA+ T+ V T Y
Sbjct: 119 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 173
Query: 486 APEYASSGKLTEKS-DVFSFGVMLLELITGR 515
APE K + D++S G + E++T R
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H +
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF LH + + MD + I L K
Sbjct: 64 IVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGY 484
GLA+ H R++HRD+K N+LI+ +ADFGLA+ T+ V T Y
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 485 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
APE K + D++S G + E++T R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGVLPNGK-EVAVKSLKTGSGQGEREFSA-EVEIISRVHHRHLV 375
+ + +G+G +G V K VA+K + Q + + E++I+ R H +++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHG-------ENRPVMDFATRVRIALGSAKGLA 428
+ A + ++ +E L+ N + F ++ +GL
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQI------LRGLK 158
Query: 429 YLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS--TRVMGTFGYLA 486
Y+H ++HRD+K +N+LI+ + + DFGLA++++ H H T + T Y A
Sbjct: 159 YIHS---ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRA 215
Query: 487 PEYASSGK-LTEKSDVFSFGVMLLELITGR 515
PE + K T+ D++S G +L E+++ R
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H +
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF LH + + MD + I L K
Sbjct: 67 IVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGY 484
GLA+ H R++HRD+K N+LI+ +ADFGLA+ T+ V T Y
Sbjct: 118 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 485 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
APE K + D++S G + E++T R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H +
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF LH + + MD + I L K
Sbjct: 66 IVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGY 484
GLA+ H R++HRD+K N+LI+ +ADFGLA+ T+ V T Y
Sbjct: 117 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 171
Query: 485 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
APE K + D++S G + E++T R
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H +
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF LH + + MD + I L K
Sbjct: 65 IVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGY 484
GLA+ H R++HRD+K N+LI+ +ADFGLA+ T+ V T Y
Sbjct: 116 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 170
Query: 485 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
APE K + D++S G + E++T R
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 27/211 (12%)
Query: 318 FAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRHL 374
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H ++
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 375 VSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK--------G 426
V L+ + LV+EF LH + + MD + I L K G
Sbjct: 69 VKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 119
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGYL 485
LA+ H R++HRD+K N+LI+ +ADFGLA+ T+ V T Y
Sbjct: 120 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 174
Query: 486 APEYASSGKLTEKS-DVFSFGVMLLELITGR 515
APE K + D++S G + E++T R
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 317 GFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H +
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF LH + + MD + I L K
Sbjct: 63 IVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGY 484
GLA+ H R++HRD+K N+LI+ +ADFGLA+ T+ V T Y
Sbjct: 114 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 168
Query: 485 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
APE K + D++S G + E++T R
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H +
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF LH + + MD + I L K
Sbjct: 65 IVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGY 484
GLA+ H R++HRD+K N+LI+ +ADFGLA+ T+ V T Y
Sbjct: 116 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 170
Query: 485 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
APE K + D++S G + E++T R
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 317 GFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H +
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF LH + + MD + I L K
Sbjct: 63 IVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGY 484
GLA+ H R++HRD+K N+LI+ +ADFGLA+ T+ V T Y
Sbjct: 114 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 168
Query: 485 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
APE K + D++S G + E++T R
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H +
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF LH + + MD + I L K
Sbjct: 65 IVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGY 484
GLA+ H R++HRD+K N+LI+ +ADFGLA+ T+ V T Y
Sbjct: 116 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 170
Query: 485 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
APE K + D++S G + E++T R
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 324 LGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA-EVEIISRVHHRHLVSLVGYC 381
+G+G +G V N VA++ + Q + + E++I+ R H +++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 382 IAGGQRMLVYEFVSNKTLEYHL-------HGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
A + ++ +E L H N + F ++ +GL Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIHS-- 146
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS--TRVMGTFGYLAPEYASS 492
++HRD+K +N+L++ + + DFGLA++++ +H H T + T Y APE +
Sbjct: 147 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 493 GK-LTEKSDVFSFGVMLLELITGR 515
K T+ D++S G +L E+++ R
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H +
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF LH + + MD + I L K
Sbjct: 64 IVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGY 484
GLA+ H R++HRD+K N+LI+ +ADFGLA+ T+ V T Y
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 485 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
APE K + D++S G + E++T R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 22/203 (10%)
Query: 324 LGQGGFGYVHK-GVLPNGKEVAVKSLKTGS-GQGERE-FSAEVEIISRVHHRHLVSLVGY 380
+G G +G K +GK + K L GS + E++ +EV ++ + H ++V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 381 CIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVR------IALGSAKGLAYLHEDC 434
I L +EY G+ V+ T+ R L L ++C
Sbjct: 74 IIDRTNTTLYI------VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 127
Query: 435 HPR------IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
H R ++HRD+K AN+ +D + DFGLA++ N + + +GT Y++PE
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE-DFAKEFVGTPYYMSPE 186
Query: 489 YASSGKLTEKSDVFSFGVMLLEL 511
+ EKSD++S G +L EL
Sbjct: 187 QMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 317 GFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H +
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF LH + + MD + I L K
Sbjct: 64 IVKLLDVIHTENKLYLVFEF---------LHQDLKDFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGY 484
GLA+ H R++HRD+K N+LI+ +ADFGLA+ T+ V T Y
Sbjct: 115 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 485 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
APE K + D++S G + E++T R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 31/214 (14%)
Query: 317 GFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+ ++ + +A E+ ++ ++H +
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF LH + + MD + I L K
Sbjct: 64 IVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMGTF 482
GLA+ H R++HRD+K N+LI+ +ADFGLA+ + +TH T
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TL 167
Query: 483 GYLAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
Y APE K + D++S G + E++T R
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 31/214 (14%)
Query: 317 GFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+ ++ + +A E+ ++ ++H +
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF LH + + MD + I L K
Sbjct: 63 IVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMGTF 482
GLA+ H R++HRD+K N+LI+ +ADFGLA+ + +TH T
Sbjct: 114 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TL 166
Query: 483 GYLAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
Y APE K + D++S G + E++T R
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCI 382
LG G FG VH+ G A K + T + E++ +S + H LV+L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 383 AGGQRMLVYEFVSNKTLEYHLHGE-NRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHR 441
+ +++YEF+S L + E N+ D A V KGL ++HE+ + +H
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEA--VEYMRQVCKGLCHMHENNY---VHL 279
Query: 442 DIKAANILIDD--NFEAMVADFGL-AKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEK 498
D+K NI+ + E + DFGL A L V+T GT + APE A +
Sbjct: 280 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYY 336
Query: 499 SDVFSFGVMLLELITGRRP 517
+D++S GV+ L++G P
Sbjct: 337 TDMWSVGVLSYILLSGLSP 355
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 24/210 (11%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLK-TGSGQGEREFSAEVEIISR-VHHRHLVSLVGY 380
LG+G +G V K +P+G+ +AVK ++ T + Q ++ +++I R V V+ G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 381 CIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRV------RIALGSAKGLAYLHEDC 434
G + E + +++ + V+D + +IA+ K L +LH
Sbjct: 119 LFREGDVWICMELMDTSLDKFY-----KQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 173
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGK 494
+IHRD+K +N+LI+ + + DFG++ D + T G Y+APE + +
Sbjct: 174 S--VIHRDVKPSNVLINALGQVKMCDFGISGYLVD--SVAKTIDAGCKPYMAPERINP-E 228
Query: 495 LTE-----KSDVFSFGVMLLELITGRRPVD 519
L + KSD++S G+ ++EL R P D
Sbjct: 229 LNQKGYSVKSDIWSLGITMIELAILRFPYD 258
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCI 382
LG G FG VH+ G A K + T + E++ +S + H LV+L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 383 AGGQRMLVYEFVSNKTLEYHLHGE-NRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHR 441
+ +++YEF+S L + E N+ D A V KGL ++HE+ + +H
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEA--VEYMRQVCKGLCHMHENNY---VHL 173
Query: 442 DIKAANILIDD--NFEAMVADFGL-AKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEK 498
D+K NI+ + E + DFGL A L V+T GT + APE A +
Sbjct: 174 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYY 230
Query: 499 SDVFSFGVMLLELITGRRP 517
+D++S GV+ L++G P
Sbjct: 231 TDMWSVGVLSYILLSGLSP 249
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 105/230 (45%), Gaps = 18/230 (7%)
Query: 318 FAKSNLLGQGGFG--YVHKGVL--PNGKEVAVKSLKTGS----GQGEREFSAEVEIISRV 369
F +LG G +G ++ + + GK A+K LK + + E +++ +
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 115
Query: 370 HHRHLVSLVGYCIAGGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGS-AKGL 427
+ + Y ++ L+ ++++ L HL R V+I +G L
Sbjct: 116 RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFT---EHEVQIYVGEIVLAL 172
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAP 487
+LH+ II+RDIK NIL+D N ++ DFGL+K + T + GT Y+AP
Sbjct: 173 EHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP 229
Query: 488 EYASSGKL--TEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLL 535
+ G + D +S GV++ EL+TG P + ++S E +R +L
Sbjct: 230 DIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL 279
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 93/201 (46%), Gaps = 11/201 (5%)
Query: 324 LGQGGFGYVHKGVLPNGKE-VAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLVGYC 381
LG+G G V V +E VAVK + E E+ I ++H ++V G+
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGE-NRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIH 440
G + L E+ S L + + P D A R L + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 441 RDIKAANILIDDNFEAMVADFGLAKLSN-DNHTHVSTRVMGTFGYLAPEYASSGKL-TEK 498
RDIK N+L+D+ ++DFGLA + +N + ++ GT Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 499 SDVFSFGVMLLELITGRRPVD 519
DV+S G++L ++ G P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 24/210 (11%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLK-TGSGQGEREFSAEVEIISR-VHHRHLVSLVGY 380
LG+G +G V K +P+G+ +AVK ++ T + Q ++ +++I R V V+ G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 381 CIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRV------RIALGSAKGLAYLHEDC 434
G + E + +++ + V+D + +IA+ K L +LH
Sbjct: 75 LFREGDVWICMELMDTSLDKFY-----KQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 129
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYA--- 490
+IHRD+K +N+LI+ + + DFG++ L +D + G Y+APE
Sbjct: 130 S--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA---GCKPYMAPERINPE 184
Query: 491 -SSGKLTEKSDVFSFGVMLLELITGRRPVD 519
+ + KSD++S G+ ++EL R P D
Sbjct: 185 LNQKGYSVKSDIWSLGITMIELAILRFPYD 214
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 324 LGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA-EVEIISRVHHRHLVSLVGYC 381
+G+G +G V N VA+K + Q + + E++I+ R H +++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 382 IAGGQRMLVYEFVSNKTLEYHL-------HGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
A + ++ +E L H N + F ++ +GL Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIHS-- 146
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS--TRVMGTFGYLAPEYASS 492
++HRD+K +N+L++ + + DFGLA++++ +H H + T Y APE +
Sbjct: 147 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 205
Query: 493 GK-LTEKSDVFSFGVMLLELITGR 515
K T+ D++S G +L E+++ R
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 24/207 (11%)
Query: 324 LGQGGFGYVHKGVL-PNGKEVAVKSLK-TGSGQGEREFSAEVEIISRVHH-RHLVSLVGY 380
+G G G V K G +AVK ++ +G+ + + +++++ + H ++V G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 381 CIAGGQRMLVYEFVSN--KTLEYHLHGENRPVMDFATRV--RIALGSAKGLAYLHEDCHP 436
I + E + + L+ + G P+ + R+ ++ + K L YL E
Sbjct: 93 FITNTDVFIAMELMGTCAEKLKKRMQG---PIPE---RILGKMTVAIVKALYYLKE--KH 144
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYASSGKL 495
+IHRD+K +NIL+D+ + + DFG++ +L +D R G Y+APE
Sbjct: 145 GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK---AKDRSAGCAAYMAPERIDPPDP 201
Query: 496 TE-----KSDVFSFGVMLLELITGRRP 517
T+ ++DV+S G+ L+EL TG+ P
Sbjct: 202 TKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 324 LGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA-EVEIISRVHHRHLVSLVGYC 381
+G+G +G V N VA+K + Q + + E++I+ R H +++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 382 IAGGQRMLVYEFVSNKTLEYHL-------HGENRPVMDFATRVRIALGSAKGLAYLHEDC 434
A + ++ +E L H N + F ++ +GL Y+H
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIHS-- 147
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS--TRVMGTFGYLAPEYASS 492
++HRD+K +N+L++ + + DFGLA++++ +H H + T Y APE +
Sbjct: 148 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 206
Query: 493 GK-LTEKSDVFSFGVMLLELITGR 515
K T+ D++S G +L E+++ R
Sbjct: 207 SKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 318 FAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSL---KTGSGQGEREFSAEVEIISRVH--H 371
F+ ++G+GGFG V+ + GK A+K L + QGE E ++S V
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 249
Query: 372 RHLVSLVGYCIAGGQRM-LVYEFVSNKTLEYHL--HGENRPVMDFATRVRIALGSAKGLA 428
+ + Y ++ + + ++ L YHL HG V A A GL
Sbjct: 250 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEIILGLE 305
Query: 429 YLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
++H + +++RD+K ANIL+D++ ++D GLA + H S +GT GY+APE
Sbjct: 306 HMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---VGTHGYMAPE 359
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRP 517
G + S D FS G ML +L+ G P
Sbjct: 360 VLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 18/203 (8%)
Query: 322 NLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYC 381
L+G+G FG V+ G + + ++ + + F EV + H ++V +G C
Sbjct: 39 ELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHR 441
++ ++ +TL Y + + + V+D +IA KG+ YLH I+H+
Sbjct: 99 MSPPHLAIITSLCKGRTL-YSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHK 154
Query: 442 DIKAANILIDDNFEAMVADFGLAKLS---NDNHTHVSTRVM-GTFGYLAPEY-------A 490
D+K+ N+ DN + ++ DFGL +S R+ G +LAPE
Sbjct: 155 DLKSKNVFY-DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDT 213
Query: 491 SSGKL--TEKSDVFSFGVMLLEL 511
KL ++ SDVF+ G + EL
Sbjct: 214 EEDKLPFSKHSDVFALGTIWYEL 236
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 318 FAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSL---KTGSGQGEREFSAEVEIISRVH--H 371
F+ ++G+GGFG V+ + GK A+K L + QGE E ++S V
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 372 RHLVSLVGYCIAGGQRM-LVYEFVSNKTLEYHL--HGENRPVMDFATRVRIALGSAKGLA 428
+ + Y ++ + + ++ L YHL HG V A A GL
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEIILGLE 306
Query: 429 YLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
++H + +++RD+K ANIL+D++ ++D GLA + H S +GT GY+APE
Sbjct: 307 HMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---VGTHGYMAPE 360
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRP 517
G + S D FS G ML +L+ G P
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 29/204 (14%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKT-GSGQGEREFSA-EVEIISRVHHRHLVSLVGYC 381
+G+G +G V+K G+ A+K ++ +G + E+ I+ + H ++V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFA-------TRVRIALGSAKGLAYLHEDC 434
+ +LV+E HL + + ++D T L G+AY H+
Sbjct: 70 HTKKRLVLVFE---------HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR- 119
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMGTFGYLAPE-YA 490
R++HRD+K N+LI+ E +ADFGLA+ + +TH + T Y AP+
Sbjct: 120 --RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH----EIVTLWYRAPDVLM 173
Query: 491 SSGKLTEKSDVFSFGVMLLELITG 514
S K + D++S G + E++ G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Query: 316 GGFAKSNLLGQGGFGYVH--KGVLPNGKEVAVKSL-KTG-SGQGEREFSAEVEIISRVHH 371
G + +G+G F V + VL G+EVAVK + KT + ++ EV I+ ++H
Sbjct: 15 GNYRLQKTIGKGNFAKVKLARHVL-TGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNH 73
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLH 431
++V L LV E+ S + +L R + + A + +
Sbjct: 74 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR------MKEKEARAKFRQIVSAV 127
Query: 432 EDCHPR-IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRV---MGTFGYLAP 487
+ CH + I+HRD+KA N+L+D + +ADFG + N V ++ G+ Y AP
Sbjct: 128 QYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFS-----NEFTVGNKLDTFCGSPPYAAP 182
Query: 488 EYASSGKLT-EKSDVFSFGVMLLELITGRRPVD 519
E K + DV+S GV+L L++G P D
Sbjct: 183 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 29/204 (14%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKT-GSGQGEREFSA-EVEIISRVHHRHLVSLVGYC 381
+G+G +G V+K G+ A+K ++ +G + E+ I+ + H ++V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFA-------TRVRIALGSAKGLAYLHEDC 434
+ +LV+E HL + + ++D T L G+AY H+
Sbjct: 70 HTKKRLVLVFE---------HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR- 119
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMGTFGYLAPE-YA 490
R++HRD+K N+LI+ E +ADFGLA+ + +TH T Y AP+
Sbjct: 120 --RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDVLM 173
Query: 491 SSGKLTEKSDVFSFGVMLLELITG 514
S K + D++S G + E++ G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 29/204 (14%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKT-GSGQGEREFSA-EVEIISRVHHRHLVSLVGYC 381
+G+G +G V+K G+ A+K ++ +G + E+ I+ + H ++V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 382 IAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFA-------TRVRIALGSAKGLAYLHEDC 434
+ +LV+E HL + + ++D T L G+AY H+
Sbjct: 70 HTKKRLVLVFE---------HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR- 119
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMGTFGYLAPE-YA 490
R++HRD+K N+LI+ E +ADFGLA+ + +TH T Y AP+
Sbjct: 120 --RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDVLM 173
Query: 491 SSGKLTEKSDVFSFGVMLLELITG 514
S K + D++S G + E++ G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 318 FAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSL---KTGSGQGEREFSAEVEIISRVH--H 371
F+ ++G+GGFG V+ + GK A+K L + QGE E ++S V
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 372 RHLVSLVGYCIAGGQRM-LVYEFVSNKTLEYHL--HGENRPVMDFATRVRIALGSAKGLA 428
+ + Y ++ + + ++ L YHL HG V A A GL
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEIILGLE 306
Query: 429 YLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
++H + +++RD+K ANIL+D++ ++D GLA + H S +GT GY+APE
Sbjct: 307 HMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---VGTHGYMAPE 360
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRP 517
G + S D FS G ML +L+ G P
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 318 FAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSL---KTGSGQGEREFSAEVEIISRVH--H 371
F+ ++G+GGFG V+ + GK A+K L + QGE E ++S V
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 372 RHLVSLVGYCIAGGQRM-LVYEFVSNKTLEYHL--HGENRPVMDFATRVRIALGSAKGLA 428
+ + Y ++ + + ++ L YHL HG V A A GL
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEIILGLE 306
Query: 429 YLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
++H + +++RD+K ANIL+D++ ++D GLA + H S +GT GY+APE
Sbjct: 307 HMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---VGTHGYMAPE 360
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRP 517
G + S D FS G ML +L+ G P
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 97/206 (47%), Gaps = 25/206 (12%)
Query: 324 LGQGGFGYV---HKGVLPNGKEVAVKSLKTGSGQGEREFSA-EVEIISRVHHRHLVSLVG 379
+G+G +G V + V N VA+K + Q + + E++I+ H +++ +
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHL-------HGENRPVMDFATRVRIALGSAKGLAYLHE 432
A + ++ +E L H N + F ++ +GL Y+H
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIHS 144
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS--TRVMGTFGYLAPEYA 490
++HRD+K +N+L++ + + DFGLA++++ +H H T + T Y APE
Sbjct: 145 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 491 SSGK-LTEKSDVFSFGVMLLELITGR 515
+ K T+ D++S G +L E+++ R
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 19/218 (8%)
Query: 315 TGGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQ--GEREFSAEVEIISRVHH 371
+ F +LLG+G +G V P G+ VA+K ++ R E++I+ H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIAL-GSAKGLAYL 430
+++++ ++ + ++ LH M ++ + + + + L
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS---------TRVMGT 481
H +IHRD+K +N+LI+ N + V DFGLA++ +++ S T + T
Sbjct: 129 HGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVAT 185
Query: 482 FGYLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPV 518
Y APE +S K + DV+S G +L EL RRP+
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 19/218 (8%)
Query: 315 TGGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQ--GEREFSAEVEIISRVHH 371
+ F +LLG+G +G V P G+ VA+K ++ R E++I+ H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIAL-GSAKGLAYL 430
+++++ ++ + ++ LH M ++ + + + + L
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS---------TRVMGT 481
H +IHRD+K +N+LI+ N + V DFGLA++ +++ S T + T
Sbjct: 129 HGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVAT 185
Query: 482 FGYLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPV 518
Y APE +S K + DV+S G +L EL RRP+
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 316 GGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSL---KTGSGQGEREFSAEVEIISRVHH 371
G + +G+G F V + GKEVAVK + + S ++ F EV I+ ++H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNH 72
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLH 431
++V L LV E+ S + +L R + + A + +
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR------MKEKEARAKFRQIVSAV 126
Query: 432 EDCHPR-IIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMGTFGYLAP 487
+ CH + I+HRD+KA N+L+D + +ADFG + N T G+ Y AP
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC-----GSPPYAAP 181
Query: 488 EYASSGKLT-EKSDVFSFGVMLLELITGRRPVD 519
E K + DV+S GV+L L++G P D
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 316 GGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSL---KTGSGQGEREFSAEVEIISRVHH 371
G + +G+G F V + GKEVAVK + + S ++ F EV I+ ++H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNH 72
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLH 431
++V L LV E+ S + +L R + + A + +
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR------MKEKEARAKFRQIVSAV 126
Query: 432 EDCHPR-IIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMGTFGYLAP 487
+ CH + I+HRD+KA N+L+D + +ADFG + N T G+ Y AP
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC-----GSPPYAAP 181
Query: 488 EYASSGKLT-EKSDVFSFGVMLLELITGRRPVD 519
E K + DV+S GV+L L++G P D
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H +
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF+S ++ MD + I L K
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLSMDLKDF---------MDASALTGIPLPLIKSYLFQLLQ 116
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGY 484
GLA+ H R++HRD+K N+LI+ +ADFGLA+ T+ V T Y
Sbjct: 117 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 171
Query: 485 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
APE K + D++S G + E++T R
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 97/206 (47%), Gaps = 25/206 (12%)
Query: 324 LGQGGFGYV---HKGVLPNGKEVAVKSLKTGSGQGEREFSA-EVEIISRVHHRHLVSLVG 379
+G+G +G V + V N VA+K + Q + + E++I+ H +++ +
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHL-------HGENRPVMDFATRVRIALGSAKGLAYLHE 432
A + ++ +E L H N + F ++ +GL Y+H
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIHS 144
Query: 433 DCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS--TRVMGTFGYLAPEYA 490
++HRD+K +N+L++ + + DFGLA++++ +H H T + T Y APE
Sbjct: 145 ---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 491 SSGK-LTEKSDVFSFGVMLLELITGR 515
+ K T+ D++S G +L E+++ R
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 318 FAKSNLLGQGGFGYVHKGVLPNGKE-VAVKSLKTGSGQGEREFSA--EVEIISRVHHRHL 374
+ K +G+G +G V K E VA+K ++ SA E+ ++ + H+++
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 375 VSLVGYCIAGGQRMLVYEFVSNKTLEYH--LHGENRP--VMDFATRVRIALGSAKGLAYL 430
V L + + LV+EF +Y +G+ P V F ++ KGL +
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQL------LKGLGF- 116
Query: 431 HEDCHPR-IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
CH R ++HRD+K N+LI+ N E +ADFGLA+ S V+ T Y P+
Sbjct: 117 ---CHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDV 172
Query: 490 ASSGKLTEKS-DVFSFGVMLLELITGRRPV 518
KL S D++S G + EL RP+
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 317 GFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H +
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF+S ++ MD + I L K
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSMDLKDF---------MDASALTGIPLPLIKSYLFQLLQ 117
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGY 484
GLA+ H R++HRD+K N+LI+ +ADFGLA+ T+ V T Y
Sbjct: 118 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 485 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
APE K + D++S G + E++T R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 33/223 (14%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLV- 375
F + +LGQG FG V K + + A+K ++ + S EV +++ ++H+++V
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVMLLASLNHQYVVR 66
Query: 376 ---------SLVGYCIAGGQRMLVY---EFVSNKTLEYHLHGENRPVMDFATRVRIALGS 423
+ V A ++ ++ E+ N+TL +H EN R+
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLN-QQRDEYWRLFRQI 125
Query: 424 AKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLA----------KLSNDNHTH 473
+ L+Y+H IIHRD+K NI ID++ + DFGLA KL + N
Sbjct: 126 LEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 474 VS---TRVMGTFGYLAPEYAS-SGKLTEKSDVFSFGVMLLELI 512
S T +GT Y+A E +G EK D++S G++ E+I
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 119/275 (43%), Gaps = 34/275 (12%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKT--GSGQGEREFSAEVEIISRVHHRHLVSLVGYC 381
L + G + KG G ++ VK LK S + R+F+ E + H +++ ++G C
Sbjct: 18 LNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 382 IA--GGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
+ L+ ++ +L LH V+D + V+ AL A+G+A+LH P I
Sbjct: 77 QSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT-LEPLIP 135
Query: 440 HRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKL---T 496
+ + +++ID++ A ++ +++ + S M ++APE
Sbjct: 136 RHALNSRSVMIDEDMTARIS------MADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNR 189
Query: 497 EKSDVFSFGVMLLELITGRRP-VDMTMMEDSLVEWARPLLGAALEDGIYDGLVDPRLEHN 555
+D++SF V+L EL+T P D++ ME + ALE GL P +
Sbjct: 190 RSADMWSFAVLLWELVTREVPFADLSNMEIG--------MKVALE-----GL-RPTIPPG 235
Query: 556 YVPHEMARLVACGAASIRHSARKRPKMSQIVRALE 590
PH + C + KRPK IV LE
Sbjct: 236 ISPHVSKLMKIC----MNEDPAKRPKFDMIVPILE 266
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 35/211 (16%)
Query: 324 LGQGGFGYV---HKGVLPNGKEVAVKSLKTGSGQGEREFSA-EVEIISRVHHRHLVSLVG 379
+G+G +G V + V N VA+K + Q + + E++I+ R H +++
Sbjct: 51 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG--- 105
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHL------------HGENRPVMDFATRVRIALGSAKGL 427
I R E + + L HL H N + F ++ +GL
Sbjct: 106 --INDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQI------LRGL 157
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS--TRVMGTFGYL 485
Y+H ++HRD+K +N+L++ + + DFGLA++++ +H H T + T Y
Sbjct: 158 KYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 214
Query: 486 APEYASSGK-LTEKSDVFSFGVMLLELITGR 515
APE + K T+ D++S G +L E+++ R
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 318 FAKSNLLGQGGFGYVHKGVLPNGKE-VAVKSLKTG----SGQG-EREFSAEVEIISRVHH 371
+ K + LG+G F V+K N + VA+K +K G + G R E++++ + H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLH 431
+++ L+ LV++F+ LE + +N V+ + L + +GL YLH
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFMETD-LEVIIK-DNSLVLTPSHIKAYMLMTLQGLEYLH 129
Query: 432 EDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGYLAPEYA 490
+ I+HRD+K N+L+D+N +ADFGLAK + N + V T Y APE
Sbjct: 130 QHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV--TRWYRAPELL 184
Query: 491 SSGKLT-EKSDVFSFGVMLLELI 512
++ D+++ G +L EL+
Sbjct: 185 FGARMYGVGVDMWAVGCILAELL 207
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H +
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF+S ++ MD + I L K
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSMDLKKF---------MDASALTGIPLPLIKSYLFQLLQ 117
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGY 484
GLA+ H R++HRD+K N+LI+ +ADFGLA+ T+ V T Y
Sbjct: 118 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 485 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
APE K + D++S G + E++T R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 317 GFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRH 373
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H +
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK-------- 425
+V L+ + LV+EF+S ++ MD + I L K
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLSMDLKKF---------MDASALTGIPLPLIKSYLFQLLQ 115
