Query 006091
Match_columns 662
No_of_seqs 209 out of 3349
Neff 7.9
Searched_HMMs 46136
Date Thu Mar 28 18:12:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006091.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006091hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02939 transferase, transfer 100.0 2.3E-65 4.9E-70 582.2 50.8 488 147-658 477-971 (977)
2 PRK14099 glycogen synthase; Pr 100.0 4.8E-63 1E-67 551.1 48.4 478 150-657 2-482 (485)
3 PRK14098 glycogen synthase; Pr 100.0 7.9E-63 1.7E-67 549.9 48.4 482 148-656 2-488 (489)
4 TIGR02095 glgA glycogen/starch 100.0 5.1E-61 1.1E-65 536.7 47.7 472 152-654 1-473 (473)
5 PRK00654 glgA glycogen synthas 100.0 5.5E-60 1.2E-64 526.8 46.4 463 152-656 1-465 (466)
6 cd03791 GT1_Glycogen_synthase_ 100.0 6.5E-57 1.4E-61 504.1 47.3 475 153-652 1-475 (476)
7 PLN02316 synthase/transferase 100.0 2.5E-56 5.4E-61 517.5 52.4 442 148-655 584-1035(1036)
8 COG0297 GlgA Glycogen synthase 100.0 2.5E-56 5.4E-61 486.0 42.7 483 152-660 1-484 (487)
9 PLN02871 UDP-sulfoquinovose:DA 100.0 5.5E-39 1.2E-43 358.2 41.0 379 149-656 56-437 (465)
10 TIGR02472 sucr_P_syn_N sucrose 100.0 1E-38 2.2E-43 353.5 41.3 407 152-652 1-439 (439)
11 TIGR03449 mycothiol_MshA UDP-N 100.0 1.7E-38 3.8E-43 347.7 39.8 387 154-656 1-404 (405)
12 PRK10307 putative glycosyl tra 100.0 2.6E-38 5.5E-43 347.5 40.4 394 152-657 1-411 (412)
13 TIGR02149 glgA_Coryne glycogen 100.0 1.9E-38 4.2E-43 344.7 39.0 372 152-655 1-388 (388)
14 TIGR02468 sucrsPsyn_pln sucros 100.0 3.1E-38 6.7E-43 365.8 42.5 455 147-658 165-675 (1050)
15 TIGR02470 sucr_synth sucrose s 100.0 2.4E-38 5.1E-43 360.6 40.4 436 150-651 254-745 (784)
16 TIGR02094 more_P_ylases alpha- 100.0 4.6E-38 1E-42 354.1 40.5 467 154-651 1-598 (601)
17 cd03796 GT1_PIG-A_like This fa 100.0 8.5E-38 1.8E-42 341.9 39.3 365 153-658 1-372 (398)
18 cd04962 GT1_like_5 This family 100.0 5.4E-37 1.2E-41 330.7 37.9 367 152-654 1-371 (371)
19 PLN00142 sucrose synthase 100.0 5.4E-37 1.2E-41 349.4 35.3 434 151-651 279-768 (815)
20 TIGR03088 stp2 sugar transfera 100.0 1.6E-35 3.4E-40 320.7 37.1 363 152-655 2-374 (374)
21 cd03818 GT1_ExpC_like This fam 100.0 1.1E-35 2.4E-40 325.0 35.1 378 153-649 1-396 (396)
22 PRK15427 colanic acid biosynth 100.0 1.6E-35 3.5E-40 324.3 35.2 276 290-653 118-405 (406)
23 PRK15484 lipopolysaccharide 1, 100.0 3E-35 6.5E-40 319.7 37.1 359 152-655 3-379 (380)
24 cd03800 GT1_Sucrose_synthase T 100.0 2.3E-34 4.9E-39 312.8 34.7 381 153-648 1-397 (398)
25 PRK10125 putative glycosyl tra 100.0 1.4E-34 3.1E-39 316.1 33.1 378 152-654 1-405 (405)
26 cd03805 GT1_ALG2_like This fam 100.0 1E-34 2.2E-39 315.9 30.8 373 152-647 1-392 (392)
27 cd03792 GT1_Trehalose_phosphor 100.0 5.1E-34 1.1E-38 309.1 32.7 358 153-654 1-372 (372)
28 cd03802 GT1_AviGT4_like This f 100.0 1.9E-33 4.1E-38 298.3 36.4 328 152-652 1-335 (335)
29 cd04955 GT1_like_6 This family 100.0 4.5E-33 9.9E-38 298.5 37.4 355 153-652 1-363 (363)
30 cd03819 GT1_WavL_like This fam 100.0 2.1E-33 4.5E-38 300.5 33.9 339 166-643 8-355 (355)
31 cd04951 GT1_WbdM_like This fam 100.0 1.4E-32 3E-37 294.2 36.5 355 153-652 1-359 (360)
32 PLN02846 digalactosyldiacylgly 100.0 2.8E-33 6E-38 305.5 31.4 381 150-653 3-391 (462)
33 cd03825 GT1_wcfI_like This fam 100.0 6.1E-33 1.3E-37 297.5 33.1 355 152-654 1-365 (365)
34 cd04299 GT1_Glycogen_Phosphory 100.0 4.7E-32 1E-36 310.1 39.6 465 153-653 87-690 (778)
35 cd03814 GT1_like_2 This family 100.0 2.1E-32 4.4E-37 291.7 34.5 360 153-652 1-364 (364)
36 PRK15179 Vi polysaccharide bio 100.0 3.6E-32 7.9E-37 310.6 38.2 286 290-652 400-692 (694)
37 cd03807 GT1_WbnK_like This fam 100.0 3.6E-32 7.9E-37 288.5 35.5 359 153-652 1-365 (365)
38 PRK09922 UDP-D-galactose:(gluc 100.0 5.2E-33 1.1E-37 299.9 29.2 349 152-656 1-358 (359)
39 KOG1111 N-acetylglucosaminyltr 100.0 4.1E-33 8.9E-38 281.6 24.9 368 152-659 1-372 (426)
40 cd03813 GT1_like_3 This family 100.0 6.6E-33 1.4E-37 309.9 28.8 422 153-652 1-475 (475)
41 cd03812 GT1_CapH_like This fam 100.0 3.8E-32 8.2E-37 291.0 33.1 348 153-642 1-351 (358)
42 cd05844 GT1_like_7 Glycosyltra 100.0 2.9E-32 6.2E-37 293.4 32.3 272 290-650 82-367 (367)
43 cd03823 GT1_ExpE7_like This fa 100.0 5.1E-32 1.1E-36 287.8 32.6 357 153-652 1-358 (359)
44 cd03821 GT1_Bme6_like This fam 100.0 9.4E-32 2E-36 286.4 34.4 367 153-649 1-375 (375)
45 cd03809 GT1_mtfB_like This fam 100.0 4.2E-32 9.2E-37 289.8 30.9 359 153-648 1-364 (365)
46 cd03795 GT1_like_4 This family 100.0 3.3E-31 7.1E-36 283.2 37.6 350 153-644 1-357 (357)
47 cd03794 GT1_wbuB_like This fam 100.0 1.7E-31 3.8E-36 285.5 35.4 382 153-648 1-394 (394)
48 PRK15490 Vi polysaccharide bio 100.0 1.5E-31 3.3E-36 292.7 34.4 227 386-653 342-575 (578)
49 cd03817 GT1_UGDG_like This fam 100.0 1.9E-31 4.1E-36 284.4 33.9 364 153-653 1-373 (374)
50 cd03799 GT1_amsK_like This is 100.0 5.1E-31 1.1E-35 281.5 35.7 342 153-646 1-354 (355)
51 cd03822 GT1_ecORF704_like This 100.0 1.1E-30 2.4E-35 278.9 37.3 351 153-652 1-366 (366)
52 cd03808 GT1_cap1E_like This fa 100.0 1.3E-30 2.9E-35 275.4 37.0 353 153-648 1-358 (359)
53 cd03801 GT1_YqgM_like This fam 100.0 1.7E-30 3.7E-35 274.6 36.3 366 153-652 1-374 (374)
54 cd03820 GT1_amsD_like This fam 100.0 1.8E-30 4E-35 273.1 35.1 341 153-648 1-347 (348)
55 cd03816 GT1_ALG1_like This fam 100.0 4.9E-30 1.1E-34 282.1 35.1 372 151-647 3-410 (415)
56 cd03798 GT1_wlbH_like This fam 100.0 5.3E-29 1.1E-33 264.3 37.2 369 154-654 1-377 (377)
57 PLN02949 transferase, transfer 100.0 2.8E-29 6.1E-34 277.6 32.9 232 375-657 213-460 (463)
58 cd03806 GT1_ALG11_like This fa 100.0 4E-29 8.7E-34 274.9 33.8 384 162-645 7-418 (419)
59 TIGR03087 stp1 sugar transfera 100.0 2.7E-30 5.9E-35 282.6 24.4 223 373-652 163-395 (397)
60 cd03811 GT1_WabH_like This fam 100.0 3.1E-28 6.7E-33 256.4 31.5 340 153-633 1-343 (353)
61 cd03793 GT1_Glycogen_synthase_ 100.0 2.4E-28 5.1E-33 267.7 25.6 440 166-656 14-589 (590)
62 cd03804 GT1_wbaZ_like This fam 100.0 6.6E-28 1.4E-32 258.8 27.5 206 373-647 144-350 (351)
63 PLN02501 digalactosyldiacylgly 100.0 1.1E-26 2.5E-31 256.5 35.3 374 151-651 322-707 (794)
64 TIGR02918 accessory Sec system 100.0 2.7E-27 5.8E-32 264.3 29.7 220 380-654 268-500 (500)
65 PLN02275 transferase, transfer 100.0 7.5E-27 1.6E-31 253.1 31.8 325 168-615 15-370 (371)
66 PF08323 Glyco_transf_5: Starc 100.0 3.1E-29 6.7E-34 255.4 12.4 241 153-410 1-243 (245)
67 cd04946 GT1_AmsK_like This fam 100.0 7.3E-27 1.6E-31 256.3 29.4 220 375-648 176-406 (407)
68 PHA01633 putative glycosyl tra 100.0 2.8E-26 6.1E-31 241.7 31.4 234 377-649 87-335 (335)
69 PHA01630 putative group 1 glyc 100.0 8.2E-27 1.8E-31 247.9 25.4 218 376-653 87-330 (331)
70 PRK00726 murG undecaprenyldiph 99.9 1.1E-24 2.4E-29 234.7 30.1 343 151-652 1-356 (357)
71 cd04949 GT1_gtfA_like This fam 99.9 2.2E-25 4.7E-30 241.2 24.6 213 380-647 155-372 (372)
72 cd03788 GT1_TPS Trehalose-6-Ph 99.9 1.2E-24 2.6E-29 241.7 25.3 293 290-650 131-458 (460)
73 TIGR02400 trehalose_OtsA alpha 99.9 7.5E-24 1.6E-28 233.8 29.4 291 291-651 128-454 (456)
74 TIGR01133 murG undecaprenyldip 99.9 2.8E-23 6E-28 222.6 28.6 323 152-634 1-333 (348)
75 cd03785 GT1_MurG MurG is an N- 99.9 4.8E-23 1E-27 221.0 29.6 331 153-644 1-348 (350)
76 PLN03063 alpha,alpha-trehalose 99.9 3.3E-22 7.1E-27 233.7 27.4 297 291-656 148-480 (797)
77 PRK13609 diacylglycerol glucos 99.9 1.1E-20 2.5E-25 205.4 31.1 219 381-654 146-372 (380)
78 PRK05749 3-deoxy-D-manno-octul 99.9 1.1E-20 2.5E-25 208.5 27.4 236 374-656 170-422 (425)
79 PRK14501 putative bifunctional 99.9 5.1E-21 1.1E-25 223.9 24.3 297 290-656 133-465 (726)
80 cd04950 GT1_like_1 Glycosyltra 99.9 6.8E-20 1.5E-24 198.9 30.5 222 374-653 145-371 (373)
81 PF00534 Glycos_transf_1: Glyc 99.9 2.1E-20 4.6E-25 179.7 18.6 164 453-634 2-170 (172)
82 PLN02605 monogalactosyldiacylg 99.9 1.6E-19 3.4E-24 196.7 26.5 214 381-650 149-378 (382)
83 KOG0853 Glycosyltransferase [C 99.8 5E-19 1.1E-23 191.0 24.9 239 381-656 208-470 (495)
84 TIGR02398 gluc_glyc_Psyn gluco 99.8 1E-18 2.2E-23 192.3 26.9 293 291-651 133-480 (487)
85 PRK13608 diacylglycerol glucos 99.8 1.1E-18 2.4E-23 190.5 26.7 220 381-656 146-374 (391)
86 cd01635 Glycosyltransferase_GT 99.8 1.2E-18 2.5E-23 173.1 23.0 117 473-600 109-229 (229)
87 PRK00025 lpxB lipid-A-disaccha 99.8 8E-17 1.7E-21 175.1 24.9 221 379-655 131-375 (380)
88 PLN03064 alpha,alpha-trehalose 99.8 1.1E-16 2.4E-21 186.6 26.4 292 291-655 232-563 (934)
89 PRK09814 beta-1,6-galactofuran 99.8 4.7E-16 1E-20 166.2 28.1 184 374-633 115-309 (333)
90 KOG1387 Glycosyltransferase [C 99.7 2E-15 4.3E-20 152.7 25.4 227 381-658 221-463 (465)
91 COG0438 RfaG Glycosyltransfera 99.7 1.5E-15 3.2E-20 158.4 25.5 220 382-656 150-379 (381)
92 cd03786 GT1_UDP-GlcNAc_2-Epime 99.7 4E-16 8.7E-21 168.2 21.6 215 380-649 139-360 (363)
93 TIGR00236 wecB UDP-N-acetylglu 99.7 1.6E-15 3.5E-20 164.1 23.2 214 382-649 141-363 (365)
94 PF05693 Glycogen_syn: Glycoge 99.6 8.8E-15 1.9E-19 160.2 20.6 442 166-656 9-584 (633)
95 KOG2941 Beta-1,4-mannosyltrans 99.6 6.2E-12 1.4E-16 127.8 29.2 384 170-649 25-437 (444)
96 PF13692 Glyco_trans_1_4: Glyc 99.5 4.2E-14 9E-19 130.2 9.4 129 468-617 2-134 (135)
97 TIGR00215 lpxB lipid-A-disacch 99.5 2.7E-12 5.8E-17 139.9 24.4 207 377-632 133-361 (385)
98 PRK10117 trehalose-6-phosphate 99.5 9.7E-12 2.1E-16 136.0 24.4 296 291-655 124-455 (474)
99 PF00982 Glyco_transf_20: Glyc 99.4 1.3E-11 2.8E-16 136.6 23.9 291 290-651 141-472 (474)
100 PF13439 Glyco_transf_4: Glyco 99.4 1.5E-12 3.1E-17 124.3 12.6 176 154-429 1-176 (177)
101 TIGR03713 acc_sec_asp1 accesso 99.4 1.7E-11 3.7E-16 137.5 20.3 163 468-651 319-519 (519)
102 PF13579 Glyco_trans_4_4: Glyc 99.4 1.6E-12 3.4E-17 121.9 10.2 160 168-423 1-160 (160)
103 COG0380 OtsA Trehalose-6-phosp 99.4 1.7E-10 3.6E-15 125.8 26.4 295 291-653 148-479 (486)
104 PLN02205 alpha,alpha-trehalose 99.3 1.3E-10 2.7E-15 136.9 24.7 300 292-655 203-553 (854)
105 PRK12446 undecaprenyldiphospho 99.2 3.3E-08 7.3E-13 106.4 30.3 185 414-652 153-350 (352)
106 COG0058 GlgP Glucan phosphoryl 99.1 8.4E-10 1.8E-14 124.9 17.2 417 167-602 114-630 (750)
107 PF13524 Glyco_trans_1_2: Glyc 99.1 3E-10 6.5E-15 97.6 9.4 89 545-649 1-92 (92)
108 PF09314 DUF1972: Domain of un 99.1 3.4E-09 7.3E-14 102.2 15.6 183 152-425 2-185 (185)
109 COG0707 MurG UDP-N-acetylgluco 99.1 2.9E-07 6.3E-12 98.7 30.9 331 167-652 10-352 (357)
110 PRK14986 glycogen phosphorylas 99.1 7.4E-08 1.6E-12 110.7 27.8 299 290-600 313-693 (815)
111 TIGR02919 accessory Sec system 98.9 1.6E-08 3.5E-13 111.1 16.4 178 381-629 238-418 (438)
112 TIGR02093 P_ylase glycogen/sta 98.9 1.7E-07 3.7E-12 107.5 22.6 290 290-583 297-668 (794)
113 PRK14985 maltodextrin phosphor 98.9 2.7E-07 5.9E-12 105.7 23.2 298 290-600 302-679 (798)
114 cd04300 GT1_Glycogen_Phosphory 98.7 2.6E-07 5.6E-12 106.4 17.8 297 290-600 300-680 (797)
115 PF13477 Glyco_trans_4_2: Glyc 98.7 3E-07 6.6E-12 84.9 13.3 108 153-330 1-109 (139)
116 PF13528 Glyco_trans_1_3: Glyc 98.5 7.9E-06 1.7E-10 86.5 19.1 116 467-614 192-316 (318)
117 PF00343 Phosphorylase: Carboh 98.5 5.6E-06 1.2E-10 94.2 18.3 299 290-600 214-594 (713)
118 cd03784 GT1_Gtf_like This fami 98.5 2E-05 4.4E-10 86.3 22.3 123 467-617 239-371 (401)
119 TIGR03492 conserved hypothetic 98.4 0.00014 3.1E-09 79.6 27.7 149 466-631 203-373 (396)
120 TIGR03590 PseG pseudaminic aci 98.4 0.0001 2.3E-09 76.8 25.4 97 468-574 171-268 (279)
121 KOG3742 Glycogen synthase [Car 98.4 1.9E-06 4.1E-11 90.7 11.4 107 538-654 496-613 (692)
122 TIGR01426 MGT glycosyltransfer 98.4 0.00015 3.3E-09 79.2 26.5 154 469-650 227-389 (392)
123 TIGR03568 NeuC_NnaA UDP-N-acet 98.3 8.6E-05 1.9E-09 80.5 23.0 213 381-650 143-364 (365)
124 PF04007 DUF354: Protein of un 98.3 9.3E-05 2E-09 78.6 21.6 132 454-616 168-308 (335)
125 PF02350 Epimerase_2: UDP-N-ac 98.1 0.00012 2.7E-09 78.6 18.4 268 290-651 67-345 (346)
126 COG1519 KdtA 3-deoxy-D-manno-o 98.1 0.0029 6.3E-08 67.9 27.8 229 372-652 167-416 (419)
127 COG0763 LpxB Lipid A disacchar 97.9 0.00043 9.3E-09 73.3 17.7 110 453-572 175-289 (381)
128 PF02684 LpxB: Lipid-A-disacch 97.9 0.0013 2.8E-08 70.9 20.3 145 454-617 173-339 (373)
129 PRK01021 lpxB lipid-A-disaccha 97.8 0.0031 6.6E-08 71.3 21.6 108 453-572 400-513 (608)
130 TIGR00661 MJ1255 conserved hyp 97.7 0.0067 1.5E-07 64.5 22.7 114 469-613 190-309 (321)
131 PF13844 Glyco_transf_41: Glyc 97.6 0.0022 4.8E-08 70.7 17.1 179 456-655 275-468 (468)
132 COG1819 Glycosyl transferases, 97.5 0.007 1.5E-07 66.6 20.2 154 469-652 239-400 (406)
133 COG1817 Uncharacterized protei 97.5 0.021 4.4E-07 58.9 21.5 134 454-616 170-312 (346)
134 PF00862 Sucrose_synth: Sucros 97.5 0.00091 2E-08 72.9 12.2 181 152-390 273-476 (550)
135 COG3914 Spy Predicted O-linked 97.5 0.074 1.6E-06 59.1 26.5 179 457-657 421-617 (620)
136 PF12000 Glyco_trans_4_3: Gkyc 97.5 0.0013 2.8E-08 62.9 11.4 150 234-429 19-170 (171)
137 COG4641 Uncharacterized protei 97.3 0.027 5.9E-07 59.6 20.1 192 414-655 160-363 (373)
138 COG0381 WecB UDP-N-acetylgluco 97.3 0.04 8.6E-07 58.9 20.9 219 381-652 144-369 (383)
139 COG4671 Predicted glycosyl tra 97.2 0.38 8.2E-06 50.7 27.6 138 467-617 219-364 (400)
140 PRK02797 4-alpha-L-fucosyltran 97.0 0.32 7E-06 50.6 23.7 164 469-658 146-321 (322)
141 PRK14089 ipid-A-disaccharide s 97.0 0.051 1.1E-06 58.3 18.6 90 469-572 168-260 (347)
142 KOG1050 Trehalose-6-phosphate 96.9 0.039 8.5E-07 64.3 18.0 205 414-646 238-470 (732)
143 PRK10017 colanic acid biosynth 96.8 1.2 2.6E-05 49.3 30.5 128 484-629 260-399 (426)
144 PF11997 DUF3492: Domain of un 96.6 0.0012 2.5E-08 68.3 2.4 68 152-222 1-68 (268)
145 PF07429 Glyco_transf_56: 4-al 95.8 3 6.5E-05 44.2 22.7 114 469-583 185-306 (360)
146 PHA03392 egt ecdysteroid UDP-g 95.1 0.81 1.8E-05 51.9 17.1 130 468-629 297-439 (507)
147 PF04464 Glyphos_transf: CDP-G 94.8 0.59 1.3E-05 50.6 14.5 194 378-618 130-336 (369)
148 PLN02448 UDP-glycosyltransfera 93.5 1.3 2.8E-05 49.7 14.2 127 468-617 275-414 (459)
149 PF06258 Mito_fiss_Elm1: Mitoc 92.9 8 0.00017 41.0 18.3 117 454-576 135-259 (311)
150 PLN03004 UDP-glycosyltransfera 91.9 1.9 4.2E-05 48.1 12.8 131 467-617 270-423 (451)
151 PLN02210 UDP-glucosyl transfer 91.3 2.7 5.8E-05 47.1 13.0 133 468-617 270-414 (456)
152 PF11440 AGT: DNA alpha-glucos 91.1 20 0.00044 36.9 24.9 158 455-617 169-352 (355)
153 PLN02670 transferase, transfer 91.0 4.2 9.2E-05 45.6 14.3 162 468-654 279-466 (472)
154 PLN02863 UDP-glucoronosyl/UDP- 91.0 4.9 0.00011 45.3 14.8 40 150-195 8-47 (477)
155 PLN02562 UDP-glycosyltransfera 91.0 2.2 4.7E-05 47.7 12.0 129 468-617 274-412 (448)
156 TIGR02195 heptsyl_trn_II lipop 90.8 3.5 7.6E-05 43.8 13.1 111 453-572 161-276 (334)
157 PLN02173 UDP-glucosyl transfer 90.6 4.8 0.0001 44.9 14.2 128 469-617 266-407 (449)
158 PLN02554 UDP-glycosyltransfera 89.7 7.1 0.00015 44.0 14.8 125 469-617 276-439 (481)
159 PLN03007 UDP-glucosyltransfera 89.5 6.6 0.00014 44.3 14.4 39 150-194 4-42 (482)
160 COG3980 spsG Spore coat polysa 89.2 2.6 5.6E-05 43.3 9.5 90 470-571 161-251 (318)
161 TIGR02193 heptsyl_trn_I lipopo 89.1 6.6 0.00014 41.4 13.4 99 467-573 179-280 (319)
162 PLN02410 UDP-glucoronosyl/UDP- 88.2 7.9 0.00017 43.3 13.7 128 468-617 265-409 (451)
163 PLN02167 UDP-glycosyltransfera 88.0 9.1 0.0002 43.1 14.1 126 468-617 281-433 (475)
164 COG3660 Predicted nucleoside-d 87.9 35 0.00075 35.0 22.0 103 466-574 160-273 (329)
165 PRK10422 lipopolysaccharide co 87.8 22 0.00048 38.1 16.6 101 467-572 183-287 (352)
166 PLN02207 UDP-glycosyltransfera 87.7 11 0.00024 42.3 14.4 128 468-617 276-425 (468)
167 PF01075 Glyco_transf_9: Glyco 87.5 4.8 0.0001 40.6 10.7 101 467-572 105-208 (247)
168 TIGR03609 S_layer_CsaB polysac 87.5 18 0.00038 37.8 15.3 98 468-572 172-275 (298)
169 PLN00164 glucosyltransferase; 87.0 10 0.00023 42.7 13.9 69 538-617 351-430 (480)
170 PF08288 PIGA: PIGA (GPI ancho 86.0 2.5 5.5E-05 35.6 6.1 35 290-330 50-85 (90)
171 PLN02555 limonoid glucosyltran 85.9 15 0.00033 41.3 14.4 125 469-617 279-428 (480)
172 PF04101 Glyco_tran_28_C: Glyc 85.9 0.43 9.3E-06 45.3 1.8 79 536-632 66-154 (167)
173 PLN02208 glycosyltransferase f 85.4 16 0.00035 40.7 14.2 68 538-617 323-400 (442)
174 PF00201 UDPGT: UDP-glucoronos 84.6 6.2 0.00013 44.5 10.8 131 468-629 277-416 (500)
175 PLN02152 indole-3-acetate beta 84.6 13 0.00028 41.7 12.9 141 455-617 250-416 (455)
176 PRK10964 ADP-heptose:LPS hepto 84.5 14 0.0003 39.1 12.8 97 469-573 180-279 (322)
177 PF05159 Capsule_synth: Capsul 84.0 8.7 0.00019 39.6 10.7 101 466-575 115-227 (269)
178 PF12038 DUF3524: Domain of un 83.9 12 0.00027 35.5 10.4 34 152-194 1-35 (168)
179 cd03789 GT1_LPS_heptosyltransf 81.7 9.1 0.0002 39.5 9.9 97 470-573 124-224 (279)
180 PLN02992 coniferyl-alcohol glu 81.1 24 0.00052 39.8 13.4 68 538-617 350-426 (481)
181 PF01975 SurE: Survival protei 80.0 2 4.3E-05 42.3 3.9 39 152-197 1-39 (196)
182 KOG0780 Signal recognition par 78.4 57 0.0012 35.3 14.1 169 470-652 156-341 (483)
183 TIGR02201 heptsyl_trn_III lipo 77.9 32 0.0007 36.6 12.9 100 468-572 182-285 (344)
184 PF15024 Glyco_transf_18: Glyc 77.7 18 0.00039 40.9 10.8 159 468-652 277-454 (559)
185 PF10087 DUF2325: Uncharacteri 77.5 7.1 0.00015 33.6 6.2 81 500-581 2-90 (97)
186 COG0859 RfaF ADP-heptose:LPS h 76.7 16 0.00036 38.9 10.1 97 468-572 176-276 (334)
187 PRK10916 ADP-heptose:LPS hepto 76.7 29 0.00063 37.1 12.1 109 455-572 169-286 (348)
188 PLN02764 glycosyltransferase f 76.2 54 0.0012 36.7 14.2 69 538-617 329-406 (453)
189 PF01113 DapB_N: Dihydrodipico 75.7 4.6 0.0001 36.5 4.7 47 535-581 60-106 (124)
190 PF02951 GSH-S_N: Prokaryotic 75.2 3.9 8.5E-05 36.8 4.0 40 152-194 1-40 (119)
191 PF06925 MGDG_synth: Monogalac 71.0 21 0.00046 33.9 8.3 30 381-420 136-165 (169)
192 PRK00207 sulfur transfer compl 69.5 8.5 0.00018 35.1 4.9 38 152-192 1-39 (128)
193 PHA03392 egt ecdysteroid UDP-g 68.8 5.5 0.00012 45.3 4.3 38 152-194 21-58 (507)
194 PLN02534 UDP-glycosyltransfera 68.3 1.1E+02 0.0024 34.7 14.5 39 151-195 8-46 (491)
195 PLN00414 glycosyltransferase f 68.2 58 0.0013 36.4 12.2 69 538-617 324-401 (446)
196 PF03033 Glyco_transf_28: Glyc 67.3 7.4 0.00016 35.3 4.1 28 167-194 8-35 (139)
197 PLN03015 UDP-glucosyl transfer 65.1 1.2E+02 0.0025 34.2 13.8 68 538-617 347-425 (470)
198 PRK10037 cell division protein 64.8 7.5 0.00016 39.6 4.0 36 152-193 1-38 (250)
199 COG2327 WcaK Polysaccharide py 63.7 1.2E+02 0.0027 32.9 13.0 78 534-628 277-357 (385)
200 PF03358 FMN_red: NADPH-depend 62.0 12 0.00025 34.7 4.5 40 152-194 1-40 (152)
201 PF06564 YhjQ: YhjQ protein; 62.0 9.4 0.0002 38.8 4.0 36 152-193 1-38 (243)
202 PF02374 ArsA_ATPase: Anion-tr 60.3 11 0.00024 39.8 4.4 37 152-195 1-39 (305)
203 PLN00016 RNA-binding protein; 57.9 10 0.00022 41.2 3.7 42 147-194 48-89 (378)
204 PF03016 Exostosin: Exostosin 57.5 14 0.0003 38.4 4.6 67 536-612 230-299 (302)
205 PF04413 Glycos_transf_N: 3-De 55.6 71 0.0015 31.0 8.9 39 374-422 141-179 (186)
206 PF03401 TctC: Tripartite tric 55.2 1.2E+02 0.0025 31.5 10.9 156 468-633 78-243 (274)
207 COG2910 Putative NADH-flavin r 55.1 16 0.00034 35.5 4.0 34 152-195 1-34 (211)
208 CHL00072 chlL photochlorophyll 54.8 13 0.00028 38.9 3.8 35 152-194 1-37 (290)
209 CHL00175 minD septum-site dete 53.3 24 0.00053 36.4 5.6 47 142-194 5-53 (281)
210 PRK13932 stationary phase surv 53.2 20 0.00043 36.8 4.7 41 149-197 3-43 (257)
211 PRK10840 transcriptional regul 51.8 2.2E+02 0.0049 27.6 12.1 110 497-617 3-125 (216)
212 PRK10360 DNA-binding transcrip 51.3 2E+02 0.0042 27.0 11.3 66 542-617 47-117 (196)
213 PRK13236 nitrogenase reductase 50.7 20 0.00044 37.6 4.5 40 148-194 2-43 (296)
214 PRK13849 putative crown gall t 50.6 21 0.00045 36.1 4.3 37 152-194 1-39 (231)
215 TIGR01281 DPOR_bchL light-inde 50.4 17 0.00038 37.2 3.9 35 152-194 1-37 (268)
216 PF08660 Alg14: Oligosaccharid 50.4 61 0.0013 31.0 7.3 28 167-194 7-36 (170)
217 TIGR01915 npdG NADPH-dependent 50.2 19 0.00041 35.9 4.0 32 152-193 1-32 (219)
218 TIGR00959 ffh signal recogniti 49.2 2.2E+02 0.0048 31.6 12.4 86 555-651 255-340 (428)
219 COG4635 HemG Flavodoxin [Energ 48.8 27 0.00058 33.0 4.3 37 152-193 1-37 (175)
220 COG4088 Predicted nucleotide k 48.6 16 0.00034 36.2 2.9 41 152-197 1-41 (261)
221 PRK09271 flavodoxin; Provision 48.0 30 0.00065 32.6 4.8 36 152-192 1-36 (160)
222 cd02040 NifH NifH gene encodes 47.9 20 0.00044 36.6 3.9 28 167-194 9-38 (270)
223 TIGR03371 cellulose_yhjQ cellu 46.9 23 0.0005 35.6 4.1 37 152-194 1-39 (246)
224 PRK13869 plasmid-partitioning 46.5 25 0.00055 38.7 4.6 38 150-193 119-158 (405)
225 PLN02572 UDP-sulfoquinovose sy 46.2 36 0.00078 37.9 5.8 35 148-192 44-78 (442)
226 PRK06756 flavodoxin; Provision 46.1 34 0.00074 31.6 4.8 38 151-193 1-38 (148)
227 TIGR03453 partition_RepA plasm 45.7 28 0.0006 38.0 4.8 39 150-194 102-142 (387)
228 cd02032 Bchl_like This family 45.3 23 0.0005 36.3 3.9 35 152-194 1-37 (267)
229 KOG2099 Glycogen phosphorylase 45.3 55 0.0012 37.0 6.7 129 455-583 550-704 (843)
230 PRK10867 signal recognition pa 44.8 3.1E+02 0.0068 30.5 12.7 86 555-651 256-341 (433)
231 PRK02122 glucosamine-6-phospha 42.5 45 0.00097 39.1 6.0 40 149-194 367-406 (652)
232 PRK13232 nifH nitrogenase redu 41.5 29 0.00062 35.8 3.9 28 167-194 9-38 (273)
233 COG0003 ArsA Predicted ATPase 41.3 40 0.00087 35.9 4.9 38 151-195 1-40 (322)
234 COG0716 FldA Flavodoxins [Ener 41.2 36 0.00078 31.7 4.1 37 151-192 1-37 (151)
