BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006084
(662 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q921G8|GCP2_MOUSE Gamma-tubulin complex component 2 OS=Mus musculus GN=Tubgcp2 PE=2
SV=2
Length = 905
Score = 459 bits (1182), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/618 (39%), Positives = 370/618 (59%), Gaps = 31/618 (5%)
Query: 6 PSTPRWNIERPFLTGRFHQETKAASRFADSFSNNGAEMAIGCYDAGVQELLVIDDLLSAL 65
P P W ERP L G F S ++ + IG QE V++DLL L
Sbjct: 175 PVFPAWVYERPTLAGDF---------LIGSGLSSDTVLPIGTLPLASQESAVVEDLLYVL 225
Query: 66 VGIEGRYISIKRRVNHVHGNDTYDSTVTFQVDASMDLALQEMAKRIFPLCESFVLTGQFV 125
VG++GRYI+ + TF VD ++DL+++E+ RI P+ S+ +F+
Sbjct: 226 VGVDGRYITAQPLAGR--------QNRTFLVDPNLDLSIRELVNRILPVAASYSTVTRFI 277
Query: 126 ESRSQFKNGLVNHAFAASLRALLLDYEAMVAQLEHQFRLGRLSIQGLWFYCQPMLGSMQA 185
E +S F+ G VNHA AA++R L+ +Y +V QLE R G LS+Q LWFY QP + ++
Sbjct: 278 EEKSSFEYGQVNHALAAAMRTLVKEYLILVTQLEQLHRQGLLSLQKLWFYIQPAMRTIDI 337
Query: 186 VSAVIHKASANNFTGSAVLNLLQSQAKAMAGDNTVRSLLEKMTQCASNAYLGILERWVYE 245
++++ G + L+LL ++ GD+ + L +T+ AS Y ILE+W+Y
Sbjct: 338 LASLATSVDKGECVGGSTLSLLHDRSFNYTGDSQAQELCLYLTKAASAPYFEILEKWIYR 397
Query: 246 GVIDDPYGEFFIAEDKSLLKESLTQDYDAKYWRQRYS-LKDGIPSFLANIAGKILTTGKY 304
G+I DPY EF + E+ L KE + +DY+ KYW QRY+ L IPSFL +AGKIL+TGKY
Sbjct: 398 GIIHDPYSEFMV-EEHELRKEKIQEDYNDKYWDQRYTVLPQQIPSFLQKVAGKILSTGKY 456
Query: 305 LNVMRECGHSAQVPTSENSKLLSFGSNHHYLECVKVAYEFASGELLNLIKERYDLMGKLR 364
LNV+RECGH P ++ +++ Y+E ++ A+ +AS LL+ + E +L+ LR
Sbjct: 457 LNVVRECGHDVTCPVAK--EIIYTLKERAYVEQIEKAFNYASKVLLDFLMEEKELVAHLR 514
Query: 365 SIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLT 424
SIKRY L+DQGDF VHFMD+ EEL K +++I + +L++LL++ALR + A DP +DL
Sbjct: 515 SIKRYFLMDQGDFFVHFMDLTEEELRKPVEDIILTRLEALLELALRMSTANTDPFKDDLK 574
Query: 425 CSVERSSLLKRMATLKGVEIK-----TSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVI 479
+ L+ ++ + +E K T +D +L +++GLE FS Y V+WPLS++I
Sbjct: 575 IELMPHDLITQLLRVLAIETKQEKAMTHADPTEL----TLSGLEAFSFDYMVKWPLSLII 630
Query: 480 SRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQGARAFNA-SGTAISRSSLLCRSMLKFI 538
+RKALT+YQM+FR +F+CKHVERQLC W ++ A+ S + + L + ML F+
Sbjct: 631 NRKALTRYQMLFRHMFYCKHVERQLCSVWISNKTAKQHALHSAKWFAGAFTLRQRMLNFV 690
Query: 539 NSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLLHLPDLLKKVER 598
++ +Y+ FEV+EP WH++ L++A +ID+V+ HH FLD CL++C+L P+LLK +
Sbjct: 691 QNIQYYMMFEVMEPTWHILEKNLKSASNIDDVLGHHTSFLDNCLKDCMLTNPELLKVFSK 750
Query: 599 LKSLCLQYAAATQWLISS 616
L S+C+ + Q S
Sbjct: 751 LMSVCVMFTNCMQKFTQS 768
>sp|Q9BSJ2|GCP2_HUMAN Gamma-tubulin complex component 2 OS=Homo sapiens GN=TUBGCP2 PE=1
SV=2
Length = 902
Score = 455 bits (1170), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/618 (39%), Positives = 374/618 (60%), Gaps = 31/618 (5%)
Query: 6 PSTPRWNIERPFLTGRFHQETKAASRFADSFSNNGAEMAIGCYDAGVQELLVIDDLLSAL 65
P P W ERP L G F S + A + IG QE V++DLL L
Sbjct: 175 PIFPAWVYERPALIGDF--------LIGAGISTDTA-LPIGTLPLASQESAVVEDLLYVL 225
Query: 66 VGIEGRYISIKRRVNHVHGNDTYDSTVTFQVDASMDLALQEMAKRIFPLCESFVLTGQFV 125
VG++GRY+S + + TF VD ++DL+++E+ RI P+ S+ +F+
Sbjct: 226 VGVDGRYVSAQPLAGR--------QSRTFLVDPNLDLSIRELVHRILPVAASYSAVTRFI 277
Query: 126 ESRSQFKNGLVNHAFAASLRALLLDYEAMVAQLEHQFRLGRLSIQGLWFYCQPMLGSMQA 185
E +S F+ G VNHA AA++R L+ ++ +V+QLE R G LS+Q LWFY QP + +M
Sbjct: 278 EEKSSFEYGQVNHALAAAMRTLVKEHLILVSQLEQLHRQGLLSLQKLWFYIQPAMRTMDI 337
Query: 186 VSAVIHKASANNFTGSAVLNLLQSQAKAMAGDNTVRSLLEKMTQCASNAYLGILERWVYE 245
++++ G + L+LL ++ + GD+ + L +T+ AS Y +LE+W+Y
Sbjct: 338 LASLATSVDKGECLGGSTLSLLHDRSFSYTGDSQAQELCLYLTKAASAPYFEVLEKWIYR 397
Query: 246 GVIDDPYGEFFIAEDKSLLKESLTQDYDAKYWRQRYSL-KDGIPSFLANIAGKILTTGKY 304
G+I DPY EF + E+ L KE + +DY+ KYW QRY++ + IPSFL +A KIL+TGKY
Sbjct: 398 GIIHDPYSEFMV-EEHELRKERIQEDYNDKYWDQRYTIVQQQIPSFLQKMADKILSTGKY 456
Query: 305 LNVMRECGHSAQVPTSENSKLLSFGSNHHYLECVKVAYEFASGELLNLIKERYDLMGKLR 364
LNV+RECGH P ++ +++ Y+E ++ A+ +AS LL+ + E +L+ LR
Sbjct: 457 LNVVRECGHDVTCPVAK--EIIYTLKERAYVEQIEKAFNYASKVLLDFLMEEKELVAHLR 514
Query: 365 SIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLT 424
SIKRY L+DQGDF VHFMD+A EEL K +++IT +L++LL++ALR + A DP +DL
Sbjct: 515 SIKRYFLMDQGDFFVHFMDLAEEELRKPVEDITPPRLEALLELALRMSTANTDPFKDDLK 574
Query: 425 CSVERSSLLKRMATLKGVEIK-----TSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVI 479
+ L+ ++ + +E K +D +L +++GLE FS Y V+WPLS++I
Sbjct: 575 IDLMPHDLITQLLRVLAIETKQEKAMAHADPTEL----ALSGLEAFSFDYIVKWPLSLII 630
Query: 480 SRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQGARAFNA-SGTAISRSSLLCRSMLKFI 538
+RKALT+YQM+FR +F+CKHVERQLC W ++ A+ + S + + L + ML F+
Sbjct: 631 NRKALTRYQMLFRHMFYCKHVERQLCSVWISNKTAKQHSLHSAQWFAGAFTLRQRMLNFV 690
Query: 539 NSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLLHLPDLLKKVER 598
++ +Y+ FEV+EP WH++ L++A +ID+V+ HH FLD CL++C+L P+LLK +
Sbjct: 691 QNIQYYMMFEVMEPTWHILEKNLKSASNIDDVLGHHTGFLDTCLKDCMLTNPELLKVFSK 750
Query: 599 LKSLCLQYAAATQWLISS 616
L S+C+ + Q S
Sbjct: 751 LMSVCVMFTNCMQKFTQS 768
>sp|Q5R5J6|GCP2_PONAB Gamma-tubulin complex component 2 OS=Pongo abelii GN=TUBGCP2 PE=2
SV=1
Length = 902
Score = 453 bits (1166), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/618 (38%), Positives = 374/618 (60%), Gaps = 31/618 (5%)
Query: 6 PSTPRWNIERPFLTGRFHQETKAASRFADSFSNNGAEMAIGCYDAGVQELLVIDDLLSAL 65
P P W ERP L G F S + A + IG QE V++DLL L
Sbjct: 175 PIFPAWVYERPALIGDF--------LIGAGISTDTA-LPIGTLPLASQESAVVEDLLYVL 225
Query: 66 VGIEGRYISIKRRVNHVHGNDTYDSTVTFQVDASMDLALQEMAKRIFPLCESFVLTGQFV 125
VG++GRY++ + + TF VD ++DL+++E+ RI P+ S+ +F+
Sbjct: 226 VGVDGRYVTAQPLAGR--------QSRTFLVDPNLDLSIRELVNRILPVAASYSTVTRFI 277
Query: 126 ESRSQFKNGLVNHAFAASLRALLLDYEAMVAQLEHQFRLGRLSIQGLWFYCQPMLGSMQA 185
E +S F+ G VNHA AA++R L+ ++ +V+QLE R G LS+Q LWFY QP + +M
Sbjct: 278 EEKSSFEYGQVNHALAAAMRTLVKEHLILVSQLEQLHRQGLLSLQKLWFYIQPAMRTMDI 337
Query: 186 VSAVIHKASANNFTGSAVLNLLQSQAKAMAGDNTVRSLLEKMTQCASNAYLGILERWVYE 245
++++ G + L+LL ++ + GD+ + L +T+ AS Y +LE+W+Y
Sbjct: 338 LASLATSVDKGECLGGSTLSLLHDRSFSYTGDSQAQELCLYLTKAASAPYFEVLEKWIYR 397
Query: 246 GVIDDPYGEFFIAEDKSLLKESLTQDYDAKYWRQRYSL-KDGIPSFLANIAGKILTTGKY 304
G+I DPY EF + E+ L KE + +DY+ KYW QRY++ + IPSFL +A KIL+TGKY
Sbjct: 398 GIIHDPYSEFMV-EEHELRKERIQEDYNDKYWDQRYTIVQQQIPSFLQKMADKILSTGKY 456
Query: 305 LNVMRECGHSAQVPTSENSKLLSFGSNHHYLECVKVAYEFASGELLNLIKERYDLMGKLR 364
LNV+RECGH P ++ +++ Y+E ++ A+ +AS LL+ + E +L+ LR
Sbjct: 457 LNVVRECGHDVTCPVAK--EIIYTLKERAYVEQIEKAFNYASKVLLDFLMEEKELVAHLR 514
Query: 365 SIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLT 424
SIKRY L+DQGDF VHFMD+A EEL K +++IT +L++LL++ALR + A DP +DL
Sbjct: 515 SIKRYFLMDQGDFFVHFMDLAEEELRKPVEDITPPRLEALLELALRMSTANTDPFKDDLK 574
Query: 425 CSVERSSLLKRMATLKGVEIKTS-----SDSVDLEQPVSITGLETFSLSYKVQWPLSIVI 479
+ L+ ++ + +E K +D +L +++GLE FS Y V+WPLS++I