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGY 484
GLA+ H R++HRD+K N+LI+ +ADFGLA+ T+ V T Y
Sbjct: 116 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 170
Query: 485 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 515
APE K + D++S G + E++T R
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 29/228 (12%)
Query: 306 FTYDELAAATGGFAKSNLLGQGGFGYVHKGVLP----NGKEVAVKSL---KTGSGQGERE 358
F A + + +LG+G FG V +L G+E AVK + + +
Sbjct: 22 FVQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKES 78
Query: 359 FSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR-PVMDFATRV 417
EV+++ ++ H +++ L + G LV E + L + R +D A +
Sbjct: 79 LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII 138
Query: 418 RIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFE---AMVADFGLAKLSNDNHTHV 474
R L G+ Y+H++ +I+HRD+K N+L++ + + DFGL+ H
Sbjct: 139 RQVLS---GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-----THFEA 187
Query: 475 STRV---MGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVD 519
S ++ +GT Y+APE G EK DV+S GV+L L++G P +
Sbjct: 188 SKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 234
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 318 FAKSNLLGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREF---SAEVEIISRVHHRH 373
F +LG+G F V L +E A+K L+ E + + E +++SR+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 374 LVSLVGYCIAGGQRMLV-YEFVSNKTLEYHLHGENRPVMDF---ATRVRIALGSAKGLAY 429
V L + +++ + N L ++ R + F TR A L Y
Sbjct: 94 FVKLY-FTFQDDEKLYFGLSYAKNGCLLKYI----RKIGSFDETCTRFYTA-EIVSALEY 147
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGYLAPE 488
LH IIHRD+K NIL++++ + DFG AK LS ++ + +GT Y++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 204
Query: 489 YASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ ++ SD+++ G ++ +L+ G P
Sbjct: 205 LLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 323 LLGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQGEREFSA---EVEIISRVHHRHLVSLV 378
+LG+G FG V +E+ A+K LK + + E +++ + ++ +
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 379 GYCIAGGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPR 437
C R+ V E+V+ L YH+ + V A + GL +LH+
Sbjct: 86 HSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK--FKEPQAVFYAAEISIGLFFLHKR---G 140
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTH--VSTR-VMGTFGYLAPEYASSGK 494
II+RD+K N+++D +ADFG+ K H V+TR GT Y+APE +
Sbjct: 141 IIYRDLKLDNVMLDSEGHIKIADFGMCK----EHMMDGVTTREFCGTPDYIAPEIIAYQP 196
Query: 495 LTEKSDVFSFGVMLLELITGRRPVD 519
+ D +++GV+L E++ G+ P D
Sbjct: 197 YGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 316 GGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSL---KTGSGQGEREFSAEVEIISRVHH 371
G + +G+G F V + GKEVAVK + + S ++ F EV I+ ++H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNH 72
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLH 431
++V L LV E+ S + +L R + + A + +
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR------MKEKEARAKFRQIVSAV 126
Query: 432 EDCHPR-IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFG---YLAP 487
+ CH + I+HRD+KA N+L+D + +ADFG + N ++ G Y AP
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS-----NEFTFGNKLDAFCGAPPYAAP 181
Query: 488 EYASSGKLT-EKSDVFSFGVMLLELITGRRPVD 519
E K + DV+S GV+L L++G P D
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 29/211 (13%)
Query: 323 LLGQGGFGYVHKGVLP----NGKEVAVKSL---KTGSGQGEREFSAEVEIISRVHHRHLV 375
+LG+G FG V +L G+E AVK + + + EV+++ ++ H +++
Sbjct: 56 VLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 112
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR-PVMDFATRVRIALGSAKGLAYLHEDC 434
L + G LV E + L + R +D A +R L G+ Y+H++
Sbjct: 113 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS---GITYMHKN- 168
Query: 435 HPRIIHRDIKAANILIDD---NFEAMVADFGLAKLSNDNHTHVSTRV---MGTFGYLAPE 488
+I+HRD+K N+L++ + + DFGL+ H S ++ +GT Y+APE
Sbjct: 169 --KIVHRDLKPENLLLESKSKDANIRIIDFGLS-----THFEASKKMKDKIGTAYYIAPE 221
Query: 489 YASSGKLTEKSDVFSFGVMLLELITGRRPVD 519
G EK DV+S GV+L L++G P +
Sbjct: 222 VLH-GTYDEKCDVWSTGVILYILLSGCPPFN 251
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 29/211 (13%)
Query: 323 LLGQGGFGYVHKGVLP----NGKEVAVKSL---KTGSGQGEREFSAEVEIISRVHHRHLV 375
+LG+G FG V +L G+E AVK + + + EV+++ ++ H +++
Sbjct: 57 VLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 113
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR-PVMDFATRVRIALGSAKGLAYLHEDC 434
L + G LV E + L + R +D A +R L G+ Y+H++
Sbjct: 114 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS---GITYMHKN- 169
Query: 435 HPRIIHRDIKAANILIDD---NFEAMVADFGLAKLSNDNHTHVSTRV---MGTFGYLAPE 488
+I+HRD+K N+L++ + + DFGL+ H S ++ +GT Y+APE
Sbjct: 170 --KIVHRDLKPENLLLESKSKDANIRIIDFGLS-----THFEASKKMKDKIGTAYYIAPE 222
Query: 489 YASSGKLTEKSDVFSFGVMLLELITGRRPVD 519
G EK DV+S GV+L L++G P +
Sbjct: 223 VLH-GTYDEKCDVWSTGVILYILLSGCPPFN 252
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 316 GGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSL---KTGSGQGEREFSAEVEIISRVHH 371
G + +G+G F V + GKEVAV+ + + S ++ F EV I+ ++H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNH 72
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLH 431
++V L LV E+ S + +L R + + A + +
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR------MKEKEARAKFRQIVSAV 126
Query: 432 EDCHPR-IIHRDIKAANILIDDNFEAMVADFGLAKLSND-NHTHVSTRVMGTFGYLAPEY 489
+ CH + I+HRD+KA N+L+D + +ADFG SN+ + G+ Y APE
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFG---FSNEFTFGNKLDEFCGSPPYAAPEL 183
Query: 490 ASSGKLT-EKSDVFSFGVMLLELITGRRPVD 519
K + DV+S GV+L L++G P D
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 42/221 (19%)
Query: 323 LLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEI--ISRVHHRHLVSLVGY 380
L+G+G +G V+KG L + + VAVK + Q F E I + + H ++
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARF--- 72
Query: 381 CIAGGQR---------MLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLH 431
I G +R +LV E+ N +L +L D+ + R+A +GLAYLH
Sbjct: 73 -IVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS---DWVSSCRLAHSVTRGLAYLH 128
Query: 432 EDC------HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-------HVSTRV 478
+ P I HRD+ + N+L+ ++ +++DFGL+ N + +
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 479 MGTFGYLAPEYASSG-------KLTEKSDVFSFGVMLLELI 512
+GT Y+APE ++ D+++ G++ E+
Sbjct: 189 VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 29/209 (13%)
Query: 323 LLGQGGFGYVHKGVLP----NGKEVAVKSL---KTGSGQGEREFSAEVEIISRVHHRHLV 375
+LG+G FG V +L G+E AVK + + + EV+++ ++ H +++
Sbjct: 33 VLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 89
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR-PVMDFATRVRIALGSAKGLAYLHEDC 434
L + G LV E + L + R +D A +R L G+ Y+H++
Sbjct: 90 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS---GITYMHKN- 145
Query: 435 HPRIIHRDIKAANILIDD---NFEAMVADFGLAKLSNDNHTHVSTRV---MGTFGYLAPE 488
+I+HRD+K N+L++ + + DFGL+ H S ++ +GT Y+APE
Sbjct: 146 --KIVHRDLKPENLLLESKSKDANIRIIDFGLS-----THFEASKKMKDKIGTAYYIAPE 198
Query: 489 YASSGKLTEKSDVFSFGVMLLELITGRRP 517
G EK DV+S GV+L L++G P
Sbjct: 199 -VLHGTYDEKCDVWSTGVILYILLSGCPP 226
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 23/214 (10%)
Query: 321 SNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVH-HRHLVSLV 378
S LLG+G + V V L NGKE AVK ++ +G EVE + + +++++ L+
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 379 GYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRI 438
+ + LV+E + ++ H+ + A+RV + +A L +LH I
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAA--LDFLHTK---GI 132
Query: 439 IHRDIKAANILIDDNFE---AMVADFGLA---KLSNDNHTHVSTRVM----GTFGYLAPE 488
HRD+K NIL + + + DF L KL N++ T ++T + G+ Y+APE
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLGSGMKL-NNSCTPITTPELTTPCGSAEYMAPE 191
Query: 489 ----YASSGKLTEK-SDVFSFGVMLLELITGRRP 517
+ +K D++S GV+L +++G P
Sbjct: 192 VVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 32/216 (14%)
Query: 318 FAKSNLLGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREF---SAEVEIISRVHHRH 373
F +LG+G F V L +E A+K L+ E + + E +++SR+ H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHL-HGENRPVMDF----------ATRVRIALG 422
V L + F ++ L + L + +N ++ + TR A
Sbjct: 97 FVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-E 143
Query: 423 SAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGT 481
L YLH IIHRD+K NIL++++ + DFG AK LS ++ + +GT
Sbjct: 144 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 482 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
Y++PE + + SD+++ G ++ +L+ G P
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 316 GGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSL---KTGSGQGEREFSAEVEIISRVHH 371
G + +G+G F V + GKEVAV+ + + S ++ F EV I+ ++H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNH 72
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLH 431
++V L LV E+ S + +L R + + A + +
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR------MKEKEARAKFRQIVSAV 126
Query: 432 EDCHPR-IIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMGTFGYLAP 487
+ CH + I+HRD+KA N+L+D + +ADFG + N T G+ Y AP
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC-----GSPPYAAP 181
Query: 488 EYASSGKLT-EKSDVFSFGVMLLELITGRRPVD 519
E K + DV+S GV+L L++G P D
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 32/216 (14%)
Query: 318 FAKSNLLGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREF---SAEVEIISRVHHRH 373
F +LG+G F V L +E A+K L+ E + + E +++SR+ H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHL-HGENRPVMDF----------ATRVRIALG 422
V L + F ++ L + L + +N ++ + TR A
Sbjct: 95 FVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-E 141
Query: 423 SAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGT 481
L YLH IIHRD+K NIL++++ + DFG AK LS ++ + +GT
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 482 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
Y++PE + + SD+++ G ++ +L+ G P
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 15/210 (7%)
Query: 324 LGQGGFGYVH-KGVLPNGKEVAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLVSLVGYC 381
LG G FG VH +G E +K++ Q E AE+E++ + H +++ +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 382 IAGGQRMLVYEFVSN-KTLEYHLHGENR-PVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
+V E + LE + + R + + LAY H ++
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVV 146
Query: 440 HRDIKAANILIDDNFE---AMVADFGLAKL-SNDNHTHVSTRVMGTFGYLAPEYASSGKL 495
H+D+K NIL D + DFGLA+L +D H ST GT Y+APE +
Sbjct: 147 HKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMAPEVFKRD-V 202
Query: 496 TEKSDVFSFGVMLLELITGRRPVDMTMMED 525
T K D++S GV++ L+TG P T +E+
Sbjct: 203 TFKCDIWSAGVVMYFLLTGCLPFTGTSLEE 232
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 32/216 (14%)
Query: 318 FAKSNLLGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREF---SAEVEIISRVHHRH 373
F +LG+G F V L +E A+K L+ E + + E +++SR+ H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHL-HGENRPVMDF----------ATRVRIALG 422
V L + F ++ L + L + +N ++ + TR A
Sbjct: 95 FVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-E 141
Query: 423 SAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGT 481
L YLH IIHRD+K NIL++++ + DFG AK LS ++ + +GT
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 482 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
Y++PE + + SD+++ G ++ +L+ G P
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 32/216 (14%)
Query: 318 FAKSNLLGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREF---SAEVEIISRVHHRH 373
F +LG+G F V L +E A+K L+ E + + E +++SR+ H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHL-HGENRPVMDF----------ATRVRIALG 422
V L + F ++ L + L + +N ++ + TR A
Sbjct: 92 FVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-E 138
Query: 423 SAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGT 481
L YLH IIHRD+K NIL++++ + DFG AK LS ++ + +GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 482 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
Y++PE + + SD+++ G ++ +L+ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 316 GGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSL---KTGSGQGEREFSAEVEIISRVHH 371
G + +G+G F V + GKEVAVK + + S ++ F EV I+ ++H
Sbjct: 7 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNH 65
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSN-KTLEYHL-HGENRPVMDFATRVRIALGSAKGLAY 429
++V L LV E+ S + +Y + HG + + A + +
Sbjct: 66 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG--------WMKEKEARAKFRQIVS 117
Query: 430 LHEDCHPR-IIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMGTFGYL 485
+ CH + I+HRD+KA N+L+D + +ADFG + N T G+ Y
Sbjct: 118 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC-----GSPPYA 172
Query: 486 APEYASSGKLT-EKSDVFSFGVMLLELITGRRPVD 519
APE K + DV+S GV+L L++G P D
Sbjct: 173 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 32/216 (14%)
Query: 318 FAKSNLLGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREF---SAEVEIISRVHHRH 373
F +LG+G F V L +E A+K L+ E + + E +++SR+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHL-HGENRPVMDF----------ATRVRIALG 422
V L + F ++ L + L + +N ++ + TR A
Sbjct: 94 FVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-E 140
Query: 423 SAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGT 481
L YLH IIHRD+K NIL++++ + DFG AK LS ++ + +GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 482 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
Y++PE + + SD+++ G ++ +L+ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 32/216 (14%)
Query: 318 FAKSNLLGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREF---SAEVEIISRVHHRH 373
F +LG+G F V L +E A+K L+ E + + E +++SR+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHL-HGENRPVMDF----------ATRVRIALG 422
V L + F ++ L + L + +N ++ + TR A
Sbjct: 94 FVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-E 140
Query: 423 SAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGT 481
L YLH IIHRD+K NIL++++ + DFG AK LS ++ + +GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 482 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
Y++PE + + SD+++ G ++ +L+ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 318 FAKSNLLGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREF---SAEVEIISRVHHRH 373
F +LG+G F V L +E A+K L+ E + + E +++SR+ H
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGE----NRPVMDF---ATRVRIALGSAKG 426
V L Y L + L Y +GE R + F TR A
Sbjct: 72 FVKL--YFTFQDDEKLYF------GLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSA 122
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGYL 485
L YLH IIHRD+K NIL++++ + DFG AK LS ++ + +GT Y+
Sbjct: 123 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 179
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+PE + + SD+++ G ++ +L+ G P
Sbjct: 180 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 32/216 (14%)
Query: 318 FAKSNLLGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREF---SAEVEIISRVHHRH 373
F +LG+G F V L +E A+K L+ E + + E +++SR+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHL-HGENRPVMDF----------ATRVRIALG 422
V L + F ++ L + L + +N ++ + TR A
Sbjct: 94 FVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-E 140
Query: 423 SAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGT 481
L YLH IIHRD+K NIL++++ + DFG AK LS ++ + +GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 482 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
Y++PE + + SD+++ G ++ +L+ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 318 FAKSNLLGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREF---SAEVEIISRVHHRH 373
F +LG+G F V L +E A+K L+ E + + E +++SR+ H
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGE----NRPVMDF---ATRVRIALGSAKG 426
V L Y L + L Y +GE R + F TR A
Sbjct: 71 FVKL--YFTFQDDEKLYF------GLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSA 121
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGYL 485
L YLH IIHRD+K NIL++++ + DFG AK LS ++ + +GT Y+
Sbjct: 122 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 178
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+PE + + SD+++ G ++ +L+ G P
Sbjct: 179 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 16/199 (8%)
Query: 323 LLGQGGFGYVHKGVLPN-GKEVAVKS-LKTGSGQGEREFSA-EVEIISRVHHRHLVSLVG 379
L+G+G +G V K + G+ VA+K L++ + ++ + E++++ ++ H +LV+L+
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 380 YCIAGGQRMLVYEFVSNKTL---EYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
C + LV+EFV + L E +G +D+ + G+ + H
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPNG-----LDYQVVQKYLFQIINGIGFCHSH--- 143
Query: 437 RIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE-YASSGKL 495
IIHRDIK NIL+ + + DFG A+ + V + T Y APE K
Sbjct: 144 NIIHRDIKPENILVSQSGVVKLCDFGFAR-TLAAPGEVYDDEVATRWYRAPELLVGDVKY 202
Query: 496 TEKSDVFSFGVMLLELITG 514
+ DV++ G ++ E+ G
Sbjct: 203 GKAVDVWAIGCLVTEMFMG 221
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 32/216 (14%)
Query: 318 FAKSNLLGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREF---SAEVEIISRVHHRH 373
F +LG+G F V L +E A+K L+ E + + E +++SR+ H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHL-HGENRPVMDF----------ATRVRIALG 422
V L + F ++ L + L + +N ++ + TR A
Sbjct: 92 FVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-E 138
Query: 423 SAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGT 481
L YLH IIHRD+K NIL++++ + DFG AK LS ++ + +GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 482 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
Y++PE + + SD+++ G ++ +L+ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 32/216 (14%)
Query: 318 FAKSNLLGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREF---SAEVEIISRVHHRH 373
F +LG+G F V L +E A+K L+ E + + E +++SR+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHL-HGENRPVMDF----------ATRVRIALG 422
V L + F ++ L + L + +N ++ + TR A
Sbjct: 94 FVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-E 140
Query: 423 SAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGT 481
L YLH IIHRD+K NIL++++ + DFG AK LS ++ + +GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 482 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
Y++PE + + SD+++ G ++ +L+ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 19/218 (8%)
Query: 315 TGGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQ--GEREFSAEVEIISRVHH 371
+ F +LLG+G +G V P G+ VA+K ++ R E++I+ H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIAL-GSAKGLAYL 430
+++++ ++ + ++ LH M ++ + + + + L
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS---------TRVMGT 481
H +IHRD+K +N+LI+ N + V DFGLA++ +++ S + T
Sbjct: 129 HGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVAT 185
Query: 482 FGYLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPV 518
Y APE +S K + DV+S G +L EL RRP+
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 324 LGQGGFGYVH--KGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYC 381
LG+GGF YV +G L +G A+K + Q E E ++ +H +++ LV YC
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95
Query: 382 I----AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIA---LGSAKGLAYLHEDC 434
+ A + L+ F TL + + +F T +I LG +GL +H
Sbjct: 96 LRERGAKHEAWLLLPFFKRGTLWNEIE-RLKDKGNFLTEDQILWLLLGICRGLEAIHAKG 154
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHV--STRVM---------GTFG 483
+ HRD+K NIL+ D + ++ D G N HV S + + T
Sbjct: 155 YA---HRDLKPTNILLGDEGQPVLMDLGSM---NQACIHVEGSRQALTLQDWAAQRCTIS 208
Query: 484 YLAPEYASSGK---LTEKSDVFSFGVMLLELITGRRPVDMT 521
Y APE S + E++DV+S G +L ++ G P DM
Sbjct: 209 YRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMV 249
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 318 FAKSNLLGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREF---SAEVEIISRVHHRH 373
F +LG+G F V L +E A+K L+ E + + E +++SR+ H
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGE----NRPVMDF---ATRVRIALGSAKG 426
V L Y L + L Y +GE R + F TR A
Sbjct: 69 FVKL--YFTFQDDEKLYF------GLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSA 119
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGYL 485
L YLH IIHRD+K NIL++++ + DFG AK LS ++ + +GT Y+
Sbjct: 120 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 176
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+PE + + SD+++ G ++ +L+ G P
Sbjct: 177 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 318 FAKSNLLGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREF---SAEVEIISRVHHRH 373
F +LG+G F V L +E A+K L+ E + + E +++SR+ H
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGE----NRPVMDF---ATRVRIALGSAKG 426
V L Y L + L Y +GE R + F TR A
Sbjct: 70 FVKL--YFTFQDDEKLYF------GLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSA 120
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGYL 485
L YLH IIHRD+K NIL++++ + DFG AK LS ++ + +GT Y+
Sbjct: 121 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 177
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+PE + + SD+++ G ++ +L+ G P
Sbjct: 178 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 318 FAKSNLLGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREF---SAEVEIISRVHHRH 373
F +LG+G F V L +E A+K L+ E + + E +++SR+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGE----NRPVMDF---ATRVRIALGSAKG 426
V L Y L + L Y +GE R + F TR A
Sbjct: 94 FVKL--YFTFQDDEKLYF------GLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSA 144
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGYL 485
L YLH IIHRD+K NIL++++ + DFG AK LS ++ + +GT Y+
Sbjct: 145 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+PE + + SD+++ G ++ +L+ G P
Sbjct: 202 SPELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 32/216 (14%)
Query: 318 FAKSNLLGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREF---SAEVEIISRVHHRH 373
F +LG+G F V L +E A+K L+ E + + E +++SR+ H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHL-HGENRPVMDF----------ATRVRIALG 422
V L + F ++ L + L + +N ++ + TR A
Sbjct: 92 FVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-E 138
Query: 423 SAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGT 481
L YLH IIHRD+K NIL++++ + DFG AK LS ++ + +GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 482 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
Y++PE + + SD+++ G ++ +L+ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 32/216 (14%)
Query: 318 FAKSNLLGQGGFGY-VHKGVLPNGKEVAVKSLKTGSGQGEREF---SAEVEIISRVHHRH 373
F +LG+G F V L +E A+K L+ E + + E +++SR+ H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHL-HGENRPVMDF----------ATRVRIALG 422
V L + F ++ L + L + +N ++ + TR A
Sbjct: 92 FVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-E 138
Query: 423 SAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGT 481
L YLH IIHRD+K NIL++++ + DFG AK LS ++ + +GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 482 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
Y++PE + + SD+++ G ++ +L+ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 32/216 (14%)
Query: 318 FAKSNLLGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREF---SAEVEIISRVHHRH 373
F +LG+G F V L +E A+K L+ E + + E +++SR+ H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHL-HGENRPVMDF----------ATRVRIALG 422
V L + F ++ L + L + +N ++ + TR A
Sbjct: 91 FVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-E 137
Query: 423 SAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGT 481
L YLH IIHRD+K NIL++++ + DFG AK LS ++ + +GT
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 482 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
Y++PE + + SD+++ G ++ +L+ G P
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 324 LGQGGFGYVHKGVLPNGKE----VAVKSLKTGSGQGE---REFSAEVEIISRVHHRHLVS 376
LG+G FG V+ L K+ VA+K L + E + E+EI + +HH +++
Sbjct: 31 LGKGKFGNVY---LAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILR 87
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH- 435
L Y + L+ E+ L L + D I A L Y CH
Sbjct: 88 LYNYFYDRRRIYLILEYAPRGELYKEL--QKSCTFDEQRTATIMEELADALMY----CHG 141
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKL 495
++IHRDIK N+L+ E +ADFG S + + GT YL PE
Sbjct: 142 KKVIHRDIKPENLLLGLKGELKIADFGW---SVHAPSLRRKTMCGTLDYLPPEMIEGRMH 198
Query: 496 TEKSDVFSFGVMLLELITGRRPVD 519
EK D++ GV+ EL+ G P +
Sbjct: 199 NEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 32/216 (14%)
Query: 318 FAKSNLLGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREF---SAEVEIISRVHHRH 373
F +LG+G F V L +E A+K L+ E + + E +++SR+ H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHL-HGENRPVMDF----------ATRVRIALG 422
V L + F ++ L + L + +N ++ + TR A
Sbjct: 91 FVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-E 137
Query: 423 SAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGT 481
L YLH IIHRD+K NIL++++ + DFG AK LS ++ + +GT
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 482 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
Y++PE + + SD+++ G ++ +L+ G P
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 316 GGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSL-KTG-SGQGEREFSAEVEIISRVHHR 372
G + +G+G F V + G+EVA+K + KT + ++ EV I+ ++H
Sbjct: 12 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 373 HLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE 432
++V L L+ E+ S + +L R + + A + + +
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR------MKEKEARSKFRQIVSAVQ 125
Query: 433 DCH-PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRV---MGTFGYLAPE 488
CH RI+HRD+KA N+L+D + +ADFG + N V ++ G+ Y APE
Sbjct: 126 YCHQKRIVHRDLKAENLLLDADMNIKIADFGFS-----NEFTVGGKLDTFCGSPPYAAPE 180
Query: 489 YASSGKLT-EKSDVFSFGVMLLELITGRRPVD 519
K + DV+S GV+L L++G P D
Sbjct: 181 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 32/216 (14%)
Query: 318 FAKSNLLGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREF---SAEVEIISRVHHRH 373
F +LG+G F V L +E A+K L+ E + + E +++SR+ H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHL-HGENRPVMDF----------ATRVRIALG 422
V L + F ++ L + L + +N ++ + TR A
Sbjct: 76 FVKLY------------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-E 122
Query: 423 SAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGT 481
L YLH IIHRD+K NIL++++ + DFG AK LS ++ + +GT
Sbjct: 123 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 482 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
Y++PE + + SD+++ G ++ +L+ G P
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 17/208 (8%)
Query: 318 FAKSNLLGQGGFGYVHKGVL----PNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVH 370
F LLG+G FG V +L G+ A+K LK + E + E ++
Sbjct: 150 FEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 206
Query: 371 HRHLVSLVGYCIAGGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
H L +L Y R+ V E+ + L +HL E D A + SA L Y
Sbjct: 207 HPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA--LDY 263
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
LH + + +++RD+K N+++D + + DFGL K + + T GT YLAPE
Sbjct: 264 LHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAPEV 320
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
D + GV++ E++ GR P
Sbjct: 321 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 19/212 (8%)
Query: 316 GGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSL-KTG-SGQGEREFSAEVEIISRVHHR 372
G + +G+G F V + G+EVA+K + KT + ++ EV I+ ++H
Sbjct: 15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 373 HLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE 432
++V L L+ E+ S + +L R + + A + + +
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR------MKEKEARSKFRQIVSAVQ 128
Query: 433 DCH-PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFG---YLAPE 488
CH RI+HRD+KA N+L+D + +ADFG + N V ++ G Y APE
Sbjct: 129 YCHQKRIVHRDLKAENLLLDADMNIKIADFGFS-----NEFTVGGKLDAFCGAPPYAAPE 183
Query: 489 YASSGKLT-EKSDVFSFGVMLLELITGRRPVD 519
K + DV+S GV+L L++G P D
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 102/223 (45%), Gaps = 33/223 (14%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLV- 375
F + +LGQG FG V K + + A+K ++ + S EV +++ ++H+++V
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVMLLASLNHQYVVR 66
Query: 376 ---------SLVGYCIAGGQRMLVY---EFVSNKTLEYHLHGENRPVMDFATRVRIALGS 423
+ V A ++ ++ E+ N TL +H EN R+
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLN-QQRDEYWRLFRQI 125
Query: 424 AKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLA----------KLSNDNHTH 473
+ L+Y+H IIHRD+K NI ID++ + DFGLA KL + N
Sbjct: 126 LEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 474 VS---TRVMGTFGYLAPEYAS-SGKLTEKSDVFSFGVMLLELI 512
S T +GT Y+A E +G EK D++S G++ E+I
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 17/208 (8%)
Query: 318 FAKSNLLGQGGFGYVHKGVL----PNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVH 370
F LLG+G FG V +L G+ A+K LK + E + E ++
Sbjct: 153 FEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 209
Query: 371 HRHLVSLVGYCIAGGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
H L +L Y R+ V E+ + L +HL E D A + SA L Y
Sbjct: 210 HPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA--LDY 266
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
LH + + +++RD+K N+++D + + DFGL K + + T GT YLAPE
Sbjct: 267 LHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAPEV 323
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
D + GV++ E++ GR P
Sbjct: 324 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 27/211 (12%)
Query: 318 FAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRHL 374
F K +G+G +G V+K G+ VA+K ++ + +A E+ ++ ++H ++
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 375 VSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK--------G 426
V L+ + LV+E H+ + + MD + I L K G
Sbjct: 68 VKLLDVIHTENKLYLVFE---------HVDQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTRVMGTFGYL 485
LA+ H R++HRD+K N+LI+ +ADFGLA+ T+ V T Y
Sbjct: 119 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 173
Query: 486 APEYASSGKLTEKS-DVFSFGVMLLELITGR 515
APE K + D++S G + E++T R
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 316 GGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSL---KTGSGQGEREFSAEVEIISRVHH 371
G + +G+G F V + GKEVAVK + + S ++ F EV I ++H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNH 72
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLH 431
++V L LV E+ S + +L R + + A + +
Sbjct: 73 PNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGR------XKEKEARAKFRQIVSAV 126
Query: 432 EDCHPR-IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFG---YLAP 487
+ CH + I+HRD+KA N+L+D + +ADFG + N ++ G Y AP
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADXNIKIADFGFS-----NEFTFGNKLDAFCGAPPYAAP 181
Query: 488 EYASSGKLT-EKSDVFSFGVMLLELITGRRPVD 519