235 PF03808 Glyco_tran_WecB: Glyc 41.2 1.9E+02 0.0042 27.5 9.3 100 480-582 31-141 (172)
236 PRK08305 spoVFB dipicolinate s 40.9 43 0.00094 32.9 4.7 36 151-194 5-42 (196)
237 TIGR01425 SRP54_euk signal rec 40.8 2.9E+02 0.0063 30.7 11.6 97 544-651 242-340 (429)
238 COG1192 Soj ATPases involved i 40.6 37 0.0008 34.5 4.5 37 152-194 2-41 (259)
239 PRK13235 nifH nitrogenase redu 40.3 33 0.00072 35.3 4.1 28 167-194 9-38 (274)
240 PF02441 Flavoprotein: Flavopr 39.8 39 0.00084 30.5 4.0 36 152-194 1-36 (129)
241 TIGR00696 wecB_tagA_cpsF bacte 39.6 1.6E+02 0.0035 28.4 8.4 98 482-582 33-140 (177)
242 PRK09739 hypothetical protein; 39.3 53 0.0011 32.1 5.2 41 151-194 3-43 (199)
243 PRK00771 signal recognition pa 39.2 3.3E+02 0.0072 30.3 11.9 97 544-651 235-333 (437)
244 PRK06249 2-dehydropantoate 2-r 39.1 37 0.0008 35.8 4.3 34 150-194 4-37 (313)
245 TIGR00087 surE 5'/3'-nucleotid 39.0 37 0.0008 34.6 4.1 38 152-197 1-38 (244)
246 PHA02519 plasmid partition pro 38.8 39 0.00085 36.9 4.5 38 150-193 104-143 (387)
247 COG0569 TrkA K+ transport syst 38.6 34 0.00073 34.4 3.7 26 169-194 7-32 (225)
248 TIGR01380 glut_syn glutathione 38.0 29 0.00063 36.7 3.3 40 152-194 1-40 (312)
249 TIGR00639 PurN phosphoribosylg 38.0 1.4E+02 0.0031 29.1 7.9 34 152-194 1-36 (190)
250 PRK03692 putative UDP-N-acetyl 37.7 2.7E+02 0.0058 28.4 10.0 98 482-582 90-197 (243)
251 PRK13185 chlL protochlorophyll 37.6 39 0.00084 34.6 4.1 28 167-194 10-39 (270)
252 cd06533 Glyco_transf_WecG_TagA 37.2 3.1E+02 0.0066 26.1 10.0 100 479-581 28-138 (171)
253 PRK10818 cell division inhibit 37.0 43 0.00094 34.2 4.4 37 152-194 2-40 (270)
254 TIGR01007 eps_fam capsular exo 37.0 53 0.0012 32.0 4.8 39 152-194 17-55 (204)
255 PRK13230 nitrogenase reductase 36.5 39 0.00086 34.9 4.0 28 167-194 9-38 (279)
256 TIGR03837 efp_adjacent_2 conse 36.2 2.7E+02 0.0059 30.1 10.0 114 451-574 165-288 (371)
257 PF09140 MipZ: ATPase MipZ; I 36.2 42 0.00092 34.2 3.9 28 167-194 9-38 (261)
258 PRK00211 sulfur relay protein 36.2 62 0.0013 29.0 4.6 39 152-194 2-41 (119)
259 COG0300 DltE Short-chain dehyd 35.2 53 0.0012 33.9 4.6 36 150-194 4-39 (265)
260 TIGR01754 flav_RNR ribonucleot 34.2 59 0.0013 29.7 4.3 34 152-190 1-34 (140)
261 PHA02518 ParA-like protein; Pr 34.2 45 0.00099 32.4 3.8 28 167-194 9-38 (211)
262 PRK06703 flavodoxin; Provision 34.1 69 0.0015 29.6 4.8 38 151-193 1-38 (151)
263 COG0512 PabA Anthranilate/para 34.1 49 0.0011 32.3 3.8 34 151-194 1-34 (191)
264 PRK13933 stationary phase surv 34.1 53 0.0012 33.7 4.3 37 152-196 1-37 (253)
265 PF00201 UDPGT: UDP-glucoronos 34.1 19 0.00041 40.6 1.2 27 169-195 11-37 (500)
266 PLN03209 translocon at the inn 33.8 56 0.0012 37.6 4.8 33 153-194 81-113 (576)
267 PRK00048 dihydrodipicolinate r 33.7 1.2E+02 0.0026 31.1 6.9 44 536-579 54-97 (257)
268 PRK13234 nifH nitrogenase redu 33.6 52 0.0011 34.4 4.4 37 151-194 3-41 (295)
269 TIGR00715 precor6x_red precorr 33.6 53 0.0011 33.8 4.2 32 152-194 1-32 (256)
270 PF01656 CbiA: CobQ/CobB/MinD/ 33.6 48 0.001 31.6 3.8 28 167-194 7-36 (195)
271 PRK05647 purN phosphoribosylgl 33.5 1.5E+02 0.0032 29.2 7.2 35 151-194 1-37 (200)
272 cd03146 GAT1_Peptidase_E Type 33.2 4.8E+02 0.01 25.6 11.7 106 471-576 3-124 (212)
273 PRK11104 hemG protoporphyrinog 33.0 52 0.0011 31.6 3.9 35 152-192 1-35 (177)
274 COG1553 DsrE Uncharacterized c 32.9 82 0.0018 28.5 4.7 38 152-192 1-39 (126)
275 KOG2884 26S proteasome regulat 32.8 3.9E+02 0.0085 26.7 9.6 117 468-617 108-228 (259)
276 PF02525 Flavodoxin_2: Flavodo 32.8 60 0.0013 31.6 4.4 38 152-192 1-40 (199)
277 PF01408 GFO_IDH_MocA: Oxidore 32.7 2.1E+02 0.0045 24.8 7.6 36 538-573 56-93 (120)
278 PRK00346 surE 5'(3')-nucleotid 32.3 60 0.0013 33.2 4.3 37 152-196 1-37 (250)
279 PF04230 PS_pyruv_trans: Polys 32.1 2.8E+02 0.006 27.4 9.4 37 532-573 247-283 (286)
280 PLN00141 Tic62-NAD(P)-related 31.8 69 0.0015 32.2 4.8 33 151-193 17-49 (251)
281 PRK13705 plasmid-partitioning 31.5 68 0.0015 35.1 4.9 37 150-192 104-142 (388)
282 COG1763 MobB Molybdopterin-gua 31.4 75 0.0016 30.2 4.5 38 151-193 1-38 (161)
283 TIGR01969 minD_arch cell divis 31.3 54 0.0012 32.8 4.0 28 167-194 9-38 (251)
284 PRK13934 stationary phase surv 31.3 63 0.0014 33.3 4.3 37 152-196 1-37 (266)
285 PLN02166 dTDP-glucose 4,6-dehy 31.2 54 0.0012 36.5 4.1 36 148-193 117-152 (436)
286 CHL00194 ycf39 Ycf39; Provisio 31.0 54 0.0012 34.5 4.0 27 168-194 7-33 (317)
287 PF10093 DUF2331: Uncharacteri 30.8 2.6E+02 0.0056 30.4 8.9 115 452-575 167-291 (374)
288 PF03446 NAD_binding_2: NAD bi 30.7 62 0.0013 30.5 4.0 31 151-192 1-31 (163)
289 PRK13935 stationary phase surv 30.7 65 0.0014 33.0 4.3 38 152-197 1-38 (253)
290 TIGR01968 minD_bact septum sit 30.6 60 0.0013 32.7 4.1 28 167-194 10-39 (261)
291 PRK05708 2-dehydropantoate 2-r 30.4 60 0.0013 34.1 4.2 33 151-194 2-34 (305)
292 cd03129 GAT1_Peptidase_E_like 30.4 5.3E+02 0.011 25.2 11.0 103 475-577 7-125 (210)
293 COG1927 Mtd Coenzyme F420-depe 30.3 3.4E+02 0.0074 26.9 8.7 99 471-601 7-115 (277)
294 TIGR03018 pepcterm_TyrKin exop 30.3 96 0.0021 30.4 5.4 41 150-194 33-74 (207)
295 PRK05246 glutathione synthetas 30.3 45 0.00098 35.3 3.2 41 151-194 1-41 (316)
296 PRK12921 2-dehydropantoate 2-r 30.1 55 0.0012 34.1 3.9 31 152-193 1-31 (305)
297 cd01020 TroA_b Metal binding p 30.0 2.1E+02 0.0045 29.3 8.0 82 538-633 48-130 (264)
298 PLN02778 3,5-epimerase/4-reduc 30.0 64 0.0014 33.7 4.3 36 146-191 4-39 (298)
299 TIGR03012 sulf_tusD_dsrE sulfu 29.6 96 0.0021 28.1 4.8 37 153-192 1-38 (127)
300 cd02037 MRP-like MRP (Multiple 29.3 59 0.0013 30.6 3.6 28 167-194 8-37 (169)
301 PRK11670 antiporter inner memb 29.1 72 0.0016 34.6 4.6 39 150-194 105-145 (369)
302 KOG1192 UDP-glucuronosyl and U 28.9 3.6E+02 0.0077 30.1 10.4 164 466-653 276-455 (496)
303 COG0496 SurE Predicted acid ph 28.3 66 0.0014 32.9 3.8 38 152-197 1-38 (252)
304 COG1922 WecG Teichoic acid bio 28.2 6.6E+02 0.014 25.8 10.9 101 480-583 91-202 (253)
305 PF10727 Rossmann-like: Rossma 28.0 40 0.00087 30.7 2.0 34 150-194 9-42 (127)
306 COG2894 MinD Septum formation 27.5 68 0.0015 32.2 3.5 36 153-194 3-40 (272)
307 PRK07454 short chain dehydroge 27.1 79 0.0017 31.3 4.2 34 151-193 5-38 (241)
308 TIGR00288 conserved hypothetic 26.7 2.4E+02 0.0051 26.8 7.0 65 482-550 90-156 (160)
309 cd02117 NifH_like This family 26.7 76 0.0016 31.2 4.0 26 168-193 9-36 (212)
310 PLN02695 GDP-D-mannose-3',5'-e 26.6 74 0.0016 34.4 4.2 34 150-193 20-53 (370)
311 PRK14619 NAD(P)H-dependent gly 26.5 85 0.0018 33.0 4.5 34 150-194 3-36 (308)
312 TIGR03029 EpsG chain length de 26.5 1.1E+02 0.0024 31.3 5.4 41 150-194 101-141 (274)
313 PF03808 Glyco_tran_WecB: Glyc 26.3 2.7E+02 0.0059 26.4 7.6 59 471-529 75-133 (172)
314 PRK05723 flavodoxin; Provision 26.3 96 0.0021 29.0 4.3 36 152-192 1-36 (151)
315 PRK06027 purU formyltetrahydro 26.1 1E+02 0.0022 32.3 4.8 39 148-195 86-126 (286)
316 PRK06849 hypothetical protein; 26.0 82 0.0018 34.2 4.4 35 150-194 3-37 (389)
317 PRK05920 aromatic acid decarbo 25.9 1E+02 0.0022 30.5 4.6 36 151-194 3-39 (204)
318 PRK13396 3-deoxy-7-phosphohept 25.9 8E+02 0.017 26.5 11.6 104 467-574 99-216 (352)
319 COG3980 spsG Spore coat polysa 25.7 94 0.002 32.3 4.3 41 152-194 1-41 (318)
320 PRK00170 azoreductase; Reviewe 25.6 1E+02 0.0022 29.8 4.6 40 151-193 1-43 (201)
321 PF09949 DUF2183: Uncharacteri 25.5 1.9E+02 0.0042 25.1 5.7 41 485-527 54-94 (100)
322 PRK13233 nifH nitrogenase redu 25.2 83 0.0018 32.3 4.1 27 167-193 10-39 (275)
323 PRK04020 rps2P 30S ribosomal p 25.1 6.8E+02 0.015 24.8 10.4 101 479-582 48-154 (204)
324 PRK06522 2-dehydropantoate 2-r 25.1 77 0.0017 32.9 3.9 32 152-194 1-32 (304)
325 PRK03767 NAD(P)H:quinone oxido 25.1 1E+02 0.0022 30.1 4.5 37 152-193 2-39 (200)
326 COG2085 Predicted dinucleotide 24.8 78 0.0017 31.4 3.5 29 168-196 7-35 (211)
327 PRK06924 short chain dehydroge 24.7 82 0.0018 31.4 3.9 33 152-193 1-33 (251)
328 PRK08229 2-dehydropantoate 2-r 24.7 81 0.0017 33.5 4.0 32 151-193 2-33 (341)
329 PRK10569 NAD(P)H-dependent FMN 24.5 1.3E+02 0.0027 29.4 4.9 38 152-193 1-39 (191)
330 PF13614 AAA_31: AAA domain; P 24.3 1.5E+02 0.0033 27.1 5.4 28 167-194 11-38 (157)
331 PF02635 DrsE: DsrE/DsrF-like 24.1 1.6E+02 0.0035 25.4 5.3 40 152-194 1-43 (122)
332 COG0299 PurN Folate-dependent 23.9 3.7E+02 0.008 26.4 7.8 30 290-328 79-108 (200)
333 PF03721 UDPG_MGDP_dh_N: UDP-g 23.9 70 0.0015 31.0 3.0 30 152-192 1-30 (185)
334 PRK09730 putative NAD(P)-bindi 23.7 85 0.0018 31.0 3.8 32 152-192 1-32 (247)
335 PF00205 TPP_enzyme_M: Thiamin 23.6 2E+02 0.0044 25.9 5.9 28 523-550 57-85 (137)
336 PRK07308 flavodoxin; Validated 23.0 1.3E+02 0.0027 27.7 4.5 26 167-192 12-37 (146)
337 PRK01372 ddl D-alanine--D-alan 23.0 1.2E+02 0.0026 31.6 4.8 42 151-194 4-45 (304)
338 PRK05693 short chain dehydroge 22.9 89 0.0019 31.8 3.8 34 152-194 1-34 (274)
339 cd06533 Glyco_transf_WecG_TagA 22.8 3.3E+02 0.0071 25.9 7.4 54 471-524 73-126 (171)
340 PF02606 LpxK: Tetraacyldisacc 22.7 89 0.0019 33.3 3.7 43 151-198 34-78 (326)
341 PRK14494 putative molybdopteri 22.7 1.3E+02 0.0028 30.3 4.8 37 152-193 1-37 (229)
342 KOG2452 Formyltetrahydrofolate 22.4 1.4E+02 0.003 32.8 5.0 32 152-194 1-32 (881)
343 TIGR03010 sulf_tusC_dsrF sulfu 22.0 1.5E+02 0.0032 26.3 4.5 39 153-194 1-39 (116)
344 cd02033 BchX Chlorophyllide re 21.9 1.8E+02 0.0039 31.1 5.9 40 150-194 29-68 (329)
345 PRK10538 malonic semialdehyde 21.9 1.1E+02 0.0023 30.6 4.1 25 167-194 9-33 (248)
346 PLN03007 UDP-glucosyltransfera 21.9 1.2E+02 0.0026 34.2 4.8 131 467-617 285-439 (482)
347 PRK10675 UDP-galactose-4-epime 21.8 95 0.0021 32.6 3.8 25 168-192 7-31 (338)
348 PLN02712 arogenate dehydrogena 21.6 1.3E+02 0.0029 35.4 5.2 44 139-193 40-83 (667)
349 PRK05568 flavodoxin; Provision 21.6 1.6E+02 0.0035 26.6 4.9 27 167-193 12-38 (142)
350 PRK13886 conjugal transfer pro 21.6 1.2E+02 0.0026 30.9 4.2 37 152-194 2-40 (241)
351 PLN02208 glycosyltransferase f 21.4 1.3E+02 0.0029 33.4 5.0 39 150-194 3-41 (442)
352 COG0655 WrbA Multimeric flavod 21.3 1.5E+02 0.0033 29.0 4.9 40 152-194 1-40 (207)
353 COG2204 AtoC Response regulato 21.3 1.2E+03 0.026 26.2 12.7 110 499-618 6-122 (464)
354 PRK09004 FMN-binding protein M 21.2 1.5E+02 0.0033 27.4 4.6 26 167-192 12-37 (146)
355 PRK10427 putative PTS system f 21.1 1.6E+02 0.0035 26.2 4.5 39 151-194 2-42 (114)
356 TIGR03815 CpaE_hom_Actino heli 21.1 1.3E+02 0.0027 31.9 4.6 39 150-194 91-131 (322)
357 PF10649 DUF2478: Protein of u 21.0 1.2E+02 0.0026 28.7 3.9 41 538-578 89-135 (159)
358 TIGR02990 ectoine_eutA ectoine 21.0 7.3E+02 0.016 25.1 9.8 34 151-193 120-153 (239)
359 PRK06719 precorrin-2 dehydroge 20.8 77 0.0017 29.8 2.5 25 170-194 21-45 (157)
360 PRK13231 nitrogenase reductase 20.6 65 0.0014 32.9 2.2 34 152-193 2-37 (264)
361 PRK07313 phosphopantothenoylcy 20.4 1.5E+02 0.0033 28.7 4.5 35 152-194 2-37 (182)
362 PRK11199 tyrA bifunctional cho 20.3 1.1E+02 0.0023 33.4 3.8 33 151-193 98-130 (374)
363 PRK08655 prephenate dehydrogen 20.3 1E+02 0.0022 34.3 3.8 33 152-194 1-33 (437)
364 COG1087 GalE UDP-glucose 4-epi 20.3 1.1E+02 0.0024 32.2 3.7 26 167-192 6-31 (329)
365 COG1090 Predicted nucleoside-d 20.2 85 0.0019 32.6 2.8 31 167-197 4-34 (297)
366 PF07015 VirC1: VirC1 protein; 20.2 1.2E+02 0.0026 30.6 3.9 28 167-194 10-39 (231)
367 PRK07102 short chain dehydroge 20.0 1.2E+02 0.0025 30.2 3.8 25 167-194 10-34 (243)
No 1
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=2.3e-65 Score=582.18 Aligned_cols=488 Identities=33% Similarity=0.539 Sum_probs=397.4
Q ss_pred ccCCceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEE
Q 006091 147 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEI 226 (662)
Q Consensus 147 ~~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 226 (662)
+++.+|||+||+.+..|+.++||++.++..|+++|+++||+|.||+|.|...... .............+.+.|.....
T Consensus 477 ~~~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~--~~~~~~~~~~~~~~~~~g~~~~~ 554 (977)
T PLN02939 477 GTSSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYD--QIRNLKVLDVVVESYFDGNLFKN 554 (977)
T ss_pred CCCCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccChh--hhhcccccceEEEEeecCceeEE
Confidence 3567899999999999999999999999999999999999999999999764311 00000000112222233333456
Q ss_pred EEEEEeeCCceEEEEeCC---CCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcch
Q 006091 227 AFFHEYREGVDWVFVDHP---SYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGL 303 (662)
Q Consensus 227 ~~~~~~~~gv~v~~i~~~---~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l 303 (662)
.++....+|+++|+++.+ .|+.++.+|+ +.|+..||.+|++++++.+..+ +| +|||||||+|++++
T Consensus 555 ~v~~~~~~GV~vyfId~~~~~~fF~R~~iYg-----~~Dn~~RF~~FsrAaLe~~~~~---~~---~PDIIH~HDW~TaL 623 (977)
T PLN02939 555 KIWTGTVEGLPVYFIEPQHPSKFFWRAQYYG-----EHDDFKRFSYFSRAALELLYQS---GK---KPDIIHCHDWQTAF 623 (977)
T ss_pred EEEEEEECCeeEEEEecCCchhccCCCCCCC-----CccHHHHHHHHHHHHHHHHHhc---CC---CCCEEEECCccHHH
Confidence 778888899999999853 2666667775 3699999999999999987654 24 79999999999999
Q ss_pred HHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhc
Q 006091 304 VPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTA 383 (662)
Q Consensus 304 ~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~a 383 (662)
++.++...+...+ +.++|+|+|+|++.+||.++...+..+|++..++....+.- ..+...+++++.++.+|
T Consensus 624 V~pll~~~y~~~~-~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le--------~~~~~~iN~LK~GIv~A 694 (977)
T PLN02939 624 VAPLYWDLYAPKG-FNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQ--------DNAHGRINVVKGAIVYS 694 (977)
T ss_pred HHHHHHHHHhhcc-CCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhh--------hccCCchHHHHHHHHhC
Confidence 8655554332222 36789999999999999998877778888876653211110 00246789999999999
Q ss_pred CEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCC
Q 006091 384 DRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLP 463 (662)
Q Consensus 384 d~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~ 463 (662)
|.|+|||+.+++++.+ .+|.||+..+..+..++.+|+||||++.|.|..+..+..+|+.+++.+|..|+..+++++|++
T Consensus 695 D~VtTVSptYA~EI~t-e~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~ 773 (977)
T PLN02939 695 NIVTTVSPTYAQEVRS-EGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLS 773 (977)
T ss_pred CeeEeeeHHHHHHHHH-HhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHHHHHHhCCC
Confidence 9999999999999998 788999999998999999999999999999999999999999999999999999999999998
Q ss_pred CC-CCCCEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCC-hhhHHHHHHHHhhcC--CcEEEEcCCChHHHHHH
Q 006091 464 IR-PDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGD-PQFESWMRDTEATYK--DKYRGWVGFNVPISHRI 539 (662)
Q Consensus 464 ~~-~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~-~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~l 539 (662)
.+ ++.++|+|+||+.++||++.+++|+..+...+++|+|+|+|+ +.++..++.+..... .++.....+++...+.+
T Consensus 774 ~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~de~lah~I 853 (977)
T PLN02939 774 SADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSHSI 853 (977)
T ss_pred cccccceEEEEeecCCcccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccCHHHHHHH
Confidence 43 457899999999999999999999998877789999999995 344455555555442 34544445577767789
Q ss_pred HHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHh
Q 006091 540 TAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTY 619 (662)
Q Consensus 540 l~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~ 619 (662)
|+.||+||+||++|+||++++|||+||+|||++++||+.|+|.+++..+. ..++.||++|++.|+++++++|.+++..+
T Consensus 854 YAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i-~~eg~NGfLf~~~D~eaLa~AL~rAL~~~ 932 (977)
T PLN02939 854 YAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETI-PVELRNGFTFLTPDEQGLNSALERAFNYY 932 (977)
T ss_pred HHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCcccc-ccCCCceEEecCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999987544331 12257999999999999999999998877
Q ss_pred hhCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhCC
Q 006091 620 REHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDP 658 (662)
Q Consensus 620 ~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy~~~~~~~ 658 (662)
..+++.|.+|+++++.++|||+.++++|+++|++++...
T Consensus 933 ~~dpe~~~~L~~~am~~dFSWe~~A~qYeeLY~~ll~~~ 971 (977)
T PLN02939 933 KRKPEVWKQLVQKDMNIDFSWDSSASQYEELYQRAVARA 971 (977)
T ss_pred ccCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhh
Confidence 678999999999988899999999999999999987643
No 2
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=4.8e-63 Score=551.07 Aligned_cols=478 Identities=37% Similarity=0.603 Sum_probs=388.3
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEee-cCCceEEEE
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICC-FGGEQEIAF 228 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~ 228 (662)
++|||+||+.|..|+.++||++.++..|+++|+++||+|.||.|.|...... .. .......+.. .+. ...+
T Consensus 2 ~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y~~~~~~---~~---~~~~~~~~~~~~~~--~~~~ 73 (485)
T PRK14099 2 TPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLAG---IE---DAEQVHSFPDLFGG--PARL 73 (485)
T ss_pred CCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCCcchhhh---hc---CceEEEEEeeeCCc--eEEE
Confidence 4699999999999999999999999999999999999999999999765311 10 1111111111 121 4556
Q ss_pred EEEeeCCceEEEEeCCCCCCCC-CCCCCC-CCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHH
Q 006091 229 FHEYREGVDWVFVDHPSYHRPG-NPYGDI-NGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPV 306 (662)
Q Consensus 229 ~~~~~~gv~v~~i~~~~~~~~~-~~y~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ 306 (662)
+....+|+++|+++++.|+.+. .+|++. .++|.|+..||..|++++++.+..+. ..| +|||||+|+|++++++.
T Consensus 74 ~~~~~~~v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~-~~~---~pDIiH~Hdw~~~l~~~ 149 (485)
T PRK14099 74 LAARAGGLDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLV-PGF---VPDIVHAHDWQAGLAPA 149 (485)
T ss_pred EEEEeCCceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhc-cCC---CCCEEEECCcHHHHHHH
Confidence 7777789999999999876655 478653 35789999999999999988765431 123 79999999999999998
Q ss_pred HHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEE
Q 006091 307 LLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRL 386 (662)
Q Consensus 307 ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~i 386 (662)
++..+.. .++|+|+|+|++.+++.++...+..++++..++...... +....++++.++..||.|
T Consensus 150 ~l~~~~~-----~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~k~~i~~ad~v 213 (485)
T PRK14099 150 YLHYSGR-----PAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVE-----------YYGGIGYLKAGLQLADRI 213 (485)
T ss_pred HHHhCCC-----CCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhh-----------hCCCccHHHHHHHhcCee
Confidence 8864321 468999999999999988877777777766554322211 234567899999999999
Q ss_pred EecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCC
Q 006091 387 LTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRP 466 (662)
Q Consensus 387 i~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~ 466 (662)
++||+.+++++++..++.|++..+..+..++.+|+||||++.|.|..+..+..+|+.+++.+|..++..+++++|++.++
T Consensus 214 itVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~ 293 (485)
T PRK14099 214 TTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLDPDP 293 (485)
T ss_pred eecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCCccc
Confidence 99999999999877677777777777788999999999999999988888888999988999999999999999998656
Q ss_pred CCCEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEE
Q 006091 467 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 546 (662)
Q Consensus 467 ~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~ 546 (662)
+.++|+++||+.++||++.|++|++.+.+++++|+|+|+|++.++..++.+......++..+++++++..+.+++.||++
T Consensus 294 ~~~li~~VgRL~~~KG~d~Li~A~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~~~~l~~~~~a~aDif 373 (485)
T PRK14099 294 DALLLGVISRLSWQKGLDLLLEALPTLLGEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDEALAHLIQAGADAL 373 (485)
T ss_pred CCcEEEEEecCCccccHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHhcCCEE
Confidence 77899999999999999999999999987789999999997666666676666555566668888666554445789999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHH
Q 006091 547 LMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSW 626 (662)
Q Consensus 547 v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~ 626 (662)
++||.+|+||++++|||+||+|||++++||++|+|.+.+...+ ..+..+|++|++.|+++++++|.+++..+ +|++.+
T Consensus 374 v~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~-~~~~~~G~l~~~~d~~~La~ai~~a~~l~-~d~~~~ 451 (485)
T PRK14099 374 LVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAI-ATGVATGVQFSPVTADALAAALRKTAALF-ADPVAW 451 (485)
T ss_pred EECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeeccccccc-ccCCCceEEeCCCCHHHHHHHHHHHHHHh-cCHHHH
Confidence 9999999999999999999999999999999999987211100 00126899999999999999999865543 578999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhhC
Q 006091 627 EGLMRRGMEKDYTWENAAIQYEQVFEWASID 657 (662)
Q Consensus 627 ~~l~~~~~~~~fs~e~~a~~~~~iy~~~~~~ 657 (662)
++++++++.++|||++++++|+++|++++..