Sbjct: 575 IDLMPHDLITQLLRVLAIETKQEKAMAHADPTEL----TLSGLEAFSFDYIVKWPLSLII 630
Query: 480 SRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQGARAFN-ASGTAISRSSLLCRSMLKFI 538
+RKALT+YQM+FR +F+CKHVERQLC W ++ A+ + S + + L + ML F+
Sbjct: 631 NRKALTRYQMLFRHMFYCKHVERQLCSVWISNKTAKQHSLPSAQWFAGAFTLRQRMLNFV 690
Query: 539 NSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLLHLPDLLKKVER 598
++ +Y+ FEV+EP WH++ L++A +ID+V+ +H FLD CL++C+L P+LLK +
Sbjct: 691 QNIQYYMMFEVMEPTWHILEKNLKSASNIDDVLGYHTGFLDTCLKDCMLTNPELLKVFSK 750
Query: 599 LKSLCLQYAAATQWLISS 616
L S+C+ + Q S
Sbjct: 751 LMSVCVMFTNCMQKFTQS 768
>sp|Q95ZG3|SPC97_DICDI Spindle pole body component 97 OS=Dictyostelium discoideum GN=spc97
PE=2 SV=2
Length = 1335
Score = 363 bits (932), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 218/704 (30%), Positives = 359/704 (50%), Gaps = 101/704 (14%)
Query: 6 PSTPRWNIERPFLT-GRFHQETKAASRFADSFSNNGAEMAIGCYDAGVQELLVIDDLLSA 64
P P W ERPFL G + + ++ + +E ++I+DLLS
Sbjct: 375 PKFPEWTKERPFLNYGYLANISTNYTSLILPSKYEQTKIQLSSIPNYFREQILIEDLLST 434
Query: 65 LVGIEGRYISIKRRVNHVHGNDTYDST-VTFQVDASMDLALQEMAKRIFPLCESFVLTGQ 123
++GIEG I I V + +D+ S V+F V+ +D + ++ +RI PLC +
Sbjct: 435 MIGIEGECIHIG--VVQENEDDSLQSNLVSFVVEGEVDPSNNDLVQRILPLCSYYSFVND 492
Query: 124 FVESRSQFKNGLVNHAFAASLRALLLDYEAMVAQLEHQFRLGRLSIQGLWFYCQPMLGSM 183
F++ R ++ G++NH+ S+ LL +Y +V+QLE Q + RLS+Q +WFY QP + +
Sbjct: 493 FIQIRYAYEWGIINHSLCFSIDQLLKEYLVLVSQLEGQLKSERLSLQRMWFYLQPTIKTF 552
Query: 184 QAVSAVIHKASANNFTGSAVLNLLQSQAKAMAGDNTVRSLLEKMTQCASNAYLGILERWV 243
+ + V + N G V+NLL + D L + + + +L +L+ W+
Sbjct: 553 EILYRVTSEIMRCNSHGVQVINLLLKLQSKYSSDKKTDDLFHYLIKATTLPFLEMLDLWI 612
Query: 244 YEGVIDDPYGEFFIAEDKSLLKESLTQDYDAKYWRQRYSLK-DGIPSFLANIAGKILTTG 302
++G+I D Y EF I E+ L ++++ +D++ YW QRY ++ D IP +L + A KILTTG
Sbjct: 613 HQGIIRDTYFEFMIEENTDLKRDNINRDFNDLYWEQRYQIRQDQIPKYLQSHALKILTTG 672
Query: 303 KYLNVMRECGHS------------------------------------------------ 314
KYLNV+REC S
Sbjct: 673 KYLNVVRECNQSISQQQQHNKSDNNNNNNNNVKLNSQQQLLLLKLNTTQQQQQQQLSSTS 732
Query: 315 -AQVPTSENSKLLSFGSNHH-YLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLL 372
+ +PT+ ++ + N + Y++ ++ AY++ASG LLNL+ L+ +L++IK Y LL
Sbjct: 733 ASMIPTT----IIEYSKNENVYIDKIEKAYDYASGILLNLLINERHLISRLKAIKHYFLL 788
Query: 373 DQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALR-STAAAADPCHEDLTCSVERSS 431
+GDF HFMD +EL K LD+I + K+ SLL ++LR S+ + D +DL C
Sbjct: 789 CKGDFFSHFMDTTYDELKKPLDQINMVKMNSLLQLSLRTSSISEEDEFKDDLECEFIPYK 848
Query: 432 LLKRM--------------------------------------ATLKGVEIKTSSDSVDL 453
L+ ++ T + S+ + ++
Sbjct: 849 LVDQLLNIININNFNNPTTTTTTNTSSNNITATTNTSSNNTTINTTVNTTLIQSTSAHEV 908
Query: 454 EQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQG 513
+ + G+E+ + +Y V WPLS++ISRK+L KYQ++FR LF CKHVE+ L W HQ
Sbjct: 909 LKTNKLFGIESLAFNYNVGWPLSLIISRKSLIKYQIIFRHLFLCKHVEKVLVDTWSQHQF 968
Query: 514 AR-AFNASG--TAISRSSLLCRSMLKFINSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEV 570
R ++N G T +S + LL M+ F+ +L +Y+ EVLEPNW+ M N ++T+K++D+V
Sbjct: 969 RRSSYNKPGLSTLLSFTHLLRHRMIHFLQNLEYYMMLEVLEPNWNKMKNSIKTSKTVDDV 1028
Query: 571 IQHHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQYAAATQWLI 614
I+ H+ FL+ CL EC+L L+ + + SLC+ +A T ++
Sbjct: 1029 IRIHNDFLETCLTECMLTDTKLVNILMKFMSLCITFANFTNEMM 1072
>sp|Q9XYP7|GCP2_DROME Gamma-tubulin complex component 2 homolog OS=Drosophila
melanogaster GN=Grip84 PE=1 SV=2
Length = 852
Score = 343 bits (879), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 197/617 (31%), Positives = 340/617 (55%), Gaps = 41/617 (6%)
Query: 53 QELLVIDDLLSALVGIEGRYISIKRRVNHVHGNDTYDSTVTFQVDASMDLALQEMAKRIF 112
QE +++D+LL L GI + ++ + G YD+ F + +D +L + I
Sbjct: 197 QESMLLDELLHCLTGIRESLLVPQKPIISAVGLAKYDTD--FDIHTHLDRSLTHQVREIL 254
Query: 113 PLCESFVLTGQFVESRSQFKNGLVNHAFAASLRALLLDYEAMVAQLEHQFRLGRLSIQGL 172
PL F+ + + + G V ++ +L+ L D+ ++ Q E + R RL++Q L
Sbjct: 255 PLASYFMGVQKIIAATDGL--GQVMNSLNEALQELTHDFYLIIVQAEQELRHNRLTLQKL 312
Query: 173 WFYCQPMLGSMQAVSAVIHKASANNFTGSAVLNLLQSQAKAMAGDNTVRSLLEKMTQCAS 232
+Y QP + M V + + ++ + VL L + K + G+ + L+ + + A+
Sbjct: 313 LYYLQPTMWVMHEVWSSLVIIQLSDSRDAEVLTYLHERIKRLEGNKDAQQLIIGLVRKAA 372
Query: 233 NAYLGILERWVYEGVIDDPYGEFFIAEDKSLLKESLTQDYDAKYWRQRYSLKD-GIPSFL 291
Y+ +L+ W+ +GVI D + EF + +++ + ++ L + Y YW +RY+L+D IPSFL
Sbjct: 373 KPYMRMLQMWIQKGVIVDRHREFLVVDNEVIHRDELPEHYSDDYWERRYTLRDEQIPSFL 432
Query: 292 ANIAGKILTTGKYLNVMRECGHSAQVPTSENSKLLSFGSNHHYLECVKVAYEFASGELLN 351
A + KIL TGKYLNV+R+CG +PT E + S H + + AY FA+ LL+
Sbjct: 433 AKYSDKILRTGKYLNVIRQCGKRV-MPTQEMNLEFDPTSERH-VSVINDAYYFAARMLLD 490
Query: 352 LIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALRS 411
++ DLMG L+S+KRYLLL+QGDF + FMD +EL K +D + L++LL + LR
Sbjct: 491 VLLTENDLMGHLQSVKRYLLLNQGDFTMQFMDACEDELTKNVDHVLPMTLENLLGLTLRI 550
Query: 412 TAAAADPCHEDLTCSVERSSLLKRMATLKGVEIKTSSDSVDLEQPVSITGLETFSLSYKV 471
++A DP +DL C + L+ +M+ +I ++ + + ++GLE F+ +Y+V
Sbjct: 551 SSARNDPYKDDLHCELLPYDLVTQMS-----KIMKKEENWQAQPRLDLSGLECFAFTYEV 605
Query: 472 QWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQGARAFNASGTAISRSSLLC 531
+WP S+V++ +++KYQM+FR LF+CKHVERQLC W+ + AR F ++ R++
Sbjct: 606 KWPCSLVLNHISISKYQMLFRQLFYCKHVERQLCKIWKENSIARQFEPQAASLYRAAFTL 665
Query: 532 RS-MLKFINSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLL-HL 589
R M+ I +L +Y+ E++EPNWH+ +++T +++D V++ H FLD CL+ C+L
Sbjct: 666 RQRMMNAIQNLEYYMMIEIIEPNWHIFIEKMKTVENVDNVLRLHQDFLDSCLKNCMLTES 725
Query: 590 PDLLKKVERLKSLCLQYA------------AATQWLISSSID----------LPKLE--- 624
L + + +L +CL+Y A + ++ S D P++E
Sbjct: 726 SHLNRSIFKLCKICLKYCEFIQITQRYFQDAELRSMVRDSADSSESEQESLHCPQIETPL 785
Query: 625 EPSDGFSGSEKFKRLKL 641
+P+D F SE+ +R L
Sbjct: 786 DPTDTF--SERVRRFDL 800
>sp|Q9Y705|ALP4_SCHPO Spindle pole body component alp4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=alp4 PE=1 SV=1
Length = 784
Score = 278 bits (711), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 210/674 (31%), Positives = 333/674 (49%), Gaps = 103/674 (15%)
Query: 53 QELLVIDDLLSALVGIEGRYISIKRRVNHVHGNDTYDSTV---TFQVDASMDLALQEMAK 109
QE +I++LL+A +G+EG ++ ++ + + +++ + +F + DL ++++A
Sbjct: 67 QEACLINELLNAFMGMEGVFVHLQ----DMKASSEFETIIMPPSFYILPGFDLGIKDIAS 122
Query: 110 RIFPLCESFVLTGQFVESRSQFKNGLVNHAFAASLRALLLDYEAMVAQLEHQFRLG-RLS 168
+ + ++ F+ESRS F+ G VNHA A+LR ++DY ++ Q E+Q R+ S
Sbjct: 123 EMLEMGSHYLSITAFIESRSHFEYGFVNHALCAALRKFVMDYVVLIMQCENQSRIDPNFS 182
Query: 169 IQGLWFYCQPMLGSMQAVSAVIH--------KASANNFTG-----------------SAV 203
+Q L Y P S++ V ++ AS+++ G S V
Sbjct: 183 LQTLRLYTLPTSRSLRQVYLILRDLLLSMEKNASSSDDLGLSNIDDLLEQLNEGNDISHV 242
Query: 204 LNLLQSQAKA----------------MAGDNTVRSLLEKMTQCASNAYLGILERWVYEGV 247
+N +S+ K AGD R +L + + AS Y +L W++ G+
