BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006087
(662 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A5ERG8|TILS_BRASB tRNA(Ile)-lysidine synthase OS=Bradyrhizobium sp. (strain BTAi1 /
ATCC BAA-1182) GN=tilS PE=3 SV=1
Length = 358
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 85 IALGVSGGPDSMALCVLTAGWKT---GGFNQNGEAGEFIDGLLAITVDHGLREESKEEAN 141
+ L VSGGPDSMAL L A W+ GG LLA+TVDHGLR ES+ EA
Sbjct: 30 LTLAVSGGPDSMALMWLAARWRATRAGGPR-----------LLAVTVDHGLRPESRREAL 78
Query: 142 IVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHA 201
+V +G+ +R W +P G + EAAR RYRL + Q ++ AH
Sbjct: 79 MVKQLARQLGLTHRTLR--WSGEKPAAG-IPEAARIARYRLLARAAEQAGASHVVTAHTR 135
Query: 202 DDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLICQGGNRDWVED 261
DDQAE ++RL R SG+ GLA MA S+ L +L + + +D
Sbjct: 136 DDQAETVLMRLLRGSGIAGLAAMAPVSRRDGLLLARPLLSLSKARLLATLRSAGIAFADD 195
Query: 262 PTNRSPLFVRNRIRMSLGDLSS 283
PTNR P F R R+R + L++
Sbjct: 196 PTNRDPAFTRPRLRALMPTLAA 217
>sp|A8GY99|TILS_RICB8 tRNA(Ile)-lysidine synthase OS=Rickettsia bellii (strain OSU
85-389) GN=tilS PE=3 SV=1
Length = 430
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 165/373 (44%), Gaps = 48/373 (12%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
+IA+ VSGG DS+AL L W N E L ++VDH LR++SK+E +
Sbjct: 21 KIAIAVSGGSDSVALLYLANIWAKKN---NIE-------LFVLSVDHNLRDQSKQEIEYI 70
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADD 203
+ +D+G++ + + D + +LQE AR RY L +C + I VLL AHH DD
Sbjct: 71 QNTANDLGLKFYSL---FFDHQNNFSNLQERARKGRYDLMTSLCQKLDILVLLTAHHEDD 127
Query: 204 QAELFILRLSRNSGVLGLAGMAF----SSQIFSSYAYSCHDDLKNHSILLICQGGNRDWV 259
E F LRL R SGV GL+ + ++QI +L N+ N W
Sbjct: 128 YIENFCLRLERKSGVFGLSSSSVNWHNNTQIIRPLFNIPKSELVNY-----LATNNIKWF 182
Query: 260 EDPTNRSPLFVRNRIRMSLGDLSSCSFKSEL---QAVISACRRTRSYVEHVCSNLINEAV 316
ED +N S + RN IR L K ++ Q ++ + E + + I E+V
Sbjct: 183 EDQSNLSTKYRRNTIRQKLAK-EEVYIKDDIITQQIKVNELIENKFKPELISA--IAESV 239
Query: 317 TVMDQGYAVIDLEILNPSKIEDIFLSKFLALVLQFICQRQRPVRGSTSKLLLHYIR-TFP 375
+ + G+A +DL + S + + +L I +QR R + + +L IR +
Sbjct: 240 KISEYGFAFLDL--IKFSGFSQEVRVQLINFLLIIISGQQRSARFYSVEPILKLIRQSLD 297
Query: 376 CKTSLTAAGCYLCPTPGSRGTKALVCSSIDGPLP-SKLEL---------FQIHSDGEQRH 425
K +L GC + K L+ LP SKL L F+I + + +
Sbjct: 298 FKNTL--HGCVIKRMQN----KLLIYREFGKKLPESKLLLDKQLVWDNRFRITKNHDIEN 351
Query: 426 CVTDVEQILEDAK 438
CV LED K
Sbjct: 352 CVATYLS-LEDYK 363
>sp|Q1RGN9|TILS_RICBR tRNA(Ile)-lysidine synthase OS=Rickettsia bellii (strain RML369-C)
GN=tilS PE=3 SV=1
Length = 430
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 164/373 (43%), Gaps = 48/373 (12%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
+IA+ VSGG DS+AL L W N E L ++VDH LR++SK+E +
Sbjct: 21 KIAIAVSGGSDSVALLYLANIWAKKN---NIE-------LFVLSVDHNLRDQSKQEIEYI 70
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADD 203
+ +D+G++ + + D + +LQE AR RY L +C + I VLL AHH DD
Sbjct: 71 QNTANDLGLKFYSL---FFDHQNNFSNLQERARKGRYDLMTSLCQKLDILVLLTAHHEDD 127
Query: 204 QAELFILRLSRNSGVLGLAGMAF----SSQIFSSYAYSCHDDLKNHSILLICQGGNRDWV 259
E F LRL R SGV GL+ + ++QI +L N+ N W
Sbjct: 128 YIENFCLRLERKSGVFGLSSSSVNWHNNTQIIRPLFNIPKSELVNY-----LATNNIKWF 182
Query: 260 EDPTNRSPLFVRNRIRMSLGDLSSCSFKSEL---QAVISACRRTRSYVEHVCSNLINEAV 316
ED +N S + RN IR L K ++ Q ++ + E + + I E+V
Sbjct: 183 EDQSNLSTKYRRNTIRQKLAK-EEVYIKDDIITQQIKVNELIENKFKPELISA--IAESV 239
Query: 317 TVMDQGYAVIDLEILNPSKIEDIFLSKFLALVLQFICQRQRPVRGSTSKLLLHYIR-TFP 375
+ + G+A +DL + S + + +L I +QR R + + +L IR +
Sbjct: 240 KISEYGFAFLDL--IKFSGFSQEVRVQLINFLLIIISGQQRSARFYSVEPILKLIRQSLD 297
Query: 376 CKTSLTAAGCYLCPTPGSRGTKALVCSSIDGPLP-SKLEL---------FQIHSDGEQRH 425
K +L GC + K L+ LP SKL L F+I + +
Sbjct: 298 FKNTL--HGCVIKRMQN----KLLIYREFGKKLPESKLLLDKQLVWDNRFRITKNHNIEN 351
Query: 426 CVTDVEQILEDAK 438
CV LED K
Sbjct: 352 CVATYLS-LEDYK 363
>sp|B3CLY6|TILS_WOLPP tRNA(Ile)-lysidine synthase OS=Wolbachia pipientis subsp. Culex
pipiens (strain wPip) GN=tilS PE=3 SV=1
Length = 430
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 141/305 (46%), Gaps = 14/305 (4%)
Query: 82 HHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEAN 141
H++IA+ VSGG DS+ L L W + +A+TV+HGLR ES++EA+
Sbjct: 17 HNQIAVAVSGGVDSIVLLHLMTNWAKKNK---------LSLPIALTVNHGLRSESQKEAD 67
Query: 142 IVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHA 201
+ ++G + + +W + + +G++Q AR RY+L + C + + LL+AHH
Sbjct: 68 FIISYAKELGAKESFI-LNW-EKQNIKGNIQLQARKARYKLLAEWCKNNNVKCLLVAHHK 125
Query: 202 DDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLICQGGNRDWVED 261
DDQAE F+LRL R SGV GL+ M + S + Y + + I + W+ED
Sbjct: 126 DDQAETFLLRLERGSGVDGLSSMDYKSFLNGIYIFRPLLNFSRSEIERYAKLHQLRWIED 185
Query: 262 PTNRSPLFVRNRIRMSLGDLSSCSFKSELQAVISA-CRRTRSYVEHVCSNLINEAVTVMD 320
+N + R R L + +E + + +R + H ++ V V D
Sbjct: 186 RSNYDLKYRRTLYRNLLKASDNQDVLTERICLTALHMKRAAKALMHYTRLAFDDCVNVHD 245
Query: 321 QGYAVIDLEILNPSKIEDIFLSKFLALVLQFICQRQRPVRGSTSKLLLHYIRTFPCKTSL 380
GY I L E+I L L ++ + +P R ++ ++ + I +
Sbjct: 246 FGYIEIKLSEFYQLP-EEIALRLLLYSIMAIASKHYKP-RYNSLIVIFNKILQKGSNVNC 303
Query: 381 TAAGC 385
T +GC
Sbjct: 304 TLSGC 308
>sp|A5CFP2|TILS_ORITB tRNA(Ile)-lysidine synthase OS=Orientia tsutsugamushi (strain
Boryong) GN=tilS PE=3 SV=1
Length = 441
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 151/317 (47%), Gaps = 39/317 (12%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDG-LLAITVDHGLREESKEEANI 142
++A+ VSGG DS+AL +L W E + G + +T+DH LR ES EA+
Sbjct: 22 KLAIAVSGGTDSLALMLLVKHW-----------NEKVKGEITVLTIDHHLRSESTSEADY 70
Query: 143 VSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHAD 202
VS + I+ + V W+ + G++Q AR RY L C +H I L+ HHAD
Sbjct: 71 VSSICQN--IKLQHVTLHWIH-KGITGNIQAQARKARYHLLTNYCQEHDILHLITGHHAD 127
Query: 203 DQAELFILRLSRNSGVLGLAG----MAFSSQIFSSYAYSCHDDLKNHSILLICQGGNRDW 258
D E F +RL R +G+ GL+ + +I DLK + + N W
Sbjct: 128 DIVENFFIRLLRGAGLAGLSSHNIFFVNNVRIIRPLFNITKQDLKKY-----LEQQNIKW 182
Query: 259 VEDPTNRSPLFVRNRIRMSLGDL---SSCSFKSEL---QAVISACRRTRSYVEHVCSNLI 312
+ DP+N S ++R ++R L + +F EL + ++S TR+ ++ V + +I
Sbjct: 183 INDPSNNSNKYLRTQVRDLLKSMLISFQNNFTVELLKKRIMLSQMHLTRA-LDSVNNEII 241
Query: 313 N---EAVTVMDQGYAVIDLEILNPSKIEDIFLSKFLALVLQFICQRQRPVRGST-SKLLL 368
+ AV + G+AVID ++ + E + L+ +L + +P R S+ ++L
Sbjct: 242 HYVVYAVKIYSAGFAVIDRKLFRQASPEARY--AILSYLLMIVGANTKPQRFSSLQHIIL 299
Query: 369 HYIRTFPCKTSLTAAGC 385
H I+ + T T GC
Sbjct: 300 HDIQEY--NTYKTLHGC 314
>sp|C0R4S1|TILS_WOLWR tRNA(Ile)-lysidine synthase OS=Wolbachia sp. subsp. Drosophila
simulans (strain wRi) GN=tilS PE=3 SV=1
Length = 431
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 140/305 (45%), Gaps = 14/305 (4%)