T Consensus 452 ~~l~~~~~~~~fSw~~~a~~y~~lY~~l~~~ 482 (485)
T PRK14099 452 RRLQRNGMTTDVSWRNPAQHYAALYRSLVAE 482 (485)
T ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHHHhh
Confidence 9999999889999999999999999998764
No 3
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=7.9e-63 Score=549.89 Aligned_cols=482 Identities=32% Similarity=0.551 Sum_probs=388.3
Q ss_pred cCCceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEE
Q 006091 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIA 227 (662)
Q Consensus 148 ~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 227 (662)
++++|||+||++|..|+.++||++.++..|+++|+++||+|.||.|.|........... .........+...+......
T Consensus 2 ~~~~~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 80 (489)
T PRK14098 2 SRRNFKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGTINDRKFRLH-DVLRLSDIEVPLKEKTDLLH 80 (489)
T ss_pred CCCCcEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCchhhhhhccc-cceEEEEEEEeecCeeEEEE
Confidence 46679999999999999999999999999999999999999999999976432100000 00001111122222111111
Q ss_pred EEEEee--CCceEEEEeCCCCCCCCCCCCCC--CCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcch
Q 006091 228 FFHEYR--EGVDWVFVDHPSYHRPGNPYGDI--NGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGL 303 (662)
Q Consensus 228 ~~~~~~--~gv~v~~i~~~~~~~~~~~y~~~--~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l 303 (662)
...... .++++|+++++.|+.+..+|++. .++|.|+..||..|++++++.+..+ +| +|||||+|+|++++
T Consensus 81 ~~~~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~---~~---~pDiiH~hdw~t~l 154 (489)
T PRK14098 81 VKVTALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRL---GW---KPDIIHCHDWYAGL 154 (489)
T ss_pred EEEecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhc---CC---CCCEEEecCcHHHH
Confidence 111222 36999999999988888889874 3589999999999999999887543 23 79999999999999
Q ss_pred HHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhc
Q 006091 304 VPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTA 383 (662)
Q Consensus 304 ~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~a 383 (662)
+|.+++.+......+.++|+|+|+|++.+|+.++...+..+ ++..++.... .+....++++.++.+|
T Consensus 155 ~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~-~~~~~~~~~~------------~~~~~~n~lk~~i~~a 221 (489)
T PRK14098 155 VPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKL-LPEEVCSGLH------------REGDEVNMLYTGVEHA 221 (489)
T ss_pred HHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHh-CCHHhhhhhh------------hcCCcccHHHHHHHhc
Confidence 99999876543333468999999999999998776555433 3333221110 1134678999999999
Q ss_pred CEEEecCcchhhhhhcc-cCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCC
Q 006091 384 DRLLTVSKGYSWEITTV-EGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGL 462 (662)
Q Consensus 384 d~ii~vS~~~~~~i~~~-~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl 462 (662)
|.|++||+.+++++++. ..++|+...+.....++.+|+||||++.|.|..+..+..+|+.+++.+|..+|..+++++|+
T Consensus 222 d~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl 301 (489)
T PRK14098 222 DLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALLEEVGL 301 (489)
T ss_pred CcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHHHHHHHhCC
Confidence 99999999999999873 56677877777778899999999999999998888888899998899999999999999999
Q ss_pred CCCCCCCEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHh
Q 006091 463 PIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAG 542 (662)
Q Consensus 463 ~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~ 542 (662)
+.+++.++|+++||+.++||++.|++|++++.+++++|+|+|+|+..++..++.+......++.....+++++++.+|++
T Consensus 302 ~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~~a~ 381 (489)
T PRK14098 302 PFDEETPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHLAIAG 381 (489)
T ss_pred CCccCCCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecCHHHHHHHHHh
Confidence 87778899999999999999999999999998779999999999765666666666655555554555677888899999
Q ss_pred cCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhC
Q 006091 543 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREH 622 (662)
Q Consensus 543 aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~ 622 (662)
||++++||.+|+||++++|||+||+|||++++||+.|++.+++. ++++|++|++.|+++++++|.+++..+ ++
T Consensus 382 aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~------~~~~G~l~~~~d~~~la~ai~~~l~~~-~~ 454 (489)
T PRK14098 382 LDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSE------DKGSGFIFHDYTPEALVAKLGEALALY-HD 454 (489)
T ss_pred CCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCC------CCCceeEeCCCCHHHHHHHHHHHHHHH-cC
Confidence 99999999999999999999999999999999999999875321 157999999999999999999988654 57
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 006091 623 KSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASI 656 (662)
Q Consensus 623 ~~~~~~l~~~~~~~~fs~e~~a~~~~~iy~~~~~ 656 (662)
++.+.+++++++.++|||++++++|+++|+++++
T Consensus 455 ~~~~~~~~~~~~~~~fsw~~~a~~y~~lY~~~~~ 488 (489)
T PRK14098 455 EERWEELVLEAMERDFSWKNSAEEYAQLYRELLG 488 (489)
T ss_pred HHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhc
Confidence 8899999998888999999999999999999874
No 4
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=5.1e-61 Score=536.69 Aligned_cols=472 Identities=44% Similarity=0.726 Sum_probs=393.5
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEE
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 231 (662)
|||++|+.+++|+.++||++.++..|+++|+++||+|.|++|.|+...... ...........+...+....+.++..
T Consensus 1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (473)
T TIGR02095 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEV---DDQVKVVELVDLSVGPRTLYVKVFEG 77 (473)
T ss_pred CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChhhhh---ccCeEEEEEEEEeecCceeEEEEEEE
Confidence 899999999999999999999999999999999999999999987643211 11111222344556677778888899
Q ss_pred eeCCceEEEEeCCCCCCC-CCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHh
Q 006091 232 YREGVDWVFVDHPSYHRP-GNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 310 (662)
Q Consensus 232 ~~~gv~v~~i~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~ 310 (662)
..+|+++++++++.+..+ ..+|++ +|.++..+|..|++++.+.+... ++ +|||||+|+|++++++.+++.
T Consensus 78 ~~~~v~~~~i~~~~~~~r~~~~y~~---~~~d~~~r~~~f~~a~~~~~~~~---~~---~~DiiH~hdw~~~~~~~~l~~ 148 (473)
T TIGR02095 78 VVEGVPVYFIDNPSLFDRPGGIYGD---DYPDNAERFAFFSRAAAELLSGL---GW---QPDVVHAHDWHTALVPALLKA 148 (473)
T ss_pred EECCceEEEEECHHHcCCCCCCCCC---CCCCHHHHHHHHHHHHHHHHHhc---CC---CCCEEEECCcHHHHHHHHHHh
Confidence 999999999998875544 457765 57899999999999998876543 22 799999999999999999887
Q ss_pred hcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecC
Q 006091 311 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 390 (662)
Q Consensus 311 ~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS 390 (662)
..+. .++|+|+|+|++.+++.++...+..++++..++.... +.+...+++++.++..||.|++||
T Consensus 149 ~~~~----~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~k~~~~~ad~v~tVS 213 (473)
T TIGR02095 149 VYRP----NPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEG-----------LEFYGRVNFLKGGIVYADRVTTVS 213 (473)
T ss_pred hccC----CCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchh-----------hhcCCchHHHHHHHHhCCcCeecC
Confidence 6521 1499999999999898887766655565544332111 112346889999999999999999
Q ss_pred cchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCE
Q 006091 391 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 470 (662)
Q Consensus 391 ~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~ 470 (662)
+.+++++.+..++.++...+..++.++.+|+||||++.|.|..+..+..+|+..+..++..++..+++++|++.+++.++
T Consensus 214 ~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~ 293 (473)
T TIGR02095 214 PTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPL 293 (473)
T ss_pred HhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCE
Confidence 99999998766677777666677889999999999999999888888888998888889999999999999985557899
Q ss_pred EEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEEEcC
Q 006091 471 IGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPS 550 (662)
Q Consensus 471 Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~PS 550 (662)
|+|+||+.++||++.+++|++++.+.+++|+|+|+|++.+.+.++.+......++..+.+++++.++.+|++||++++||
T Consensus 294 i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv~l~pS 373 (473)
T TIGR02095 294 FGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGADFILMPS 373 (473)
T ss_pred EEEEecCccccChHHHHHHHHHHHHcCcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhCCEEEeCC
Confidence 99999999999999999999999877899999999976667777777766666777777788888889999999999999
Q ss_pred CCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHH
Q 006091 551 RFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLM 630 (662)
Q Consensus 551 ~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~ 630 (662)
.+|+||++++|||+||+|||++++||+.|+|.+.+.. .++++|+++++.|+++++++|.+++..+.++++.+++++
T Consensus 374 ~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~----~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~ 449 (473)
T TIGR02095 374 RFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPE----AESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQ 449 (473)
T ss_pred CcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCC----CCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 9999999999999999999999999999999882111 012899999999999999999999987766899999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHHh
Q 006091 631 RRGMEKDYTWENAAIQYEQVFEWA 654 (662)
Q Consensus 631 ~~~~~~~fs~e~~a~~~~~iy~~~ 654 (662)
++++.++|||++++++|+++|+++
T Consensus 450 ~~~~~~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 450 KNAMSQDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred HHHhccCCCcHHHHHHHHHHHHhC
Confidence 999888999999999999999864
No 5
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=5.5e-60 Score=526.83 Aligned_cols=463 Identities=43% Similarity=0.708 Sum_probs=376.5
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEE-
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFH- 230 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~- 230 (662)
|||+||+.+++|+.++||++.++..|+++|+++||+|.|++|.|+....... +......+ ....++.
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~~~~~~------~~~~~~~~------~~~~~~~~ 68 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLR------DAQVVGRL------DLFTVLFG 68 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcchhhhhc------CceEEEEe------eeEEEEEE
Confidence 8999999999999999999999999999999999999999999865332110 00000111 0122222
Q ss_pred -EeeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHH
Q 006091 231 -EYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 309 (662)
Q Consensus 231 -~~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~ 309 (662)
...+|+++++++++.|..+...|+ +.++..||..|++++++.+..+. + +|||||+|+|++++++.+++
T Consensus 69 ~~~~~gv~v~~v~~~~~~~~~~~y~-----~~d~~~r~~~f~~~~~~~~~~~~---~---~pDiiH~h~w~~~~~~~~l~ 137 (466)
T PRK00654 69 HLEGDGVPVYLIDAPHLFDRPSGYG-----YPDNGERFAFFSWAAAEFAEGLD---P---RPDIVHAHDWHTGLIPALLK 137 (466)
T ss_pred eEEcCCceEEEEeCHHHcCCCCCCC-----CcChHHHHHHHHHHHHHHHHhcC---C---CCceEEECCcHHHHHHHHHH
Confidence 245899999999988777666665 46889999999999988765542 2 79999999999999999988
Q ss_pred hhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEec
Q 006091 310 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 389 (662)
Q Consensus 310 ~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~v 389 (662)
..+ .. .+.++|+|+|+|++.+++.++......++++...+.... +.+....++++.++..||.|++|
T Consensus 138 ~~~-~~-~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ad~vitv 204 (466)
T PRK00654 138 EKY-WR-GYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEG-----------LEFYGQISFLKAGLYYADRVTTV 204 (466)
T ss_pred Hhh-hc-cCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchh-----------hhcCCcccHHHHHHHhcCcCeee
Confidence 653 11 124799999999999998887666666666544332111 11134568899999999999999
Q ss_pred CcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCC
Q 006091 390 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP 469 (662)
Q Consensus 390 S~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~ 469 (662)
|+.+++++.+..+++|+...+..+..++.+|+||||++.|.|..+..+..+|+..++.++..++..+++++|++ +++.+
T Consensus 205 S~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~-~~~~~ 283 (466)
T PRK00654 205 SPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLP-DDDAP 283 (466)
T ss_pred CHHHHHHhccccCCcChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHHHHHHHHHhCCC-CCCCc
Confidence 99999999877777778777777788999999999999999987777777888888888999999999999997 23678
Q ss_pred EEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEEEc
Q 006091 470 LIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMP 549 (662)
Q Consensus 470 ~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~P 549 (662)
+|+|+||+.++||++.|++|++++.+++++|+|+|+|++.+...++.+......++..+.+++++..+.+|++||++|+|
T Consensus 284 ~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~~~~aDv~v~P 363 (466)
T PRK00654 284 LFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGADMFLMP 363 (466)
T ss_pred EEEEeeccccccChHHHHHHHHHHHhcCCEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHhhCCEEEeC
Confidence 99999999999999999999999987799999999997666666676666666666667788777777899999999999
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 006091 550 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 629 (662)
Q Consensus 550 S~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l 629 (662)
|.+|+||++++|||+||+|||++++||++|+|.+.+.. .++++|++|++.|+++++++|.+++..+ .+++.+.++
T Consensus 364 S~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~----~~~~~G~lv~~~d~~~la~~i~~~l~~~-~~~~~~~~~ 438 (466)
T PRK00654 364 SRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPE----DGEATGFVFDDFNAEDLLRALRRALELY-RQPPLWRAL 438 (466)
T ss_pred CCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCC----CCCCceEEeCCCCHHHHHHHHHHHHHHh-cCHHHHHHH
Confidence 99999999999999999999999999999999872111 1128999999999999999999998755 456778999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 006091 630 MRRGMEKDYTWENAAIQYEQVFEWASI 656 (662)
Q Consensus 630 ~~~~~~~~fs~e~~a~~~~~iy~~~~~ 656 (662)
+++++.++|||++++++|+++|++++.
T Consensus 439 ~~~~~~~~fsw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 439 QRQAMAQDFSWDKSAEEYLELYRRLLG 465 (466)
T ss_pred HHHHhccCCChHHHHHHHHHHHHHHhh
Confidence 999888899999999999999998864
No 6
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=6.5e-57 Score=504.15 Aligned_cols=475 Identities=44% Similarity=0.720 Sum_probs=388.9
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEe
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 232 (662)
||++|+.+++|+.++||++.++..|+++|+++||+|.|++|.|....... ...........+...+....+.++...
T Consensus 1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (476)
T cd03791 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDEL---RGQLLVLRLFGVPVGGRPEYVGVFELP 77 (476)
T ss_pred CEEEEEccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhhHh---ccCeEEEEEEeeccCCceeEEEEEEEE
Confidence 79999999999999999999999999999999999999999987643211 111111122234556677778888888
Q ss_pred eCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHhhc
Q 006091 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 312 (662)
Q Consensus 233 ~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~~ 312 (662)
.+|+++++++++.+..+...|+.....|.++..+|..|+.++.+.+..+ . .+|||||+|+|++++++.+++...
T Consensus 78 ~~gv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~~---~---~~pDviH~hd~~t~~~~~~l~~~~ 151 (476)
T cd03791 78 VDGVPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRRL---G---WKPDIIHCHDWHTGLVPALLKEKY 151 (476)
T ss_pred eCCceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHhc---C---CCCcEEEECchHHHHHHHHHHHhh
Confidence 8999999999988776665555555678899999999999998876654 1 279999999999999999888764
Q ss_pred CCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCcc
Q 006091 313 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 392 (662)
Q Consensus 313 ~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~~ 392 (662)
.. ..+.++|+|+|+|++.+++.++.......+..... +.......+....++++.++..||.|++||+.
T Consensus 152 ~~-~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~ 220 (476)
T cd03791 152 AD-PFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEE----------LFHIDGLEFYGQVNFLKAGIVYADAVTTVSPT 220 (476)
T ss_pred cc-ccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccc----------hhhhcccccCCcccHHHHHHHhcCcCeecCHh
Confidence 22 12358999999999998887766555444432210 01111222345678999999999999999999
Q ss_pred hhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEEE
Q 006091 393 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 472 (662)
Q Consensus 393 ~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il 472 (662)
+++++.+..++.+++..+.....++.+|+||+|.+.|.|..+..+..+|+.....++..++..+++++|++.+++.++|+
T Consensus 221 ~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~ 300 (476)
T cd03791 221 YAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFG 300 (476)
T ss_pred HHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEE
Confidence 99999887777888777777778999999999999999988877778888777788999999999999997667889999
Q ss_pred EEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEEEcCCC
Q 006091 473 FIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRF 552 (662)
Q Consensus 473 ~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~PS~~ 552 (662)
|+||+.++||++.+++|++.+.+.+++|+++|+|++.+...++.+......++..+.+++++..+.+|+.||++++||.+
T Consensus 301 ~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~ 380 (476)
T cd03791 301 FVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGADFFLMPSRF 380 (476)
T ss_pred EEeeccccccHHHHHHHHHHHHHcCcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhCCEEECCCCC
Confidence 99999999999999999999987789999999997666666666666555677777788877778899999999999999
Q ss_pred CCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHH
Q 006091 553 EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRR 632 (662)
Q Consensus 553 E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~ 632 (662)
|+||++++|||+||+|||++++||++|+|.+.+.. .+.++|++|++.|+++++++|.++++.+ .+++.+.+++++
T Consensus 381 E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~----~~~~~G~~~~~~~~~~l~~~i~~~l~~~-~~~~~~~~~~~~ 455 (476)
T cd03791 381 EPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNED----TGEGTGFVFEGYNADALLAALRRALALY-RDPEAWRKLQRN 455 (476)
T ss_pred CCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCC----CCCCCeEEeCCCCHHHHHHHHHHHHHHH-cCHHHHHHHHHH
Confidence 99999999999999999999999999999982100 0123999999999999999999998755 458899999999
Q ss_pred HHHhcCCHHHHHHHHHHHHH
Q 006091 633 GMEKDYTWENAAIQYEQVFE 652 (662)
Q Consensus 633 ~~~~~fs~e~~a~~~~~iy~ 652 (662)
++...|+|++++++|+++|+
T Consensus 456 ~~~~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 456 AMAQDFSWDRSAKEYLELYR 475 (476)
T ss_pred HhccCCChHHHHHHHHHHHh
Confidence 98889999999999999996
No 7
>PLN02316 synthase/transferase
Probab=100.00 E-value=2.5e-56 Score=517.49 Aligned_cols=442 Identities=35% Similarity=0.539 Sum_probs=352.4
Q ss_pred cCCceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEE
Q 006091 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIA 227 (662)
Q Consensus 148 ~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 227 (662)
.+.+|||+||+.+++|+.++||++.++..|+++|+++||+|.||+|.|...... ...+.... ..+......+.
T Consensus 584 ~~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~-----~~~~~~~~--~~~~~~~~~~~ 656 (1036)
T PLN02316 584 KEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLS-----HVKDLHYQ--RSYSWGGTEIK 656 (1036)
T ss_pred CCCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcccchh-----hcccceEE--EEeccCCEEEE
Confidence 456899999999999999999999999999999999999999999998653210 00111111 12222334566
Q ss_pred EEEEeeCCceEEEEeCCC-CCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHH
Q 006091 228 FFHEYREGVDWVFVDHPS-YHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPV 306 (662)
Q Consensus 228 ~~~~~~~gv~v~~i~~~~-~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ 306 (662)
++....+|+++|+++++. ++.++.+|+ +.|+..+|..|++++++++... +| +|||||||+|++++++.
T Consensus 657 v~~~~~~GV~vyfl~~~~~~F~r~~~Yg-----~~Dd~~RF~~F~~Aale~l~~~---~~---~PDIIHaHDW~talva~ 725 (1036)
T PLN02316 657 VWFGKVEGLSVYFLEPQNGMFWAGCVYG-----CRNDGERFGFFCHAALEFLLQS---GF---HPDIIHCHDWSSAPVAW 725 (1036)
T ss_pred EEEEEECCcEEEEEeccccccCCCCCCC-----chhHHHHHHHHHHHHHHHHHhc---CC---CCCEEEECCChHHHHHH
Confidence 777888999999999763 555555664 4699999999999999987654 23 79999999999999999
Q ss_pred HHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEE
Q 006091 307 LLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRL 386 (662)
Q Consensus 307 ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~i 386 (662)
+++..++..+ ..++|+|+|+|++.++. ++++.++..+|.|
T Consensus 726 llk~~~~~~~-~~~~p~V~TiHnl~~~~---------------------------------------n~lk~~l~~AD~V 765 (1036)
T PLN02316 726 LFKDHYAHYG-LSKARVVFTIHNLEFGA---------------------------------------NHIGKAMAYADKA 765 (1036)
T ss_pred HHHHhhhhhc-cCCCCEEEEeCCcccch---------------------------------------hHHHHHHHHCCEE
Confidence 9887643222 25789999999864321 1245677899999
Q ss_pred EecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCccccc-chhHHhHHHHHHHhCCCCC
Q 006091 387 LTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDL-SGKVQCKIALQKELGLPIR 465 (662)
Q Consensus 387 i~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~-~~~~~~k~~~r~~lgl~~~ 465 (662)
++||+.+++++.+. ..+..+..++.+|+||||++.|.|..+..+..+|+.++. .+|..++..+++++|++.
T Consensus 766 iTVS~tya~EI~~~-------~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~- 837 (1036)
T PLN02316 766 TTVSPTYSREVSGN-------SAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQ- 837 (1036)
T ss_pred EeCCHHHHHHHHhc-------cCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCCc-
Confidence 99999999988641 112334579999999999999999888778888888775 688899999999999982
Q ss_pred CCCCEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCC-hhhHHHHHHHHhhc----CCcEEEEcCCChHHHHHHH
Q 006091 466 PDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGD-PQFESWMRDTEATY----KDKYRGWVGFNVPISHRIT 540 (662)
Q Consensus 466 ~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~-~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~ll 540 (662)
++.++|+|+|||.++||+++|++|++.+.+.+++|+|+|+|+ +.+...++.+.... ..++....++++...+.+|
T Consensus 838 ~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~lah~iy 917 (1036)
T PLN02316 838 ADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLIY 917 (1036)
T ss_pred ccCeEEEEEeccccccCHHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHHHHHH
Confidence 367899999999999999999999999877789999999994 33444555555432 3455555667777677899
Q ss_pred HhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccC---CCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 541 AGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFARE---GSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 541 ~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~---~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
+.||++|+||++|+||+++||||+||+|||++++||++|+|.+.+..+.. ...+.||++|++.|+++++.+|.+++.
T Consensus 918 aaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~ 997 (1036)
T PLN02316 918 AGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAIS 997 (1036)
T ss_pred HhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999884332110 001369999999999999999999998
Q ss_pred HhhhCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Q 006091 618 TYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWAS 655 (662)
Q Consensus 618 ~~~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy~~~~ 655 (662)
.+.+.+..+.+++++++.+.|||+.++++|+++|+.+.
T Consensus 998 ~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 998 AWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred hhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 76556677788888889999999999999999999875
No 8
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.5e-56 Score=486.03 Aligned_cols=483 Identities=37% Similarity=0.595 Sum_probs=413.3
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEE
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 231 (662)
|||++++.+..|+.++||++.++..|+++|+++||+|.|+.|.|+.... .+.+..+......+...+..+.......
T Consensus 1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g~~v~v~lP~y~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (487)
T COG0297 1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQK---EWRDLLKVVGKFGVLKGGRAQLFIVKEY 77 (487)
T ss_pred CcceeeeeeecCccccCcHHHHHHHhHHHHHhcCCeEEEEcCCchhhhh---hhccccceeeEeeeeecccceEEEEEee
Confidence 8999999999999999999999999999999999999999999974332 2332222222333333444444444444
Q ss_pred eeCC-ceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHh
Q 006091 232 YREG-VDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 310 (662)
Q Consensus 232 ~~~g-v~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~ 310 (662)
..++ +++++++.+.+..+. ......+.|+..||..|++++.+........ | .|||||+||||+++++.+++.
T Consensus 78 ~~~~~v~~~lid~~~~f~r~---~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~-~---~pDIvH~hDWqt~L~~~~lk~ 150 (487)
T COG0297 78 GKDGGVDLYLIDNPALFKRP---DSTLYGYYDNAERFAFFSLAAAELAPLGLIS-W---LPDIVHAHDWQTGLLPAYLKQ 150 (487)
T ss_pred cccCCCcEEEecChhhcCcc---ccccCCCCcHHHHHHHHHHHHHHHhhhcCCC-C---CCCEEEeecHHHHHHHHHHhh
Confidence 4344 999999988766552 1122346799999999999998876444322 4 799999999999999999998
Q ss_pred hcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecC
Q 006091 311 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 390 (662)
Q Consensus 311 ~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS 390 (662)
... .+..+|+|+|+|++.+||.++......++++...+......+ ....+++|..+..||.|++||
T Consensus 151 ~~~---~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~-----------~~~~~~lK~gi~~ad~vttVS 216 (487)
T COG0297 151 RYR---SGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEF-----------YGQISFLKGGLYYADAVTTVS 216 (487)
T ss_pred ccc---ccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeee-----------cCcchhhhhhheeccEEEEEC
Confidence 641 115799999999999999999777788888876665222222 355789999999999999999
Q ss_pred cchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCE
Q 006091 391 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 470 (662)
Q Consensus 391 ~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~ 470 (662)
+.+++++.+++++++++..+.....++..|.||+|...|+|..+..+..+|+.+.++.|..+|..++.++|++.+.+.|+
T Consensus 217 ptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~pl 296 (487)
T COG0297 217 PTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGLDVDLPGPL 296 (487)
T ss_pred HHHHHhhccccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCCCCCCCCcE
Confidence 99999999999999999998888899999999999999999999999999999999889999999999999998778899
Q ss_pred EEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEEEcC
Q 006091 471 IGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPS 550 (662)
Q Consensus 471 Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~PS 550 (662)
+.++||+..+||+|++++++..+.+..++++++|.|++.++..+..+++....++...+++++...+.+++.||++++||
T Consensus 297 ~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~agaD~~lmPS 376 (487)
T COG0297 297 FGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAGADVILMPS 376 (487)
T ss_pred EEEeeccccccchhHHHHHHHHHHHhCceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeecHHHHHHHHhcCCEEEeCC
Confidence 99999999999999999999999998899999999999999999999998888888889999999999999999999999
Q ss_pred CCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHH
Q 006091 551 RFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLM 630 (662)
Q Consensus 551 ~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~ 630 (662)
++|+||++.++||++|+++|++.+||++|.|.+++++. ..+.++|++|.+.++++++.+|..++..+...+..|+.+.
T Consensus 377 rfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~--~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~~~ 454 (487)
T COG0297 377 RFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWL--IQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLLWRKVQ 454 (487)
T ss_pred cCcCCcHHHHHHHHcCCcceEcccCCccceecCccchh--ccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence 99999999999999999999999999999999987763 2346899999999999999999999988877777799999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHHhhhCCCC
Q 006091 631 RRGMEKDYTWENAAIQYEQVFEWASIDPPY 660 (662)
Q Consensus 631 ~~~~~~~fs~e~~a~~~~~iy~~~~~~~~~ 660 (662)
.+++...|+|+..+++|.++|+.++..+-+
T Consensus 455 ~~~m~~d~sw~~sa~~y~~lY~~~~~~~~~ 484 (487)
T COG0297 455 PNAMGADFSWDLSAKEYVELYKPLLSKPFW 484 (487)
T ss_pred HhhcccccCchhHHHHHHHHHHHHhccccc
Confidence 999989999999999999999999886654
No 9
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=5.5e-39 Score=358.22 Aligned_cols=379 Identities=16% Similarity=0.197 Sum_probs=260.0
Q ss_pred CCceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEE
Q 006091 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAF 228 (662)
Q Consensus 149 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 228 (662)
.++|||++++... |+...||++.++.+|+++|.++||+|+|+|+.... . .
T Consensus 56 ~~~mrI~~~~~~~-~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~--~--~------------------------- 105 (465)
T PLN02871 56 SRPRRIALFVEPS-PFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGV--P--Q------------------------- 105 (465)
T ss_pred CCCceEEEEECCc-CCcccccHHHHHHHHHHHHHHCCCeEEEEecCCCC--C--c-------------------------
Confidence 5789999998533 33457999999999999999999999999976321 0 0
Q ss_pred EEEeeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHH
Q 006091 229 FHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 308 (662)
Q Consensus 229 ~~~~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll 308 (662)
...++.++.+...... .+... ...+. +...+.+.++. .+|||||+|.......+.++
T Consensus 106 ---~~~g~~v~~~~~~~~~----~~~~~-------~~~~~-~~~~l~~~i~~--------~kpDiIh~~~~~~~~~~~~~ 162 (465)
T PLN02871 106 ---EFHGAKVIGSWSFPCP----FYQKV-------PLSLA-LSPRIISEVAR--------FKPDLIHASSPGIMVFGALF 162 (465)
T ss_pred ---cccCceeeccCCcCCc----cCCCc-------eeecc-CCHHHHHHHHh--------CCCCEEEECCCchhHHHHHH
Confidence 0123332221110000 00000 00000 00011112111 16999999975443333333
Q ss_pred HhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEe
Q 006091 309 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 388 (662)
Q Consensus 309 ~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~ 388 (662)
..+. .++|+|++.|+.... . ...... .+. . .....+++...+.+|.+++
T Consensus 163 ~ak~------~~ip~V~~~h~~~~~-----~-~~~~~~--~~~------~-----------~~~~~~~r~~~~~ad~ii~ 211 (465)
T PLN02871 163 YAKL------LCVPLVMSYHTHVPV-----Y-IPRYTF--SWL------V-----------KPMWDIIRFLHRAADLTLV 211 (465)
T ss_pred HHHH------hCCCEEEEEecCchh-----h-hhcccc--hhh------H-----------HHHHHHHHHHHhhCCEEEE
Confidence 3333 589999999974210 0 000000 000 0 0112345666789999999
Q ss_pred cCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCC
Q 006091 389 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 468 (662)
Q Consensus 389 vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~ 468 (662)
+|+...+.+.. ....+..++.+||||+|.+.|.+.... ..+++++... .++.