Sbjct: 243 VNATRSKKKVCKGGQVISFLTESLTKYAGDPVARKILTYLLREASRPYTKMLNEWIHLGL 302
Query: 248 IDDPYGEFFIAEDKSLLKESLTQDYDAKYWRQRYSLK-DGIPSFLANIAGKILTTGKYLN 306
++DPY EF I K + L +DY +YW +RY ++ D +P L ++ K+L GKYLN
Sbjct: 303 VNDPYDEFMIKIHKGITSMQLDEDYTDEYWEKRYVIREDQVPPQLLDLQNKVLFAGKYLN 362
Query: 307 VMRECGHSAQVPTSENSK------LL---SFGSNHHYLECVKVAYEFASGELLNLIKERY 357
V+ EC S N+K LL +F ++ L + AY +A+ LL L++
Sbjct: 363 VVLECRKGVNNLASLNAKDDTQNQLLWPSTFDDDNFTLNIMN-AYVYANESLLQLLQSSQ 421
Query: 358 DLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALR--STAAA 415
L L S+K Y LDQ DF F+D A+ EL K I++ KLQS LD+ALR T A
Sbjct: 422 SLYAHLYSLKHYFFLDQSDFFTTFLDNAQHELRKPAKYISITKLQSQLDLALRQPGTITA 481
Query: 416 ADPCHEDLTCSVERSSL---LKRMATLKGVEIKTSS-------DSVDLEQPVS------- 458
DP E +T V ++SL L + ++ G+E TSS +S+ + V
Sbjct: 482 TDPHKEYVTVEVNQTSLIDWLMHIVSISGLEEGTSSQGNEVWNESITKQADVGNETRNFE 541
Query: 459 ------------------ITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHV 500
I G ET L YKV +PLS+++SRKA+ +YQ++FR +HV
Sbjct: 542 SEHNRSTQGTSKVGSDKDINGFETMQLCYKVPFPLSLILSRKAIIRYQLLFRYFLLLRHV 601
Query: 501 ERQLCGAWQVHQGARAF--NASGTAIS---RSSLLCRS-MLKFINSLLHYLTFEVLEPNW 554
E QL +W H A+ N+S I R+S L R+ ML F+ +++Y T EV+E +W
Sbjct: 602 EMQLENSWVQHSKNSAWRLNSSNAKIEQWKRNSWLLRTRMLSFVQKIIYYTTSEVIETHW 661
Query: 555 HVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQYAAATQWLI 614
L+ A+++D ++Q H FLD CL+EC+L LLK +L + C +A+ T
Sbjct: 662 GKFMGELENARTVDNLMQEHIDFLDTCLKECMLTNSRLLKVQSKLLNTCAMFASYTSTFT 721
Query: 615 SSSIDLPKLEEPSD 628
S L EE D
Sbjct: 722 RSLYLLENSEESFD 735
>sp|Q96CW5|GCP3_HUMAN Gamma-tubulin complex component 3 OS=Homo sapiens GN=TUBGCP3 PE=1
SV=2
Length = 907
Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 149/568 (26%), Positives = 273/568 (48%), Gaps = 80/568 (14%)
Query: 52 VQELLVIDDLLSALVGIEGRYISIKRRVNHVHGNDTYDSTVTFQVDASMDLALQEMAKRI 111
+ E ++ D+L GI+G+ I + N+T ++ + A++ +L++ A R+
Sbjct: 245 ITEAALVRDILYVFQGIDGKNIKM---------NNT-ENCYKVEGKANLSRSLRDTAVRL 294
Query: 112 FPLCESFVLTGQFVESRSQFKN-GLVNHAFAASLRALLLDYEAMVAQLEHQFRL------ 164
L ++ + RS ++ GLV +F A+L L +Y +++ L Q +L
Sbjct: 295 SELGWLHNKIRRYTDQRSLDRSFGLVGQSFCAALHQELREYYRLLSVLHSQLQLEDDQGV 354
Query: 165 -----GRLSIQGL--WFYCQPMLGSMQAVSAVIHKASANNFTGSAVLNLLQSQAKAMAGD 217
L+++ L W Y P + ++ ++A++ G + + + + K GD
Sbjct: 355 NLGLESSLTLRRLLVWTY-DPKI-RLKTLAALVDHCQGRK--GGELASAVHAYTKT--GD 408
Query: 218 NTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDKSLLKESLTQDYDAKYW 277
+RSL++ + S+ L L RW+Y+G ++D Y EFF+A D ++ + L W
Sbjct: 409 PYMRSLVQHILSLVSHPVLSFLYRWIYDGELEDTYHEFFVASDPTVKTDRL--------W 460
Query: 278 RQRYSL-KDGIPSFLA-NIAGKILTTGKYLNVMRECGHSAQVPTS------------ENS 323
+Y+L K IPSF+ + + K+L GK +N + + H Q PT+ +++
Sbjct: 461 HDKYTLRKSMIPSFMTMDQSRKVLLIGKSINFLHQVCHD-QTPTTKMIAVTKSAESPQDA 519
Query: 324 KLLSFGSNHHYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMD 383
L + + + AY S LL+++ ++Y L+ +++++RYLLL QGDF+ H MD
Sbjct: 520 ADLFTDLENAFQGKIDAAYFETSKYLLDVLNKKYSLLDHMQAMRRYLLLGQGDFIRHLMD 579
Query: 384 IAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVE 443
+ + EL++ + L +L+ A+R+T A D +L+R+
Sbjct: 580 LLKPELVRPATTLYQHNLTGILETAVRATNAQFDS-----------PEILRRL------- 621
Query: 444 IKTSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQ 503
D LE TG + FSL Y V P++ V +R+ ++ Y VF L+ K +E
Sbjct: 622 -----DVRLLEVSPGDTGWDVFSLDYHVDGPIATVFTRECMSHYLRVFNFLWRAKRMEYI 676
Query: 504 LCGAWQVH----QGARAFNASGTAISRSSLLCRSMLKFINSLLHYLTFEVLEPNWHVMHN 559
L + H + R + + +L M+ FI+ + +Y+TFEVLE +W + N
Sbjct: 677 LTDIRKGHMCNAKLLRNMPEFSGVLHQCHILASEMVHFIHQMQYYITFEVLECSWDELWN 736
Query: 560 RLQTAKSIDEVIQHHDFFLDKCLRECLL 587
++Q A+ +D +I H+ FLD + CLL
Sbjct: 737 KVQQAQDLDHIIAAHEVFLDTIISRCLL 764
>sp|O73787|GCP3_XENLA Gamma-tubulin complex component 3 homolog OS=Xenopus laevis
GN=tubgcp3 PE=1 SV=1
Length = 906
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 148/572 (25%), Positives = 269/572 (47%), Gaps = 88/572 (15%)
Query: 52 VQELLVIDDLLSALVGIEGRYISIKRRVNHVHGNDTYDSTVTFQVDASMDLA--LQEMAK 109
+ E ++ DLL GI+G+++ + +S ++VD + ++ L+++
Sbjct: 244 ITETSLVRDLLYVFQGIDGKFVKM------------CNSENCYKVDGKVAVSKSLKDITS 291
Query: 110 RIFPLCESFVLTGQFVESRSQFKN-GLVNHAFAASLRALLLDYEAMVAQLEHQFRL---- 164
++ L ++ + RS + GLV +F A+L L +Y +++ L Q ++
Sbjct: 292 KLSELGWLHNKIKKYTDQRSLDRAFGLVGQSFCAALHQELKEYYRLLSVLHSQLQVEDDQ 351
Query: 165 -------GRLSIQGLWFYCQPMLGSMQAVSAVIHKASANNFTGSAVLNLLQSQAKAMAGD 217
L+++ L + ++ ++A++ G + + + + K GD
Sbjct: 352 GVNLGVESSLTLRRLLVWTFDPKIRLKTLAALVDHCQGRK--GGELASAVHAYTKT--GD 407
Query: 218 NTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDKSLLKESLTQDYDAKYW 277
+RSL++ + + L L RW+Y+G ++D Y EFF+A D + + L W
Sbjct: 408 PYMRSLVQHILGLVAYPILNFLYRWIYDGELEDTYHEFFVASDPVVKTDRL--------W 459
Query: 278 RQRYSL-KDGIPSFLA-NIAGKILTTGKYLNVMRECGHSAQVPTSENSKLLSFGSN---- 331
+YSL K IPSF+ + + K+L GK +N + + H Q P S K ++ G +
Sbjct: 460 HDKYSLRKSMIPSFMTMDQSRKVLLIGKSINFLHQVCHD-QTPAS---KAMAVGKSAESP 515
Query: 332 -----------HHYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVH 380
+ + + AY S LL+++ + Y+L+ +++++RYLLL QGDF+ H
Sbjct: 516 KDAAELFTDLENAFQTKIDAAYFDTSKYLLDVLNKNYNLLEHMQAMRRYLLLGQGDFIRH 575
Query: 381 FMDIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLK 440
MD+ + EL++ + L +L+ A+R+T A D +LKR+
Sbjct: 576 LMDLLKPELVRPATTLYQHNLTGILETAVRATNAQFD-----------NPEILKRL---- 620
Query: 441 GVEIKTSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHV 500
D LE TG + FSL Y V P++ V +R+ ++ Y VF L+ K +
Sbjct: 621 --------DVRLLEVSPGDTGWDVFSLDYHVDGPIATVFTRECMSHYLRVFNFLWRAKRM 672
Query: 501 ERQLCGAWQVHQ-GARAFNA----SGTAISRSSLLCRSMLKFINSLLHYLTFEVLEPNWH 555
E L W+ H A+ SG + + +L M+ FI+ + +Y+TFEVLE +W
Sbjct: 673 EYILTDIWKGHMCNAKLLKGMPELSGV-LHQCHILASEMVHFIHQMQYYITFEVLECSWD 731
Query: 556 VMHNRLQTAKSIDEVIQHHDFFLDKCLRECLL 587
+ N++ A+ +D +I HD FLD + CLL
Sbjct: 732 ELWNKVLKAQDLDHIIAAHDVFLDTIISRCLL 763
>sp|P58854|GCP3_MOUSE Gamma-tubulin complex component 3 OS=Mus musculus GN=Tubgcp3 PE=2
SV=2
Length = 905
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 145/566 (25%), Positives = 268/566 (47%), Gaps = 76/566 (13%)
Query: 52 VQELLVIDDLLSALVGIEGRYISIKRRVNHVHGNDTYDSTVTFQVDASMDLALQEMAKRI 111
V E ++ D+L GI+G+ I + + ++ + A+++ +L++ A R+
Sbjct: 243 VTEAALVRDILYVFQGIDGKNIKMS----------STENCYKVEAKANLNKSLRDTAVRL 292
Query: 112 FPLCESFVLTGQFVESRSQFKN-GLVNHAFAASLRALLLDYEAMVAQLEHQFRL------ 164
L ++ + RS ++ GLV +F A+L L +Y +++ L Q +L
Sbjct: 293 AELGWLHNKIRKYADQRSLDRSFGLVGQSFCAALHQELKEYYRLLSVLHSQLQLEDDQGV 352
Query: 165 -----GRLSIQGLWFYCQPMLGSMQAVSAVIHKASANNFTGSAVLNLLQSQAKAMAGDNT 219
L+++ L + ++ ++A++ G + + + + K GD
Sbjct: 353 NLGLESSLTLRRLLVWTYDPKIRLKTLAALVDHCQGRK--GGELASAVHAYTKT--GDPY 408
Query: 220 VRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDKSLLKESLTQDYDAKYWRQ 279