Query: 82 HHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEAN 141
++++A+ VSGG DS+ L L W + A+TV+HGLR ES++EA+
Sbjct: 18 NNQVAVAVSGGVDSIVLLHLMTNWAKKNK---------LSLPTALTVNHGLRPESQKEAD 68
Query: 142 IVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHA 201
V ++G + + +W + + +G++Q AR RY+L + C + + LL+AHH
Sbjct: 69 FVVSYAKELGAKESFI-LNW-EKQNIKGNIQLQARKARYKLLAEWCKNNNVKYLLVAHHK 126
Query: 202 DDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLICQGGNRDWVED 261
DDQAE F+LRL R SGV GL+ M + S + Y + + I + W+ED
Sbjct: 127 DDQAETFLLRLERGSGVDGLSSMDYKSFLNGIYIFRPLLNFSRSEIEKYAKLHRLKWIED 186
Query: 262 PTNRSPLFVRNRIRMSLGDLSSCSFKSELQAVISA-CRRTRSYVEHVCSNLINEAVTVMD 320
+N + R R L + +E + + +R + H N+ V V D
Sbjct: 187 RSNYDLKYRRTLYRNLLKASDNQEILTERICLTALHMKRAAKALMHYTRLAFNDCVNVHD 246
Query: 321 QGYAVIDLEILNPSKIEDIFLSKFLALVLQFICQRQRPVRGSTSKLLLHYIRTFPCKTSL 380
GY I L E+I L L ++ + +P R ++ ++ + I +
Sbjct: 247 LGYIEIKLSEFYQLP-EEIALRLLLYSIMAIASKHYKP-RYNSLIVIFNKILQKDSNVNC 304
Query: 381 TAAGC 385
T +GC
Sbjct: 305 TLSGC 309
>sp|B3CUJ5|TILS_ORITI tRNA(Ile)-lysidine synthase OS=Orientia tsutsugamushi (strain
Ikeda) GN=tilS PE=3 SV=1
Length = 441
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 152/317 (47%), Gaps = 39/317 (12%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAI-TVDHGLREESKEEANI 142
++A+ VSGG DS+AL +L W E + G + I T+DH LR ES EA+
Sbjct: 22 KLAIAVSGGSDSLALMLLVKHW-----------NEKVKGEITILTIDHHLRSESTSEADY 70
Query: 143 VSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHAD 202
VS + I+ + V W+ + G++Q AR RY+L C +H I L+ HHAD
Sbjct: 71 VSSICQN--IKLQHVTLHWIH-KGITGNIQAQARKARYQLLTNYCQEHDILHLITGHHAD 127
Query: 203 DQAELFILRLSRNSGVLGLAG----MAFSSQIFSSYAYSCHDDLKNHSILLICQGGNRDW 258
D E F +RL R +G+ GL+ + +I DLK + + N W
Sbjct: 128 DIVENFFIRLLRGAGLAGLSSHNLFFVNNVRIIRPLFNITKQDLKKY-----LEQQNIKW 182
Query: 259 VEDPTNRSPLFVRNRIRMSLGDL---SSCSFKSEL---QAVISACRRTRSYVEHVCSNLI 312
+ DP+N S ++R ++R L + +F EL + ++S T++ +E V + +I
Sbjct: 183 INDPSNSSNKYLRTQVRDLLKSMLISFQHNFTVELLKKRIMLSQMHLTQA-LESVNNEII 241
Query: 313 NEAVTVMD---QGYAVIDLEILNPSKIEDIFLSKFLALVLQFICQRQRPVRGST-SKLLL 368
+ V V+ G+AVID ++ + E + L+ +L + +P R S+ ++ L
Sbjct: 242 HYVVHVVKIYSAGFAVIDRKLFKKASPEARY--AILSYLLMIVGANTKPPRFSSLQRISL 299
Query: 369 HYIRTFPCKTSLTAAGC 385
H I+ + T T GC
Sbjct: 300 HDIQEY--NTYKTLHGC 314
>sp|Q73FR9|TILS_WOLPM tRNA(Ile)-lysidine synthase OS=Wolbachia pipientis wMel GN=tilS
PE=3 SV=1
Length = 431
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 142/310 (45%), Gaps = 24/310 (7%)
Query: 82 HHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEAN 141
++++A+ VSGG DS+ L L W + +A+TV+HGLR ES++EA+
Sbjct: 18 NNQVAVAVSGGVDSIVLLHLMTNWAKKNK---------LSLPIALTVNHGLRPESQKEAD 68
Query: 142 IVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHA 201
V ++G + + +W + + +G++Q AR RY+L + C + + LL+AHH
Sbjct: 69 FVVSYAKELGAKESFI-LNW-EKQNIKGNIQLQARKARYKLLAEWCKNNNVKYLLVAHHK 126
Query: 202 DDQAELFILRLSRNSGVLGLAGMAFSS-----QIFSSYAYSCHDDLKNHSILLICQGGNR 256
DDQAE F+LRL R SGV GL+ M + S IF +++ ++ L
Sbjct: 127 DDQAETFLLRLERGSGVDGLSSMDYKSFLNGIDIFRPLLNFSRSEIEKYAKL-----HRL 181
Query: 257 DWVEDPTNRSPLFVRNRIRMSLGDLSSCSFKSELQAVISA-CRRTRSYVEHVCSNLINEA 315
W+ED +N + R R L + +E + + +R + H N+
Sbjct: 182 KWIEDRSNHDLKYRRTLYRNLLKASDNQEILTERICLTALHMKRAAKALMHYTRLAFNDC 241
Query: 316 VTVMDQGYAVIDLEILNPSKIEDIFLSKFLALVLQFICQRQRPVRGSTSKLLLHYIRTFP 375
V V D GY I L E+I L L ++ + +P R S+ + + I
Sbjct: 242 VNVHDLGYIEIKLSEFYQLP-EEIALRLLLYSIMAIASKHYKP-RYSSLIAIFNRILQKD 299
Query: 376 CKTSLTAAGC 385
+ T +GC
Sbjct: 300 SNVNCTLSGC 309
>sp|A8GLX9|TILS_RICAH tRNA(Ile)-lysidine synthase OS=Rickettsia akari (strain Hartford)
GN=tilS PE=3 SV=1
Length = 430
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 118/252 (46%), Gaps = 28/252 (11%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
+IA+ VSGG DS+AL L W N E L I+VDH LRE+SK+E V
Sbjct: 21 KIAVAVSGGSDSVALLYLANIWAEKN---NIE-------LSVISVDHNLREQSKQETYYV 70
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADD 203
+ + + + + D + +LQE AR RY L +C++ I VLL AHH DD
Sbjct: 71 QNISNSLNRKHYSLS---FDHQNNFSNLQERARAGRYDLMTNLCLEFDILVLLTAHHEDD 127
Query: 204 QAELFILRLSRNSGVLGLAGMAF----SSQIFSSYAYSCHDDLKNHSILLICQGGNRDWV 259
E F LRL RNSG+ GL+ + QI +L + + N W
Sbjct: 128 YVENFCLRLERNSGIFGLSSSNINWYNNIQIIRPLYNIPKSELVEYLV-----SHNIKWF 182
Query: 260 EDPTNRSPLFVRNRIRMSLGDLSSCSFKSEL---QAVISACRRTRSYVEHVCSNLINEAV 316
ED +N S + RN IR L + K+E+ Q I+ + E + + I EAV
Sbjct: 183 EDESNSSDKYRRNIIRQKLAK-GAGYIKAEIILQQLKINDLLDNKFKPELISA--IAEAV 239
Query: 317 TVMDQGYAVIDL 328
+ + G+A +DL
Sbjct: 240 KIFEYGFAFLDL 251
>sp|Q4UN67|TILS_RICFE tRNA(Ile)-lysidine synthase OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=tilS PE=3 SV=1
Length = 430
Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 116/267 (43%), Gaps = 58/267 (21%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
+IA VSGG DS+AL L W N E L I+VDH LRE+SK+E + +
Sbjct: 21 KIAAAVSGGSDSVALLYLANIWAEKN---NIE-------LSVISVDHNLREQSKQETHYI 70
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADD 203
+ + + + + D + +LQE AR+ RY L +C++ I VLL AHH DD
Sbjct: 71 QNISNSLNRKHYSLS---FDHQNNFSNLQERAREGRYDLMTNLCLELDILVLLTAHHEDD 127
Query: 204 QAELFILRLSRNSGVLGLAGMAFSS----QIFSSYAYSCHDDLKNHSILLICQGGNRDWV 259
E F LRL RNSG+ GL+ + QI +L + + N W
Sbjct: 128 YVENFCLRLERNSGIFGLSSSNINWYNNIQIIRPLYNIPKSELVEYLV-----SHNIKWF 182
Query: 260 EDPTNRSPLFVRNRIR------------------MSLGDLSSCSFKSELQAVISACRRTR 301
ED +N S + RN IR + + DL FK EL + I+
Sbjct: 183 EDESNSSDKYRRNIIRQKLAKGEDYIKADIILQQLKINDLLDNKFKPELISAIA------ 236
Query: 302 SYVEHVCSNLINEAVTVMDQGYAVIDL 328
EAV + + G+A +DL
Sbjct: 237 ------------EAVKIFEYGFAFLDL 251
>sp|Q9ZEA3|TILS_RICPR tRNA(Ile)-lysidine synthase OS=Rickettsia prowazekii (strain Madrid
E) GN=tilS PE=3 SV=1
Length = 430
Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 130/284 (45%), Gaps = 50/284 (17%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
+IA+ VSGG DS++L L W N E L I+VDH LR +SK+E +
Sbjct: 21 KIAIAVSGGSDSISLLYLANIWARKN---NIE-------LFVISVDHNLRPQSKQENYYI 70
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADD 203
S++ + + D + +LQE AR+ RY L +C++ + VLL AHH DD
Sbjct: 71 HTISSNLNRKYYNLS---FDHQNNFSNLQERAREGRYDLMTNLCLELDVLVLLTAHHEDD 127
Query: 204 QAELFILRLSRNSGVLGLA--------GMAFSSQIFSSYAYSCHDDLKNHSILLICQGGN 255
E F LRL RNSG+ GL+ + +++ + L NH I
Sbjct: 128 YVENFCLRLERNSGIFGLSSSNIHWYNNIQIIRPLYNIPKSELVEYLVNHKI-------- 179
Query: 256 RDWVEDPTNRSPLFVRNRIRMSLGDLSSCSFKSE--LQAVISACR-RTRSYVEH----VC 308
W ED +N S + RN IR L FK E ++A IS + +T +E
Sbjct: 180 -KWFEDESNLSDKYRRNIIRQKL-------FKEENYIKAEISLQQLKTNKLIEDELKPAL 231