T Consensus 212 ~S~~~~~~l~~---------~~~~~~~kv~vi~nGvd~~~f~p~~~~------------------~~~~~~~~~~-~~~~ 263 (465)
T PLN02871 212 TSPALGKELEA---------AGVTAANRIRVWNKGVDSESFHPRFRS------------------EEMRARLSGG-EPEK 263 (465)
T ss_pred CCHHHHHHHHH---------cCCCCcCeEEEeCCccCccccCCcccc------------------HHHHHHhcCC-CCCC
Confidence 99998887752 112335789999999999888764321 2344444321 1467
Q ss_pred CEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEEE
Q 006091 469 PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLM 548 (662)
Q Consensus 469 ~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~ 548 (662)
++|+|+||+.+.||++.++++++.+ ++++|+|+|+|+ +.+.++++....++.+.|++ ..+++..+|+.||++|+
T Consensus 264 ~~i~~vGrl~~~K~~~~li~a~~~~--~~~~l~ivG~G~--~~~~l~~~~~~~~V~f~G~v--~~~ev~~~~~~aDv~V~ 337 (465)
T PLN02871 264 PLIVYVGRLGAEKNLDFLKRVMERL--PGARLAFVGDGP--YREELEKMFAGTPTVFTGML--QGDELSQAYASGDVFVM 337 (465)
T ss_pred eEEEEeCCCchhhhHHHHHHHHHhC--CCcEEEEEeCCh--HHHHHHHHhccCCeEEeccC--CHHHHHHHHHHCCEEEE
Confidence 8999999999999999999999887 589999999985 23334444434445555555 44667799999999999
Q ss_pred cCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHH
Q 006091 549 PSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEG 628 (662)
Q Consensus 549 PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~ 628 (662)
||.+|+||++++||||||+|||+++.||+.|++.+. ..+++|++++++|+++++++|.++++ |++.+.+
T Consensus 338 pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~-------~~~~~G~lv~~~d~~~la~~i~~ll~----~~~~~~~ 406 (465)
T PLN02871 338 PSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPD-------QEGKTGFLYTPGDVDDCVEKLETLLA----DPELRER 406 (465)
T ss_pred CCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcC-------CCCCceEEeCCCCHHHHHHHHHHHHh----CHHHHHH
Confidence 999999999999999999999999999999999751 12689999999999999999999987 8888889
Q ss_pred HHHHH--HHhcCCHHHHHHHHHH-HHHHhhh
Q 006091 629 LMRRG--MEKDYTWENAAIQYEQ-VFEWASI 656 (662)
Q Consensus 629 l~~~~--~~~~fs~e~~a~~~~~-iy~~~~~ 656 (662)
|++++ ..++|+|+.+++++++ +|++++.
T Consensus 407 ~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~ 437 (465)
T PLN02871 407 MGAAAREEVEKWDWRAATRKLRNEQYSAAIW 437 (465)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 98887 3478999999999998 7988764
No 10
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=1e-38 Score=353.49 Aligned_cols=407 Identities=19% Similarity=0.175 Sum_probs=262.3
Q ss_pred eeEEEEeecc----cC-----ccccCcHHHHHhhHHHHHHhCCC--cEEEEeecCCCCCCcccchhhhcccCceeEEeec
Q 006091 152 YNIVFVTAEA----AP-----YSKTGGLGDVCGSLPVALAARGH--RVMVVSPRYFNGTAADENFTLAKDLGCCMKICCF 220 (662)
Q Consensus 152 MkIl~vs~~~----~P-----~~~~GG~~~~~~~La~~L~~~Gh--eV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 220 (662)
+||++++.+. .| .+..||+++++.+|+++|+++|| +|+|+|..++..... +.|..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~-~~~~~------------- 66 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVS-PDYAQ------------- 66 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCC-CccCC-------------
Confidence 3677777665 22 12379999999999999999997 999999765432100 01110
Q ss_pred CCceEEEEEEEeeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCC
Q 006091 221 GGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWH 300 (662)
Q Consensus 221 ~~~~~~~~~~~~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~ 300 (662)
...+..+|+++++++..... +.. ..+.......+...+.+.++.. ..+|||||+|++.
T Consensus 67 -------~~~~~~~gv~v~r~~~~~~~-----~~~----~~~~~~~~~~~~~~l~~~~~~~------~~~~DvIH~h~~~ 124 (439)
T TIGR02472 67 -------PIERIAPGARIVRLPFGPRR-----YLR----KELLWPYLDELADNLLQHLRQQ------GHLPDLIHAHYAD 124 (439)
T ss_pred -------CeeEeCCCcEEEEecCCCCC-----CcC----hhhhhhhHHHHHHHHHHHHHHc------CCCCCEEEEcchh
Confidence 01344579999998743210 100 0000111122333333333211 1169999999988
Q ss_pred cchHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHH
Q 006091 301 AGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAI 380 (662)
Q Consensus 301 ~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 380 (662)
+++++.+++.. .++|+|+|.|+..... ...+...+.....+.. .+.......+++.++
T Consensus 125 ~~~~~~~~~~~-------~~~p~V~t~H~~~~~~---~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~ 182 (439)
T TIGR02472 125 AGYVGARLSRL-------LGVPLIFTGHSLGREK---RRRLLAAGLKPQQIEK------------QYNISRRIEAEEETL 182 (439)
T ss_pred HHHHHHHHHHH-------hCCCEEEecccccchh---hhhcccCCCChhhhhh------------hcchHHHHHHHHHHH
Confidence 87777766654 4799999999752110 0000000100000000 001122234577889
Q ss_pred HhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHh
Q 006091 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKEL 460 (662)
Q Consensus 381 ~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~l 460 (662)
+.+|.|+++|+........ ...+.++.++.+||||||++.|.+..... .....+. .++++
T Consensus 183 ~~ad~ii~~s~~~~~~~~~--------~~~~~~~~ki~vIpnGvd~~~f~~~~~~~-----------~~~~~~~-~~~~~ 242 (439)
T TIGR02472 183 AHASLVITSTHQEIEEQYA--------LYDSYQPERMQVIPPGVDLSRFYPPQSSE-----------ETSEIDN-LLAPF 242 (439)
T ss_pred HhCCEEEECCHHHHHHHHH--------hccCCCccceEEECCCcChhhcCCCCccc-----------cchhHHH-HHHhh
Confidence 9999999998654332210 11134567899999999999887643210 0001112 22334
Q ss_pred CCCCCCCCCEEEEEecCCCccCHHHHHHHHHhcc--CCCeEEE-EEeCCCh--hhHH----HH---HHHHhhc-CCcEEE
Q 006091 461 GLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEIL--ADDIQFV-MLGSGDP--QFES----WM---RDTEATY-KDKYRG 527 (662)
Q Consensus 461 gl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~--~~d~~lv-ivG~g~~--~~~~----~~---~~l~~~~-~~~~~~ 527 (662)
+.. ++.++|+|+||+.+.||++.|++|++.+. .++.+++ ++|+|+. .++. .. ..+.... -...+.
T Consensus 243 ~~~--~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~ 320 (439)
T TIGR02472 243 LKD--PEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVA 320 (439)
T ss_pred ccc--cCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEE
Confidence 444 56789999999999999999999998642 2234444 5687742 1111 11 1111111 112233
Q ss_pred EcCC-ChHHHHHHHHhc----CEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECC
Q 006091 528 WVGF-NVPISHRITAGC----DILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLP 602 (662)
Q Consensus 528 ~~~~-~~~~~~~ll~~a----Di~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~ 602 (662)
+.++ ..+++..+|+.| |++|+||.+|+||++++||||||+|||+|+.||++|++.+ +.+|+++++
T Consensus 321 f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~----------~~~G~lv~~ 390 (439)
T TIGR02472 321 YPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIAN----------CRNGLLVDV 390 (439)
T ss_pred ecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcC----------CCcEEEeCC
Confidence 4443 456677899877 9999999999999999999999999999999999999998 889999999
Q ss_pred CCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH---HHhcCCHHHHHHHHHHHHH
Q 006091 603 LSEESMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFE 652 (662)
Q Consensus 603 ~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~---~~~~fs~e~~a~~~~~iy~ 652 (662)
.|+++++++|.++++ +++.++++++++ +.++|||+.++++|+++++
T Consensus 391 ~d~~~la~~i~~ll~----~~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 391 LDLEAIASALEDALS----DSSQWQLWSRNGIEGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred CCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999999999987 788888888887 4689999999999998863
No 11
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=1.7e-38 Score=347.68 Aligned_cols=387 Identities=18% Similarity=0.204 Sum_probs=270.8
Q ss_pred EEEEeecccCcc-----ccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEE
Q 006091 154 IVFVTAEAAPYS-----KTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAF 228 (662)
Q Consensus 154 Il~vs~~~~P~~-----~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 228 (662)
|++++....|.. ..||+++++.+|+++|+++||+|+|+|+....... .
T Consensus 1 ~~~~~~~~~~~~~~~~~~~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~--~------------------------- 53 (405)
T TIGR03449 1 VAMISMHTSPLQQPGTGDAGGMNVYILETATELARRGIEVDIFTRATRPSQP--P------------------------- 53 (405)
T ss_pred CeEEeccCCccccCCCcCCCCceehHHHHHHHHhhCCCEEEEEecccCCCCC--C-------------------------
Confidence 577887777742 25999999999999999999999999976432110 0
Q ss_pred EEEeeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHh-hhccccCCCCCCCCCccEEEeCCCCcchHHHH
Q 006091 229 FHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAAC-EAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVL 307 (662)
Q Consensus 229 ~~~~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~-~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~l 307 (662)
..+..+|+.+++++...+.... .......+..|..... ...... ..+|||||+|.+..++++.+
T Consensus 54 ~~~~~~~~~v~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~------~~~~Diih~h~~~~~~~~~~ 118 (405)
T TIGR03449 54 VVEVAPGVRVRNVVAGPYEGLD---------KEDLPTQLCAFTGGVLRAEARHE------PGYYDLIHSHYWLSGQVGWL 118 (405)
T ss_pred ccccCCCcEEEEecCCCcccCC---------HHHHHHHHHHHHHHHHHHHhhcc------CCCCCeEEechHHHHHHHHH
Confidence 0122368888877543322100 0000011111222222 111111 12699999999877776666
Q ss_pred HHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEE
Q 006091 308 LASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLL 387 (662)
Q Consensus 308 l~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii 387 (662)
++.. .++|+|+|+|+... .....+. .+ .. ........+++..+..+|.++
T Consensus 119 ~~~~-------~~~p~v~t~h~~~~--------~~~~~~~-~~----~~----------~~~~~~~~~e~~~~~~~d~vi 168 (405)
T TIGR03449 119 LRDR-------WGVPLVHTAHTLAA--------VKNAALA-DG----DT----------PEPEARRIGEQQLVDNADRLI 168 (405)
T ss_pred HHHh-------cCCCEEEeccchHH--------HHHHhcc-CC----CC----------CchHHHHHHHHHHHHhcCeEE
Confidence 6543 47999999997521 0000000 00 00 000011223466788999999
Q ss_pred ecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCC
Q 006091 388 TVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPD 467 (662)
Q Consensus 388 ~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~ 467 (662)
++|+...+.+. ..++....++.+||||+|.+.|.+.. +...+++++++ ++
T Consensus 169 ~~s~~~~~~~~---------~~~~~~~~ki~vi~ngvd~~~~~~~~-------------------~~~~~~~~~~~--~~ 218 (405)
T TIGR03449 169 ANTDEEARDLV---------RHYDADPDRIDVVAPGADLERFRPGD-------------------RATERARLGLP--LD 218 (405)
T ss_pred ECCHHHHHHHH---------HHcCCChhhEEEECCCcCHHHcCCCc-------------------HHHHHHhcCCC--CC
Confidence 99998777664 22344567899999999998876543 34567788876 67
Q ss_pred CCEEEEEecCCCccCHHHHHHHHHhccC--CC--eEEEEEeCCCh---hhHHHHHHHHhhcC-CcEEEEcCC-ChHHHHH
Q 006091 468 CPLIGFIGRLDYQKGIDLIRLAAPEILA--DD--IQFVMLGSGDP---QFESWMRDTEATYK-DKYRGWVGF-NVPISHR 538 (662)
Q Consensus 468 ~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d--~~lvivG~g~~---~~~~~~~~l~~~~~-~~~~~~~~~-~~~~~~~ 538 (662)
+++|+|+||+.+.||++.+++|++.+.+ ++ ++|+++|++.. ...+.++.+.+... ...+.+.|+ +.+++..
T Consensus 219 ~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~ 298 (405)
T TIGR03449 219 TKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVH 298 (405)
T ss_pred CcEEEEecCCCcccCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHHHH
Confidence 7899999999999999999999998854 34 99999996421 12233333333322 223334444 4566779
Q ss_pred HHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHH
Q 006091 539 ITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 618 (662)
Q Consensus 539 ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~ 618 (662)
+|+.||++++||..|+||++++|||++|+|||+++.||.+|++.+ +.+|+++++.|+++++++|.++++
T Consensus 299 ~l~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~----------~~~g~~~~~~d~~~la~~i~~~l~- 367 (405)
T TIGR03449 299 VYRAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVAD----------GETGLLVDGHDPADWADALARLLD- 367 (405)
T ss_pred HHHhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhcc----------CCceEECCCCCHHHHHHHHHHHHh-
Confidence 999999999999999999999999999999999999999999988 889999999999999999999987
Q ss_pred hhhCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHhhh
Q 006091 619 YREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWASI 656 (662)
Q Consensus 619 ~~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy~~~~~ 656 (662)
+++.+.+++.++ ..++|+|+.++++|+++|++++.
T Consensus 368 ---~~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~~~ 404 (405)
T TIGR03449 368 ---DPRTRIRMGAAAVEHAAGFSWAATADGLLSSYRDALA 404 (405)
T ss_pred ---CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 788888888776 34789999999999999998764
No 12
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=2.6e-38 Score=347.52 Aligned_cols=394 Identities=19% Similarity=0.169 Sum_probs=271.5
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec--CCCCCCcccchhhhcccCceeEEeecCCceEEEEE
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR--YFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 229 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 229 (662)
|||++|+..|+|. .||++.++.+|+++|.++||+|+|+|+. ++.... ...+. .....
T Consensus 1 mkIlii~~~~~P~--~~g~~~~~~~l~~~L~~~G~~V~vit~~~~~~~~~~-~~~~~------------------~~~~~ 59 (412)
T PRK10307 1 MKILVYGINYAPE--LTGIGKYTGEMAEWLAARGHEVRVITAPPYYPQWRV-GEGYS------------------AWRYR 59 (412)
T ss_pred CeEEEEecCCCCC--ccchhhhHHHHHHHHHHCCCeEEEEecCCCCCCCCC-Ccccc------------------cccce
Confidence 8999999988886 6999999999999999999999999965 222110 00000 00011
Q ss_pred EEeeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhc-cccCCCCCCCCCccEEEeCCCCc--chHHH
Q 006091 230 HEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAP-LVLPLGGFTYGEKCIFLVNDWHA--GLVPV 306 (662)
Q Consensus 230 ~~~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~~f~~~~pDVVh~h~~~~--~l~~~ 306 (662)
.+..+|+++++++....... . .......+..|........ +.. ..+|||||+|.+.. ...+.
T Consensus 60 ~~~~~~i~v~r~~~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~~~~------~~~~Div~~~~p~~~~~~~~~ 124 (412)
T PRK10307 60 RESEGGVTVWRCPLYVPKQP---S------GLKRLLHLGSFALSSFFPLLAQR------RWRPDRVIGVVPTLFCAPGAR 124 (412)
T ss_pred eeecCCeEEEEccccCCCCc---c------HHHHHHHHHHHHHHHHHHHhhcc------CCCCCEEEEeCCcHHHHHHHH
Confidence 23457899988864321110 0 0011122222222222211 111 12799999997543 23333
Q ss_pred HHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCC-hhhhccccccccccccccccCcchhhhHHHHHHHhcCE
Q 006091 307 LLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLP-SEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADR 385 (662)
Q Consensus 307 ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ 385 (662)
+++.+ .++|+|+++|+.. +.... ..+.. ..++. .....+++.+++.+|.
T Consensus 125 ~~~~~-------~~~~~v~~~~d~~-----~~~~~-~~~~~~~~~~~-----------------~~~~~~~~~~~~~ad~ 174 (412)
T PRK10307 125 LLARL-------SGARTWLHIQDYE-----VDAAF-GLGLLKGGKVA-----------------RLATAFERSLLRRFDN 174 (412)
T ss_pred HHHHh-------hCCCEEEEeccCC-----HHHHH-HhCCccCcHHH-----------------HHHHHHHHHHHhhCCE
Confidence 44433 4789999999753 11111 11110 00000 1122467788899999
Q ss_pred EEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCC
Q 006091 386 LLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIR 465 (662)
Q Consensus 386 ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~ 465 (662)
|+++|+..++.+.+ .+.+..++.+||||+|.+.|.+.... ....++++++++
T Consensus 175 ii~~S~~~~~~~~~----------~~~~~~~i~vi~ngvd~~~~~~~~~~----------------~~~~~~~~~~~~-- 226 (412)
T PRK10307 175 VSTISRSMMNKARE----------KGVAAEKVIFFPNWSEVARFQPVADA----------------DVDALRAQLGLP-- 226 (412)
T ss_pred EEecCHHHHHHHHH----------cCCCcccEEEECCCcCHhhcCCCCcc----------------chHHHHHHcCCC--
Confidence 99999999887752 23456789999999998887654321 023577888887
Q ss_pred CCCCEEEEEecCCCccCHHHHHHHHHhccC-CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCC-ChHHHHHHHHhc
Q 006091 466 PDCPLIGFIGRLDYQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGC 543 (662)
Q Consensus 466 ~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~-~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~ll~~a 543 (662)
++.++|+|+|++.+.||++.|++|++.+.+ ++++|+|+|+|+ ..+.+.+.++.....+ +.+.|+ +.+.+..+|+.|
T Consensus 227 ~~~~~i~~~G~l~~~kg~~~li~a~~~l~~~~~~~l~ivG~g~-~~~~l~~~~~~~~l~~-v~f~G~~~~~~~~~~~~~a 304 (412)
T PRK10307 227 DGKKIVLYSGNIGEKQGLELVIDAARRLRDRPDLIFVICGQGG-GKARLEKMAQCRGLPN-VHFLPLQPYDRLPALLKMA 304 (412)
T ss_pred CCCEEEEEcCccccccCHHHHHHHHHHhccCCCeEEEEECCCh-hHHHHHHHHHHcCCCc-eEEeCCCCHHHHHHHHHhc
Confidence 567899999999999999999999998855 479999999995 3333333333222222 334444 556778999999
Q ss_pred CEEEEcCCCCC----CcHHHHHHHHcCCcEEEeCCcc--cccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 544 DILLMPSRFEP----CGLNQLYAMRYGTIPVVHATGG--LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 544 Di~v~PS~~E~----fgl~~lEAma~G~PvVas~~gg--~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
|++++||..|+ +|.+++|||+||+|||+|+.+| +.+++. ++|++++++|+++++++|.++++
T Consensus 305 Di~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~------------~~G~~~~~~d~~~la~~i~~l~~ 372 (412)
T PRK10307 305 DCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE------------GIGVCVEPESVEALVAAIAALAR 372 (412)
T ss_pred CEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh------------CCcEEeCCCCHHHHHHHHHHHHh
Confidence 99999999987 5778899999999999999876 457664 38999999999999999999887
Q ss_pred HhhhCHHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHhhhC
Q 006091 618 TYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEWASID 657 (662)
Q Consensus 618 ~~~~~~~~~~~l~~~~---~~~~fs~e~~a~~~~~iy~~~~~~ 657 (662)
+++++.+|++++ +.++|||+.++++|+++|++++++
T Consensus 373 ----~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 411 (412)
T PRK10307 373 ----QALLRPKLGTVAREYAERTLDKENVLRQFIADIRGLVAE 411 (412)
T ss_pred ----CHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcC
Confidence 788888998887 357899999999999999998875
No 13
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=1.9e-38 Score=344.71 Aligned_cols=372 Identities=22% Similarity=0.220 Sum_probs=263.9
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEE
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 231 (662)
|||++|+..|+|. ..||.++++.+|+++|+++ |+|.|++..... .
T Consensus 1 mkI~~i~~~~~p~-~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~---------------------------------~ 45 (388)
T TIGR02149 1 MKVTVLTREYPPN-VYGGAGVHVEELTRELARL-MDVDVRCFGDQR---------------------------------F 45 (388)
T ss_pred CeeEEEecccCcc-ccccHhHHHHHHHHHHHHh-cCeeEEcCCCch---------------------------------h
Confidence 8999999988874 3699999999999999998 888888754211 0
Q ss_pred eeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHhh
Q 006091 232 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 311 (662)
Q Consensus 232 ~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~ 311 (662)
..++++++.+........ + ...... +....... .. ..+|||||+|.+...+.+.+++..
T Consensus 46 ~~~~~~~~~~~~~~~~~~---~-------~~~~~~---~~~~~~~~-~~-------~~~~divh~~~~~~~~~~~~~~~~ 104 (388)
T TIGR02149 46 DSEGLTVKGYRPWSELKE---A-------NKALGT---FSVDLAMA-ND-------PVDADVVHSHTWYTFLAGHLAKKL 104 (388)
T ss_pred cCCCeEEEEecChhhccc---h-------hhhhhh---hhHHHHHh-hC-------CCCCCeEeecchhhhhHHHHHHHh
Confidence 124556555532211000 0 000111 11111100 00 125899999998877665554432
Q ss_pred cCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCc
Q 006091 312 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 391 (662)
Q Consensus 312 ~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~ 391 (662)
.++|+|+++|+......+... ..... + .....+++.++..+|.++++|+
T Consensus 105 -------~~~p~v~~~h~~~~~~~~~~~---~~~~~----------~-----------~~~~~~~~~~~~~ad~vi~~S~ 153 (388)
T TIGR02149 105 -------YDKPLVVTAHSLEPLRPWKEE---QLGGG----------Y-----------KLSSWAEKTAIEAADRVIAVSG 153 (388)
T ss_pred -------cCCCEEEEeeccccccccccc---ccccc----------h-----------hHHHHHHHHHHhhCCEEEEccH
Confidence 589999999986321110000 00000 0 0112345677889999999999
Q ss_pred chhhhhhcccCCcchhhhh-ccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCE
Q 006091 392 GYSWEITTVEGGYGLHEIL-SSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 470 (662)
Q Consensus 392 ~~~~~i~~~~~~~~l~~~~-~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~ 470 (662)
.+++.+.. .+ +....++.+||||+|...+.+.. +..++++++++ ++.++
T Consensus 154 ~~~~~~~~---------~~~~~~~~~i~vi~ng~~~~~~~~~~-------------------~~~~~~~~~~~--~~~~~ 203 (388)
T TIGR02149 154 GMREDILK---------YYPDLDPEKVHVIYNGIDTKEYKPDD-------------------GNVVLDRYGID--RSRPY 203 (388)
T ss_pred HHHHHHHH---------HcCCCCcceEEEecCCCChhhcCCCc-------------------hHHHHHHhCCC--CCceE
Confidence 98887752 22 34467899999999988876543 34577888887 67789
Q ss_pred EEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCCh--hhHHHHHHHHhhcC---CcEEEEcC-CChHHHHHHHHhcC
Q 006091 471 IGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDP--QFESWMRDTEATYK---DKYRGWVG-FNVPISHRITAGCD 544 (662)
Q Consensus 471 Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~--~~~~~~~~l~~~~~---~~~~~~~~-~~~~~~~~ll~~aD 544 (662)
|+|+||+.+.||++.|++|++++. ++++++++|+|+. .+.+.++....... .++..+.+ .+.+++..+|+.||
T Consensus 204 i~~~Grl~~~Kg~~~li~a~~~l~-~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aD 282 (388)
T TIGR02149 204 ILFVGRITRQKGVPHLLDAVHYIP-KDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAE 282 (388)
T ss_pred EEEEcccccccCHHHHHHHHHHHh-hcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCC
Confidence 999999999999999999999884 4789999987642 22233333322221 12333333 25666789999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCH------HHHHHHHHHHHHH
Q 006091 545 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSE------ESMLTALRFAIRT 618 (662)
Q Consensus 545 i~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~------~~la~aI~~~l~~ 618 (662)
++++||.+|++|++++|||+||+|||+++.||++|++.+ +.+|+++++.|+ ++++++|.++++
T Consensus 283 v~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~----------~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~- 351 (388)
T TIGR02149 283 VFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVD----------GETGFLVPPDNSDADGFQAELAKAINILLA- 351 (388)
T ss_pred EEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhC----------CCceEEcCCCCCcccchHHHHHHHHHHHHh-
Confidence 999999999999999999999999999999999999998 889999999888 888888888876
Q ss_pred hhhCHHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHhh
Q 006091 619 YREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEWAS 655 (662)
Q Consensus 619 ~~~~~~~~~~l~~~~---~~~~fs~e~~a~~~~~iy~~~~ 655 (662)
+++.+++++.++ ..++|+|+.++++|.++|++++
T Consensus 352 ---~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~~ 388 (388)
T TIGR02149 352 ---DPELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKVL 388 (388)
T ss_pred ---CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhC
Confidence 888888888877 3578999999999999999864
No 14
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=3.1e-38 Score=365.80 Aligned_cols=455 Identities=15% Similarity=0.110 Sum_probs=285.9
Q ss_pred ccCCceeEEEEeecccCc---------cccCcHHHHHhhHHHHHHhCC--CcEEEEeecCCCCCCcccchhhhcccCcee
Q 006091 147 QTRVSYNIVFVTAEAAPY---------SKTGGLGDVCGSLPVALAARG--HRVMVVSPRYFNGTAADENFTLAKDLGCCM 215 (662)
Q Consensus 147 ~~~~~MkIl~vs~~~~P~---------~~~GG~~~~~~~La~~L~~~G--heV~Vit~~~~~~~~~~~~~~~~~~~~~~~ 215 (662)
+..++|.|++|+.+..|- ..+||+.+|+.+||++|+++| |+|+|+|-...... .+..|....+.....
T Consensus 165 ~~~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~-~~~~y~~p~e~~~~~ 243 (1050)
T TIGR02468 165 QKEKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPD-VDWSYGEPTEMLTPR 243 (1050)
T ss_pred cccCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccc-cccccCCcccccccc
Confidence 345789999999986542 358999999999999999998 89999997753211 112232221110000
Q ss_pred EEeecCCceEEEEEEEeeCCceEEEEeCCC---CCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccc----c--CCCCC
Q 006091 216 KICCFGGEQEIAFFHEYREGVDWVFVDHPS---YHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLV----L--PLGGF 286 (662)
Q Consensus 216 ~v~~~~~~~~~~~~~~~~~gv~v~~i~~~~---~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~----~--~~~~f 286 (662)
.. ..........+|+.+++++..+ |..+.. -+.....|...+...+.. + ...+-
T Consensus 244 ~~------~~~~~~~~~~~g~rIvRip~GP~~~~l~Ke~-----------L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~ 306 (1050)
T TIGR02468 244 SS------ENDGDEMGESSGAYIIRIPFGPRDKYIPKEE-----------LWPYIPEFVDGALSHIVNMSKVLGEQIGSG 306 (1050)
T ss_pred cc------ccccccccCCCCeEEEEeccCCCCCCcCHHH-----------HHHHHHHHHHHHHHHHHhhhhhhhhhhccc
Confidence 00 0000001123588998887543 222111 112223333333332211 0 00000
Q ss_pred CCCCccEEEeCCCCcchHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccc
Q 006091 287 TYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHA 366 (662)
Q Consensus 287 ~~~~pDVVh~h~~~~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 366 (662)
+...|||||+|+|.+++++..++.. .++|+|+|.|++..... ......|... .......|
T Consensus 307 ~~~~pDvIHaHyw~sG~aa~~L~~~-------lgVP~V~T~HSLgr~K~---~~ll~~g~~~--~~~~~~~y-------- 366 (1050)
T TIGR02468 307 HPVWPYVIHGHYADAGDSAALLSGA-------LNVPMVLTGHSLGRDKL---EQLLKQGRMS--KEEINSTY-------- 366 (1050)
T ss_pred cCCCCCEEEECcchHHHHHHHHHHh-------hCCCEEEECccchhhhh---hhhccccccc--cccccccc--------
Confidence 1113899999999999999999876 48999999998631110 0000001000 00000000
Q ss_pred cCcchhhhHHHHHHHhcCEEEecCcchhhhhhcccCC--cchhhh-----------hccCCCceeEecCCCCCCCCCCCC
Q 006091 367 LDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGG--YGLHEI-----------LSSRKSVLNGITNGIDITEWNPSS 433 (662)
Q Consensus 367 ~~~~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~--~~l~~~-----------~~~~~~ki~vIpnGvd~~~~~~~~ 433 (662)
.....+..+..++..||.||++|....+++..-..+ ..+.+. ++....++.|||||||+..|.|..
T Consensus 367 -~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~ 445 (1050)
T TIGR02468 367 -KIMRRIEAEELSLDASEIVITSTRQEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHD 445 (1050)
T ss_pred -chHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCC
Confidence 113445678889999999999999888765321100 000000 111234899999999999998754
Q ss_pred chhhcccCcccccchhH--HhHHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC----CCeEEEEEeCCC
Q 006091 434 DEHIASHYSIDDLSGKV--QCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA----DDIQFVMLGSGD 507 (662)
Q Consensus 434 ~~~i~~~~~~~~~~~~~--~~k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~----~d~~lvivG~g~ 507 (662)
...-......++...+. .....++. +..+ +++++|+|+||+.++||++.|++|+..+.. .++. +|+|+++
T Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~l~r-~~~~--pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gd 521 (1050)
T TIGR02468 446 GDMDGETEGNEEHPAKPDPPIWSEIMR-FFTN--PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRD 521 (1050)
T ss_pred ccccchhcccccccccccchhhHHHHh-hccc--CCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCc
Confidence 22100000000000000 00112333 3334 678999999999999999999999999853 2555 4668764
Q ss_pred hh--h-------HHHHHHHHhhc-CCcEEEEcCC-ChHHHHHHHHhc----CEEEEcCCCCCCcHHHHHHHHcCCcEEEe
Q 006091 508 PQ--F-------ESWMRDTEATY-KDKYRGWVGF-NVPISHRITAGC----DILLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (662)
Q Consensus 508 ~~--~-------~~~~~~l~~~~-~~~~~~~~~~-~~~~~~~ll~~a----Di~v~PS~~E~fgl~~lEAma~G~PvVas 572 (662)
.. + ...+..+.... ....+.+.++ +.+.+..+|..| |+||+||.+|+||++++||||||+|||+|
T Consensus 522 d~d~l~~~~~~~l~~L~~li~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVAS 601 (1050)
T TIGR02468 522 DIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVAT 601 (1050)
T ss_pred hhhhhhccchHHHHHHHHHHHHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEe
Confidence 21 0 11122222222 2233345554 456677899877 69999999999999999999999999999
Q ss_pred CCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH--HhcCCHHHHHHHHHHH
Q 006091 573 ATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM--EKDYTWENAAIQYEQV 650 (662)
Q Consensus 573 ~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~~--~~~fs~e~~a~~~~~i 650 (662)
+.||+.|+|.+ +.+|++|++.|+++++++|..++. +++++++|+.++. .++|+|+.++++|++.