E K + DV+S GV+L L++G P D
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 39/236 (16%)
Query: 309 DEL---AAATGGFAK---SNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSA 361
DEL AAA + K +++G+G V + V G E AVK ++ + + E
Sbjct: 81 DELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLE 140
Query: 362 EVEIISRVH---------HRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMD 412
EV +R H H+++L+ + LV++ + L +L E + +
Sbjct: 141 EVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-TEKVALSE 199
Query: 413 FATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT 472
TR I + +++LH + I+HRD+K NIL+DDN + ++DFG +
Sbjct: 200 KETR-SIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFS-------C 248
Query: 473 HVST-----RVMGTFGYLAPEYASSGK------LTEKSDVFSFGVMLLELITGRRP 517
H+ + GT GYLAPE ++ D+++ GV+L L+ G P
Sbjct: 249 HLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 114/244 (46%), Gaps = 34/244 (13%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLV 375
+ + ++G G FG V++ L + G+ VA+K + Q +R + E++I+ ++ H ++V
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 112
Query: 376 SLVGYCIAGGQRM------LVYEFVSNKTLEYHLH----GENRPVMDFATRVRIALGSA- 424
L + + G++ LV ++V H + PV+ V++ +
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI----YVKLYMYQLF 168
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAM-VADFGLAKL---SNDNHTHVSTRVMG 480
+ LAY+H I HRDIK N+L+D + + + DFG AK N +++ +R
Sbjct: 169 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 223
Query: 481 TFGYLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAAL 539
Y APE + T DV+S G +L EL+ G+ D LVE + +LG
Sbjct: 224 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLGTPT 279
Query: 540 EDGI 543
+ I
Sbjct: 280 REQI 283
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 114/244 (46%), Gaps = 34/244 (13%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLV 375
+ + ++G G FG V++ L + G+ VA+K + Q +R + E++I+ ++ H ++V
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 114
Query: 376 SLVGYCIAGGQRM------LVYEFVSNKTLEYHLH----GENRPVMDFATRVRIALGSA- 424
L + + G++ LV ++V H + PV+ V++ +
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI----YVKLYMYQLF 170
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAM-VADFGLAKL---SNDNHTHVSTRVMG 480
+ LAY+H I HRDIK N+L+D + + + DFG AK N +++ +R
Sbjct: 171 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 225
Query: 481 TFGYLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAAL 539
Y APE + T DV+S G +L EL+ G+ D LVE + +LG
Sbjct: 226 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLGTPT 281
Query: 540 EDGI 543
+ I
Sbjct: 282 REQI 285
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 11/202 (5%)
Query: 323 LLGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQGEREFSA---EVEIISRVHHRHLVSLV 378
+LG+G FG V E+ AVK LK + + E +++ ++ +
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 379 GYCIAGGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPR 437
C R+ V E+V+ L YH+ R A V A A GL +L
Sbjct: 408 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA--VFYAAEIAIGLFFLQSK---G 462
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
II+RD+K N+++D +ADFG+ K N + GT Y+APE + +
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCK-ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGK 521
Query: 498 KSDVFSFGVMLLELITGRRPVD 519
D ++FGV+L E++ G+ P +
Sbjct: 522 SVDWWAFGVLLYEMLAGQAPFE 543
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 318 FAKSNLLGQGGFGYVHKGVLPNGKE-VAVKSLKTGSGQGEREFSA--EVEIISRVHHRHL 374
+ K +G+G +G V K E VA+K ++ SA E+ ++ + H+++
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 375 VSLVGYCIAGGQRMLVYEFVSNKTLEYH--LHGENRP--VMDFATRVRIALGSAKGLAYL 430
V L + + LV+EF +Y +G+ P V F ++ KGL +
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQL------LKGLGF- 116
Query: 431 HEDCHPR-IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
CH R ++HRD+K N+LI+ N E +A+FGLA+ S V+ T Y P+
Sbjct: 117 ---CHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDV 172
Query: 490 ASSGKLTEKS-DVFSFGVMLLELITGRRPV 518
KL S D++S G + EL RP+
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 114/244 (46%), Gaps = 34/244 (13%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLV 375
+ + ++G G FG V++ L + G+ VA+K + Q +R + E++I+ ++ H ++V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 110
Query: 376 SLVGYCIAGGQRM------LVYEFVSNKTLEYHLH----GENRPVMDFATRVRIALGSA- 424
L + + G++ LV ++V H + PV+ V++ +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI----YVKLYMYQLF 166
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAM-VADFGLAKL---SNDNHTHVSTRVMG 480
+ LAY+H I HRDIK N+L+D + + + DFG AK N +++ +R
Sbjct: 167 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 221
Query: 481 TFGYLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAAL 539
Y APE + T DV+S G +L EL+ G+ D LVE + +LG
Sbjct: 222 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLGTPT 277
Query: 540 EDGI 543
+ I
Sbjct: 278 REQI 281
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 105/221 (47%), Gaps = 38/221 (17%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLK---TGSGQGEREFSAEVEIISRVH-HRHLVSLV 378
LG+G +G V K + G+ VAVK + S +R F E+ I++ + H ++V+L+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLL 75
Query: 379 GYCIAGGQR--MLVYEFVSNKTLEYHLHGENRP-VMDFATRVRIALGSAKGLAYLHEDCH 435
A R LV+++ +E LH R +++ + + K + YLH
Sbjct: 76 NVLRADNDRDVYLVFDY-----METDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG- 129
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAK-------------LSNDNHTH-------VS 475
++HRD+K +NIL++ VADFGL++ LS + +T +
Sbjct: 130 --LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 476 TRVMGTFGYLAPE-YASSGKLTEKSDVFSFGVMLLELITGR 515
T + T Y APE S K T+ D++S G +L E++ G+
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 28/241 (11%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLV 375
+ + ++G G FG V++ L + G+ VA+K + Q +R + E++I+ ++ H ++V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 110
Query: 376 SLVGYCIAGGQRM------LVYEFVSNKTLEYHLH----GENRPVMDFATRVRIALGSA- 424
L + + G++ LV ++V H + PV+ V++ +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI----YVKLYMYQLF 166
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAM-VADFGLAKLSNDNHTHVSTRVMGTFG 483
+ LAY+H I HRDIK N+L+D + + + DFG AK +VS + +
Sbjct: 167 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRY 221
Query: 484 YLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDG 542
Y APE + T DV+S G +L EL+ G+ D LVE + +LG +
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLGTPTREQ 280
Query: 543 I 543
I
Sbjct: 281 I 281
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLV 375
+ + ++G G FG V++ L + G+ VA+K + G RE ++I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE----LQIMRKLDHCNIV 76
Query: 376 SLVGYCIAGGQRM------LVYEFVSNKTLEYHLH----GENRPVMDFATRVRIALGSA- 424
L + + G++ LV ++V H + PV+ V++ +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI----YVKLYMYQLF 132
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAM-VADFGLAKL---SNDNHTHVSTRVMG 480
+ LAY+H I HRDIK N+L+D + + + DFG AK N +++ +R
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 187
Query: 481 TFGYLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAAL 539
Y APE + T DV+S G +L EL+ G+ D LVE + +LG
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLGTPT 243
Query: 540 EDGI 543
+ I
Sbjct: 244 REQI 247
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 114/244 (46%), Gaps = 34/244 (13%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLV 375
+ + ++G G FG V++ L + G+ VA+K + Q +R + E++I+ ++ H ++V
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 104
Query: 376 SLVGYCIAGGQRM------LVYEFVSNKTLEYHLH----GENRPVMDFATRVRIALGSA- 424
L + + G++ LV ++V H + PV+ V++ +
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI----YVKLYMYQLF 160
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAM-VADFGLAKL---SNDNHTHVSTRVMG 480
+ LAY+H I HRDIK N+L+D + + + DFG AK N +++ +R
Sbjct: 161 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 215
Query: 481 TFGYLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAAL 539
Y APE + T DV+S G +L EL+ G+ D LVE + +LG
Sbjct: 216 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLGTPT 271
Query: 540 EDGI 543
+ I
Sbjct: 272 REQI 275
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 114/244 (46%), Gaps = 34/244 (13%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLV 375
+ + ++G G FG V++ L + G+ VA+K + Q +R + E++I+ ++ H ++V
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 155
Query: 376 SLVGYCIAGGQRM------LVYEFVSNKTLEYHLH----GENRPVMDFATRVRIALGSA- 424
L + + G++ LV ++V H + PV+ V++ +
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI----YVKLYMYQLF 211
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAM-VADFGLAKL---SNDNHTHVSTRVMG 480
+ LAY+H I HRDIK N+L+D + + + DFG AK N +++ +R
Sbjct: 212 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 266
Query: 481 TFGYLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAAL 539
Y APE + T DV+S G +L EL+ G+ D LVE + +LG
Sbjct: 267 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLGTPT 322
Query: 540 EDGI 543
+ I
Sbjct: 323 REQI 326
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLK-TGSGQGEREFSAEVEIISR-VHHRHLVSLVGY 380
LG+G +G V K +P+G+ AVK ++ T + Q ++ +++I R V V+ G
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 381 CIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRV------RIALGSAKGLAYLHEDC 434
G + E +++ + V+D + +IA+ K L +LH
Sbjct: 102 LFREGDVWICXELXDTSLDKFY-----KQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 156
Query: 435 HPRIIHRDIKAANILIDDNFEAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYA--- 490
+IHRD+K +N+LI+ + DFG++ L +D + G Y APE
Sbjct: 157 S--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA---GCKPYXAPERINPE 211
Query: 491 -SSGKLTEKSDVFSFGVMLLELITGRRPVD 519
+ + KSD++S G+ +EL R P D
Sbjct: 212 LNQKGYSVKSDIWSLGITXIELAILRFPYD 241
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLV 375
+ + ++G G FG V++ L + G+ VA+K + G RE ++I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE----LQIMRKLDHCNIV 76
Query: 376 SLVGYCIAGGQRM------LVYEFVSNKTLEYHLH----GENRPVMDFATRVRIALGSA- 424
L + + G++ LV ++V H + PV+ V++ +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI----YVKLYMYQLF 132
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAM-VADFGLAKL---SNDNHTHVSTRVMG 480
+ LAY+H I HRDIK N+L+D + + + DFG AK N +++ +R
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 187
Query: 481 TFGYLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAAL 539
Y APE + T DV+S G +L EL+ G+ D LVE + +LG
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLGTPT 243
Query: 540 EDGI 543
+ I
Sbjct: 244 REQI 247
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 111/241 (46%), Gaps = 28/241 (11%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLV 375
+ + ++G G FG V++ L + G+ VA+K + G RE ++I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE----LQIMRKLDHCNIV 76
Query: 376 SLVGYCIAGGQRM------LVYEFVSNKTLEYHLH----GENRPVMDFATRVRIALGSA- 424
L + + G++ LV ++V H + PV+ V++ +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVI----YVKLYMYQLF 132
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAM-VADFGLAKLSNDNHTHVSTRVMGTFG 483
+ LAY+H I HRDIK N+L+D + + + DFG AK +VS + +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRY 187
Query: 484 YLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDG 542
Y APE + T DV+S G +L EL+ G+ D LVE + +LG +
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLGTPTREQ 246
Query: 543 I 543
I
Sbjct: 247 I 247
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 91/217 (41%), Gaps = 25/217 (11%)
Query: 318 FAKSNLLGQGGFGYVHKGVLPNG-KEVAVKSLKTGSGQGER-------------EFSAEV 363
+ K LG G +G V NG E A+K +K R E E+
Sbjct: 38 YFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEI 97
Query: 364 EIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGS 423
++ + H +++ L LV EF L + NR D I
Sbjct: 98 SLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQII--NRHKFDECDAANIMKQI 155
Query: 424 AKGLAYLHEDCHPRIIHRDIKAANILIDDN---FEAMVADFGLAKLSNDNHTHVSTRVMG 480
G+ YLH+ I+HRDIK NIL+++ + DFGL+ + ++ + R +G
Sbjct: 156 LSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK-LRDR-LG 210
Query: 481 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
T Y+APE K EK DV+S GV++ L+ G P
Sbjct: 211 TAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 35/223 (15%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRHL 374
+ K +GQG FG V K G++VA+K + + + +A E++I+ + H ++
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 375 VSLVGYCI--------AGGQRMLVYEFVSNKTLEYHLHGENRPVM---DFATRVRIALGS 423
V+L+ C G LV++F E+ L G V+ + R+
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFC-----EHDLAGLLSNVLVKFTLSEIKRVMQML 134
Query: 424 AKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMG 480
GL Y+H + +I+HRD+KAAN+LI + +ADFGLA+ L+ ++ + +
Sbjct: 135 LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 481 TFGYLAPEYASSGKLTEKS-----DVFSFGVMLLELITGRRPV 518
T Y PE L E+ D++ G ++ E+ T R P+
Sbjct: 192 TLWYRPPELL----LGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 93/211 (44%), Gaps = 16/211 (7%)
Query: 316 GGFAKSNL-LGQGGFGYVHKGV-LPNGKEVAVKSLKTGS-GQGERE-FSAEVEIISRVHH 371
G F K ++ +G+G F V+KG+ EVA L+ + ER+ F E E + + H
Sbjct: 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQH 84
Query: 372 RHLVSLVG--YCIAGGQR--MLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGL 427
++V G++ +LV E ++ TL+ +L + V KGL
Sbjct: 85 PNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYL--KRFKVXKIKVLRSWCRQILKGL 142
Query: 428 AYLHEDCHPRIIHRDIKAANILID-DNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLA 486
+LH P IIHRD+K NI I + D GLA L + V+GT + A
Sbjct: 143 QFLHTRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAKAVIGTPEFXA 198
Query: 487 PEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
PE K E DV++FG LE T P
Sbjct: 199 PEXYEE-KYDESVDVYAFGXCXLEXATSEYP 228
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 28/241 (11%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLV 375
+ + ++G G FG V++ L + G+ VA+K + Q +R + E++I+ ++ H ++V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 88
Query: 376 SLVGYCIAGGQRM------LVYEFVSNKTLEYHLH----GENRPVMDFATRVRIALGSA- 424
L + + G++ LV ++V H + PV+ V++ +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI----YVKLYMYQLF 144
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAM-VADFGLAKLSNDNHTHVSTRVMGTFG 483
+ LAY+H I HRDIK N+L+D + + + DFG AK +VS + +
Sbjct: 145 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRY 199
Query: 484 YLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDG 542
Y APE + T DV+S G +L EL+ G+ D LVE + +LG +
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLGTPTREQ 258
Query: 543 I 543
I
Sbjct: 259 I 259
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 11/202 (5%)
Query: 323 LLGQGGFGYVHKGVLPNGKEV-AVKSLKTGSGQGEREFSA---EVEIISRVHHRHLVSLV 378
+LG+G FG V E+ AVK LK + + E +++ ++ +
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 379 GYCIAGGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPR 437
C R+ V E+V+ L YH+ R A V A A GL +L
Sbjct: 87 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA--VFYAAEIAIGLFFLQSK---G 141
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
II+RD+K N+++D +ADFG+ K N + GT Y+APE + +
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCK-ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGK 200
Query: 498 KSDVFSFGVMLLELITGRRPVD 519
D ++FGV+L E++ G+ P +
Sbjct: 201 SVDWWAFGVLLYEMLAGQAPFE 222
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 33/223 (14%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLV- 375
F + +LGQG FG V K + + A+K ++ + S EV +++ ++H+++V
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVXLLASLNHQYVVR 66
Query: 376 ---------SLVGYCIAGGQRMLVY---EFVSNKTLEYHLHGENRPVMDFATRVRIALGS 423
+ V A ++ ++ E+ N+TL +H EN R+
Sbjct: 67 YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLN-QQRDEYWRLFRQI 125
Query: 424 AKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLA----------KLSNDNHTH 473
+ L+Y+H IIHR++K NI ID++ + DFGLA KL + N
Sbjct: 126 LEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 474 VS---TRVMGTFGYLAPEYAS-SGKLTEKSDVFSFGVMLLELI 512
S T +GT Y+A E +G EK D +S G++ E I
Sbjct: 183 SSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 28/241 (11%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLV 375
+ + ++G G FG V++ L + G+ VA+K + Q +R + E++I+ ++ H ++V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 88
Query: 376 SLVGYCIAGGQRM------LVYEFVSNKTLEYHLH----GENRPVMDFATRVRIALGSA- 424
L + + G++ LV ++V H + PV+ V++ +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI----YVKLYMYQLF 144
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAM-VADFGLAKLSNDNHTHVSTRVMGTFG 483
+ LAY+H I HRDIK N+L+D + + + DFG AK +VS + +
Sbjct: 145 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRY 199
Query: 484 YLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDG 542
Y APE + T DV+S G +L EL+ G+ D LVE + +LG +
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLGTPTREQ 258
Query: 543 I 543
I
Sbjct: 259 I 259
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 15/208 (7%)
Query: 321 SNLLGQGGFGYVHKGV-LPNGKEVAVK-----SLKTGSGQGEREFSAEVEIISRVHHRHL 374
++G+G F V + + G++ AVK + G + E I + H H+
Sbjct: 29 CEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 375 VSLVGYCIAGGQRMLVYEFVSNKTLEYHL--HGENRPVMDFATRVRIALGSAKGLAYLHE 432
V L+ + G +V+EF+ L + + + V A + L Y H+
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148
Query: 433 DCHPRIIHRDIKAANILI---DDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
+ IIHRD+K N+L+ +++ + DFG+A ++ RV GT ++APE
Sbjct: 149 N---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV-GTPHFMAPEV 204
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ DV+ GV+L L++G P
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 114/244 (46%), Gaps = 34/244 (13%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLV 375
+ + ++G G FG V++ L + G+ VA+K + Q +R + E++I+ ++ H ++V
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 81
Query: 376 SLVGYCIAGGQRM------LVYEFVSNKTLEYHLH----GENRPVMDFATRVRIALGSA- 424
L + + G++ LV ++V H + PV+ V++ +
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI----YVKLYMYQLF 137
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAM-VADFGLAKL---SNDNHTHVSTRVMG 480
+ LAY+H I HRDIK N+L+D + + + DFG AK N +++ +R
Sbjct: 138 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 192
Query: 481 TFGYLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAAL 539
Y APE + T DV+S G +L EL+ G+ D LVE + +LG
Sbjct: 193 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLGTPT 248
Query: 540 EDGI 543
+ I
Sbjct: 249 REQI 252
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 18/208 (8%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVS 376
+ ++G G FG V + L EVA+K + Q +R + E++I+ V H ++V
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVL----QDKRFKNRELQIMRIVKHPNVVD 96
Query: 377 LVGYCIAGGQRM------LVYEFVSNKTLEYHLH-GENRPVMDFATRVRIALGSAKGLAY 429
L + + G + LV E+V H + + M + LAY
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAY 156
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAM-VADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
+H I HRDIK N+L+D + + DFG AK+ +VS + + Y APE
Sbjct: 157 IHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSX--ICSRYYRAPE 211
Query: 489 YA-SSGKLTEKSDVFSFGVMLLELITGR 515
+ T D++S G ++ EL+ G+
Sbjct: 212 LIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 28/241 (11%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLV 375
+ + ++G G FG V++ L + G+ VA+K + Q +R + E++I+ ++ H ++V
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 95
Query: 376 SLVGYCIAGGQRM------LVYEFVSNKTLEYHLH----GENRPVMDFATRVRIALGSA- 424
L + + G++ LV ++V H + PV+ V++ +
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI----YVKLYMYQLF 151
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAM-VADFGLAKLSNDNHTHVSTRVMGTFG 483
+ LAY+H I HRDIK N+L+D + + + DFG AK +VS + +
Sbjct: 152 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRY 206
Query: 484 YLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDG 542
Y APE + T DV+S G +L EL+ G+ D LVE + +LG +
Sbjct: 207 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLGTPTREQ 265
Query: 543 I 543
I
Sbjct: 266 I 266
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 29/209 (13%)
Query: 323 LLGQGGFGYVHKGVLP----NGKEVAVKSL---KTGSGQGEREFSAEVEIISRVHHRHLV 375
+LG+G FG V +L G+E AVK + + + EV+++ ++ H ++
Sbjct: 33 VLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIX 89
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR-PVMDFATRVRIALGSAKGLAYLHEDC 434
L + G LV E + L + R +D A +R L G+ Y H++
Sbjct: 90 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS---GITYXHKN- 145
Query: 435 HPRIIHRDIKAANILIDD---NFEAMVADFGLAKLSNDNHTHVSTRV---MGTFGYLAPE 488
+I+HRD+K N+L++ + + DFGL+ H S + +GT Y+APE
Sbjct: 146 --KIVHRDLKPENLLLESKSKDANIRIIDFGLS-----THFEASKKXKDKIGTAYYIAPE 198
Query: 489 YASSGKLTEKSDVFSFGVMLLELITGRRP 517
G EK DV+S GV+L L++G P
Sbjct: 199 -VLHGTYDEKCDVWSTGVILYILLSGCPP 226
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 316 GGFAKSNLLGQGGFGYVHKG-VLPNGKEVAVKSLKT---GSGQGEREFSAEVEIISRVHH 371
F +G+G F V++ L +G VA+K ++ + + E++++ +++H
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEY---HLHGENRPVMDFAT-RVRIALGSAKGL 427
+++ I + +V E L H + R + + + + L SA L
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA--L 149
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAP 487
++H R++HRDIK AN+ I + D GL + + T + V GT Y++P
Sbjct: 150 EHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSP 205
Query: 488 EYASSGKLTEKSDVFSFGVMLLELITGRRP 517
E KSD++S G +L E+ + P
Sbjct: 206 ERIHENGYNFKSDIWSLGCLLYEMAALQSP 235
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 28/241 (11%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLV 375
+ + ++G G FG V++ L + G+ VA+K + Q +R + E++I+ ++ H ++V
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 84
Query: 376 SLVGYCIAGGQRM------LVYEFVSNKTLEYHLH----GENRPVMDFATRVRIALGSA- 424
L + + G++ LV ++V H + PV+ V++ +
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI----YVKLYMYQLF 140
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAM-VADFGLAKLSNDNHTHVSTRVMGTFG 483
+ LAY+H I HRDIK N+L+D + + + DFG AK +VS + +
Sbjct: 141 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRY 195
Query: 484 YLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDG 542
Y APE + T DV+S G +L EL+ G+ D LVE + +LG +
Sbjct: 196 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLGTPTREQ 254
Query: 543 I 543
I
Sbjct: 255 I 255
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 51/238 (21%)
Query: 318 FAKSNLLGQGGFGYVHKGVLPNGKEV----------AVKSLKTGSGQGEREF--SAEVEI 365
F ++G+G FG V + N + + +K +T + ER+ + + +
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 135
Query: 366 ISRVHH-----RHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFAT----R 416
I+ +H+ HL ++ Y + G L+ +F E++ D A
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKF------------EDKLPEDMARFYIGE 183
Query: 417 VRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVST 476
+ +A+ S L Y +HRDIK N+L+D N +ADFG ND+ T S+
Sbjct: 184 MVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSS 234
Query: 477 RVMGTFGYLAPEYASS-----GKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVE 529
+GT Y++PE + GK + D +S GV + E++ G P +SLVE
Sbjct: 235 VAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP----FYAESLVE 288
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 35/223 (15%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRHL 374
+ K +GQG FG V K G++VA+K + + + +A E++I+ + H ++
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 375 VSLVGYCI--------AGGQRMLVYEFVSNKTLEYHLHGENRPVM---DFATRVRIALGS 423
V+L+ C G LV++F E+ L G V+ + R+
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFC-----EHDLAGLLSNVLVKFTLSEIKRVMQML 134
Query: 424 AKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMG 480
GL Y+H + +I+HRD+KAAN+LI + +ADFGLA+ L+ ++ + +
Sbjct: 135 LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 481 TFGYLAPEYASSGKLTEKS-----DVFSFGVMLLELITGRRPV 518
T Y PE L E+ D++ G ++ E+ T R P+
Sbjct: 192 TLWYRPPELL----LGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 103/246 (41%), Gaps = 25/246 (10%)
Query: 298 ALGFNKSTFTYDELAAATGGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGE 356
A G ++S F + +L +GGF +V++ + +G+E A+K L + +
Sbjct: 10 ASGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKN 69
Query: 357 REFSAEVEIISRVH-HRHLVSLVGYCIAGGQR--------MLVYEFVSNKTLEYHLHGEN 407
R EV + ++ H ++V G + +L+ E + +E+ E+
Sbjct: 70 RAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMES 129
Query: 408 RPVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLA--- 464
R + T ++I + + + ++H P IIHRD+K N+L+ + + DFG A
Sbjct: 130 RGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTI 188
Query: 465 ------KLSNDNHTHVSTRVM--GTFGYLAPEYA---SSGKLTEKSDVFSFGVMLLELIT 513
S V + T Y PE S+ + EK D+++ G +L L
Sbjct: 189 SHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCF 248
Query: 514 GRRPVD 519
+ P +
Sbjct: 249 RQHPFE 254
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 28/241 (11%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLV 375
+ + ++G G FG V++ L + G+ VA+K + Q +R + E++I+ ++ H ++V
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 89
Query: 376 SLVGYCIAGGQRM------LVYEFVSNKTLEYHLH----GENRPVMDFATRVRIALGSA- 424
L + + G++ LV ++V H + PV+ V++ +
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI----YVKLYMYQLF 145
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAM-VADFGLAKLSNDNHTHVSTRVMGTFG 483
+ LAY+H I HRDIK N+L+D + + + DFG AK +VS + +
Sbjct: 146 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRY 200
Query: 484 YLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDG 542
Y APE + T DV+S G +L EL+ G+ D LVE + +LG +
Sbjct: 201 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLGTPTREQ 259
Query: 543 I 543
I
Sbjct: 260 I 260
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 51/238 (21%)
Query: 318 FAKSNLLGQGGFGYVHKGVLPNGKEV----------AVKSLKTGSGQGEREF--SAEVEI 365
F ++G+G FG V + N + + +K +T + ER+ + + +
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 151
Query: 366 ISRVHH-----RHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFAT----R 416
I+ +H+ HL ++ Y + G L+ +F E++ D A
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKF------------EDKLPEDMARFYIGE 199
Query: 417 VRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVST 476
+ +A+ S L Y +HRDIK N+L+D N +ADFG ND+ T S+
Sbjct: 200 MVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSS 250
Query: 477 RVMGTFGYLAPEYASS-----GKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVE 529
+GT Y++PE + GK + D +S GV + E++ G P +SLVE
Sbjct: 251 VAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP----FYAESLVE 304
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 28/241 (11%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLV 375
+ + ++G G FG V++ L + G+ VA+K + Q +R + E++I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 76
Query: 376 SLVGYCIAGGQRM------LVYEFVSNKTLEYHLH----GENRPVMDFATRVRIALGSA- 424
L + + G++ LV ++V H + PV+ V++ +
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVI----YVKLYMYQLF 132
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAM-VADFGLAKLSNDNHTHVSTRVMGTFG 483
+ LAY+H I HRDIK N+L+D + + + DFG AK +VS + +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRY 187
Query: 484 YLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDG 542
Y APE + T DV+S G +L EL+ G+ D LVE + +LG +
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLGTPTREQ 246
Query: 543 I 543
I
Sbjct: 247 I 247
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 28/241 (11%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLV 375
+ + ++G G FG V++ L + G+ VA+K + Q +R + E++I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 76
Query: 376 SLVGYCIAGGQRM------LVYEFVSNKTLEYHLH----GENRPVMDFATRVRIALGSA- 424
L + + G++ LV ++V H + PV+ V++ +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI----YVKLYMYQLF 132
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAM-VADFGLAKLSNDNHTHVSTRVMGTFG 483
+ LAY+H I HRDIK N+L+D + + + DFG AK +VS + +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRY 187
Query: 484 YLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDG 542
Y APE + T DV+S G +L EL+ G+ D LVE + +LG +
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLGTPTREQ 246
Query: 543 I 543
I
Sbjct: 247 I 247
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 28/241 (11%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLV 375
+ + ++G G FG V++ L + G+ VA+K + Q +R + E++I+ ++ H ++V
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 80
Query: 376 SLVGYCIAGGQRM------LVYEFVSNKTLEYHLH----GENRPVMDFATRVRIALGSA- 424
L + + G++ LV ++V H + PV+ V++ +
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI----YVKLYMYQLF 136
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAM-VADFGLAKLSNDNHTHVSTRVMGTFG 483
+ LAY+H I HRDIK N+L+D + + + DFG AK +VS + +
Sbjct: 137 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRY 191
Query: 484 YLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDG 542
Y APE + T DV+S G +L EL+ G+ D LVE + +LG +
Sbjct: 192 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLGTPTREQ 250
Query: 543 I 543
I
Sbjct: 251 I 251
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 107/231 (46%), Gaps = 45/231 (19%)
Query: 315 TGGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHH 371
+ K +GQG FG V K G++VA+K + + + +A E++I+ + H
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 372 RHLVSLVGYCI--------AGGQRMLVYEF--------VSNKTLEYHLHGENRPVMDFAT 415
++V+L+ C G LV++F +SN +++ L E + VM
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL-SEIKRVMQMLL 134
Query: 416 RVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHT 472
GL Y+H + +I+HRD+KAAN+LI + +ADFGLA+ L+ ++
Sbjct: 135 ---------NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 182
Query: 473 HVSTRVMGTFGYLAPEYASSGKLTEKS-----DVFSFGVMLLELITGRRPV 518
+ + T Y PE L E+ D++ G ++ E+ T R P+
Sbjct: 183 NRYXNRVVTLWYRPPELL----LGERDYGPPIDLWGAGCIMAEMWT-RSPI 228
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 28/241 (11%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLV 375
+ + ++G G FG V++ L + G+ VA+K + Q +R + E++I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 76
Query: 376 SLVGYCIAGGQRM------LVYEFVSNKTLEYHLH----GENRPVMDFATRVRIALGSA- 424
L + + G++ LV ++V H + PV+ V++ +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI----YVKLYMYQLF 132
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAM-VADFGLAKLSNDNHTHVSTRVMGTFG 483
