Query 006085
Match_columns 662
No_of_seqs 153 out of 721
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 15:33:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006085.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006085hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ksi_A Copper amine oxidase; P 100.0 5E-189 2E-193 1591.3 70.8 636 21-658 2-642 (642)
2 3sxx_A Peroxisomal primary ami 100.0 1E-188 4E-193 1587.2 66.2 625 19-654 20-664 (692)
3 3loy_A Copper amine oxidase; T 100.0 3E-186 1E-190 1559.2 67.7 611 21-651 1-633 (633)
4 1w6g_A Phenylethylamine oxidas 100.0 5E-183 2E-187 1539.8 64.0 612 20-653 6-629 (646)
5 1spu_A Copper amine oxidase; o 100.0 9E-178 3E-182 1521.1 67.7 616 21-651 93-726 (727)
6 1w7c_A Lysyl oxidase; AMNE oxi 100.0 8E-162 3E-166 1380.4 57.8 600 18-650 15-692 (747)
7 1tu5_A Copper amine oxidase, l 100.0 7E-162 2E-166 1382.6 55.5 608 19-650 38-705 (746)
8 3hi7_A Amiloride-sensitive ami 100.0 8E-153 3E-157 1302.1 63.1 608 21-651 10-694 (731)
9 3pgb_A Putative uncharacterize 100.0 1E-151 3E-156 1294.6 59.9 610 16-650 60-736 (797)
10 2cs7_A Pneumococcal histidine 24.8 26 0.0009 27.5 1.3 26 15-40 28-54 (55)
No 1
>1ksi_A Copper amine oxidase; PEA seedling, oxidoreductase; HET: TPQ NAG; 2.20A {Pisum sativum} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 PDB: 1w2z_A*
Probab=100.00 E-value=5.1e-189 Score=1591.34 Aligned_cols=636 Identities=55% Similarity=1.001 Sum_probs=601.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCC--CCCeEEEEEEccCCChHHhhhhhccC-CCCCCcEEEEEEEeCCeEEEEEEECCC
Q 006085 21 RHPLDSLRPSEFTRVQTIVKTSYP--SNNLSFHYVGMDEPDKAVVYSWLSNS-KTKFPRRAIVIARHNHQTHEIIVDLSK 97 (662)
Q Consensus 21 ~HPldpLt~~Ei~~a~~il~~~~~--~~~~~f~~i~L~EP~K~~vl~~l~~~-~~~p~R~A~vv~~~~~~~~e~vV~L~~ 97 (662)
+|||||||++||++|++||+++.+ ...++|++|+|+||+|++|++||+.. +++|+|+|+|+++.+++++|++|+|++
T Consensus 2 ~HPldpLs~~Ei~~a~~iv~~~~~~~~~~~~F~~i~L~EP~K~~v~~~l~~~~~~~P~R~A~vv~~~~~~~~E~vV~L~~ 81 (642)
T 1ksi_A 2 QHPLDPLTKEEFLAVQTIVQNKYPISNNRLAFHYIGLDDPEKDHVLRYETHPTLVSIPRKIFVVAIINSQTHEILINLRI 81 (642)
T ss_dssp CSTTCCCCHHHHHHHHHHHHHHSCTTTCCEEEEEEEECCCCHHHHHHHHHCGGGCCCCCEEEEEEEETTEEEEEEEETTT
T ss_pred CCCCCCCCHHHHHHHHHHHHhcccCCCCceEEEEEECCCCCHHHHHHHHhhcCCCCCCcEEEEEEEeCCeEEEEEEECCC
Confidence 699999999999999999999875 36788999999999999999998533 357899999999999999999999999
Q ss_pred CeEEEEEeecCCCcCCCCHHHHHHHHHHHhcChHHHHHHHhcCCCCCceEEccccccccCCCCCeeEEEEEEEEeeCCCC
Q 006085 98 RSIVSDKVYTGHGFPLLTLEEQHAGAALVLAYEPFKASVKKRGLNISDVVCSASTVGWYGEKKSKRVLKFPCFYTDQGTI 177 (662)
Q Consensus 98 ~~v~~~~~~~~~~~p~~~~~e~~~~e~~~~~~p~~~~~~~~~gi~~~~v~~d~w~~G~~~~~~~rRl~~~~~~~~~~~~~ 177 (662)
+++++++..+..+||+++.+|+.++++++++||.|+++|+++||++..|+|+||++|+++..++||++|++||++ .+++
T Consensus 82 ~~v~~~~~~~~~g~p~~~~~E~~~~e~~~~~~p~~~~~~~~~gl~~~~v~~~pw~~g~~~~~~~~Rl~~~~~~~~-~~~~ 160 (642)
T 1ksi_A 82 RSIVSDNIHNGYGFPILSVDEQSLAIKLPLKYPPFIDSVKKRGLNLSEIVCSSFTMGWFGEEKNVRTVRLDCFMK-ESTV 160 (642)
T ss_dssp TEEEEEEECCSSCBCCCCHHHHHHHTTGGGGCHHHHHHHHHTTCCGGGEEEEEECCCCCSCSCCCCEEEEEEEEC-SSCS
T ss_pred CcEEEEEeccCCCcCCCCHHHHHHHHHHhhcCHHHHHHHHhcCCCccceEEecccccCCCCCCCcEEEEEEEEEe-cCCC
Confidence 999887666655699999999999999999999999999999999899999999999887655799999999999 6789
Q ss_pred CcccCcCCCeEEEEecCCcEEEEEeCCccccCCCCCCCCCCcCCCCCCCCCCCCCceeec-cCCeEEEeceEEEeeceEE
Q 006085 178 NMFLRPIEGITIVVDIEEMKVTEYNDREVAPIPKPEPTEYRLSKLKPPFGPRLNSVATSS-TRPGFKINGNTVKWANWVF 256 (662)
Q Consensus 178 n~Ya~Pl~g~~~~vD~~~~~vv~i~d~~~~~~p~~~~~~y~~~~~~~~~r~~~kP~~i~q-eG~sf~v~g~~V~W~~W~f 256 (662)
|+|+||||||+++||+.++||++|+|.+.+++|+.++.+|++..+.+++|+++||++|+| ||+||+|+|++|+||||+|
T Consensus 161 n~Ya~Pl~Gl~~vvD~~~~~V~~i~d~~~~~~p~~~~~~y~~~~~~~~~r~~lkP~~i~QPeG~sF~V~G~~V~W~~W~f 240 (642)
T 1ksi_A 161 NIYVRPITGITIVADLDLMKIVEYHDRDIEAVPTAENTEYQVSKQSPPFGPKQHSLTSHQPQGPGFQINGHSVSWANWKF 240 (642)
T ss_dssp CGGGSEECSEEEEEETTTTEEEEEEECCCCCCCCCTTCCCCSTTCCSCCCCCCCCBEEECTTCCSCEEETTEEEETTEEE
T ss_pred cccccccCceEEEEECCCCEEEEEEccCCccCCCCCCCCccccccCCCCCCCCCCceecCCCCCCEEEeCcEEeeCCceE
Confidence 999999999999999999999999988777888777778998776667799999999999 9999999999999999999
Q ss_pred EEEecCCcceEEEeeEEecCCCCeEeEEEEeeeceeEEeecCCCCCcccceeeeecCCCCcccCCcCCCCCCCCCCccEE
Q 006085 257 NVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVF 336 (662)
Q Consensus 257 ~vgf~~reGl~L~dv~~~d~~~~~~r~I~yrlsl~Em~vpYgdp~~~~~~k~~~D~geyG~G~~a~~L~~G~DCpg~~~Y 336 (662)
|||||+||||+||||+|+|.+.|++||||||+|||||+||||||+++|++|+|||+||||+|.+||+|++||||||+|+|
T Consensus 241 ~vgf~~reGlvL~dv~y~d~~~g~~r~V~YrlSl~Em~VPYgdP~~~~~~k~~fD~GeyG~G~~a~~L~~GcDCpg~i~Y 320 (642)
T 1ksi_A 241 HIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQDPTEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQF 320 (642)
T ss_dssp EEEEETTTEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEBCCCSTTTTTCEECHHHHHCTTTTBCCCCBTTTBCTTCEE
T ss_pred EEecCCCcccEEEEEEEecCCCCCceEEEEEeeeeeEEEeCCCCCcccccceeeeccccCccccccccccCCCCCCCCEE
Confidence 99999999999999999998888999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEeecCCCceeEeCceEEEEEeeCCCceecccccCCCCc-eeecccceEEEEEEEEEecccceEEEEEEecCccEEEE
Q 006085 337 MDGYFASQDGTPVKTPNAVCIFERHAGDVMWRHTEAEMPGH-VREVRPEVSLVVRMVATVGNYDYIIDWEFKPSGSIKMG 415 (662)
Q Consensus 337 lD~~~~~~~g~p~~~~naiCi~E~d~~g~l~kH~~~~~~~~-~~~~r~~~~LVvr~i~TVgNYdYi~~w~F~~DGtIe~~ 415 (662)
||+++++++|+|++++|||||||+| +||||||+|+++++. ++.+|++++||||+|+|||||||||+|+|||||+||+|
T Consensus 321 ~D~~~~~~~G~p~~~~naiCihE~d-~gilwkH~~~r~~~~~~~~v~r~r~LVvr~i~TV~NYdYif~w~F~qdG~Ie~e 399 (642)
T 1ksi_A 321 IDTYVHSANGTPILLKNAICVFEQY-GNIMWRHTENGIPNESIEESRTEVNLIVRTIVTVGNADNVIDWEFKASGSIKPS 399 (642)
T ss_dssp EEEEEECTTCCEEEEEEEEEEEEEE-EEEEEEEEECCSTTCCEEEEEEEEEEEEEEEEEETTEEEEEEEEECTTSCEEEE
T ss_pred eeeEEecCCCCEEEcCCEEEEEecc-CCcceeeccccCCCceeeeeeeccEEEEEEEEeecccceEEEEEEecCceEEEE
Confidence 9999999999999999999999999 999999999998754 45677788999999999999999999999999999999
Q ss_pred EEEeEEEeeecccccccCccccCCccceecCCccccccceEEEeeeecCCCCCCCceEEEEEEEecCCCCCCCcceeEEE
Q 006085 416 VGLSGVLEVKPVEYTYVDQIKEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTNVNTPRKSYWTV 495 (662)
Q Consensus 416 v~aTGil~t~~~~~~~~~~~~~~~yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~~~np~~~~~~~ 495 (662)
|+|||||+|+++.+...++.++.+|||+|+|+++|++|||+|||||||||||++|||+++|+++++.+.++||++++|++
T Consensus 400 v~aTGil~t~~~~~~~~~~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~~~~~~~~~~~~np~~~~~~~ 479 (642)
T 1ksi_A 400 IALSGILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHFYIYYLDFDIDGTHNSFEKTSLKTVRIKDGSSKRKSYWTT 479 (642)
T ss_dssp EEEEECCCEEECSCCSGGGCCSCCSEEEEETTEEEECEEEEEEEEEEECTTSSCBEEEEEEEEEEECCSSCSSCSEEEEE
T ss_pred EEEEEEEEecccccccccccccCCCcceecCCcccccceEEEEEeeccCCCCCCCeEEEEeeEecCCCCCCCCCcceEEE
Confidence 99999999988766443322357899999999999999999999999999999999999999999987679999999999
Q ss_pred EEEEeechhhhhhcCCCCCcEEEEeCCCCCCCCCCceeEEEccCCcccCCCCCCChhccccccceeeeEEeecCCCCCCC
Q 006085 496 EKETAKTEFEARLNLDTKPMEFALVNPSKKTKIGHPVGYRLLPGSIIGPMLMEDDYPQIRAGFTNYNVWVTPYKKSEKYS 575 (662)
Q Consensus 496 ~~~~l~tE~ea~~~~~~~~r~~~ivN~~~~N~~G~p~gYrl~p~~~~~~~~~~~s~~~~ra~fa~~~lwVT~y~~~E~~a 575 (662)
++++++||++|+++++..+|+|+|+|++++|++|+|+||||+|+++++++++++|+..+||+||+|+||||+|+++|+||
T Consensus 480 ~~t~~~tE~ea~~~~~~~~r~~~i~N~~~~N~~G~p~gYkl~p~~~~~~l~~~~s~~~~Ra~fa~~~lwVT~y~d~E~~a 559 (642)
T 1ksi_A 480 ETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLIPAIPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWA 559 (642)
T ss_dssp EEEECCBGGGGCBCTTSSCEEEEEEEEEEECTTSCEEEEEEECCSCCCCCSCTTSHHHHHTGGGGCSEEEEECCTTCCCT
T ss_pred EEEEccchhhhhhccCCCceEEEEEcCCCcCCCCCeeeEEEccCCcccccCCCcchhhhhhhccccceEEecCCCCccCC
Confidence 99999999999999998999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCcCCCCCCCChhccccCCCceeeCCcEEEEEeceecCCCCCCCCcccceeeeeEEEecCCCCCCCCCCCCCCCCCCC
Q 006085 576 GGNYVDQSHGDDTLLQWTDGNREIENTDIVLWYTMGIHHAPCQEDFPVMPTVSCGFELRPTNFFEYNPVLKVIPPKHVQR 655 (662)
Q Consensus 576 sg~y~~q~~~~~~l~~~~~~~e~i~~~DiV~W~t~G~~HvPr~ED~Pvmp~~~~~f~L~P~nFFd~nP~ldvp~~~~~~~ 655 (662)
+|+|+||+++++|+.+|+++||+|+|+|||||||||+||+||+|||||||++++||+|||+||||+||+||+|++.+++.