++SL++ + S+ L L RW+Y+G ++D Y EFF+A D ++ + L W
Sbjct: 409 MKSLVQHILSLVSHPVLSFLYRWIYDGELEDTYHEFFVASDPTVKTDRL--------WHD 460
Query: 280 RYSL-KDGIPSFLA-NIAGKILTTGKYLNVMRECGHSAQVPTSE------------NSKL 325
+Y+L K IPSF+ + + K+L GK +N + + H Q PT++ ++
Sbjct: 461 KYTLRKSMIPSFITMDQSRKVLLIGKSINFLHQVCHD-QTPTTKMIAVTKSAESPRDAAD 519
Query: 326 LSFGSNHHYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIA 385
L + + + AY S LL+++ ++Y L+ +++++RYLLL QGDF+ H MD+
Sbjct: 520 LFTDLENAFQGKIDAAYFETSKYLLDVLNKKYSLLEHMQAMRRYLLLGQGDFIRHLMDLL 579
Query: 386 REELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEIK 445
+ EL++ + L +L+ A+R+T A D +LKR+
Sbjct: 580 KPELVRPATTLYQHNLTGILETAVRATNAQFDS-----------PEILKRL--------- 619
Query: 446 TSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLC 505
D LE TG + FSL Y V P++ V +R+ ++ Y VF L+ K +E L
Sbjct: 620 ---DVRLLEVSPGDTGWDVFSLDYHVDGPIATVFTRECMSHYLRVFNFLWRAKRMEYILT 676
Query: 506 GAWQVH----QGARAFNASGTAISRSSLLCRSMLKFINSLLHYLTFEVLEPNWHVMHNRL 561
+ H + R + + +L M+ FI+ + +Y+TFEVLE +W + NR+
Sbjct: 677 DIRKGHMCNAKLLRNMPEFSGVLHQCHILASEMVHFIHQMQYYITFEVLECSWDELWNRV 736
Query: 562 QTAKSIDEVIQHHDFFLDKCLRECLL 587
Q A+ +D +I H+ FL+ CLL
Sbjct: 737 QQAQDLDHIIAAHEAFLNTITSRCLL 762
>sp|Q9XYP8|GCP3_DROME Gamma-tubulin complex component 3 homolog OS=Drosophila
melanogaster GN=l(1)dd4 PE=1 SV=2
Length = 917
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 186/391 (47%), Gaps = 52/391 (13%)
Query: 216 GDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDKSLLKESLTQDYDAK 275
G++ V L+E + + ++ +W+ EG I D + EFF+ K + + L
Sbjct: 402 GNDMVNKLVEDLLTAICGPLVRMISKWILEGGISDMHREFFVKSIKDVGVDRL------- 454
Query: 276 YWRQRYSLK-DGIPSFLA-NIAGKILTTGKYLNVMRE-CGHSA---------QVPTSENS 323
W ++ L+ +P F+ ++A KIL TGK +N +RE C +V S S
Sbjct: 455 -WHDKFRLRLPMLPKFVPMDMANKILMTGKSINFLREICEEQGMMKERDELMKVMESSAS 513
Query: 324 KLLSFGSNHHYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMD 383
++ S+ + + V+ Y+ S +L+++ + L+ L ++RYLLL QGDF+ ++
Sbjct: 514 QIFSYTPDTSWHAAVETCYQQTSKHVLDIMVGPHKLLDHLHGMRRYLLLGQGDFISILIE 573
Query: 384 IAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVE 443
+ EL + +I L S+LD ALR T A D +L +
Sbjct: 574 NMKNELERPGLDIYANDLTSMLDSALRCTNAQYDD-----------PDILNHL------- 615
Query: 444 IKTSSDSVDLEQPVS-ITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVER 502
V +++P + G SL Y V PL+ ++ + Y+++F+ L+ KH+E
Sbjct: 616 ------DVIVQRPFNGDIGWNIISLQYIVHGPLAAML-ESTMPTYKVLFKPLWRMKHMEF 668
Query: 503 QLC-GAWQVHQG-ARAFNASGTAISRSS----LLCRSMLKFINSLLHYLTFEVLEPNWHV 556
L W+ G A+A + I ++S L ++ FI+ + +Y+ FEV+E NW
Sbjct: 669 VLSMKIWKEQMGNAKALRTMKSEIGKASHRLNLFTSEIMHFIHQMQYYVLFEVIECNWVE 728
Query: 557 MHNRLQTAKSIDEVIQHHDFFLDKCLRECLL 587
+ ++Q A ++DE+++ H+ FL L C +
Sbjct: 729 LQKKMQKATTLDEILEAHEKFLQTILVGCFV 759
>sp|Q9USQ2|ALP6_SCHPO Spindle pole body component alp6 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=alp6 PE=1 SV=2
Length = 832
Score = 132 bits (332), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 124/461 (26%), Positives = 218/461 (47%), Gaps = 52/461 (11%)
Query: 148 LLDYEAMVAQLEHQFRLG------RLSIQGLWFYCQPMLGSMQAVSAVIHKASANNFTGS 201
L ++ A++A L+ Q R ++I+ + Q ++ +S+V++ +N
Sbjct: 285 LTNFLALIASLDSQIRADASLEKPMVTIRRCIAWTQVAKLKLRILSSVVN----DNMNQE 340
Query: 202 AVLNLLQSQAK-AMAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAED 260
L+Q +K + GD ++ L +K+ + ++E W+Y+G + DPY EFF+ E
Sbjct: 341 NKKRLIQVVSKYNVHGDPLIQELSDKILTEITGPLYEMIENWIYKGELVDPYQEFFVKEK 400
Query: 261 KSLLKESLTQDYDAK---YWRQRYSL-KDGIPSFLAN-IAGKILTTGKYLNVMRE-CGHS 314
S + D+ + W+ +Y L K+ IPSFL+ + KI GK LN R CG
Sbjct: 401 NG----SESHDHQGQGDVVWKGKYFLDKELIPSFLSEELVDKIFLIGKSLNFARYGCGDF 456
Query: 315 --AQVPTSENSKLLSFGSNHHYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLL 372
AQ + K LS+ H V AY + L+ L++E + L L++IK+YLLL
Sbjct: 457 DWAQEHYQKLVKKLSYRDPHSLETVVDKAYTESINHLVYLMEEVFHLTDHLKAIKKYLLL 516
Query: 373 DQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSL 432
QGDF+ M+ L + + + L + L+ A+RS+ A+ +P + +
Sbjct: 517 GQGDFVDLLMESLGNSLDQPANTLFRHNLTASLESAIRSSNASYEPEY-----------V 565
Query: 433 LKRMATLKGVEIKTSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFR 492
LKR+ D+ LE TG + F+L YKV P++++I+ +Y +F
Sbjct: 566 LKRL------------DARLLELSHGETGWDVFTLEYKVDSPINVIITPYCSRQYLKIFN 613
Query: 493 LLFHCKHVERQLCGAW-QVHQGARAF--NASGTAISRSSLLCR--SMLKFINSLLHYLTF 547
L+ K +E L +W +V+ G R N T + C M+ F+ L +Y+ F
Sbjct: 614 FLWRLKRIEFALAHSWRRVNLGERNVFRNLDYTKFEWHFVSCHLAEMIHFVCQLQYYILF 673
Query: 548 EVLEPNWHVMHNRLQTAK-SIDEVIQHHDFFLDKCLRECLL 587
EV+E +W + ++ ++D I+ H+ ++ + LL
Sbjct: 674 EVIEISWQELQLAMEKPNATLDTYIEAHEKYVTSITHKGLL 714
>sp|Q95ZG4|SPC98_DICDI Spindle pole body component 98 OS=Dictyostelium discoideum GN=spc98
PE=1 SV=2
Length = 813
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 153/303 (50%), Gaps = 28/303 (9%)
Query: 321 ENSKLLSFGSNHHYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVH 380
E +K L++ + E +++ +S LL ++ R+ M ++++K+YLLL QGDF+ +
Sbjct: 459 EKTKELNYINKEVLQEIIELVSRQSSERLLKIVLNRFKFMNHVKALKKYLLLGQGDFIQY 518
Query: 381 FMDIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLK 440
MD+ E+L+K +I KL +D A+R++ A E ++ R+
Sbjct: 519 LMDLIGEDLLKPTSQIQRHKLVGWMDTAIRNSNA-----------QFEEQDIVNRLDI-- 565
Query: 441 GVEIKTSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHV 500
++ E+P +I G + FSL Y V PL+ ++S + +Y+ +F ++ K V
Sbjct: 566 ---------ALLPERPGNI-GWDIFSLDYHVDTPLNTILSPNDILRYKKIFHFMWGIKRV 615
Query: 501 ERQLCGAWQVHQGARA---FNASGTAISRSSLLCRSMLKFINSLLHYLTFEVLEPNWHVM 557
E L W+ + + + + G I +S L+ M+ FI++ +YL FEVLE +W +
Sbjct: 616 EYSLASIWRKIRSSTSLSILSPIGGDIHKSHLIMNEMVHFISNFQYYLMFEVLECSWKNL 675
Query: 558 HNRL-QTAKSIDEVIQ-HHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQYAAATQWLIS 615
+ Q A +D++I+ HH + D C + L + + ++L S+ +++ LI+
Sbjct: 676 EKFIDQEATDLDQLIEAHHQYLQDICNKMFLSNSDSCYECFKKLLSIIIKFTLLQTKLIN 735
Query: 616 SSI 618
SI
Sbjct: 736 LSI 738
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/306 (19%), Positives = 129/306 (42%), Gaps = 58/306 (18%)
Query: 52 VQELLVIDDLLSALVGIEGRYISIKRRVNHVHGNDTYDSTVTFQVDASMDLALQEMAKRI 111
+ E L+I D++ GI+G YI ++ + ++ +T+ A + +++ R+
Sbjct: 104 IPEHLLIRDIIYVFQGIDGTYIKYNKQSDSFKIDENTSNTLVNGEPAYISKPKRDLVYRL 163
Query: 112 FPLCESFVLTGQFVESRSQFKNGLVNHAFAASLRALLLDYEAMVAQLEHQ---------- 161
F F+ + K GL N +F +++ L++ ++A LE Q
Sbjct: 164 CEFGWLFKKVRLFITNNDFKKTGLTNQSFCSAINDELIELYRIIAILETQVYKKFDMVNY 223
Query: 162 ----------------------------------FRLG-RLSIQGLWFYCQPMLGSMQAV 186
F G L++ L+ + Q L ++ +
Sbjct: 224 GGGGGGSGGSGSGSGLESPSSVSSGGTTTSTEIPFIDGDSLTLIRLFVWIQSPLKRLKVL 283
Query: 187 SAVIHKASANNFTGSAVLNLLQSQAKAMAGDNTVRSLLEKMTQCASNAYLGILERWVYEG 246
+ + + G +L+ + + +K GD +R L+ + ++ W+++G
Sbjct: 284 GTCVDSITVD-MKGGEILSKIDTLSKH--GDQDIRILIHNIMFKICQPLFSMIRLWMFKG 340