+ LAY+H I HRDIK N+L+D + + + DFG AK +VS + +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRY 187
Query: 484 YLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDG 542
Y APE + T DV+S G +L EL+ G+ D LVE + +LG +
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLGTPTREQ 246
Query: 543 I 543
I
Sbjct: 247 I 247
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 9/213 (4%)
Query: 318 FAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSA-EVEIISRVHHRHLV 375
+ K + LG+G + V+KG VA+K ++ +G + EV ++ + H ++V
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIV 63
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
+L LV+E++ +Y N +++ +GLAY H
Sbjct: 64 TLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGN--IINMHNVKLFLFQLLRGLAYCHRQ-- 119
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE-YASSGK 494
+++HRD+K N+LI++ E +ADFGLA+ + V+ T Y P+ S
Sbjct: 120 -KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPDILLGSTD 177
Query: 495 LTEKSDVFSFGVMLLELITGRRPVDMTMMEDSL 527
+ + D++ G + E+ TGR + +E+ L
Sbjct: 178 YSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQL 210
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 28/241 (11%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLV 375
+ + ++G G FG V++ L + G+ VA+K + Q +R + E++I+ ++ H ++V
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 77
Query: 376 SLVGYCIAGGQRM------LVYEFVSNKTLEYHLH----GENRPVMDFATRVRIALGSA- 424
L + + G++ LV ++V H + PV+ V++ +
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI----YVKLYMYQLF 133
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAM-VADFGLAKLSNDNHTHVSTRVMGTFG 483
+ LAY+H I HRDIK N+L+D + + + DFG AK +VS + +
Sbjct: 134 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRY 188
Query: 484 YLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDG 542
Y APE + T DV+S G +L EL+ G+ D LVE + +LG +
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLGTPTREQ 247
Query: 543 I 543
I
Sbjct: 248 I 248
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 22/194 (11%)
Query: 358 EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTL----EYHLHGENR----- 408
+F E++II+ + + + ++ G + ++YE++ N ++ EY +
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 409 PVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSN 468
P+ ++ L S +Y+H + I HRD+K +NIL+D N ++DFG ++
Sbjct: 149 PIQVIKCIIKSVLNS---FSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYMV 203
Query: 469 DNHTHVSTRVMGTFGYLAPEYAS--SGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDS 526
D S GT+ ++ PE+ S S K D++S G+ L + P + + S
Sbjct: 204 DKKIKGSR---GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKI---S 257
Query: 527 LVEWARPLLGAALE 540
LVE + +E
Sbjct: 258 LVELFNNIRTKNIE 271
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 18/208 (8%)
Query: 318 FAKSNLLGQGGFGYVHKGVL----PNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVH 370
F LLG+G FG K +L G+ A+K L+ + E + E ++
Sbjct: 7 FDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 371 HRHLVSLVGYCIAGGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
H L +L Y R+ V E+ + L +HL E + A + SA L Y
Sbjct: 64 HPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA--LEY 120
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
LH +++RDIK N+++D + + DFGL K + + T GT YLAPE
Sbjct: 121 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEV 176
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
D + GV++ E++ GR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMGT 481
+GL Y+H ++IHRD+K +N+L+++N E + DFG+A+ S H + T + T
Sbjct: 170 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 482 FGYLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRR 516
Y APE S + T+ D++S G + E++ R+
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 18/208 (8%)
Query: 318 FAKSNLLGQGGFGYVHKGVL----PNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVH 370
F LLG+G FG K +L G+ A+K L+ + E + E ++
Sbjct: 7 FDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 371 HRHLVSLVGYCIAGGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
H L +L Y R+ V E+ + L +HL E + A + SA L Y
Sbjct: 64 HPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA--LEY 120
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
LH +++RDIK N+++D + + DFGL K + + T GT YLAPE
Sbjct: 121 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEV 176
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
D + GV++ E++ GR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 18/208 (8%)
Query: 318 FAKSNLLGQGGFGYVHKGVL----PNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVH 370
F LLG+G FG K +L G+ A+K L+ + E + E ++
Sbjct: 10 FDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 66
Query: 371 HRHLVSLVGYCIAGGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
H L +L Y R+ V E+ + L +HL E + A + SA L Y
Sbjct: 67 HPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA--LEY 123
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
LH +++RDIK N+++D + + DFGL K + + T GT YLAPE
Sbjct: 124 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEV 179
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
D + GV++ E++ GR P
Sbjct: 180 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 28/241 (11%)
Query: 317 GFAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLV 375
+ + ++G G FG V++ L + G+ VA+K + Q +R + E++I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 76
Query: 376 SLVGYCIAGGQRM------LVYEFVSNKTLEYHLH----GENRPVMDFATRVRIALGSA- 424
L + + G++ LV ++V H + PV+ V++ +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI----YVKLYMYQLF 132
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAM-VADFGLAKLSNDNHTHVSTRVMGTFG 483
+ LAY+H I HRDIK N+L+D + + + DFG AK +VS + +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRY 187
Query: 484 YLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWARPLLGAALEDG 542
Y APE + T DV+S G +L EL+ G+ D LVE + +LG +
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLGTPTREQ 246
Query: 543 I 543
I
Sbjct: 247 I 247
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 17/208 (8%)
Query: 318 FAKSNLLGQGGFGYVHKGVL----PNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVH 370
F LLG+G FG V +L G+ A+K LK + E + E ++
Sbjct: 12 FEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 68
Query: 371 HRHLVSLVGYCIAGGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
H L +L Y R+ V E+ + L +HL E D A + SA L Y
Sbjct: 69 HPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA--LDY 125
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
LH + +++RD+K N+++D + + DFGL K + + GT YLAPE
Sbjct: 126 LHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPEYLAPEV 182
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
D + GV++ E++ GR P
Sbjct: 183 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 155 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 206
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 148 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 199
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 148 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 199
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 148 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 199
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 17/208 (8%)
Query: 318 FAKSNLLGQGGFGYVHKGVL----PNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVH 370
F LLG+G FG V +L G+ A+K LK + E + E ++
Sbjct: 10 FEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 66
Query: 371 HRHLVSLVGYCIAGGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
H L +L Y R+ V E+ + L +HL E D A + SA L Y
Sbjct: 67 HPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA--LDY 123
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
LH + +++RD+K N+++D + + DFGL K + + GT YLAPE
Sbjct: 124 LHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPEYLAPEV 180
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
D + GV++ E++ GR P
Sbjct: 181 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 147 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 198
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 138 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 156 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 207
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 17/208 (8%)
Query: 318 FAKSNLLGQGGFGYVHKGVL----PNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVH 370
F LLG+G FG V +L G+ A+K LK + E + E ++
Sbjct: 11 FEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 67
Query: 371 HRHLVSLVGYCIAGGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
H L +L Y R+ V E+ + L +HL E D A + SA L Y
Sbjct: 68 HPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA--LDY 124
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
LH + +++RD+K N+++D + + DFGL K + + GT YLAPE
Sbjct: 125 LHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPEYLAPEV 181
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
D + GV++ E++ GR P
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 194
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 155 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 206
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 133 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 184
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 135 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 186
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 187 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 146 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 197
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 156 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 207
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 147 RGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 198
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 138 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 132 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 183
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 159 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 210
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 138 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 132 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 183
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 134 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 185
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 132 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 183
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 133 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 184
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 324 LGQGGFGYVHKGVLP-NGKEVAVKSLK------TGSGQGEREFSAEVEIISRVHHRHLVS 376
LG G F V K GKE A K +K + G E EV I+ + H ++++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
L +L+ E VS L L + D AT+ + G+ YLH
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI--LDGVHYLH---SK 134
Query: 437 RIIHRDIKAANILIDD----NFEAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYAS 491
RI H D+K NI++ D N + DFG+A K+ N + GT ++APE +
Sbjct: 135 RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK---NIFGTPEFVAPEIVN 191
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRP 517
L ++D++S GV+ L++G P
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMGT 481
+GL Y+H ++IHRD+K +N+L+++N E + DFG+A+ S H + T + T
Sbjct: 169 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 482 FGYLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRR 516
Y APE S + T+ D++S G + E++ R+
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 324 LGQGGFGYVHKGVLP-NGKEVAVKSLK------TGSGQGEREFSAEVEIISRVHHRHLVS 376
LG G F V K GKE A K +K + G E EV I+ + H ++++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
L +L+ E VS L L + D AT+ + G+ YLH
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI--LDGVHYLH---SK 127
Query: 437 RIIHRDIKAANILIDD----NFEAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYAS 491
RI H D+K NI++ D N + DFG+A K+ N + GT ++APE +
Sbjct: 128 RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK---NIFGTPEFVAPEIVN 184
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRP 517
L ++D++S GV+ L++G P
Sbjct: 185 YEPLGLEADMWSIGVITYILLSGASP 210
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 324 LGQGGFGYVHKGVLP-NGKEVAVKSLK------TGSGQGEREFSAEVEIISRVHHRHLVS 376
LG G F V K GKE A K +K + G E EV I+ + H ++++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
L +L+ E VS L L + D AT+ + G+ YLH
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI--LDGVHYLH---SK 148
Query: 437 RIIHRDIKAANILIDD----NFEAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYAS 491
RI H D+K NI++ D N + DFG+A K+ N + GT ++APE +
Sbjct: 149 RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK---NIFGTPEFVAPEIVN 205
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRP 517
L ++D++S GV+ L++G P
Sbjct: 206 YEPLGLEADMWSIGVITYILLSGASP 231
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 138 RGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEVEIISRVHHRHLVSLVGY 380
LG+G F V + V G E A K + T S + ++ E I ++ H ++V L
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 381 CIAGGQRMLVYEFVSNKTL-EYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
LV++ V+ L E + E D + ++ L S +AY H + I+
Sbjct: 73 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES---IAYCHSN---GIV 126
Query: 440 HRDIKAANILIDDNFE---AMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLT 496
HR++K N+L+ + +ADFGLA ND+ GT GYL+PE +
Sbjct: 127 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG--FAGTPGYLSPEVLKKDPYS 184
Query: 497 EKSDVFSFGVMLLELITGRRP 517
+ D+++ GV+L L+ G P
Sbjct: 185 KPVDIWACGVILYILLVGYPP 205
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEVEIISRVHHRHLVSLVGY 380
LG+G F V + V G E A K + T S + ++ E I ++ H ++V L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 381 CIAGGQRMLVYEFVSNKTL-EYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
LV++ V+ L E + E D + ++ L S +AY H + I+
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES---IAYCHSN---GIV 127
Query: 440 HRDIKAANILIDDNFE---AMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLT 496
HR++K N+L+ + +ADFGLA ND+ GT GYL+PE +
Sbjct: 128 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG--FAGTPGYLSPEVLKKDPYS 185
Query: 497 EKSDVFSFGVMLLELITGRRP 517
+ D+++ GV+L L+ G P
Sbjct: 186 KPVDIWACGVILYILLVGYPP 206
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEVEIISRVHHRHLVSLVGY 380
LG+G F V + V G E A K + T S + ++ E I ++ H ++V L
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 381 CIAGGQRMLVYEFVSNKTL-EYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
LV++ V+ L E + E D + ++ L S +AY H + I+
Sbjct: 97 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES---IAYCHSN---GIV 150
Query: 440 HRDIKAANILIDDNFE---AMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLT 496
HR++K N+L+ + +ADFGLA ND+ GT GYL+PE +
Sbjct: 151 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG--FAGTPGYLSPEVLKKDPYS 208
Query: 497 EKSDVFSFGVMLLELITGRRP 517
+ D+++ GV+L L+ G P
Sbjct: 209 KPVDIWACGVILYILLVGYPP 229
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEVEIISRVHHRHLVSLVGY 380
LG+G F V + V G E A K + T S + ++ E I ++ H ++V L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 381 CIAGGQRMLVYEFVSNKTL-EYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
LV++ V+ L E + E D + ++ L S +AY H + I+
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES---IAYCHSN---GIV 127
Query: 440 HRDIKAANILIDDNFE---AMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLT 496
HR++K N+L+ + +ADFGLA ND+ GT GYL+PE +
Sbjct: 128 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG--FAGTPGYLSPEVLKKDPYS 185
Query: 497 EKSDVFSFGVMLLELITGRRP 517
+ D+++ GV+L L+ G P
Sbjct: 186 KPVDIWACGVILYILLVGYPP 206
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 35/223 (15%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSA--EVEIISRVHHRHL 374
+ K +GQG FG V K G++VA+K + + + +A E++I+ + H ++
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 375 VSLVGYCI--------AGGQRMLVYEFVSNKTLEYHLHGENRPVM---DFATRVRIALGS 423
V+L+ C LV++F E+ L G V+ + R+
Sbjct: 80 VNLIEICRTKASPYNRCKASIYLVFDFC-----EHDLAGLLSNVLVKFTLSEIKRVMQML 134
Query: 424 AKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK---LSNDNHTHVSTRVMG 480
GL Y+H + +I+HRD+KAAN+LI + +ADFGLA+ L+ ++ + +
Sbjct: 135 LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 481 TFGYLAPEYASSGKLTEKS-----DVFSFGVMLLELITGRRPV 518
T Y PE L E+ D++ G ++ E+ T R P+
Sbjct: 192 TLWYRPPELL----LGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ + D T +V+TR
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----W 194
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 18/203 (8%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEVEIISRVHHRHLVSLVGY 380
LG+G F V + + +P G+E A K + T S + ++ E I + H ++V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 381 CIAGGQRMLVYEFVSNKTL-EYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPR-I 438
G LV++ V+ L E + E D + ++ L S CH I
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN-------HCHLNGI 124
Query: 439 IHRDIKAANILIDDNFE---AMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYASSGK 494
+HRD+K N+L+ + +ADFGLA ++ D GT GYL+PE
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLSPEVLRKDP 182
Query: 495 LTEKSDVFSFGVMLLELITGRRP 517
+ D+++ GV+L L+ G P
Sbjct: 183 YGKPVDMWACGVILYILLVGYPP 205
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ + D T +V+TR
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----W 194
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ + D T +V+TR
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----W 194
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 18/203 (8%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEVEIISRVHHRHLVSLVGY 380
LG+G F V + + +P G+E A K + T S + ++ E I + H ++V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 381 CIAGGQRMLVYEFVSNKTL-EYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPR-I 438
G LV++ V+ L E + E D + ++ L S CH I
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN-------HCHLNGI 124
Query: 439 IHRDIKAANILIDDNFE---AMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYASSGK 494
+HRD+K N+L+ + +ADFGLA ++ D GT GYL+PE
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLSPEVLRKDP 182
Query: 495 LTEKSDVFSFGVMLLELITGRRP 517
+ D+++ GV+L L+ G P
Sbjct: 183 YGKPVDMWACGVILYILLVGYPP 205
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T +V+TR
Sbjct: 165 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 216
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + D++S G ++ EL+TGR
Sbjct: 217 YRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D T V+TR
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR-----W 187
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 28/169 (16%)
Query: 362 EVEIISRVHHRHLVSLVGYCIAGGQRML--VYEFVSNKTLEYHLHGENRPVMDFATRVRI 419
E+ I+ ++ H ++V LV + L V+E V+ PVM+ T +
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQG-----------PVMEVPTLKPL 134
Query: 420 ALGSA--------KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNH 471
+ A KG+ YLH + +IIHRDIK +N+L+ ++ +ADFG++ +
Sbjct: 135 SEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD 191
Query: 472 THVSTRVMGTFGYLAPEYASSGKLT---EKSDVFSFGVMLLELITGRRP 517
+S V GT ++APE S + + DV++ GV L + G+ P
Sbjct: 192 ALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + D+GLA+ ++D T +V+TR
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----W 187
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 318 FAKSNLLGQGGFGYVHKGVL----PNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVH 370
F LLG+G FG K +L G+ A+K L+ + E + E ++
Sbjct: 12 FDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 68
Query: 371 HRHLVSLVGYCIAGGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
H L +L Y R+ V E+ + L +HL E + A + SA L Y
Sbjct: 69 HPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA--LEY 125
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
LH +++RDIK N+++D + + DFGL K + + GT YLAPE
Sbjct: 126 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPEYLAPEV 181
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
D + GV++ E++ GR P
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 438 IIHRDIKAANILI---DDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGK 494
++HRD+K N+L +DN E + DFG A+L ++ + T T Y APE +
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQNG 185
Query: 495 LTEKSDVFSFGVMLLELITGRRPV---DMTMMEDSLVEWARPL 534
E D++S GV+L +++G+ P D ++ S VE + +
Sbjct: 186 YDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKI 228
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 313 AATGGFAKSNLLGQGGFGYVHKGVLP-NGKEVAVKSLKTGSGQGEREFSAEVEIISRVHH 371
A + F + LG+G V++ K A+K LK + + E+ ++ R+ H
Sbjct: 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSH 107
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVS-----NKTLEYHLHGENRPVMDFATRVRIALGSAKG 426
+++ L + LV E V+ ++ +E + E D A V+ L +
Sbjct: 108 PNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSER----DAADAVKQIL---EA 160
Query: 427 LAYLHEDCHPRIIHRDIKAANILIDD---NFEAMVADFGLAKLSNDNHTHVSTRVMGTFG 483
+AYLHE+ I+HRD+K N+L + +ADFGL+K+ H + V GT G
Sbjct: 161 VAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE--HQVLMKTVCGTPG 215
Query: 484 YLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
Y APE + D++S G++ L+ G P
Sbjct: 216 YCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 318 FAKSNLLGQGGFGYVHKGVL----PNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVH 370
F LLG+G FG K +L G+ A+K L+ + E + E ++
Sbjct: 7 FDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 371 HRHLVSLVGYCIAGGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
H L +L Y R+ V E+ + L +HL E + A + SA L Y
Sbjct: 64 HPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA--LEY 120
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
LH +++RDIK N+++D + + DFGL K + + GT YLAPE
Sbjct: 121 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPEYLAPEV 176
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
D + GV++ E++ GR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 318 FAKSNLLGQGGFGYVHKGVL----PNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVH 370
F LLG+G FG K +L G+ A+K L+ + E + E ++
Sbjct: 7 FDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 371 HRHLVSLVGYCIAGGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
H L +L Y R+ V E+ + L +HL E + A + SA L Y
Sbjct: 64 HPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA--LEY 120
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
LH +++RDIK N+++D + + DFGL K + + GT YLAPE
Sbjct: 121 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPEYLAPEV 176
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
D + GV++ E++ GR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 99/208 (47%), Gaps = 20/208 (9%)
Query: 324 LGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCI 382
LG GG G V V + K VA+K + Q + E++II R+ H ++V +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 383 AGGQRM---------LVYEFVSNKTLEYHLHG--ENRPVMDFATRVRIALGSAKGLAYLH 431
G ++ L ++ + +E L E P+++ R+ +GL Y+H
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL-FMYQLLRGLKYIH 137
Query: 432 EDCHPRIIHRDIKAANILID-DNFEAMVADFGLAKLSNDNHTHVS--TRVMGTFGYLAPE 488
++HRD+K AN+ I+ ++ + DFGLA++ + +++H + + T Y +P
Sbjct: 138 S---ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPR 194
Query: 489 -YASSGKLTEKSDVFSFGVMLLELITGR 515
S T+ D+++ G + E++TG+
Sbjct: 195 LLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 95/223 (42%), Gaps = 24/223 (10%)
Query: 311 LAAATGGFAKS----NLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGER-------- 357
LAA G +++ + LG G FG+V V KEV VK +K +
Sbjct: 15 LAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLG 74
Query: 358 EFSAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMD--FAT 415
+ + E+ I+SRV H +++ ++ G LV E L+ + P +D A+
Sbjct: 75 KVTLEIAILSRVEHANIIKVLDIFENQGFFQLVME-KHGSGLDLFAFIDRHPRLDEPLAS 133
Query: 416 RVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS 475
+ L SA G L + IIHRDIK NI+I ++F + DFG A +
Sbjct: 134 YIFRQLVSAVGYLRLKD-----IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT 188
Query: 476 TRVMGTFGYLAPEYASSGKLT-EKSDVFSFGVMLLELITGRRP 517
GT Y APE + +++S GV L L+ P
Sbjct: 189 --FCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENP 229
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGL + ++D T +V+TR
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-----W 187
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 318 FAKSNLLGQGGFGYVHKGVL----PNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVH 370
F LLG+G FG K +L G+ A+K L+ + E + E ++
Sbjct: 7 FDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 371 HRHLVSLVGYCIAGGQRM-LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
H L +L Y R+ V E+ + L +HL E + A + SA L Y
Sbjct: 64 HPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA--LEY 120
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
LH +++RDIK N+++D + + DFGL K + + GT YLAPE
Sbjct: 121 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPEYLAPEV 176
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
D + GV++ E++ GR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 6/152 (3%)
Query: 370 HHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
+H LV L + V E+V+ L +H+ + + + A + A L Y
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNY 168
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
LHE II+RD+K N+L+D + D+G+ K ST GT Y+APE
Sbjct: 169 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST-FCGTPNYIAPEI 224
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRPVDMT 521
D ++ GV++ E++ GR P D+
Sbjct: 225 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 256
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D +V+TR
Sbjct: 159 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----W 210
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 28/209 (13%)
Query: 324 LGQGGFGYVHKGVLPN-GKEVAVKSLKTGS-GQGEREFSAEVEIISRVHHRHLVSLVGYC 381
LG+G F V + + + G+E A K LK GQ R AE+ +H ++ L C
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCR---AEI-----LHEIAVLELAKSC 88
Query: 382 IAGGQRMLVYEFVSN--KTLEYHLHGE--NRPVMDFATRV------RIALGSAKGLAYLH 431
VYE S LEY GE + + + A V R+ +G+ YLH
Sbjct: 89 PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH 148
Query: 432 EDCHPRIIHRDIKAANILIDDNF---EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
++ I+H D+K NIL+ + + + DFG+++ H +MGT YLAPE
Sbjct: 149 QN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR--KIGHACELREIMGTPEYLAPE 203
Query: 489 YASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ +T +D+++ G++ L+T P
Sbjct: 204 ILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 324 LGQGGFGYVHKGVLPNGK----EVAVKSLK--TGSGQGEREFSAEVEIISRVHHRHLVSL 377
LG G +G V +L K E A+K ++ + S + EV ++ + H +++ L
Sbjct: 45 LGSGAYGEV---LLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKL 101
Query: 378 VGYCIAGGQRMLVYE-FVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
+ LV E + + + +H +D A ++ L G+ YLH+
Sbjct: 102 YDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLS---GVTYLHK---H 155
Query: 437 RIIHRDIKAANILIDDNFE---AMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSG 493
I+HRD+K N+L++ + + DFGL+ + +N + R +GT Y+APE
Sbjct: 156 NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF-ENQKKMKER-LGTAYYIAPEVLRK- 212
Query: 494 KLTEKSDVFSFGVMLLELITGRRP 517
K EK DV+S GV+L L+ G P
Sbjct: 213 KYDEKCDVWSIGVILFILLAGYPP 236
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 16/202 (7%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEVEIISRVHHRHLVSLVGY 380
LG+G F V + V + G+E A K + T S + ++ E I + H ++V L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 381 CIAGGQRMLVYEFVSNKTL-EYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPR-I 438
G L+++ V+ L E + E D + ++ L A LH CH +
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE-----AVLH--CHQMGV 142
Query: 439 IHRDIKAANILIDDNFE---AMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKL 495
+HRD+K N+L+ + +ADFGLA + + GT GYL+PE
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 201
Query: 496 TEKSDVFSFGVMLLELITGRRP 517
+ D+++ GV+L L+ G P
Sbjct: 202 GKPVDLWACGVILYILLVGYPP 223
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 6/152 (3%)
Query: 370 HHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
+H LV L + V E+V+ L +H+ + + + A + A L Y
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNY 125
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
LHE II+RD+K N+L+D + D+G+ K ++ GT Y+APE
Sbjct: 126 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEI 181
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRPVDMT 521
D ++ GV++ E++ GR P D+
Sbjct: 182 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 213
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%)
Query: 440 HRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKS 499
HRD+K NIL+ + A + DFG+A + D +GT Y APE S T ++
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 500 DVFSFGVMLLELITGRRP 517
D+++ +L E +TG P
Sbjct: 217 DIYALTCVLYECLTGSPP 234
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 6/152 (3%)
Query: 370 HHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
+H LV L + V E+V+ L +H+ + + + A + A L Y
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNY 121
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
LHE II+RD+K N+L+D + D+G+ K ++ GT Y+APE
Sbjct: 122 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEI 177
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRPVDMT 521
D ++ GV++ E++ GR P D+
Sbjct: 178 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 209
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 6/152 (3%)
Query: 370 HHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
+H LV L + V E+V+ L +H+ + + + A + A L Y
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNY 136
Query: 430 LHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
LHE II+RD+K N+L+D + D+G+ K ++ GT Y+APE
Sbjct: 137 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEI 192
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRPVDMT 521
D ++ GV++ E++ GR P D+
Sbjct: 193 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 224
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D V+TR
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----W 187
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D V+TR
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----W 187
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DF LA+ ++D T +V+TR
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-----W 187
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D V+TR