T Consensus 560 ~g~y~~qs~~~~gl~~~~~~~~~i~~~DiV~W~t~G~~H~Pr~ED~PvMp~~~~~f~L~P~nFF~~nP~ldvp~~~~~~~ 639 (642)
T 1ksi_A 560 GGLYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIHHVPAQEDFPIMPLLSTSFELRPTNFFERNPVLKTLSPRDVAW 639 (642)
T ss_dssp TCSCCBTCCSSSSHHHHGGGCCBCSSBCEEEEEEEEEEECCCGGGSSSCCCEEEECEEEESSCSSSCTTTTCCCCCBCCC
T ss_pred CCCCccCCCCCCChhhhhhCCCccccCCcEEEEecccccCCChhhCCCCccceEEEEEEeCCCCCCCCCccCCCCccCCC
Confidence 99999999998999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC
Q 006085 656 PNY 658 (662)
Q Consensus 656 ~~~ 658 (662)
|+|
T Consensus 640 ~~~ 642 (642)
T 1ksi_A 640 PGC 642 (642)
T ss_dssp CCC
T ss_pred CCC
Confidence 988
No 2
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A*
Probab=100.00 E-value=1.1e-188 Score=1587.24 Aligned_cols=625 Identities=27% Similarity=0.454 Sum_probs=584.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCCCCeEEEEEEccCCChHHhhhhhccCCCCCCcEEEEEEEe--CCeEEEEEEECC
Q 006085 19 SKRHPLDSLRPSEFTRVQTIVKTSYPSNNLSFHYVGMDEPDKAVVYSWLSNSKTKFPRRAIVIARH--NHQTHEIIVDLS 96 (662)
Q Consensus 19 ~~~HPldpLt~~Ei~~a~~il~~~~~~~~~~f~~i~L~EP~K~~vl~~l~~~~~~p~R~A~vv~~~--~~~~~e~vV~L~ 96 (662)
..+|||||||++||++|++||+++.++.+++|++|+|+||+|++|++|+++.+++|+|+|+|+++. +++++|++|||+
T Consensus 20 ~~~HPLDpLs~~Ei~~a~~iv~~~~~~~~~~F~~i~L~EP~K~~v~~~~~~~~~~p~R~a~v~~~~~~~~~~~e~vVdl~ 99 (692)
T 3sxx_A 20 RPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLA 99 (692)
T ss_dssp CCSSTTSCCCHHHHHHHHHHHHHHTTTSCEEEEEEEEECCCHHHHHHHHHSCCCCCCCEEEEEEEETTCSSEEEEEEETT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCCCCCcEEEEEECCCCCHHHHHHHHhcCCCCCCeEEEEEEEECCCCCEEEEEEECC
Confidence 346999999999999999999998777889999999999999999999988556789999999998 788999999999
Q ss_pred CCeEEEEEeecCCCcCCCCHHHHHHHHHHHhcChHHHHHHHhcCC---CCCceEEccccccccCC-CCCeeEEEEEEEEe
Q 006085 97 KRSIVSDKVYTGHGFPLLTLEEQHAGAALVLAYEPFKASVKKRGL---NISDVVCSASTVGWYGE-KKSKRVLKFPCFYT 172 (662)
Q Consensus 97 ~~~v~~~~~~~~~~~p~~~~~e~~~~e~~~~~~p~~~~~~~~~gi---~~~~v~~d~w~~G~~~~-~~~rRl~~~~~~~~ 172 (662)
+++|++|+.+++ +||+++.||+.+||++|++||+|+++|++||| +++.|+||||++|+++. +.+|||+|++||+|
T Consensus 100 ~~~v~~~~~~~~-~~p~~~~ee~~~~e~~~~~~p~~~~a~~~rgl~~~~~~~V~~dpw~~G~~~~~~~~~Rl~~~~~y~r 178 (692)
T 3sxx_A 100 SLSVIETRALET-VQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYR 178 (692)
T ss_dssp TTEEEEEEEETT-CCCCCCHHHHHTHHHHHHHCHHHHHHHHHTTCCGGGGGGEEEEEEECCCCTTTTTSSCEEEEEEEEC
T ss_pred CCeEEEEEECCC-CcCCcCHHHHHHHHHHHHhCHHHHHHHHHcCCCccccceEEEccccccccCCCCCCceEEEEEEEEe
Confidence 999999999985 68999999999999999999999999999999 56779999999999876 44799999999999
Q ss_pred eCCCCCcccCcCCCeEEEEecCCcEEEEEeCCcc-ccCCCCCCCCCCcCCCC--CCCCC-CCCCceeec-cCCeEEEece
Q 006085 173 DQGTINMFLRPIEGITIVVDIEEMKVTEYNDREV-APIPKPEPTEYRLSKLK--PPFGP-RLNSVATSS-TRPGFKINGN 247 (662)
Q Consensus 173 ~~~~~n~Ya~Pl~g~~~~vD~~~~~vv~i~d~~~-~~~p~~~~~~y~~~~~~--~~~r~-~~kP~~i~q-eG~sf~v~g~ 247 (662)
..+++|+|||||| |+++||++++||++|++... .|+|+.+..+|+++.+. +++|+ ++||++|+| ||+||+|+||
T Consensus 179 ~~~~~N~Ya~Pl~-~~~vvD~~~~~vi~id~~~~~~p~~~~~~~~Y~p~~~~~~~~~r~~d~kP~~i~QPeG~sF~v~g~ 257 (692)
T 3sxx_A 179 SDEDDSQYSHPLD-FCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGN 257 (692)
T ss_dssp SSTTSCGGGCBCS-CEEEEETTTTEEEEEECCSSCCCCCCSCCCCCSHHHHHHHHSSCCCCCCCCEEECTTCCSCEEETT
T ss_pred cCCCCCcccccce-eEEEEECCCCEEEEEecCCCCCCCCCCCCCCCChHHccccCCCCCCCCCCceecCCCCCcEEEcCC
Confidence 6668999999999 99999999999999998765 56777777899987654 46799 999999999 9999999999
Q ss_pred EEEeeceEEEEEecCCcceEEEeeEEecCCCCeEeEEEEeeeceeEEeecCCCCCcccceeeeecCCCCcccCCcCCCCC
Q 006085 248 TVKWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERL 327 (662)
Q Consensus 248 ~V~W~~W~f~vgf~~reGl~L~dv~~~d~~~~~~r~I~yrlsl~Em~vpYgdp~~~~~~k~~~D~geyG~G~~a~~L~~G 327 (662)
+|+||||+||||||+||||+||||+|+| .|+.||||||+|||||+||||||+++|++|+|||+||||+|.+||+|++|
T Consensus 258 ~V~W~~W~F~vgf~~reGlvL~dV~y~~--~g~~R~V~YrlSl~Em~VPYgdp~~p~~~k~afD~GeyG~G~~an~L~lG 335 (692)
T 3sxx_A 258 VMEWSNFKFHIGFNYREGIVLSDVSYND--HGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLG 335 (692)
T ss_dssp EEEETTEEEEEEEETTTEEEEEEEEEEE--TTEEEEEEEEEEEEEEEEEBCCCSTTGGGCEECHHHHTCTTTTBCCCTTT
T ss_pred eEEecCcEEEEecCCCCceEEEEEEEcC--CCcceeeeeeeehheeEEecCCCCchhhhheeeeccccCCCccccccccC
Confidence 9999999999999999999999999999 78999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccEEeeeEeecCCCceeEeCceEEEEEeeCCCceecccccCCC--CceeecccceEEEEEEEEEecccceEEEEE
Q 006085 328 NDCPANAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWRHTEAEMP--GHVREVRPEVSLVVRMVATVGNYDYIIDWE 405 (662)
Q Consensus 328 ~DCpg~~~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~kH~~~~~~--~~~~~~r~~~~LVvr~i~TVgNYdYi~~w~ 405 (662)
|||||+|+|||+++.+++|+|++++|||||||+| .|+||||++++++ .. .++++++||||+|+|||||||||+|+
T Consensus 336 cDCpg~i~YlD~~~~~~~G~p~~~~NaICihE~d-~Gil~kHt~~r~~~~~~--~v~r~r~LVvr~i~TVgNYDYif~w~ 412 (692)
T 3sxx_A 336 CDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEED-DGLLFKHSDFRDNFATS--LVTRATKLVVSQIFTAANYEYCLYWV 412 (692)
T ss_dssp TTSCSSCEEEEEEEECTTSCEEEEEEEEEEEEEE-EEEEEEEECGGGTTCSE--EEEEEEEEEEEEEEEETTEEEEEEEE
T ss_pred CCCCCCcEEeeeEEecCCCCEEEecceEEEeecc-CCceEEeeeccCCCcee--eEEeccEEEEEEeeeccceeEEEEEE
Confidence 9999999999999999999999999999999999 5699999999876 44 23445599999999999999999999
Q ss_pred EecCccEEEEEEEeEEEeeecccccccCccccCCccceecCCccccccceEEEeeeecCCCCCCCceEEEEEEEecCCC-
Q 006085 406 FKPSGSIKMGVGLSGVLEVKPVEYTYVDQIKEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTN- 484 (662)
Q Consensus 406 F~~DGtIe~~v~aTGil~t~~~~~~~~~~~~~~~yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~- 484 (662)
|||||+||+||+|||||+|++.. .++ ++.+|||+|+|+++|++|||+|||||||||||.+|||+++|+++++.+.
T Consensus 413 F~qdG~Ie~ev~aTGil~t~~~~---~~~-~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~~ 488 (692)
T 3sxx_A 413 FMQDGAIRLDIRLTGILNTYILG---DDE-EAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLG 488 (692)
T ss_dssp ECTTSCEEEEEEEEECCCCEECC---TTC-CCTTTEEEEETTEEEECEEEEEEEEEEECTTSSCBEEEEEEEEECSSCTT
T ss_pred EecCCeEEEEEEEEEEEEeeeeC---CCc-ccCCCcceecCCccccceeEEEEEEeccccCCCCceEEEEEeEEccCCCC
Confidence 99999999999999999987532 221 1478999999999999999999999999999999999999999998863
Q ss_pred -CCCCcceeEEEEEEEeechhhhhhcCCC-CCcEEEEeCCCCCCCC-CCceeEEEccCCcccCCCCCCChhcccccccee
Q 006085 485 -VNTPRKSYWTVEKETAKTEFEARLNLDT-KPMEFALVNPSKKTKI-GHPVGYRLLPGSIIGPMLMEDDYPQIRAGFTNY 561 (662)
Q Consensus 485 -~~np~~~~~~~~~~~l~tE~ea~~~~~~-~~r~~~ivN~~~~N~~-G~p~gYrl~p~~~~~~~~~~~s~~~~ra~fa~~ 561 (662)
+.||++++|++++++++||++|++++++ ++|+|+|+|++++|++ |+|+||||+|+++++++++++|+..+||+||+|
T Consensus 489 ~~~np~g~~~~~~~t~~~tE~ea~~~~~~~~~R~~~i~N~~~~N~~sG~pvgYkL~p~~~~~ll~~~~s~~~~ra~fa~~ 568 (692)
T 3sxx_A 489 SPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASH 568 (692)
T ss_dssp BTTBTTSCCEEEEEEECCBHHHHCBCCCGGGTCEEEEECTTCCCTTTCSCCEEEEECCCCCCCCSCTTSHHHHHCGGGGS
T ss_pred CCCCCCcceeEEEEEEccchhhhhhccCCCCCcEEEEeCCCCcCCCCCccceEEEecCCCCcccCCCCchhhhhchhccc
Confidence 3799999999999999999999999999 9999999999999999 999999999999999999999999999999999
Q ss_pred eeEEeecCCCCCCCCCcCcCCCCCC--CChhccc-cCCCceeeCCcEEEEEeceecCCCCCCCCcccceeeeeEEEecCC
Q 006085 562 NVWVTPYKKSEKYSGGNYVDQSHGD--DTLLQWT-DGNREIENTDIVLWYTMGIHHAPCQEDFPVMPTVSCGFELRPTNF 638 (662)
Q Consensus 562 ~lwVT~y~~~E~~asg~y~~q~~~~--~~l~~~~-~~~e~i~~~DiV~W~t~G~~HvPr~ED~Pvmp~~~~~f~L~P~nF 638 (662)
+||||||+|+|+||||+|+||+.++ ++|++|+ ++||+|+|||||||||||+||+||+|||||||++++||+|||+||
T Consensus 569 ~lwVT~y~d~E~~aag~y~nQs~g~p~~gl~~w~~~~~e~I~n~DiV~W~t~G~~HiPr~ED~PvMP~~~~gf~LrP~nF 648 (692)
T 3sxx_A 569 SVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHF 648 (692)
T ss_dssp SEEEEECCTTCCCTTCSSCTTCCSCSSCHHHHHHTTSCSBCSSBCEEEEEEEEEEECCCGGGSSSCCCEEEEEEEEEESS
T ss_pred ceEEecCCCCccCCCCCCccCCCCCCCCChHHHhhcCCceeecCceEEEEecCcccCCchhcCCCCcceEEEEEEECCCc
Confidence 9999999999999999999999987 6899999 899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCC
Q 006085 639 FEYNPVLKVIPPKHVQ 654 (662)
Q Consensus 639 Fd~nP~ldvp~~~~~~ 654 (662)
||+||+||||++.+..
T Consensus 649 Fd~NPaldvp~~~~~~ 664 (692)
T 3sxx_A 649 FTENPGLDIQPSYAMT 664 (692)
T ss_dssp SSSCTTTTSCCSEEEC
T ss_pred CCCCCcccCCCccccc
Confidence 9999999999985543
No 3
>3loy_A Copper amine oxidase; TPQ, oxidoreductase; HET: TPQ TLA; 2.00A {Pichia angusta}
Probab=100.00 E-value=3e-186 Score=1559.16 Aligned_cols=611 Identities=25% Similarity=0.408 Sum_probs=572.2
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCC-CCeEEEEEEccCCChHHhhhhhccC-----CCCCCcEEEEEEEeCCeEEEEEEE
Q 006085 21 RHPLDSLRPSEFTRVQTIVKTSYPS-NNLSFHYVGMDEPDKAVVYSWLSNS-----KTKFPRRAIVIARHNHQTHEIIVD 94 (662)
Q Consensus 21 ~HPldpLt~~Ei~~a~~il~~~~~~-~~~~f~~i~L~EP~K~~vl~~l~~~-----~~~p~R~A~vv~~~~~~~~e~vV~ 94 (662)
.|||||||++||++|++||+++.++ .+++|++|+|+||+|++|++||+++ .++|+|+|+|+++.+++++|++||
T Consensus 1 ~HPLdpLs~~Ei~~a~~iv~~~~~~~~~~~F~~i~L~EP~K~~v~~~l~~~~~g~~~~~p~R~a~v~~~~~~~~~e~vVd 80 (633)
T 3loy_A 1 VHPYDPISDAELQLTSQLIKDATKGPERPHFIQIDRLDPPKKDMIRYLEAERTGKPLPHISRMTYVYYYIGLDFYKALVN 80 (633)
T ss_dssp CCTTCCCCHHHHHHHHHHHHHHCCSSSCEEEEEEEECCCCHHHHHHHHHHHHHTCCCCCCCCEEEEEEEETTEEEEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHhhccCCCCcEEEEEECCCCCHHHHHHHHhhhhcCCCCCCCCcEEEEEEEeCCCEEEEEEE
Confidence 5999999999999999999998766 7899999999999999999998642 246789999988888899999999
Q ss_pred CCCCeEEEEEeecCCCcCCCCHHHHHHHHHHHhcChHHHHHHHhcCC-CCCceEEccccccccCCCCCeeEEEEEEEEee
Q 006085 95 LSKRSIVSDKVYTGHGFPLLTLEEQHAGAALVLAYEPFKASVKKRGL-NISDVVCSASTVGWYGEKKSKRVLKFPCFYTD 173 (662)
Q Consensus 95 L~~~~v~~~~~~~~~~~p~~~~~e~~~~e~~~~~~p~~~~~~~~~gi-~~~~v~~d~w~~G~~~~~~~rRl~~~~~~~~~ 173 (662)
|++++|++++.+++++||+++.||+.+||++|++||+|+++|++||| +++.|+||||++|+++ +++|||+||+||+|.