Query: 247 VIDDPYGEFFIAEDKSLLKESLTQDYDAKYWRQRYSL-KDGIPSFLA-NIAGKILTTGKY 304
I+DPY EFFI + +S+ E K W++++++ +PSF++ ++ +IL GK
Sbjct: 341 EINDPYQEFFIRQYESVQLE--------KTWKEKFAIVARLLPSFISLPLSKRILIIGKS 392
Query: 305 LNVMRE 310
+N M++
Sbjct: 393 INYMKQ 398
>sp|Q9M350|GCP4_ARATH Gamma-tubulin complex component 4 homolog OS=Arabidopsis thaliana
GN=At3g53760 PE=2 SV=2
Length = 745
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 115/520 (22%), Positives = 203/520 (39%), Gaps = 89/520 (17%)
Query: 189 VIHKASANNFTGSAVLNLLQSQAKAMAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVI 248
VI + ++ G +LN+L + G +R+ L+++ L W+ G++
Sbjct: 167 VILEIERDDIRGGQLLNVLNK--RCHCGVPELRTCLQRLLWNGHQVMYNQLAAWMVYGIL 224
Query: 249 DDPYGEFFIA--EDKSLLKESLTQDYDAKY------------WRQRYSLK-DGIPSFLAN 293
DP+GEFFI +D L S ++ K W + + D +P ++
Sbjct: 225 QDPHGEFFIKRQDDGDLDHRSSQEEVSEKLARTSVHETSLTDWHSGFHISLDMLPDYIPM 284
Query: 294 IAGK-ILTTGKYLNVMRECGHSAQ------------------------------------ 316
G+ IL GK + V+R + Q
Sbjct: 285 RLGESILFAGKAIRVLRNPSPAFQFQKDKSFQQTMRGSQRIRGFMHSDFPETETELDADL 344
Query: 317 -----VPTSENSKL------LSFGSNHHY--LEC-VKVAYEFASGELLNLIKERYDLMGK 362
+P SE K+ L S H EC V A+ L L+ R DL G
Sbjct: 345 TGGELLPQSEADKIEAMLKDLKESSEFHKRSFECTVDSVRAIAASHLWQLVVVRADLNGH 404
Query: 363 LRSIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEK-LQSLLDIALRSTAAAADPCHE 421
L+++K Y LL++GDF F++ +R+ + + T E L +A T A D
Sbjct: 405 LKALKDYFLLEKGDFFQCFLEESRQLMRLPPRQSTGESDLMVPFQLAATKTIAEEDKYFS 464
Query: 422 DLTCSVERSSLLKRMATLKGVEIKTS-SDSVDLEQPVSITGLETFSLSYKVQWPLSIVIS 480
++ + + R + V K S + +L S+ G + +L Y V WP+ + +
Sbjct: 465 RVSLRMPSFGVTVRSSQADMVRSKVSLTGKANLTSDTSVDGWDAIALEYSVDWPMQLFFT 524
Query: 481 RKALTKYQMVFRLLFHCKHVERQLCGAWQ--VHQG--------ARAFNASGTAISRSSL- 529
++ L+KY VF+ L K + +L +W +HQ N S + R +
Sbjct: 525 QEVLSKYLKVFQYLIRLKRTQMELEKSWASVMHQDHIESAQHRKDGLNGSTSQQRRQGIR 584
Query: 530 ---LCRSMLKF-INSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLREC 585
R + F I +L Y+ +V+E W V+ + ++ E++ H +L + +
Sbjct: 585 PMWRVREHMAFLIRNLQFYIQVDVIESQWKVLQTHIHDSQDFTELVGFHQEYLSALISQS 644
Query: 586 LLHLPDLLKKVERLKSLCLQYAAATQWLISSSIDLPKLEE 625
L + + + ++ + LCLQ+ W I + P E
Sbjct: 645 FLDIGSVSRILDSIMKLCLQFC----WNIENQESNPNTSE 680
>sp|Q9SC88|GCP4_MEDTR Gamma-tubulin complex component 4 homolog OS=Medicago truncatula
GN=85P PE=2 SV=1
Length = 739
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 140/652 (21%), Positives = 252/652 (38%), Gaps = 119/652 (18%)
Query: 67 GIEGRYISIKRRVNHVHGNDTYDSTVTFQV--DAS-MDLALQEMAKRIFPLCESFVLTGQ 123
G G I I RR N++ N TF++ D S +D + +E+ +RI L + +
Sbjct: 11 GYTGDLI-IDRRDNNLSANTPISDECTFKLAPDISFIDPSDRELIERIITLGFYYRELER 69
Query: 124 FVES-------RSQFKNGLVN--------HAFAASLRALLLDYEAMVAQLEHQFRLGRLS 168
F RS+ N L N A A + +L Y + + +E +
Sbjct: 70 FSAKSRNLNWIRSENANPLENKEKPSVYRRALANGIVEILAVYSSSILHIEQLLLSETMP 129
Query: 169 I-----QGLWFYCQPMLGSMQAVSAVIHKASANNFTGSAVLNLLQSQAKAMAGDNTVRSL 223
I QGL + + +I K + G +LNLL K G +++
Sbjct: 130 ILATVTQGL----NKFFSLLPPLYELILKIERGDIRGGELLNLLHK--KCHCGVPELQTC 183
Query: 224 LEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIA--EDKSLLKESLTQDYDAKY----- 276
++++ L W+ G+++D +GEFFI+ E + + S Q+ K
Sbjct: 184 IQRLLWHGHQVMYNQLASWMVYGILEDRHGEFFISRQEGRDVENSSSHQEISEKLSRLST 243
Query: 277 -------WRQRYSLK-DGIPSFLA-NIAGKILTTGKYLNVMRECGHS------------- 314
W + + D +P ++ +A IL GK + V+R S
Sbjct: 244 ADASLSDWHMGFHISLDMLPEYIPMRVAESILFAGKAVRVLRNPSPSFLSQDDVYPQEPK 303
Query: 315 ---------------------------AQVPTSENSKL------LSFGSNHHY--LEC-V 338
+P SE K+ L S H EC V
Sbjct: 304 RFPKIHGFEGRFNFQREPIINTGMRVEDLLPQSEADKIENMLLDLKESSEFHKRSFECAV 363
Query: 339 KVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQLDEITV 398
A+ L L+ R DL G L+++K Y LL +GDF F++ +R+ + + T
Sbjct: 364 DSIQAIAASHLWQLVVVRADLNGHLKALKDYFLLAKGDFFQCFLEESRQLMRLPPRQSTA 423
Query: 399 E-KLQSLLDIALRSTAAAADPCHEDLT-------CSVERSSLLKRMATLKGVEIKTSSDS 450
E L +A T D ++ +V+ S L AT + + +
Sbjct: 424 EADLMVPFQLASLKTIGEEDKYFSKVSLRMPSYGITVKPSLLNVPKATSAAADGISGASI 483
Query: 451 VDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQ- 509
+ +S+ G + +L Y ++WPL + +++ L++Y VF+ L K + +L W
Sbjct: 484 SNASSEMSVDGWDGIALEYSIEWPLHLFFTQEVLSRYLKVFQYLLRLKRTQMELEKLWAS 543
Query: 510 -VHQGARAFNASGTAISRSSLLC-------RSMLK-------FINSLLHYLTFEVLEPNW 554
+HQ F + + S + RSM + I +L Y+ +V+E W
Sbjct: 544 VMHQYHSIFAKNKKSDQDKSPITQQRDQRFRSMWRVREHMAFLIRNLQFYIQVDVIESQW 603
Query: 555 HVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQY 606
+++ + +Q + E++ H +L + + L + + + ++ + LCLQ+
Sbjct: 604 NILQSHIQDSHDFTELVGFHQEYLSALISQTFLDIGSVSRILDGIMKLCLQF 655
>sp|Q9UGJ1|GCP4_HUMAN Gamma-tubulin complex component 4 OS=Homo sapiens GN=TUBGCP4 PE=1
SV=1
Length = 667
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 116/521 (22%), Positives = 209/521 (40%), Gaps = 62/521 (11%)
Query: 133 NGLVNHAFAASLRALLLDYEAMVAQLEHQFRLG--RLSIQGLWFYCQPMLGSMQAVSAVI 190
+G+ AF L ++L Y + LE +F LG LSI + ++ +V V+
Sbjct: 82 HGIYLRAFCTGLDSVLQPYRQALLDLEQEF-LGDPHLSISHVNYFLDQFQLLFPSVMVVV 140
Query: 191 HKASANNFTGSAVLNLLQSQAKAMAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDD 250
+ + G +L + + G VRS LEK+ L W+ G++ D
Sbjct: 141 EQIKSQKIHGCQILETVYKHS--CGGLPPVRSALEKILAVCHGVMYKQLSAWMLHGLLLD 198
Query: 251 PYGEFFIAEDKSLLKESLTQDYD----------AKYWRQ------------------RYS 282
+ EFFI + S S + D K R+ ++S
Sbjct: 199 QHEEFFIKQGPSSGNVSAQPEEDEEDLGIGGLTGKQLRELQDLRLIEEENMLAPSLKQFS 258
Query: 283 LK-DGIPSFL-ANIAGKILTTGKYLNVMRECGHSAQVPTSENSKLL-----SFGSNHHYL 335
L+ + +PS++ +A KIL G+ + + + V + +L +F + H L
Sbjct: 259 LRVEILPSYIPVRVAEKILFVGESVQMFE----NQNVNLTRKGSILKNQEDTFAAELHRL 314
Query: 336 ------------ECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMD 383
+ V + L L+ E DL+G+L+ IK + LL +G+ F+D
Sbjct: 315 KQQPLFSLVDFEQVVDRIRSTVAEHLWKLMVEESDLLGQLKIIKDFYLLGRGELFQAFID 374
Query: 384 IAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVE 443
A+ L +T + + D L ++E + + E
Sbjct: 375 TAQHMLKTPPTAVTEHDVNVAFQQSAHKVLLDDDNLLPLLHLTIEYHGKEHKADATQARE 434
Query: 444 IKTSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQ 503
S ++ E P S G LSYKVQWPL I+ + L KY +VF+ L + V+ +
Sbjct: 435 -GPSRETSPREAPAS--GWAALGLSYKVQWPLHILFTPAVLEKYNVVFKYLLSVRRVQAE 491
Query: 504 LCGAWQVHQGARAFNASGTAISRSSLLCRSMLKF-INSLLHYLTFEVLEPNWHVMHNRLQ 562
L W + + ++ T + L R+ + F +++L +YL +VLE + + +++
Sbjct: 492 LQHCWALQMQRKHLKSNQTDAIKWRL--RNHMAFLVDNLQYYLQVDVLESQFSQLLHQIN 549
Query: 563 TAKSIDEVIQHHDFFLDKCLRECLLHLPDLLKKVERLKSLC 603
+ + + + HD FL L + + L + + + LC
Sbjct: 550 STRDFESIRLAHDHFLSNLLAQSFILLKPVFHCLNEILDLC 590
>sp|P38863|SPC97_YEAST Spindle pole body component SPC97 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SPC97 PE=1 SV=1
Length = 823