Sbjct: 156 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR-----W 207
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 18/203 (8%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEVEIISRVHHRHLVSLVGY 380
+G+G F V + V L G E A K + T S + ++ E I + H ++V L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 381 CIAGGQRMLVYEFVSNKTL-EYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPR-I 438
G LV++ V+ L E + E D + ++ L A LH CH +
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE-----AVLH--CHQMGV 124
Query: 439 IHRDIKAANILIDDNFE---AMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYASSGK 494
+HRD+K N+L+ + +ADFGLA ++ D GT GYL+PE
Sbjct: 125 VHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLSPEVLRKEA 182
Query: 495 LTEKSDVFSFGVMLLELITGRRP 517
+ D+++ GV+L L+ G P
Sbjct: 183 YGKPVDIWACGVILYILLVGYPP 205
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ ++D V+TR
Sbjct: 132 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----W 183
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + FGLA+ ++D T +V+TR
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----W 187
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 20/218 (9%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQG-EREFSAEVEIISRVHHRHLVSLVGYCI 382
+G+G +G+V+K +GK+ +LK G G E+ ++ + H +++SL +
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 383 AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK--------GLAYLHEDC 434
+ R + F + +H+ +R V++ G K G+ YLH +
Sbjct: 89 SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW 148
Query: 435 HPRIIHRDIKAANILI----DDNFEAMVADFGLAKLSNDNHTHVSTR--VMGTFGYLAPE 488
++HRD+K ANIL+ + +AD G A+L N ++ V+ TF Y APE
Sbjct: 149 ---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPE 205
Query: 489 YASSGK-LTEKSDVFSFGVMLLELITGRRPVDMTMMED 525
+ T+ D+++ G + EL+T P+ ED
Sbjct: 206 LLLGARHYTKAIDIWAIGCIFAELLTS-EPIFHCRQED 242
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + D GLA+ ++D T +V+TR
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-----W 187
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + D GLA+ ++D T +V+TR
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-----W 187
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 24/218 (11%)
Query: 317 GFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLK-TGSG-------QGEREFS-AEVEII 366
+ +LG+G V + + P KE AVK + TG G Q RE + EV+I+
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 367 SRVH-HRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK 425
+V H +++ L LV++ + L +L E + + TR +I +
Sbjct: 78 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETR-KIMRALLE 135
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYL 485
+ LH+ I+HRD+K NIL+DD+ + DFG + + S V GT YL
Sbjct: 136 VICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS--VCGTPSYL 190
Query: 486 APEYASSGK------LTEKSDVFSFGVMLLELITGRRP 517
APE ++ D++S GV++ L+ G P
Sbjct: 191 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ +++ T +V+TR
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----W 185
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+ G+
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + D GLA+ ++D T +V+TR
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----W 187
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+TGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 320 KSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVH-HRHLVSL 377
+ ++LG+G V + L +E AVK ++ G EVE++ + HR+++ L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 378 VGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPR 437
+ + + LV+E + ++ H+H + R + V + A L +LH +
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIH-KRRHFNELEASV-VVQDVASALDFLH---NKG 131
Query: 438 IIHRDIKAANILIDDNFE---AMVADFGLA---KLSNDNHTHVSTRVM---GTFGYLAPE 488
I HRD+K NIL + + + DFGL KL+ D + ++ G+ Y+APE
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 489 ----YASSGKLTEK-SDVFSFGVMLLELITGRRP 517
++ + +K D++S GV+L L++G P
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 29/206 (14%)
Query: 324 LGQGGFGYVHKGVL-PNGKEVAVKSL--KTGSGQGEREFSAEVEIISRVHHRHLVSLVGY 380
+G G +G V V G +VA+K L S + E+ ++ + H +++ L+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 381 CIAGGQR------MLVYEFVSN---KTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLH 431
LV F+ K +++ GE+R + F + KGL Y+H
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDR--IQF-----LVYQMLKGLRYIH 145
Query: 432 EDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFGYLAPEYA 490
IIHRD+K N+ ++++ E + DFGLA+ ++ V TR Y APE
Sbjct: 146 AAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR-----WYRAPEVI 197
Query: 491 SSG-KLTEKSDVFSFGVMLLELITGR 515
+ + T+ D++S G ++ E+ITG+
Sbjct: 198 LNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 24/218 (11%)
Query: 317 GFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLK-TGSG-------QGEREFS-AEVEII 366
+ +LG+G V + + P KE AVK + TG G Q RE + EV+I+
Sbjct: 5 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 64
Query: 367 SRVH-HRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK 425
+V H +++ L LV++ + L +L E + + TR +I +
Sbjct: 65 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETR-KIMRALLE 122
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYL 485
+ LH+ I+HRD+K NIL+DD+ + DFG + + V GT YL
Sbjct: 123 VICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKLREVCGTPSYL 177
Query: 486 APEYASSGK------LTEKSDVFSFGVMLLELITGRRP 517
APE ++ D++S GV++ L+ G P
Sbjct: 178 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ +++ T +V+TR
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----W 193
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+ G+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 24/218 (11%)
Query: 317 GFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLK-TGSG-------QGEREFS-AEVEII 366
+ +LG+G V + + P KE AVK + TG G Q RE + EV+I+
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 367 SRVH-HRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAK 425
+V H +++ L LV++ + L +L E + + TR +I +
Sbjct: 78 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETR-KIMRALLE 135
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYL 485
+ LH+ I+HRD+K NIL+DD+ + DFG + + V GT YL
Sbjct: 136 VICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYL 190
Query: 486 APEYASSGK------LTEKSDVFSFGVMLLELITGRRP 517
APE ++ D++S GV++ L+ G P
Sbjct: 191 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 101/234 (43%), Gaps = 43/234 (18%)
Query: 318 FAKSNLLGQGGFGYVHKGVLPNGKEV----------AVKSLKTGSGQGEREF--SAEVEI 365
F ++G+G FG V L N +V +K +T + ER+ + + +
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKW 135
Query: 366 ISRVHH-----RHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIA 420
I+ +H+ +L ++ Y + G L+ +F E L E + + IA
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKF------EDRLPEEMARF--YLAEMVIA 187
Query: 421 LGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMG 480
+ S L Y +HRDIK NIL+D N +ADFG ++ T S+ +G
Sbjct: 188 IDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVG 238
Query: 481 TFGYLAPEYASS-----GKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVE 529
T Y++PE + G+ + D +S GV + E++ G P +SLVE
Sbjct: 239 TPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP----FYAESLVE 288
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
+GL Y+H IIHRD+K +N+ ++++ E + DFGLA+ +++ T +V+TR
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----W 193
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE + + D++S G ++ EL+ G+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 26/212 (12%)
Query: 317 GFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRV-HHRHL 374
G+ +G G + + V E AVK + + +R+ S E+EI+ R H ++
Sbjct: 28 GYVVKETIGVGSYSECKRCVHKATNMEYAVKVID----KSKRDPSEEIEILLRYGQHPNI 83
Query: 375 VSLVGYCIAGGQRMLVYEFVS-----NKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
++L G LV E + +K L E A+ V +G K + Y
Sbjct: 84 ITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSERE-----ASFVLHTIG--KTVEY 136
Query: 430 LHEDCHPRIIHRDIKAANILIDD---NFEAM-VADFGLAKLSNDNHTHVSTRVMGTFGYL 485
LH ++HRD+K +NIL D N E + + DFG AK + + T T ++
Sbjct: 137 LHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFV 192
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
APE E D++S G++L ++ G P
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 101/261 (38%), Gaps = 71/261 (27%)
Query: 324 LGQGGFGYVHKG------VLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRHLV 375
LG+G FG V + + VAVK LK G+ E R +E++I+ + HH ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATR-VRIALG----------- 422
+L+G C GG M++ EF L +L + + + T+ R G
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 154
Query: 423 -------------------SAKGLAYLHEDCHPRIIHRD--------------------- 442
K L+ + E+ P +++D
Sbjct: 155 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 214
Query: 443 ---------IKAANILIDDNFEAMVADFGLAKLSNDNHTHVST-RVMGTFGYLAPEYASS 492
+ A NIL+ + + DFGLA+ + +V ++APE
Sbjct: 215 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD 274
Query: 493 GKLTEKSDVFSFGVMLLELIT 513
T +SDV+SFGV+L E+ +
Sbjct: 275 RVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 101/261 (38%), Gaps = 71/261 (27%)
Query: 324 LGQGGFGYVHKG------VLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRHLV 375
LG+G FG V + + VAVK LK G+ E R +E++I+ + HH ++V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATR-VRIALG----------- 422
+L+G C GG M++ EF L +L + + + T+ R G
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 156
Query: 423 -------------------SAKGLAYLHEDCHPRIIHRD--------------------- 442
K L+ + E+ P +++D
Sbjct: 157 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 216
Query: 443 ---------IKAANILIDDNFEAMVADFGLAKLSNDNHTHVST-RVMGTFGYLAPEYASS 492
+ A NIL+ + + DFGLA+ + +V ++APE
Sbjct: 217 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD 276
Query: 493 GKLTEKSDVFSFGVMLLELIT 513
T +SDV+SFGV+L E+ +
Sbjct: 277 RVYTIQSDVWSFGVLLWEIFS 297
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 26/212 (12%)
Query: 317 GFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRV-HHRHL 374
G+ +G G + + V E AVK + + +R+ S E+EI+ R H ++
Sbjct: 28 GYVVKETIGVGSYSECKRCVHKATNMEYAVKVID----KSKRDPSEEIEILLRYGQHPNI 83
Query: 375 VSLVGYCIAGGQRMLVYEFVS-----NKTLEYHLHGENRPVMDFATRVRIALGSAKGLAY 429
++L G LV E + +K L E A+ V +G K + Y
Sbjct: 84 ITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSERE-----ASFVLHTIG--KTVEY 136
Query: 430 LHEDCHPRIIHRDIKAANILIDD---NFEAM-VADFGLAKLSNDNHTHVSTRVMGTFGYL 485
LH ++HRD+K +NIL D N E + + DFG AK + + T T ++
Sbjct: 137 LHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFV 192
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
APE E D++S G++L ++ G P
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 101/261 (38%), Gaps = 71/261 (27%)
Query: 324 LGQGGFGYVHKG------VLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRHLV 375
LG+G FG V + + VAVK LK G+ E R +E++I+ + HH ++V
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATR-VRIALG----------- 422
+L+G C GG M++ EF L +L + + + T+ R G
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 149
Query: 423 -------------------SAKGLAYLHEDCHPRIIHRD--------------------- 442
K L+ + E+ P +++D
Sbjct: 150 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 209
Query: 443 ---------IKAANILIDDNFEAMVADFGLAKLSNDNHTHVST-RVMGTFGYLAPEYASS 492
+ A NIL+ + + DFGLA+ + +V ++APE
Sbjct: 210 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD 269
Query: 493 GKLTEKSDVFSFGVMLLELIT 513
T +SDV+SFGV+L E+ +
Sbjct: 270 RVYTIQSDVWSFGVLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 101/261 (38%), Gaps = 71/261 (27%)
Query: 324 LGQGGFGYVHKG------VLPNGKEVAVKSLKTGSGQGE-REFSAEVEIISRV-HHRHLV 375
LG+G FG V + + VAVK LK G+ E R +E++I+ + HH ++V
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 376 SLVGYCI-AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATR-VRIALG----------- 422
+L+G C GG M++ EF L +L + + + T+ R G
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 147
Query: 423 -------------------SAKGLAYLHEDCHPRIIHRD--------------------- 442
K L+ + E+ P +++D
Sbjct: 148 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 207
Query: 443 ---------IKAANILIDDNFEAMVADFGLAKLSNDNHTHVST-RVMGTFGYLAPEYASS 492
+ A NIL+ + + DFGLA+ + +V ++APE
Sbjct: 208 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD 267
Query: 493 GKLTEKSDVFSFGVMLLELIT 513
T +SDV+SFGV+L E+ +
Sbjct: 268 RVYTIQSDVWSFGVLLWEIFS 288
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 105/247 (42%), Gaps = 39/247 (15%)
Query: 317 GFAKSNLLGQGGFG-YVHKGVLPNGKEVAVKS-LKTGSGQGEREFSAEVEIISRVHHRHL 374
F ++LG G G V++G+ N ++VAVK L +RE + R H
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDN-RDVAVKRILPECFSFADREVQ-----LLRESDEHP 78
Query: 375 VSLVGYCIAGGQRM--LVYEFVSNKTLEYHLHGENRPVMDFA----TRVRIALGSAKGLA 428
+ +C ++ + E + EY E + DFA + + + GLA
Sbjct: 79 NVIRYFCTEKDRQFQYIAIELCAATLQEY---VEQK---DFAHLGLEPITLLQQTTSGLA 132
Query: 429 YLHEDCHPRIIHRDIKAANILID-----DNFEAMVADFGLAKLSNDNHTHVSTR--VMGT 481
+LH I+HRD+K NILI +AM++DFGL K S R V GT
Sbjct: 133 HLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGT 189
Query: 482 FGYLAPEYASSG---KLTEKSDVFSFGVMLLELIT-GRRPVDMTMMEDSLVEWARPLLGA 537
G++APE S T D+FS G + +I+ G P SL A LLGA
Sbjct: 190 EGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFG-----KSLQRQANILLGA 244
Query: 538 ALEDGIY 544
D ++
Sbjct: 245 CSLDCLH 251
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 312 AAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSG-------QGEREFSAEVE 364
A G + +LLG+G +G V K VL + + + +++K GE E++
Sbjct: 1 AKLIGKYLMGDLLGEGSYGKV-KEVL-DSETLCRRAVKILKKKKLRRIPNGEANVKKEIQ 58
Query: 365 IISRVHHRHLVSLVG---------------YCIAGGQRMLVYEFVSNKTLEY-HLHGENR 408
++ R+ H++++ LV YC+ G Q ML + V K HG
Sbjct: 59 LLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEML--DSVPEKRFPVCQAHGYFC 116
Query: 409 PVMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSN 468
++D GL YLH I+H+DIK N+L+ ++ G+A+ +
Sbjct: 117 QLID-------------GLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALH 160
Query: 469 DNHTHVSTRV-MGTFGYLAPEYASSGKLTE--KSDVFSFGVMLLELITGRRPVD 519
+ R G+ + PE A+ K D++S GV L + TG P +
Sbjct: 161 PFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 15/208 (7%)
Query: 321 SNLLGQGGFGYVHKGV-LPNGKEVAVK-----SLKTGSGQGEREFSAEVEIISRVHHRHL 374
++G+G F V + + G++ AVK + G + E I + H H+
Sbjct: 31 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 90
Query: 375 VSLVGYCIAGGQRMLVYEFVSNKTLEYHL--HGENRPVMDFATRVRIALGSAKGLAYLHE 432
V L+ + G +V+EF+ L + + + V A + L Y H+
Sbjct: 91 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 150
Query: 433 DCHPRIIHRDIKAANILI---DDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
+ IIHRD+K +L+ +++ + FG+A ++ RV GT ++APE
Sbjct: 151 N---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPHFMAPEV 206
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ DV+ GV+L L++G P
Sbjct: 207 VKREPYGKPVDVWGCGVILFILLSGCLP 234
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 15/208 (7%)
Query: 321 SNLLGQGGFGYVHKGV-LPNGKEVAVK-----SLKTGSGQGEREFSAEVEIISRVHHRHL 374
++G+G F V + + G++ AVK + G + E I + H H+
Sbjct: 29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 375 VSLVGYCIAGGQRMLVYEFVSNKTLEYHL--HGENRPVMDFATRVRIALGSAKGLAYLHE 432
V L+ + G +V+EF+ L + + + V A + L Y H+
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148
Query: 433 DCHPRIIHRDIKAANILI---DDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
+ IIHRD+K +L+ +++ + FG+A ++ RV GT ++APE
Sbjct: 149 N---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPHFMAPEV 204
Query: 490 ASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ DV+ GV+L L++G P
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGE---REFSAEVEIISRVHHRHLVSLVG 379
+G G +G V + +G++VA+K L + Q E + E+ ++ + H +++ L+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKL-SRPFQSEIFAKRAYRELLLLKHMQHENVIGLLD 108
Query: 380 YCIAGGQRMLVYEFVSNKTLEYHLHGENRPVM--DFATR--VRIALGSAKGLAYLHEDCH 435
Y+F + + + +M +F+ + KGL Y+H
Sbjct: 109 VFTPASSLRNFYDFYLVMPF---MQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG- 164
Query: 436 PRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFGYLAPEYASSGK 494
++HRD+K N+ ++++ E + DFGLA+ ++ T +V TR Y APE S
Sbjct: 165 --VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWM 217
Query: 495 -LTEKSDVFSFGVMLLELITGR 515
+ D++S G ++ E++TG+
Sbjct: 218 HYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 320 KSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVH-HRHLVSL 377
+ ++LG+G V + L +E AVK ++ G EVE++ + HR+++ L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 378 VGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPR 437
+ + + LV+E + ++ H+H + R + V + A L +LH +
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIH-KRRHFNELEASV-VVQDVASALDFLH---NKG 131
Query: 438 IIHRDIKAANILIDDNFE---AMVADFGLA---KLSNDNHTHVSTRVM---GTFGYLAPE 488
I HRD+K NIL + + + DF L KL+ D + ++ G+ Y+APE
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 489 ----YASSGKLTEK-SDVFSFGVMLLELITGRRP 517
++ + +K D++S GV+L L++G P
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 53/93 (56%), Gaps = 10/93 (10%)
Query: 425 KGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHT-HVSTRVMGTFG 483
KGL Y+H ++HRD+K N+ ++++ E + DFGLA+ ++ T +V TR
Sbjct: 137 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----W 188
Query: 484 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
Y APE S + D++S G ++ E++TG+
Sbjct: 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 16/202 (7%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEVEIISRVHHRHLVSLVGY 380
LG+G F V + V + G+E A + T S + ++ E I + H ++V L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 381 CIAGGQRMLVYEFVSNKTL-EYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPR-I 438
G L+++ V+ L E + E D + ++ L A LH CH +
Sbjct: 79 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE-----AVLH--CHQMGV 131
Query: 439 IHRDIKAANILIDDNFE---AMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKL 495
+HR++K N+L+ + +ADFGLA + + GT GYL+PE
Sbjct: 132 VHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 190
Query: 496 TEKSDVFSFGVMLLELITGRRP 517
+ D+++ GV+L L+ G P
Sbjct: 191 GKPVDLWACGVILYILLVGYPP 212
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 96/221 (43%), Gaps = 24/221 (10%)
Query: 323 LLGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGEREFS------AEVEIISRVH----H 371
LLG+GGFG V G L + +VA+K + G S EV ++ +V H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 372 RHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLH 431
++ L+ + MLV E + E P+ + +R A A H
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVA---AIQH 154
Query: 432 EDCHPR-IIHRDIKAANILID-DNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEY 489
CH R ++HRDIK NILID A + DFG L +D T GT Y PE+
Sbjct: 155 --CHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPY---TDFDGTRVYSPPEW 209
Query: 490 ASSGKL-TEKSDVFSFGVMLLELITGRRPV--DMTMMEDSL 527
S + + V+S G++L +++ G P D ++E L
Sbjct: 210 ISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAEL 250
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 324 LGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGER------EFSAEVEIISRVHHRHLVS 376
LG G F V K G E A K +K + R E EV I+ +V H ++++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 377 LVGYCIAGGQRMLVYEFVSNKTL-EYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
L +L+ E VS L ++ E+ + + ++ L G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---GVNYLHTK-- 134
Query: 436 PRIIHRDIKAANI-LIDDNF---EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYAS 491
+I H D+K NI L+D N + DFGLA D + GT ++APE +
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIVN 191
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRP 517
L ++D++S GV+ L++G P
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 20/206 (9%)
Query: 324 LGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGER------EFSAEVEIISRVHHRHLVS 376
LG G F V K + G E A K +K + R E EV I+ +V H ++++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 377 LVGYCIAGGQRMLVYEFVSN-KTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
L +L+ E VS + ++ E+ + + ++ L G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---GVNYLH---T 133
Query: 436 PRIIHRDIKAANI-LIDDNF---EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYAS 491
+I H D+K NI L+D N + DFGLA D + GT ++APE +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIVN 191
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRP 517
L ++D++S GV+ L++G P
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 109/280 (38%), Gaps = 44/280 (15%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKT--GSGQGEREFSAEVEIISRVHHRHLVSLVGYC 381
L + G + KG G ++ VK LK S + R+F+ E + H +++ ++G C
Sbjct: 18 LNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 382 IA--GGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
+ L+ + +L LH V+D + V+ AL A+G A+LH P I
Sbjct: 77 QSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHT-LEPLIP 135
Query: 440 HRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEK- 498
+ + ++ ID++ A ++ V AP + + L +K
Sbjct: 136 RHALNSRSVXIDEDXTARIS-----------XADVKFSFQSPGRXYAPAWVAPEALQKKP 184
Query: 499 -------SDVFSFGVMLLELITGRRP-VDMTMMEDSLVEWARPLLGAALEDGIYDGLVDP 550
+D +SF V+L EL+T P D++ E +G + +GL P
Sbjct: 185 EDTNRRSADXWSFAVLLWELVTREVPFADLSNXE----------IGXKVA---LEGL-RP 230
Query: 551 RLEHNYVPHEMARLVACGAASIRHSARKRPKMSQIVRALE 590
+ PH C KRPK IV LE
Sbjct: 231 TIPPGISPHVSKLXKICX----NEDPAKRPKFDXIVPILE 266
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 26/214 (12%)
Query: 315 TGGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRV-HHR 372
T G+ +G G + + + E AVK + + +R+ + E+EI+ R H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIID----KSKRDPTEEIEILLRYGQHP 76
Query: 373 HLVSLVGYCIAGGQRMLVYEFVS-----NKTLEYHLHGENRPVMDFATRVRIALGSAKGL 427
++++L G +V E + +K L E A+ V + K +
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSERE-----ASAVLFTI--TKTV 129
Query: 428 AYLHEDCHPRIIHRDIKAANILIDD---NFEAM-VADFGLAKLSNDNHTHVSTRVMGTFG 483
YLH ++HRD+K +NIL D N E++ + DFG AK + + T T
Sbjct: 130 EYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY-TAN 185
Query: 484 YLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
++APE D++S GV+L ++TG P
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 20/206 (9%)
Query: 324 LGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGER------EFSAEVEIISRVHHRHLVS 376
LG G F V K + G E A K +K + R E EV I+ +V H ++++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 377 LVGYCIAGGQRMLVYEFVSN-KTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
L +L+ E VS + ++ E+ + + ++ L G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---GVNYLH---T 133
Query: 436 PRIIHRDIKAANI-LIDDNF---EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYAS 491
+I H D+K NI L+D N + DFGLA D + GT ++APE +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIVN 191
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRP 517
L ++D++S GV+ L++G P
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKS-LKTGSGQGEREFSA-EVEIISRVHHRHL 374
+ K +G+G +G V K G+ VA+K L++ ++ + E+ ++ ++ H +L
Sbjct: 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNL 64
Query: 375 VSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE-D 433
V+L+ + LV+E+ + L + L R V + + I + + + + H+ +
Sbjct: 65 VNLLEVFRRKRRLHLVFEYCDHTVL-HELDRYQRGVPEHLVK-SITWQTLQAVNFCHKHN 122
Query: 434 CHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE-YASS 492
C IHRD+K NILI + + DFG A+L + V T Y +PE
Sbjct: 123 C----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV-ATRWYRSPELLVGD 177
Query: 493 GKLTEKSDVFSFGVMLLELITG 514
+ DV++ G + EL++G
Sbjct: 178 TQYGPPVDVWAIGCVFAELLSG 199
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 86/201 (42%), Gaps = 18/201 (8%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCI 382
LG+G FG VH+ G + AVK ++ + E E+ + + +V L G
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVR 155
Query: 383 AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSA-KGLAYLHEDCHPRIIHR 441
G + E + +L + + D R LG A +GL YLH RI+H
Sbjct: 156 EGPWVNIFMELLEGGSLGQLVKEQGCLPED---RALYYLGQALEGLEYLHSR---RILHG 209
Query: 442 DIKAANILID-DNFEAMVADFGLAKLSNDNHTHVSTR----VMGTFGYLAPEYASSGKLT 496
D+KA N+L+ D A + DFG A + S + GT ++APE
Sbjct: 210 DVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCD 269
Query: 497 EKSDVFSFGVMLLELITGRRP 517
K DV+S M+L ++ G P
Sbjct: 270 AKVDVWSSCCMMLHMLNGCHP 290
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 324 LGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGER------EFSAEVEIISRVHHRHLVS 376
LG G F V K G E A K +K + R E EV I+ +V H ++++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 377 LVGYCIAGGQRMLVYEFVSN-KTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
L +L+ E VS + ++ E+ + + ++ L G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---GVNYLHT--- 133
Query: 436 PRIIHRDIKAANI-LIDDNF---EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYAS 491
+I H D+K NI L+D N + DFGLA D + GT ++APE +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIVN 191
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRP 517
L ++D++S GV+ L++G P
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYASS---- 492
+IHRD+K N+L+D + +ADFG K+ H T V GT Y++PE S
Sbjct: 195 LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDYISPEVLKSQGGD 253
Query: 493 GKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLV 528
G + D +S GV L E++ G P DSLV
Sbjct: 254 GYYGRECDWWSVGVFLFEMLVGDTP----FYADSLV 285
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 324 LGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGER------EFSAEVEIISRVHHRHLVS 376
LG G F V K G E A K +K + R E EV I+ +V H ++++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 377 LVGYCIAGGQRMLVYEFVSN-KTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
L +L+ E VS + ++ E+ + + ++ L G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---GVNYLH---T 133
Query: 436 PRIIHRDIKAANI-LIDDNF---EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYAS 491
+I H D+K NI L+D N + DFGLA D + GT ++APE +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIVN 191
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRP 517
L ++D++S GV+ L++G P
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEV--EIISRVHHRHLVSL 377
LLG GGFG V+ G+ + + VA+K ++ S GE V E++ L+
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 82
Query: 378 VGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE---- 432
V +G R+L +E + L + + DF T R AL ++ +
Sbjct: 83 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEA 141
Query: 433 --DCHPR-IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
CH ++HRDIK NILID N E + DFG L D V T GT Y PE
Sbjct: 142 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 198
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRPVD 519
+ + +S V+S G++L +++ G P +
Sbjct: 199 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 324 LGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGER------EFSAEVEIISRVHHRHLVS 376
LG G F V K G E A K +K + R E EV I+ +V H ++++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 377 LVGYCIAGGQRMLVYEFVSN-KTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
L +L+ E VS + ++ E+ + + ++ L G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---GVNYLHT--- 133
Query: 436 PRIIHRDIKAANI-LIDDNF---EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYAS 491
+I H D+K NI L+D N + DFGLA D + GT ++APE +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIVN 191
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRP 517
L ++D++S GV+ L++G P
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEV--EIISRVHHRHLVSL 377
LLG GGFG V+ G+ + + VA+K ++ S GE V E++ L+
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 63
Query: 378 VGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE---- 432
V +G R+L +E + L + + DF T R AL ++ +
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEA 122
Query: 433 --DCHPR-IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
CH ++HRDIK NILID N E + DFG L D V T GT Y PE
Sbjct: 123 VRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 179
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRPVD 519
+ + +S V+S G++L +++ G P +
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEV--EIISRVHHRHLVSL 377
LLG GGFG V+ G+ + + VA+K ++ S GE V E++ L+
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 83
Query: 378 VGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE---- 432
V +G R+L +E + L + + DF T R AL ++ +
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEA 142
Query: 433 --DCHPR-IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
CH ++HRDIK NILID N E + DFG L D V T GT Y PE
Sbjct: 143 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 199
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRPVD 519
+ + +S V+S G++L +++ G P +
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEV--EIISRVHHRHLVSL 377
LLG GGFG V+ G+ + + VA+K ++ S GE V E++ L+
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 83
Query: 378 VGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE---- 432
V +G R+L +E + L + + DF T R AL ++ +
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEA 142
Query: 433 --DCHPR-IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
CH ++HRDIK NILID N E + DFG L D V T GT Y PE
Sbjct: 143 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 199
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRPVD 519
+ + +S V+S G++L +++ G P +
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEV--EIISRVHHRHLVSL 377
LLG GGFG V+ G+ + + VA+K ++ S GE V E++ L+
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 82
Query: 378 VGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE---- 432
V +G R+L +E + L + + DF T R AL ++ +
Sbjct: 83 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEA 141
Query: 433 --DCHPR-IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
CH ++HRDIK NILID N E + DFG L D V T GT Y PE
Sbjct: 142 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 198
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRPVD 519
+ + +S V+S G++L +++ G P +
Sbjct: 199 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEV--EIISRVHHRHLVSL 377
LLG GGFG V+ G+ + + VA+K ++ S GE V E++ L+
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 102
Query: 378 VGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE---- 432
V +G R+L +E + L + + DF T R AL ++ +
Sbjct: 103 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEA 161
Query: 433 --DCHPR-IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
CH ++HRDIK NILID N E + DFG L D V T GT Y PE
Sbjct: 162 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 218
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRPVD 519