T Consensus 602 dvGG~~EII~~----------g~nGlLVdP~D~eaLA~AL~~LL~----Dpelr~~m~~~gr~~v~~FSWe~ia~~yl~~ 667 (1050)
T TIGR02468 602 KNGGPVDIHRV----------LDNGLLVDPHDQQAIADALLKLVA----DKQLWAECRQNGLKNIHLFSWPEHCKTYLSR 667 (1050)
T ss_pred CCCCcHHHhcc----------CCcEEEECCCCHHHHHHHHHHHhh----CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 99999999998 899999999999999999999987 8999999998873 4679999999999999
Q ss_pred HHHhhhCC
Q 006091 651 FEWASIDP 658 (662)
Q Consensus 651 y~~~~~~~ 658 (662)
|..+....
T Consensus 668 i~~~~~~~ 675 (1050)
T TIGR02468 668 IASCRPRH 675 (1050)
T ss_pred HHHHhccC
Confidence 99876543
No 15
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=2.4e-38 Score=360.61 Aligned_cols=436 Identities=17% Similarity=0.161 Sum_probs=273.4
Q ss_pred CceeEEEEeeccc----Cc---cccCcHHHHHhhHHHHH--------HhCCC----cEEEEeecCCCCCCcccchhhhcc
Q 006091 150 VSYNIVFVTAEAA----PY---SKTGGLGDVCGSLPVAL--------AARGH----RVMVVSPRYFNGTAADENFTLAKD 210 (662)
Q Consensus 150 ~~MkIl~vs~~~~----P~---~~~GG~~~~~~~La~~L--------~~~Gh----eV~Vit~~~~~~~~~~~~~~~~~~ 210 (662)
..|||++|+.+.+ |. ..+||..+|+.++|++| +++|| +|+|+|-..+.... ..+..
T Consensus 254 ~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~--~~~~~--- 328 (784)
T TIGR02470 254 MVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEG--TTCNQ--- 328 (784)
T ss_pred ccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCccc--ccccc---
Confidence 4589999999872 21 13799999999999985 68999 77799977643211 00000
Q ss_pred cCceeEEeecCCceEEEEEEEeeCCceEEEEeCCCCCCCCCCCCCCCCCCCchh---HHHHHHHHHHhhhccccCCCCCC
Q 006091 211 LGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQ---FRYTLLCYAACEAPLVLPLGGFT 287 (662)
Q Consensus 211 ~~~~~~v~~~~~~~~~~~~~~~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~---~~~~~~~~a~~~~~~~~~~~~f~ 287 (662)
... .....+++.+++++...... ..- ..|+... -....|...+.+.+... +
T Consensus 329 --------------~~e-~~~~~~~~~I~rvp~g~~~~---~~~---~~~i~k~~l~p~l~~f~~~~~~~~~~~----~- 382 (784)
T TIGR02470 329 --------------RLE-KVYGTEHAWILRVPFRTENG---IIL---RNWISRFEIWPYLETFAEDAEKEILAE----L- 382 (784)
T ss_pred --------------ccc-cccCCCceEEEEecCCCCcc---ccc---ccccCHHHHHHHHHHHHHHHHHHHHHh----c-
Confidence 000 01123577787776433110 000 0111111 12223333333322111 0
Q ss_pred CCCccEEEeCCCCcchHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhcccccccccccccccc
Q 006091 288 YGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHAL 367 (662)
Q Consensus 288 ~~~pDVVh~h~~~~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 367 (662)
..+||+||+|.|.+++++.+++.+ .++|.+.|.|.+..... ...+. .| ......|
T Consensus 383 ~~~pDlIHahy~d~glva~lla~~-------lgVP~v~t~HsL~~~K~------~~~g~--~~-~~~e~~~--------- 437 (784)
T TIGR02470 383 QGKPDLIIGNYSDGNLVASLLARK-------LGVTQCTIAHALEKTKY------PDSDI--YW-QEFEDKY--------- 437 (784)
T ss_pred CCCCCEEEECCCchHHHHHHHHHh-------cCCCEEEECCcchhhcc------ccccc--cc-ccchhHH---------
Confidence 136999999999999999888876 48999999998732110 00110 00 0000000
Q ss_pred CcchhhhHHHHHHHhcCEEEecCcchhhhhhcccCCcc---------hhh---hhccCCCceeEecCCCCCCCCCCCCch
Q 006091 368 DTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYG---------LHE---ILSSRKSVLNGITNGIDITEWNPSSDE 435 (662)
Q Consensus 368 ~~~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~---------l~~---~~~~~~~ki~vIpnGvd~~~~~~~~~~ 435 (662)
.....+.-...++..||.||+.|.............++ +.. -......|+.+||+|+|...|.|....
T Consensus 438 ~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~ 517 (784)
T TIGR02470 438 HFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDK 517 (784)
T ss_pred HhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCch
Confidence 00011122456788999999999533211100000111 111 112255799999999999988765432
Q ss_pred hhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhcc--CCCeEEEEEeCCCh-----
Q 006091 436 HIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEIL--ADDIQFVMLGSGDP----- 508 (662)
Q Consensus 436 ~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~--~~d~~lvivG~g~~----- 508 (662)
.....--.+......=++...++.+|+..++++++|+++||+++.||++.|++|+..+. .++++|+|+|++..
T Consensus 518 ~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~ 597 (784)
T TIGR02470 518 EKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESK 597 (784)
T ss_pred hhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEEEEeCCccccccc
Confidence 10000000000000112345567788755578899999999999999999999998764 34799999998642
Q ss_pred --h---hHHHHHHHHhhcC-CcEEEEcCC--ChHHHHHHHH----hcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcc
Q 006091 509 --Q---FESWMRDTEATYK-DKYRGWVGF--NVPISHRITA----GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG 576 (662)
Q Consensus 509 --~---~~~~~~~l~~~~~-~~~~~~~~~--~~~~~~~ll~----~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg 576 (662)
+ ....+..+..... ...+.|+|+ +.....++|. .+|+|++||.+|+||++++||||||+|||+|++||
T Consensus 598 d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG 677 (784)
T TIGR02470 598 DREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGG 677 (784)
T ss_pred chhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCC
Confidence 1 1112222333322 223345554 2222333443 45899999999999999999999999999999999
Q ss_pred cccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH---HhcCCHHHHHHHHHHHH
Q 006091 577 LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM---EKDYTWENAAIQYEQVF 651 (662)
Q Consensus 577 ~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~~---~~~fs~e~~a~~~~~iy 651 (662)
++|+|.+ +.+|+++++.|+++++++|.++++.+..|++.|.+++.+++ .++|||+.++++++++.
T Consensus 678 ~~EiV~d----------g~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 678 PLEIIQD----------GVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred HHHHhcC----------CCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999999 89999999999999999999998655568999999999884 57999999999998875
No 16
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=100.00 E-value=4.6e-38 Score=354.11 Aligned_cols=467 Identities=19% Similarity=0.241 Sum_probs=361.6
Q ss_pred EEEEeecc-----cCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccch----h----hhcc-------c--
Q 006091 154 IVFVTAEA-----APYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENF----T----LAKD-------L-- 211 (662)
Q Consensus 154 Il~vs~~~-----~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~----~----~~~~-------~-- 211 (662)
|+++|.|| .| ...||+|+.+.+..++++..|...+.++..|..+...+..- + ..++ .
T Consensus 1 ~ayf~~E~g~~~~~p-~ysGGLG~LAgd~l~saa~l~~p~~g~gl~Y~~Gyf~Q~i~~~g~Q~e~~~~~~~~~~p~~~~~ 79 (601)
T TIGR02094 1 VAYFSMEYGLHESLP-IYSGGLGVLAGDHLKSASDLGLPLVAVGLLYKQGYFRQRLDEDGWQQEAYPNNDFESLPIEKVL 79 (601)
T ss_pred CeEEeeccccCCCCC-ccCchHHHHHHHHHHHHHhCCCCeEEEEeccCCCceeEEECCCCceeecCCccccCCCceEEEe
Confidence 45566553 34 34899999999999999999999999999887765543221 0 1110 0
Q ss_pred -----CceeEEeecCCceEEEEEEEeeCCceEEEEeCCC-----CCCCC--CCCCCCCCCCCchhHHHHHHHHHHhhhcc
Q 006091 212 -----GCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPS-----YHRPG--NPYGDINGAFGDNQFRYTLLCYAACEAPL 279 (662)
Q Consensus 212 -----~~~~~v~~~~~~~~~~~~~~~~~gv~v~~i~~~~-----~~~~~--~~y~~~~~~~~~~~~~~~~~~~a~~~~~~ 279 (662)
...+.+++.|......+|....+++++++++.+. +.+.. .+|+. +...++.++..|+.+.++.++
T Consensus 80 ~~~g~~~~~~v~i~g~~~~~rlw~~~~~~v~lylld~~~~~n~~~~R~it~~LY~~---D~~~R~~Qe~fl~~a~l~~l~ 156 (601)
T TIGR02094 80 DTDGKWLKISVRIRGRDVYAKVWRVQVGRVPLYLLDTNIPENSEDDRWITGRLYGG---DKEMRIAQEIVLGIGGVRALR 156 (601)
T ss_pred cCCCCeEEEEEecCCcEEEEEEEEEEeCCCCEEEecCCCcccchhhcCccCCCCCC---CHHHHHHHHHHHHHHHHHHHH
Confidence 1146677788888888998888899999999774 33332 35652 234555666999999988875
Q ss_pred ccCCCCCCCCCccEEEeCCCCcchHHHHHHhhcCCCC-----CC--CCCcEEEEecCCCCCCC--CChhhhh--------
Q 006091 280 VLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHG-----VY--KDARSILVIHNLSHQGV--EPAATYK-------- 342 (662)
Q Consensus 280 ~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~~~~~~-----~~--~gip~v~tiH~~~~~~~--~~~~~~~-------- 342 (662)
.+ ++ +|||||+|+||++++++.+.+..-..+ .+ ...++++|+|++.++|. |+...+.
T Consensus 157 ~l---~~---~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~ 230 (601)
T TIGR02094 157 AL---GI---DPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAA 230 (601)
T ss_pred Hc---CC---CceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhh
Confidence 54 23 899999999999999988643210000 00 14779999999999997 8876663
Q ss_pred hcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecC
Q 006091 343 NLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITN 422 (662)
Q Consensus 343 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpn 422 (662)
.++++.+.+......++. ....++|++.++..|+.|.+||+.+.+.... .. ..+...+.....++..|.|
T Consensus 231 ~~gl~~~~~~~~~~~~~~--------~~~~vnm~~lai~~S~~vngVS~lh~~v~~~-l~-~~l~~~~~~~~~~i~gItN 300 (601)
T TIGR02094 231 NLGLPREQLLALGRENPD--------DPEPFNMTVLALRLSRIANGVSKLHGEVSRK-MW-QFLYPGYEEEEVPIGYVTN 300 (601)
T ss_pred HhCCCHHHHHhhhhhccC--------ccCceeHHHHHHHhCCeeeeecHHHHHHHHH-HH-HhhhhhcccccCCccceeC
Confidence 356666555444333210 0245899999999999999999988873321 11 1122333444567999999
Q ss_pred CCCCCCCCCCCchhhcccCcccc---------------------c-chhHHhHHHHHH---------------------H
Q 006091 423 GIDITEWNPSSDEHIASHYSIDD---------------------L-SGKVQCKIALQK---------------------E 459 (662)
Q Consensus 423 Gvd~~~~~~~~~~~i~~~~~~~~---------------------~-~~~~~~k~~~r~---------------------~ 459 (662)
|||+..|.+.....+..+|..++ + ..|..||.++++ +
T Consensus 301 GId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~ 380 (601)
T TIGR02094 301 GVHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMA 380 (601)
T ss_pred CccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhh
Confidence 99999999999988988888766 3 789999999888 5
Q ss_pred hCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC------CCeEEEEEeCCChh------hHHHHHHHHhh--cCCcE
Q 006091 460 LGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA------DDIQFVMLGSGDPQ------FESWMRDTEAT--YKDKY 525 (662)
Q Consensus 460 lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~------~d~~lvivG~g~~~------~~~~~~~l~~~--~~~~~ 525 (662)
+|++.+++.++|++++|+..+||++++++++.++.+ .+++||+.|.+.|. +.+.+..++.. .+.++
T Consensus 381 ~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv 460 (601)
T TIGR02094 381 TDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRI 460 (601)
T ss_pred hccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCCE
Confidence 777788899999999999999999999999988852 48999999999865 67777777776 66789
Q ss_pred EEEcCCChHHHHHHHHhcCEEEE-cCC-CCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEEC--
Q 006091 526 RGWVGFNVPISHRITAGCDILLM-PSR-FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFL-- 601 (662)
Q Consensus 526 ~~~~~~~~~~~~~ll~~aDi~v~-PS~-~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~-- 601 (662)
....+|+....+.++++||++++ ||+ +|+||++.|-||..|.+.+++--|...|.. + +.|||.|.
T Consensus 461 ~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~----------~~nGf~f~~~ 529 (601)
T TIGR02094 461 VFLENYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-D----------GDNGWAIGDG 529 (601)
T ss_pred EEEcCCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-C----------CCcEEEECCC
Confidence 99999999999999999999999 999 999999999999999999999888887776 4 58999998
Q ss_pred ----------CCCHHHHHHHHHHHH-HHhhhC-----HHHHHHHHHHHHHh---cCCHHHHHHHHHHHH
Q 006091 602 ----------PLSEESMLTALRFAI-RTYREH-----KSSWEGLMRRGMEK---DYTWENAAIQYEQVF 651 (662)
Q Consensus 602 ----------~~d~~~la~aI~~~l-~~~~~~-----~~~~~~l~~~~~~~---~fs~e~~a~~~~~iy 651 (662)
..|.++|.++|++.+ ..+.++ |..|.+++++++.. .|||++++++|.+.|
T Consensus 530 ~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 530 EEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred ccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 489999999998887 556554 56799999999877 799999999999987
No 17
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=8.5e-38 Score=341.92 Aligned_cols=365 Identities=20% Similarity=0.219 Sum_probs=250.2
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEe
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 232 (662)
||++|+..+.|. .||.++++.+|+++|+++||+|.|+|+.++.... ....
T Consensus 1 kI~~v~~~~~p~--~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~----------------------------~~~~ 50 (398)
T cd03796 1 RICMVSDFFYPN--LGGVETHIYQLSQCLIKRGHKVVVITHAYGNRVG----------------------------IRYL 50 (398)
T ss_pred CeeEEeeccccc--cccHHHHHHHHHHHHHHcCCeeEEEeccCCcCCC----------------------------cccc
Confidence 799999999996 7999999999999999999999999976432100 0112
Q ss_pred eCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHH-HHHHhh
Q 006091 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVP-VLLASK 311 (662)
Q Consensus 233 ~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~-~ll~~~ 311 (662)
.++++++.++........... .... ....+.+.+. ..+|||||+|+....+.. .++..+
T Consensus 51 ~~~i~v~~~p~~~~~~~~~~~---------~~~~---~~~~l~~~~~--------~~~~DiIh~~~~~~~~~~~~~~~~~ 110 (398)
T cd03796 51 TNGLKVYYLPFVVFYNQSTLP---------TFFG---TFPLLRNILI--------RERITIVHGHQAFSALAHEALLHAR 110 (398)
T ss_pred cCceeEEEecceeccCCcccc---------chhh---hHHHHHHHHH--------hcCCCEEEECCCCchHHHHHHHHhh
Confidence 356777776543221110000 0101 1111112211 126999999987655432 222222
Q ss_pred cCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCc
Q 006091 312 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 391 (662)
Q Consensus 312 ~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~ 391 (662)
. .++|+|+|.|+... ... .... ....+++..++.+|.++++|+
T Consensus 111 ~------~~~~~v~t~h~~~~--~~~--------~~~~---------------------~~~~~~~~~~~~~d~ii~~s~ 153 (398)
T cd03796 111 T------MGLKTVFTDHSLFG--FAD--------ASSI---------------------HTNKLLRFSLADVDHVICVSH 153 (398)
T ss_pred h------cCCcEEEEeccccc--ccc--------hhhH---------------------HhhHHHHHhhccCCEEEEecH
Confidence 2 57999999997521 000 0000 011234566789999999999
Q ss_pred chhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEE
Q 006091 392 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 471 (662)
Q Consensus 392 ~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~I 471 (662)
...+.+.. ....+.+++.+||||+|...|.+.... .+ +++++|
T Consensus 154 ~~~~~~~~---------~~~~~~~k~~vi~ngvd~~~f~~~~~~--------------------------~~--~~~~~i 196 (398)
T cd03796 154 TSKENTVL---------RASLDPERVSVIPNAVDSSDFTPDPSK--------------------------RD--NDKITI 196 (398)
T ss_pred hHhhHHHH---------HhCCChhhEEEEcCccCHHHcCCCccc--------------------------CC--CCceEE
Confidence 88765421 122456789999999998877654321 01 467899
Q ss_pred EEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCC-ChHHHHHHHHhcCEEEE
Q 006091 472 GFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGCDILLM 548 (662)
Q Consensus 472 l~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~ll~~aDi~v~ 548 (662)
+++||+.+.||++.+++|++.+.+ ++++|+|+|+|+ ..+.+.+.+........+.+.|+ +.+++..+|+.||++++
T Consensus 197 ~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~-~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad~~v~ 275 (398)
T cd03796 197 VVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGP-KRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHIFLN 275 (398)
T ss_pred EEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCc-hHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCCEEEe
Confidence 999999999999999999998864 589999999985 33333333333222222233443 55667899999999999
Q ss_pred cCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHH
Q 006091 549 PSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEG 628 (662)
Q Consensus 549 PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~ 628 (662)
||..|+||++++|||+||+|||+++.||.+|++.+ + .+++++ .|+++++++|.+++.. ......
T Consensus 276 pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~----------~-~~~~~~-~~~~~l~~~l~~~l~~----~~~~~~ 339 (398)
T cd03796 276 TSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPP----------D-MILLAE-PDVESIVRKLEEAISI----LRTGKH 339 (398)
T ss_pred CChhhccCHHHHHHHHcCCCEEECCCCCchhheeC----------C-ceeecC-CCHHHHHHHHHHHHhC----hhhhhh
Confidence 99999999999999999999999999999999987 3 455544 5899999999999873 222222
Q ss_pred HHHH---HHHhcCCHHHHHHHHHHHHHHhhhCC
Q 006091 629 LMRR---GMEKDYTWENAAIQYEQVFEWASIDP 658 (662)
Q Consensus 629 l~~~---~~~~~fs~e~~a~~~~~iy~~~~~~~ 658 (662)
++.+ .+.++|||++++++|+++|++++...
T Consensus 340 ~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~~~ 372 (398)
T cd03796 340 DPWSFHNRVKKMYSWEDVAKRTEKVYDRILQTP 372 (398)
T ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHhcCC
Confidence 3232 36789999999999999999988654
No 18
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=5.4e-37 Score=330.72 Aligned_cols=367 Identities=21% Similarity=0.234 Sum_probs=257.6
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEE
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 231 (662)
|||++++. |. .||.++++.+++++|+++||+|+|+|...+.... .
T Consensus 1 mki~~~~~---p~--~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~~------------------------------~ 45 (371)
T cd04962 1 MKIGIVCY---PT--YGGSGVVATELGKALARRGHEVHFITSSRPFRLD------------------------------E 45 (371)
T ss_pred CceeEEEE---eC--CCCccchHHHHHHHHHhcCCceEEEecCCCcchh------------------------------h
Confidence 89999983 43 6999999999999999999999999865321100 0
Q ss_pred eeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHhh
Q 006091 232 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 311 (662)
Q Consensus 232 ~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~ 311 (662)
...++.++.++...+.. .. ...... .....+.+.+.. .+|||||+|.+.....+.++..+
T Consensus 46 ~~~~~~~~~~~~~~~~~----~~-------~~~~~~-~~~~~l~~~i~~--------~~~divh~~~~~~~~~~~~~~~~ 105 (371)
T cd04962 46 YSPNIFFHEVEVPQYPL----FQ-------YPPYDL-ALASKIAEVAKR--------YKLDLLHVHYAVPHAVAAYLARE 105 (371)
T ss_pred hccCeEEEEecccccch----hh-------cchhHH-HHHHHHHHHHhc--------CCccEEeecccCCccHHHHHHHH
Confidence 01122222222111100 00 000000 112222232222 27999999976655444444433
Q ss_pred cCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCc
Q 006091 312 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 391 (662)
Q Consensus 312 ~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~ 391 (662)
... ..++|+|+++|+..... .+.. .....+.+.+++.+|.++++|+
T Consensus 106 ~~~---~~~~~~i~~~h~~~~~~---------~~~~----------------------~~~~~~~~~~~~~~d~ii~~s~ 151 (371)
T cd04962 106 ILG---KKDLPVVTTLHGTDITL---------VGQD----------------------PSFQPATRFSIEKSDGVTAVSE 151 (371)
T ss_pred hcC---cCCCcEEEEEcCCcccc---------cccc----------------------ccchHHHHHHHhhCCEEEEcCH
Confidence 210 03799999999752110 0000 0112345677889999999999
Q ss_pred chhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEE
Q 006091 392 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 471 (662)
Q Consensus 392 ~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~I 471 (662)
...+.+.+ .+ ....++.+||||+|...+.+.. +...+++++++ ++.+++
T Consensus 152 ~~~~~~~~---------~~-~~~~~i~vi~n~~~~~~~~~~~-------------------~~~~~~~~~~~--~~~~~i 200 (371)
T cd04962 152 SLRQETYE---------LF-DITKEIEVIPNFVDEDRFRPKP-------------------DEALKRRLGAP--EGEKVL 200 (371)
T ss_pred HHHHHHHH---------hc-CCcCCEEEecCCcCHhhcCCCc-------------------hHHHHHhcCCC--CCCeEE
Confidence 98877642 12 2356899999999987665443 23355677766 677899
Q ss_pred EEEecCCCccCHHHHHHHHHhccCC-CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEEEcC
Q 006091 472 GFIGRLDYQKGIDLIRLAAPEILAD-DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPS 550 (662)
Q Consensus 472 l~vGrl~~~Kg~d~Ll~A~~~l~~~-d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~PS 550 (662)
+++||+.+.||++.+++|+..+.+. +++|+++|+|+ ......+..........+.+.++.+ .+..+|+.||++++||
T Consensus 201 l~~g~l~~~K~~~~li~a~~~l~~~~~~~l~i~G~g~-~~~~~~~~~~~~~~~~~v~~~g~~~-~~~~~~~~~d~~v~ps 278 (371)
T cd04962 201 IHISNFRPVKRIDDVIRIFAKVRKEVPARLLLVGDGP-ERSPAERLARELGLQDDVLFLGKQD-HVEELLSIADLFLLPS 278 (371)
T ss_pred EEecccccccCHHHHHHHHHHHHhcCCceEEEEcCCc-CHHHHHHHHHHcCCCceEEEecCcc-cHHHHHHhcCEEEeCC
Confidence 9999999999999999999998653 79999999995 2333333333222222234555544 4678999999999999
Q ss_pred CCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHH
Q 006091 551 RFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLM 630 (662)
Q Consensus 551 ~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~ 630 (662)
.+|+||++++|||++|+|||+++.||.+|++.+ +.+|+++++.|+++++++|..++. +++.+.+|+
T Consensus 279 ~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~----------~~~G~~~~~~~~~~l~~~i~~l~~----~~~~~~~~~ 344 (371)
T cd04962 279 EKESFGLAALEAMACGVPVVASNAGGIPEVVKH----------GETGFLVDVGDVEAMAEYALSLLE----DDELWQEFS 344 (371)
T ss_pred CcCCCccHHHHHHHcCCCEEEeCCCCchhhhcC----------CCceEEcCCCCHHHHHHHHHHHHh----CHHHHHHHH
Confidence 999999999999999999999999999999998 889999999999999999999886 888888888
Q ss_pred HHHH---HhcCCHHHHHHHHHHHHHHh
Q 006091 631 RRGM---EKDYTWENAAIQYEQVFEWA 654 (662)
Q Consensus 631 ~~~~---~~~fs~e~~a~~~~~iy~~~ 654 (662)
+++. .++|+|+.++++|.++|+++
T Consensus 345 ~~~~~~~~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 345 RAARNRAAERFDSERIVPQYEALYRRL 371 (371)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 8773 67999999999999999864
No 19
>PLN00142 sucrose synthase
Probab=100.00 E-value=5.4e-37 Score=349.42 Aligned_cols=434 Identities=16% Similarity=0.152 Sum_probs=271.9
Q ss_pred ceeEEEEeeccc--C-----ccccCcHHHHHhhHH--------HHHHhCCCcEE----EEeecCCCCCCcccchhhhccc
Q 006091 151 SYNIVFVTAEAA--P-----YSKTGGLGDVCGSLP--------VALAARGHRVM----VVSPRYFNGTAADENFTLAKDL 211 (662)
Q Consensus 151 ~MkIl~vs~~~~--P-----~~~~GG~~~~~~~La--------~~L~~~GheV~----Vit~~~~~~~~~~~~~~~~~~~ 211 (662)
-|||++|+.+.+ | ...+||..+|+.++| ++|+++||+|+ |+|-..+.... ..|...
T Consensus 279 ~~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~~~l~~~G~~v~~~v~i~TR~i~~~~~--~~~~~~--- 353 (815)
T PLN00142 279 VFNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKQQGLDIKPQILIVTRLIPDAKG--TTCNQR--- 353 (815)
T ss_pred hHhhheecccccccccccCCCCCCCCceehHHHHHHHHHHHHHHHHHhcCCCccceeEEEEeccCCccC--CcccCc---
Confidence 379999999854 1 134899999997655 67888999885 88876543221 111100
Q ss_pred CceeEEeecCCceEEEEEEEeeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhH---HHHHHHHHHhhhccccCCCCCCC
Q 006091 212 GCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQF---RYTLLCYAACEAPLVLPLGGFTY 288 (662)
Q Consensus 212 ~~~~~v~~~~~~~~~~~~~~~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~---~~~~~~~a~~~~~~~~~~~~f~~ 288 (662)
... ....+++.+++++...- + -|-.. |+.+.. ....|...+....... . .
T Consensus 354 --------------~e~-v~~~~~~~I~rvP~g~~--~--~~l~~---~i~ke~l~p~L~~f~~~~~~~~~~~-~----~ 406 (815)
T PLN00142 354 --------------LEK-VSGTEHSHILRVPFRTE--K--GILRK---WISRFDVWPYLETFAEDAASEILAE-L----Q 406 (815)
T ss_pred --------------cee-ccCCCceEEEecCCCCC--c--ccccc---ccCHHHHHHHHHHHHHHHHHHHHHh-c----C
Confidence 000 11123666777664320 0 01111 111111 1122333333322111 0 1
Q ss_pred CCccEEEeCCCCcchHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccC
Q 006091 289 GEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALD 368 (662)
Q Consensus 289 ~~pDVVh~h~~~~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 368 (662)
++||+||+|.|.+++++..++.+. |+|.|.|.|.+...... ..+.. | ......| .
T Consensus 407 ~~PDlIHaHYwdsg~vA~~La~~l-------gVP~v~T~HsL~k~K~~------~~~~~--~-~~~e~~y---------~ 461 (815)
T PLN00142 407 GKPDLIIGNYSDGNLVASLLAHKL-------GVTQCTIAHALEKTKYP------DSDIY--W-KKFDDKY---------H 461 (815)
T ss_pred CCCCEEEECCccHHHHHHHHHHHh-------CCCEEEEcccchhhhcc------ccCCc--c-cccchhh---------h
Confidence 269999999999999999999874 89999999987422110 01110 0 0000000 0
Q ss_pred cchhhhHHHHHHHhcCEEEecCcchhhhhhcc---------cCCcchhhhh---ccCCCceeEecCCCCCCCCCCCCchh
Q 006091 369 TGEAVNVLKGAIVTADRLLTVSKGYSWEITTV---------EGGYGLHEIL---SSRKSVLNGITNGIDITEWNPSSDEH 436 (662)
Q Consensus 369 ~~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~---------~~~~~l~~~~---~~~~~ki~vIpnGvd~~~~~~~~~~~ 436 (662)
+......+..++..||.||+.|......+... +.-.+|.+.+ .....++.+||+|+|...|.|.....
T Consensus 462 ~~~r~~aE~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~ 541 (815)
T PLN00142 462 FSCQFTADLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQ 541 (815)
T ss_pred hhhchHHHHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHH
Confidence 11123346678889999999886544322100 0001122211 12255899999999999887644221
Q ss_pred hcccCcccccchhHHhHHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCC-Ch----h
Q 006091 437 IASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSG-DP----Q 509 (662)
Q Consensus 437 i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g-~~----~ 509 (662)
.......+......-+....++.+|+..++++++|+++||+++.||++.|++|++.+.+ ++++|+|+|++ ++ .
T Consensus 542 ~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d 621 (815)
T PLN00142 542 KRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKD 621 (815)
T ss_pred hhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCcccccccc
Confidence 00000000011111122334567776444678899999999999999999999998753 47999999987 21 1
Q ss_pred hH-----HHHHHHHhhcC-CcEEEEcCC-----ChHHHHHHHH-hcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCccc
Q 006091 510 FE-----SWMRDTEATYK-DKYRGWVGF-----NVPISHRITA-GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGL 577 (662)
Q Consensus 510 ~~-----~~~~~l~~~~~-~~~~~~~~~-----~~~~~~~ll~-~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~ 577 (662)
.+ ..+..+..... ...+.|++. ..+.+..+++ .+|+||+||.+|+||++++||||||+|||+|+.||+
T Consensus 622 ~ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~ 701 (815)
T PLN00142 622 REEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGP 701 (815)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCH
Confidence 11 11222322222 122335443 1133445555 579999999999999999999999999999999999
Q ss_pred ccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH---HhcCCHHHHHHHHHHHH
Q 006091 578 RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM---EKDYTWENAAIQYEQVF 651 (662)
Q Consensus 578 ~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~~---~~~fs~e~~a~~~~~iy 651 (662)
+|+|.+ +.+|+++++.|+++++++|.++++.+..|++.|.+|++++. .++|||+.++++++++.