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 131/612 (21%), Positives = 242/612 (39%), Gaps = 124/612 (20%)
Query: 52 VQELLVIDDLLSALVGIEGRYISIKRRVNHVHGNDTYDSTVTFQVDASMDLALQEMAKRI 111
VQE LV+ DLL+ L+G+EG YI R N +D ++ + F++ MD + + ++RI
Sbjct: 54 VQEALVVKDLLNVLIGLEGTYI---RYFNDYEPSDP-ETPIEFKIAKKMDPSFKTFSRRI 109
Query: 112 FPLCESFVLTGQFVESRSQFKNGLVNHAFAASLRALLLDY--EAMVAQLEHQF-RLGRLS 168
+ +++ + E S G+V FA +R L D + +V +LE F ++ S
Sbjct: 110 VRYGKQYMILTRAYEKWSDTSFGMVLQRFAYEIRRFLEDVYLKTLVERLERDFNKVPNFS 169
Query: 169 IQGL--------------WFYCQPMLGSMQAVSAVIHKASANNFT--------------- 199
I+ L Y + +++S +F
Sbjct: 170 IRELEQIINETEVNKQMELLYNIYEEIFREIEERRTNQSSQEDFNNFMDSMKNESSLHLR 229
Query: 200 --------------GSAVLNLLQSQAKAMAGDNTVRSLLEKMTQCASNAYLGILERWVYE 245
G A+L + Q + GD + L+K+ S Y +L W+ +
Sbjct: 230 LMVAFDTTVYPVPKGGAILKIFQQKILENLGDRSSVMFLKKLLNNISQDYCTMLYEWLTQ 289
Query: 246 GVIDDPYGEFFIAEDKSLLKESL--TQD--YDAKYW-RQRYSLKDGIPSFLANIAGKILT 300
G+++DPY EF +D +++ T+D +D +Y+ R+ L+D N+ K+L
Sbjct: 290 GILNDPYQEFMTYDDLEGKTDNIFDTRDRAWDTQYFIRKDVLLRDCDSEEDKNLLFKMLR 349
Query: 301 TGKYLNVMRECGHSAQVPT-SENSKLLSF-----------GSNHHYLEC-VKVAYEFASG 347
TG L V+R S Q+PT NS ++ GSN LE V Y A+
Sbjct: 350 TGILLKVVRA---SLQIPTIPSNSSDITIQEINDFADLMEGSN---LELYVDKCYSRANE 403
Query: 348 ELLNLIKERYDLMGKLRSIK-------------RYLLLDQGDFLVHFM------------ 382
L L + YDL+ L+ ++ ++L + G+ H+
Sbjct: 404 IFLKLFFQGYDLINVLKHLQQIFLGYQSGHNVLKFLTKNMGELTKHYRNDNNANYDKLLQ 463
Query: 383 ------------DIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERS 430
++ R+ LM Q D T+ ++ S + + + ++D + + +
Sbjct: 464 NFELERQSENPNNLMRQLLMIQFDTETLPQVLSHY-LQIYPEVPENNSANDD-SDPLMHA 521
Query: 431 SLLKRMATLKGVEIKTSSDSV----DLEQPVSITGLETFSLSYKVQWPLSIVISRKALTK 486
+ K M + E+ +LE + + + +PL+I+ISR + K
Sbjct: 522 NNFKNMNAILFDELSKERTGAYHGSNLELYTPKSAIYHLKFDINIPYPLNIIISRTCMIK 581
Query: 487 YQMVFRLLFHCKHVERQLCGAWQVHQGARAFNASGTA-------ISRSSLLCRSMLKFIN 539
YQ++ R ++ R L W ++ G + + + +L M FI
Sbjct: 582 YQIILRYQLVLQYHSRLLDETWMDLNKTPSWKYRGYSHTVKRRIVRATRVLHAKMNHFIK 641
Query: 540 SLLHYLTFEVLE 551
+++ Y V++
Sbjct: 642 TIMEYFNQNVID 653
>sp|Q9D4F8|GCP4_MOUSE Gamma-tubulin complex component 4 OS=Mus musculus GN=Tubgcp4 PE=2
SV=2
Length = 667
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 115/520 (22%), Positives = 209/520 (40%), Gaps = 60/520 (11%)
Query: 133 NGLVNHAFAASLRALLLDYEAMVAQLEHQFRLG-RLSIQGLWFYCQPMLGSMQAVSAVIH 191
+G+ AF L ++L Y + LE +F LSI + + +V V+
Sbjct: 82 HGIYLRAFCTGLDSVLQPYRQALLDLEQEFLADPHLSISHVNYSLDQFQLLFPSVMVVVE 141
Query: 192 KASANNFTGSAVLNLLQSQAKAMAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDP 251
+ + G +L + + G VRS LEK+ L W+ G++ D
Sbjct: 142 QIKSQKIHGCQILETVYKHS--CGGLPPVRSALEKILAVCHGVMYKQLSAWMLHGLLLDQ 199
Query: 252 YGEFFIAEDKS--LLKESLTQDYD--------AKYWRQ------------------RYSL 283
+ EFFI + S L L +D + K R+ ++SL
Sbjct: 200 HEEFFIKQGPSSGTLSAQLEEDEEDLGIGGLTGKQLRELQDLRLIEEENMLAPSLKQFSL 259
Query: 284 K-DGIPSFL-ANIAGKILTTGKYLNVMRECGHSAQVPTSENSKLL-----SFGSNHHYL- 335
+ + +PS++ +A KIL G+ + + + V + +L +F + H L
Sbjct: 260 RVEILPSYIPVRVAEKILFVGESVQMFE----NQNVNLTRKGSILKNQEDTFAAELHRLK 315
Query: 336 -----------ECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDI 384
+ V + L L+ E DL+G+L+ IK + LL +G+ F+D
Sbjct: 316 QQPLFSLVDFEQVVDRIRSTVAEHLWKLMVEESDLLGQLKIIKDFYLLGRGELFQAFIDT 375
Query: 385 AREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEI 444
A+ L +T + + D L ++E + + E+
Sbjct: 376 AQHMLKTPPTAVTEHDVNVAFQQSAHKVLLDDDNLLPLLHLTIEYHGKDHKADATQPREV 435
Query: 445 KTSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQL 504
S ++ E P S G LSYKVQWPL I+ + L KY +VF+ L + V+ +L
Sbjct: 436 -PSRETSPREAPSS--GWAALGLSYKVQWPLHILFTPAVLEKYNVVFKYLLSVRRVQAEL 492
Query: 505 CGAWQVHQGARAFNASGTAISRSSLLCRSMLKF-INSLLHYLTFEVLEPNWHVMHNRLQT 563
W + + ++ T + L R+ + F +++L +YL +VLE + + +++ +
Sbjct: 493 QHCWALQMQRKHLKSNQTDAVKWRL--RNHMAFLVDNLQYYLQVDVLESQFSQLLHQINS 550
Query: 564 AKSIDEVIQHHDFFLDKCLRECLLHLPDLLKKVERLKSLC 603
+ + + HD FL L + + L + + + LC
Sbjct: 551 TRDFESIRLAHDHFLSNLLAQSFILLKPVFHCLNEILDLC 590
>sp|Q9VKU7|GCP4_DROME Gamma-tubulin complex component 4 homolog OS=Drosophila
melanogaster GN=Grip75 PE=1 SV=2
Length = 650
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 116/508 (22%), Positives = 213/508 (41%), Gaps = 102/508 (20%)
Query: 141 AASLRALLLDYEAMVAQLEHQFRLG--RLSIQGLW--FYCQ-PMLGSMQAVSAVIHKASA 195
A + L +Y A + +LE ++ LG R S+ ++ Y + P+L M+ + IH
Sbjct: 83 AKGIEMALEEYYAEIGRLE-KYCLGNERNSLSYVYNALYAKFPLLVFMRNLITEIHVL-- 139
Query: 196 NNFTGSAVLNLLQSQAKAMAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEF 255
N G +L+ L Q + GD + ++ + + NA+ L W+ GVIDD + EF
Sbjct: 140 -NLRGCVLLHNLHQQCEH--GDIQLEKAIKIIMKPVKNAFFSSLAHWLLFGVIDDVHSEF 196
Query: 256 FI------AEDKSLLKESLT----------QDYDAKYWRQRYSLKDGIPSFLANI-AGKI 298
FI A D S +S T +DY W+ ++ +P F + + A K+
Sbjct: 197 FIKFTPTDAVDGSSFSKSATCSLLSAEKNPEDY---IWQYEVNMSQ-LPGFFSIVLAEKV 252
Query: 299 LTTGKYLNVMRECGHSAQVPTSEN---SKLLSFGSNHHYL-------ECVKVAYEFASGE 348
L G+ + V + G + +V + +KL S+ Y E K+ + ++ +
Sbjct: 253 LFVGQTVLVFK-MGRNVKVKNKTDPLAAKLAELDSDDIYQLWSGRESEFFKMVVDLSNED 311
Query: 349 LLNLIK---------------------ERYDLMGKLRSIKRYLLLDQGDFLVHF------ 381
+N+ + DL ++ IK + LL +G+F + F
Sbjct: 312 TINVFRLEKVIIDIKNYVSARLSEIAVNEVDLERQMGLIKDFFLLGRGEFYLEFCSQMVG 371
Query: 382 -MDIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLK 440
M+ REE K + RS AA +T +++ SL+ + +T
Sbjct: 372 TMETYREERFKNVT---------------RSFELAATVT--GITDDLDKFSLICQRST-- 412
Query: 441 GVEIKTSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHV 500
D+ D L+ SL Y+ +WPL+++ S + +Y +FR L +
Sbjct: 413 ----SEPDDTSDF------NFLQGLSLKYEYEWPLNLLFSPTTIERYNNIFRFLLIIRTY 462
Query: 501 ERQLCGAWQVHQGARAFNASGTAISRSSLLCRSMLK-FINSLLHYLTFEVLEPNWHVMHN 559
+ ++ W Q RA +A + + R+ L F+N++ +Y+ +VLE + ++ N
Sbjct: 463 QYEIQRVW-AKQTWRAKSAKDVPPNNKIITLRNYLMFFLNNMQYYIQVDVLESQFGILMN 521
Query: 560 RLQTAKSIDEVIQHHDFFLDKCLRECLL 587
+++ + + + H FL L C L
Sbjct: 522 VIKSRSDFEVIQRAHTVFLANVLSHCFL 549
>sp|Q96RT7|GCP6_HUMAN Gamma-tubulin complex component 6 OS=Homo sapiens GN=TUBGCP6 PE=1
SV=3
Length = 1819
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 116/297 (39%), Gaps = 47/297 (15%)
Query: 129 SQFKNGLVNHAFAASLRALLLDYEAMVAQLEHQFRLGRLSIQGLWF--------YCQPML 180
S + GLV AF + LR L Y A V L L L+I G F Y +
Sbjct: 421 SLYSKGLVFQAFTSGLRRYLQYYRACV--LSTPPTLSLLTI-GFLFKKLGRQLRYLAELC 477
Query: 181 GSMQAVSAVIHKASANNF-TGSAVLNLLQSQAKAMAGDNTVRSLLEKMTQCASNAYLGIL 239
G + F TG +L+ L +A + LL + + + Y +
Sbjct: 478 GVGAVLPGTCGGGPRAAFPTGVKLLSYLYQEALHNCSNEHYPVLL-SLLKTSCEPYTRFI 536
Query: 240 ERWVYEGVIDDPYGEFFIAEDKSLLKESLTQDYDAKYWRQRYSL-----KDGIPSFLANI 294
WVY GV D YGEF I + L D YW Y L +D +P FL +I
Sbjct: 537 HDWVYSGVFRDAYGEFMIQVNHEYLSFR-----DKLYWTHGYVLISKEVEDCVPVFLKHI 591