Query: 309 SNLINEAVTVMDQGYAVIDLEILNPSKIEDIFLSKFLALVLQFI 352
+ I EAV + + G+ +DL D FL++ A ++ F+
Sbjct: 232 ISAIAEAVKIFEYGFTFLDLVKF------DKFLNEVKAQIINFL 269
>sp|Q5GTD2|TILS_WOLTR tRNA(Ile)-lysidine synthase OS=Wolbachia sp. subsp. Brugia malayi
(strain TRS) GN=tilS PE=3 SV=1
Length = 431
Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 112/248 (45%), Gaps = 12/248 (4%)
Query: 82 HHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEAN 141
++++A+ VSGG DS+ L L W E + +A+ V+HGLR ES+EE
Sbjct: 18 NNKVAVAVSGGIDSIVLLHLITSW--------AEKRQ-CPPPIALAVNHGLRPESQEEVE 68
Query: 142 IVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHA 201
V ++G++ + +W K G++Q AR RY L + C + + L IAHH
Sbjct: 69 FVVSYAKELGVKKSFI-LNWKRQNIK-GNVQSQARKARYELLTEWCKNNDVKHLFIAHHK 126
Query: 202 DDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLICQGGNRDWVED 261
DDQAE F+LRL R SG+ GL+ M + S + I WVED
Sbjct: 127 DDQAETFLLRLERGSGLDGLSSMDYKSSLNGVCMLRPLLSFSRSRIKKYADFYRLKWVED 186
Query: 262 PTNRSPLFVRNRIRMSLGDLSSCSFKSELQAVISA-CRRTRSYVEHVCSNLINEAVTVMD 320
+N+S + R R L + +E + + +R + H N+ V V D
Sbjct: 187 RSNQSLKYKRTLYRNLLKASGNQEILTERICLTTLHIKRATKALMHYTRLAFNDCVNVHD 246
Query: 321 QGYAVIDL 328
GY I L
Sbjct: 247 LGYIEIKL 254
>sp|Q5P9R1|TILS_ANAMM tRNA(Ile)-lysidine synthase OS=Anaplasma marginale (strain St.
Maries) GN=tilS PE=3 SV=2
Length = 466
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 89/191 (46%), Gaps = 14/191 (7%)
Query: 86 ALGVSGGPDSMALCVLTAGW-KTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIVS 144
A+ VSGG DS+ L L A KT ++ + +T +HG R E+ E V
Sbjct: 38 AVAVSGGVDSITLLNLVAALHKTQATSRP----------VVLTGNHGFRAEADHETRFVQ 87
Query: 145 HRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADDQ 204
R +G+ CEI+R W R QE AR++RY L + C +H + LL AH+ DQ
Sbjct: 88 KRAVALGLDCEILR--WNRHRTSSKS-QETAREIRYSLLHQWCTEHSVKFLLTAHNKSDQ 144
Query: 205 AELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLICQGGNRDWVEDPTN 264
AE ++ L R SG+ GL+GM S Y IL WVEDP+N
Sbjct: 145 AETVLMHLERGSGIDGLSGMHERSVFGDITIYRPLLGFTRQEILEYATQKQLSWVEDPSN 204
Query: 265 RSPLFVRNRIR 275
+ P + R R
Sbjct: 205 QDPKYRRTFFR 215
>sp|A8GQJ7|TILS_RICRS tRNA(Ile)-lysidine synthase OS=Rickettsia rickettsii (strain Sheila
Smith) GN=tilS PE=3 SV=1
Length = 478
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 100/201 (49%), Gaps = 24/201 (11%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
+I++ VSGG DS+AL L W N E L I+VDH LRE+SK+E + +
Sbjct: 21 KISIAVSGGSDSVALLYLANIWAEKN---NIE-------LFVISVDHNLREQSKQETHYI 70
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADD 203
+ + + + + D + +LQE AR+ RY L +C++ I VLL AHH DD
Sbjct: 71 QNISNSLNRKHYSLS---FDHQNNFSNLQERAREGRYDLMTNLCLELDILVLLTAHHEDD 127
Query: 204 QAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCH-----DDLKNHSILLICQGGNRDW 258
E F LRL RNSG+ GL+ SS I ++ + H ++ ++ N W
Sbjct: 128 YVENFCLRLERNSGIFGLS----SSNI--NWYNNIHIIRPLYNIPKSELVEYLVSHNIKW 181
Query: 259 VEDPTNRSPLFVRNRIRMSLG 279
ED +N S + RN IR L
Sbjct: 182 FEDESNSSDKYRRNVIRQKLA 202
>sp|B0BVY4|TILS_RICRO tRNA(Ile)-lysidine synthase OS=Rickettsia rickettsii (strain Iowa)
GN=tilS PE=3 SV=1
Length = 478
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 100/201 (49%), Gaps = 24/201 (11%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
+I++ VSGG DS+AL L W N E L I+VDH LRE+SK+E + +
Sbjct: 21 KISIAVSGGSDSVALLYLANIWAEKN---NIE-------LFVISVDHNLREQSKQETHYI 70
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADD 203
+ + + + + D + +LQE AR+ RY L +C++ I VLL AHH DD
Sbjct: 71 QNISNSLNRKHYSLS---FDHQNNFSNLQERAREGRYDLMTNLCLELDILVLLTAHHEDD 127
Query: 204 QAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCH-----DDLKNHSILLICQGGNRDW 258
E F LRL RNSG+ GL+ SS I ++ + H ++ ++ N W
Sbjct: 128 YVENFCLRLERNSGIFGLS----SSNI--NWYNNIHIIRPLYNIPKSELVEYLVSHNIKW 181
Query: 259 VEDPTNRSPLFVRNRIRMSLG 279
ED +N S + RN IR L
Sbjct: 182 FEDESNSSDKYRRNVIRQKLA 202
>sp|C4K162|TILS_RICPU tRNA(Ile)-lysidine synthase OS=Rickettsia peacockii (strain Rustic)
GN=tilS PE=3 SV=1
Length = 533
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 100/201 (49%), Gaps = 24/201 (11%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
++++ VSGG DS+AL L W N E L I+VDH LRE+SK+E + +
Sbjct: 21 KMSIAVSGGSDSVALLYLANIWAEKN---NIE-------LFVISVDHNLREQSKQETHYI 70
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADD 203
+ + + + + D + +LQE AR+ RY L +C++ I VLL AHH DD
Sbjct: 71 QNISNSLNRKHYSLS---FDHQNNFSNLQERAREGRYDLMTNLCLELDILVLLTAHHEDD 127
Query: 204 QAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCH-----DDLKNHSILLICQGGNRDW 258
E F LRL RNSG+ GL+ SS I ++ + H ++ ++ N W
Sbjct: 128 YVENFCLRLERNSGIFGLS----SSNI--NWYNNIHIIRPLYNIPKSELVEYLVSHNIKW 181
Query: 259 VEDPTNRSPLFVRNRIRMSLG 279
ED +N S + RN IR L
Sbjct: 182 FEDESNSSDKYRRNVIRQKLA 202
>sp|Q92JK0|TILS_RICCN tRNA(Ile)-lysidine synthase OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=tilS PE=3 SV=1
Length = 478
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 97/196 (49%), Gaps = 14/196 (7%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
+I++ VSGG DS+AL L W N E L I+VDH LRE+SK+E + +
Sbjct: 21 KISIAVSGGSDSVALLYLANIWAEKN---NIE-------LFVISVDHNLREQSKQETHYI 70
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADD 203
+ + + + + D + +LQE AR+ RY L +C++ I VLL AHH DD
Sbjct: 71 QNISNSLNRKHYSLS---FDHQNNFSNLQERAREGRYDLMTNLCLELDILVLLTAHHEDD 127
Query: 204 QAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLICQGGNRDWVEDPT 263
E F LRL RNSG+ GL+ + ++ K+ + + + N W ED +
Sbjct: 128 YVENFCLRLERNSGIFGLSSSNINWYNNIQIIRPLYNIPKSELVEYLVR-HNIKWFEDES 186
Query: 264 NRSPLFVRNRIRMSLG 279
N S + RN IR L
Sbjct: 187 NSSDKYRRNVIRQKLA 202
>sp|A8F0E8|TILS_RICM5 tRNA(Ile)-lysidine synthase OS=Rickettsia massiliae (strain Mtu5)
GN=tilS PE=3 SV=1
Length = 477
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 96/196 (48%), Gaps = 14/196 (7%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
+I++ VSGG DS+AL L W N E L I+VDH LRE+SK+E + +
Sbjct: 21 KISIAVSGGSDSVALLYLANIWAEKN---NIE-------LFVISVDHNLREQSKQETHYI 70
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADD 203
+ + + + + D + +LQE AR+ RY L +C++ I VLL AHH DD
Sbjct: 71 QNISNSLNRKHYSLS---FDHQNNFSNLQERAREGRYDLMTNLCLELDILVLLTAHHEDD 127
Query: 204 QAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLICQGGNRDWVEDPT 263
E F LRL RNSG+ GL+ + ++ K+ + + N W ED +
Sbjct: 128 YVENFCLRLERNSGIFGLSSSNINWYNNIQIIRPLYNIPKSELVEYLV-SHNIKWFEDES 186
Query: 264 NRSPLFVRNRIRMSLG 279
N S + RN IR L
Sbjct: 187 NSSDKYRRNVIRQKLA 202
>sp|Q98F87|TILS_RHILO tRNA(Ile)-lysidine synthase OS=Rhizobium loti (strain MAFF303099)
GN=tilS PE=3 SV=1
Length = 454