T Consensus 81 l~~~~v~~~~~~~~~~~p~~~~~e~~~~e~~~~~~p~~~~a~~~~gl~~~~~V~~dpw~~G~d~-~~~~Rl~q~~~y~r~ 159 (633)
T 3loy_A 81 VSYGHIITNQKQPKGVIGPLIAEDIQEIEELATTHPIVKAEIEKLKLPPHVRVVCDPWMNGTDS-KEDRMLIQCYMYLAS 159 (633)
T ss_dssp TTTTEEEEEEECCTTCCCCCCHHHHHHHHHHHTTSHHHHHHHHTTCCCTTEEEEEEEEECCCSS-CCCSCEEEEEEEEEE
T ss_pred CCCCeEEEEEecCCCccCCCCHHHHHHHHHHHHhCHHHHHHHHHcCCCCCceEEEeccccccCC-CCCcEEEEEEEEEec
Confidence 99999999999998789999999999999999999999999999999 6789999999999866 578999999999996
Q ss_pred --CCCCCcccCcCCCeEEEEecCCcEEEEEeCCcc---------ccCCCCCCCCCCcCCCCCCCCCCCCCceeec-cCCe
Q 006085 174 --QGTINMFLRPIEGITIVVDIEEMKVTEYNDREV---------APIPKPEPTEYRLSKLKPPFGPRLNSVATSS-TRPG 241 (662)
Q Consensus 174 --~~~~n~Ya~Pl~g~~~~vD~~~~~vv~i~d~~~---------~~~p~~~~~~y~~~~~~~~~r~~~kP~~i~q-eG~s 241 (662)
++++|+|||||| |.++||++++||++|++... .|+++.+..+|+++.+++ +|+++||++|+| ||+|
T Consensus 160 ~~~~~~N~Ya~Pl~-~~~vvD~~~~~vi~id~~~~g~~~~~~~~~p~~~~~~~~Y~p~~~~~-~r~d~kp~~i~QPeG~s 237 (633)
T 3loy_A 160 AAHPESNHYSLPLK-FSPVFECLTKKFVRMDYLPGGADETVTETQAWDEFPFVEYHPDLNGE-TIVPLKPLIVQQPEGPS 237 (633)
T ss_dssp TTCTTCCGGGSBCS-EEEEEETTTCCEEEEEECCCSSSSCCCSCCCCCCCCCCCCSTTTSCC-CCCCCCCCEEECTTCCS
T ss_pred CCCCCccccccccc-eEEEEECCCCEEEEEEecCcCcccccccccCCCCCCCCCcChhHccc-ccCCCCCcceeCCCCCC
Confidence 578999999998 88999999999999986411 134455568999887644 899999999999 9999
Q ss_pred EEEeceEEEeeceEEEEEecCCcceEEEeeEEecCCCCeEeEEEEeeeceeEEeecCCCCCcccceeeeecCCCCcccCC
Q 006085 242 FKINGNTVKWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTA 321 (662)
Q Consensus 242 f~v~g~~V~W~~W~f~vgf~~reGl~L~dv~~~d~~~~~~r~I~yrlsl~Em~vpYgdp~~~~~~k~~~D~geyG~G~~a 321 (662)
|+|+||+|+||||+||||||+||||+||||+|+| ||||||+|||||+||||||+++|++|+|||+||||+|.+|
T Consensus 238 F~v~g~~V~W~~W~f~vgf~~reGlvL~dv~y~g------r~V~YrlSl~Em~VPYgdp~~p~~~k~afD~GeyG~G~~a 311 (633)
T 3loy_A 238 FNVDGHKISWQGWEFFVIPTVREGFAIYDIHFKG------RSVVYRLSLSEMTVPYGDPRAPFHRKQAFDLGDCGFGATG 311 (633)
T ss_dssp EEEETTEEEETTEEEEEEEETTTEEEEEEEEETT------EEEEEEEEEEEEEEEBCCCSTTGGGCEEEHHHHTCTTTTB
T ss_pred EEEcCCccccCCcEEEEecCCCcCcEEEeeEECC------EEEEEEEEeeeEEEeCCCCCChhhhheeecccccCccccc
Confidence 9999999999999999999999999999999998 9999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCccEEeeeEeecCCCceeEeCceEEEEEeeCCCceecccccCCCCc-eeecccceEEEEEEEEEecccce
Q 006085 322 VPLERLNDCPANAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWRHTEAEMPGH-VREVRPEVSLVVRMVATVGNYDY 400 (662)
Q Consensus 322 ~~L~~G~DCpg~~~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~kH~~~~~~~~-~~~~r~~~~LVvr~i~TVgNYdY 400 (662)
|+|++||||||+|+|||+++.+++|+|++++|||||||+| .|++|||++++++.+ ++|+| +||||+|+|||||||
T Consensus 312 ~~L~~GcDCpg~i~YlD~~~~~~~G~p~~~~naICihE~d-~Gi~~kHt~~r~~~~~v~r~r---~LVvr~i~TVgNYdY 387 (633)
T 3loy_A 312 NSLALGCDCLGVIKYMDCRRVNTNGDSVLIPNTVCLHEQD-GGLLYKHTNYRTNVPVIARRR---EFVVQTIATVANAEY 387 (633)
T ss_dssp CCSTTTTCSCSSEEEEEEEEECTTSCEEEEEEEEEEEEEE-EEEEEEEECTTTCCEEEEEEE---EEEEEEEEEETTEEE
T ss_pred cCCccCCCCCCCcEEeeeEEecCCCCEEEecceEEEEecc-CCceeeeccccCCceeEEEee---EEEEEEEeeccceeE
Confidence 9999999999999999999999999999999999999999 779999999998776 66555 999999999999999
Q ss_pred EEEEEEecCccEEEEEEEeEEEeeecccccccCccccCCccceecCCccccccceEEEeeeecCCCCCCCceEEEEEEEe
Q 006085 401 IIDWEFKPSGSIKMGVGLSGVLEVKPVEYTYVDQIKEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTR 480 (662)
Q Consensus 401 i~~w~F~~DGtIe~~v~aTGil~t~~~~~~~~~~~~~~~yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~ 480 (662)
||+|+|||||+||+||+|||||+|++.. ++++.+|||+|+|+++|++|||+|||||||||||.+|||+++|++++
T Consensus 388 if~w~F~~dG~Ie~ev~aTGil~t~~~~-----~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~ 462 (633)
T 3loy_A 388 MLNIIFDQAGEIRIHVRATGILSTMPLD-----KDVTVPWGTNVGPRVMAAYHQHMLSFRIDPAVDGYENTVVFDDVIRM 462 (633)
T ss_dssp EEEEEEETTSCEEEEEEEEECCCCEECC-----TTCCCTTEEEEETTEEEECEEEEEEEEEEECTTSSCBEEEEEEEEEC
T ss_pred EEEEEEecCCeEEEEEEEEEEEeeeecC-----CcccCCCcceecCCccccceeEEEEEEecccccCCCCEEEEEeeeec
Confidence 9999999999999999999999986531 12357899999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcceeEEEEEEEeechhhhhhcCCC-CCcEEEEeCCCCCCCC-CCceeEEEccCCcccCCCCCCChhcccccc
Q 006085 481 RNTNVNTPRKSYWTVEKETAKTEFEARLNLDT-KPMEFALVNPSKKTKI-GHPVGYRLLPGSIIGPMLMEDDYPQIRAGF 558 (662)
Q Consensus 481 ~~~~~~np~~~~~~~~~~~l~tE~ea~~~~~~-~~r~~~ivN~~~~N~~-G~p~gYrl~p~~~~~~~~~~~s~~~~ra~f 558 (662)
+.....||++++|+++++++++| |++++++ ++|+|+|+|++++|++ |+|+||||+|++++++++.++|+..+||+|
T Consensus 463 ~~~~~~nP~g~~~~~~~t~l~~e--a~~~~~~~~~r~~~i~N~~~~N~~~G~p~gYkl~p~~~~~ll~~~~s~~~~Ra~f 540 (633)
T 3loy_A 463 EKNTKLNPYNVGFVTERTVVEKP--GYVEQSPFTNRSYKIINENKINPISKKPVAYKIMMPARQMLLADEDSYNNKRAQF 540 (633)
T ss_dssp CSSSSSSTTSCCEEEEEEECCSS--EEECCCGGGTCEEEEEEEEEECTTTCSEEEEEEECCCCCCCCSCSSSHHHHHCGG
T ss_pred CCCCCCCCCCcceEEEEEEeccc--cccccCCCCccEEEEECCCCcCCCCCccceEEEccCCCCcccCCCCchhhhccch
Confidence 87655899999999999999876 6899999 9999999999999996 999999999999999999999999999999
Q ss_pred ceeeeEEeecCCCCCCCCCcCcCCCCCCCChhccccCCCceeeCCcEEEEEeceecCCCCCCCCcccceeeeeEEEecCC
Q 006085 559 TNYNVWVTPYKKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENTDIVLWYTMGIHHAPCQEDFPVMPTVSCGFELRPTNF 638 (662)
Q Consensus 559 a~~~lwVT~y~~~E~~asg~y~~q~~~~~~l~~~~~~~e~i~~~DiV~W~t~G~~HvPr~ED~Pvmp~~~~~f~L~P~nF 638 (662)
|+|+||||||+|+|+||||+|+||+.++++|++|+++||+|+|||||+|||||+||+||+|||||||++++||+|||+||
T Consensus 541 a~~~lwVT~y~d~E~~aag~y~nQs~~~~gl~~w~~~~e~i~n~DiV~W~t~G~~HiPr~ED~PvMP~~~~~f~LrP~nF 620 (633)
T 3loy_A 541 ATQQVWVTKYRDNELYAAGEFTNQSQTDTGLGVWARRDENVRNDNPVVWATLGFTHIPRVEDFPVMPVEAHEIALVPFGF 620 (633)
T ss_dssp GGSSEEEEECCTTCCCTTCSCCTTCSSCCSHHHHTTCCCCCTTBCEEEEEEEEEEECCCGGGCSSEEEEEEEEEEEEESS
T ss_pred hhcceEEecCCCCccccCCCCccCCCCCCChHHHhcCCCccccCceEEEEecCcccCCCcccCCCCccceeeEEEEcCCc
Confidence 99999999999999999999999999989999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCC
Q 006085 639 FEYNPVLKVIPPK 651 (662)
Q Consensus 639 Fd~nP~ldvp~~~ 651 (662)
||+||+|||||++
T Consensus 621 Fd~nP~ldvp~s~ 633 (633)
T 3loy_A 621 FDKNPALSVPQST 633 (633)
T ss_dssp SSSCGGGGSCCCC
T ss_pred CCCCccccCCCCC
Confidence 9999999999974
No 4
>1w6g_A Phenylethylamine oxidase; copper containing, metal-binding, oxidoreductase, TPQ, quinone, holoenzyme; HET: TPQ GOL; 1.55A {Arthrobacter globiformis} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 PDB: 1w6c_A* 1rjo_A* 2bt3_A* 2cfd_A* 2cfg_A* 2cfk_A* 2cfl_A* 2cfw_A* 2cg0_A* 2cg1_A* 1w4n_A* 1sih_A* 1sii_A* 1w5z_A* 3kii_A* 3kn4_A* 1iqy_A* 1avl_A* 1av4_A* 1iqx_A* ...
Probab=100.00 E-value=4.8e-183 Score=1539.80 Aligned_cols=612 Identities=26% Similarity=0.454 Sum_probs=571.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCC-CCCeEEEEEEccCCChHHhhhhhccCCCCCCcEEEEEEEe--CCeEEEEEEECC
Q 006085 20 KRHPLDSLRPSEFTRVQTIVKTSYP-SNNLSFHYVGMDEPDKAVVYSWLSNSKTKFPRRAIVIARH--NHQTHEIIVDLS 96 (662)
Q Consensus 20 ~~HPldpLt~~Ei~~a~~il~~~~~-~~~~~f~~i~L~EP~K~~vl~~l~~~~~~p~R~A~vv~~~--~~~~~e~vV~L~ 96 (662)
.+|||||||++||++|++||+++.+ ..+++|++|+|+||+|++ + +++|+|+|+|++++ +++++|++|+|+
T Consensus 6 ~~HPldpLs~~Ei~~a~~iv~~~~~~~~~~~F~~i~L~eP~K~~------g-~~~P~R~A~vv~~~~~~~~~~E~vV~L~ 78 (646)
T 1w6g_A 6 TASPFRLASAGEISEVQGILRTAGLLGPEKRIAYLGVLDPARGA------G-SEAEDRRFRVFIHDVSGARPQEVTVSVT 78 (646)
T ss_dssp -CCTTCCCCHHHHHHHHHHHHHTTCCCTTEEEEEEEECCCCSCC------S-SSCCCCEEEEEEEETTSCCCEEEEEETT
T ss_pred CCCCCCCCCHHHHHHHHHHHHhcccCCCCcEEEEEEccCCchhh------C-CCCCCeEEEEEEEECCCCcEEEEEEECC
Confidence 3799999999999999999999876 678999999999999998 2 34689999999998 678999999999
Q ss_pred CCeEEE---EEeecCCCcCCCCHHHHHHHHHHHhcChHHHHHHHhcCC-CCCceEEccccccccCC--CCCeeEEEEEEE
Q 006085 97 KRSIVS---DKVYTGHGFPLLTLEEQHAGAALVLAYEPFKASVKKRGL-NISDVVCSASTVGWYGE--KKSKRVLKFPCF 170 (662)
Q Consensus 97 ~~~v~~---~~~~~~~~~p~~~~~e~~~~e~~~~~~p~~~~~~~~~gi-~~~~v~~d~w~~G~~~~--~~~rRl~~~~~~ 170 (662)
+++|++ ++.++ ++||+++.+|+.+++++|+++|+|+++|++||| +++.|+| ||++||++. +.+||++|++||
T Consensus 79 ~~~v~~~~~~~~~~-~~~~~~~~~E~~~~e~~~~~~p~~~~~i~~~gl~~~~~v~~-pw~~g~~~~~~~~~~Rl~~~~~~ 156 (646)
T 1w6g_A 79 NGTVISAVELDTAA-TGELPVLEEEFEVVEQLLATDERWLKALAARNLDVSKVRVA-PLSAGVFEYAEERGRRILRGLAF 156 (646)
T ss_dssp TTEEEEEEECCHHH-HCBCCCCHHHHHHHHHHHTTCHHHHHHHHHTTCCGGGEEEE-EEECCCCSCGGGTTSCEEEEEEE
T ss_pred CCeEEecccceeCC-CccCCCCHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCeeEE-eecccccCCccCCCcEEEEEEEE
Confidence 999998 77777 569999999999999999999999999999999 4677999 999997765 347999999999
Q ss_pred EeeCCCCCcccCcCCCeEEEEecCCcEEEEEeCCccccCCCCCCCCCCcCCCCCCCCCCCCCceeec-cCCeEEEe-ceE
Q 006085 171 YTDQGTINMFLRPIEGITIVVDIEEMKVTEYNDREVAPIPKPEPTEYRLSKLKPPFGPRLNSVATSS-TRPGFKIN-GNT 248 (662)
Q Consensus 171 ~~~~~~~n~Ya~Pl~g~~~~vD~~~~~vv~i~d~~~~~~p~~~~~~y~~~~~~~~~r~~~kP~~i~q-eG~sf~v~-g~~ 248 (662)
+|..+++|+|+|||+||+++||+.++||++|++.+..+.|. +..+|+++.+.+++|+++||++|+| ||+||+|+ ||+
T Consensus 157 ~r~~~~~n~Ya~Pl~gl~~vvD~~~~~Vi~v~~~~~~~~p~-~~~~y~~~~~~~~~r~~lkP~~i~QPeGpsF~V~~G~~ 235 (646)
T 1w6g_A 157 VQDFPEDSAWAHPVDGLVAYVDVVSKEVTRVIDTGVFPVPA-EHGNYTDPELTGPLRTTQKPISITQPEGPSFTVTGGNH 235 (646)
T ss_dssp ECSSTTCCGGGSBCTTEEEEEETTTTEEEEEEECCCCCCCC-SCCCTTCHHHHCSCCCCCCCCCCCCTTCCSCEEETTTE
T ss_pred EecCCCCCccccccCceEEEEECCCCEEEEEEeCCccCCCC-CCCccchhhcCCCcCCCCCCceecCCCCCceEEeCCCE
Confidence 99666889999999999999999999999999887656664 4569987665456799999999999 99999999 999
Q ss_pred EEeeceEEEEEecCCcceEEEeeEEecCCCCeEeEEEEeeeceeEEeecCCCCCcccceeeeecCCCCcccCCcCCCCCC
Q 006085 249 VKWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLN 328 (662)
Q Consensus 249 V~W~~W~f~vgf~~reGl~L~dv~~~d~~~~~~r~I~yrlsl~Em~vpYgdp~~~~~~k~~~D~geyG~G~~a~~L~~G~ 328 (662)
|+||||+||||||+||||+||||+|+| .|+.||||||+|||||+||||||+++|++|+|||+||||+|.+||+|++||
T Consensus 236 V~W~~W~F~vgfn~ReGlvL~dV~y~~--~g~~R~V~YrlSlsEm~VPYgdp~p~~~~k~afD~GeyG~G~~an~L~lGc 313 (646)
T 1w6g_A 236 IEWEKWSLDVGFDVREGVVLHNIAFRD--GDRLRPIINRASIAEMVVPYGDPSPIRSWQNYFDTGEYLVGQYANSLELGC 313 (646)
T ss_dssp EEETTEEEEEEEETTTEEEEEEEEEEE--TTEEEEEEEEEEEEEEEEEBCCCCTTTTTCEEECCCCCCGGGGBCCCCBTT
T ss_pred EEeCCCEEEEecCCCcceEEEEEEEcC--CCCceEEEEEeeeeEEEEeCCCCCchhhcceeeeccCcCCcccccccccCC
Confidence 999999999999999999999999999 689999999999999999999999999999999999999999999999999
Q ss_pred CCCCccEEeeeEeecCCCceeEeCceEEEEEeeCCCceecccccCCCCceeecccceEEEEEEEEEecccceEEEEEEec
Q 006085 329 DCPANAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWRHTEAEMPGHVREVRPEVSLVVRMVATVGNYDYIIDWEFKP 408 (662)
Q Consensus 329 DCpg~~~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~kH~~~~~~~~~~~~r~~~~LVvr~i~TVgNYdYi~~w~F~~ 408 (662)
||||+|+|||+++++++|+|++++|||||||+| .||||||+|++++.. .+|++++||||+|+|||||||||+|+|||
T Consensus 314 DCpg~i~Y~D~~~~~~~G~p~~~~naICihE~d-~GilwkH~~~r~~~~--~v~r~r~LVvr~i~Tv~NYdYi~~w~F~~ 390 (646)