Query: 295 AGKILTTGKYLNVMRECGHSAQVPTSENSKLLSFGSNHHYL-----ECVKVAYEFASGEL 349
A I GK +N+++ C HYL +++ F+ EL
Sbjct: 592 AHDIYVCGKTINLLKLC------------------CPRHYLCWSDVPVPRISVIFSLEEL 633
Query: 350 LNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLD 406
+ K+ +G++ + R+ + + + + M+IA++EL+ E L +L D
Sbjct: 634 KEIEKDCAVYVGRMERVARHSSVSKEEKELR-MEIAKQELIAHAREAASRVLSALSD 689
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 97/229 (42%), Gaps = 27/229 (11%)
Query: 365 SIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPC--HED 422
+++ +LL++ G+F D+ E+L + E L L+ L S + A C H D
Sbjct: 1519 ALRHFLLMEDGEFAQSLSDLLFEKLGA--GQTPGELLNPLV---LNSVLSKALQCSLHGD 1573
Query: 423 LTCSVERSSLLKRMATLKGVEIKTSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRK 482
+ S LK + ++ P + L L YKV WPL+IVI+
Sbjct: 1574 TPHASNLSLALKYLP--------------EVFAPNAPDVLSCLELRYKVDWPLNIVITEG 1619
Query: 483 ALTKYQMVFRLLFHCKHVE---RQLCGAWQVHQGARAFNASGTAISRS-SLLCRSMLKFI 538
++KY VF L K + + +C + + + A + +G+ R L M F+
Sbjct: 1620 CVSKYSGVFSFLLQLKLMMWALKDVC--FHLKRTALLSHMAGSVQFRQLQLFKHEMQHFV 1677
Query: 539 NSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLL 587
+ Y+ ++L W RL T ++E+ + H +L K + LL
Sbjct: 1678 KVIQGYIANQILHVTWCEFRARLATVGDLEEIQRAHAEYLHKAVFRGLL 1726
>sp|Q95K09|GCP5_MACFA Gamma-tubulin complex component 5 (Fragment) OS=Macaca fascicularis
GN=TUBGCP5 PE=2 SV=2
Length = 725
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 120/304 (39%), Gaps = 53/304 (17%)
Query: 331 NHHYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELM 390
+ YL+C G L+ +K+ Y L+ L++++ + L++ GD + F +
Sbjct: 397 DKQYLDCC--------GNLMQTLKKDYRLVEYLQAMRNFFLMEGGDTMYDFYT----SIF 444
Query: 391 KQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEIKTSSDS 450
++ E + S L++ L+ P E SS L + + V D+
Sbjct: 445 DKIREKETWQNVSFLNVQLQEAVGQRYP---------EDSSRLS--ISFENV------DT 487
Query: 451 VDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLC----- 505
+ PV I L+ +LSYKV WP+ IVIS + Y VF LL K + L
Sbjct: 488 AKKKLPVHI--LDGLTLSYKVPWPVDIVISLECQKIYNQVFLLLLQIKWAKYSLDVLLFG 545
Query: 506 -------------GAWQVHQGARAFNASGTA----ISRSSLLCRSMLKFINSLLHYLTFE 548
G + F I R LL ++ F+NSL +Y+
Sbjct: 546 ELVSTAEKPRLQEGLVREQDTVAQFGPQKEPVRQQIHRMFLLRVKLMHFVNSLHNYIMTR 605
Query: 549 VLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQYAA 608
+L ++++ AK +D++I+ H +L CLL K +K L L
Sbjct: 606 ILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNLALMF 665
Query: 609 ATQW 612
A W
Sbjct: 666 ADGW 669
>sp|Q96RT8|GCP5_HUMAN Gamma-tubulin complex component 5 OS=Homo sapiens GN=TUBGCP5 PE=1
SV=1
Length = 1024
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 119/304 (39%), Gaps = 53/304 (17%)
Query: 331 NHHYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELM 390
+ YL+C G L+ +K+ Y L+ L++++ + L++ GD + F +
Sbjct: 696 DKQYLDCC--------GNLMQTLKKDYRLVEYLQAMRNFFLMEGGDTMYDFY----TSIF 743
Query: 391 KQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEIKTSSDS 450
++ E + S L++ L+ P E SS L + + V D+
Sbjct: 744 DKIREKETWQNVSFLNVQLQEAVGQRYP---------EDSSRLS--ISFENV------DT 786
Query: 451 VDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLC----- 505
+ PV I L+ +LSYKV WP+ IVIS + Y VF LL K + L
Sbjct: 787 AKKKLPVHI--LDGLTLSYKVPWPVDIVISLECQKIYNQVFLLLLQIKWAKYSLDVLLFG 844
Query: 506 -------------GAWQVHQGARAFNASGTA----ISRSSLLCRSMLKFINSLLHYLTFE 548
G F I R LL ++ F+NSL +Y+
Sbjct: 845 ELVSTAEKPRLKEGLIHEQDTVAQFGPQKEPVRQQIHRMFLLRVKLMHFVNSLHNYIMTR 904
Query: 549 VLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQYAA 608
+L ++++ AK +D++I+ H +L CLL K +K L L
Sbjct: 905 ILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNLALMF 964
Query: 609 ATQW 612
A W
Sbjct: 965 ADGW 968
>sp|Q8BKN5|GCP5_MOUSE Gamma-tubulin complex component 5 OS=Mus musculus GN=Tubgcp5 PE=2
SV=2
Length = 1024
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 120/304 (39%), Gaps = 53/304 (17%)
Query: 331 NHHYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELM 390
+ YL C G L+ +K + L+ L++++ + L++ GD + F +
Sbjct: 696 DKQYLHCC--------GNLMQTLKRDFRLVEYLQAMRNFFLMEGGDTMYDFY----TSIF 743
Query: 391 KQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEIKTSSDS 450
++ E + S L++ L+ P + L S+ ++ D+
Sbjct: 744 DKIREKETWQNVSFLNVQLQEAVGQRYP-EDSLRLSISFENV----------------DT 786
Query: 451 VDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVER-------- 502
+ PV I L+ +LSYKV WP+ IVIS + Y VF LL K +
Sbjct: 787 TKKKLPVHI--LDGLTLSYKVPWPVDIVISVECQKIYNQVFLLLLQIKWAKYSLDVLLFG 844
Query: 503 QLCGAWQVHQGAR----------AFNASGTA----ISRSSLLCRSMLKFINSLLHYLTFE 548
+L A + Q F + I R LL ++ F+NSL +Y+
Sbjct: 845 ELGNAAERSQAKEDIPRDQDTPSQFGPPKESLRQQIHRMFLLRVKLMHFVNSLHNYIMTR 904
Query: 549 VLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQYAA 608
+L ++++ AK +D++I+ H +L CLL K +K L L
Sbjct: 905 ILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNLALMF 964
Query: 609 ATQW 612
A W
Sbjct: 965 AEGW 968
>sp|P53540|SPC98_YEAST Spindle pole body component SPC98 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SPC98 PE=1 SV=1
Length = 846
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 159/387 (41%), Gaps = 53/387 (13%)
Query: 204 LNLLQSQAKAMAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDKSL 263
LN+ +S GD T+R + + + Y L W+ +G++ YGEFFIAE+
Sbjct: 316 LNIFKSH-----GDLTIRKIATNLFNSMISLYYEYLMNWLTKGLLRATYGEFFIAEN--- 367
Query: 264 LKESLTQDYDAKYWRQRYSLKDGIPSFLAN-IAGKILTTGK-YLNVMRECGHSAQVPTSE 321
++ D D Y ++ +P+F+ +A KI GK Y+ + + C T+E
Sbjct: 368 -TDTNGTDDDFIYHIPIEFNQERVPAFIPKELAYKIFMIGKSYIFLEKYCKEVQW--TNE 424
Query: 322 NSKLLSF--------GSNHHYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLD 373
SK G + ++ E + Y ++ +++ + ++K LL+
Sbjct: 425 FSKKYHVLYQSNSYRGISTNFFEIINDQYSEIVNHTNQILNQKFHYRDVVFALKNILLMG 484
Query: 374 QGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLL 433
+ DF+ ++ A + L D + KL +L A V+ SSL
Sbjct: 485 KSDFMDALIEKANDILATPSDSLPNYKLTRVLQEA------------------VQLSSLR 526
Query: 434 KRMATLKGVEIKTSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRK---ALTKYQMV 490
M + + + D+ L+ G + F+L Y + PLS+V++ +Y +
Sbjct: 527 HLMNSPRNSSVINGLDARVLDLGHGSVGWDVFTLDYILYPPLSLVLNVNRPFGRKEYLRI 586
Query: 491 FRLLFHCKH----VERQLCGAWQV---HQGARAFNA----SGTAISRSSLLCRSMLKFIN 539
F L+ K ++++ + + + R +N +SR S+L +F +
Sbjct: 587 FNFLWRFKKNNYFYQKEMLKSNDIIRSFKKIRGYNPLIRDIINKLSRISILRTQFQQFNS 646
Query: 540 SLLHYLTFEVLEPNWHVMHNRLQTAKS 566
+ Y ++E N+ M +LQ ++
Sbjct: 647 KMESYYLNCIIEENFKEMTRKLQRTEN 673
>sp|O67615|SRP54_AQUAE Signal recognition particle protein OS=Aquifex aeolicus (strain
VF5) GN=ffh PE=3 SV=1
Length = 454
Score = 36.2 bits (82), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Query: 279 QRYSLKDGIPSFLA-NIAGKILTTGKYLNVMRECGHSAQVPTSENSKLLSFGSNHHYLEC 337
++ LK G F+ GK T GK N++++ GH V +++ + + E