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 132/306 (43%), Gaps = 55/306 (17%)
Query: 83 HRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANI 142
H VSGG DS AL +L F++ G + + LLA+T+DHGLR+ S EA
Sbjct: 20 HGAVAAVSGGSDSTALLLLL----KHHFDRTGSSAK----LLAVTIDHGLRQGSAAEAQA 71
Query: 143 VSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHAD 202
V+ ++ GI + W +P G L AARD RY L + IG+++ H AD
Sbjct: 72 VAKLCAERGIAHRTL--TWTGRKPSTG-LPAAARDARYHLLAEAARAEGIGLIVTGHTAD 128
Query: 203 DQAELFILRLSRNSGVL-----GLAGMAFSS----------QIFSSYAYSCHDDLKNHSI 247
DQAE ++R +R+ + GLAGMA ++ + + + D L+ +
Sbjct: 129 DQAETVLMRHARDRELADLAGRGLAGMAPATLYDWREWIVRPLLGTRRSALRDFLRREHV 188
Query: 248 LLICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSSCSFKSEL----QAVI-------SA 296
W EDPTN F R R+R +L S+ ++ L QA + SA
Sbjct: 189 ---------GWAEDPTNIDEAFERPRVRAALAGESAGHMENTLRLAGQAAVERGQLGASA 239
Query: 297 CRRTRSYVEHVCSNLI--NEAVTVMDQGYAVIDLEILNPSKIEDIFLSK-------FLAL 347
R + LI + A+ + D A+ L IL + FL F+ L
Sbjct: 240 ANLIRRIASQPSTGLIRLDPALLIADDQAAIYALRILLATAGGAAFLPDQARSAALFVRL 299
Query: 348 VLQFIC 353
F+C
Sbjct: 300 KAGFLC 305
>sp|Q0C5V2|TILS_HYPNA tRNA(Ile)-lysidine synthase OS=Hyphomonas neptunium (strain ATCC
15444) GN=tilS PE=3 SV=1
Length = 367
Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 136/335 (40%), Gaps = 42/335 (12%)
Query: 85 IALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIVS 144
+ + VSGG DS+AL +L W + G L A+TVDHGLR ES+ EA V
Sbjct: 27 VGVAVSGGSDSLALLILAHRWAA----RRGRV------LRALTVDHGLRPESRAEAEAVG 76
Query: 145 HRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADDQ 204
+DMGI +I+R + R Q A R R+ + +LL H ADDQ
Sbjct: 77 RLCADMGIEHDILRLEGAAPR------QSALRRGRHAALARTIADKSGHLLLTGHTADDQ 130
Query: 205 AELFILRLSRNSGVLGLAGM------AFSSQIFSSYAYSCHDDLKNHSILLICQGGNRDW 258
AE F++R + SG GLAGM + + ++ ++ + W
Sbjct: 131 AETFLMRARQGSGWYGLAGMRPLSLSPVWPEGEGVFIARPLLGIRREALRAFLRDEGLGW 190
Query: 259 VEDPTNRSPLFVRNRIRMSLGDLSSCSFKSELQAVISACRR---TRSYVEHVCSNLINEA 315
+DP+N +P F R R+R L C S V+S R R + +
Sbjct: 191 ADDPSNDNPAFERVRMRRLL-----CPEMSRNVPVLSLVDRFQTLRMIEDGAIWRWMTAN 245
Query: 316 VTVMDQGYAVIDLEILNPSKIEDIFLSKFLALVLQFICQRQRPVRGSTSKLLLHYIRTFP 375
V + G V P + ++ L ++LQ R+ P RG + + L I +
Sbjct: 246 VRAGEAGIHVASFAGHPPERA-----ARALGMLLQIAAGREMPPRGESLRRLAEEIVSKG 300
Query: 376 CKTSLTAAGCYLCPTPGSRGTKALVCSSID-GPLP 409
T GC + + +C + GPLP
Sbjct: 301 DFRGATLGGCRIT------ARRTHICLKPECGPLP 329
>sp|Q68XR8|TILS_RICTY tRNA(Ile)-lysidine synthase OS=Rickettsia typhi (strain ATCC VR-144
/ Wilmington) GN=tilS PE=3 SV=1
Length = 430
Score = 95.9 bits (237), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 120/255 (47%), Gaps = 34/255 (13%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
+IA+ VSGG DS+AL L W N E L I+VDH LR +SK+E +
Sbjct: 21 KIAIAVSGGSDSVALLYLANIWAEKN---NIE-------LFIISVDHNLRAQSKQENYYI 70
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADD 203
+++ + + D + +LQ AR+ RY L +C++ + VLL AHH DD
Sbjct: 71 QSISNNLKRKYYNLS---FDHQNNFSNLQARAREGRYDLMTNLCLELDVLVLLTAHHEDD 127
Query: 204 QAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKN--HSILLICQGGNR-DWVE 260
E F LRL RNSG+ GL+ SS I L N S L+ N+ W E
Sbjct: 128 YVENFCLRLERNSGIFGLS----SSNIHWYNNIQIIRPLYNIPKSELVKYLVTNKIKWFE 183
Query: 261 DPTNRSPLFVRNRIRMSLGDLSSCSFKSE--LQAVISACR-RTRSYVEHVCS----NLIN 313
D +N S + RN IR L FK E ++A IS + +T +E + I
Sbjct: 184 DESNLSDKYRRNIIRQKL-------FKEENYIKAEISVQQLKTNKLIEDELKPELISAIG 236
Query: 314 EAVTVMDQGYAVIDL 328
EAV + + G+ +DL
Sbjct: 237 EAVKIFEYGFTFLDL 251
>sp|Q9XBG6|TILS_BRAJA tRNA(Ile)-lysidine synthase OS=Bradyrhizobium japonicum (strain
USDA 110) GN=tilS PE=3 SV=1
Length = 361
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 101/209 (48%), Gaps = 15/209 (7%)
Query: 77 AGLKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDG--LLAITVDHGLRE 134
A LK + L VSGGPDS+AL L A W+ G L +TVDHGLR
Sbjct: 19 AELKSAPALVLAVSGGPDSIALMWLAARWQR----------SLARGPRLTVVTVDHGLRA 68
Query: 135 ESKEEANIVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGV 194
E+ EA V +++G+ +R W +PK G L AAR+ RYRL +
Sbjct: 69 EAAREAREVKRLATELGLPHRTLR--WRGAKPKTG-LPAAAREARYRLLMQAARSAGASH 125
Query: 195 LLIAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLICQGG 254
+L AH DDQAE ++RL R SG+ GL+ MA ++ D+ ++ +
Sbjct: 126 VLTAHTRDDQAETLLMRLVRGSGLAGLSAMARLTERDGIVLARPLLDVPKAQLIATLKRA 185
Query: 255 NRDWVEDPTNRSPLFVRNRIRMSLGDLSS 283
+ +DPTNR F R R+R L L++
Sbjct: 186 KIGFADDPTNRDTAFTRPRLRALLPQLAA 214
>sp|Q5FQB6|TILS_GLUOX tRNA(Ile)-lysidine synthase OS=Gluconobacter oxydans (strain 621H)
GN=tilS PE=3 SV=1
Length = 398
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 89/194 (45%), Gaps = 18/194 (9%)
Query: 85 IALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIVS 144
+ L VSGG DSMAL L W+ ++A VDH LR ES EA +
Sbjct: 16 VGLAVSGGADSMALAFLARRWRRN--------------VVAFVVDHALRPESAAEAQLTV 61
Query: 145 HRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADDQ 204
HR++ M ++ ++ L PK G +QE AR R+ + C+ LL+AHHA DQ
Sbjct: 62 HRLAGMNVKARLLT---LAPFPK-GRMQERARHARFEALEAACVSEGCLDLLVAHHAGDQ 117
Query: 205 AELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLICQGGNRDWVEDPTN 264
E +R SG LGL+G+ S + L Q N W+EDP+N
Sbjct: 118 DETVWMRHLHASGPLGLSGIQPVSVRGRIRLVRPLLTFPTARLRLTLQAENLPWIEDPSN 177
Query: 265 RSPLFVRNRIRMSL 278
+ F R R+R L
Sbjct: 178 ANRRFERVRLRQDL 191
>sp|Q5LNU7|TILS_RUEPO tRNA(Ile)-lysidine synthase OS=Ruegeria pomeroyi (strain ATCC
700808 / DSM 15171 / DSS-3) GN=tilS PE=3 SV=1
Length = 419
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 108/226 (47%), Gaps = 31/226 (13%)
Query: 80 KPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEE 139
+P R+ + VSGG DS+AL L A + GE L TVDHGLR ES E
Sbjct: 21 QPPRRLGVAVSGGGDSVALMHLLA--------RCFPRGEVK--LCVATVDHGLRSESASE 70
Query: 140 ANIVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAH 199
A +V+ + + +G+ E + G +G+LQ+ AR RY L +++++ + +AH
Sbjct: 71 AALVARQAAGLGLPHETLLWT---GWTGEGNLQDQARRARYGLLTDWALRNRVTTVALAH 127
Query: 200 HADDQAELFILRLSRNSGVLGLAGMA---------FSSQIFSSYAYSCHDDLKNHSILLI 250
ADDQAE ++RL R++GV GLA MA + + D L+ I
Sbjct: 128 TADDQAETLLMRLGRSAGVSGLAAMAPRRMQDGVVLVRPLLGITRDALRDFLRAEGIA-- 185
Query: 251 CQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSSCSFKSELQAVISA 296
W EDP+N + R + R +L L+ ++ A ++A
Sbjct: 186 -------WAEDPSNEDIRYDRIKARQALAGLAPMGIDAQRLAEVAA 224
>sp|C3PM75|TILS_RICAE tRNA(Ile)-lysidine synthase OS=Rickettsia africae (strain ESF-5)
GN=tilS PE=3 SV=1
Length = 478
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 96/196 (48%), Gaps = 14/196 (7%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