T 1w6g_A 314 DCLGDITYLSPVISDAFGNPREIRNGICMHEED-WGILAKHSDLWSGIN--YTRRNRRMVISFFTTIGNADYGFYWYLYL 390 (646)
T ss_dssp TBCSSCEEECCEEECTTSCEEECTTCEEEEEEE-EEEEEEEECTTTCCE--EEEEEEEEEEEEEEEETTEEEEEEEEEET
T ss_pred CCCCCCEEEeEEEEcCCCCEEEcCCEEEEeecc-CCcceeeecccCCce--eeecccEEEEEEEeeccccceEEEEEEec
Confidence 999999999999999999999999999999999 559999999998654 34455599999999999999999999999
Q ss_pred CccEEEEEEEeEEEeeecccccccCccccCCccceecCCccccccceEEEeeeecCCCCCCCceEEEEEEEecCCCCCCC
Q 006085 409 SGSIKMGVGLSGVLEVKPVEYTYVDQIKEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTNVNTP 488 (662)
Q Consensus 409 DGtIe~~v~aTGil~t~~~~~~~~~~~~~~~yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~~~np 488 (662)
||+||++|+|||||+|++... ++.+|||+|+|+++|++|||+|+|||||||||.+|||+++|+++++.+ +.||
T Consensus 391 dG~Ie~ev~aTGil~t~~~~~------~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~-~~np 463 (646)
T 1w6g_A 391 DGTIEFEAKATGVVFTSAFPE------GGSDNISQLAPGLGAPFHQHIFSARLDMAIDGFTNRVEEEDVVRQTMG-PGNE 463 (646)
T ss_dssp TSCEEEEEEEEECCCCEECCT------TCCSSEEEEETTEEEECEEEEEEEEEEECTTSSCBEEEEEEEEECCSB-TTBT
T ss_pred CCeEEEEEEEEEEEeeeecCC------ccCCCcceecCCcccccceEEEEEeecccccCCCCEEEEEeeEeccCC-CCCC
Confidence 999999999999999876422 257899999999999999999999999999999999999999999875 5899
Q ss_pred cceeEEEEEEEeechhhhhhcCCC-CCcEEEEeCCCCCCCCCCceeEEEccCCcccCCCCCCChhccccccceeeeEEee
Q 006085 489 RKSYWTVEKETAKTEFEARLNLDT-KPMEFALVNPSKKTKIGHPVGYRLLPGSIIGPMLMEDDYPQIRAGFTNYNVWVTP 567 (662)
Q Consensus 489 ~~~~~~~~~~~l~tE~ea~~~~~~-~~r~~~ivN~~~~N~~G~p~gYrl~p~~~~~~~~~~~s~~~~ra~fa~~~lwVT~ 567 (662)
++++|++++++++||++|+++++. ++|+|+|+|++++|++|+|+||||+|+++++++++++|+..+||+|++|+|||||
T Consensus 464 ~~~~~~~~~t~~~tE~ea~~~~~~~~~r~~~i~N~~~~N~~G~p~gYkl~~~~~~~~l~~~~s~~~~ra~fa~~~lwVT~ 543 (646)
T 1w6g_A 464 RGNAFSRKRTVLTRESEAVREADARTGRTWIISNPESKNRLNEPVGYKLHAHNQPTLLADPGSSIARRAAFATKDLWVTR 543 (646)
T ss_dssp TSCCEEEEEEEECBGGGCEECCCGGGTCEEEEEEEEEECTTSCEEEEEEEECCCCCCCSCTTSHHHHHTGGGGSSEEEEE
T ss_pred CCceeEEEEEEccchhhhhhccCCCCCcEEEEeCCCCcCCCCCeeeEEEccCCcccccCCCCccccccccccccceEEec
Confidence 999999999999999999999999 8999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcCcCCCCCCCChhccccCCCceeeCCcEEEEEeceecCCCCCCCCcccceeeeeEEEecCCCCCCCCCCC
Q 006085 568 YKKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENTDIVLWYTMGIHHAPCQEDFPVMPTVSCGFELRPTNFFEYNPVLKV 647 (662)
Q Consensus 568 y~~~E~~asg~y~~q~~~~~~l~~~~~~~e~i~~~DiV~W~t~G~~HvPr~ED~Pvmp~~~~~f~L~P~nFFd~nP~ldv 647 (662)
|+|+|+||+|+|+||+.++++|++|+++||+|+|+|||||||||+||+||+|||||||++++||+|||+||||+||+||+
T Consensus 544 y~d~E~~aag~y~nQs~~~~~l~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~ED~PvMP~~~~~f~L~P~nFF~~nP~ldv 623 (646)
T 1w6g_A 544 YADDERYPTGDFVNQHSGGAGLPSYIAQDRDIDGQDIVVWHTFGLTHFPRVEDWPIMPVDTVGFKLRPEGFFDRSPVLDV 623 (646)
T ss_dssp CCTTCCCTTCSCCBTCCSSSSHHHHHTTCCBCTTBCEEEEEEEEEEECCCGGGSSSEEEEEEEEEEEESSCSSSCTTTTC
T ss_pred cCCCccccCCCCcccCCCCCChhHHhhCCCCcccCceEEEEeCccccCCCccccCCCCCceEEEEEEecCcCCCCCCccC
Confidence 99999999999999999989999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 006085 648 IPPKHV 653 (662)
Q Consensus 648 p~~~~~ 653 (662)
|++.++
T Consensus 624 p~~~~~ 629 (646)
T 1w6g_A 624 PANPSQ 629 (646)
T ss_dssp CCC---
T ss_pred CCcccc
Confidence 999887
No 5
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A*
Probab=100.00 E-value=9e-178 Score=1521.14 Aligned_cols=616 Identities=32% Similarity=0.598 Sum_probs=566.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCC-CCCeEEEEEEccCCChHHhhhhhccC-CCCCCcEEEEEEEeCCeEEEEEEECCCC
Q 006085 21 RHPLDSLRPSEFTRVQTIVKTSYP-SNNLSFHYVGMDEPDKAVVYSWLSNS-KTKFPRRAIVIARHNHQTHEIIVDLSKR 98 (662)
Q Consensus 21 ~HPldpLt~~Ei~~a~~il~~~~~-~~~~~f~~i~L~EP~K~~vl~~l~~~-~~~p~R~A~vv~~~~~~~~e~vV~L~~~ 98 (662)
+|||||||++||++|++||+++.. .++++|.+|+|+||+|++||+|+..+ +++|+|+|+|+++.+++++|++|+|+.+
T Consensus 93 ~HPLdpLs~~Ei~~a~~il~~~~~~~~~~~F~~i~L~eP~K~~vl~~~~~~~~~~p~R~A~vv~~~~~~~~e~vV~l~~~ 172 (727)
T 1spu_A 93 PHPLNALTADEIKQAVEIVKASADFKPNTRFTEISLLPPDKEAVWAFALENKPVDQPRKADVIMLDGKHIIEAVVDLQNN 172 (727)
T ss_dssp CCTTCCCCHHHHHHHHHHHHTSTTCCTTCEEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEEEETTEEEEEEEETTTT
T ss_pred CCCCCcCCHHHHHHHHHHHHhcccCCCCcEEEEEEecCCCHHHHHhHHhcCCCCCCCeEEEEEEEeCCeEEEEEEeCCCC
Confidence 799999999999999999998753 57899999999999999999996443 3468999999999999999999999999
Q ss_pred eEEEEEeecCCCcCCCCHHHHHHHHHHHhcChHHHHHHHhcCC-CCCceEEccccccccCC-C---CCeeEEEEEEEEee
Q 006085 99 SIVSDKVYTGHGFPLLTLEEQHAGAALVLAYEPFKASVKKRGL-NISDVVCSASTVGWYGE-K---KSKRVLKFPCFYTD 173 (662)
Q Consensus 99 ~v~~~~~~~~~~~p~~~~~e~~~~e~~~~~~p~~~~~~~~~gi-~~~~v~~d~w~~G~~~~-~---~~rRl~~~~~~~~~ 173 (662)
+|++++.++ ++||+++.+|+.++|++|+++|.|+++|+++|| ++..|+||||++|+++. . ++||++|++||+.
T Consensus 173 ~v~~~~~~~-~~~~~~~~~e~~~~e~~~~~~p~~~~~~~~~gl~~~~~v~~dpw~~g~~~~~~~~~~~~R~~~~~~~~~- 250 (727)
T 1spu_A 173 KLLSWQPIK-DAHGMVLLDDFASVQNIINNSEEFAAAVKKRGITDAKKVITTPLTVGYFDGKDGLKQDARLLKVISYLD- 250 (727)
T ss_dssp EEEEEEEET-TCCCCCCHHHHHHHHHHHHHCHHHHHHHHHTTCSCTTSEEEEEECCCCCTTTTCCCSSSCEEEEEEEEC-
T ss_pred ceEEEEeCC-CcCCCCCHHHHHHHHHHHHhCHHHHHHHHHhCCCccceEEEccccccccCCCCCCCCCcEEEEEEEEEE-
Confidence 999998887 469999999999999999999999999999999 79999999999998763 2 4799999999986
Q ss_pred CCCCCcccCcCCCeEEEEecCCcEEEEEeCCccccCCCCCCCCCCcCCCCCCCCCCCCCceeec-cCCeEEEeceEEEee
Q 006085 174 QGTINMFLRPIEGITIVVDIEEMKVTEYNDREVAPIPKPEPTEYRLSKLKPPFGPRLNSVATSS-TRPGFKINGNTVKWA 252 (662)
Q Consensus 174 ~~~~n~Ya~Pl~g~~~~vD~~~~~vv~i~d~~~~~~p~~~~~~y~~~~~~~~~r~~~kP~~i~q-eG~sf~v~g~~V~W~ 252 (662)
.+++|+|||||+||.++||+.++||++|++.+.+++|... .+|++.. +.|+++||++|+| ||+||+|+||+|+||
T Consensus 251 ~~~~n~Ya~Pl~g~~~vvD~~~~~V~~i~~~~~~~~p~~~-~~y~~~~---~~r~~lkP~~i~QPeG~sF~v~g~~V~W~ 326 (727)
T 1spu_A 251 VGDGNYWAHPIENLVAVVDLEQKKIVKIEEGPVVPVPMTA-RPFDGRD---RVAPAVKPMQIIEPEGKNYTITGDMIHWR 326 (727)
T ss_dssp CSSSCGGGSBCTTEEEEEETTTTEEEEEEECCCCCCCCSC-CCSSSTT---EECCCCCCCEEECTTCCSEEEETTEEEET
T ss_pred CCCCCccccCccceEEEEecccCEEEEEEcCCccccCCCC-CCccccc---cccCCCCCccccCCCCCCEEECCCccccC
Confidence 6679999999999999999999999999987766666543 5787653 4699999999999 999999999999999
Q ss_pred ceEEEEEecCCcceEEEeeEEecCCCCeEeEEEEeeeceeEEeecCCCCCcccceeeeecCCCCcccCCcCCCCCCCCCC
Q 006085 253 NWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPA 332 (662)
Q Consensus 253 ~W~f~vgf~~reGl~L~dv~~~d~~~~~~r~I~yrlsl~Em~vpYgdp~~~~~~k~~~D~geyG~G~~a~~L~~G~DCpg 332 (662)
||+||||||+||||+||||+|+| .|+.||||||+|||||+||||||+++|++|+|||+||||+|.+||+|++||||||
T Consensus 327 ~W~F~vgf~~reGlvL~dV~y~~--~g~~r~V~YrlSl~Em~VPYgdp~~~~~~k~~fD~GeyG~G~~a~~L~lGcDCpg 404 (727)
T 1spu_A 327 NWDFHLSMNSRVGPMISTVTYND--NGTKRKVMYEGSLGGMIVPYGDPDIGWYFKAYLDSGDYGMGTLTSPIARGKDAPS 404 (727)
T ss_dssp TEEEEEEEETTTEEEEEEEEEEE--TTEEEEEEEEEEEEEEEEEBCCCSTTTTTCEECHHHHHCTTTTBCCCCTTTTSCT
T ss_pred CcEEEEecCCCCceEEEEEEEcC--CCceEEEEEEeEeeEEEEeCCCCCCchhcceeeeccCcCCcccccccccCCCCCC
Confidence 99999999999999999999999 7899999999999999999999999999999999999999999999999999999
Q ss_pred ccEEeeeEeecCCCceeEeCceEEEEEeeCCCceecccccCCCCceeecccceEEEEEEEEEecccceEEEEEEecCccE
Q 006085 333 NAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWRHTEAEMPGHVREVRPEVSLVVRMVATVGNYDYIIDWEFKPSGSI 412 (662)
Q Consensus 333 ~~~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~kH~~~~~~~~~~~~r~~~~LVvr~i~TVgNYdYi~~w~F~~DGtI 412 (662)
+|+|||+++++++|+|++++|||||||+| .||||||++++....++ ++++||||+|+|||||||||+|+|||||+|
T Consensus 405 ~i~Y~D~~~~~~~G~p~~~~naiCi~E~d-~G~l~kH~~~~~~~~~~---r~r~LVv~~i~Tv~NYdYi~~w~F~~dG~I 480 (727)
T 1spu_A 405 NAVLLNETIADYTGVPMEIPRAIAVFERY-AGPEYKHQEMGQPNVST---ERRELVVRWISTVGNYDYIFDWIFHENGTI 480 (727)
T ss_dssp TCEEEEEEEECTTSCEEEEEEEEEEEEEE-EEEEEEECCTTSCCEEE---EEEEEEEEEEEEETTEEEEEEEEEETTSCE
T ss_pred CCEEeeeEEEcCCCCEEEeCCeEEEeccc-CCcceeeeccCCCceee---eceEEEEEEEEeecccceEEEEEEecCceE
Confidence 99999999999999999999999999999 56999999998532244 445999999999999999999999999999
Q ss_pred EEEEEEeEEEeeecccccccCcc---ccCCccceecCCccccccceEEEeeeecCCCCCCCceEEEEEEEecCCCCCCCc
Q 006085 413 KMGVGLSGVLEVKPVEYTYVDQI---KEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTNVNTPR 489 (662)
Q Consensus 413 e~~v~aTGil~t~~~~~~~~~~~---~~~~yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~~~np~ 489 (662)
|+||+|||||+|+++.+....+. ++.+|||+|+|+++|++|||+|||||||||||.+|||+++|+++++.+ +.||+
T Consensus 481 ~~ev~aTGil~~~~~~~t~~~~~~~~~~~~yGt~v~~~~~a~~HqH~f~~RlD~dVdG~~Nsv~~~d~~~~~~~-~~np~ 559 (727)
T 1spu_A 481 GIDAGATGIEAVKGVKAKTMHDETAKDDTRYGTLIDHNIVGTTHQHIYNFRLDLDVDGENNSLVAMDPVVKPNT-AGGPR 559 (727)
T ss_dssp EEEEEEEECCCEEECSCSSTTSTTHHHHTTTEEEEETTEEEECEEEEEEEEEEECTTSSEEEEEEEEEEEEECC-SCSSC
T ss_pred EEEEEEEEEEEeccccccccccccccccCCCcceecCCcccccceeEEEEeecccccCCCCeEEEEeeEEccCC-CCCCC
Confidence 99999999999875432111111 236899999999999999999999999999999999999999998875 36999
Q ss_pred ceeEEEEEEEeechhhhhhcCCC-CCcEEEEeCCCCCCCCCCceeEEEcc--CCc----ccCCCCCCChhccccccceee
Q 006085 490 KSYWTVEKETAKTEFEARLNLDT-KPMEFALVNPSKKTKIGHPVGYRLLP--GSI----IGPMLMEDDYPQIRAGFTNYN 562 (662)
Q Consensus 490 ~~~~~~~~~~l~tE~ea~~~~~~-~~r~~~ivN~~~~N~~G~p~gYrl~p--~~~----~~~~~~~~s~~~~ra~fa~~~ 562 (662)
+++|++++++++||++|++++++ ++|+ |+|++++|++|+|+||||+| +++ ++++++++|+..+||+||+|+
T Consensus 560 ~~~~~~~~t~~~tE~~a~~~~~~~~~r~--i~n~~~~N~~G~p~gYkl~~~~~~~~~~~~~~l~~~~s~~~~ra~fa~~~ 637 (727)
T 1spu_A 560 TSTMQVNQYNIGNEQDAAQKFDPGTIRL--LSNPNKENRMGNPVSYQIIPYAGGTHPVAKGAQFAPDEWIYHRLSFMDKQ 637 (727)
T ss_dssp SEEEEEEEEEECBHHHHSBCCCTTSEEE--EEEEEEECTTSCEEEEEEEEEEEESSCBCCSCSSCTTCHHHHHCGGGGCS
T ss_pred CceeEEEEEEccchhhhhhccCCCCcEE--EeCCCCcCCCCCeeeEEEecCCCCccccccccccCCcchhhhhhcccccc
Confidence 99999999999999999999999 7887 99999999999999999999 333 568899999999999999999
Q ss_pred eEEeecCCCCCCCCCcCcCCCCCCCChhccccCCCceeeCCcEEEEEeceecCCCCCCCCcccceeeeeEEEecCCCCCC
Q 006085 563 VWVTPYKKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENTDIVLWYTMGIHHAPCQEDFPVMPTVSCGFELRPTNFFEYN 642 (662)
Q Consensus 563 lwVT~y~~~E~~asg~y~~q~~~~~~l~~~~~~~e~i~~~DiV~W~t~G~~HvPr~ED~Pvmp~~~~~f~L~P~nFFd~n 642 (662)
||||||+|+|+||+|+|+||+++++||++|+++||+|+|+|||||||||+||+||+|||||||++++||+|||+||||+|
T Consensus 638 lwVT~y~d~E~~a~g~y~~q~~~~~gl~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~ED~Pvmp~~~~~f~L~P~nFFd~n 717 (727)
T 1spu_A 638 LWVTRYHPGERFPEGKYPNRSTHDTGLGQYSKDNESLDNTDAVVWMTTGTTHVARAEEWPIMPTEWVHTLLKPWNFFDET 717 (727)
T ss_dssp EEEEECCTTCCCTTCSCCTTCSSCCSHHHHHTTCCBCSSEEEEEEEEEEEEECCCGGGSSSEEEEEEEEEEEEESSSSSC
T ss_pred eEEeccCCcccCCCCCCccCCCCCCCHHHHhhCCCccccCCcEEEEecccccCCChhhCCCCcccEEEEEEEeCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCC
Q 006085 643 PVLKVIPPK 651 (662)
Q Consensus 643 P~ldvp~~~ 651 (662)
|+||+||+.