Sbjct: 89 EKADLKKGTVLFVGLQGTGKTTTIGKIANLLKKGGHKVAVSSTDLRRPAAMLQLQRLAER 148
Query: 338 VKVA-YEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQLDEI 396
V V YEF G I R K S+ YLLLD L H EELMK+L EI
Sbjct: 149 VGVPYYEFEEGLGAVEIARRAVKRAKEESVD-YLLLDTAGRL-H----VDEELMKELQEI 202
>sp|P30153|2AAA_HUMAN Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A
alpha isoform OS=Homo sapiens GN=PPP2R1A PE=1 SV=4
Length = 589
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 113/296 (38%), Gaps = 50/296 (16%)
Query: 125 VESRSQFKNGLVNHAFAASLRALLLDYEAMVAQLEHQF-----RLG-------RLSIQGL 172
+ES + + +V SLRA+ +E + LE F RL R S GL
Sbjct: 93 LESLATVEETVVRDKAVESLRAI--SHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGL 150
Query: 173 WFYCQPMLGSMQAVSAVIHKASAN------NFTGSAVLNLLQSQAKAMAGDNTVRSLLEK 226
+ C P + S AV A + + N A + L AK + DN ++
Sbjct: 151 FSVCYPRVSS--AVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPM 208
Query: 227 MTQCASNAYLGILERWVYEGVIDDPYGEFFIAED-KSLLKESLTQDYDAKYWRQRYSLKD 285
+ AS+ + E ++ + ED ++L+ +L Q + K WR RY + D
Sbjct: 209 FSNLASDEQDSV-RLLAVEACVN--IAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVAD 265
Query: 286 GIPSFLANIAGKILTTG---KYLNVMRECGHSAQVPTSENSKLLSFGSN----------- 331
+ +I T + N+M++C A+V + + K+ F N
Sbjct: 266 KFTELQKAVGPEITKTDLVPAFQNLMKDC--EAEVRAAASHKVKEFCENLSADCRENVIM 323
Query: 332 HHYLECVKV----AYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMD 383
L C+K A + L ++I ++GK +I+ L L FL D
Sbjct: 324 SQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPL----FLAQLKD 375
>sp|P54612|2AAA_PIG Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A
alpha isoform OS=Sus scrofa GN=PPP2R1A PE=2 SV=2
Length = 589
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 113/296 (38%), Gaps = 50/296 (16%)
Query: 125 VESRSQFKNGLVNHAFAASLRALLLDYEAMVAQLEHQF-----RLG-------RLSIQGL 172
+ES + + +V SLRA+ +E + LE F RL R S GL
Sbjct: 93 LESLATVEETVVRDKAVESLRAI--SHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGL 150
Query: 173 WFYCQPMLGSMQAVSAVIHKASAN------NFTGSAVLNLLQSQAKAMAGDNTVRSLLEK 226
+ C P + S AV A + + N A + L AK + DN ++
Sbjct: 151 FSVCYPRVSS--AVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPM 208
Query: 227 MTQCASNAYLGILERWVYEGVIDDPYGEFFIAED-KSLLKESLTQDYDAKYWRQRYSLKD 285
+ AS+ + E ++ + ED ++L+ +L Q + K WR RY + D
Sbjct: 209 FSNLASDEQDSV-RLLAVEACVN--IAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVAD 265
Query: 286 GIPSFLANIAGKILTTG---KYLNVMRECGHSAQVPTSENSKLLSFGSN----------- 331
+ +I T + N+M++C A+V + + K+ F N
Sbjct: 266 KFTELQKAVGPEITKTDLVPAFQNLMKDC--EAEVRAAASHKVKEFCENLSADCRENVIM 323
Query: 332 HHYLECVKV----AYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMD 383
L C+K A + L ++I ++GK +I+ L L FL D
Sbjct: 324 TQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPL----FLAQLKD 375
>sp|Q76MZ3|2AAA_MOUSE Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A
alpha isoform OS=Mus musculus GN=Ppp2r1a PE=1 SV=3
Length = 589
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 113/296 (38%), Gaps = 50/296 (16%)
Query: 125 VESRSQFKNGLVNHAFAASLRALLLDYEAMVAQLEHQF-----RLG-------RLSIQGL 172
+ES + + +V SLRA+ +E + LE F RL R S GL
Sbjct: 93 LESLATVEETVVRDKAVESLRAI--SHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGL 150
Query: 173 WFYCQPMLGSMQAVSAVIHKASAN------NFTGSAVLNLLQSQAKAMAGDNTVRSLLEK 226
+ C P + S AV A + + N A + L AK + DN ++
Sbjct: 151 FSVCYPRVSS--AVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPM 208
Query: 227 MTQCASNAYLGILERWVYEGVIDDPYGEFFIAED-KSLLKESLTQDYDAKYWRQRYSLKD 285
+ AS+ + E ++ + ED ++L+ +L Q + K WR RY + D
Sbjct: 209 FSNLASDEQDSV-RLLAVEACVN--IAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVAD 265
Query: 286 GIPSFLANIAGKILTTG---KYLNVMRECGHSAQVPTSENSKLLSFGSN----------- 331
+ +I T + N+M++C A+V + + K+ F N
Sbjct: 266 KFTELQKAVGPEITKTDLVPAFQNLMKDC--EAEVRAAASHKVKEFCENLSADCRENVIM 323
Query: 332 HHYLECVKV----AYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMD 383
L C+K A + L ++I ++GK +I+ L L FL D
Sbjct: 324 TQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPL----FLAQLKD 375
>sp|Q32PI5|2AAA_BOVIN Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A
alpha isoform OS=Bos taurus GN=PPP2R1A PE=1 SV=1
Length = 589
Score = 34.3 bits (77), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 113/296 (38%), Gaps = 50/296 (16%)
Query: 125 VESRSQFKNGLVNHAFAASLRALLLDYEAMVAQLEHQF-----RLG-------RLSIQGL 172
+ES + + +V SLRA+ +E + LE F RL R S GL
Sbjct: 93 LESLATVEETVVRDKAVESLRAI--SHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGL 150
Query: 173 WFYCQPMLGSMQAVSAVIHKASAN------NFTGSAVLNLLQSQAKAMAGDNTVRSLLEK 226
+ C P + S AV A + + N A + L AK + DN ++
Sbjct: 151 FSVCYPRVSS--AVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPM 208
Query: 227 MTQCASNAYLGILERWVYEGVIDDPYGEFFIAED-KSLLKESLTQDYDAKYWRQRYSLKD 285
+ AS+ + E ++ + ED ++L+ +L Q + K WR RY + D
Sbjct: 209 FSNLASDEQDSV-RLLAVEACVN--IAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVAD 265
Query: 286 GIPSFLANIAGKILTTG---KYLNVMRECGHSAQVPTSENSKLLSFGSN----------- 331
+ +I T + N+M++C A+V + + K+ F N
Sbjct: 266 KFTELHKAVGPEITKTDLVPAFQNLMKDC--EAEVRAAASHKVKEFCENLSADCRENVIM 323
Query: 332 HHYLECVKV----AYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMD 383
L C+K A + L ++I ++GK +I+ L L FL D
Sbjct: 324 TQILPCIKELVSDANQHVKSALASVIMGLSPILGKDSTIEHLLPL----FLAQLKD 375
>sp|A5GFT6|TSH2_PIG Teashirt homolog 2 OS=Sus scrofa GN=TSHZ2 PE=2 SV=1
Length = 1035
Score = 33.1 bits (74), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 82/196 (41%), Gaps = 25/196 (12%)
Query: 279 QRYSLKDGIPSFLANIAGKILTTGK--YLNVMRECGHSAQV-------PTSENSKL-LSF 328
Q+ LK+ +P+ I+ K++T K +V R C + P +N+ L LS
Sbjct: 302 QKVPLKEPVPT----ISSKMVTPAKKRVFDVNRPCSPDSTTGSFADPFPAPKNASLQLSS 357
Query: 329 GSNHHYLECVKVAYEFAS--GELLNLIK--ERYDLMGKLRSIKRYLLLDQGDFLVHFMDI 384
+ + Y ++F + ++L ++ +D + +L + ++ G FL
Sbjct: 358 NNRYGYQNGASYTWQFEACKSQILKCMECGSSHDTLQQLTT----HMMVTGHFLKVTSSA 413
Query: 385 AREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEI 444
+++ LD + VEK+QSL D + A + C+ + L + K E+
Sbjct: 414 SKKGKQLVLDPLAVEKMQSLSDAPSSDSLAPKPSSNSASDCTASTTELKRESKKEKPEEL 473
Query: 445 KTSS---DSVDLEQPV 457
+T S D E P+
Sbjct: 474 RTDEKVLKSEDYEDPL 489
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 221,447,413
Number of Sequences: 539616
Number of extensions: 8753491
Number of successful extensions: 21008
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 20897
Number of HSP's gapped (non-prelim): 57
length of query: 662
length of database: 191,569,459
effective HSP length: 124
effective length of query: 538
effective length of database: 124,657,075
effective search space: 67065506350
effective search space used: 67065506350
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)