+ + +S V+S G++L +++ G P +
Sbjct: 219 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 250
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEV--EIISRVHHRHLVSL 377
LLG GGFG V+ G+ + + VA+K ++ S GE V E++ L+
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 67
Query: 378 VGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE---- 432
V +G R+L +E + L + + DF T R AL ++ +
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITE-RGALQEELARSFFWQVLEA 126
Query: 433 --DCHPR-IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
CH ++HRDIK NILID N E + DFG L D V T GT Y PE
Sbjct: 127 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 183
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRPVD 519
+ + +S V+S G++L +++ G P +
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 215
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEV--EIISRVHHRHLVSL 377
LLG GGFG V+ G+ + + VA+K ++ S GE V E++ L+
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 96
Query: 378 VGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE---- 432
V +G R+L +E + L + + DF T R AL ++ +
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEA 155
Query: 433 --DCHPR-IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
CH ++HRDIK NILID N E + DFG L D V T GT Y PE
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 212
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRPVD 519
+ + +S V+S G++L +++ G P +
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEV--EIISRVHHRHLVSL 377
LLG GGFG V+ G+ + + VA+K ++ S GE V E++ L+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 95
Query: 378 VGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE---- 432
V +G R+L +E + L + + DF T R AL ++ +
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEA 154
Query: 433 --DCHPR-IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
CH ++HRDIK NILID N E + DFG L D V T GT Y PE
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 211
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRPVD 519
+ + +S V+S G++L +++ G P +
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCI 382
LG+G FG VH+ G + AVK ++ + E E+ + + +V L G
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVR 136
Query: 383 AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSA-KGLAYLHEDCHPRIIHR 441
G + E + +L + + D R LG A +GL YLH RI+H
Sbjct: 137 EGPWVNIFMELLEGGSLGQLVKEQGCLPED---RALYYLGQALEGLEYLHSR---RILHG 190
Query: 442 DIKAANILID-DNFEAMVADFGLA------KLSNDNHTHVSTRVMGTFGYLAPEYASSGK 494
D+KA N+L+ D A + DFG A L D T + GT ++APE
Sbjct: 191 DVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLT--GDYIPGTETHMAPEVVLGRS 248
Query: 495 LTEKSDVFSFGVMLLELITGRRP 517
K DV+S M+L ++ G P
Sbjct: 249 CDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 90/227 (39%), Gaps = 25/227 (11%)
Query: 301 FNKSTFTYDELAAATGGFAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGE 356
F K T + A F + LG G FG V HK +G A+K L
Sbjct: 13 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKL 69
Query: 357 REFS---AEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PV 410
++ E I+ V+ LV L +V E+V+ + HL R P
Sbjct: 70 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 129
Query: 411 MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDN 470
F +I L YLH +I+RD+K N+LID+ V DFG AK
Sbjct: 130 ARFYA-AQIVLT----FEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR 181
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ + GT YLAPE S + D ++ GV++ E+ G P
Sbjct: 182 ----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEV--EIISRVHHRHLVSL 377
LLG GGFG V+ G+ + + VA+K ++ S GE V E++ L+
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 115
Query: 378 VGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE---- 432
V +G R+L +E + L + + DF T R AL ++ +
Sbjct: 116 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEA 174
Query: 433 --DCHPR-IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
CH ++HRDIK NILID N E + DFG L D V T GT Y PE
Sbjct: 175 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 231
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRPVD 519
+ + +S V+S G++L +++ G P +
Sbjct: 232 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 263
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEV--EIISRVHHRHLVSL 377
LLG GGFG V+ G+ + + VA+K ++ S GE V E++ L+
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 110
Query: 378 VGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE---- 432
V +G R+L +E + L + + DF T R AL ++ +
Sbjct: 111 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEA 169
Query: 433 --DCHPR-IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
CH ++HRDIK NILID N E + DFG L D V T GT Y PE
Sbjct: 170 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 226
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRPVD 519
+ + +S V+S G++L +++ G P +
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEV--EIISRVHHRHLVSL 377
LLG GGFG V+ G+ + + VA+K ++ S GE V E++ L+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 95
Query: 378 VGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE---- 432
V +G R+L +E + L + + DF T R AL ++ +
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEA 154
Query: 433 --DCHPR-IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
CH ++HRDIK NILID N E + DFG L D V T GT Y PE
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 211
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRPVD 519
+ + +S V+S G++L +++ G P +
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEV--EIISRVHHRHLVSL 377
LLG GGFG V+ G+ + + VA+K ++ S GE V E++ L+
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 68
Query: 378 VGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE---- 432
V +G R+L +E + L + + DF T R AL ++ +
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEA 127
Query: 433 --DCHPR-IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
CH ++HRDIK NILID N E + DFG L D V T GT Y PE
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 184
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRPVD 519
+ + +S V+S G++L +++ G P +
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEV--EIISRVHHRHLVSL 377
LLG GGFG V+ G+ + + VA+K ++ S GE V E++ L+
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 67
Query: 378 VGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE---- 432
V +G R+L +E + L + + DF T R AL ++ +
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEA 126
Query: 433 --DCHPR-IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
CH ++HRDIK NILID N E + DFG L D V T GT Y PE
Sbjct: 127 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 183
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRPVD 519
+ + +S V+S G++L +++ G P +
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 215
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEV--EIISRVHHRHLVSL 377
LLG GGFG V+ G+ + + VA+K ++ S GE V E++ L+
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 96
Query: 378 VGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE---- 432
V +G R+L +E + L + + DF T R AL ++ +
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEA 155
Query: 433 --DCHPR-IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
CH ++HRDIK NILID N E + DFG L D V T GT Y PE
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 212
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRPVD 519
+ + +S V+S G++L +++ G P +
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEV--EIISRVHHRHLVSL 377
LLG GGFG V+ G+ + + VA+K ++ S GE V E++ L+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 95
Query: 378 VGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE---- 432
V +G R+L +E + L + + DF T R AL ++ +
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEA 154
Query: 433 --DCHPR-IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
CH ++HRDIK NILID N E + DFG L D V T GT Y PE
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 211
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRPVD 519
+ + +S V+S G++L +++ G P +
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEV--EIISRVHHRHLVSL 377
LLG GGFG V+ G+ + + VA+K ++ S GE V E++ L+
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 96
Query: 378 VGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE---- 432
V +G R+L +E + L + + DF T R AL ++ +
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEA 155
Query: 433 --DCHPR-IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
CH ++HRDIK NILID N E + DFG L D V T GT Y PE
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 212
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRPVD 519
+ + +S V+S G++L +++ G P +
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEV--EIISRVHHRHLVSL 377
LLG GGFG V+ G+ + + VA+K ++ S GE V E++ L+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 95
Query: 378 VGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE---- 432
V +G R+L +E + L + + DF T R AL ++ +
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEA 154
Query: 433 --DCHPR-IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
CH ++HRDIK NILID N E + DFG L D V T GT Y PE
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 211
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRPVD 519
+ + +S V+S G++L +++ G P +
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEV--EIISRVHHRHLVSL 377
LLG GGFG V+ G+ + + VA+K ++ S GE V E++ L+
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 68
Query: 378 VGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE---- 432
V +G R+L +E + L + + DF T R AL ++ +
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEA 127
Query: 433 --DCHPR-IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
CH ++HRDIK NILID N E + DFG L D V T GT Y PE
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 184
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRPVD 519
+ + +S V+S G++L +++ G P +
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEV--EIISRVHHRHLVSL 377
LLG GGFG V+ G+ + + VA+K ++ S GE V E++ L+
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 96
Query: 378 VGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE---- 432
V +G R+L +E + L + + DF T R AL ++ +
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEA 155
Query: 433 --DCHPR-IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
CH ++HRDIK NILID N E + DFG L D V T GT Y PE
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 212
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRPVD 519
+ + +S V+S G++L +++ G P +
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEV--EIISRVHHRHLVSL 377
LLG GGFG V+ G+ + + VA+K ++ S GE V E++ L+
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 63
Query: 378 VGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE---- 432
V +G R+L +E + L + + DF T R AL ++ +
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEA 122
Query: 433 --DCHPR-IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
CH ++HRDIK NILID N E + DFG L D V T GT Y PE
Sbjct: 123 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 179
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRPVD 519
+ + +S V+S G++L +++ G P +
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEV--EIISRVHHRHLVSL 377
LLG GGFG V+ G+ + + VA+K ++ S GE V E++ L+
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 83
Query: 378 VGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE---- 432
V +G R+L +E + L + + DF T R AL ++ +
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEA 142
Query: 433 --DCHPR-IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
CH ++HRDIK NILID N E + DFG L D V T GT Y PE
Sbjct: 143 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 199
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRPVD 519
+ + +S V+S G++L +++ G P +
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 25/212 (11%)
Query: 318 FAKSNLLGQGGFGYV--HKGVLPNGKEVAVKSLKTGSGQGEREFSA---EVEIISRVHHR 372
+ + LG G +G V K L G E A+K +K S A EV ++ ++ H
Sbjct: 23 YQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHP 81
Query: 373 HLVSLVGYCIAGGQRMLVYE-FVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLH 431
+++ L + LV E + + + + + +D A ++ L G YLH
Sbjct: 82 NIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS---GTTYLH 138
Query: 432 EDCHPRIIHRDIKAANILIDDNFE---AMVADFGLAKLSNDNHTHVSTRV---MGTFGYL 485
+ I+HRD+K N+L++ + DFGL+ H V ++ +GT Y+
Sbjct: 139 KH---NIVHRDLKPENLLLESKSRDALIKIVDFGLS-----AHFEVGGKMKERLGTAYYI 190
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
APE K EK DV+S GV+L L+ G P
Sbjct: 191 APEVLRK-KYDEKCDVWSCGVILYILLCGYPP 221
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEV--EIISRVHHRHLVSL 377
LLG GGFG V+ G+ + + VA+K ++ S GE V E++ L+
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 110
Query: 378 VGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE---- 432
V +G R+L +E + L + + DF T R AL ++ +
Sbjct: 111 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEA 169
Query: 433 --DCHPR-IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
CH ++HRDIK NILID N E + DFG L D V T GT Y PE
Sbjct: 170 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 226
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRPVD 519
+ + +S V+S G++L +++ G P +
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 89/227 (39%), Gaps = 25/227 (11%)
Query: 301 FNKSTFTYDELAAATGGFAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGE 356
F K T + A F + LG G FG V HK +G A+K L
Sbjct: 47 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKL 103
Query: 357 REFS---AEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PV 410
++ E I+ V+ LV L +V E+V+ + HL R P
Sbjct: 104 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH 163
Query: 411 MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDN 470
F +I L YLH +I+RD+K N+LID V DFG AK
Sbjct: 164 ARFYA-AQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 215
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ + GT YLAPE S + D ++ GV++ E+ G P
Sbjct: 216 ----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEV--EIISRVHHRHLVSL 377
LLG GGFG V+ G+ + + VA+K ++ S GE V E++ L+
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 66
Query: 378 VGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE---- 432
V +G R+L +E + L + + DF T R AL ++ +
Sbjct: 67 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEA 125
Query: 433 --DCHPR-IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
CH ++HRDIK NILID N E + DFG L D V T GT Y PE
Sbjct: 126 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 182
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRPVD 519
+ + +S V+S G++L +++ G P +
Sbjct: 183 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 214
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEV--EIISRVHHRHLVSL 377
LLG GGFG V+ G+ + + VA+K ++ S GE V E++ L+
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 68
Query: 378 VGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE---- 432
V +G R+L +E + L + + DF T R AL ++ +
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEA 127
Query: 433 --DCHPR-IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
CH ++HRDIK NILID N E + DFG L D V T GT Y PE
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 184
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRPVD 519
+ + +S V+S G++L +++ G P +
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEV--EIISRVHHRHLVSL 377
LLG GGFG V+ G+ + + VA+K ++ S GE V E++ L+
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 63
Query: 378 VGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE---- 432
V +G R+L +E + L + + DF T R AL ++ +
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEA 122
Query: 433 --DCHPR-IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
CH ++HRDIK NILID N E + DFG L D V T GT Y PE
Sbjct: 123 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 179
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRPVD 519
+ + +S V+S G++L +++ G P +
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 89/227 (39%), Gaps = 25/227 (11%)
Query: 301 FNKSTFTYDELAAATGGFAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGE 356
F K T + A F + LG G FG V HK +G A+K L
Sbjct: 47 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKL 103
Query: 357 REFS---AEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PV 410
++ E I+ V+ LV L +V E+V+ + HL R P
Sbjct: 104 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 163
Query: 411 MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDN 470
F +I L YLH +I+RD+K N+LID V DFG AK
Sbjct: 164 ARFYA-AQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG- 214
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ + GT YLAPE S + D ++ GV++ E+ G P
Sbjct: 215 ---ATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 14/201 (6%)
Query: 324 LGQGGFGYVHKGVLPN-GKEVAVKSLKTG--SGQGEREFSAEVEIISRVHHRHLVSLVGY 380
LG+G F V + V +E A K + T S + ++ E I + H ++V L
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 381 CIAGGQRMLVYEFVSNKTL-EYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRII 439
G LV++ V+ L E + E D + + L S ++H+ I+
Sbjct: 99 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVN---HIHQH---DIV 152
Query: 440 HRDIKAANILIDDNFE---AMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLT 496
HRD+K N+L+ + +ADFGLA + GT GYL+PE
Sbjct: 153 HRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPGYLSPEVLRKDPYG 211
Query: 497 EKSDVFSFGVMLLELITGRRP 517
+ D+++ GV+L L+ G P
Sbjct: 212 KPVDIWACGVILYILLVGYPP 232
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 89/227 (39%), Gaps = 25/227 (11%)
Query: 301 FNKSTFTYDELAAATGGFAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGE 356
F K T + A F + LG G FG V HK +G A+K L
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKL 82
Query: 357 REFS---AEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PV 410
++ E I+ V+ LV L +V E+V+ + HL R P
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 411 MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDN 470
F +I L YLH +I+RD+K N+LID V DFG AK
Sbjct: 143 ARFYA-AQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ + GT YLAPE S + D ++ GV++ E+ G P
Sbjct: 195 ----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 89/227 (39%), Gaps = 25/227 (11%)
Query: 301 FNKSTFTYDELAAATGGFAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGE 356
F K T + A F + LG G FG V HK +G A+K L
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKL 82
Query: 357 REFS---AEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PV 410
++ E I+ V+ LV L +V E+V+ + HL R P
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH 142
Query: 411 MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDN 470
F +I L YLH +I+RD+K N+LID V DFG AK
Sbjct: 143 ARFYA-AQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ + GT YLAPE S + D ++ GV++ E+ G P
Sbjct: 195 ----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 323 LLGQGGFGYVHKGV-LPNGKEVAVKSLKTG--SGQGEREFSAEV--EIISRVHHRHLVSL 377
LLG GGFG V+ G+ + + VA+K ++ S GE V E++ L+
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 90
Query: 378 VGYCIAGGQRML-VYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHE---- 432
V +G R+L +E + L + + DF T R AL ++ +
Sbjct: 91 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEA 149
Query: 433 --DCHPR-IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
CH ++HRDIK NILID N E + DFG L D V T GT Y PE
Sbjct: 150 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 206
Query: 489 YASSGKLTEKS-DVFSFGVMLLELITGRRPVD 519
+ + +S V+S G++L +++ G P +
Sbjct: 207 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 89/227 (39%), Gaps = 25/227 (11%)
Query: 301 FNKSTFTYDELAAATGGFAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGE 356
F K T + A F + LG G FG V HK +G A+K L
Sbjct: 27 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKL 83
Query: 357 REFS---AEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PV 410
++ E I+ V+ LV L +V E+V+ + HL R P
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 143
Query: 411 MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDN 470
F +I L YLH +I+RD+K N+LID V DFG AK
Sbjct: 144 ARFYA-AQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 195
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ + GT YLAPE S + D ++ GV++ E+ G P
Sbjct: 196 ----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 89/227 (39%), Gaps = 25/227 (11%)
Query: 301 FNKSTFTYDELAAATGGFAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGE 356
F K T + A F + LG G FG V HK +G A+K L
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKL 82
Query: 357 REFS---AEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PV 410
++ E I+ V+ LV L +V E+V+ + HL R P
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPH 142
Query: 411 MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDN 470
F +I L YLH +I+RD+K N+LID V DFG AK
Sbjct: 143 ARFYA-AQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ + GT YLAPE S + D ++ GV++ E+ G P
Sbjct: 195 ----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 92/214 (42%), Gaps = 26/214 (12%)
Query: 315 TGGFAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRV-HHR 372
T G+ +G G + + + E AVK + + +R+ + E+EI+ R H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIID----KSKRDPTEEIEILLRYGQHP 76
Query: 373 HLVSLVGYCIAGGQRMLVYEF-----VSNKTLEYHLHGENRPVMDFATRVRIALGSAKGL 427
++++L G +V E + +K L E A+ V + K +
Sbjct: 77 NIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSERE-----ASAVLFTI--TKTV 129
Query: 428 AYLHEDCHPRIIHRDIKAANILIDD---NFEAM-VADFGLAKLSNDNHTHVSTRVMGTFG 483
YLH ++HRD+K +NIL D N E++ + DFG AK + + T T
Sbjct: 130 EYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY-TAN 185
Query: 484 YLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
++APE D++S GV+L +TG P
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 89/227 (39%), Gaps = 25/227 (11%)
Query: 301 FNKSTFTYDELAAATGGFAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGE 356
F K T + A F + LG G FG V HK +G A+K L
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKL 82
Query: 357 REFS---AEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PV 410
++ E I+ V+ LV L +V E+V+ + HL R P
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH 142
Query: 411 MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDN 470
F +I L YLH +I+RD+K N+LID V DFG AK
Sbjct: 143 ARFYA-AQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ + GT YLAPE S + D ++ GV++ E+ G P
Sbjct: 195 ----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 31/223 (13%)
Query: 304 STFT----YDELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLK---TGSGQGE 356
STFT Y +L G QG VL G VAVK L +
Sbjct: 16 STFTVLKRYQQLKPIGSG-------AQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAK 66
Query: 357 REFSAEVEIISRVHHRHLVSLVGY-----CIAGGQRMLVYEFVSNKTLEYHLHGENRPVM 411
R + E+ ++ V+H++++SL+ + Q + + + + L +H E +
Sbjct: 67 RAYR-ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME----L 121
Query: 412 DFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNH 471
D + G+ +LH IIHRD+K +NI++ + + DFGLA+ ++ N
Sbjct: 122 DHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTN- 177
Query: 472 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITG 514
+ T + T Y APE E D++S G ++ EL+ G
Sbjct: 178 -FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 16/122 (13%)
Query: 408 RPVMDFATRVRIALGSAK----GLAYLHEDCHPRIIHRDIKAANILIDDN--FEAMVADF 461
R +DF R ++ + L YLH + I HRDIK N L N FE + DF
Sbjct: 158 RESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDF 214
Query: 462 GLA----KLSNDNHTHVSTRVMGTFGYLAPEYASSGKLT--EKSDVFSFGVMLLELITGR 515
GL+ KL+N + ++T+ GT ++APE ++ + K D +S GV+L L+ G
Sbjct: 215 GLSKEFYKLNNGEYYGMTTKA-GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGA 273
Query: 516 RP 517
P
Sbjct: 274 VP 275
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 89/227 (39%), Gaps = 25/227 (11%)
Query: 301 FNKSTFTYDELAAATGGFAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGE 356
F K T + A F + LG G FG V HK +G A+K L
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKL 82
Query: 357 REFS---AEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PV 410
++ E I+ V+ LV L +V E+V+ + HL R P
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 411 MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDN 470
F +I L YLH +I+RD+K N+LID V DFG AK
Sbjct: 143 ARFYA-AQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ + GT YLAPE S + D ++ GV++ E+ G P
Sbjct: 195 ----TWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 89/227 (39%), Gaps = 25/227 (11%)
Query: 301 FNKSTFTYDELAAATGGFAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGE 356
F K T + A F + LG G FG V HK +G A+K L
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKL 82
Query: 357 REFS---AEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PV 410
++ E I+ V+ LV L +V E+V+ + HL R P
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH 142
Query: 411 MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDN 470
F +I L YLH +I+RD+K N+LID V DFG AK
Sbjct: 143 ARFYA-AQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ + GT YLAPE S + D ++ GV++ E+ G P
Sbjct: 195 ----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 89/227 (39%), Gaps = 25/227 (11%)
Query: 301 FNKSTFTYDELAAATGGFAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGE 356
F K T + A F + LG G FG V HK +G A+K L
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKL 82
Query: 357 REFS---AEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PV 410
++ E I+ V+ LV L +V E+V+ + HL R P
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 411 MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDN 470
F +I L YLH +I+RD+K N+LID V DFG AK
Sbjct: 143 ARFYA-AQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ + GT YLAPE S + D ++ GV++ E+ G P
Sbjct: 195 ----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 89/227 (39%), Gaps = 25/227 (11%)
Query: 301 FNKSTFTYDELAAATGGFAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGE 356
F K T + A F + LG G FG V HK +G A+K L
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKL 82
Query: 357 REFS---AEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PV 410
++ E I+ V+ LV L +V E+V+ + HL R P
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 411 MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDN 470
F +I L YLH +I+RD+K N+LID V DFG AK
Sbjct: 143 ARFYA-AQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ + GT YLAPE S + D ++ GV++ E+ G P
Sbjct: 195 ----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 89/227 (39%), Gaps = 25/227 (11%)
Query: 301 FNKSTFTYDELAAATGGFAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGE 356
F K T + A F + LG G FG V HK +G A+K L
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKL 82
Query: 357 REFS---AEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PV 410
++ E I+ V+ LV L +V E+V+ + HL R P
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 411 MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDN 470
F +I L YLH +I+RD+K N+LID V DFG AK
Sbjct: 143 ARFYA-AQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ + GT YLAPE S + D ++ GV++ E+ G P
Sbjct: 195 ----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 89/227 (39%), Gaps = 25/227 (11%)
Query: 301 FNKSTFTYDELAAATGGFAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGE 356
F K T + A F + LG G FG V HK +G A+K L
Sbjct: 21 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKL 77
Query: 357 REFS---AEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PV 410
++ E I+ V+ LV L +V E+V+ + HL R P
Sbjct: 78 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH 137
Query: 411 MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDN 470
F +I L YLH +I+RD+K N+LID V DFG AK
Sbjct: 138 ARFYA-AQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 189
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ + GT YLAPE S + D ++ GV++ E+ G P
Sbjct: 190 ----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 89/227 (39%), Gaps = 25/227 (11%)
Query: 301 FNKSTFTYDELAAATGGFAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGE 356
F K T + A F + LG G FG V HK +G A+K L
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKL 82
Query: 357 REFS---AEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PV 410
++ E I+ V+ LV L +V E+V+ + HL R P
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 411 MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDN 470
F +I L YLH +I+RD+K N+LID V DFG AK
Sbjct: 143 ARFYA-AQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ + GT YLAPE S + D ++ GV++ E+ G P
Sbjct: 195 ----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 25/212 (11%)
Query: 318 FAKSNLLGQGGFGYV--HKGVLPNGKEVAVKSLKTGSGQGEREFSA---EVEIISRVHHR 372
+ + LG G +G V K L G E A+K +K S A EV ++ ++ H
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHP 64
Query: 373 HLVSLVGYCIAGGQRMLVYE-FVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLH 431
+++ L + LV E + + + + + +D A ++ L G YLH
Sbjct: 65 NIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS---GTTYLH 121
Query: 432 EDCHPRIIHRDIKAANILIDD-NFEAMV--ADFGLAKLSNDNHTHVSTRV---MGTFGYL 485
+ I+HRD+K N+L++ + +A++ DFGL+ H V ++ +GT Y+
Sbjct: 122 K---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSA-----HFEVGGKMKERLGTAYYI 173
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
APE K EK DV+S GV+L L+ G P
Sbjct: 174 APEVLRK-KYDEKCDVWSCGVILYILLCGYPP 204
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 89/227 (39%), Gaps = 25/227 (11%)
Query: 301 FNKSTFTYDELAAATGGFAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGE 356
F K T + A F + LG G FG V HK +G A+K L
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKL 82
Query: 357 REFS---AEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PV 410
++ E I+ V+ LV L +V E+V+ + HL R P
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 411 MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDN 470
F +I L YLH +I+RD+K N+LID V DFG AK
Sbjct: 143 ARFYA-AQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ + GT YLAPE S + D ++ GV++ E+ G P
Sbjct: 195 ----TWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 44/218 (20%)
Query: 324 LGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGER------EFSAEVEIISRVHHRHLVS 376
LG G F V K G + A K +K + R + EV I+ + H ++++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 377 L------------VGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSA 424
L +G +AGG+ +++F++ K L E +F ++
Sbjct: 79 LHEVYENKTDVILIGELVAGGE---LFDFLAEKE---SLTEEE--ATEFLKQI------L 124
Query: 425 KGLAYLHEDCHPRIIHRDIKAANI-LIDDNF---EAMVADFGLA-KLSNDNHTHVSTRVM 479
G+ YLH +I H D+K NI L+D N + DFGLA K+ N +
Sbjct: 125 NGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIF 178