T Consensus 702 ~EIV~d----------G~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 702 AEIIVD----------GVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHhcC----------CCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999 89999999999999999999988766679999999999883 47899999999999865
No 20
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=1.6e-35 Score=320.75 Aligned_cols=363 Identities=18% Similarity=0.146 Sum_probs=247.5
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEE
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 231 (662)
-||++|.... ..||+++++.+|+++|.+.||++.|++..... .+... .
T Consensus 2 ~~il~ii~~~----~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~~------~~~~~----------------------~ 49 (374)
T TIGR03088 2 PLIVHVVYRF----DVGGLENGLVNLINHLPADRYRHAVVALTEVS------AFRKR----------------------I 49 (374)
T ss_pred ceEEEEeCCC----CCCcHHHHHHHHHhhccccccceEEEEcCCCC------hhHHH----------------------H
Confidence 5899998764 35999999999999999999999999743211 11110 0
Q ss_pred eeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHhh
Q 006091 232 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 311 (662)
Q Consensus 232 ~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~ 311 (662)
...++.++.+..... ..+..+..+.+.+ .. .+|||||+|+..+. .+.++...
T Consensus 50 ~~~~i~~~~~~~~~~---------------~~~~~~~~l~~~l----~~--------~~~Divh~~~~~~~-~~~~~~~~ 101 (374)
T TIGR03088 50 QRPDVAFYALHKQPG---------------KDVAVYPQLYRLL----RQ--------LRPDIVHTRNLAAL-EAQLPAAL 101 (374)
T ss_pred HhcCceEEEeCCCCC---------------CChHHHHHHHHHH----HH--------hCCCEEEEcchhHH-HHHHHHHh
Confidence 123666665542210 0111111122222 11 17999999975432 22333322
Q ss_pred cCCCCCCCCCcE-EEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecC
Q 006091 312 YRPHGVYKDARS-ILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 390 (662)
Q Consensus 312 ~~~~~~~~gip~-v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS 390 (662)
.++|. +.+.|.... .... + ..+ ....+.+.....+|.++++|
T Consensus 102 -------~~~~~~i~~~h~~~~---~~~~-----~--~~~--------------------~~~~~~~~~~~~~~~~i~vs 144 (374)
T TIGR03088 102 -------AGVPARIHGEHGRDV---FDLD-----G--SNW--------------------KYRWLRRLYRPLIHHYVAVS 144 (374)
T ss_pred -------cCCCeEEEeecCccc---ccch-----h--hHH--------------------HHHHHHHHHHhcCCeEEEeC
Confidence 34554 344443210 0000 0 000 00112233345689999999
Q ss_pred cchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCE
Q 006091 391 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 470 (662)
Q Consensus 391 ~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~ 470 (662)
+...+.+.. .++.+..++.+|+||+|.+.|.+.... +...+++...+ .+.++
T Consensus 145 ~~~~~~~~~---------~~~~~~~~~~vi~ngvd~~~~~~~~~~-----------------~~~~~~~~~~~--~~~~~ 196 (374)
T TIGR03088 145 RDLEDWLRG---------PVKVPPAKIHQIYNGVDTERFHPSRGD-----------------RSPILPPDFFA--DESVV 196 (374)
T ss_pred HHHHHHHHH---------hcCCChhhEEEeccCccccccCCCccc-----------------hhhhhHhhcCC--CCCeE
Confidence 988876642 234456789999999999887654321 11222233333 46789
Q ss_pred EEEEecCCCccCHHHHHHHHHhccC------CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcC
Q 006091 471 IGFIGRLDYQKGIDLIRLAAPEILA------DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 544 (662)
Q Consensus 471 Il~vGrl~~~Kg~d~Ll~A~~~l~~------~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aD 544 (662)
|+++||+.+.||++.+++|+.++.+ ++++|+++|+|+ ..+.+.+.+........+.+.|.. +++..+|+.||
T Consensus 197 i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~-~~~~~~~~~~~~~~~~~v~~~g~~-~~~~~~~~~ad 274 (374)
T TIGR03088 197 VGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGP-ARGACEQMVRAAGLAHLVWLPGER-DDVPALMQALD 274 (374)
T ss_pred EEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCCc-hHHHHHHHHHHcCCcceEEEcCCc-CCHHHHHHhcC
Confidence 9999999999999999999998854 268999999985 233333333333223344455543 34668999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHH
Q 006091 545 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKS 624 (662)
Q Consensus 545 i~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~ 624 (662)
++++||.+|+||++++|||+||+|||+|+.||.+|++.+ +.+|++++++|+++++++|..+++ +++
T Consensus 275 i~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~----------~~~g~~~~~~d~~~la~~i~~l~~----~~~ 340 (374)
T TIGR03088 275 LFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQH----------GVTGALVPPGDAVALARALQPYVS----DPA 340 (374)
T ss_pred EEEeccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcC----------CCceEEeCCCCHHHHHHHHHHHHh----CHH
Confidence 999999999999999999999999999999999999998 889999999999999999999886 788
Q ss_pred HHHHHHHHH---HHhcCCHHHHHHHHHHHHHHhh
Q 006091 625 SWEGLMRRG---MEKDYTWENAAIQYEQVFEWAS 655 (662)
Q Consensus 625 ~~~~l~~~~---~~~~fs~e~~a~~~~~iy~~~~ 655 (662)
.+.++++++ +.++|+|+.++++|+++|++++
T Consensus 341 ~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~ 374 (374)
T TIGR03088 341 ARRAHGAAGRARAEQQFSINAMVAAYAGLYDQLL 374 (374)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhC
Confidence 888887776 4579999999999999999863
No 21
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=1.1e-35 Score=324.96 Aligned_cols=378 Identities=18% Similarity=0.171 Sum_probs=248.1
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEe
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 232 (662)
|||||...|++. ...||++|+++||+|+|+|.......+
T Consensus 1 ~il~~~~~~p~~---------~~~la~~L~~~G~~v~~~~~~~~~~~~-------------------------------- 39 (396)
T cd03818 1 RILFVHQNFPGQ---------FRHLAPALAAQGHEVVFLTEPNAAPPP-------------------------------- 39 (396)
T ss_pred CEEEECCCCchh---------HHHHHHHHHHCCCEEEEEecCCCCCCC--------------------------------
Confidence 699998876442 467999999999999999977422110
Q ss_pred eCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHhhc
Q 006091 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 312 (662)
Q Consensus 233 ~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~~ 312 (662)
.|++++++.......+ ..+ .|............++...+..+...+| +|||||+|...+. +.+++...
T Consensus 40 -~~v~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~pdvi~~h~~~~~--~~~l~~~~ 107 (396)
T cd03818 40 -GGVRVVRYRPPRGPTS-GTH-----PYLREFEEAVLRGQAVARALLALRAKGF---RPDVIVAHPGWGE--TLFLKDVW 107 (396)
T ss_pred -CCeeEEEecCCCCCCC-CCC-----ccchhHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEECCccch--hhhHHHhC
Confidence 1577777764432211 111 1222232222222333333332222344 7999999964432 23344433
Q ss_pred CCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCcc
Q 006091 313 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 392 (662)
Q Consensus 313 ~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~~ 392 (662)
+++|+|.++|-+.... ....++......... ...+ ......+....+..+|.++++|+.
T Consensus 108 ------~~~~~v~~~~~~~~~~------~~~~~~~~~~~~~~~----~~~~-----~~~~~~~~~~~~~~ad~vi~~s~~ 166 (396)
T cd03818 108 ------PDAPLIGYFEFYYRAE------GADVGFDPEFPPSLD----DALR-----LRNRNALILLALAQADAGVSPTRW 166 (396)
T ss_pred ------CCCCEEEEEeeeecCC------CCCCCCCCCCCCchh----HHHH-----HHHhhhHhHHHHHhCCEEECCCHH
Confidence 5789998876321000 000011100000000 0000 011111245678899999999998
Q ss_pred hhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEEE
Q 006091 393 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 472 (662)
Q Consensus 393 ~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il 472 (662)
.++.+.. .+ ..++.+||||+|++.|.+.... ....+....+. ++.++|+
T Consensus 167 ~~~~~~~---------~~---~~ki~vI~ngvd~~~f~~~~~~-----------------~~~~~~~~~~~--~~~~~i~ 215 (396)
T cd03818 167 QRSTFPA---------EL---RSRISVIHDGIDTDRLRPDPQA-----------------RLRLPNGRVLT--PGDEVIT 215 (396)
T ss_pred HHhhCcH---------hh---ccceEEeCCCccccccCCCchh-----------------hhcccccccCC--CCCeEEE
Confidence 8876631 11 3689999999999988765421 11112222233 5678999
Q ss_pred EEec-CCCccCHHHHHHHHHhccC--CCeEEEEEeCCCh-----------hhHHHHHHHHhhcCCcEEEEcCC-ChHHHH
Q 006091 473 FIGR-LDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDP-----------QFESWMRDTEATYKDKYRGWVGF-NVPISH 537 (662)
Q Consensus 473 ~vGr-l~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~-----------~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~ 537 (662)
|+|| +.+.||++.+++|++.+.+ ++++|+|+|++.+ ..+..++.+........+.++|+ +.+++.
T Consensus 216 ~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~v~~~~~~ 295 (396)
T cd03818 216 FVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVPYDQYL 295 (396)
T ss_pred EECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEeCCCCHHHHH
Confidence 9998 9999999999999998865 5899999997421 11223333332111122334443 456677
Q ss_pred HHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 538 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 538 ~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
.+|+.||++++||..|++|++++||||||+|||+|+.||+.|++.+ +.+|+++++.|+++++++|.++++
T Consensus 296 ~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~----------~~~G~lv~~~d~~~la~~i~~ll~ 365 (396)
T cd03818 296 ALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVITD----------GENGLLVDFFDPDALAAAVIELLD 365 (396)
T ss_pred HHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchhhccc----------CCceEEcCCCCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999998 889999999999999999999987
Q ss_pred HhhhCHHHHHHHHHHH---HHhcCCHHHHHHHHHH
Q 006091 618 TYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQ 649 (662)
Q Consensus 618 ~~~~~~~~~~~l~~~~---~~~~fs~e~~a~~~~~ 649 (662)
+++.+.+|++++ +.++|+|+.++++|++
T Consensus 366 ----~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 366 ----DPARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred ----CHHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 888888888887 3567999999999863
No 22
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=1.6e-35 Score=324.29 Aligned_cols=276 Identities=16% Similarity=0.197 Sum_probs=209.5
Q ss_pred CccEEEeCCCCcchHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCc
Q 006091 290 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT 369 (662)
Q Consensus 290 ~pDVVh~h~~~~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 369 (662)
+||+||+|.+..+.....++.... .+.|+++|+|+..... . ...
T Consensus 118 ~~diihaH~~~~~~~~~~~~~~~~-----~~~~~~~t~Hg~d~~~---~----------~~~------------------ 161 (406)
T PRK15427 118 VADVFIAHFGPAGVTAAKLRELGV-----LRGKIATIFHGIDISS---R----------EVL------------------ 161 (406)
T ss_pred CCCEEEEcCChHHHHHHHHHHhCC-----CCCCeEEEEccccccc---c----------hhh------------------
Confidence 689999999877766666654211 2456788999752100 0 000
Q ss_pred chhhhHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchh
Q 006091 370 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGK 449 (662)
Q Consensus 370 ~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~ 449 (662)
......++..++.+|.++++|+..++.+.. ++.+.+++.+||||+|.+.|.+....
T Consensus 162 ~~~~~~~~~~~~~ad~vv~~S~~~~~~l~~----------~g~~~~ki~vi~nGvd~~~f~~~~~~-------------- 217 (406)
T PRK15427 162 NHYTPEYQQLFRRGDLMLPISDLWAGRLQK----------MGCPPEKIAVSRMGVDMTRFSPRPVK-------------- 217 (406)
T ss_pred hhhhHHHHHHHHhCCEEEECCHHHHHHHHH----------cCCCHHHEEEcCCCCCHHHcCCCccc--------------
Confidence 001123456678999999999988877642 23456789999999999887653211
Q ss_pred HHhHHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEE
Q 006091 450 VQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRG 527 (662)
Q Consensus 450 ~~~k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~ 527 (662)
.+ .+...|+++||+.+.||++.+++|++.+.+ ++++|+|+|+|+ ..+++.+.+........+.
T Consensus 218 ------------~~--~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~-~~~~l~~~~~~~~l~~~V~ 282 (406)
T PRK15427 218 ------------AP--ATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGP-WERRLRTLIEQYQLEDVVE 282 (406)
T ss_pred ------------cC--CCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECch-hHHHHHHHHHHcCCCCeEE
Confidence 01 245679999999999999999999999975 489999999995 3333333333322222333
Q ss_pred EcCC-ChHHHHHHHHhcCEEEEcCCC------CCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEE
Q 006091 528 WVGF-NVPISHRITAGCDILLMPSRF------EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSF 600 (662)
Q Consensus 528 ~~~~-~~~~~~~ll~~aDi~v~PS~~------E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~ 600 (662)
+.|+ +.+++.++|+.||++++||.. |++|++++|||+||+|||+|+.||++|++.+ +.+|+++
T Consensus 283 ~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~----------~~~G~lv 352 (406)
T PRK15427 283 MPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEA----------DKSGWLV 352 (406)
T ss_pred EeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcC----------CCceEEe
Confidence 4444 456677999999999999974 9999999999999999999999999999998 8999999
Q ss_pred CCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHH
Q 006091 601 LPLSEESMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEW 653 (662)
Q Consensus 601 ~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~---~~~~fs~e~~a~~~~~iy~~ 653 (662)
+++|+++++++|.++++ .|++++.+|++++ +.++|+|+.+++++.++|++
T Consensus 353 ~~~d~~~la~ai~~l~~---~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 353 PENDAQALAQRLAAFSQ---LDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred CCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 99999999999998875 2788888888887 46899999999999999976
No 23
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=3e-35 Score=319.73 Aligned_cols=359 Identities=13% Similarity=0.203 Sum_probs=252.5
Q ss_pred eeEEEEeecccCc--cccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEE
Q 006091 152 YNIVFVTAEAAPY--SKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 229 (662)
Q Consensus 152 MkIl~vs~~~~P~--~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 229 (662)
-||+|++..-.|. ...||+++++.++++.|+ ++|+|+|...+...+ .
T Consensus 3 ~~~~~~~~~~~~~p~~~~g~ve~~~~~~~~~l~---~~~~~~~~~~~~~~~----------------------------~ 51 (380)
T PRK15484 3 DKIIFTVTPIFSIPPRGAAAVETWIYQVAKRTS---IPNRIACIKNPGYPE----------------------------Y 51 (380)
T ss_pred ceEEEEeccCCCCCCccccHHHHHHHHhhhhcc---CCeeEEEecCCCCCc----------------------------h
Confidence 3788888875443 468999999999999995 399999987553111 0
Q ss_pred EEeeCCceEEEEeCCCCCCC-CCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHH
Q 006091 230 HEYREGVDWVFVDHPSYHRP-GNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 308 (662)
Q Consensus 230 ~~~~~gv~v~~i~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll 308 (662)
....+|+.++.++.+....+ ...|... ....+...+...+... +..++||||+|+... +. ..+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~-----~~~~~~vi~v~~~~~-~~-~~~ 115 (380)
T PRK15484 52 TKVNDNCDIHYIGFSRIYKRLFQKWTRL---------DPLPYSQRILNIAHKF-----TITKDSVIVIHNSMK-LY-RQI 115 (380)
T ss_pred hhccCCCceEEEEeccccchhhhhhhcc---------CchhHHHHHHHHHHhc-----CCCCCcEEEEeCcHH-hH-HHH
Confidence 12335777777754332111 0001000 0011122222221111 112589999998442 22 222
Q ss_pred HhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEe
Q 006091 309 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 388 (662)
Q Consensus 309 ~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~ 388 (662)
+.+. +++|+|+++|+.. . ...+..++.+++
T Consensus 116 ~~~~------~~~~~v~~~h~~~-----~---------------------------------------~~~~~~~~~ii~ 145 (380)
T PRK15484 116 RERA------PQAKLVMHMHNAF-----E---------------------------------------PELLDKNAKIIV 145 (380)
T ss_pred HhhC------CCCCEEEEEeccc-----C---------------------------------------hhHhccCCEEEE
Confidence 3322 6789999999631 0 011245799999
Q ss_pred cCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCC
Q 006091 389 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 468 (662)
Q Consensus 389 vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~ 468 (662)
+|+..++.+.. . .+..++.+||||+|...|.+.. +..++++++++ ++.
T Consensus 146 ~S~~~~~~~~~---------~--~~~~~i~vIpngvd~~~~~~~~-------------------~~~~~~~~~~~--~~~ 193 (380)
T PRK15484 146 PSQFLKKFYEE---------R--LPNADISIVPNGFCLETYQSNP-------------------QPNLRQQLNIS--PDE 193 (380)
T ss_pred cCHHHHHHHHh---------h--CCCCCEEEecCCCCHHHcCCcc-------------------hHHHHHHhCCC--CCC
Confidence 99998877642 1 2356799999999988776543 23567778876 567
Q ss_pred CEEEEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCCh-------hhHHHHHHHHhhcCCcEEEEcCC-ChHHHHH
Q 006091 469 PLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDP-------QFESWMRDTEATYKDKYRGWVGF-NVPISHR 538 (662)
Q Consensus 469 ~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~-------~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~ 538 (662)
++|+|+||+.+.||++.|++|++.+.+ ++++|+|+|+|+. .+.+.++.+......++. ++|+ +.+++..
T Consensus 194 ~~il~~Grl~~~Kg~~~Li~A~~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v~-~~G~~~~~~l~~ 272 (380)
T PRK15484 194 TVLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCI-MLGGQPPEKMHN 272 (380)
T ss_pred eEEEEeccCccccCHHHHHHHHHHHHHhCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCcEE-EeCCCCHHHHHH
Confidence 899999999999999999999999864 5899999998742 122333334333333333 4444 4567789
Q ss_pred HHHhcCEEEEcCCC-CCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceE-EECCCCHHHHHHHHHHHH
Q 006091 539 ITAGCDILLMPSRF-EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGW-SFLPLSEESMLTALRFAI 616 (662)
Q Consensus 539 ll~~aDi~v~PS~~-E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~-l~~~~d~~~la~aI~~~l 616 (662)
+|+.||++++||.+ |+||++++||||||+|||+++.||++|++.+ +.+|+ ++++.|+++++++|..++
T Consensus 273 ~~~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~----------~~~G~~l~~~~d~~~la~~I~~ll 342 (380)
T PRK15484 273 YYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLE----------GITGYHLAEPMTSDSIISDINRTL 342 (380)
T ss_pred HHHhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhccc----------CCceEEEeCCCCHHHHHHHHHHHH
Confidence 99999999999986 9999999999999999999999999999998 88999 568899999999999998
Q ss_pred HHhhhCHHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHhh
Q 006091 617 RTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEWAS 655 (662)
Q Consensus 617 ~~~~~~~~~~~~l~~~~---~~~~fs~e~~a~~~~~iy~~~~ 655 (662)
+ |++. .++++++ +.++|+|+.++++|+++|+..+
T Consensus 343 ~----d~~~-~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~~ 379 (380)
T PRK15484 343 A----DPEL-TQIAEQAKDFVFSKYSWEGVTQRFEEQIHNWF 379 (380)
T ss_pred c----CHHH-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 7 6664 5677776 4689999999999999998754
No 24
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=2.3e-34 Score=312.80 Aligned_cols=381 Identities=24% Similarity=0.303 Sum_probs=258.7
Q ss_pred eEEEEeecccCc-----cccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEE
Q 006091 153 NIVFVTAEAAPY-----SKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIA 227 (662)
Q Consensus 153 kIl~vs~~~~P~-----~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 227 (662)
||+++.....|. ...||+++++.+|+++|+++||+|+|++...+.....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~-------------------------- 54 (398)
T cd03800 1 RIALISLHGSPLAQPGGADTGGQNVYVLELARALARLGHEVDIFTRRIDDALPP-------------------------- 54 (398)
T ss_pred CeEEEeccccccccCCCCCCCceeehHHHHHHHHhccCceEEEEEecCCcccCC--------------------------
Confidence 455555543332 2368999999999999999999999998764321100
Q ss_pred EEEEeeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHH
Q 006091 228 FFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVL 307 (662)
Q Consensus 228 ~~~~~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~l 307 (662)
.....+++.+++++....... ... .+ ......+...+...+... ..+||+||+|.+..+..+..
T Consensus 55 -~~~~~~~~~~~~~~~~~~~~~---~~~---~~---~~~~~~~~~~~~~~~~~~------~~~~Div~~~~~~~~~~~~~ 118 (398)
T cd03800 55 -IVELAPGVRVVRVPAGPAEYL---PKE---EL---WPYLDEFADDLLRFLRRE------GGRPDLIHAHYWDSGLVALL 118 (398)
T ss_pred -ccccccceEEEecccccccCC---Chh---hc---chhHHHHHHHHHHHHHhc------CCCccEEEEecCccchHHHH
Confidence 011234666666653221100 000 00 001111222222222111 02699999999888777766
Q ss_pred HHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEE
Q 006091 308 LASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLL 387 (662)
Q Consensus 308 l~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii 387 (662)
++.. .++|+|++.|+........ .. ...+ +........++.+++.+|.++
T Consensus 119 ~~~~-------~~~~~i~~~h~~~~~~~~~------~~-~~~~----------------~~~~~~~~~~~~~~~~ad~ii 168 (398)
T cd03800 119 LARR-------LGIPLVHTFHSLGAVKRRH------LG-AADT----------------YEPARRIEAEERLLRAADRVI 168 (398)
T ss_pred HHhh-------cCCceEEEeecccccCCcc------cc-cccc----------------cchhhhhhHHHHHHhhCCEEE
Confidence 6654 4799999999753211000 00 0000 000122345677889999999
Q ss_pred ecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCC
Q 006091 388 TVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPD 467 (662)
Q Consensus 388 ~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~ 467 (662)
++|+...+.+.. .+.....++.+||||+|...|.+.... ...+++++.+ ++
T Consensus 169 ~~s~~~~~~~~~---------~~~~~~~~~~vi~ng~~~~~~~~~~~~------------------~~~~~~~~~~--~~ 219 (398)
T cd03800 169 ASTPQEAEELYS---------LYGAYPRRIRVVPPGVDLERFTPYGRA------------------EARRARLLRD--PD 219 (398)
T ss_pred EcCHHHHHHHHH---------HccccccccEEECCCCCccceecccch------------------hhHHHhhccC--CC
Confidence 999988776642 233445569999999998877654321 1114445544 56
Q ss_pred CCEEEEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhh----HHHHHHHHhhcC-CcEEEEcCC-ChHHHHHH
Q 006091 468 CPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQF----ESWMRDTEATYK-DKYRGWVGF-NVPISHRI 539 (662)
Q Consensus 468 ~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~----~~~~~~l~~~~~-~~~~~~~~~-~~~~~~~l 539 (662)
+++|+|+||+.+.||++.+++|+..+.+ ++++|+++|++.... ...++.+..... ...+.+.++ +.+++..+
T Consensus 220 ~~~i~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 299 (398)
T cd03800 220 KPRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPAL 299 (398)
T ss_pred CcEEEEEcccccccCHHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHH
Confidence 7899999999999999999999999875 489999999985321 112222332221 122224443 45667789
Q ss_pred HHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHh
Q 006091 540 TAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTY 619 (662)
Q Consensus 540 l~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~ 619 (662)
|+.||++++||..|++|++++|||++|+|||+++.+|..|++.+ +++|+++++.|+++++++|.++++
T Consensus 300 ~~~adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~----------~~~g~~~~~~~~~~l~~~i~~l~~-- 367 (398)
T cd03800 300 YRAADVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVD----------GVTGLLVDPRDPEALAAALRRLLT-- 367 (398)
T ss_pred HHhCCEEEecccccccCcHHHHHHhcCCCEEECCCCCHHHHccC----------CCCeEEeCCCCHHHHHHHHHHHHh--
Confidence 99999999999999999999999999999999999999999998 789999999999999999999887
Q ss_pred hhCHHHHHHHHHHHH---HhcCCHHHHHHHHH
Q 006091 620 REHKSSWEGLMRRGM---EKDYTWENAAIQYE 648 (662)
Q Consensus 620 ~~~~~~~~~l~~~~~---~~~fs~e~~a~~~~ 648 (662)
+++.+.+++.++. .++|||+.++++|+
T Consensus 368 --~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 368 --DPALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred --CHHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 7888888888773 48999999999986
No 25
>PRK10125 putative glycosyl transferase; Provisional
Probab=100.00 E-value=1.4e-34 Score=316.08 Aligned_cols=378 Identities=12% Similarity=0.064 Sum_probs=229.2
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEE
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 231 (662)
|||++|+.. ...||+++.+.+|++.|.++||+|.++..+...... + .
T Consensus 1 mkil~i~~~----l~~GGaeri~~~L~~~l~~~G~~~~i~~~~~~~~~~--~---------------------------~ 47 (405)
T PRK10125 1 MNILQFNVR----LAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKE--S---------------------------V 47 (405)
T ss_pred CeEEEEEee----ecCCchhHHHHHHHHHHHhcCCeEEEEEecCCCccc--c---------------------------c
Confidence 899999974 346999999999999999999999999876332110 0 0
Q ss_pred eeCCce-EEEEeCCCCCCCCCCCCCCCCCCCchhHH------HHHHH-HHHhhhccccCCCCCCCCCccEEEeCCCCcch
Q 006091 232 YREGVD-WVFVDHPSYHRPGNPYGDINGAFGDNQFR------YTLLC-YAACEAPLVLPLGGFTYGEKCIFLVNDWHAGL 303 (662)
Q Consensus 232 ~~~gv~-v~~i~~~~~~~~~~~y~~~~~~~~~~~~~------~~~~~-~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l 303 (662)
..+.++ .+.+. +.+.. + -+... ....+ ....+.+.. .+ +|||||+|..++.+
T Consensus 48 ~~~~~~~~~~~~-~~~~~----~--------~~~~~~~~~~~~~~~~~~~~~~~i~~----~~---~pDviHlH~~~~~~ 107 (405)
T PRK10125 48 SHQNYPQVIKHT-PRMTA----M--------ANIALFRLFNRDLFGNFNELYRTITR----TP---GPVVLHFHVLHSYW 107 (405)
T ss_pred ccCCcceEEEec-ccHHH----H--------HHHHHHHhcchhhcchHHHHHHHHhh----cc---CCCEEEEecccCce
Confidence 001111 11111 00000 0 00000 00000 111111110 12 79999999988753
Q ss_pred HHH--HHH------hhcCCCCCCCCCcEEEEecCCC-CCCCCChhhhhhcCCChhhhcccc---c--ccccccc-ccccC
Q 006091 304 VPV--LLA------SKYRPHGVYKDARSILVIHNLS-HQGVEPAATYKNLGLPSEWYGALE---W--VFPTWAR-THALD 368 (662)
Q Consensus 304 ~~~--ll~------~~~~~~~~~~gip~v~tiH~~~-~~~~~~~~~~~~~~l~~~~~~~~~---~--~~~~~~~-~~~~~ 368 (662)
+.. ++. .+. .++|+|+|+|+.. +.|.|.... .+ ..|..... . .||.+.. .....
T Consensus 108 ~~~~~l~~~~~~~~~~~------~~~piV~TlHd~~~~tg~c~~~~--~C---~~~~~~c~~Cp~l~~~~~~~~d~~~~~ 176 (405)
T PRK10125 108 LNLKSVVRFCEKVKNHK------PDVTLVWTLHDHWSVTGRCAFTD--GC---EGWKTGCQKCPTLNNYPPVKVDRAHQL 176 (405)
T ss_pred ecHHHHHHHHhhhhccc------CCCCEEEecccccccCCCcCCCc--cc---ccccccCCCCCCccCCCCCccchHHHH
Confidence 322 111 121 5799999999974 223332200 00 01110000 0 0111000 00000
Q ss_pred cchhhhHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccch
Q 006091 369 TGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSG 448 (662)
Q Consensus 369 ~~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~ 448 (662)
|..+....+.....++.++++|+++++.+.. .++ ..++.+||||||+..+.+....
T Consensus 177 ~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~---------~~~--~~~i~vI~NGid~~~~~~~~~~------------- 232 (405)
T PRK10125 177 VAGKRQLFREMLALGCQFISPSQHVADAFNS---------LYG--PGRCRIINNGIDMATEAILAEL------------- 232 (405)
T ss_pred HHHHHHHHHHHhhcCcEEEEcCHHHHHHHHH---------HcC--CCCEEEeCCCcCcccccccccc-------------
Confidence 1222233344444578999999999887642 222 4689999999997533221110
Q ss_pred hHHhHHHHHHHhCCCCCCCCCEEEEEec-C-CCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEE
Q 006091 449 KVQCKIALQKELGLPIRPDCPLIGFIGR-L-DYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYR 526 (662)
Q Consensus 449 ~~~~k~~~r~~lgl~~~~~~~~Il~vGr-l-~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~ 526 (662)
...+ .+ +++++|+++|+ + .+.||++.+++|+..+. ++++|+++|+|++.. ...+.+.