+I++ VSGG DS+AL L W N E L I+VDH LRE+SK+E + +
Sbjct: 21 KISIAVSGGSDSVALLYLANIWAEKN---NIE-------LFVISVDHNLREQSKQETHYI 70
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADD 203
+ + + + + + +LQE AR+ RY L +C++ I VLL AHH DD
Sbjct: 71 QNISNSLNRKHYSLS---FYHQNNFSNLQERAREGRYDLMTNLCLELDILVLLTAHHEDD 127
Query: 204 QAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLICQGGNRDWVEDPT 263
E F LRL RNSG+ GL+ + ++ K+ + + + N W ED +
Sbjct: 128 YVENFCLRLERNSGIFGLSSSNINWYNNIQIIRPLYNIPKSKLVEYLVR-HNIKWFEDES 186
Query: 264 NRSPLFVRNRIRMSLG 279
N S + RN IR L
Sbjct: 187 NSSDKYRRNVIRQKLA 202
>sp|Q6NAQ6|TILS_RHOPA tRNA(Ile)-lysidine synthase OS=Rhodopseudomonas palustris (strain
ATCC BAA-98 / CGA009) GN=tilS PE=3 SV=1
Length = 346
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 106/230 (46%), Gaps = 14/230 (6%)
Query: 61 TDMTKYREAFSRRMAMAGLKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFI 120
TD +RR+ A K I L VSGGPDS+AL L A W+ + G A
Sbjct: 4 TDHEAVSATEARRL-FADWKAAPAIVLAVSGGPDSLALMWLAARWRKA--LKRGPA---- 56
Query: 121 DGLLAITVDHGLREESKEEANIVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRY 180
L +TVDHGLR E+ EA V + + + +R W +P G +Q AAR RY
Sbjct: 57 --LAVVTVDHGLRPEAAAEARAVKRLAASLDLPHRTLR--WSGDKPSTG-IQAAARGARY 111
Query: 181 RLFQKVCIQHQIGVLLIAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHD 240
RL K ++ AH DDQAE ++RLSR SG+ GLA MA +
Sbjct: 112 RLLAKAAKTLGASHVMTAHTRDDQAETVLMRLSRGSGIAGLAAMAREIERDGVVLARPLL 171
Query: 241 DLKNHSILLICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSS--CSFKS 288
D+ ++ + DP+N P F R R+R + L++ C +S
Sbjct: 172 DVPKARLIATLAKARIAFATDPSNADPRFTRPRLRELMPQLAAEGCDARS 221
>sp|Q6AJ19|TILS_DESPS tRNA(Ile)-lysidine synthase OS=Desulfotalea psychrophila (strain
LSv54 / DSM 12343) GN=tilS PE=3 SV=1
Length = 471
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 105/203 (51%), Gaps = 20/203 (9%)
Query: 79 LKPHHRIALGVSGGPDSMALC-VLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLR-EES 136
LK +I +GVSGG DS+AL +LT N + + L+AI +DHGLR +E
Sbjct: 25 LKSGDKIIVGVSGGADSIALLHILTE------LNLDLQ-------LIAIYIDHGLRPDEI 71
Query: 137 KEEANIVSHRVSDMGIRCEIVRCDWLDGRP-KQGHLQEAARDMRYRLFQKVCIQHQIGVL 195
+E + V + +G E + D L + + ++AAR +RY+ F + ++ +
Sbjct: 72 PQEISFVKGQAGAVGAEFESISVDVLALKNCDKLSTEDAARRLRYQAFAEARERYGAKYI 131
Query: 196 LIAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLICQGGN 255
++AH+ADDQ E F +RL R SG GL+GM + + L +LL Q
Sbjct: 132 MVAHNADDQVEEFFIRLLRGSGRRGLSGMPYQ----NGLLLRPLLSLTKADLLLYLQERG 187
Query: 256 RDWVEDPTNRSPLFVRNRIRMSL 278
D ED +NR P ++RNRIR+ L
Sbjct: 188 IDHCEDSSNREPCYLRNRIRLDL 210
>sp|Q2GC97|TILS_NOVAD tRNA(Ile)-lysidine synthase OS=Novosphingobium aromaticivorans
(strain DSM 12444) GN=tilS PE=3 SV=1
Length = 326
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 95/200 (47%), Gaps = 20/200 (10%)
Query: 79 LKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKE 138
L P R+ L VSGGPDS+AL +L Q +F TVDHGLR ES
Sbjct: 22 LDPSGRVCLAVSGGPDSLALMLLM---------QEVAPRDFC----VATVDHGLRAESAA 68
Query: 139 EANIVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIA 198
EA +V+ GI +R D G +QE AR RY + + + ++ A
Sbjct: 69 EAAMVAGLCEMRGIAYHTLRLDLAGG----SAVQERARKARYAALADLARRDGLSAVVTA 124
Query: 199 HHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDL---KNHSILLICQGGN 255
HHADDQAE ++RL+R +G+ GLAGM +S + + L + ++ + +
Sbjct: 125 HHADDQAETLVMRLNRGAGLRGLAGMRAASSVPGAGEVRLLRPLLGWRRAELVALVEDAG 184
Query: 256 RDWVEDPTNRSPLFVRNRIR 275
V DP+N + R RIR
Sbjct: 185 LAPVLDPSNHDHRYERVRIR 204
>sp|Q65PF4|TILS_BACLD tRNA(Ile)-lysidine synthase OS=Bacillus licheniformis (strain DSM
13 / ATCC 14580) GN=tilS PE=3 SV=1
Length = 476
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 111/249 (44%), Gaps = 16/249 (6%)
Query: 88 GVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLR-EESKEEANIVSHR 146
GVSGGPDSMAL L A T + L+A VDH R EES+ + V
Sbjct: 23 GVSGGPDSMAL--LHALHHTVPASAT---------LIAAHVDHMFRGEESERDMRFVQDY 71
Query: 147 VSDMGIRCEIVRCDWLDGRPKQG-HLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADDQA 205
GI+CE V+ D L + + Q AAR+ RY FQ++ +H+ L++ HH DDQ
Sbjct: 72 CEAEGIQCEAVQIDVLAFAAENNLNKQAAARECRYAFFQELMKRHRAEYLVLGHHGDDQV 131
Query: 206 ELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLICQGGNRDWVEDPTNR 265
E ++++++ + +GLAG+ + S + L +L C+ + DP+N
Sbjct: 132 ETMLMKMAKGTVGIGLAGIQPKRRFDSGWLLRPFLKLSKDDLLAYCKENRIPFRTDPSNS 191
Query: 266 SPLFVRNRIR---MSLGDLSSCSFKSELQAVISACRRTRSYVEHVCSNLINEAVTVMDQG 322
+ RNR R + S Q+V Y++ + + +N +T
Sbjct: 192 EDDYTRNRFRHHVLPFLKKESEDVHKRFQSVSEFLTEDELYLQALTKDKMNTVITSKSSS 251
Query: 323 YAVIDLEIL 331
I +E L
Sbjct: 252 GVEISIERL 260
>sp|B0UGN1|TILS_METS4 tRNA(Ile)-lysidine synthase OS=Methylobacterium sp. (strain 4-46)
GN=tilS PE=3 SV=1
Length = 344
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 81/178 (45%), Gaps = 15/178 (8%)
Query: 87 LGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIVSHR 146
L VSGGPDS AL A +L TVDHGLR ES EEA V+
Sbjct: 32 LAVSGGPDSTALMGCAAALPP------------RVPVLVATVDHGLRPESGEEAAGVAAL 79
Query: 147 VSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADDQAE 206
+G+ I+ W +P+ LQEAAR RY L + + G +L AH DDQAE
Sbjct: 80 AGRLGLPHRIL--TWRGEKPRT-RLQEAARAARYDLLLGLAREAGAGAILTAHTLDDQAE 136
Query: 207 LFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLICQGGNRDWVEDPTN 264
++RL SG GLAG+A + ++ DL ++ C + DP N
Sbjct: 137 TVLMRLCAGSGPAGLAGIAPARRLGGLLLGRPFLDLPKARLVATCAAAGWPFAVDPGN 194
>sp|Q63HD6|TILS_BACCZ tRNA(Ile)-lysidine synthase OS=Bacillus cereus (strain ZK / E33L)
GN=tilS PE=3 SV=1
Length = 476
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 79 LKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLR-EESK 137
LK H I +GVSGGPDS+AL + A +F ++ VDH R +ES
Sbjct: 19 LKEHSTIVVGVSGGPDSLALLYYLL--------EKRAAKQF--EIVVAHVDHMFRGDESH 68
Query: 138 EEANIVSHRVSDMGIRCEIVRCDWLDGRPKQG-HLQEAARDMRYRLFQKVCIQHQIGVLL 196
E+ V +G+ CE +R + + + G + Q AAR+ RY +++ ++ +
Sbjct: 69 EDLQFVQDLCKGLGVICETIRINVSQYQQQYGMNAQVAARECRYAFLERIMKKYDARYVA 128
Query: 197 IAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLICQGGNR 256
+ HH DDQ E ++RL R S G AG+A + Y + I+ C
Sbjct: 129 LGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTKEEIVDYCNKLKI 188
Query: 257 DWVEDPTNRSPLFVRNRIR 275
DP+N+ ++ RNR+R
Sbjct: 189 IPRIDPSNKKEVYTRNRLR 207
>sp|Q839B3|TILS_ENTFA tRNA(Ile)-lysidine synthase OS=Enterococcus faecalis (strain ATCC
700802 / V583) GN=tilS PE=3 SV=1
Length = 462
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 121/285 (42%), Gaps = 18/285 (6%)
Query: 70 FSRRMAMAGL-KPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITV 128
F +R G +PH I + VSGG DSMAL L Q E + L+ V