Query: 480 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
GT ++APE + L ++D++S GV+ L++G P
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
+I+RD+K N+LID VADFG AK + + GT YLAPE S +
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNK 218
Query: 498 KSDVFSFGVMLLELITGRRP 517
D ++ GV++ E+ G P
Sbjct: 219 AVDWWALGVLIYEMAAGYPP 238
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
+I+RD+K N+LID VADFG AK + + GT YLAPE S +
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNK 217
Query: 498 KSDVFSFGVMLLELITGRRP 517
D ++ GV++ E+ G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
+I+RD+K N+LID VADFG AK + + GT YLAPE S +
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNK 217
Query: 498 KSDVFSFGVMLLELITGRRP 517
D ++ GV++ E+ G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 36/175 (20%)
Query: 367 SRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKG 426
S R L + C Q ++ + VS++ L+ L E P+ + A G
Sbjct: 77 SETTDRFLYIALELCNLNLQDLVESKNVSDENLK--LQKEYNPI-------SLLRQIASG 127
Query: 427 LAYLHEDCHPRIIHRDIKAANILID-------------DNFEAMVADFGLAKLSNDNHTH 473
+A+LH +IIHRD+K NIL+ +N +++DFGL K + +
Sbjct: 128 VAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSS 184
Query: 474 VSTRV---MGTFGYLAPE-------YASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
T + GT G+ APE + +LT D+FS G + +++ G+ P
Sbjct: 185 FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
+I+RD+K N+LID VADFG AK + + GT YLAPE S +
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNK 217
Query: 498 KSDVFSFGVMLLELITGRRP 517
D ++ GV++ E+ G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 82/210 (39%), Gaps = 25/210 (11%)
Query: 318 FAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVH 370
F + LG G FG V HK G A+K L ++ E I+ V+
Sbjct: 64 FERIKTLGTGSFGRVMLVKHK---ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 371 HRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PVMDFATRVRIALGSAKGL 427
LV L +V E+V + HL R P F +I L
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA-AQIVLT----F 175
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAP 487
YLH +I+RD+K N+LID V DFG AK + + GT YLAP
Sbjct: 176 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAP 228
Query: 488 EYASSGKLTEKSDVFSFGVMLLELITGRRP 517
E S + D ++ GV++ E+ G P
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 89/227 (39%), Gaps = 25/227 (11%)
Query: 301 FNKSTFTYDELAAATGGFAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGE 356
F K T + A F + LG G FG V HK +G A+K L
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKL 82
Query: 357 REFS---AEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PV 410
++ E I+ V+ LV L +V E+V+ + HL R P
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 411 MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDN 470
F +I L YLH +I+RD+K N++ID V DFG AK
Sbjct: 143 ARFYA-AQIVLT----FEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR 194
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ + GT YLAPE S + D ++ GV++ E+ G P
Sbjct: 195 ----TWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 82/210 (39%), Gaps = 25/210 (11%)
Query: 318 FAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVH 370
F + LG G FG V HK G A+K L ++ E I+ V+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHK---ETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 371 HRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PVMDFATRVRIALGSAKGL 427
LV L +V E+V + HL R P F +I L
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA-AQIVLT----F 154
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAP 487
YLH +I+RD+K N+LID V DFG AK + + GT YLAP
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAP 207
Query: 488 EYASSGKLTEKSDVFSFGVMLLELITGRRP 517
E S + D ++ GV++ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 82/207 (39%), Gaps = 19/207 (9%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVHHRH 373
F + LG G FG V + G A+K L ++ E I+ V+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PVMDFATRVRIALGSAKGLAYL 430
LV L +V E+V+ + HL R P F +I L YL
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA-AQIVLT----FEYL 157
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYA 490
H +I+RD+K N+LID V DFG AK + + GT YLAPE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEII 210
Query: 491 SSGKLTEKSDVFSFGVMLLELITGRRP 517
S + D ++ GV++ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 82/210 (39%), Gaps = 25/210 (11%)
Query: 318 FAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVH 370
F + LG G FG V HK G A+K L ++ E I+ V+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHK---ETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 371 HRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PVMDFATRVRIALGSAKGL 427
LV L +V E+V + HL R P F +I L
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA-AQIVLT----F 154
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAP 487
YLH +I+RD+K N+LID V DFG AK + + GT YLAP
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAP 207
Query: 488 EYASSGKLTEKSDVFSFGVMLLELITGRRP 517
E S + D ++ GV++ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 82/210 (39%), Gaps = 25/210 (11%)
Query: 318 FAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVH 370
F + LG G FG V HK G A+K L ++ E I+ V+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHK---ETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 371 HRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PVMDFATRVRIALGSAKGL 427
LV L +V E+V + HL R P F +I L
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA-AQIVLT----F 154
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAP 487
YLH +I+RD+K N+LID V DFG AK + + GT YLAP
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAP 207
Query: 488 EYASSGKLTEKSDVFSFGVMLLELITGRRP 517
E S + D ++ GV++ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 32/171 (18%)
Query: 367 SRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKG 426
S R L + C Q ++ + VS++ L+ L E P+ + A G
Sbjct: 95 SETTDRFLYIALELCNLNLQDLVESKNVSDENLK--LQKEYNPI-------SLLRQIASG 145
Query: 427 LAYLHEDCHPRIIHRDIKAANILID-------------DNFEAMVADFGLAKLSNDNHTH 473
+A+LH +IIHRD+K NIL+ +N +++DFGL K +
Sbjct: 146 VAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 474 VSTRV---MGTFGYLAPEY---ASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
+ GT G+ APE ++ +LT D+FS G + +++ G+ P
Sbjct: 203 FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 82/210 (39%), Gaps = 25/210 (11%)
Query: 318 FAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVH 370
F + LG G FG V HK G A+K L ++ E I+ V+
Sbjct: 44 FERIKTLGTGSFGRVMLVKHK---ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 371 HRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PVMDFATRVRIALGSAKGL 427
LV L +V E+V + HL R P F +I L
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA-AQIVLT----F 155
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAP 487
YLH +I+RD+K N+LID V DFG AK + + GT YLAP
Sbjct: 156 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAP 208
Query: 488 EYASSGKLTEKSDVFSFGVMLLELITGRRP 517
E S + D ++ GV++ E+ G P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 82/210 (39%), Gaps = 25/210 (11%)
Query: 318 FAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVH 370
F + LG G FG V HK G A+K L ++ E I+ V+
Sbjct: 44 FERIKTLGTGSFGRVMLVKHK---ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 371 HRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PVMDFATRVRIALGSAKGL 427
LV L +V E+V + HL R P F +I L
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA-AQIVLT----F 155
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAP 487
YLH +I+RD+K N+LID V DFG AK + + GT YLAP
Sbjct: 156 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAP 208
Query: 488 EYASSGKLTEKSDVFSFGVMLLELITGRRP 517
E S + D ++ GV++ E+ G P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 82/210 (39%), Gaps = 25/210 (11%)
Query: 318 FAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVH 370
F + LG G FG V HK G A+K L ++ E I+ V+
Sbjct: 36 FERIKTLGTGSFGRVMLVKHK---ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 371 HRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PVMDFATRVRIALGSAKGL 427
LV L +V E+V + HL R P F +I L
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA-AQIVLT----F 147
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAP 487
YLH +I+RD+K N+LID V DFG AK + + GT YLAP
Sbjct: 148 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAP 200
Query: 488 EYASSGKLTEKSDVFSFGVMLLELITGRRP 517
E S + D ++ GV++ E+ G P
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 32/171 (18%)
Query: 367 SRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKG 426
S R L + C Q ++ + VS++ L+ L E P+ + A G
Sbjct: 95 SETTDRFLYIALELCNLNLQDLVESKNVSDENLK--LQKEYNPI-------SLLRQIASG 145
Query: 427 LAYLHEDCHPRIIHRDIKAANILID-------------DNFEAMVADFGLAKLSNDNHTH 473
+A+LH +IIHRD+K NIL+ +N +++DFGL K +
Sbjct: 146 VAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 474 VSTRV---MGTFGYLAPEY---ASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
+ GT G+ APE ++ +LT D+FS G + +++ G+ P
Sbjct: 203 FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 82/210 (39%), Gaps = 25/210 (11%)
Query: 318 FAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVH 370
F + LG G FG V HK G A+K L ++ E I+ V+
Sbjct: 36 FERIKTLGTGSFGRVMLVKHK---ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 371 HRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PVMDFATRVRIALGSAKGL 427
LV L +V E+V + HL R P F +I L
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYA-AQIVLT----F 147
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAP 487
YLH +I+RD+K N+LID V DFG AK + + GT YLAP
Sbjct: 148 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAP 200
Query: 488 EYASSGKLTEKSDVFSFGVMLLELITGRRP 517
E S + D ++ GV++ E+ G P
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 82/210 (39%), Gaps = 25/210 (11%)
Query: 318 FAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVH 370
F + LG G FG V HK G A+K L ++ E I+ V+
Sbjct: 44 FERIKTLGTGSFGRVMLVKHK---ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 371 HRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PVMDFATRVRIALGSAKGL 427
LV L +V E+V + HL R P F +I L
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA-AQIVLT----F 155
Query: 428 AYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAP 487
YLH +I+RD+K N+LID V DFG AK + + GT YLAP
Sbjct: 156 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAP 208
Query: 488 EYASSGKLTEKSDVFSFGVMLLELITGRRP 517
E S + D ++ GV++ E+ G P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
+I+RD+K N++ID V DFGLAK + + GT YLAPE S +
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR----TWXLCGTPEYLAPEIILSKGYNK 217
Query: 498 KSDVFSFGVMLLELITGRRP 517
D ++ GV++ E+ G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 324 LGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGER------EFSAEVEIISRVHHRHLVS 376
LG G F V K G + A K +K + R + EV I+ + H ++++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
L +L+ E V+ L L + + AT + G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH---SL 133
Query: 437 RIIHRDIKAANI-LIDDNF---EAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYAS 491
+I H D+K NI L+D N + DFGLA K+ N + GT ++APE +
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPAFVAPEIVN 190
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRP 517
L ++D++S GV+ L++G P
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 89/227 (39%), Gaps = 25/227 (11%)
Query: 301 FNKSTFTYDELAAATGGFAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGE 356
F K T + A F + LG G FG V HK +G A+K L
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKL 82
Query: 357 REFS---AEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PV 410
++ E I+ V+ LV L +V E+V+ + HL R P
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 411 MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDN 470
F +I L YLH +I+RD+K N+LID V DFG AK
Sbjct: 143 ARFYA-AQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ + GT YLAPE S + D ++ GV++ ++ G P
Sbjct: 195 ----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSL---KTGSGQGER-----EFSAEVEIISR 368
+ S LG G G V K+VA+K + K G E+EI+ +
Sbjct: 18 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 77
Query: 369 VHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLA 428
++H ++ + + +V E + L + G R + AT +
Sbjct: 78 LNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLAVQ 134
Query: 429 YLHEDCHPRIIHRDIKAANILIDDNFE---AMVADFGLAKLSNDNHTHVSTRVMGTFGYL 485
YLHE+ IIHRD+K N+L+ E + DFG +K+ + T + + GT YL
Sbjct: 135 YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYL 189
Query: 486 APEYASS---GKLTEKSDVFSFGVMLLELITGRRP 517
APE S D +S GV+L ++G P
Sbjct: 190 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSL---KTGSGQGER-----EFSAEVEIISR 368
+ S LG G G V K+VA+K + K G E+EI+ +
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 369 VHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLA 428
++H ++ + + +V E + L + G R + AT +
Sbjct: 72 LNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLAVQ 128
Query: 429 YLHEDCHPRIIHRDIKAANILIDDNFE---AMVADFGLAKLSNDNHTHVSTRVMGTFGYL 485
YLHE+ IIHRD+K N+L+ E + DFG +K+ + T + + GT YL
Sbjct: 129 YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYL 183
Query: 486 APEYASS---GKLTEKSDVFSFGVMLLELITGRRP 517
APE S D +S GV+L ++G P
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSL---KTGSGQGER-----EFSAEVEIISR 368
+ S LG G G V K+VA+K + K G E+EI+ +
Sbjct: 11 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 70
Query: 369 VHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLA 428
++H ++ + + +V E + L + G R + AT +
Sbjct: 71 LNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLAVQ 127
Query: 429 YLHEDCHPRIIHRDIKAANILIDDNFE---AMVADFGLAKLSNDNHTHVSTRVMGTFGYL 485
YLHE+ IIHRD+K N+L+ E + DFG +K+ + T + + GT YL
Sbjct: 128 YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYL 182
Query: 486 APEYASS---GKLTEKSDVFSFGVMLLELITGRRP 517
APE S D +S GV+L ++G P
Sbjct: 183 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 81/207 (39%), Gaps = 19/207 (9%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVHHRH 373
F + LG G FG V + G A+K L ++ E I+ V+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PVMDFATRVRIALGSAKGLAYL 430
LV L +V E+V + HL R P F +I L YL
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA-AQIVLT----FEYL 157
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYA 490
H +I+RD+K N+LID V DFG AK + + GT YLAPE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEII 210
Query: 491 SSGKLTEKSDVFSFGVMLLELITGRRP 517
S + D ++ GV++ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 81/207 (39%), Gaps = 19/207 (9%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVHHRH 373
F + LG G FG V + G A+K L ++ E I+ V+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PVMDFATRVRIALGSAKGLAYL 430
LV L +V E+V + HL R P F +I L YL
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYA-AQIVLT----FEYL 157
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYA 490
H +I+RD+K N+LID V DFG AK + + GT YLAPE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEII 210
Query: 491 SSGKLTEKSDVFSFGVMLLELITGRRP 517
S + D ++ GV++ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 324 LGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGER------EFSAEVEIISRVHHRHLVS 376
LG G F V K G + A K +K + R + EV I+ + H ++++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
L +L+ E V+ L L + + AT + G+ YLH
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH---SL 132
Query: 437 RIIHRDIKAANI-LIDDNF---EAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYAS 491
+I H D+K NI L+D N + DFGLA K+ N + GT ++APE +
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVN 189
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRP 517
L ++D++S GV+ L++G P
Sbjct: 190 YEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 324 LGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGER------EFSAEVEIISRVHHRHLVS 376
LG G F V K G + A K +K + R + EV I+ + H ++++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
L +L+ E V+ L L + + AT + G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH---SL 133
Query: 437 RIIHRDIKAANI-LIDDNF---EAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYAS 491
+I H D+K NI L+D N + DFGLA K+ N + GT ++APE +
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVN 190
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRP 517
L ++D++S GV+ L++G P
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 81/207 (39%), Gaps = 19/207 (9%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVHHRH 373
F + LG G FG V + G A+K L ++ E I+ V+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PVMDFATRVRIALGSAKGLAYL 430
LV L +V E+V + HL R P F +I L YL
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA-AQIVLT----FEYL 157
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYA 490
H +I+RD+K N+LID V DFG AK + + GT YLAPE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEII 210
Query: 491 SSGKLTEKSDVFSFGVMLLELITGRRP 517
S + D ++ GV++ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 81/207 (39%), Gaps = 19/207 (9%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVHHRH 373
F + LG G FG V + G A+K L ++ E I+ V+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PVMDFATRVRIALGSAKGLAYL 430
LV L +V E+V + HL R P F +I L YL
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYA-AQIVLT----FEYL 157
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYA 490
H +I+RD+K N+LID V DFG AK + + GT YLAPE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEII 210
Query: 491 SSGKLTEKSDVFSFGVMLLELITGRRP 517
S + D ++ GV++ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 85/201 (42%), Gaps = 18/201 (8%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCI 382
LG+G FG VH+ G + AVK ++ + E E+ + + +V L G
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-----ELVACAGLSSPRIVPLYGAVR 134
Query: 383 AGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSA-KGLAYLHEDCHPRIIHR 441
G + E + +L + D R LG A +GL YLH RI+H
Sbjct: 135 EGPWVNIFMELLEGGSLGQLIKQMGCLPED---RALYYLGQALEGLEYLHTR---RILHG 188
Query: 442 DIKAANILID-DNFEAMVADFGLAKLSNDNHTHVSTR----VMGTFGYLAPEYASSGKLT 496
D+KA N+L+ D A + DFG A + S + GT ++APE
Sbjct: 189 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 248
Query: 497 EKSDVFSFGVMLLELITGRRP 517
K D++S M+L ++ G P
Sbjct: 249 AKVDIWSSCCMMLHMLNGCHP 269
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 81/207 (39%), Gaps = 19/207 (9%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVHHRH 373
F + LG G FG V + G A+K L ++ E I+ V+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PVMDFATRVRIALGSAKGLAYL 430
LV L +V E+V + HL R P F +I L YL
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA-AQIVLT----FEYL 157
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYA 490
H +I+RD+K N+LID V DFG AK + + GT YLAPE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEII 210
Query: 491 SSGKLTEKSDVFSFGVMLLELITGRRP 517
S + D ++ GV++ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 81/207 (39%), Gaps = 19/207 (9%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVHHRH 373
F + LG G FG V + G A+K L ++ E I+ V+
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PVMDFATRVRIALGSAKGLAYL 430
LV L +V E+V + HL R P F +I L YL
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA-AQIVLT----FEYL 158
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYA 490
H +I+RD+K N+LID V DFG AK + + GT YLAPE
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEII 211
Query: 491 SSGKLTEKSDVFSFGVMLLELITGRRP 517
S + D ++ GV++ E+ G P
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSL---KTGSGQGER-----EFSAEVEIISR 368
+ S LG G G V K+VA+K + K G E+EI+ +
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 369 VHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLA 428
++H ++ + + +V E + L + G R + AT +
Sbjct: 72 LNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLAVQ 128
Query: 429 YLHEDCHPRIIHRDIKAANILIDDNFE---AMVADFGLAKLSNDNHTHVSTRVMGTFGYL 485
YLHE+ IIHRD+K N+L+ E + DFG +K+ + T + + GT YL
Sbjct: 129 YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYL 183
Query: 486 APEYASS---GKLTEKSDVFSFGVMLLELITGRRP 517
APE S D +S GV+L ++G P
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 81/207 (39%), Gaps = 19/207 (9%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVHHRH 373
F + LG G FG V + G A+K L ++ E I+ V+
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PVMDFATRVRIALGSAKGLAYL 430
LV L +V E+V + HL R P F +I L YL
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYA-AQIVLT----FEYL 158
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYA 490
H +I+RD+K N+LID V DFG AK + + GT YLAPE
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEII 211
Query: 491 SSGKLTEKSDVFSFGVMLLELITGRRP 517
S + D ++ GV++ E+ G P
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 324 LGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGER------EFSAEVEIISRVHHRHLVS 376
LG G F V K G + A K +K + R + EV I+ + H ++++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
L +L+ E V+ L L + + AT + G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH---SL 133
Query: 437 RIIHRDIKAANI-LIDDNF---EAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYAS 491
+I H D+K NI L+D N + DFGLA K+ N + GT ++APE +
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVN 190
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRP 517
L ++D++S GV+ L++G P
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
+I+RD+K N++ID V DFGLAK + + GT YLAPE S +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR----TWXLCGTPEYLAPEIILSKGYNK 217
Query: 498 KSDVFSFGVMLLELITGRRP 517
D ++ GV++ E+ G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 23/215 (10%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSL---KTGSGQGER-----EFSAEVEIISR 368
+ S LG G G V K+VA+K + K G E+EI+ +
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 369 VHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLA 428
++H ++ + + +V E + L + G R + AT +
Sbjct: 72 LNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLAVQ 128
Query: 429 YLHEDCHPRIIHRDIKAANILIDDNFE---AMVADFGLAKLSNDNHTHVSTRVMGTFGYL 485
YLHE+ IIHRD+K N+L+ E + DFG +K+ + T + + GT YL
Sbjct: 129 YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYL 183
Query: 486 APEYASS---GKLTEKSDVFSFGVMLLELITGRRP 517
APE S D +S GV+L ++G P
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 324 LGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGER------EFSAEVEIISRVHHRHLVS 376
LG G F V K G + A K +K + R + EV I+ + H ++++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
L +L+ E V+ L L + + AT + G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH---SL 133
Query: 437 RIIHRDIKAANI-LIDDNF---EAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYAS 491
+I H D+K NI L+D N + DFGLA K+ N + GT ++APE +
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVN 190
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRP 517
L ++D++S GV+ L++G P
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 324 LGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGER------EFSAEVEIISRVHHRHLVS 376
LG G F V K G + A K +K + R + EV I+ + H ++++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
L +L+ E V+ L L + + AT + G+ YLH
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH---SL 132
Query: 437 RIIHRDIKAANI-LIDDNF---EAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYAS 491
+I H D+K NI L+D N + DFGLA K+ N + GT ++APE +
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVN 189
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRP 517
L ++D++S GV+ L++G P
Sbjct: 190 YEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 81/207 (39%), Gaps = 19/207 (9%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVHHRH 373
F + LG G FG V + G A+K L ++ E I+ V+
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PVMDFATRVRIALGSAKGLAYL 430
LV L +V E+V + HL R P F +I L YL
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA-AQIVLT----FEYL 158
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYA 490
H +I+RD+K N+LID V DFG AK + + GT YLAPE
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPEII 211
Query: 491 SSGKLTEKSDVFSFGVMLLELITGRRP 517
S + D ++ GV++ E+ G P
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 14/164 (8%)
Query: 360 SAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRI 419
E+EI+ +++H ++ + + +V E + L + G R + AT
Sbjct: 188 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLY 244
Query: 420 ALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAM---VADFGLAKLSNDNHTHVST 476
+ YLHE+ IIHRD+K N+L+ E + DFG +K+ + T +
Sbjct: 245 FYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMR 299
Query: 477 RVMGTFGYLAPEYASS---GKLTEKSDVFSFGVMLLELITGRRP 517
+ GT YLAPE S D +S GV+L ++G P
Sbjct: 300 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 91/225 (40%), Gaps = 28/225 (12%)
Query: 310 ELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGE-----------RE 358
EL A + + G +G V GV G VA+K + G +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 359 FSAEVEIISRVHHRHLVSLVGYCI-----AGGQRMLVYEFVSNKTLEYHLHGENRPVMDF 413
E+ +++ HH +++ L + A + LV E + L +H + R V+
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTD-LAQVIHDQ-RIVISP 133
Query: 414 ATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK--LSNDNH 471
GL LHE ++HRD+ NIL+ DN + + DF LA+ ++ N
Sbjct: 134 QHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK 190
Query: 472 THVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
TH T Y APE K T+ D++S G ++ E+ +
Sbjct: 191 THYVTHR----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 81/207 (39%), Gaps = 19/207 (9%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFS---AEVEIISRVHHRH 373
F + LG G FG V + G A+K L ++ E I+ V+
Sbjct: 29 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 88
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PVMDFATRVRIALGSAKGLAYL 430
LV L +V E+V + HL R P F +I L YL
Sbjct: 89 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA-AQIVLT----FEYL 143
Query: 431 HEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYA 490
H +I+RD+K N+LID V DFG AK + + GT YLAPE
Sbjct: 144 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPEII 196
Query: 491 SSGKLTEKSDVFSFGVMLLELITGRRP 517
S + D ++ GV++ E+ G P
Sbjct: 197 LSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 421 LGSA-KGLAYLHEDCHPRIIHRDIKAANILID-DNFEAMVADFGLAKLSNDNHTHVSTR- 477
LG A +GL YLH RI+H D+KA N+L+ D A + DFG A + S
Sbjct: 156 LGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 212
Query: 478 ---VMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ GT ++APE K D++S M+L ++ G P
Sbjct: 213 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 91/225 (40%), Gaps = 28/225 (12%)
Query: 310 ELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGE-----------RE 358
EL A + + G +G V GV G VA+K + G +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 359 FSAEVEIISRVHHRHLVSLVGYCI-----AGGQRMLVYEFVSNKTLEYHLHGENRPVMDF 413
E+ +++ HH +++ L + A + LV E + L +H + R V+
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTD-LAQVIH-DQRIVISP 133
Query: 414 ATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK--LSNDNH 471
GL LHE ++HRD+ NIL+ DN + + DF LA+ ++ N
Sbjct: 134 QHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK 190
Query: 472 THVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 515
TH T Y APE K T+ D++S G ++ E+ +
Sbjct: 191 THYVTHR----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 421 LGSA-KGLAYLHEDCHPRIIHRDIKAANILID-DNFEAMVADFGLAKLSNDNHTHVSTR- 477
LG A +GL YLH RI+H D+KA N+L+ D A + DFG A + S
Sbjct: 172 LGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 228
Query: 478 ---VMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ GT ++APE K D++S M+L ++ G P
Sbjct: 229 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 324 LGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGER------EFSAEVEIISRVHHRHLVS 376
LG G F V K G + A K +K + R + EV I+ + H ++++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
L +L+ E V+ L L + + AT + G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH---SL 133
Query: 437 RIIHRDIKAANI-LIDDNF---EAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYAS 491
+I H D+K NI L+D N + DFGLA K+ N + GT ++APE +
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVN 190
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRP 517
L ++D++S GV+ L++G P
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 324 LGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGER------EFSAEVEIISRVHHRHLVS 376
LG G F V K G + A K +K + R + EV I+ + H ++++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
L +L+ E V+ L L + + AT + G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH---SL 133
Query: 437 RIIHRDIKAANI-LIDDNF---EAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYAS 491
+I H D+K NI L+D N + DFGLA K+ N + GT ++APE +
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVN 190
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRP 517
L ++D++S GV+ L++G P
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 14/163 (8%)
Query: 361 AEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIA 420
E+EI+ +++H ++ + + +V E + L + G R + AT
Sbjct: 203 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYF 259
Query: 421 LGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFE---AMVADFGLAKLSNDNHTHVSTR 477
+ YLHE+ IIHRD+K N+L+ E + DFG +K+ + T +
Sbjct: 260 YQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRT 314
Query: 478 VMGTFGYLAPEYASS---GKLTEKSDVFSFGVMLLELITGRRP 517
+ GT YLAPE S D +S GV+L ++G P
Sbjct: 315 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 357
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 324 LGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGER------EFSAEVEIISRVHHRHLVS 376
LG G F V K G + A K +K + R + EV I+ + H ++++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
L +L+ E V+ L L + + AT + G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH---SL 133
Query: 437 RIIHRDIKAANI-LIDDNF---EAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYAS 491
+I H D+K NI L+D N + DFGLA K+ N + GT ++APE +
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVN 190
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRP 517
L ++D++S GV+ L++G P
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
IIHRD+K +NI++ + + DFGLA+ + + V V T Y APE E
Sbjct: 149 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVV--TRYYRAPEVILGMGYKE 206
Query: 498 KSDVFSFGVMLLELITG 514
D++S G ++ E+I G
Sbjct: 207 NVDIWSVGCIMGEMIKG 223
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 34/209 (16%)
Query: 324 LGQGGFGYVHKGVLPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVSLVGYCIA 383