T Consensus 718 Paldvp~~~ 726 (727)
T 1spu_A 718 PTLGALKKD 726 (727)
T ss_dssp TTSCCBC--
T ss_pred CCcCCCCCC
Confidence 999999874
No 6
>1w7c_A Lysyl oxidase; AMNE oxidase, copper, oxidoreductase, quinoprotein, topaquinone enzyme, TPQ; HET: BMA NAG TPQ IMD; 1.23A {Pichia pastoris} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 PDB: 1rky_A* 1n9e_A*
Probab=100.00 E-value=8.3e-162 Score=1380.40 Aligned_cols=600 Identities=19% Similarity=0.277 Sum_probs=531.1
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcC-CC-------CCeEEEEEEccCCChHHhhhhhccCCCCCCcEEEEEEEeC----
Q 006085 18 SSKRHPLDSLRPSEFTRVQTIVKTSY-PS-------NNLSFHYVGMDEPDKAVVYSWLSNSKTKFPRRAIVIARHN---- 85 (662)
Q Consensus 18 ~~~~HPldpLt~~Ei~~a~~il~~~~-~~-------~~~~f~~i~L~EP~K~~vl~~l~~~~~~p~R~A~vv~~~~---- 85 (662)
+..+|||||||++||++|+++|+++. +. .++.|++|+|+||+|++||+||++++++|+|+|+|+++++
T Consensus 15 ~~~~~p~~~Ls~~E~~aV~~~L~~~l~l~~~~~~~~~dN~i~~VeL~~P~K~~vL~~Ld~~g~~P~R~A~vv~~~~~~~~ 94 (747)
T 1w7c_A 15 APKTNIWTSLAKEEVQEVLDLLHSTYNITEVTKADFFSNYVLWIETLKPNKTEALTYLDEDGDLPPRNARTVVYFGEGEE 94 (747)
T ss_dssp CSSCCTTCCCCHHHHHHHHHHHHHHSCCCCGGGCCTTSEEEEEEEEECCCHHHHHHHHHSCCCCCCCEEEEEEEECSSSS
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhccCCCccccCccccceEEEEECcCCCHHHHHhHhhCCCCCCCceEEEEEEeCCCCC
Confidence 45589999999999999999999883 22 3558999999999999999999988777899999999874
Q ss_pred CeEEEEEEE-CCCCeEEEEEeec---CC---CcC----CCCHHHHHHHHHHHhcChHHHHHH------HhcC-CCCCceE
Q 006085 86 HQTHEIIVD-LSKRSIVSDKVYT---GH---GFP----LLTLEEQHAGAALVLAYEPFKASV------KKRG-LNISDVV 147 (662)
Q Consensus 86 ~~~~e~vV~-L~~~~v~~~~~~~---~~---~~p----~~~~~e~~~~e~~~~~~p~~~~~~------~~~g-i~~~~v~ 147 (662)
+..+|++|+ |+.+++++++.+. +. .+| +++.+|+.+++++|+ .+++++ +++| +....
T Consensus 95 ~~~~E~vV~PL~~~~v~~~~~~~~~~~~g~~~~p~~~r~~~~~E~~~~e~~~~---~~~~~~~~~~l~~~~g~~~~~~-- 169 (747)
T 1w7c_A 95 GYFEELKVGPLPVSDETTIEPLSFYNTNGKSKLPFEVGHLDRIKSAAKSSFLN---KNLNTTIMRDVLEGLIGVPYED-- 169 (747)
T ss_dssp CEEEEEEEESSSCCTTCEEEECCTTCTTCCSEEEGGGCCCCHHHHHHHHHHHH---HHHTSHHHHHHHHHHHSSCGGG--
T ss_pred CceEEEEEcCCCCCcEEEEEeccccCCCCcccCCcccCCCCHHHHHHHHHHHH---HHHHHHhhccchhhcCCcccce--
Confidence 567899999 9999997777763 33 468 899999999999998 666666 6788 74433
Q ss_pred Ecccccccc--CCCCCeeEEEEEEEEeeCCCCCcccCcCCCeEEEEecC-----CcEEEEEeCCc---------------
Q 006085 148 CSASTVGWY--GEKKSKRVLKFPCFYTDQGTINMFLRPIEGITIVVDIE-----EMKVTEYNDRE--------------- 205 (662)
Q Consensus 148 ~d~w~~G~~--~~~~~rRl~~~~~~~~~~~~~n~Ya~Pl~g~~~~vD~~-----~~~vv~i~d~~--------------- 205 (662)
|++|++|.. +..++||++|++||....+ +|+|+||| ||+++||++ ++||++|++.+
T Consensus 170 l~~w~~~~~~~~~~~g~R~~~~~~~r~~~~-~n~Y~~Pl-g~~~~vD~~~~D~~~~~V~~v~~~g~~~~s~~el~~~~~~ 247 (747)
T 1w7c_A 170 MGCHSAAPQLHDPATGATVDYGTCNINTEN-DAENLVPT-GFFFKFDMTGRDVSQWKMLEYIYNNKVYTSAEELYEAMQK 247 (747)
T ss_dssp EEEEECSSCEECTTTCCEEEEEEEEECCSS-SCGGGCEE-EEEEEEECCSSCGGGCEEEEEEETTEEESSHHHHHHHHHS
T ss_pred eeeecccCCcCCCCCCceEEEEEEEEecCC-CCccccce-eeEEEEeCCCCCcccCEEEEEEECCcccCchhhhhhhhcc
Confidence 888987743 3335799999999755334 89999999 799999997 58999986543
Q ss_pred --cc---cCCCCCCCCC---CcCC-CCC--CCCCCCCCceeec-cCCeEEEeceE--EEeeceEEEEEecCCcceEEEee
Q 006085 206 --VA---PIPKPEPTEY---RLSK-LKP--PFGPRLNSVATSS-TRPGFKINGNT--VKWANWVFNVGFDARVGTIISTA 271 (662)
Q Consensus 206 --~~---~~p~~~~~~y---~~~~-~~~--~~r~~~kP~~i~q-eG~sf~v~g~~--V~W~~W~f~vgf~~reGl~L~dv 271 (662)
.+ ++| ..+| .+.. ..+ +.|+++||++|+| ||+||+|+|++ |+||||+||||||+||||+||||
T Consensus 248 ~g~v~~~~~p---~~~~~~~~~~~~~~g~~~~r~~lkp~~i~QPeG~sF~v~g~~~yV~W~~W~f~vgf~~reGlvL~dv 324 (747)
T 1w7c_A 248 DDFVTLPKID---VDNLDWTVIQRNDSAPVRHLDDRKSPRLVEPEGRRWAYDGDEEYFSWMDWGFYTSWSRDTGISFYDI 324 (747)
T ss_dssp TTCCCCCCCC---TTCCGGGCCSCCTTSCCCTTTTSCCCCCCCTTCCCCEEETTTTEEEETTEEEEEEEETTTEEEEEEE
T ss_pred cCcccccccC---CCCCcccchhhcccCCCCcccCCCCCcccCCCCCCEEEeCCccceeccCCeEEEecCCCCceEEEee
Confidence 11 232 2232 2223 222 4689999999999 99999999999 99999999999999999999999
Q ss_pred EEecCCCCeEeEEEEeeeceeEEeecCCCCCcccceeeeecCCCCcccCCcCCCCCCCCCCccEEeeeEeecCCCceeEe
Q 006085 272 SIYDINMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKT 351 (662)
Q Consensus 272 ~~~d~~~~~~r~I~yrlsl~Em~vpYgdp~~~~~~k~~~D~geyG~G~~a~~L~~G~DCpg~~~YlD~~~~~~~g~p~~~ 351 (662)
+|++ ||||||+|||||+||||||+|.|++|+|||+| ||+|. ||+|++||||||+|+|||++++ ++|+|+++
T Consensus 325 ~y~g------r~V~YrlSl~Em~VPYgdp~p~~~~~~~~D~g-yG~G~-a~~L~~GcDCpg~i~Y~D~~~~-~~G~p~~~ 395 (747)
T 1w7c_A 325 TFKG------ERIVYELSLQELIAEYGSDDPFNQHTFYSDIS-YGVGN-RFSLVPGYDCPSTAGYFTTDTF-EYDEFYNR 395 (747)
T ss_dssp EETT------EEEEEEEEEEEEEEEECCSSTTGGGCEEEHHH-HCSSS-SCCCCBTTTBCTTCEEEEEEEE-ETTEEEEE
T ss_pred eECC------EEEEEEEEeeeEEeccCCCCchhheeeeeccc-cCccc-ccccccCCCCCCCCEEeeeEEe-cCCCeEEc
Confidence 9987 99999999999999999999999999999999 99999 9999999999999999999999 99999999
Q ss_pred CceEEEEEeeCCCceecccccCCCCceeecccceEEEEEEEEEecccceEEEEEEecCccEEEEEEEeEEEeeecccccc
Q 006085 352 PNAVCIFERHAGDVMWRHTEAEMPGHVREVRPEVSLVVRMVATVGNYDYIIDWEFKPSGSIKMGVGLSGVLEVKPVEYTY 431 (662)
Q Consensus 352 ~naiCi~E~d~~g~l~kH~~~~~~~~~~~~r~~~~LVvr~i~TVgNYdYi~~w~F~~DGtIe~~v~aTGil~t~~~~~~~ 431 (662)
+|||||||+|.|.|||||+++ +. +.++++++||||+|+|||||||||+|+|||||+|+++|+|||||++... .