Sbjct: 5 FYKRGKEQGFWQPHQTIVVAVSGGVDSMALLTL--------MEQVAEKEQL--QLVVAHV 54
Query: 129 DHGLREESKEEANIVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCI 188
+H LRE S +EA ++ + R W D KQ +L+ AR RY F++V
Sbjct: 55 NHQLREASAQEAQYLATYCQQRELTYYETR--WEDPE-KQRNLEAKARTFRYEFFKEVME 111
Query: 189 QHQIGVLLIAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSIL 248
VL+ AHH DDQAE +++L R + AG+ + +
Sbjct: 112 IEGAAVLMTAHHLDDQAETILMKLIRGTNFSHSAGIKERRPFATGELIRPLLIYPKEELY 171
Query: 249 LICQGGNRDWVEDPTNRSPLFVRNRIR---MSLGDLSSCSFKSELQAVISACRRTRSYVE 305
Q + ED TN++ ++RNR+R + L + F ++ + + R + +++
Sbjct: 172 QFAQRQAFVYFEDETNQTNEYLRNRLRNQVLPLLKQENPQFLDQIASFSNEQRFAQEFIQ 231
Query: 306 HVCSNLINEAVTVMDQGYAVIDLEILNPSK-IEDIFLSKFLALVL 349
++EAV QG+ + +L + + FL+ F L
Sbjct: 232 EQIEPQLSEAVEPTKQGWRIPLKRLLKETPAYQHFFLTAFFQKTL 276
>sp|P37563|TILS_BACSU tRNA(Ile)-lysidine synthase OS=Bacillus subtilis (strain 168)
GN=tilS PE=1 SV=2
Length = 472
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 16/238 (6%)
Query: 85 IALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLR-EESKEEANIV 143
I +GVSGGPDSMAL L A G + N ++A VDH R ES+E+ V
Sbjct: 20 IIVGVSGGPDSMAL--LHALHTLCGRSAN---------VIAAHVDHRFRGAESEEDMRFV 68
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQG-HLQEAARDMRYRLFQKVCIQHQIGVLLIAHHAD 202
+ CE + + ++G + Q AARD RY+ F+++ +HQ L +AHH D
Sbjct: 69 QAYCKAEQLVCETAQINVTAYAQEKGLNKQAAARDCRYQFFEEIMSKHQADYLALAHHGD 128
Query: 203 DQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLICQGGNRDWVEDP 262
DQ E +++L++ + GLAGM + + + IL C + D
Sbjct: 129 DQVETMLMKLAKGTLGTGLAGMQPVRRFGTGRIIRPFLTITKEEILHYCHENGLSYRTDE 188
Query: 263 TNRSPLFVRNRIRMSLGDL---SSCSFKSELQAVISACRRTRSYVEHVCSNLINEAVT 317
+N + RNR R ++ S Q V A +++ + + +N+ +T
Sbjct: 189 SNAKDDYTRNRFRKTVLPFLKQESPDVHKRFQKVSEALTEDEQFLQSLTKDEMNKVIT 246
>sp|Q5NLX8|TILS_ZYMMO tRNA(Ile)-lysidine synthase OS=Zymomonas mobilis subsp. mobilis
(strain ATCC 31821 / ZM4 / CP4) GN=tilS PE=3 SV=1
Length = 329
Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 133/295 (45%), Gaps = 32/295 (10%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
++ + VSGG DS+AL +L G +F + A+TVDHG+R E+ EEA V
Sbjct: 31 KLGIAVSGGSDSLALLLL------------GAVSDF--PVEAVTVDHGMRPEAAEEARFV 76
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADD 203
+ +G+ +I+ +Q AAR RY L + + +G L+ AHHADD
Sbjct: 77 AQICQQIGVPHQILTTKI---EANGEGMQAAARIRRYALMAEWAKEKNVGALMTAHHADD 133
Query: 204 QAELFILRLSRNSGVLGLAGM----AFSSQIFSSYAYSCHDDLKNHSILLICQGGNRDWV 259
QAE F++R +R SG+ GLA + +++ ++ I + +V
Sbjct: 134 QAETFLMRAARGSGLNGLAAIRPDVVITAEGQKLRLLRPLLGFTRSALAEIVEKAGFTFV 193
Query: 260 EDPTNRSPLFVRNRIRMSLGDLSSCSFKSELQAVISACRRTRSYVEHVCSNLINEAVTVM 319
DP+N +P + R R L S + + C+++ +E + + A +
Sbjct: 194 SDPSNDNPHYDRTHFRRLL-KASPWINRQHIAEAARYCQQSEEAIEWITAK--EAAARIR 250
Query: 320 DQGYAVIDLEILNPSKIEDIFLSKFLALVLQFICQRQRPVRGSTSKLLLHYIRTF 374
+G ++ L+P+++ L + + ++ I +RGS L +IR+
Sbjct: 251 KKG----EVLYLDPTELPIEILRRLVLRAMETITGNT-ALRGSA---LSRFIRSL 297
>sp|Q81J84|TILS_BACCR tRNA(Ile)-lysidine synthase OS=Bacillus cereus (strain ATCC 14579 /
DSM 31) GN=tilS PE=3 SV=1
Length = 476
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 79 LKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLR-EESK 137
LK I +GVSGGPDS+AL + A + ++ ++A VDH R +ES
Sbjct: 19 LKNDSTIVVGVSGGPDSLALLY---------YLLEKRAEKQLEIVVA-HVDHMFRGDESY 68
Query: 138 EEANIVSHRVSDMGIRCEIVRCDWLDGRPKQG-HLQEAARDMRYRLFQKVCIQHQIGVLL 196
E+ V ++GI CE +R + + + G + Q AAR+ RY +++ ++ +
Sbjct: 69 EDLQFVQGLCEELGIICETIRINVSQYQQQYGMNAQVAARECRYAFLERIMKKYDARYVA 128
Query: 197 IAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLICQGGNR 256
+ HH DDQ E ++RL R S G AG+A + Y + I+ C N
Sbjct: 129 LGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTKEEIVDYCNKLNL 188
Query: 257 DWVEDPTNRSPLFVRNRIR 275
DP+N+ ++ RNR+R
Sbjct: 189 MPRIDPSNKKEVYTRNRLR 207
>sp|Q88Z33|TILS_LACPL tRNA(Ile)-lysidine synthase OS=Lactobacillus plantarum (strain ATCC
BAA-793 / NCIMB 8826 / WCFS1) GN=tilS PE=3 SV=1
Length = 448
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 25/215 (11%)
Query: 68 EAFSRRMAMAGL-KPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAI 126
+ F+R++A A L P + + VS G DSM L L Q A E ++A
Sbjct: 5 QKFNRQLAAAKLLSPQQTVVVAVSTGVDSMVLLHLL---------QRLPAAERPRVVVA- 54
Query: 127 TVDHGLREESKEEANIVSHRVSDMGIRCEIVRCDWLDG-RPKQGHLQEAARDMRYRLFQK 185
V+H LRE+S+ EA+ + ++ +V DWL PK G ++ A R RY +F K
Sbjct: 55 HVNHHLREQSQMEADYLRQYCQQQNLK--LVMADWLPAAHPKSG-IEAAGRQFRYHVFAK 111
Query: 186 VCIQHQIGVLLIAHHADDQAELFILRLSRNSGVLGLAGMAFS-----SQIFSSYAYSCHD 240
V +++ +L AHHA+DQ E ++++L+R + L G+A S ++ D
Sbjct: 112 VMRENRATAVLTAHHANDQVETYLMKLARGGDISQLTGIATSRPFATGRLIRPLLTWSKD 171
Query: 241 DLKNHSILLICQGGNRDWVEDPTNRSPLFVRNRIR 275
L+N++ + + ED TN+ RNRIR
Sbjct: 172 QLRNYAA-----EQHVVYFEDVTNQDVALTRNRIR 201
>sp|Q73FE5|TILS_BACC1 tRNA(Ile)-lysidine synthase OS=Bacillus cereus (strain ATCC 10987)
GN=tilS PE=3 SV=1
Length = 476
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 79 LKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLR-EESK 137
LK I +GVSGGPDS+AL + A +F ++ VDH R +ES
Sbjct: 19 LKERSTIVVGVSGGPDSVALLYYLL--------EKRAAKQF--EIVVAHVDHMFRGDESH 68
Query: 138 EEANIVSHRVSDMGIRCEIVRCDWLDGRPKQG-HLQEAARDMRYRLFQKVCIQHQIGVLL 196
E+ V ++G+ CE +R + + + G + Q AAR+ RY +++ ++ +
Sbjct: 69 EDLQFVQDLCKELGVICETIRINVSQYQQQYGMNAQVAARECRYAFLERIMKKYDARYVA 128
Query: 197 IAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLICQGGNR 256
+ HH DDQ E ++RL R S G AG+A + Y + I+ C
Sbjct: 129 LGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTKEEIVDYCHKLKI 188
Query: 257 DWVEDPTNRSPLFVRNRIR 275
DP+N+ ++ RNR+R
Sbjct: 189 IPRIDPSNKKEVYTRNRLR 207
>sp|Q81VX7|TILS_BACAN tRNA(Ile)-lysidine synthase OS=Bacillus anthracis GN=tilS PE=3 SV=1
Length = 476
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 92/199 (46%), Gaps = 12/199 (6%)
Query: 79 LKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLR-EESK 137
LK I +GVSGGPDS+AL + A +F ++ VDH R +ES
Sbjct: 19 LKERSTIVVGVSGGPDSLALLYYLL--------EKRAAKQF--EIVVAHVDHMFRGDESH 68
Query: 138 EEANIVSHRVSDMGIRCEIVRCDWLDGRPKQG-HLQEAARDMRYRLFQKVCIQHQIGVLL 196
E+ V +G+ CE +R + + + G + Q AAR+ RY +++ ++ +
Sbjct: 69 EDLQFVQDLCKGLGVICETIRINVSQYQKQYGMNAQVAARECRYAFLERIMKKYDARYVA 128
Query: 197 IAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLICQGGNR 256
+ HH DDQ E ++RL R S G AG+A + Y + I+ C
Sbjct: 129 LGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTKEEIVNYCNELKI 188
Query: 257 DWVEDPTNRSPLFVRNRIR 275
DP+N+ ++ RNR+R
Sbjct: 189 IPRIDPSNKKEVYTRNRLR 207
>sp|Q6HPV4|TILS_BACHK tRNA(Ile)-lysidine synthase OS=Bacillus thuringiensis subsp.