LG+G FG VH+ V + K+ + G + E+ I++ HR+++ L +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 384 GGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIA---LGSAKGLAYLHEDCHP---- 436
+ ++++EF+S +D R+ + L + ++Y+H+ C
Sbjct: 73 MEELVMIFEFISG--------------LDIFERINTSAFELNEREIVSYVHQVCEALQFL 118
Query: 437 ---RIIHRDIKAANILIDDNFEAMVA--DFGLAKLSN--DNHTHVSTRVMGTF-GYLAPE 488
I H DI+ NI+ + + +FG A+ DN R++ T Y APE
Sbjct: 119 HSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF-----RLLFTAPEYYAPE 173
Query: 489 YASSGKLTEKSDVFSFGVMLLELITGRRP 517
++ +D++S G ++ L++G P
Sbjct: 174 VHQHDVVSTATDMWSLGTLVYVLLSGINP 202
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 324 LGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGER------EFSAEVEIISRVHHRHLVS 376
LG G F V K G + A K +K + R + EV I+ + H ++++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
L +L+ E V+ L L + + AT + G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH---SL 133
Query: 437 RIIHRDIKAANI-LIDDNF---EAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYAS 491
+I H D+K NI L+D N + DFGLA K+ N + GT ++APE +
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVN 190
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRP 517
L ++D++S GV+ L++G P
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 324 LGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGER------EFSAEVEIISRVHHRHLVS 376
LG G F V K G + A K +K + R + EV I+ + H ++++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
L +L+ E V+ L L + + AT + G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH---SL 133
Query: 437 RIIHRDIKAANI-LIDDNF---EAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYAS 491
+I H D+K NI L+D N + DFGLA K+ N + GT ++APE +
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVN 190
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRP 517
L ++D++S GV+ L++G P
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 324 LGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGER------EFSAEVEIISRVHHRHLVS 376
LG G F V K G + A K +K + R + EV I+ + H ++++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
L +L+ E V+ L L + + AT + G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH---SL 133
Query: 437 RIIHRDIKAANI-LIDDNF---EAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYAS 491
+I H D+K NI L+D N + DFGLA K+ N + GT ++APE +
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVN 190
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRP 517
L ++D++S GV+ L++G P
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
IIHRD+K +NI++ + + DFGLA+ + + + T + T Y APE E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 498 KSDVFSFGVMLLELITG 514
D++S GV++ E+I G
Sbjct: 205 NVDIWSVGVIMGEMIKG 221
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 324 LGQGGFGYVHKG-VLPNGKEVAVKSLKTGSGQGER------EFSAEVEIISRVHHRHLVS 376
LG G F V K G + A K +K + R + EV I+ + H ++++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 377 LVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHP 436
L +L+ E V+ L L + + AT + G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH---SL 133
Query: 437 RIIHRDIKAANI-LIDDNF---EAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYAS 491
+I H D+K NI L+D N + DFGLA K+ N + GT ++APE +
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVN 190
Query: 492 SGKLTEKSDVFSFGVMLLELITGRRP 517
L ++D++S GV+ L++G P
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 21/211 (9%)
Query: 318 FAKSNLLGQGGFGYVHKGVLPN-GKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRHLVS 376
F + GQG FG V G + G VA+K + RE ++ ++ +HH ++V
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQI-MQDLAVLHHPNIVQ 83
Query: 377 LVGYCIAGGQR-------MLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGS-AKGLA 428
L Y G+R +V E+V + + R V +++ L + +
Sbjct: 84 LQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIG 143
Query: 429 YLHEDCHPRIIHRDIKAANILIDDNFEAM-VADFGLAKL---SNDNHTHVSTRVMGTFGY 484
LH + HRDIK N+L+++ + + DFG AK S N ++ +R Y
Sbjct: 144 CLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY-----Y 197
Query: 485 LAPEYASSGK-LTEKSDVFSFGVMLLELITG 514
APE + T D++S G + E++ G
Sbjct: 198 RAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
IIHRD+K +NI++ + + DFGLA+ + + + T + T Y APE E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 498 KSDVFSFGVMLLELITG 514
D++S GV++ E+I G
Sbjct: 205 NVDIWSVGVIMGEMIKG 221
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 33/223 (14%)
Query: 318 FAKSNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGERE-FSAEVEIISRVHHRHLV 375
F LG+GGFG V + + A+K ++ + + RE EV+ ++++ H +V
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 376 SLVGYCI---------AGGQRMLVY---EFVSNKTLEYHLHGENRPVMDFATR---VRIA 420
+ ++ +Y + + L+ ++G R ++ R + I
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNG--RCTIEERERSVCLHIF 124
Query: 421 LGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVS----- 475
L A+ + +LH ++HRD+K +NI + V DFGL + + +
Sbjct: 125 LQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181
Query: 476 ------TRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELI 512
T +GT Y++PE + K D+FS G++L EL+
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYASS---- 492
IHRD+K N+L+D + +ADFG K++ + T V GT Y++PE S
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGD 252
Query: 493 GKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLV 528
G + D +S GV L E++ G P DSLV
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTP----FYADSLV 284
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
+I+RD+K N++ID V DFG AK + + GT YLAPE S +
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNK 217
Query: 498 KSDVFSFGVMLLELITGRRP 517
D ++ GV++ E+ G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYASS---- 492
IHRD+K N+L+D + +ADFG K++ + T V GT Y++PE S
Sbjct: 189 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGD 247
Query: 493 GKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLV 528
G + D +S GV L E++ G P DSLV
Sbjct: 248 GYYGRECDWWSVGVFLYEMLVGDTP----FYADSLV 279
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 88/227 (38%), Gaps = 25/227 (11%)
Query: 301 FNKSTFTYDELAAATGGFAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGE 356
F K T + A F + LG G FG V HK +G A+K L
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKL 82
Query: 357 REFS---AEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PV 410
++ E I+ V+ LV L +V E+V+ + HL R P
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 411 MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDN 470
F +I L YLH +I+RD+K N+LID V DFG AK
Sbjct: 143 ARFYA-AQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ + GT YLAP S + D ++ GV++ E+ G P
Sbjct: 195 ----TWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLA-KLSNDNHTHVSTRVMGTFGYLAPEYASS---- 492
IHRD+K N+L+D + +ADFG K++ + T V GT Y++PE S
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGD 252
Query: 493 GKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLV 528
G + D +S GV L E++ G P DSLV
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTP----FYADSLV 284
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 35/225 (15%)
Query: 304 STFT----YDELAAATGGFAKSNLLGQGGFGYVHKGVLPNGKEVAVKSLK---TGSGQGE 356
STFT Y +L G QG VL G VAVK L +
Sbjct: 18 STFTVLKRYQQLKPIGSG-------AQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAK 68
Query: 357 REFSAEVEIISRVHHRHLVSLVGYCIAGGQRML-----VYEFVS--NKTLEYHLHGENRP 409
R + E+ ++ V+H++++SL+ + Q+ L VY + + L +H E
Sbjct: 69 RAYR-ELVLLKCVNHKNIISLLN--VFTPQKTLEEFQDVYLVMELMDANLCQVIHME--- 122
Query: 410 VMDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSND 469
+D + G+ +LH IIHRD+K +NI++ + + DFGLA+ +
Sbjct: 123 -LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTACT 178
Query: 470 NHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITG 514
N + T + T Y APE D++S G ++ EL+ G
Sbjct: 179 N--FMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
+I+RD+K N++ID V DFG AK + + GT YLAPE S +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNK 218
Query: 498 KSDVFSFGVMLLELITGRRP 517
D ++ GV++ E+ G P
Sbjct: 219 AVDWWALGVLIYEMAAGYPP 238
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
+I+RD+K N++ID V DFG AK + + GT YLAPE S +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNK 218
Query: 498 KSDVFSFGVMLLELITGRRP 517
D ++ GV++ E+ G P
Sbjct: 219 AVDWWALGVLIYEMAAGYPP 238
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 36/218 (16%)
Query: 324 LGQGGFGYVHKGV-LPNGK-EVAVKSLKTGSGQGEREFSAEVEIISRVHHRH------LV 375
LG+G FG V + + GK +VA+K ++ G+ E+ ++ ++ + V
Sbjct: 27 LGEGTFGKVVECLDHARGKSQVALKIIR-NVGKYREAARLEINVLKKIKEKDKENKFLCV 85
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
+ + G + +E + T E+ +P R +A L +LHE+
Sbjct: 86 LMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVR-HMAYQLCHALRFLHEN-- 142
Query: 436 PRIIHRDIKAANIL-IDDNFEAM------------------VADFGLAKLSNDNHTHVST 476
++ H D+K NIL ++ FE + VADFG A +++H T
Sbjct: 143 -QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH----T 197
Query: 477 RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITG 514
++ T Y PE + DV+S G +L E G
Sbjct: 198 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 235
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
+I+RD+K N++ID V DFG AK + + GT YLAPE S +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNK 217
Query: 498 KSDVFSFGVMLLELITGRRP 517
D ++ GV++ E+ G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
+I+RD+K N++ID V DFG AK + + GT YLAPE S +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNK 217
Query: 498 KSDVFSFGVMLLELITGRRP 517
D ++ GV++ E+ G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
+I+RD+K N++ID V DFG AK + + GT YLAPE S +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNK 218
Query: 498 KSDVFSFGVMLLELITGRRP 517
D ++ GV++ E+ G P
Sbjct: 219 AVDWWALGVLIYEMAAGYPP 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
+I+RD+K N++ID V DFG AK + + GT YLAPE S +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNK 218
Query: 498 KSDVFSFGVMLLELITGRRP 517
D ++ GV++ E+ G P
Sbjct: 219 AVDWWALGVLIYEMAAGYPP 238
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 16/202 (7%)
Query: 324 LGQGGFGYVHKGVLPNGKE-VAVKSLKTGSGQGEREFSAEVEIIS--RVHHRHLVSLVGY 380
+G G FG KE VAVK ++ G+ E + + EII+ + H ++V
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDE---NVQREIINHRSLRHPNIVRFKEV 84
Query: 381 CIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPRIIH 440
+ ++ E+ S L + R D A L S G++Y H +I H
Sbjct: 85 ILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLS--GVSYCHS---MQICH 139
Query: 441 RDIKAANILIDDN--FEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEK 498
RD+K N L+D + + DFG +K S + ST +GT Y+APE + K
Sbjct: 140 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLRQEYDGK 197
Query: 499 -SDVFSFGVMLLELITGRRPVD 519
+DV+S GV L ++ G P +
Sbjct: 198 IADVWSCGVTLYVMLVGAYPFE 219
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
IIHRD+K +NI++ + + DFGLA+ + + + T + T Y APE E
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKE 205
Query: 498 KSDVFSFGVMLLELITG 514
D++S G ++ E+I G
Sbjct: 206 NVDIWSVGCIMGEMIKG 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
IIHRD+K +NI++ + + DFGLA+ + + + T + T Y APE E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 498 KSDVFSFGVMLLELITG 514
D++S G ++ E+I G
Sbjct: 205 NVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
IIHRD+K +NI++ + + DFGLA+ + + + T + T Y APE E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 498 KSDVFSFGVMLLELITG 514
D++S G ++ E+I G
Sbjct: 205 NVDIWSVGCIMGEMIKG 221
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 36/218 (16%)
Query: 324 LGQGGFGYVHKGV-LPNGK-EVAVKSLKTGSGQGEREFSAEVEIISRVHHRH------LV 375
LG+G FG V + + GK +VA+K ++ G+ E+ ++ ++ + V
Sbjct: 36 LGEGTFGKVVECLDHARGKSQVALKIIR-NVGKYREAARLEINVLKKIKEKDKENKFLCV 94
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
+ + G + +E + T E+ +P R +A L +LHE+
Sbjct: 95 LMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVR-HMAYQLCHALRFLHEN-- 151
Query: 436 PRIIHRDIKAANIL-IDDNFEAM------------------VADFGLAKLSNDNHTHVST 476
++ H D+K NIL ++ FE + VADFG A +++H T
Sbjct: 152 -QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH----T 206
Query: 477 RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITG 514
++ T Y PE + DV+S G +L E G
Sbjct: 207 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 244
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
IIHRD+K +NI++ + + DFGLA+ + + + T + T Y APE E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 498 KSDVFSFGVMLLELITG 514
D++S G ++ E+I G
Sbjct: 205 NVDIWSVGCIMGEMIKG 221
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 36/218 (16%)
Query: 324 LGQGGFGYVHKGV-LPNGK-EVAVKSLKTGSGQGEREFSAEVEIISRVHHRH------LV 375
LG+G FG V + + GK +VA+K ++ G+ E+ ++ ++ + V
Sbjct: 59 LGEGTFGKVVECLDHARGKSQVALKIIR-NVGKYREAARLEINVLKKIKEKDKENKFLCV 117
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
+ + G + +E + T E+ +P R +A L +LHE+
Sbjct: 118 LMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVR-HMAYQLCHALRFLHEN-- 174
Query: 436 PRIIHRDIKAANIL-IDDNFEAM------------------VADFGLAKLSNDNHTHVST 476
++ H D+K NIL ++ FE + VADFG A +++H T
Sbjct: 175 -QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH----T 229
Query: 477 RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITG 514
++ T Y PE + DV+S G +L E G
Sbjct: 230 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 267
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 36/175 (20%)
Query: 367 SRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKG 426
S R L + C Q ++ + VS++ L+ L E P+ + A G
Sbjct: 77 SETTDRFLYIALELCNLNLQDLVESKNVSDENLK--LQKEYNPI-------SLLRQIASG 127
Query: 427 LAYLHEDCHPRIIHRDIKAANILID-------------DNFEAMVADFGLAKLSNDNHTH 473
+A+LH +IIHRD+K NIL+ +N +++DFGL K +
Sbjct: 128 VAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 184
Query: 474 VSTRV---MGTFGYLAPE-------YASSGKLTEKSDVFSFGVMLLELIT-GRRP 517
+ GT G+ APE + +LT D+FS G + +++ G+ P
Sbjct: 185 FRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
IIHRD+K +NI++ + + DFGLA+ + + + T + T Y APE E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPEVVTRYYRAPEVILGMGYKE 204
Query: 498 KSDVFSFGVMLLELITG 514
D++S G ++ E+I G
Sbjct: 205 NVDIWSVGCIMGEMIKG 221
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 88/227 (38%), Gaps = 25/227 (11%)
Query: 301 FNKSTFTYDELAAATGGFAKSNLLGQGGFGYV----HKGVLPNGKEVAVKSLKTGSGQGE 356
F K T + A F + LG G FG V HK +G A+K L
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKL 82
Query: 357 REFS---AEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENR---PV 410
++ E I+ V+ LV L +V E+V+ + HL R P
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 411 MDFATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDN 470
F +I L YLH +I+RD+K N+LID V DFG AK
Sbjct: 143 ARFYA-AQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
+ + GT LAPE S + D ++ GV++ E+ G P
Sbjct: 195 ----TWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
IIHRD+K +NI++ + + DFGLA+ + + + T + T Y APE E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 498 KSDVFSFGVMLLELITG 514
D++S G ++ E+I G
Sbjct: 205 NVDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
IIHRD+K +NI++ + + DFGLA+ + + + T + T Y APE E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 498 KSDVFSFGVMLLELITG 514
D++S G ++ E+I G
Sbjct: 205 NVDIWSVGCIMGEMIKG 221
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 30/242 (12%)
Query: 324 LGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHH-RHLVSLVGYC 381
LG+G + V + + + N ++V VK LK + + E++I+ + ++++L
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVK---KNKIKREIKILENLRGGPNIITLADIV 101
Query: 382 IAGGQRM--LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPR-I 438
R LV+E V+N + L+ + + D+ R + K L Y CH I
Sbjct: 102 KDPVSRTPALVFEHVNNTDFK-QLY---QTLTDYDIRFYM-YEILKALDY----CHSMGI 152
Query: 439 IHRDIKAANILIDDNFEAM-VADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
+HRD+K N++ID + + D+GLA+ + + + RV + + PE ++ +
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYD 210
Query: 498 KS-DVFSFGVMLLELITGRRPV----DMTMMEDSLVEWARPLLGAALEDGI--YDGLVDP 550
S D++S G ML +I + P D D LV A+ L L D I Y+ +DP
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFFHGHDNY---DQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 551 RL 552
R
Sbjct: 268 RF 269
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
IIHRD+K +NI++ + + DFGLA+ + + + T + T Y APE E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 498 KSDVFSFGVMLLELITG 514
D++S G ++ E+I G
Sbjct: 205 NVDIWSVGCIMGEMIKG 221
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 414 ATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDD---NFEAMVADFGLAKLSNDN 470
A+ + ++G A + YLH I HRD+K N+L N + DFG AK +
Sbjct: 133 ASEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTS 186
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
H ++T + Y+APE K + D++S GV++ L+ G P
Sbjct: 187 HNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 232
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 14/105 (13%)
Query: 419 IALGSAKGLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAK-LSNDNHTHVSTR 477
I + A+ + +LH ++HRD+K +NI + V DFGL + D
Sbjct: 169 IFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 478 VM----------GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELI 512
M GT Y++PE + K D+FS G++L EL+
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 414 ATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDD---NFEAMVADFGLAKLSNDN 470
A+ + ++G A + YLH I HRD+K N+L N + DFG AK +
Sbjct: 125 ASEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTS 178
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
H ++T + Y+APE K + D++S GV++ L+ G P
Sbjct: 179 HNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 224
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 414 ATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDD---NFEAMVADFGLAKLSNDN 470
A+ + ++G A + YLH I HRD+K N+L N + DFG AK +
Sbjct: 123 ASEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTS 176
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
H ++T + Y+APE K + D++S GV++ L+ G P
Sbjct: 177 HNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 222
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 414 ATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDD---NFEAMVADFGLAKLSNDN 470
A+ + ++G A + YLH I HRD+K N+L N + DFG AK +
Sbjct: 124 ASEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTS 177
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
H ++T + Y+APE K + D++S GV++ L+ G P
Sbjct: 178 HNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 223
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 414 ATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDD---NFEAMVADFGLAKLSNDN 470
A+ + ++G A + YLH I HRD+K N+L N + DFG AK +
Sbjct: 117 ASEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTS 170
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
H ++T + Y+APE K + D++S GV++ L+ G P
Sbjct: 171 HNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 98/234 (41%), Gaps = 29/234 (12%)
Query: 324 LGQGGFGYVHKGVLPNGKE------VAVKSLKTGSGQGEREFSAEV---EIISRVHHRHL 374
+G GGFG ++ N E V V+ + G E +F V + I + R
Sbjct: 45 IGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQ 104
Query: 375 VSLVGYCIAGGQRML-----VYEFVSNKTLEYHLH---GENRPVMDFATRVRIALGSAKG 426
+ +G + G + Y F+ + L L G+N +T +++ +
Sbjct: 105 LDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG-TFKKSTVLQLGIRMLDV 163
Query: 427 LAYLHEDCHPRIIHRDIKAANILI--DDNFEAMVADFGLAK--LSNDNHTHVSTRVM--- 479
L Y+HE+ +H DIKAAN+L+ + + +AD+GL+ N NH
Sbjct: 164 LEYIHEN---EYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGH 220
Query: 480 -GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDMTMMEDSLVEWAR 532
GT + + + L+ +SDV G +L + G+ P + + + V+ A+
Sbjct: 221 NGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAK 274
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 438 IIHRDIKAANILIDDNF-EAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLT 496
++HRDIK NILID N E + DFG L D V T GT Y PE+ +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 234
Query: 497 EKS-DVFSFGVMLLELITGRRPVD 519
+S V+S G++L +++ G P +
Sbjct: 235 GRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 414 ATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDD---NFEAMVADFGLAKLSNDN 470
A+ + ++G A + YLH I HRD+K N+L N + DFG AK +
Sbjct: 118 ASEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTS 171
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
H ++T + Y+APE K + D++S GV++ L+ G P
Sbjct: 172 HNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 217
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 18/195 (9%)
Query: 325 GQGGFGYVHKGVLPNGKEVAVKSLK---TGSGQGEREFSAEVEIISRVHHRHLVSLVGYC 381
QG + VL + VA+K L +R + E+ ++ V+H++++SL+
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLN-- 90
Query: 382 IAGGQRMLVYEF----VSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPR 437
+ Q+ L EF + + ++ +L + +D + G+ +LH
Sbjct: 91 VFTPQKTL-EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG--- 146
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
IIHRD+K +NI++ + + DFGLA+ + + + T + T Y APE E
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 498 KSDVFSFGVMLLELI 512
D++S G ++ E++
Sbjct: 205 NVDIWSVGCIMGEMV 219
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 414 ATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDD---NFEAMVADFGLAKLSNDN 470
A+ + ++G A + YLH I HRD+K N+L N + DFG AK +
Sbjct: 119 ASEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTS 172
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
H ++T + Y+APE K + D++S GV++ L+ G P
Sbjct: 173 HNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 90/219 (41%), Gaps = 38/219 (17%)
Query: 324 LGQGGFGYVHKGV--LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHRH------LV 375
LG+G FG V + V G VA+K +K E E+ ++ +++ + V
Sbjct: 41 LGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAA-RLEINVLEKINEKDPDNKNLCV 99
Query: 376 SLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCH 435
+ + G + +E + T ++ P R +A + + +LH++
Sbjct: 100 QMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVR-HMAFQLCQAVKFLHDN-- 156
Query: 436 PRIIHRDIKAANIL-IDDNFE------------------AMVADFGLAKLSNDNH-THVS 475
++ H D+K NIL ++ ++E V DFG A +++H T VS
Sbjct: 157 -KLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDHEHHSTIVS 215
Query: 476 TRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITG 514
TR Y APE ++ DV+S G ++ E G
Sbjct: 216 TR-----HYRAPEVILELGWSQPCDVWSIGCIIFEYYVG 249
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 414 ATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDD---NFEAMVADFGLAKLSNDN 470
A+ + ++G A + YLH I HRD+K N+L N + DFG AK +
Sbjct: 119 ASEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTS 172
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
H ++T + Y+APE K + D++S GV++ L+ G P
Sbjct: 173 HNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 414 ATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDD---NFEAMVADFGLAKLSNDN 470
A+ + ++G A + YLH I HRD+K N+L N + DFG AK +
Sbjct: 163 ASEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTS 216
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
H ++T + Y+APE K + D++S GV++ L+ G P
Sbjct: 217 HNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 262
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 414 ATRVRIALGSAKGLAYLHEDCHPRIIHRDIKAANILIDD---NFEAMVADFGLAKLSNDN 470
A+ + ++G A + YLH I HRD+K N+L N + DFG AK +
Sbjct: 169 ASEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTS 222
Query: 471 HTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 517
H ++T + Y+APE K + D++S GV++ L+ G P
Sbjct: 223 HNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 268
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 18/195 (9%)
Query: 325 GQGGFGYVHKGVLPNGKEVAVKSLK---TGSGQGEREFSAEVEIISRVHHRHLVSLVGYC 381
QG + VL + VA+K L +R + E+ ++ V+H++++SL+
Sbjct: 74 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLN-- 128
Query: 382 IAGGQRMLVYEF----VSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPR 437
+ Q+ L EF + + ++ +L + +D + G+ +LH
Sbjct: 129 VFTPQKTL-EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AG 184
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
IIHRD+K +NI++ + + DFGLA+ + + + T + T Y APE E
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKE 242
Query: 498 KSDVFSFGVMLLELI 512
D++S G ++ E++
Sbjct: 243 NVDIWSVGCIMGEMV 257
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 38/221 (17%)
Query: 322 NLLGQGGFGYVHKGV--LPNGKEVAVKSLKTGSGQGEREFSAEVEIISRVHHR------H 373
+ LG+G FG V + + G+ VAVK +K E S E++++ ++
Sbjct: 20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARS-EIQVLEHLNTTDPNSTFR 78
Query: 374 LVSLVGYCIAGGQRMLVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHED 433
V ++ + G +V+E + T ++ P R ++A K + +LH +
Sbjct: 79 CVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIR-KMAYQICKSVNFLHSN 137
Query: 434 CHPRIIHRDIKAANILI--DDNFEAM-----------------VADFGLAKLSNDNH-TH 473
++ H D+K NIL D EA V DFG A +++H T
Sbjct: 138 ---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTL 194
Query: 474 VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITG 514
VSTR Y APE + ++ DV+S G +L+E G
Sbjct: 195 VSTR-----HYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 18/195 (9%)
Query: 325 GQGGFGYVHKGVLPNGKEVAVKSLK---TGSGQGEREFSAEVEIISRVHHRHLVSLVGYC 381
QG + VL + VA+K L +R + E+ ++ V+H++++SL+
Sbjct: 29 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLN-- 83
Query: 382 IAGGQRMLVYEF----VSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPR 437
+ Q+ L EF + + ++ +L + +D + G+ +LH
Sbjct: 84 VFTPQKTL-EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG--- 139
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
IIHRD+K +NI++ + + DFGLA+ + + + T + T Y APE E
Sbjct: 140 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKE 197
Query: 498 KSDVFSFGVMLLELI 512
D++S G ++ E++
Sbjct: 198 NVDIWSVGCIMGEMV 212
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 14/132 (10%)
Query: 389 LVYEFVSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPR-IIHRDIKAAN 447
LV+E+++N + L+ + + DF R + K L Y CH + I+HRD+K N
Sbjct: 117 LVFEYINNTDFK-QLY---QILTDFDIRFYM-YELLKALDY----CHSKGIMHRDVKPHN 167
Query: 448 ILIDDNFEAM-VADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTEKS-DVFSFG 505
++ID + + + D+GLA+ + + + RV + + PE ++ + S D++S G
Sbjct: 168 VMIDHQQKKLRLIDWGLAEFYHPAQEY-NVRVASRY-FKGPELLVDYQMYDYSLDMWSLG 225
Query: 506 VMLLELITGRRP 517
ML +I R P
Sbjct: 226 CMLASMIFRREP 237
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 18/195 (9%)
Query: 325 GQGGFGYVHKGVLPNGKEVAVKSLK---TGSGQGEREFSAEVEIISRVHHRHLVSLVGYC 381
QG + VL + VA+K L +R + E+ ++ V+H++++SL+
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLN-- 90
Query: 382 IAGGQRMLVYEF----VSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPR 437
+ Q+ L EF + + ++ +L + +D + G+ +LH
Sbjct: 91 VFTPQKTL-EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG--- 146
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
IIHRD+K +NI++ + + DFGLA+ + + + T + T Y APE E
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 498 KSDVFSFGVMLLELI 512
D++S G ++ E++
Sbjct: 205 NVDIWSVGCIMGEMV 219
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 18/195 (9%)
Query: 325 GQGGFGYVHKGVLPNGKEVAVKSLK---TGSGQGEREFSAEVEIISRVHHRHLVSLVGYC 381
QG + VL + VA+K L +R + E+ ++ V+H++++SL+
Sbjct: 74 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLN-- 128
Query: 382 IAGGQRMLVYEF----VSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPR 437
+ Q+ L EF + + ++ +L + +D + G+ +LH
Sbjct: 129 VFTPQKTL-EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AG 184
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
IIHRD+K +NI++ + + DFGLA+ + + + T + T Y APE E
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKE 242
Query: 498 KSDVFSFGVMLLELI 512
D++S G ++ E++
Sbjct: 243 NVDIWSVGCIMGEMV 257
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 28/217 (12%)
Query: 321 SNLLGQGGFGYVHKGV-LPNGKEVAVKSLKTGSGQGEREFSA-EVEIISRVHHRHLVSLV 378
S++LGQG V +G G A+K S + E E++ +++H+++V L
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 379 GYCIAGGQR--MLVYEFVSNKTLEYHLHGENR----PVMDFATRVRIALGSAKGLAYLHE 432
R +L+ EF +L L + P +F +R +G G+ +L E
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG---GMNHLRE 130
Query: 433 DCHPRIIHRDIKAANIL--IDDNFEAM--VADFGLAKLSNDNHTHVSTRVMGTFGYLAPE 488
+ I+HR+IK NI+ I ++ +++ + DFG A+ D+ VS + GT YL P+
Sbjct: 131 NG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGTEEYLHPD 185
Query: 489 YASSGKLTE--------KSDVFSFGVMLLELITGRRP 517
L + D++S GV TG P
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 18/195 (9%)
Query: 325 GQGGFGYVHKGVLPNGKEVAVKSLK---TGSGQGEREFSAEVEIISRVHHRHLVSLVGYC 381
QG + VL + VA+K L +R + E+ ++ V+H++++SL+
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLN-- 90
Query: 382 IAGGQRMLVYEF----VSNKTLEYHLHGENRPVMDFATRVRIALGSAKGLAYLHEDCHPR 437
+ Q+ L EF + + ++ +L + +D + G+ +LH
Sbjct: 91 VFTPQKTL-EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHS---AG 146
Query: 438 IIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYLAPEYASSGKLTE 497
IIHRD+K +NI++ + + DFGLA+ + + + T + T Y APE E
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 498 KSDVFSFGVMLLELI 512
D++S G ++ E++
Sbjct: 205 NVDIWSVGCIMGEMV 219
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 42/207 (20%)
Query: 325 GQGGFGYVHKGVLPNGKEVAVKSLK---TGSGQGEREFSAEVEIISRVHHRHLVSLVGYC 381
QG + VL + VA+K L +R + E+ ++ V+H++++SL+
Sbjct: 30 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNV- 85
Query: 382 IAGGQRMLVYEFVSNKTLE----YHLHGENRPVMD--FATRVRIALGSAK---------- 425
F KTLE +L E +MD +++ L +
Sbjct: 86 -----------FTPQKTLEEFQDVYLVME---LMDANLCQVIQMELDHERMSYLLYQMLC 131
Query: 426 GLAYLHEDCHPRIIHRDIKAANILIDDNFEAMVADFGLAKLSNDNHTHVSTRVMGTFGYL 485
G+ +LH IIHRD+K +NI++ + + DFGLA+ + + + T + T Y
Sbjct: 132 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYR 186
Query: 486 APEYASSGKLTEKSDVFSFGVMLLELI 512
APE E D++S G ++ E++
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMV 213
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,157,962
Number of Sequences: 62578
Number of extensions: 631745
Number of successful extensions: 3514
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 226
Number of HSP's that attempted gapping in prelim test: 1364
Number of HSP's gapped (non-prelim): 1141
length of query: 662
length of database: 14,973,337
effective HSP length: 105
effective length of query: 557
effective length of database: 8,402,647
effective search space: 4680274379
effective search space used: 4680274379
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)