T Consensus 396 ~naiCihE~d~G~pl~kH~~~--~~--~~v~r~r~LVvr~i~TVgNYdYif~w~F~qdG~Ie~ev~aTGil~t~~~---~ 468 (747)
T 1w7c_A 396 TLSYCVFENQEDYSLLRHTGA--SY--SAITQNPTLNVRFISTIGNADYNFLYKFFLDGTLEVSVRAAGYIQAGYW---N 468 (747)
T ss_dssp EEEEEEEEEECSSCSEEEEET--TE--EEEECCEEEEEEEEECCCC-CEEEEEEECTTSCEEEEEEECBCCCCEEC---C
T ss_pred CceEEEEEEeCCeeeEEeccC--Cc--ceeeeCceEEEEEEEeccccceEEEEEEecCCeEEEEEEeeEEEecccc---C
Confidence 999999999966679999998 22 3455666999999999999999999999999999999999999996542 2
Q ss_pred cCccccCCccceecCCccccccceEEEeeeecCCCCCCCceEEEEEEEecCCCCCCCcce-----eEEEEEEEeechhhh
Q 006085 432 VDQIKEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTNVNTPRKS-----YWTVEKETAKTEFEA 506 (662)
Q Consensus 432 ~~~~~~~~yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~~~np~~~-----~~~~~~~~l~tE~ea 506 (662)
.+ ++.+|||+|+|+++|++|||+|||||||||||++|||+++|+++++.+ ||+++ +|++++++++||++|
T Consensus 469 ~~--~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~---np~~~~~~~~~~~~~~t~~~tE~~a 543 (747)
T 1w7c_A 469 PE--TSAPYGLKIHDVLSGSFHDHVLNYKVDLDVGGTKNRASQYVMKDVDVE---YPWAPGTVYNTKQIAREVFENEDFN 543 (747)
T ss_dssp TT--TCGGGCCEEETTEECCCEEEEEEEEEEECTTSSEEEEEEEEEEEEEEE---CTTSTTCEEEEEEEEEEECCBCCTT
T ss_pred CC--CcCCCcceecCCcccCccceEEEEEeccccCCCCCEEEEEeeEEcccC---CCCCcccccceeEEEEEEccchhhh
Confidence 22 247899999999999999999999999999999999999999998864 78877 899999999999999
Q ss_pred hhcCC-C-CCcEEEEeCCCCCCCCCCceeEEEccCCc-ccCCCCCCChhccccccceeeeEEeecCCCCCCCCCcCcCCC
Q 006085 507 RLNLD-T-KPMEFALVNPSKKTKIGHPVGYRLLPGSI-IGPMLMEDDYPQIRAGFTNYNVWVTPYKKSEKYSGGNYVDQS 583 (662)
Q Consensus 507 ~~~~~-~-~~r~~~ivN~~~~N~~G~p~gYrl~p~~~-~~~~~~~~s~~~~ra~fa~~~lwVT~y~~~E~~asg~y~~q~ 583 (662)
+++++ . ++|+| |+|++++|++|+|+||||+|+++ ++++++++|+..+||+||+|+||||||+++|+||||+|++|+
T Consensus 544 ~~~~~~~~~~r~~-ivN~~~~N~~G~p~gYkl~p~~~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~aag~ynq~~ 622 (747)
T 1w7c_A 544 GINWPENGQGILL-IESAEETNSFGNPRAYNIMPGGGGVHRIVKNSRSGPETQNWARSNLFLTKHKDTELRSSTALNTNA 622 (747)
T ss_dssp CBCCCGGGCEEEE-EEEEEEECTTSCEEEEEEEECTTCCCCSCSSCTTCSSSCGGGGSSEEEEECCTTCCCSCCTTCTTC
T ss_pred hhcCCCCCCceEE-EeCCCccCCCCCcceEEEecCCCCcccccCCCchhhhcchhccCcEEEecCCCCccCCCCCccccC
Confidence 99999 5 79999 99999999999999999999999 999999999999999999999999999999999999996666
Q ss_pred CCCC--ChhccccCCCceeeCCcEEEEEeceecCCCCCCCCcc--cceeeeeEEEecCCCCCCCCCCCCCC
Q 006085 584 HGDD--TLLQWTDGNREIENTDIVLWYTMGIHHAPCQEDFPVM--PTVSCGFELRPTNFFEYNPVLKVIPP 650 (662)
Q Consensus 584 ~~~~--~l~~~~~~~e~i~~~DiV~W~t~G~~HvPr~ED~Pvm--p~~~~~f~L~P~nFFd~nP~ldvp~~ 650 (662)
.+++ +|++|+ +||+|+|+|||||||||+||+||+|||||| |++++||+|||+|||++||+||+|++
T Consensus 623 ~~~~~~~~~~~~-~~e~I~n~DiVlW~t~G~~HiPr~ED~PvM~tP~~~~gf~LrP~nFF~~nP~ldvp~~ 692 (747)
T 1w7c_A 623 LYDPPVNFNAFL-DDESLDGEDIVAWVNLGLHHLPNSNDLPNTIFSTAHASFMLTPFNYFDSENSRDTTQQ 692 (747)
T ss_dssp SSSCSCCGGGGC-SCCBCTTEEEEEEEEEEEEECCCGGGSSCBCSSSSEEEEEEEEESSSSSCTTTTCSSE
T ss_pred CCCCCcchhhhh-CCCccccCceEEEEecccccCCChhhcCCcCCCcceEEEEEEeCCcCCCCCCccCCCc
Confidence 6555 378999 999999999999999999999999999999 77999999999999999999999987
No 7
>1tu5_A Copper amine oxidase, liver isozyme; oxidoreductase, quinoenzyme, TPQ; HET: TPQ NAG NDG; 2.37A {Bos taurus} PDB: 2pnc_A* 3ala_A* 2y73_A* 1pu4_A* 1us1_A* 2y74_A* 2c10_A* 2c11_A*
Probab=100.00 E-value=7.2e-162 Score=1382.63 Aligned_cols=608 Identities=23% Similarity=0.333 Sum_probs=514.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcC---CC-------CCeEEEEEEccCCChHHhhhhhccCCCCCCcEEEEEEEeC---
Q 006085 19 SKRHPLDSLRPSEFTRVQTIVKTSY---PS-------NNLSFHYVGMDEPDKAVVYSWLSNSKTKFPRRAIVIARHN--- 85 (662)
Q Consensus 19 ~~~HPldpLt~~Ei~~a~~il~~~~---~~-------~~~~f~~i~L~EP~K~~vl~~l~~~~~~p~R~A~vv~~~~--- 85 (662)
..+|||||||++||++|+++|.++. +. .++.|.+|+|+||+|++||+||++++++|+|+|+|+++++
T Consensus 38 ~~~~~~~~Ls~~E~~~V~~~L~~~~~l~L~~~~~a~~~dn~i~~IeL~~P~K~~vL~~Ld~~~~~P~R~A~vv~~~~~~~ 117 (746)
T 1tu5_A 38 DQSQLFADLSREELTTVMSFLTQQLGPDLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGSPPPAREALAIVFFGGQP 117 (746)
T ss_dssp ---CCSSCCCHHHHHHHHHHHHHHHCSSCBCTTTCCTTSEEEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEEECSSS
T ss_pred CCCCcCCCCCHHHHHHHHHHHhccCccCccccccCCccccEEEEEECCCCCHHHhhhhhcCCCCCCCccEEEEEEeCCCC
Confidence 3479999999999999999998874 22 2478899999999999999999988778899999999985
Q ss_pred -CeEEEEEEE-CCCCeEEEEEeec--CCCcC----CCCHHHHHHHHHHHhcChHHHHHHHhcCC-CCCc--eEEcccccc
Q 006085 86 -HQTHEIIVD-LSKRSIVSDKVYT--GHGFP----LLTLEEQHAGAALVLAYEPFKASVKKRGL-NISD--VVCSASTVG 154 (662)
Q Consensus 86 -~~~~e~vV~-L~~~~v~~~~~~~--~~~~p----~~~~~e~~~~e~~~~~~p~~~~~~~~~gi-~~~~--v~~d~w~~G 154 (662)
+.++|++|+ |+.+++++....+ ++.+| +++.+|+.+++++|+++|++++++.++|+ ++.. ++|++|..|
T Consensus 118 ~~~v~E~vV~PL~~~~~~~~~~~~~~~~~~p~~~r~i~~~E~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~ 197 (746)
T 1tu5_A 118 QPNVTELVVGPLPQPSYMRDVTVERHGGPLPYYRRPVLLREYLDIDQMIFNRELPQAAGVLHHCCSYKQGGQKLLTMNSA 197 (746)
T ss_dssp SCEEEEEEEESSSSCCEEEECHHHHHSSCEEGGGSCCCHHHHHHHHHHHHHTTGGGGHHHHHHHHCTTTTCCCEEEECCS
T ss_pred CCceEEEEecCCCCCcEEEEcccCCCCCcCCcccCCCCHHHHHHHHHHHHHCHHHHHHHHHhcCCCcccCCEEEeCcccc
Confidence 457899999 9999875443113 34578 99999999999999999999999999776 2222 889999666
Q ss_pred ccCCCCCeeEEEEEEEEeeCCCCCcccCcCCCeEEEEecC-----CcEEEEEeCCcc-----------------ccCCCC
Q 006085 155 WYGEKKSKRVLKFPCFYTDQGTINMFLRPIEGITIVVDIE-----EMKVTEYNDREV-----------------APIPKP 212 (662)
Q Consensus 155 ~~~~~~~rRl~~~~~~~~~~~~~n~Ya~Pl~g~~~~vD~~-----~~~vv~i~d~~~-----------------~~~p~~ 212 (662)
..+..+++|++|++||....+ +|+|+||| ||+++||++ ++||++|++.+. .+++..
T Consensus 198 p~~~~~g~R~~~~~~~r~~~~-~n~Y~~Pl-g~~~~vD~~~~D~~~~~V~~i~y~g~~~~s~~el~~~~~~g~~~~~~~p 275 (746)
T 1tu5_A 198 PRGVQSGDRSTWFGIYYNITK-GGPYLHPV-GLELLVDHKALDPADWTVQKVFFQGRYYENLAQLEEQFEAGQVNVVVIP 275 (746)
T ss_dssp SCSSSTTCCEEEEEEEECCSS-SCGGGSEE-EEEEEEECCSSSGGGCEEEEEEETTEEESSHHHHHHHHHTTCCCCCCCC
T ss_pred CCcCCCCcEEEEEEEEEecCC-CCccccce-eeEEEEeCCCCCcccCEEEEEEECCCccCchhhhhcccccCCcccccCc
Confidence 433335799999999755333 89999999 799999997 699999985431 011211
Q ss_pred CCCCCCcCC--CCCC-CCCCCCCceeec-cCCeEEEeceEEEeeceEEEEEecCCcceEEEeeEEecCCCCeEeEEEEee
Q 006085 213 EPTEYRLSK--LKPP-FGPRLNSVATSS-TRPGFKINGNTVKWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRG 288 (662)
Q Consensus 213 ~~~~y~~~~--~~~~-~r~~~kP~~i~q-eG~sf~v~g~~V~W~~W~f~vgf~~reGl~L~dv~~~d~~~~~~r~I~yrl 288 (662)
.+|.+.. .... .|+++ |++|+| ||+||+|+|++|+||||+||||||+||||+||||+|++ ||||||+
T Consensus 276 --~~~~~~~~~~~~~~~r~~~-p~~i~QPeG~sF~v~g~~V~W~~W~f~vgf~~reGlvL~dv~y~g------r~V~Yrl 346 (746)
T 1tu5_A 276 --DDGTGGFWSLKSQVPPGPT-PPLQFHPQGPRFSVQGNRVASSLWTFSFGLGAFSGPRVFDVRFQG------ERLAYEI 346 (746)
T ss_dssp --C-----------------------------CEEEETTEEEESSEEEEEEEETTTEEEEEEEEETT------EEEEEEE
T ss_pred --cccCcccccccccccCCCC-CcceeCCCCCCEEecCCcccCCCcEEEEecCCCCceEEEeeEECC------eeEEEEE
Confidence 1244332 2211 35555 999999 99999999999999999999999999999999999987 9999999
Q ss_pred eceeEEeecCCCCCcccceeeeecCCCCcccCCcCCCCCCCCCCccEEeeeEeecCCCceeEeCceEEEEEeeCCCceec
Q 006085 289 FISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWR 368 (662)
Q Consensus 289 sl~Em~vpYgdp~~~~~~k~~~D~geyG~G~~a~~L~~G~DCpg~~~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~k 368 (662)
|||||+||||||+|.+.+|+|||++ ||+|.+||+|++||||||+|+|||+++++++|+|++++|||||||+|.|.||||
T Consensus 347 Sl~Em~VPYgdp~p~~~~~~~~D~~-yG~G~~a~~L~~GcDCpg~i~Y~D~~~~~~~G~p~~~~naiCihE~d~G~~lwk 425 (746)
T 1tu5_A 347 SLQEAGAVYGGNTPAAMLTRYMDSG-FGMGYFATPLIRGVDCPYLATYMDWHFVVESQTPKTLHDAFCVFEQNKGLPLRR 425 (746)
T ss_dssp EEEEEEEEECCSSHHHHHCEEEGGG-TCTTTTBCCCCBTTTBCTTSEEEEEEEEESSSSCEEEEEEEEEEEEEEEEEEEE
T ss_pred EeeeEEeecCCCCchhhcceeeccc-cCcccccccCccCCCCCCCCEEEeeEEecCCCCEEEcCCeEEEEEeeCCeeeee
Confidence 9999999999999999999999985 999999999999999999999999999999999999999999999996556999
Q ss_pred ccccCCCCceeecccceEEEEEEEEEecccceEEEEEEecCccEEEEEEEeEEEeeecccccccCccccCCccceecCCc
Q 006085 369 HTEAEMPGHVREVRPEVSLVVRMVATVGNYDYIIDWEFKPSGSIKMGVGLSGVLEVKPVEYTYVDQIKEDQHGTLVADNS 448 (662)
Q Consensus 369 H~~~~~~~~~~~~r~~~~LVvr~i~TVgNYdYi~~w~F~~DGtIe~~v~aTGil~t~~~~~~~~~~~~~~~yGt~V~~~~ 448 (662)
|+|.+..+. +.+|++++||||+|+|||||||||+|+|||||+||++|+|||||+|... ..+ +.+|||+|++++
T Consensus 426 H~~~~~~~~-~~v~r~r~LVvr~i~TVgNYdYi~~w~F~qdG~Ie~ev~aTGil~t~~~---~~~---~~~yGt~V~~~v 498 (746)
T 1tu5_A 426 HHSDFLSHY-FGGVAQTVLVFRSVSTMLNADYVWDMVFYPNGAIEVKLHATGYISSAFL---FGA---ARRYGNQVGEHT 498 (746)
T ss_dssp CCCSTTCCC-CCEEEEEEEEEEEEEEETTEEEEEEEEECTTSCEEEEEEEEECCCCEEC---CTT---GGGGEEEEETTE
T ss_pred ecccccCCc-eeeecccEEEEEEEEeecccceEEEEEEecCCcEEEEEEecceEeeeec---CCC---CCCCcceecCCc
Confidence 999443322 3344566999999999999999999999999999999999999996542 111 467999999999
Q ss_pred cccccceEEEeeeecCCCCCCCceEEEEEEEecCCCCCCCccee-----EEEEEEEeechhhhhhcCCC-CCcEEEEeCC
Q 006085 449 IAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTNVNTPRKSY-----WTVEKETAKTEFEARLNLDT-KPMEFALVNP 522 (662)
Q Consensus 449 ~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~~~np~~~~-----~~~~~~~l~tE~ea~~~~~~-~~r~~~ivN~ 522 (662)
+|++|||+|+|||||||||.+|||+++|+++++.+ ||++++ |++++++++||++|+++++. ++|+| |+|+
T Consensus 499 ~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~---np~~~~~~~~~~~~~~t~~~tE~~a~~~~~~~~~r~~-ivn~ 574 (746)
T 1tu5_A 499 LGPVHTHSAHYKVDLDVGGLENWVWAEDMAFVPTA---IPWSPEHQIQRLQVTRKQLETEEQAAFPLGGASPRYL-YLAS 574 (746)
T ss_dssp EEECEEEEEEEEEEECTTSSEEEEEEEEEEEEEEE---ETTEEEEEEEEEEEEEEECCBGGGGEEETTSCCCSEE-EEEE