T Consensus 233 -----~~~~----~~--~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~-~~~~L~ivG~g~~~~---------~~~v~~~ 291 (405)
T PRK10125 233 -----PPVR----ET--QGKPKIAVVAHDLRYDGKTDQQLVREMMALG-DKIELHTFGKFSPFT---------AGNVVNH 291 (405)
T ss_pred -----cccc----cC--CCCCEEEEEEeccccCCccHHHHHHHHHhCC-CCeEEEEEcCCCccc---------ccceEEe
Confidence 0000 01 46688999999 4 46899999999999874 479999999985321 1123334
Q ss_pred EEcCCChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHH
Q 006091 527 GWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEE 606 (662)
Q Consensus 527 ~~~~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~ 606 (662)
++.+ +...+..+|+.||++|+||.+|+||++++||||||+|||+|++||++|++.+ .+|++++++|++
T Consensus 292 g~~~-~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~-----------~~G~lv~~~d~~ 359 (405)
T PRK10125 292 GFET-DKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQK-----------SGGKTVSEEEVL 359 (405)
T ss_pred cCcC-CHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeC-----------CcEEEECCCCHH
Confidence 4432 4455678999999999999999999999999999999999999999999976 499999999999
Q ss_pred HHHHHHHHHHHHhhhCHHHH--HHHHHHHHHhcCCHHHHHHHHHHHHHHh
Q 006091 607 SMLTALRFAIRTYREHKSSW--EGLMRRGMEKDYTWENAAIQYEQVFEWA 654 (662)
Q Consensus 607 ~la~aI~~~l~~~~~~~~~~--~~l~~~~~~~~fs~e~~a~~~~~iy~~~ 654 (662)
+|++++...+. +.... ...++..+.++|+|+.++++|+++|+++
T Consensus 360 ~La~~~~~~~~----~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 360 QLAQLSKPEIA----QAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred HHHhccCHHHH----HHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 99986532221 11000 0112222467899999999999999863
No 26
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=1e-34 Score=315.94 Aligned_cols=373 Identities=17% Similarity=0.177 Sum_probs=240.8
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEE
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 231 (662)
||||++++.+ ..||.++++.+||++|+++||+|+|+|+..+... .+ .+
T Consensus 1 mkIl~~~~~~----~~gG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~----~~------------------------~~ 48 (392)
T cd03805 1 LRVAFIHPDL----GIGGAERLVVDAALALQSRGHEVTIYTSHHDPSH----CF------------------------EE 48 (392)
T ss_pred CeEEEECCCC----CCchHHHHHHHHHHHHHhCCCeEEEEcCCCCchh----cc------------------------hh
Confidence 8999998653 3599999999999999999999999997532110 00 11
Q ss_pred eeCC-ceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHh
Q 006091 232 YREG-VDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 310 (662)
Q Consensus 232 ~~~g-v~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~ 310 (662)
..++ +.++.+... .. + ..++. ...+..+..+....... ... ...++||||+|.+..+. + ++..
T Consensus 49 ~~~~~~~i~~~~~~-~~-~-~~~~~-----~~~~~~~~~~~~~~~~~-~~~-----~~~~~Dvi~~~~~~~~~-~-~~~~ 112 (392)
T cd03805 49 TKDGTLPVRVRGDW-LP-R-SIFGR-----FHILCAYLRMLYLALYL-LLL-----PDEKYDVFIVDQVSACV-P-LLKL 112 (392)
T ss_pred ccCCeeEEEEEeEE-Ec-c-hhhHh-----HHHHHHHHHHHHHHHHH-Hhc-----ccCCCCEEEEcCcchHH-H-HHHH
Confidence 1122 333333211 00 0 00000 00011111111111100 001 12368999999765432 2 2222
Q ss_pred hcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecC
Q 006091 311 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 390 (662)
Q Consensus 311 ~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS 390 (662)
. .+.|+++++|... ..... ...+... .+ ......+++.+++.+|.|+++|
T Consensus 113 ~-------~~~~~i~~~h~~~-------~~~~~---~~~~~~~---~~----------~~~~~~~e~~~~~~ad~ii~~s 162 (392)
T cd03805 113 F-------SPSKILFYCHFPD-------QLLAQ---RGSLLKR---LY----------RKPFDWLEEFTTGMADKIVVNS 162 (392)
T ss_pred h-------cCCcEEEEEecCh-------HHhcC---CCcHHHH---HH----------HHHHHHHHHHHhhCceEEEEcC
Confidence 1 2389999999431 11100 0001000 00 0112345677788999999999
Q ss_pred cchhhhhhcccCCcchhhhhcc-CCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCC
Q 006091 391 KGYSWEITTVEGGYGLHEILSS-RKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP 469 (662)
Q Consensus 391 ~~~~~~i~~~~~~~~l~~~~~~-~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~ 469 (662)
+..++.+.. .++. ...++.+|+||+|.+.+.+.... ..+.....+ ++.+
T Consensus 163 ~~~~~~~~~---------~~~~~~~~~~~vi~n~vd~~~~~~~~~~-------------------~~~~~~~~~--~~~~ 212 (392)
T cd03805 163 NFTASVFKK---------TFPSLAKNPREVVYPCVDTDSFESTSED-------------------PDPGLLIPK--SGKK 212 (392)
T ss_pred hhHHHHHHH---------HhcccccCCcceeCCCcCHHHcCccccc-------------------ccccccccC--CCce
Confidence 998876642 2222 22334699999998877654321 011222223 5678
Q ss_pred EEEEEecCCCccCHHHHHHHHHhccC-----CCeEEEEEeCCChh------hHHHHHHHHhh-c-CCcEEEEcCC-ChHH
Q 006091 470 LIGFIGRLDYQKGIDLIRLAAPEILA-----DDIQFVMLGSGDPQ------FESWMRDTEAT-Y-KDKYRGWVGF-NVPI 535 (662)
Q Consensus 470 ~Il~vGrl~~~Kg~d~Ll~A~~~l~~-----~d~~lvivG~g~~~------~~~~~~~l~~~-~-~~~~~~~~~~-~~~~ 535 (662)
+|+++||+.+.||++.+++|++++.+ ++++|+++|+|++. +...++.+... . ....+.+.|+ +.++
T Consensus 213 ~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~~ 292 (392)
T cd03805 213 TFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSISDSQ 292 (392)
T ss_pred EEEEEeeecccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCCChHH
Confidence 99999999999999999999999864 48999999998532 22333333332 1 1122233333 4566
Q ss_pred HHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHH
Q 006091 536 SHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFA 615 (662)
Q Consensus 536 ~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~ 615 (662)
+..+|+.||++++||..|+||++++|||+||+|||+++.||..|++.+ +.+|+++++ |+++++++|..+
T Consensus 293 ~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~----------~~~g~~~~~-~~~~~a~~i~~l 361 (392)
T cd03805 293 KELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVD----------GETGFLCEP-TPEEFAEAMLKL 361 (392)
T ss_pred HHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhcc----------CCceEEeCC-CHHHHHHHHHHH
Confidence 678999999999999999999999999999999999999999999998 789999975 899999999998
Q ss_pred HHHhhhCHHHHHHHHHHH---HHhcCCHHHHHHHH
Q 006091 616 IRTYREHKSSWEGLMRRG---MEKDYTWENAAIQY 647 (662)
Q Consensus 616 l~~~~~~~~~~~~l~~~~---~~~~fs~e~~a~~~ 647 (662)
++ +++.+.++++++ +.++|+|+.+++++
T Consensus 362 ~~----~~~~~~~~~~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 362 AN----DPDLADRMGAAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred Hh----ChHHHHHHHHHHHHHHHHhcCHHHHhhhC
Confidence 87 778888888877 46899999998864
No 27
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=100.00 E-value=5.1e-34 Score=309.12 Aligned_cols=358 Identities=16% Similarity=0.111 Sum_probs=238.5
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEe
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 232 (662)
||++++..+ + .||+++++.++++.|.+.||+|+++++.... ..+....+. ...
T Consensus 1 ki~~~~~~~-~---~GGv~~~~~~l~~~l~~~g~~v~~~~~~~~~-----~~~~~~~~~------------------~~~ 53 (372)
T cd03792 1 KVLHVNSTP-Y---GGGVAEILHSLVPLMRDLGVDTRWEVIKGDP-----EFFNVTKKF------------------HNA 53 (372)
T ss_pred CeEEEeCCC-C---CCcHHHHHHHHHHHHHHcCCCceEEecCCCh-----hHHHHHHHh------------------hHh
Confidence 699999763 2 6999999999999999999999999875211 011100000 000
Q ss_pred eCCceEEEEeCCCCCCCCCCCCCCCCCCCch-hHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHhh
Q 006091 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDN-QFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 311 (662)
Q Consensus 233 ~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~ 311 (662)
..|.++ + .... ...+..+....... . ....+|||||+|++....++.. .+
T Consensus 54 ~~g~~~--------------~------~~~~~~~~~~~~~~~~~~~--~-----~~~~~~Dvv~~h~~~~~~~~~~--~~ 104 (372)
T cd03792 54 LQGADI--------------E------LSEEEKEIYLEWNEENAER--P-----LLDLDADVVVIHDPQPLALPLF--KK 104 (372)
T ss_pred hcCCCC--------------C------CCHHHHHHHHHHHHHHhcc--c-----cccCCCCEEEECCCCchhHHHh--hh
Confidence 001111 0 0011 11111111111110 0 1133799999998774332222 11
Q ss_pred cCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCc
Q 006091 312 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 391 (662)
Q Consensus 312 ~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~ 391 (662)
. .++|+|++.|+..... .. ....+++..+..+|.++++|.
T Consensus 105 ~------~~~~~i~~~H~~~~~~-------------~~---------------------~~~~~~~~~~~~~d~~i~~~~ 144 (372)
T cd03792 105 K------RGRPWIWRCHIDLSSP-------------NR---------------------RVWDFLQPYIEDYDAAVFHLP 144 (372)
T ss_pred c------CCCeEEEEeeeecCCC-------------cH---------------------HHHHHHHHHHHhCCEEeecHH
Confidence 1 3799999999642100 00 011234556778999998884
Q ss_pred chhhhhhcccCCcchhhhhccCCCceeEecCCCCCCC-CCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCE
Q 006091 392 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITE-WNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 470 (662)
Q Consensus 392 ~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~-~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~ 470 (662)
.+... .....++ +||||||... +..... ...+..++++++++ ++.++
T Consensus 145 ~~~~~--------------~~~~~~~-vipngvd~~~~~~~~~~---------------~~~~~~~~~~~~~~--~~~~~ 192 (372)
T cd03792 145 EYVPP--------------QVPPRKV-IIPPSIDPLSGKNRELS---------------PADIEYILEKYGID--PERPY 192 (372)
T ss_pred HhcCC--------------CCCCceE-EeCCCCCCCccccCCCC---------------HHHHHHHHHHhCCC--CCCcE
Confidence 33211 1123445 9999999643 111110 01144677888887 67899
Q ss_pred EEEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCCh---hhHHHHHHHHh--hcC--CcEEEEcCCChHHHHHHHH
Q 006091 471 IGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDP---QFESWMRDTEA--TYK--DKYRGWVGFNVPISHRITA 541 (662)
Q Consensus 471 Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~---~~~~~~~~l~~--~~~--~~~~~~~~~~~~~~~~ll~ 541 (662)
|+++||+.+.||++.+++|++.+.+ ++++|+++|+|+. ......+.+.. ... +.+.+....+.+++..+|+
T Consensus 193 i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 272 (372)
T cd03792 193 ITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQR 272 (372)
T ss_pred EEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHH
Confidence 9999999999999999999998865 4899999999853 22333333332 122 2333333225567778999
Q ss_pred hcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhh
Q 006091 542 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYRE 621 (662)
Q Consensus 542 ~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~ 621 (662)
.||++++||.+|+||++++||||||+|||+++.+|+.+++.+ +.+|++++ +.++++.+|..++.
T Consensus 273 ~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~----------~~~g~~~~--~~~~~a~~i~~ll~---- 336 (372)
T cd03792 273 ASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIED----------GETGFLVD--TVEEAAVRILYLLR---- 336 (372)
T ss_pred hCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhccc----------CCceEEeC--CcHHHHHHHHHHHc----
Confidence 999999999999999999999999999999999999999988 88999987 46778888888876
Q ss_pred CHHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHh
Q 006091 622 HKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEWA 654 (662)
Q Consensus 622 ~~~~~~~l~~~~---~~~~fs~e~~a~~~~~iy~~~ 654 (662)
+++++++|++++ +.++|+|+.++++|+++|+.+
T Consensus 337 ~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~ 372 (372)
T cd03792 337 DPELRRKMGANAREHVRENFLITRHLKDYLYLISKL 372 (372)
T ss_pred CHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHhC
Confidence 788888998887 357999999999999999863
No 28
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=100.00 E-value=1.9e-33 Score=298.30 Aligned_cols=328 Identities=21% Similarity=0.237 Sum_probs=226.2
Q ss_pred eeEEEEeecccC--ccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEE
Q 006091 152 YNIVFVTAEAAP--YSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 229 (662)
Q Consensus 152 MkIl~vs~~~~P--~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 229 (662)
|||++|++.+.| ....||.++++.+|+++|.++||+|.|+++..+....
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~----------------------------- 51 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAA----------------------------- 51 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCccc-----------------------------
Confidence 899999998754 2358999999999999999999999999976422100
Q ss_pred EEeeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHH
Q 006091 230 HEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 309 (662)
Q Consensus 230 ~~~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~ 309 (662)
............. .. ............+.+.+.. .+|||||+|.+...+. +.
T Consensus 52 -------~~~~~~~~~~~~~--~~--------~~~~~~~~~~~~~~~~~~~--------~~~Divh~~~~~~~~~---~~ 103 (335)
T cd03802 52 -------PLVPVVPEPLRLD--AP--------GRDRAEAEALALAERALAA--------GDFDIVHNHSLHLPLP---FA 103 (335)
T ss_pred -------ceeeccCCCcccc--cc--------hhhHhhHHHHHHHHHHHhc--------CCCCEEEecCcccchh---hh
Confidence 0000000000000 00 0001111111222222221 2699999998877654 22
Q ss_pred hhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEec
Q 006091 310 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 389 (662)
Q Consensus 310 ~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~v 389 (662)
+. .++|+|+++|+....... .........+.++++
T Consensus 104 -~~------~~~~~v~~~h~~~~~~~~--------------------------------------~~~~~~~~~~~~~~~ 138 (335)
T cd03802 104 -RP------LPVPVVTTLHGPPDPELL--------------------------------------KLYYAARPDVPFVSI 138 (335)
T ss_pred -cc------cCCCEEEEecCCCCcccc--------------------------------------hHHHhhCcCCeEEEe
Confidence 22 579999999975311000 012234567889999
Q ss_pred CcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCC
Q 006091 390 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP 469 (662)
Q Consensus 390 S~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~ 469 (662)
|+...+.... ..++.+||||+|...|.+.. ..+.
T Consensus 139 s~~~~~~~~~--------------~~~~~vi~ngvd~~~~~~~~--------------------------------~~~~ 172 (335)
T cd03802 139 SDAQRRPWPP--------------LPWVATVHNGIDLDDYPFRG--------------------------------PKGD 172 (335)
T ss_pred cHHHHhhccc--------------ccccEEecCCcChhhCCCCC--------------------------------CCCC
Confidence 9887765431 16799999999988876522 3457
Q ss_pred EEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhh----cCCcEEEEcCCChHHHHHHHHhcCE
Q 006091 470 LIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEAT----YKDKYRGWVGFNVPISHRITAGCDI 545 (662)
Q Consensus 470 ~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~ll~~aDi 545 (662)
.|+|+||+.+.||++.++++++.. +++|+++|+|+.. .......... ..+.+.|++ +.+++..+|+.+|+
T Consensus 173 ~i~~~Gr~~~~Kg~~~li~~~~~~---~~~l~i~G~~~~~-~~~~~~~~~~~~~~~~v~~~G~~--~~~~~~~~~~~~d~ 246 (335)
T cd03802 173 YLLFLGRISPEKGPHLAIRAARRA---GIPLKLAGPVSDP-DYFYREIAPELLDGPDIEYLGEV--GGAEKAELLGNARA 246 (335)
T ss_pred EEEEEEeeccccCHHHHHHHHHhc---CCeEEEEeCCCCH-HHHHHHHHHhcccCCcEEEeCCC--CHHHHHHHHHhCcE
Confidence 899999999999999999998764 7999999999521 2222222222 223333333 45556789999999
Q ss_pred EEEcCCC-CCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHH
Q 006091 546 LLMPSRF-EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKS 624 (662)
Q Consensus 546 ~v~PS~~-E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~ 624 (662)
+++||.+ |+||++++||||||+|||+++.||.+|++.+ +.+|+++++ +++++++|..+.+ ...
T Consensus 247 ~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~----------~~~g~l~~~--~~~l~~~l~~l~~----~~~ 310 (335)
T cd03802 247 LLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVED----------GVTGFLVDS--VEELAAAVARADR----LDR 310 (335)
T ss_pred EEeCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeC----------CCcEEEeCC--HHHHHHHHHHHhc----cHH
Confidence 9999985 9999999999999999999999999999998 789999986 9999999988754 221
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 006091 625 SWEGLMRRGMEKDYTWENAAIQYEQVFE 652 (662)
Q Consensus 625 ~~~~l~~~~~~~~fs~e~~a~~~~~iy~ 652 (662)
+.+++.+.++|+|+.++++|+++|+
T Consensus 311 ---~~~~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 311 ---AACRRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred ---HHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 2233335689999999999999985
No 29
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=4.5e-33 Score=298.49 Aligned_cols=355 Identities=19% Similarity=0.197 Sum_probs=237.6
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEe
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 232 (662)
||++|+..++|. ..||+++++.+++++|.++||+|.|++........ ...
T Consensus 1 ~i~~i~~~~~~~-~~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~~~~-----------------------------~~~ 50 (363)
T cd04955 1 KIAIIGTRGIPA-KYGGFETFVEELAPRLVARGHEVTVYCRSPYPKQK-----------------------------ETE 50 (363)
T ss_pred CeEEEecCcCCc-ccCcHHHHHHHHHHHHHhcCCCEEEEEccCCCCCc-----------------------------ccc
Confidence 799998876663 48999999999999999999999999976321110 112
Q ss_pred eCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHhhc
Q 006091 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 312 (662)
Q Consensus 233 ~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~~ 312 (662)
.+|++++.++.+... ... .....+..+..... .++|++|+|.......+.....+.
T Consensus 51 ~~~i~~~~~~~~~~~----~~~-------~~~~~~~~~~~~~~-------------~~~~~~~i~~~~~~~~~~~~~~~~ 106 (363)
T cd04955 51 YNGVRLIHIPAPEIG----GLG-------TIIYDILAILHALF-------------VKRDIDHVHALGPAIAPFLPLLRL 106 (363)
T ss_pred cCCceEEEcCCCCcc----chh-------hhHHHHHHHHHHHh-------------ccCCeEEEEecCccHHHHHHHHHh
Confidence 357777776543210 000 00111111111111 024444444433322222222222
Q ss_pred CCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCcc
Q 006091 313 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 392 (662)
Q Consensus 313 ~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~~ 392 (662)
.++|+++++|+..+... . ... + . ......+++.+++.+|.++++|+.
T Consensus 107 ------~~~~~v~~~h~~~~~~~----~---~~~---~-----------~------~~~~~~~~~~~~~~ad~ii~~s~~ 153 (363)
T cd04955 107 ------KGKKVVVNMDGLEWKRA----K---WGR---P-----------A------KRYLKFGEKLAVKFADRLIADSPG 153 (363)
T ss_pred ------cCCCEEEEccCcceeec----c---ccc---c-----------h------hHHHHHHHHHHHhhccEEEeCCHH
Confidence 47999999997532110 0 000 0 0 011123456677899999999999
Q ss_pred hhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEEE
Q 006091 393 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 472 (662)
Q Consensus 393 ~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il 472 (662)
.++.+.. .++. .+ .+||||+|...+.+. ...+++++++ +...++
T Consensus 154 ~~~~~~~---------~~~~--~~-~~i~ngv~~~~~~~~---------------------~~~~~~~~~~---~~~~i~ 197 (363)
T cd04955 154 IKEYLKE---------KYGR--DS-TYIPYGADHVVSSEE---------------------DEILKKYGLE---PGRYYL 197 (363)
T ss_pred HHHHHHH---------hcCC--CC-eeeCCCcChhhcchh---------------------hhhHHhcCCC---CCcEEE
Confidence 8887742 2222 22 899999998765431 1234455544 345688
Q ss_pred EEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHH----hhcCCcEEEEcCCChHHHHHHHHhcCEEEE
Q 006091 473 FIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTE----ATYKDKYRGWVGFNVPISHRITAGCDILLM 548 (662)
Q Consensus 473 ~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~ 548 (662)
++||+.+.||++.+++|++++.. +++|+++|+|+. .....+.+. ....+.+.|++ ..++...+|..||++++
T Consensus 198 ~~G~~~~~Kg~~~li~a~~~l~~-~~~l~ivG~~~~-~~~~~~~~~~~~~~~~~V~~~g~~--~~~~~~~~~~~ad~~v~ 273 (363)
T cd04955 198 LVGRIVPENNIDDLIEAFSKSNS-GKKLVIVGNADH-NTPYGKLLKEKAAADPRIIFVGPI--YDQELLELLRYAALFYL 273 (363)
T ss_pred EEecccccCCHHHHHHHHHhhcc-CceEEEEcCCCC-cchHHHHHHHHhCCCCcEEEcccc--ChHHHHHHHHhCCEEEe
Confidence 99999999999999999999865 899999999842 122222222 11223344443 45556689999999999
Q ss_pred cCCC-CCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHH
Q 006091 549 PSRF-EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWE 627 (662)
Q Consensus 549 PS~~-E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~ 627 (662)
||.. |+||++++|||+||+|||+|+.|+..|++.+ +|+++++.|. ++++|..+++ +++.+.
T Consensus 274 ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~------------~g~~~~~~~~--l~~~i~~l~~----~~~~~~ 335 (363)
T cd04955 274 HGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD------------KAIYFKVGDD--LASLLEELEA----DPEEVS 335 (363)
T ss_pred CCccCCCCChHHHHHHHcCCCEEEecCCccceeecC------------CeeEecCchH--HHHHHHHHHh----CHHHHH
Confidence 9998 9999999999999999999999999999865 7899987765 8999988887 778888
Q ss_pred HHHHHH---HHhcCCHHHHHHHHHHHHH
Q 006091 628 GLMRRG---MEKDYTWENAAIQYEQVFE 652 (662)
Q Consensus 628 ~l~~~~---~~~~fs~e~~a~~~~~iy~ 652 (662)
++++++ +.++|||+.++++|+++|+
T Consensus 336 ~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 336 AMAKAARERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 888776 3567999999999999984
No 30
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=2.1e-33 Score=300.45 Aligned_cols=339 Identities=20% Similarity=0.219 Sum_probs=240.2
Q ss_pred ccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEeeCCceEEEEeCCC
Q 006091 166 KTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPS 245 (662)
Q Consensus 166 ~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~gv~v~~i~~~~ 245 (662)
..||+++++.+|+++|+++||+|.|+++..+.. .. ....+++++.+....
T Consensus 8 ~~gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~~--------~~----------------------~~~~~~~~~~~~~~~ 57 (355)
T cd03819 8 ESGGVERGTLELARALVERGHRSLVASAGGRLV--------AE----------------------LEAEGSRHIKLPFIS 57 (355)
T ss_pred ccCcHHHHHHHHHHHHHHcCCEEEEEcCCCchH--------HH----------------------HHhcCCeEEEccccc
Confidence 359999999999999999999999998652110 00 011245544443211
Q ss_pred CCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHhhcCCCCCCCCCcEEE
Q 006091 246 YHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSIL 325 (662)
Q Consensus 246 ~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~~~~~~~~~gip~v~ 325 (662)
. ..+ .....+ ..+.+.+. ..+||+||+|.....+...++... .++|+++
T Consensus 58 ---~-~~~--------~~~~~~----~~l~~~~~--------~~~~dii~~~~~~~~~~~~~~~~~-------~~~~~i~ 106 (355)
T cd03819 58 ---K-NPL--------RILLNV----ARLRRLIR--------EEKVDIVHARSRAPAWSAYLAARR-------TRPPFVT 106 (355)
T ss_pred ---c-chh--------hhHHHH----HHHHHHHH--------HcCCCEEEECCCchhHHHHHHHHh-------cCCCEEE
Confidence 0 011 011111 11222221 127999999987766655554433 4799999
Q ss_pred EecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCcchhhhhhcccCCcc
Q 006091 326 VIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYG 405 (662)
Q Consensus 326 tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~ 405 (662)
++|+... .. .+.+..+..+|.++++|+...+.+.
T Consensus 107 ~~h~~~~-----~~----------------------------------~~~~~~~~~~~~vi~~s~~~~~~~~------- 140 (355)
T cd03819 107 TVHGFYS-----VN----------------------------------FRYNAIMARGDRVIAVSNFIADHIR------- 140 (355)
T ss_pred EeCCchh-----hH----------------------------------HHHHHHHHhcCEEEEeCHHHHHHHH-------
Confidence 9997521 00 0123446789999999999888774
Q ss_pred hhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEEEEEecCCCccCHHH
Q 006091 406 LHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDL 485 (662)
Q Consensus 406 l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~ 485 (662)
..++.+..++.+||||+|...+.+.... ......++++++++ ++.++|+++||+.+.||++.
T Consensus 141 --~~~~~~~~k~~~i~ngi~~~~~~~~~~~--------------~~~~~~~~~~~~~~--~~~~~i~~~Gr~~~~Kg~~~ 202 (355)
T cd03819 141 --ENYGVDPDRIRVIPRGVDLDRFDPGAVP--------------PERILALAREWPLP--KGKPVILLPGRLTRWKGQEV 202 (355)
T ss_pred --HhcCCChhhEEEecCCccccccCccccc--------------hHHHHHHHHHcCCC--CCceEEEEeeccccccCHHH
Confidence 2345566789999999998877653321 00122367777766 67789999999999999999
Q ss_pred HHHHHHhccC--CCeEEEEEeCCChh--hHHHH-HHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEEEcC-CCCCCcHHH
Q 006091 486 IRLAAPEILA--DDIQFVMLGSGDPQ--FESWM-RDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPS-RFEPCGLNQ 559 (662)
Q Consensus 486 Ll~A~~~l~~--~d~~lvivG~g~~~--~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~PS-~~E~fgl~~ 559 (662)
+++++..+.+ ++++|+++|.++.. +...+ +.+........+.+.|+ .+++..+|+.||++++|| .+|++|+++
T Consensus 203 li~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~-~~~~~~~l~~ad~~i~ps~~~e~~~~~l 281 (355)
T cd03819 203 FIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGH-CSDMPAAYALADIVVSASTEPEAFGRTA 281 (355)
T ss_pred HHHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCC-cccHHHHHHhCCEEEecCCCCCCCchHH
Confidence 9999999977 58999999998632 22222 22222222233446666 344668999999999999 789999999
Q ss_pred HHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH---HHh
Q 006091 560 LYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG---MEK 636 (662)
Q Consensus 560 lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~---~~~ 636 (662)
+|||+||+|||+++.||..|++.+ +.+|+++++.|+++++++|..++. .+++.+.++++++ +.+
T Consensus 282 ~EA~a~G~PvI~~~~~~~~e~i~~----------~~~g~~~~~~~~~~l~~~i~~~~~---~~~~~~~~~~~~a~~~~~~ 348 (355)
T cd03819 282 VEAQAMGRPVIASDHGGARETVRP----------GETGLLVPPGDAEALAQALDQILS---LLPEGRAKMFAKARMCVET 348 (355)
T ss_pred HHHHhcCCCEEEcCCCCcHHHHhC----------CCceEEeCCCCHHHHHHHHHHHHh---hCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998 779999999999999999986665 3788888888877 578
Q ss_pred cCCHHHH
Q 006091 637 DYTWENA 643 (662)
Q Consensus 637 ~fs~e~~ 643 (662)
+|+|++|
T Consensus 349 ~f~~~~~ 355 (355)
T cd03819 349 LFSYDRM 355 (355)
T ss_pred hhhhccC
Confidence 9999864
No 31
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=100.00 E-value=1.4e-32 Score=294.17 Aligned_cols=355 Identities=17% Similarity=0.174 Sum_probs=245.1
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEe
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 232 (662)
||++++..+ ..||.++++.+|+++|.++||+|+|++........ ...
T Consensus 1 ~il~~~~~~----~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~---~~~-------------------------- 47 (360)
T cd04951 1 KILYVITGL----GLGGAEKQVVDLADQFVAKGHQVAIISLTGESEVK---PPI-------------------------- 47 (360)
T ss_pred CeEEEecCC----CCCCHHHHHHHHHHhcccCCceEEEEEEeCCCCcc---chh--------------------------
Confidence 588887653 36999999999999999999999999865321100 000
Q ss_pred eCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHhhc
Q 006091 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 312 (662)
Q Consensus 233 ~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~~ 312 (662)
.......+... .. ...+......+.+.++. .+|||||+|.....++..++....
T Consensus 48 -~~~~~~~~~~~---~~--------------~~~~~~~~~~~~~~~~~--------~~pdiv~~~~~~~~~~~~l~~~~~ 101 (360)
T cd04951 48 -DATIILNLNMS---KN--------------PLSFLLALWKLRKILRQ--------FKPDVVHAHMFHANIFARLLRLFL 101 (360)
T ss_pred -hccceEEeccc---cc--------------chhhHHHHHHHHHHHHh--------cCCCEEEEcccchHHHHHHHHhhC
Confidence 00000111100 00 00000111112222221 279999999887776666655443
Q ss_pred CCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCcc
Q 006091 313 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 392 (662)
Q Consensus 313 ~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~~ 392 (662)
.++|++++.|+....+ .. ...+.+.....++.++++|+.
T Consensus 102 ------~~~~~v~~~h~~~~~~--------------~~---------------------~~~~~~~~~~~~~~~~~~s~~ 140 (360)
T cd04951 102 ------PSPPLICTAHSKNEGG--------------RL---------------------RMLAYRLTDFLSDLTTNVSKE 140 (360)
T ss_pred ------CCCcEEEEeeccCchh--------------HH---------------------HHHHHHHHhhccCceEEEcHH
Confidence 5789999999752110 00 011122333467888888888
Q ss_pred hhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEEE
Q 006091 393 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 472 (662)
Q Consensus 393 ~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il 472 (662)
..+.+.+ ....+..++.+||||+|...+.+.... +..++++++++ +++++++
T Consensus 141 ~~~~~~~---------~~~~~~~~~~~i~ng~~~~~~~~~~~~-----------------~~~~~~~~~~~--~~~~~~l 192 (360)
T cd04951 141 ALDYFIA---------SKAFNANKSFVVYNGIDTDRFRKDPAR-----------------RLKIRNALGVK--NDTFVIL 192 (360)
T ss_pred HHHHHHh---------ccCCCcccEEEEccccchhhcCcchHH-----------------HHHHHHHcCcC--CCCEEEE
Confidence 7776642 112356789999999998777654321 45677888876 6778999
Q ss_pred EEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEEEcC
Q 006091 473 FIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPS 550 (662)
Q Consensus 473 ~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~PS 550 (662)
++|++.+.||++.+++++..+.+ ++++|+|+|+|+ ..+...+.+........+.+.+... .+..+|+.||++++||
T Consensus 193 ~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~-~~~~~~~~~~~~~~~~~v~~~g~~~-~~~~~~~~ad~~v~~s 270 (360)
T cd04951 193 AVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGP-LRATLERLIKALGLSNRVKLLGLRD-DIAAYYNAADLFVLSS 270 (360)
T ss_pred EEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCC-cHHHHHHHHHhcCCCCcEEEecccc-cHHHHHHhhceEEecc
Confidence 99999999999999999999876 489999999986 2333333333322222233445433 4568999999999999
Q ss_pred CCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHH
Q 006091 551 RFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLM 630 (662)
Q Consensus 551 ~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~ 630 (662)
.+|++|++++|||++|+|||+++.|++.|++.+ +|++++++|+++++++|.++++. +++.+..+.