konkukian (strain 97-27) GN=tilS PE=3 SV=1
Length = 476
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 92/199 (46%), Gaps = 12/199 (6%)
Query: 79 LKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLR-EESK 137
LK I +GVSGGPDS+AL + A +F ++ VDH R +ES
Sbjct: 19 LKERSTIVVGVSGGPDSLALLYYLL--------EKRAAKQF--EIVVAHVDHMFRGDESH 68
Query: 138 EEANIVSHRVSDMGIRCEIVRCDWLDGRPKQG-HLQEAARDMRYRLFQKVCIQHQIGVLL 196
E+ V +G+ CE +R + + + G + Q AAR+ RY +++ ++ +
Sbjct: 69 EDLQFVQDLCKGLGVICETIRINVSQYQKQYGMNAQVAARECRYAFLERIMKKYDARYVA 128
Query: 197 IAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLICQGGNR 256
+ HH DDQ E ++RL R S G AG+A + Y + I+ C
Sbjct: 129 LGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTKEEIVNYCNELKI 188
Query: 257 DWVEDPTNRSPLFVRNRIR 275
DP+N+ ++ RNR+R
Sbjct: 189 IPRIDPSNKKEVYTRNRLR 207
>sp|Q5WAE0|TILS_BACSK tRNA(Ile)-lysidine synthase OS=Bacillus clausii (strain KSM-K16)
GN=tilS PE=3 SV=1
Length = 469
Score = 82.8 bits (203), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 22/202 (10%)
Query: 85 IALGVSGGPDSMALCVLTAG----WKTGGFNQNGEAGEFIDGLLAITVDHGLR-EESKEE 139
+ + VSGGPDSMAL + A WK L + V+H LR EES ++
Sbjct: 21 VLVAVSGGPDSMALLAIMANLREKWKLN--------------LFGVHVNHRLRGEESNKD 66
Query: 140 ANIVSHRVSDMGIRCEIVRCDWLDGRPKQGHL--QEAARDMRYRLFQKVCIQHQIGVLLI 197
A +V + +G+ C + D + + H+ Q+AAR +RY++FQ + VLL
Sbjct: 67 AELVQSFSARLGVPCNVKDVD-VAAFKAEHHVGTQQAARALRYQVFQGEMERVHATVLLT 125
Query: 198 AHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLICQGGNRD 257
AHH DD+ E ++L+R + L G+A + + + SI+ C
Sbjct: 126 AHHGDDEVETAFMKLTRGTTPLTKLGIAATRPFANGVLARPLLEETKRSIVAYCHEKAIP 185
Query: 258 WVEDPTNRSPLFVRNRIRMSLG 279
+ D +N S + RNR RM++
Sbjct: 186 YRIDQSNFSDAYTRNRFRMNMA 207
>sp|B8IP16|TILS_METNO tRNA(Ile)-lysidine synthase OS=Methylobacterium nodulans (strain
ORS2060 / LMG 21967) GN=tilS PE=3 SV=1
Length = 339
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 98/218 (44%), Gaps = 16/218 (7%)
Query: 67 REAFSRRM-AMAGLKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLA 125
RE F+RR+ G + L VSGGPDS AL GG + + ++
Sbjct: 10 REEFARRLDRWLGPGAAGGVVLAVSGGPDSTALM--------GGAARL----PPLVPVMV 57
Query: 126 ITVDHGLREESKEEANIVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQK 185
TVDHGLR E+ EA V+ +G+ I+ W +P+ LQEAAR RYRL
Sbjct: 58 ATVDHGLRPEAAAEAEAVARLAGRLGLPHRIL--AWTGPKPRT-RLQEAARAARYRLLLD 114
Query: 186 VCIQHQIGVLLIAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNH 245
+ + LL AH DDQAE ++RL SG GL G+ + DL
Sbjct: 115 LAREQGAAALLTAHTLDDQAETVLMRLCAGSGPAGLGGIEPVRHLGGLALVRPFLDLPKA 174
Query: 246 SILLICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSS 283
++ C +V DP N F R R+R + L++
Sbjct: 175 RLVATCAAEGWPFVVDPGNADARFARGRLRRVMPHLAA 212
>sp|Q5L3T3|TILS_GEOKA tRNA(Ile)-lysidine synthase OS=Geobacillus kaustophilus (strain
HTA426) GN=tilS PE=1 SV=1
Length = 464
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 98/241 (40%), Gaps = 23/241 (9%)
Query: 85 IALGVSGGPDSMALC----VLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLR-EESKEE 139
+ +GVSGGPDS+AL L WK ++A VDH R ES+EE
Sbjct: 21 VIVGVSGGPDSLALLHVFLSLRDEWKLQ--------------VIAAHVDHMFRGRESEEE 66
Query: 140 ANIVSHRVSDMGIRCEIVRCDWLDGRPKQG-HLQEAARDMRYRLFQKVCIQHQIGVLLIA 198
V + I CE + D + G QEAAR RYR F ++ +HQ G + +
Sbjct: 67 MEFVKRFCVERRILCETAQIDVPAFQRSAGLGAQEAARICRYRFFAELMEKHQAGYVAVG 126
Query: 199 HHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLICQGGNRDW 258
HH DDQ E ++RL R S G AG+ Y + I C+
Sbjct: 127 HHGDDQVETILMRLVRGSTSKGYAGIPVKRPFHGGYLIRPFLAVSRAEIEAYCRQMGLSP 186
Query: 259 VEDPTNRSPLFVRNRIRMSLGDL---SSCSFKSELQAVISACRRTRSYVEHVCSNLINEA 315
DP+N + RNR R + L + Q ++E + ++ +N+
Sbjct: 187 RCDPSNEKDDYTRNRFRHHIVPLLRQENPRLHERFQQYSEMMAEDEQFLEELAADALNKV 246
Query: 316 V 316
+
Sbjct: 247 M 247
>sp|Q724J4|TILS_LISMF Bifunctional protein TilS/HprT OS=Listeria monocytogenes serotype
4b (strain F2365) GN=tilS/hprT PE=3 SV=1
Length = 648
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 79 LKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKE 138
++ ++ + VSGGPDS+AL L W N N E I ++H LRE +
Sbjct: 18 IRSDDKLLVAVSGGPDSLAL--LHFLW-----NSNLVPKEAIS---VAHLNHHLRENAAN 67
Query: 139 EANIVSHRVSDMGIRCEIVRCDWLDGRPK--QGHLQEAARDMRYRLFQKVCIQHQIGVLL 196
E N+V GI I D + R + Q ++E AR +RY F+KV + +I L
Sbjct: 68 EQNVVETFCESQGIPFYIEEVD-VKSRAESLQKGIEETARIVRYDFFEKVMAEKKINKLA 126
Query: 197 IAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLICQGGNR 256
+AHHADDQ E ++RL R S +G +G+ ++ A + I+ Q
Sbjct: 127 LAHHADDQIETILMRLVRGSASIGWSGIQPKRELKGGQAIRPFLPITKAEIIDYAQKHEL 186
Query: 257 DWVEDPTNRSPLFVRNRIRMSL 278
+ D +N S + RNR R L
Sbjct: 187 AYEIDESNTSQEYTRNRYRAQL 208
>sp|Q8YAC7|TILS_LISMO Bifunctional protein TilS/HprT OS=Listeria monocytogenes serovar
1/2a (strain ATCC BAA-679 / EGD-e) GN=tilS/hprT PE=3
SV=1
Length = 648
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 79 LKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKE 138
++ ++ + VSGGPDS+AL L W N N E I ++H LRE + +
Sbjct: 18 IRSDDKLLVAVSGGPDSLAL--LHFLW-----NSNLVPKEAIS---VAHLNHQLRENAAK 67
Query: 139 EANIVSHRVSDMGIRCEIVRCDWLDGRPK--QGHLQEAARDMRYRLFQKVCIQHQIGVLL 196
E +V GI I D + R + Q L+E AR +RY F+KV + I L+
Sbjct: 68 EQRVVETFCERQGIPFYIEEVD-IKSRAQSLQKGLEETARIVRYDFFEKVMAEKNINKLV 126
Query: 197 IAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLICQGGNR 256
+AHHADDQ E ++RL R S +G +G+ ++ A + I+ Q
Sbjct: 127 LAHHADDQIETILMRLVRGSASIGWSGIQPKRELKGGQAIRPFLPITKAEIIDYAQKHEL 186
Query: 257 DWVEDPTNRSPLFVRNRIRMSL 278
+ D +N S + RNR R L
Sbjct: 187 AYEIDESNTSQEYTRNRYRAQL 208
>sp|Q10441|TILS_SCHPO Probable tRNA(Ile)-lysidine synthase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC12B10.08c PE=3 SV=1
Length = 456
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 102/231 (44%), Gaps = 21/231 (9%)
Query: 62 DMTKYREAFSRRMAMAGLKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFID 121
D K +E ++ +++ H R+ + VSGG DSM L + G +FI
Sbjct: 2 DTIKLKEFYNSLVSIRRRVGHRRLGIAVSGGVDSMLLSWFMKESQI----MFGWPNQFI- 56