T ss_pred cccccceEEEEEecccccCCCCEEEEEeeEEcccC---CCCCcccccceeEEEEEEeeehhhhccccCCCCceEE-EeCC
Confidence 99999999999999999999999999999998863 899888 89999999999999999999 89999 9999
Q ss_pred CCCCCCCCceeEEEccCCcccCCCCCCChhccccccceeeeEEeecCCCCCCCCCcCcCCCCCCC--ChhccccCCCcee
Q 006085 523 SKKTKIGHPVGYRLLPGSIIGPMLMEDDYPQIRAGFTNYNVWVTPYKKSEKYSGGNYVDQSHGDD--TLLQWTDGNREIE 600 (662)
Q Consensus 523 ~~~N~~G~p~gYrl~p~~~~~~~~~~~s~~~~ra~fa~~~lwVT~y~~~E~~asg~y~~q~~~~~--~l~~~~~~~e~i~ 600 (662)
+++|++|+|+||||+|+++++++++++|...+||+||+|+||||||+|+|+||||.|++|+.+++ +|++|+ +||+|+
T Consensus 575 ~~~N~~G~p~gYkl~p~~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~aag~ynq~~~~~~~~~~~~~~-~~e~I~ 653 (746)
T 1tu5_A 575 KQSNKWGHPRGYRIQTVSFAGGPMPQNSPMERAFSWGRYQLAITQRKETEPSSSSVFNQNDPWTPTVDFSDFI-NNETIA 653 (746)
T ss_dssp EEECTTSCEEEEEEEEECBCCCCCCTTSTTGGGGGGGGEEEEEEECCTTCCCSSCTTTTTCTTSCSCCGGGGC-SCCBCS
T ss_pred CCcCCCCCcceEEECcCCcccccCCCcchhhccccccccceEEeccCCCcccCCccccccCCCCCCccHhhhc-CCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999976666655 478999 999999
Q ss_pred eCCcEEEEEeceecCCCCCCCCcc--cceeeeeEEEecCCCCCCCCCCCCCC
Q 006085 601 NTDIVLWYTMGIHHAPCQEDFPVM--PTVSCGFELRPTNFFEYNPVLKVIPP 650 (662)
Q Consensus 601 ~~DiV~W~t~G~~HvPr~ED~Pvm--p~~~~~f~L~P~nFFd~nP~ldvp~~ 650 (662)
|+|||||||||+||+||+|||||| |++++||+|||+||||+||+||+|++
T Consensus 654 n~DiV~W~t~G~~HiPr~ED~PvM~tp~~~~gf~LrP~nFF~~nP~ld~p~~ 705 (746)
T 1tu5_A 654 GKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDQEPSMDSADS 705 (746)
T ss_dssp SEEEEEEEEEEEEECCCGGGSSCBCCCSCCEEEEEEEESSSSSSCCCC----
T ss_pred CCceEEEEecccccCCChhccCccCCCccEEEEEEEeCCCCCCCCcccCCCc
Confidence 999999999999999999999999 77999999999999999999999998
No 8
>3hi7_A Amiloride-sensitive amine oxidase; oxidoreductase, copper amine oxidase, topaquinone, TPQ, DIAM oxidase, DAO, human, glycoprotein, heparin-binding; HET: TPQ NAG BMA; 1.80A {Homo sapiens} PDB: 3hig_A* 3hii_A* 3k5t_A* 3mph_A*
Probab=100.00 E-value=8.2e-153 Score=1302.05 Aligned_cols=608 Identities=25% Similarity=0.344 Sum_probs=512.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcC---CC-------CCeEEEEEEccCCChHHhhhhhccCCCCCCcEEEEEEEeCCe---
Q 006085 21 RHPLDSLRPSEFTRVQTIVKTSY---PS-------NNLSFHYVGMDEPDKAVVYSWLSNSKTKFPRRAIVIARHNHQ--- 87 (662)
Q Consensus 21 ~HPldpLt~~Ei~~a~~il~~~~---~~-------~~~~f~~i~L~EP~K~~vl~~l~~~~~~p~R~A~vv~~~~~~--- 87 (662)
+-+|++||++|+++|.++|.++. +. .++++.+|+|+.|+|+++|+|||+++++|+|+|+|+++++++
T Consensus 10 ~~vf~dLs~~E~~~V~~~L~~~~~l~Lt~~~~a~~~dN~i~~iEl~~P~K~~vL~~LD~~~~~P~R~A~vvi~fG~~~~P 89 (731)
T 3hi7_A 10 AGVFSDLSNQELKAVHSFLWSKKELRLQPSSTTTMAKNTVFLIEMLLPKKYHVLRFLDKGERHPVREARAVIFFGDQEHP 89 (731)
T ss_dssp GGGGCCCCHHHHHHHHHHHHTCGGGCBCCTTSSCSSSEEEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEEECSSSSC
T ss_pred CCccccCCHHHHHHHHHHHhcCCCCCCcccccCCccCCeEEEEEecCCCchhhhhhhcCCCCCCCcceEEEEEcCCCCCC
Confidence 45699999999999999999873 21 578999999999999999999999988899999999999654
Q ss_pred -EEEEEE-ECCCCeEEEEEeecCCCc------CCCCHHHHHHHHHHHhc-----ChHHHHHHHhcCCCCCceEEccc---
Q 006085 88 -THEIIV-DLSKRSIVSDKVYTGHGF------PLLTLEEQHAGAALVLA-----YEPFKASVKKRGLNISDVVCSAS--- 151 (662)
Q Consensus 88 -~~e~vV-~L~~~~v~~~~~~~~~~~------p~~~~~e~~~~e~~~~~-----~p~~~~~~~~~gi~~~~v~~d~w--- 151 (662)
..|++| +|+.++.++... ++.+. .+++..|+.++.+++.+ ...+++.+ ...++.+.-.|..+
T Consensus 90 ~v~Ey~VGPLP~p~~~~~l~-~~~~~~~p~~~R~~~~~e~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~cL~~~~~ 167 (731)
T 3hi7_A 90 NVTEFAVGPLPGPCYMRALS-PRPGYQSSWASRPISTAEYALLYHTLQEATKPLHQFFLNTT-GFSFQDCHDRCLAFTDV 167 (731)
T ss_dssp EEEEEEEECSSSCCEEEEES-CCTTCCCHHHHSCCCHHHHHHHHHHHHHHTGGGHHHHHHHH-SCBSSSCSSSBEEEEEC
T ss_pred eeEEEEEcCCCCCCeeeecc-cCCCCcCCcccCCCcHHHHHHHHHHHHHHHhHHHHHHHHHh-CceecCCCCCEEeeecC
Confidence 569999 699998776654 43332 34677777777666543 23333333 12223222223322
Q ss_pred -cccccCCCCCeeEEEEEEEEeeCCCCCcccCcCCCeEEEEecCC-----cEEEEEe-----------------CCcccc
Q 006085 152 -TVGWYGEKKSKRVLKFPCFYTDQGTINMFLRPIEGITIVVDIEE-----MKVTEYN-----------------DREVAP 208 (662)
Q Consensus 152 -~~G~~~~~~~rRl~~~~~~~~~~~~~n~Ya~Pl~g~~~~vD~~~-----~~vv~i~-----------------d~~~~~ 208 (662)
+.| +.+ ++||+| +.+.| . .+++|.||+ ||+++||+.+ |+|.+|- ++....
T Consensus 168 ~P~~-~~s-g~r~~W--~~~~~-~-~~g~~l~P~-gl~~~vDh~~~Dps~W~v~~v~Yng~~y~s~eel~~~y~~g~~~~ 240 (731)
T 3hi7_A 168 APRG-VAS-GQRRSW--LIIQR-Y-VEGYFLHPT-GLELLVDHGSTDAGHWAVEQVWYNGKFYGSPEELARKYADGEVDV 240 (731)
T ss_dssp SSCS-SST-TCCEEE--EEEEE-C-STTGGGCEE-EEEEEEECCSSSGGGCEEEEEEETTEECSSHHHHHHHHHTTCCCC
T ss_pred CCCc-cCC-CCEEEe--hheec-c-CCCceeecc-ceEEEEecCCCChHHcEEEEEEECCEecCCHHHHHHHHhCCCeeE
Confidence 234 222 456665 55666 3 346899999 8999999997 7887774 222211
Q ss_pred ----CCCCCCC---------CCCcCCCCC--CCCCCCCCceeec-cCCeEEEeceEEEeeceEEEEEecCCcceEEEeeE
Q 006085 209 ----IPKPEPT---------EYRLSKLKP--PFGPRLNSVATSS-TRPGFKINGNTVKWANWVFNVGFDARVGTIISTAS 272 (662)
Q Consensus 209 ----~p~~~~~---------~y~~~~~~~--~~r~~~kP~~i~q-eG~sf~v~g~~V~W~~W~f~vgf~~reGl~L~dv~ 272 (662)
.|..++. .|..-.+++ +.++++||++|+| ||+||+|+||+|+||||+||||||+||||+||||+
T Consensus 241 ~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~~~~~kp~~i~QPeG~sF~V~g~~V~W~~W~F~vgfn~reGlvL~dV~ 320 (731)
T 3hi7_A 241 VVLEDPLPGGKGHDSTEEPPLFSSHKPRGDFPSPIHVSGPRLVQPHGPRFRLEGNAVLYGGWSFAFRLRSSSGLQVLNVH 320 (731)
T ss_dssp CCCCCCC----------CCCCTTSCCCCSCCSBCCCSCCCEEECTTCCSSEEETTEEEEBTEEEEEEEETTTEEEEEEEE
T ss_pred eccCCCCCcccccccccccccccccccCCCCCCCCCCCCcceeCCCCCCEEEeCCEEEecCcEEEEecCCCCCcEEEeEE
Confidence 1222110 132112223 3368999999999 99999999999999999999999999999999999
Q ss_pred EecCCCCeEeEEEEeeeceeEEeecCCCCCcccceeeeecCCCCcccCCcCCCCCCCCCCccEEeeeEeecCCCceeEeC
Q 006085 273 IYDINMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTP 352 (662)
Q Consensus 273 ~~d~~~~~~r~I~yrlsl~Em~vpYgdp~~~~~~k~~~D~geyG~G~~a~~L~~G~DCpg~~~YlD~~~~~~~g~p~~~~ 352 (662)
|+| |||+||+|||||+||||||++++++|+|||+| ||+|.+||+|++||||||+|+|||+++.+++|+|++++
T Consensus 321 y~g------r~v~YrlSlsEm~VpYgdp~p~~~~k~~fD~G-yG~G~~an~L~lGcDCpg~i~YlD~~~~~~~G~p~~~~ 393 (731)
T 3hi7_A 321 FGG------ERIAYEVSVQEAVALYGGHTPAGMQTKYLDVG-WGLGSVTHELAPGIDCPETATFLDTFHYYDADDPVHYP 393 (731)
T ss_dssp ETT------EEEEEEEEEEEEEEEECCSSHHHHHCEEEGGG-GTGGGCCCCCCBTTTBCTTSEEEEEEEEESCSSCEEEE
T ss_pred ECC------eeEEEEeeeeeeEEccCCCCCccccceeeecC-cCccccccccccCCCCCCCCEEEeeEEecCCCCEEecC
Confidence 998 99999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred ceEEEEEeeCCCceecccc--cCCCCceeecccceEEEEEEEEEecccceEEEEEEecCccEEEEEEEeEEEeeeccccc
Q 006085 353 NAVCIFERHAGDVMWRHTE--AEMPGHVREVRPEVSLVVRMVATVGNYDYIIDWEFKPSGSIKMGVGLSGVLEVKPVEYT 430 (662)
Q Consensus 353 naiCi~E~d~~g~l~kH~~--~~~~~~~~~~r~~~~LVvr~i~TVgNYdYi~~w~F~~DGtIe~~v~aTGil~t~~~~~~ 430 (662)
|||||||+|.|.++|||++ ++++..++.++++++||||+|+|||||||||+|+|||||+||+||||||||++...
T Consensus 394 naICihE~d~Gi~~~kHtd~~~r~~~~~~~~~r~r~LVvr~I~TVgNYDYif~w~F~qdGsIe~eVraTGilst~~~--- 470 (731)
T 3hi7_A 394 RALCLFEMPTGVPLRRHFNSNFKGGFNFYAGLKGQVLVLRTTSTVYNADYIWDFIFYPNGVMEAKMHATGYVHATFY--- 470 (731)
T ss_dssp EEEEEEEEECSSCSEEEEEECSSSSEEEEEEECCEEEEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEECCCEEEC---
T ss_pred CEEEEEEeeCCeeEEEecccccCCccceeecccccEEEEEEeeecccccEEEEEEEecCCeEEEEEEEEEEEeeccc---
Confidence 9999999997767999976 45432245577788999999999999999999999999999999999999997542
Q ss_pred ccCccccCCccceecCCccccccceEEEeeeecCCCCCCCceEEEEEEEecCCCCCCCcc--eeEEEEEEEeechhhhhh
Q 006085 431 YVDQIKEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTNVNTPRK--SYWTVEKETAKTEFEARL 508 (662)
Q Consensus 431 ~~~~~~~~~yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~~~np~~--~~~~~~~~~l~tE~ea~~ 508 (662)
..+ +.+|||+|+|+++|++|||+|||||||||||.+|||+++|+++++.+.+++|.. +++++++++++||++|++
T Consensus 471 ~~~---~~~yGt~V~p~v~a~~HqH~f~~RlD~dIDG~~Nsv~~~d~~~~~~~nP~~~~~~~~~~~~~~t~l~tE~ea~~ 547 (731)
T 3hi7_A 471 TPE---GLRHGTRLHTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLENITNPWSPRHRVVQPTLEQTQYSWERQAAF 547 (731)
T ss_dssp CGG---GGGSEEEEETTEEEECEEEEEEEEEEECTTSSEEEEEEEEEEEEEEECTTCTTSEEEEEEEEEEEECBGGGGCB
T ss_pred CCC---CCCCcceecCCcccccceeEEEEEeccccCCCCCEEEEEeceecCCCCCCCCCccceeEEEEEEEccchhhhhh
Confidence 122 368999999999999999999999999999999999999999998766677764 668999999999999999
Q ss_pred cCCC-CCcEEEEeCCCCCCCCCCceeEEEccCCcccCCCCCCChhccccccceeeeEEeecCCCCCCCCCcCcCCCCCCC
Q 006085 509 NLDT-KPMEFALVNPSKKTKIGHPVGYRLLPGSIIGPMLMEDDYPQIRAGFTNYNVWVTPYKKSEKYSGGNYVDQSHGDD 587 (662)
Q Consensus 509 ~~~~-~~r~~~ivN~~~~N~~G~p~gYrl~p~~~~~~~~~~~s~~~~ra~fa~~~lwVT~y~~~E~~asg~y~~q~~~~~ 587 (662)
++++ ++|+|+|+|+ ++|++|+|+||||+|++.+.+++.++|...+||+||+|+||||||+|+|+||||+|++|+++++
T Consensus 548 ~~~~~~~R~~~i~N~-~~N~~G~pvgYkl~p~~~~~~~l~~~s~~~rra~fa~~~lwVT~y~d~E~~aag~y~~~s~~~~ 626 (731)
T 3hi7_A 548 RFKRKLPKYLLFTSP-QENPWGHKRSYRLQIHSMADQVLPPGWQEEQAITWARYPLAVTKYRESELCSSSIYHQNDPWDP 626 (731)
T ss_dssp CTTSCCCSEEEEEEE-EECTTSCEEEEEEEEECCCCCCSCTTSGGGGGGGGGGCSEEEEECCGGGSCSCCTTTTTCSSSC
T ss_pred ccCCCCceEEEEeCC-CcCCCCCceeEEEccCCccccccCCcchhhhhchhcccceEEecCCCCccCCCccccccCCCCC
Confidence 9999 9999999999 8999999999999998877777779999999999999999999999999999999998988764
Q ss_pred --ChhccccCCCceeeCCcEEEEEeceecCCCCCCCCcc--cceeeeeEEEecCCCCCCCCCCCCCCC
Q 006085 588 --TLLQWTDGNREIENTDIVLWYTMGIHHAPCQEDFPVM--PTVSCGFELRPTNFFEYNPVLKVIPPK 651 (662)
Q Consensus 588 --~l~~~~~~~e~i~~~DiV~W~t~G~~HvPr~ED~Pvm--p~~~~~f~L~P~nFFd~nP~ldvp~~~ 651 (662)
+|++|+++||+|+|||||||||||+||+||+|||||| |++++||+|||+||||+||+||+|++.