Query: 122 GLLAITVDHGLREESKEEANIVSHRVSDMGIRCEIVRCDW-LDGRPKQGHLQEAARDMRY 180
A VDH +R+ S EEA ++ M I + +W D +L+ AR+ RY
Sbjct: 57 ---AFVVDHRIRKNSTEEALQTIWNLNRMLIPNVYLNINWGNDDVHSLTNLETIAREHRY 113
Query: 181 RLFQKVCIQHQIGVLLIAHHADDQAELFILR-LSRNSGVL-GLAGMAFSSQIFSSYAYSC 238
++ + CI H I + AHHA+DQAE +R L R G GL M SQI S +
Sbjct: 114 QVLTRACITHNIRHICTAHHANDQAETIFMRLLRRKPGTWGGLCAMKPVSQIPESDSICG 173
Query: 239 HDDLK---------NHSILLICQGGNRDWVEDPTNRS-PLFVRNRIRMSLG 279
+++ + IL + W EDPTN L RN IR L
Sbjct: 174 ASNIELLRPLLPYYKNQILNTAKQHGIAWEEDPTNADINLTPRNAIRRFLN 224
>sp|Q181G3|TILS_CLOD6 tRNA(Ile)-lysidine synthase OS=Clostridium difficile (strain 630)
GN=tilS PE=3 SV=1
Length = 462
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 123/252 (48%), Gaps = 19/252 (7%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLRE-ESKEEANI 142
+I LG+SGGPDS+ L + K +F + A ++H +R E++++A
Sbjct: 21 KIVLGLSGGPDSVCLLHVLNRLKK----------DFNIEIYAAHLNHQIRGIEAQKDALY 70
Query: 143 VSHRVSDMGIRCEIVRCDWLDGRPKQG-HLQEAARDMRYRLFQKVCIQHQIGVLLIAHHA 201
VS DMGI + + +G L+E AR +RY +F ++ + + + I H+
Sbjct: 71 VSKLCEDMGIIFFVKSINVPKYCENEGLSLEEGARKLRYEMFYEIKDKIKANKIAIGHNL 130
Query: 202 DDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLICQGGNRDWVED 261
+DQAE ++R+ R +G+ GL G+ + I + D++ + I C+ N + D
Sbjct: 131 NDQAETVMMRIMRGTGLKGLKGIDY---IRDNCIIRPILDVERNEIEEYCEAYNLNPRID 187
Query: 262 PTNRSPLFVRNRIRMSLGDLSSCSFKSE-LQAVI---SACRRTRSYVEHVCSNLINEAVT 317
TN ++ RN+IR+ L +F S +++++ ++ + Y+E E
Sbjct: 188 KTNLENIYTRNKIRLDLLPYMKDNFNSNVIESIVRMSNSLKSDNDYIEKEAEAKFREVSN 247
Query: 318 VMDQGYAVIDLE 329
+ ++G+ I+L+
Sbjct: 248 IKEKGFVEINLD 259
>sp|Q9HXZ3|TILS_PSEAE tRNA(Ile)-lysidine synthase OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=tilS PE=3
SV=1
Length = 442
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 97/221 (43%), Gaps = 20/221 (9%)
Query: 118 EFIDGLLAITVDHGLREESKEEANIVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARD 177
E + L A+ V HGL+ + +GI + R G G +++AARD
Sbjct: 47 EALPALSALHVHHGLQAAADGWPAHCQAVCRSLGIPLRVERVQVAVG----GSIEQAARD 102
Query: 178 MRYRLFQKVCIQHQIGVLLIAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYS 237
RYR FQ + Q VLL A H DDQAE + RL R +G+ GLA M S +
Sbjct: 103 ARYRAFQANLGEGQ--VLLTAQHLDDQAETLLFRLLRGAGLRGLAAMPASRPLGGGRLCR 160
Query: 238 CHDDLKNHSILLICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSSCSFKSELQAVISAC 297
+ + Q DWVEDP+N+ P F RN +R + + + QAV
Sbjct: 161 PLLGVSRAELEAYAQAHRLDWVEDPSNQDPRFSRNYLRREIMPRLASHWP---QAVAGMA 217
Query: 298 RRTRSYVEHVCSNLINEAVTVMDQGYAVIDLEI-LNPSKIE 337
R C+ + EA ++ + A IDL PS+++
Sbjct: 218 R---------CAAHLREAEDLLAE-LAAIDLRACRQPSELD 248
>sp|Q8U9L7|TILS_AGRT5 tRNA(Ile)-lysidine synthase OS=Agrobacterium tumefaciens (strain
C58 / ATCC 33970) GN=tilS PE=3 SV=1
Length = 443
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 80 KPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLL--AITVDHGLREESK 137
KP H I + +SGG DS L + Q +A + DGL A+TVDH LR ES
Sbjct: 28 KPTH-ILVAISGGSDSTGLLLAL---------QEAKAAD-DDGLRLSAVTVDHALRPESA 76
Query: 138 EEANIVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLI 197
+EA V+ +++GI R W +P G L EA+R RYRL V + +++
Sbjct: 77 DEARKVAMLCAELGIPHTTRR--WDGPKPASG-LSEASRLARYRLIADVAREIGADLVVS 133
Query: 198 AHHADDQAELFILRLSRNSGV--LGLAGMAFSSQIFSSYAYSCHDDL--KNHSILLICQG 253
H DQ E +R +R+ G LGL+GMA + ++ ++ + L + I
Sbjct: 134 GHTIGDQRETVAMRAARSGGSDNLGLSGMA-DAVLYDAHLWIMRPFLACERQVIRDYVSS 192
Query: 254 GNRDWVEDPTNRSPLFVRNRIRMSL 278
+R W++DP+N + + R R+R +L
Sbjct: 193 RSRHWLDDPSNENIRYERVRVRQTL 217
>sp|Q8CQV3|TILS_STAES tRNA(Ile)-lysidine synthase OS=Staphylococcus epidermidis (strain
ATCC 12228) GN=tilS PE=3 SV=1
Length = 432
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 79/194 (40%), Gaps = 10/194 (5%)
Query: 85 IALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIVS 144
I + VS G DSM+L ++ + L + V+HGLRE+S EE +
Sbjct: 14 IVVAVSTGIDSMSLL----------YSLLNDYQHTYRKLTCVHVNHGLREQSYEEEAFLR 63
Query: 145 HRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADDQ 204
I I R D D +Q+ AR RY F + Q + VLL AHH DDQ
Sbjct: 64 EYCHQHHIDIYIKRLDLSDIVADGNSIQQEARQRRYEWFGDIIAQLRADVLLTAHHLDDQ 123
Query: 205 AELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLICQGGNRDWVEDPTN 264
E I RL GM + S Y +LK IL + ED +N
Sbjct: 124 FETIIYRLFTGRSTRNSLGMTYESYFNQYKVYRPMLNLKKTEILAYQYANQIPYYEDMSN 183
Query: 265 RSPLFVRNRIRMSL 278
+ +VRN IR +
Sbjct: 184 QDRKYVRNDIRQRI 197
>sp|Q5HRP5|TILS_STAEQ tRNA(Ile)-lysidine synthase OS=Staphylococcus epidermidis (strain
ATCC 35984 / RP62A) GN=tilS PE=3 SV=1
Length = 432
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 79/194 (40%), Gaps = 10/194 (5%)
Query: 85 IALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIVS 144
I + VS G DSM+L ++ + L + V+HGLRE+S EE +
Sbjct: 14 IVVAVSTGIDSMSLL----------YSLLNDYQHTYRKLTCVHVNHGLREQSYEEEAFLR 63
Query: 145 HRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADDQ 204
I I R D D +Q+ AR RY F + Q + VLL AHH DDQ
Sbjct: 64 EYCHQHHIDIYIKRLDLSDIVADGNSIQQEARQRRYEWFGDIIAQLRADVLLTAHHLDDQ 123
Query: 205 AELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLICQGGNRDWVEDPTN 264
E I RL GM + S Y +LK IL + ED +N
Sbjct: 124 FETIIYRLFTGRSTRNSLGMTYESYFNQYKVYRPMLNLKKTEILAYQYANQIPYYEDMSN 183
Query: 265 RSPLFVRNRIRMSL 278
+ +VRN IR +
Sbjct: 184 QDRKYVRNDIRQRI 197
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 237,445,029
Number of Sequences: 539616
Number of extensions: 9941061
Number of successful extensions: 22435
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 274
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 21674
Number of HSP's gapped (non-prelim): 425
length of query: 662
length of database: 191,569,459
effective HSP length: 124
effective length of query: 538
effective length of database: 124,657,075
effective search space: 67065506350
effective search space used: 67065506350
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)