T Consensus 627 ~~gl~~w~~~~e~I~n~DiV~W~t~G~~HiPr~ED~PvMptp~e~~~f~LrP~nFFd~nPalds~~~v 694 (731)
T 3hi7_A 627 PVVFEQFLHNNENIENEDLVAWVTVGFLHIPHSEDIPNTATPGNSVGFLLRPFNFFPEDPSLASRDTV 694 (731)
T ss_dssp SCCTTHHHHTCCBCSSEEEEEEEEEEEEECCCGGGSSCBCSTTCEEEEEEEEESSSSSCGGGGCTTCE
T ss_pred CCCHHHHhhCCCceecCceEEEEecccccCCChhhcCccccccceeEEEEEccCCCCCCccccCcceE
Confidence 7999999999999999999999999999999999999 558999999999999999999999763
No 9
>3pgb_A Putative uncharacterized protein; oxidoreductase, copper amine oxidase, CAO, topaquinone, TPQ; HET: TPQ NAG BMA MAN; 2.45A {Emericella nidulans}
Probab=100.00 E-value=9.6e-152 Score=1294.58 Aligned_cols=610 Identities=21% Similarity=0.320 Sum_probs=503.0
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHhcC-C--C-------CCeEEEEEEccCCChHHhhhhhccCCCCCCcEEEEEEEeC
Q 006085 16 ISSSKRHPLDSLRPSEFTRVQTIVKTSY-P--S-------NNLSFHYVGMDEPDKAVVYSWLSNSKTKFPRRAIVIARHN 85 (662)
Q Consensus 16 ~~~~~~HPldpLt~~Ei~~a~~il~~~~-~--~-------~~~~f~~i~L~EP~K~~vl~~l~~~~~~p~R~A~vv~~~~ 85 (662)
.++-+..+|++||++|+++|+++|.++. + . .++++.+|+|+.|+|++||+|||+++++|+|+|+|+++++
T Consensus 60 ~~ap~~~vfadLs~~E~~aV~~~L~~~~~l~Lt~~~~a~~~dN~i~~iEl~~P~K~~vL~~LD~~~~~P~R~A~vvi~fG 139 (797)
T 3pgb_A 60 IKAPKENVWYGLTDDETADVAKWLFGRPELNLTTTENAGEWDNTIALIELHRPNKSEAIPYLDGSGPAPTRHAHVRLNNR 139 (797)
T ss_dssp CCCSSCCSSSCCCHHHHHHHHHHHHTCTTTCCCCTTTCCSSSEEEEEEEEECCCHHHHHHHHHC---CCCCEEEEEEEEC
T ss_pred ccCCCCCcccccCHHHHHHHHHHHhcCCCCCCcccccCCccCCeEEEEEeeCCCHHHHHHhhcCCCCCCCeeEEEEEEcC
Confidence 4555589999999999999999999874 2 1 6789999999999999999999999888999999999996
Q ss_pred Ce----EEEEEE-ECCCC--eEEEEEeec---CC-C-----cCCCCHHHHHHHHHHHhcChHHHHHHHh---cCCCCCce
Q 006085 86 HQ----THEIIV-DLSKR--SIVSDKVYT---GH-G-----FPLLTLEEQHAGAALVLAYEPFKASVKK---RGLNISDV 146 (662)
Q Consensus 86 ~~----~~e~vV-~L~~~--~v~~~~~~~---~~-~-----~p~~~~~e~~~~e~~~~~~p~~~~~~~~---~gi~~~~v 146 (662)
++ ..|++| .|+.+ +.++...++ +. + ..+++..|...+.++++.--.....+-. .|.+.+.+
T Consensus 140 ~~~~P~v~Ey~VGPLP~p~~t~~~~l~~~y~~~~~g~~~~~~r~~~~~e~~~l~~~~~~~~~~~~~l~~~t~~~~~~~~L 219 (797)
T 3pgb_A 140 ATTDPYFADILVGPLPVSNATTWEPLEFPYTRKTQGQVRNVEPDGETVYSEWLFKISASIADITLDLWNGTALGLENDTL 219 (797)
T ss_dssp SSSSCEEEEEEEESSSCSTTCEEEECCTTCSSCSTTEEECSCCCTTHHHHTTHHHHHHHTHHHHHHHHSCCCSSSTTCCE
T ss_pred CCCCCceEEEEEcCCCCCCcceeEEccccccCCCCCCCCcccCcchhhHHHHHHHHHHHHHHHHHHHhhcccccCCCCeE
Confidence 54 569999 59877 666665441 11 1 1235666777676665544333333321 22222233
Q ss_pred EE-ccccccccCCCCCeeEEEEEEEEeeCCC--CCcccCcCCCeEEEEecCC-----cEEEEEeC---------------
Q 006085 147 VC-SASTVGWYGEKKSKRVLKFPCFYTDQGT--INMFLRPIEGITIVVDIEE-----MKVTEYND--------------- 203 (662)
Q Consensus 147 ~~-d~w~~G~~~~~~~rRl~~~~~~~~~~~~--~n~Ya~Pl~g~~~~vD~~~-----~~vv~i~d--------------- 203 (662)
.+ +.-+.| +.+ ++|+. +++|+|..++ +++|+||+ ||+++||+.+ |+|.++-.
T Consensus 220 ~~~~~~P~g-~~s-g~r~~--W~~~~~~~~g~~d~~~lhP~-gl~~lvDh~~~Dps~W~v~~v~Yng~~y~s~eel~~~y 294 (797)
T 3pgb_A 220 DIWGIDPLW-QDD-GRIIR--WDMFWNMADDEFDSETLLPL-GLYLKSDVTGRDPSQWKLLGWMYNDIFYETTEEFRKAY 294 (797)
T ss_dssp EEEECSSCB-CST-TCCEE--EEEEEECCCTTCCCGGGCEE-EEEEEEECCSSCGGGCEEEEEEETTEEESSHHHHHHHH
T ss_pred eeeccCCCC-cCC-CCEEE--eeeeeccCCCccccceeecc-ceEEEEecCCCChhHcEEEEEEECCEecCCHHHHHHHH
Confidence 32 111234 222 33444 4677773323 56999999 8999999996 78877742
Q ss_pred --CccccCCCCCCCCCCcCCCCC--CCCCCCCCceeec-cCCeEEEe--ceEEEeeceEEEEEecCCcceEEEeeEEecC
Q 006085 204 --REVAPIPKPEPTEYRLSKLKP--PFGPRLNSVATSS-TRPGFKIN--GNTVKWANWVFNVGFDARVGTIISTASIYDI 276 (662)
Q Consensus 204 --~~~~~~p~~~~~~y~~~~~~~--~~r~~~kP~~i~q-eG~sf~v~--g~~V~W~~W~f~vgf~~reGl~L~dv~~~d~ 276 (662)
+....+++..+..|....+++ +.|+++||++|+| ||+||+|+ ||+|+||||+||||||+||||+||||+|+|
T Consensus 295 ~~g~~~~~~~~~~g~ws~~~~~g~~~~~~~lkP~~i~QPeGpsF~V~g~g~~V~W~~W~F~vgfn~ReGlvL~dV~y~g- 373 (797)
T 3pgb_A 295 WSPGFVKLKPNVDGAWAHTEQRGPVPPQDRKQPPVMIAPDGARYSVDAERKYVTWMDFSFYIAFNRDTGLSLFDIKYKG- 373 (797)
T ss_dssp TSTTCCCCCCCCCCGGGCCSCCSCCCTTTTSCCCCCCCTTCCCSEEETTTTEEEETTEEEEEEEETTTEEEEEEEEETT-
T ss_pred hCCCeeecCCCCCCcccccccCCCCCCcCCCCCceeeCCCCCCEEEecCCCEEEeCCcEEEEecCCCCceEEEccccCC-
Confidence 222222222223454222222 3478999999999 99999997 799999999999999999999999999998
Q ss_pred CCCeEeEEEEeeeceeEEeecCCCCCcccceeeeecCCCCcccCCcCCCCCCCCCCccEEeeeEeecCCCceeEeCceEE
Q 006085 277 NMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTPNAVC 356 (662)
Q Consensus 277 ~~~~~r~I~yrlsl~Em~vpYgdp~~~~~~k~~~D~geyG~G~~a~~L~~G~DCpg~~~YlD~~~~~~~g~p~~~~naiC 356 (662)
||||||+|||||+||||||+|.+.+++|||. |||+|.+||+|++||||||+|+|||+++.++ |+|++++||||
T Consensus 374 -----r~V~YrlSlsEm~VPYg~~~P~~~~~af~D~-eyG~G~~an~L~lGcDCpg~i~YlD~~~~~~-~~p~~~~NaIC 446 (797)
T 3pgb_A 374 -----QRVLYELGLQEALAHYAANDPVQSSVAYLDS-YYGFGPYAFELLKGYDCPSYASYLNTSFYKD-EETHTHVDSLC 446 (797)
T ss_dssp -----EEEEEEEEEEEEEEEECCSSHHHHHCEEEGG-GTCSGGGCCCCCBTTTBCTTCEEEEEEEEET-TEEEEEEEEEE
T ss_pred -----eeEEEEeEeeeeEEeCCCCChhhhcceeeec-ccCCccccccCccCCCCCCCCEEeeeEEecC-CCceEeccEEE
Confidence 9999999999999999999877766667775 9999999999999999999999999999987 67899999999
Q ss_pred EEEeeCCCceecccccCCCCceeecccceEEEEEEEEEecccceEEEEEEecCccEEEEEEEeEEEeeecccccccCccc
Q 006085 357 IFERHAGDVMWRHTEAEMPGHVREVRPEVSLVVRMVATVGNYDYIIDWEFKPSGSIKMGVGLSGVLEVKPVEYTYVDQIK 436 (662)
Q Consensus 357 i~E~d~~g~l~kH~~~~~~~~~~~~r~~~~LVvr~i~TVgNYdYi~~w~F~~DGtIe~~v~aTGil~t~~~~~~~~~~~~ 436 (662)
|||+|+|.|||||++.+ .+.+|++++||||+|+|||||||||+|+|||||+||+||||||||++.. +. +
T Consensus 447 ihE~D~G~~lwKHt~~~----~~~v~r~r~LVvr~I~TVgNYDYif~w~F~qdGsIe~eVraTGiLst~~--~~--~--- 515 (797)
T 3pgb_A 447 LFEFDADYPMARHSTSE----FVSVTKNVYFTLRSVSTIGNADYMFSYNFHMDGTIGVEVRASGYIQSAY--YA--N--- 515 (797)
T ss_dssp EEEEECSSCSEEEECSS----EEEEECCEEEEEEEEEEETTEEEEEEEEECTTSCEEEEEEEEECCCCEE--CT--T---
T ss_pred EEEeeCCceeEEeccCC----cceEEeccEEEEEEEeeeccccEEEEEEEecCCeEEEEEEEEEEEEecc--cC--C---
Confidence 99999776899999953 2345566699999999999999999999999999999999999999752 21 1
Q ss_pred cCCccceecCCccccccceEEEeeeecCCCCCCCceEEEEEEEecCCCCCC--CcceeEEEEEEEeechhhhhhcCCC-C
Q 006085 437 EDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTNVNT--PRKSYWTVEKETAKTEFEARLNLDT-K 513 (662)
Q Consensus 437 ~~~yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~~~n--p~~~~~~~~~~~l~tE~ea~~~~~~-~ 513 (662)
+.+|||+|+|+++|++|||+|||||||||||.+|||+++|+++++.+.+++ +++++|++++++++||+||+++++. +
T Consensus 516 ~~~yGt~V~p~v~a~~HqH~f~~RlD~dIDG~~Nsv~~~d~~~~~~~~p~~p~~~~n~~~~~~t~l~tE~eA~~~~~~~~ 595 (797)
T 3pgb_A 516 NQDFGYQIHDSLSGSMHDHVLNFKADFDILGPNNTIELVSVVPVTKQFSWSGNKTRNTMQLGRSFIHSEDEARLNWGFNG 595 (797)
T ss_dssp CGGGCCEEETTEECCCEEEEEEEEEEECTTSSEEEEEEEEEEEEEEECTTTTTCEEEEEEEEEEECCBGGGCEECCCGGG
T ss_pred CCCccceecCCccccccceEEEEeeccCCCCCCCeEEEEeeEEccCCCCCCCCcccceeEEEEEEccchhhhhhhcCCCC
Confidence 467999999999999999999999999999999999999999998765544 5689999999999999999999999 9
Q ss_pred CcEEEEeCCCCCCCCCCceeEEEccCCcccCCCCCCC-hhccccccceeeeEEeecCCCCCCCCCcCcCCCCCCCC--hh
Q 006085 514 PMEFALVNPSKKTKIGHPVGYRLLPGSIIGPMLMEDD-YPQIRAGFTNYNVWVTPYKKSEKYSGGNYVDQSHGDDT--LL 590 (662)
Q Consensus 514 ~r~~~ivN~~~~N~~G~p~gYrl~p~~~~~~~~~~~s-~~~~ra~fa~~~lwVT~y~~~E~~asg~y~~q~~~~~~--l~ 590 (662)
+|+|+|+|++++|++|+|+||||+|++++.+++.++| ...|||+||+|+||||||+|+|+||||+|++|++++++ +.
T Consensus 596 ~r~~~ivN~~~~N~~G~pvgYkL~p~~~~~~L~~~~s~~~~rra~fa~~~lwVT~y~d~E~~aaG~y~~qs~~~~~v~~~ 675 (797)
T 3pgb_A 596 QTQLHVVNQDKPNKFGEPRGYRILPSAGTAHLTVLNSSNLVHAAHWAEYDVQVTRQHDFEPTSAHPYNSQDIHNPPVDFS 675 (797)
T ss_dssp CEEEEEEEEEEECTTSCEEEEEEECSSCCCCCCCSSCTTTTTTTGGGGCSEEEEECCTTCCCSCCTTGGGCTTSCSCCGG
T ss_pred CceEEEeCCCCcCCCCCeeeEEEccCCCCccccCCCchhhhhhchhhhCceEEecCCCCccCCCCCCcccCCCCCccchh
Confidence 9999999999999999999999999877766664444 68889999999999999999999999999999998753 56
Q ss_pred ccccCCCceeeCCcEEEEEeceecCCCCCCCCc--ccceeeeeEEEecCCCCCCCCCCCCCC
Q 006085 591 QWTDGNREIENTDIVLWYTMGIHHAPCQEDFPV--MPTVSCGFELRPTNFFEYNPVLKVIPP 650 (662)
Q Consensus 591 ~~~~~~e~i~~~DiV~W~t~G~~HvPr~ED~Pv--mp~~~~~f~L~P~nFFd~nP~ldvp~~ 650 (662)
+|+ +||+|+|||||||||||+||+||+||||| ||++++||+|||+||||+||+||+|++
T Consensus 676 ~~~-~nesI~neDiVlW~t~G~~HiPr~ED~Pvt~MP~e~~gf~LrP~nFFd~NPald~~~~ 736 (797)
T 3pgb_A 676 TFF-NGESLNQTDLVVWLNLGMHHVPHTGDLPNTVFTTAHSGVAFTPLNYLPGDPSRETVNM 736 (797)
T ss_dssp GGC-SCCBCSSEEEEEEEEEEEEECCCGGGSSCBCTTTSEEEEEEEEESCSSSCGGGGCSCE
T ss_pred hhc-CCCccccCceEEEEecccccCCChhhCCCccCCcceeEEEEEcCCCCCCCccccCccc
Confidence 788 99999999999999999999999999999 999999999999999999999999975
No 10
>2cs7_A Pneumococcal histidine triad A protein; PHTA, pneumococcal histidine triad protein, structural genomics, unknown function; 1.20A {Streptococcus pneumoniae} SCOP: d.9.2.1
Probab=24.78 E-value=26 Score=27.48 Aligned_cols=26 Identities=19% Similarity=0.323 Sum_probs=20.0
Q ss_pred cccCCC-CCCCCCCCHHHHHHHHHHHH
Q 006085 15 PISSSK-RHPLDSLRPSEFTRVQTIVK 40 (662)
Q Consensus 15 ~~~~~~-~HPldpLt~~Ei~~a~~il~ 40 (662)
||--.. .=|-.+||+.|+++|.++|.
T Consensus 28 ~HGdH~HyIpk~~Ls~~el~~A~~yl~ 54 (55)
T 2cs7_A 28 PHGDHYHYIPKNELSASELAAAEAFLS 54 (55)
T ss_dssp EETTEEEEEEGGGSCHHHHHHHHHHHH
T ss_pred ecCCeEEEeEhHHCCHHHHHHHHHHhc
Confidence 444333 34889999999999999985
Done!