T Consensus 271 ~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~------------~g~~~~~~~~~~~~~~i~~ll~~---~~~~~~~~~ 335 (360)
T cd04951 271 AWEGFGLVVAEAMACELPVVATDAGGVREVVGD------------SGLIVPISDPEALANKIDEILKM---SGEERDIIG 335 (360)
T ss_pred cccCCChHHHHHHHcCCCEEEecCCChhhEecC------------CceEeCCCCHHHHHHHHHHHHhC---CHHHHHHHH
Confidence 999999999999999999999999999999975 88999999999999999999852 455555554
Q ss_pred HH--HHHhcCCHHHHHHHHHHHHH
Q 006091 631 RR--GMEKDYTWENAAIQYEQVFE 652 (662)
Q Consensus 631 ~~--~~~~~fs~e~~a~~~~~iy~ 652 (662)
.+ .+.++|+|+.++++|.++|+
T Consensus 336 ~~~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 336 ARRERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHhh
Confidence 43 25789999999999999996
No 32
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=2.8e-33 Score=305.49 Aligned_cols=381 Identities=13% Similarity=0.084 Sum_probs=232.6
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCC-CcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEE
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG-HRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAF 228 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~G-heV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 228 (662)
++|||++||..|.|+ .+|+.+.+..++..|+++| |+|+||+|.++.... ...|...... . ....++ .
T Consensus 3 ~~mrIaivTdt~lP~--vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~-~~~~~~~~~f----~---~~~~~e--~ 70 (462)
T PLN02846 3 KKQHIAIFTTASLPW--MTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQ-KLVYPNKITF----S---SPSEQE--A 70 (462)
T ss_pred CCCEEEEEEcCCCCC--CCCeeccHHHHHHHHHhcCCcEEEEEecCCccccc-cccccccccc----c---Cchhhh--h
Confidence 569999999999998 7999999999999999999 899999998764221 1112100000 0 000000 0
Q ss_pred EEEeeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCc-chH--H
Q 006091 229 FHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHA-GLV--P 305 (662)
Q Consensus 229 ~~~~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~-~l~--~ 305 (662)
+.....+-.+++++...+......|+.. .+.......+.+.+.. .+|||||+|+... +++ +
T Consensus 71 ~~~~~~~~~v~r~~s~~~p~yp~r~~~~--------~r~~~~~~~i~~~l~~--------~~pDVIHv~tP~~LG~~~~g 134 (462)
T PLN02846 71 YVRQWLEERISFLPKFSIKFYPGKFSTD--------KRSILPVGDISETIPD--------EEADIAVLEEPEHLTWYHHG 134 (462)
T ss_pred hhhhhccCeEEEecccccccCccccccc--------ccccCChHHHHHHHHh--------cCCCEEEEcCchhhhhHHHH
Confidence 0000112234444433321100011000 0000011122222221 2799999997433 443 2
Q ss_pred HHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCE
Q 006091 306 VLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADR 385 (662)
Q Consensus 306 ~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ 385 (662)
..++.+ . .++|.+.|+. +..+.+. ...+....+.. .....++++ .++|.
T Consensus 135 ~~~~~k-------~-~~vV~tyHT~-y~~Y~~~---~~~g~~~~~l~-----------------~~~~~~~~r--~~~d~ 183 (462)
T PLN02846 135 KRWKTK-------F-RLVIGIVHTN-YLEYVKR---EKNGRVKAFLL-----------------KYINSWVVD--IYCHK 183 (462)
T ss_pred HHHHhc-------C-CcEEEEECCC-hHHHHHH---hccchHHHHHH-----------------HHHHHHHHH--HhcCE
Confidence 232222 2 3488899973 1111100 00000001000 001112221 24899
Q ss_pred EEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCC
Q 006091 386 LLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIR 465 (662)
Q Consensus 386 ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~ 465 (662)
++++|....+ +. ..+.+..+|||...|.+.... .++... +
T Consensus 184 vi~pS~~~~~-l~----------------~~~i~~v~GVd~~~f~~~~~~--------------------~~~~~~-~-- 223 (462)
T PLN02846 184 VIRLSAATQD-YP----------------RSIICNVHGVNPKFLEIGKLK--------------------LEQQKN-G-- 223 (462)
T ss_pred EEccCHHHHH-Hh----------------hCEEecCceechhhcCCCccc--------------------HhhhcC-C--
Confidence 9999975543 31 124445689999888765421 122222 2
Q ss_pred CC--CCEEEEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH
Q 006091 466 PD--CPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA 541 (662)
Q Consensus 466 ~~--~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~ 541 (662)
.+ .+.++|+||+.++||++.|++|++.+.+ ++++|+|+|+|+ ..+++ +............+.|+... .++|+
T Consensus 224 ~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp-~~~~L-~~~a~~l~l~~~vf~G~~~~--~~~~~ 299 (462)
T PLN02846 224 EQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGE-DSDEV-KAAAEKLELDVRVYPGRDHA--DPLFH 299 (462)
T ss_pred CCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCc-cHHHH-HHHHHhcCCcEEEECCCCCH--HHHHH
Confidence 23 3468999999999999999999998865 589999999996 33333 33443333334346666443 26999
Q ss_pred hcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhh
Q 006091 542 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYRE 621 (662)
Q Consensus 542 ~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~ 621 (662)
.+|+||+||.+|+||++++||||||+|||+++.++ .+++.+ +.+|+++ .|.++++++|..++..
T Consensus 300 ~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~----------~~ng~~~--~~~~~~a~ai~~~l~~--- 363 (462)
T PLN02846 300 DYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQ----------FPNCRTY--DDGKGFVRATLKALAE--- 363 (462)
T ss_pred hCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeec----------CCceEec--CCHHHHHHHHHHHHcc---
Confidence 99999999999999999999999999999999997 599988 8899998 4799999999999873
Q ss_pred CHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 006091 622 HKSSWEGLMRRGMEKDYTWENAAIQYEQVFEW 653 (662)
Q Consensus 622 ~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy~~ 653 (662)
+++ ++..++ .+.|||+.++++++++|+-
T Consensus 364 ~~~---~~~~~a-~~~~SWe~~~~~l~~~~~~ 391 (462)
T PLN02846 364 EPA---PLTDAQ-RHELSWEAATERFLRVADL 391 (462)
T ss_pred Cch---hHHHHH-HHhCCHHHHHHHHHHHhcc
Confidence 332 222222 3589999999999999973
No 33
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=100.00 E-value=6.1e-33 Score=297.47 Aligned_cols=355 Identities=20% Similarity=0.209 Sum_probs=243.9
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEE
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 231 (662)
|||++++.. + ..||.++++..++++|.++||+|+|++....
T Consensus 1 MkIl~~~~~--~--~~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~----------------------------------- 41 (365)
T cd03825 1 MKVLHLNTS--D--ISGGAARAAYRLHRALQAAGVDSTMLVQEKK----------------------------------- 41 (365)
T ss_pred CeEEEEecC--C--CCCcHHHHHHHHHHHHHhcCCceeEEEeecc-----------------------------------
Confidence 899999864 3 2599999999999999999999999986521
Q ss_pred eeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHhh
Q 006091 232 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 311 (662)
Q Consensus 232 ~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~ 311 (662)
.+.+ .+ ...+|||||+|.+....+...+..+
T Consensus 42 -------------~~~~----------------------------~~--------~~~~~diih~~~~~~~~~~~~~~~~ 72 (365)
T cd03825 42 -------------ALIS----------------------------KI--------EIINADIVHLHWIHGGFLSIEDLSK 72 (365)
T ss_pred -------------hhhh----------------------------Ch--------hcccCCEEEEEccccCccCHHHHHH
Confidence 0000 00 0126899999986665544443333
Q ss_pred cCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhh-ccccccccccccccccCcchhhhHHHHHH-HhcCEEEec
Q 006091 312 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWY-GALEWVFPTWARTHALDTGEAVNVLKGAI-VTADRLLTV 389 (662)
Q Consensus 312 ~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~ad~ii~v 389 (662)
.. .++|+|+|+|+...... ..... .....+. ......+....+...+ ........+..+ ..++.++++
T Consensus 73 ~~-----~~~~~v~~~hd~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~ 142 (365)
T cd03825 73 LL-----DRKPVVWTLHDMWPFTG--GCHYP--GGCDRYKTECGNCPQLGSYPEKDL-SRWIWRRKRKAWADLNLTIVAP 142 (365)
T ss_pred HH-----cCCCEEEEcccCccccc--ccCCc--cccccccccCCCCCCCCCCCcccH-HHHHHHHHHHHhccCCcEEEeh
Confidence 21 37999999998632100 00000 0000000 0000000000000000 000111112222 457789999
Q ss_pred CcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCC
Q 006091 390 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP 469 (662)
Q Consensus 390 S~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~ 469 (662)
|+...+.+.. .+..+..++.++|||+|...+.+.. +...++.++++ ++.+
T Consensus 143 s~~~~~~~~~---------~~~~~~~~~~vi~ngi~~~~~~~~~-------------------~~~~~~~~~~~--~~~~ 192 (365)
T cd03825 143 SRWLADCARS---------SSLFKGIPIEVIPNGIDTTIFRPRD-------------------KREARKRLGLP--ADKK 192 (365)
T ss_pred hHHHHHHHHh---------ccccCCCceEEeCCCCcccccCCCc-------------------HHHHHHHhCCC--CCCe
Confidence 9887776642 2234567899999999998876543 34567777876 5667
Q ss_pred EEEEEecCCC--ccCHHHHHHHHHhccC---CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcC
Q 006091 470 LIGFIGRLDY--QKGIDLIRLAAPEILA---DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 544 (662)
Q Consensus 470 ~Il~vGrl~~--~Kg~d~Ll~A~~~l~~---~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aD 544 (662)
++++.|+... .||++.+++|++.+.+ ++++++++|+++..... .....+.+.+++. +++.+..+|+.||
T Consensus 193 ~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~~~~-----~~~~~v~~~g~~~-~~~~~~~~~~~ad 266 (365)
T cd03825 193 IILFGAVGGTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPP-----DLPFPVHYLGSLN-DDESLALIYSAAD 266 (365)
T ss_pred EEEEEecCCCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchhhhc-----cCCCceEecCCcC-CHHHHHHHHHhCC
Confidence 7777777765 8999999999999875 68999999998632211 1112233334432 2556778999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHH
Q 006091 545 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKS 624 (662)
Q Consensus 545 i~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~ 624 (662)
++++||..|+||++++|||+||+|||+++.||+.|++.+ +.+|+++++.|+++++++|.+++. +++
T Consensus 267 ~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~----------~~~g~~~~~~~~~~~~~~l~~l~~----~~~ 332 (365)
T cd03825 267 VFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDH----------GVTGYLAKPGDPEDLAEGIEWLLA----DPD 332 (365)
T ss_pred EEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeC----------CCceEEeCCCCHHHHHHHHHHHHh----CHH
Confidence 999999999999999999999999999999999999998 789999999999999999999987 787
Q ss_pred HHHHHHHHH---HHhcCCHHHHHHHHHHHHHHh
Q 006091 625 SWEGLMRRG---MEKDYTWENAAIQYEQVFEWA 654 (662)
Q Consensus 625 ~~~~l~~~~---~~~~fs~e~~a~~~~~iy~~~ 654 (662)
.+.++++++ ..++|+|+.++++|+++|+++
T Consensus 333 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 333 EREELGEAARELAENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 788888776 457899999999999999864
No 34
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=100.00 E-value=4.7e-32 Score=310.09 Aligned_cols=465 Identities=19% Similarity=0.253 Sum_probs=341.7
Q ss_pred eEEEEeecccCc----cccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcc---------------c--
Q 006091 153 NIVFVTAEAAPY----SKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKD---------------L-- 211 (662)
Q Consensus 153 kIl~vs~~~~P~----~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~---------------~-- 211 (662)
-|+++|.+|.-. ..+||+|+.+.+..++++..|..++.|+..|..+...+..-...++ .
T Consensus 87 ~~aYFs~E~gl~~~lpiYsGGLG~LAgd~lksasdLg~P~vgvGllY~~GyF~Q~i~~dG~Q~e~~~~~~~~~~p~~~~~ 166 (778)
T cd04299 87 VAAYFSMEFGLHESLPIYSGGLGILAGDHLKAASDLGLPLVGVGLLYRQGYFRQRLDADGWQQETYPVNDFEQLPLEPVR 166 (778)
T ss_pred eeEEeccccccCCCCCccCchHHHHHHHHHHHHHhCCCCEEEEEeCcCCCCeEEEECCCCceeecCCCcCCCCCceEEEe
Confidence 355888875322 3589999999999999999999999999988776654322111110 0
Q ss_pred -----CceeEEeecCCceEEEEEEEeeCCceEEEEeCCC-----CCCCC--CCCCCCCCCCCchhHH---HHHHHHHHhh
Q 006091 212 -----GCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPS-----YHRPG--NPYGDINGAFGDNQFR---YTLLCYAACE 276 (662)
Q Consensus 212 -----~~~~~v~~~~~~~~~~~~~~~~~gv~v~~i~~~~-----~~~~~--~~y~~~~~~~~~~~~~---~~~~~~a~~~ 276 (662)
...+.+.++|+.....+|.....++++++++.+. +.+.. .+|+. ++..| +..|+.+.++
T Consensus 167 ~~~G~~~~v~v~l~g~~v~~rvw~~~vg~v~lylLDtd~~~n~~~~R~iT~~LYg~------D~~~Rl~Qe~~Lg~agl~ 240 (778)
T cd04299 167 DADGEPVRVSVELPGRTVYARVWKAQVGRVPLYLLDTDIPENSPDDRGITDRLYGG------DQETRIQQEILLGIGGVR 240 (778)
T ss_pred cCCCCeEEEEEeeCCCceEEEEEEEEcCCCCEEEecCCccccchhhcccccCCCCC------cHHHHHHHHHHHHHHHHH
Confidence 1245577788888888999888899999999775 33332 35653 45555 5888898888
Q ss_pred hccccCCCCCCCCCccEEEeCCCCcchHHH-----HHHhh-cCCCC--CCCCCcEEEEecCCCCCC--CCChhhhhh---
Q 006091 277 APLVLPLGGFTYGEKCIFLVNDWHAGLVPV-----LLASK-YRPHG--VYKDARSILVIHNLSHQG--VEPAATYKN--- 343 (662)
Q Consensus 277 ~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~-----ll~~~-~~~~~--~~~gip~v~tiH~~~~~~--~~~~~~~~~--- 343 (662)
.++.+ ++ +|||||+|+||++++++ ++... ..... ......+|+|+|++.++| .|+...+..
T Consensus 241 ~Lr~l---g~---~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~ 314 (778)
T cd04299 241 ALRAL---GI---KPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFG 314 (778)
T ss_pred HHHHh---CC---CCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhh
Confidence 77654 33 69999999999999998 54321 10000 012478999999999999 888777743
Q ss_pred -----cCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCcchh---hhhhcccCCcchhhhhccCCC
Q 006091 344 -----LGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYS---WEITTVEGGYGLHEILSSRKS 415 (662)
Q Consensus 344 -----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~~~~---~~i~~~~~~~~l~~~~~~~~~ 415 (662)
++++.+.+..+...++. +....++|++.++..|+.+.+||+-+. +++... +...++....
T Consensus 315 ~~~~~lgl~~~~~~~lg~e~~~-------~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~-----~~~g~p~~~~ 382 (778)
T cd04299 315 PYARELGLSRDRFLALGRENPG-------DDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAG-----LWPGFPVEEV 382 (778)
T ss_pred HHHHHcCCCHHHHhhhcccccc-------CccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhh-----hhccCCcccC
Confidence 56665554443332210 012458999999999999999999873 333221 1112223356
Q ss_pred ceeEecCCCCCCCCC-CCCchhhcccCc-------------------ccc---cchhHHhHHHHHHHh------------
Q 006091 416 VLNGITNGIDITEWN-PSSDEHIASHYS-------------------IDD---LSGKVQCKIALQKEL------------ 460 (662)
Q Consensus 416 ki~vIpnGvd~~~~~-~~~~~~i~~~~~-------------------~~~---~~~~~~~k~~~r~~l------------ 460 (662)
++..|.|||+...|. |..+..+ ..+. .++ ...|..+|..+.+..
T Consensus 383 ~i~~ITNGVh~~~W~~P~~~~l~-~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g 461 (778)
T cd04299 383 PIGHVTNGVHVPTWVAPEMRELY-DRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRG 461 (778)
T ss_pred ceeceeCCcchhhhcCHHHHHHH-HHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcC
Confidence 799999999999998 5444333 2221 122 246777787666553
Q ss_pred ---------CCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC------CCeEEEEEeCCChhhH------HHHHHHHh
Q 006091 461 ---------GLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA------DDIQFVMLGSGDPQFE------SWMRDTEA 519 (662)
Q Consensus 461 ---------gl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~------~d~~lvivG~g~~~~~------~~~~~l~~ 519 (662)
+.+.+++.++|+|+.|+..+||.+++++.+.++.+ .+++||+.|.+.|.++ +.+..++.
T Consensus 462 ~~~~~~~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~ 541 (778)
T cd04299 462 ASAEEIGEADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEPGKELIQEIVEFSR 541 (778)
T ss_pred CchhhhhhcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccchHHHHHHHHHHHHHh
Confidence 55566888999999999999999999999887733 4799999999975443 35555555
Q ss_pred --hcCCcEEEEcCCChHHHHHHHHhcCEEEEcCC--CCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCcc
Q 006091 520 --TYKDKYRGWVGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEG 595 (662)
Q Consensus 520 --~~~~~~~~~~~~~~~~~~~ll~~aDi~v~PS~--~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~ 595 (662)
....+++...+|+....+.++++||++++||+ +|+||++.|.||..|.+-+++--|...|.. + +.
T Consensus 542 ~p~~~~kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~----------g~ 610 (778)
T cd04299 542 RPEFRGRIVFLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-D----------GE 610 (778)
T ss_pred CcCCCCcEEEEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-C----------CC
Confidence 34568888999999999999999999999999 999999999999999999999999998887 4 78
Q ss_pred ceEEECC------------CCHHHHHHHHHHHHH-HhhhC-----HHHHHHHHHHHHHh---cCCHHHHHHHHHH-HHHH
Q 006091 596 TGWSFLP------------LSEESMLTALRFAIR-TYREH-----KSSWEGLMRRGMEK---DYTWENAAIQYEQ-VFEW 653 (662)
Q Consensus 596 ~G~l~~~------------~d~~~la~aI~~~l~-~~~~~-----~~~~~~l~~~~~~~---~fs~e~~a~~~~~-iy~~ 653 (662)
|||.+.+ .|.++|.+.|++.+. .+.++ |..|.+|+++++.. .|+|++|+++|.+ +|.-
T Consensus 611 nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y~p 690 (778)
T cd04299 611 NGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFYLP 690 (778)
T ss_pred CceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhHHH
Confidence 9999987 678889999976665 55443 78899999999876 9999999999976 5543
No 35
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=2.1e-32 Score=291.75 Aligned_cols=360 Identities=21% Similarity=0.211 Sum_probs=249.3
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEe
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 232 (662)
||++|+..+.|. .||.+.++..|+++|.++||+|.++++....... .+.
T Consensus 1 kIl~i~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~---~~~-------------------------- 49 (364)
T cd03814 1 RIAIVTDTFLPQ--VNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESE---GPA-------------------------- 49 (364)
T ss_pred CeEEEecccCcc--ccceehHHHHHHHHHHHCCCEEEEEeCCchhhcc---CCC--------------------------
Confidence 799999988885 5999999999999999999999999976422110 000
Q ss_pred eCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcc-hHHHHHHhh
Q 006091 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAG-LVPVLLASK 311 (662)
Q Consensus 233 ~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~-l~~~ll~~~ 311 (662)
..+.+..+..+.+.. +. + ....+..+...+ . ..+||+||+|..... .....+..
T Consensus 50 -~~~~~~~~~~~~~~~----~~-----~--~~~~~~~~~~~~----~--------~~~pdii~~~~~~~~~~~~~~~~~- 104 (364)
T cd03814 50 -RVVPVPSVPLPGYPE----IR-----L--ALPPRRRVRRLL----D--------AFAPDVVHIATPGPLGLAALRAAR- 104 (364)
T ss_pred -CceeecccccCcccc----eE-----e--cccchhhHHHHH----H--------hcCCCEEEEeccchhhHHHHHHHH-
Confidence 011111111110000 00 0 000001111111 1 127999999864432 22333332
Q ss_pred cCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCc
Q 006091 312 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 391 (662)
Q Consensus 312 ~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~ 391 (662)
. .++|+++++|+.. +........ .+.. .....+.+..+..+|.++++|+
T Consensus 105 ~------~~~~~i~~~~~~~-----~~~~~~~~~---~~~~-----------------~~~~~~~~~~~~~~d~i~~~s~ 153 (364)
T cd03814 105 R------LGIPVVTSYHTDF-----PEYLRYYGL---GPLS-----------------WLAWAYLRWFHNRADRVLVPSP 153 (364)
T ss_pred H------cCCCEEEEEecCh-----HHHhhhccc---chHh-----------------HhhHHHHHHHHHhCCEEEeCCH
Confidence 2 5899999999642 110000000 0000 0113456777889999999999
Q ss_pred chhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEE
Q 006091 392 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 471 (662)
Q Consensus 392 ~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~I 471 (662)
...+.+.. ....++.+++||+|...+.+.... ...+++++ + .+.++|
T Consensus 154 ~~~~~~~~------------~~~~~~~~~~~g~~~~~~~~~~~~------------------~~~~~~~~-~--~~~~~i 200 (364)
T cd03814 154 SLADELRA------------RGFRRVRLWPRGVDTELFHPRRRD------------------EALRARLG-P--PDRPVL 200 (364)
T ss_pred HHHHHHhc------------cCCCceeecCCCccccccCccccc------------------HHHHHHhC-C--CCCeEE
Confidence 88874431 224578999999998877654321 22344444 2 456899
Q ss_pred EEEecCCCccCHHHHHHHHHhccC-CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEEEcC
Q 006091 472 GFIGRLDYQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPS 550 (662)
Q Consensus 472 l~vGrl~~~Kg~d~Ll~A~~~l~~-~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~PS 550 (662)
+|+|++.+.||++.+++++..+.+ ++++|+++|.|+. .. ..+ ....++.+.+++ ..+++..+|+.||++++||
T Consensus 201 ~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~~-~~-~~~--~~~~~v~~~g~~--~~~~~~~~~~~~d~~l~~s 274 (364)
T cd03814 201 LYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGPA-RA-RLE--ARYPNVHFLGFL--DGEELAAAYASADVFVFPS 274 (364)
T ss_pred EEEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCch-HH-HHh--ccCCcEEEEecc--CHHHHHHHHHhCCEEEECc
Confidence 999999999999999999999976 4899999999852 22 222 222334555554 5566779999999999999
Q ss_pred CCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHH
Q 006091 551 RFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLM 630 (662)
Q Consensus 551 ~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~ 630 (662)
..|+||++++|||+||+|||+++.++..|++.+ +++|+++++.|.++++++|.+++. +++.+.+++
T Consensus 275 ~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~----------~~~g~~~~~~~~~~l~~~i~~l~~----~~~~~~~~~ 340 (364)
T cd03814 275 RTETFGLVVLEAMASGLPVVAPDAGGPADIVTD----------GENGLLVEPGDAEAFAAALAALLA----DPELRRRMA 340 (364)
T ss_pred ccccCCcHHHHHHHcCCCEEEcCCCCchhhhcC----------CcceEEcCCCCHHHHHHHHHHHHc----CHHHHHHHH
Confidence 999999999999999999999999999999998 789999999999999999999887 888889988
Q ss_pred HHHH--HhcCCHHHHHHHHHHHHH
Q 006091 631 RRGM--EKDYTWENAAIQYEQVFE 652 (662)
Q Consensus 631 ~~~~--~~~fs~e~~a~~~~~iy~ 652 (662)
+++. .++|+|++++++++++|+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~ 364 (364)
T cd03814 341 ARARAEAERRSWEAFLDNLLEAYR 364 (364)
T ss_pred HHHHHHHhhcCHHHHHHHHHHhhC
Confidence 8873 368999999999999884
No 36
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=3.6e-32 Score=310.57 Aligned_cols=286 Identities=14% Similarity=0.101 Sum_probs=196.7
Q ss_pred CccEEEeCCCCcchHHHHHHhhcCCCCCCCCCcEEE-EecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccC
Q 006091 290 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSIL-VIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALD 368 (662)
Q Consensus 290 ~pDVVh~h~~~~~l~~~ll~~~~~~~~~~~gip~v~-tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 368 (662)
+|||||+|...+.+++.+.... .++|+|+ +.|+.... .. ...+ .+
T Consensus 400 kpDIVH~h~~~a~~lg~lAa~~-------~gvPvIv~t~h~~~~~-~~----------~~~~----~~------------ 445 (694)
T PRK15179 400 VPSVVHIWQDGSIFACALAALL-------AGVPRIVLSVRTMPPV-DR----------PDRY----RV------------ 445 (694)
T ss_pred CCcEEEEeCCcHHHHHHHHHHH-------cCCCEEEEEeCCCccc-cc----------hhHH----HH------------
Confidence 6999999988877766666543 4688876 55653110 00 0000 00
Q ss_pred cchhhhHHHHHHHhcC--EEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCccccc
Q 006091 369 TGEAVNVLKGAIVTAD--RLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDL 446 (662)
Q Consensus 369 ~~~~~~~~k~~~~~ad--~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~ 446 (662)
. .......+..++ .+++.|+..++.+. +.++.+.+++.|||||||...|.+....
T Consensus 446 --~-~~~l~~~l~~~~~~i~Vs~S~~~~~~l~---------~~~g~~~~kI~VI~NGVd~~~f~~~~~~----------- 502 (694)
T PRK15179 446 --E-YDIIYSELLKMRGVALSSNSQFAAHRYA---------DWLGVDERRIPVVYNGLAPLKSVQDDAC----------- 502 (694)
T ss_pred --H-HHHHHHHHHhcCCeEEEeCcHHHHHHHH---------HHcCCChhHEEEECCCcCHHhcCCCchh-----------
Confidence 0 011111233344 45555555554443 2345667899999999998777543211
Q ss_pred chhHHhHHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhcCCc
Q 006091 447 SGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDK 524 (662)
Q Consensus 447 ~~~~~~k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~~~~ 524 (662)
+ ..+..+......+.++|+++||+.+.||++.+++|++.+.+ ++++|+|+|+|+ ..+.+.+.+.+....+
T Consensus 503 ------~-~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~-~~~~L~~l~~~lgL~~ 574 (694)
T PRK15179 503 ------T-AMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGP-LLESVREFAQRLGMGE 574 (694)
T ss_pred ------h-HHHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCc-chHHHHHHHHHcCCCC
Confidence 0 11111111111456799999999999999999999998864 589999999995 3333333333333334
Q ss_pred EEEEcCCChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCC
Q 006091 525 YRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLS 604 (662)
Q Consensus 525 ~~~~~~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d 604 (662)
.+.+.|+.++ +..+|+.||++|+||.+|+||++++|||+||+|||+|+.||++|+|.+ +.+|++++++|
T Consensus 575 ~V~flG~~~d-v~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~d----------g~~GlLv~~~d 643 (694)
T PRK15179 575 RILFTGLSRR-VGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQE----------GVTGLTLPADT 643 (694)
T ss_pred cEEEcCCcch-HHHHHHhcCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccC----------CCCEEEeCCCC
Confidence 4556776554 568999999999999999999999999999999999999999999998 89999999777
Q ss_pred H--HHHHHHHHHHHHHhhhCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 006091 605 E--ESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFE 652 (662)
Q Consensus 605 ~--~~la~aI~~~l~~~~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy~ 652 (662)
+ ++++++|.+++.....+++..+ .++..+.++|||+.++++|+++|+
T Consensus 644 ~~~~~La~aL~~ll~~l~~~~~l~~-~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 644 VTAPDVAEALARIHDMCAADPGIAR-KAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred CChHHHHHHHHHHHhChhccHHHHH-HHHHHHHHhCCHHHHHHHHHHHhC
Confidence 4 6899999988875544554433 222224679999999999999995
No 37
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=100.00 E-value=3.6e-32 Score=288.50 Aligned_cols=359 Identities=18% Similarity=0.131 Sum_probs=255.9
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEe
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 232 (662)
||++|+..+.+ ||.++++..|+++|.+.||+|.+++...... +... ..
T Consensus 1 ~i~~i~~~~~~----gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~~------~~~~----------------------~~ 48 (365)
T cd03807 1 KVLHVITGLDV----GGAERMLVRLLKGLDRDRFEHVVISLTDRGE------LGEE----------------------LE 48 (365)
T ss_pred CeEEEEeeccC----ccHHHHHHHHHHHhhhccceEEEEecCcchh------hhHH----------------------HH
Confidence 69999987655 9999999999999999999999998652110 1000 00
Q ss_pred eCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHhhc
Q 006091 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 312 (662)
Q Consensus 233 ~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~~ 312 (662)
..+++++.+..+.. . .....+..+.. .+.. .+||+||+|.+.......+.....
T Consensus 49 ~~~i~v~~~~~~~~------~--------~~~~~~~~~~~----~~~~--------~~~div~~~~~~~~~~~~~~~~~~ 102 (365)
T cd03807 49 EAGVPVYCLGKRPG------R--------PDPGALLRLYK----LIRR--------LRPDVVHTWMYHADLYGGLAARLA 102 (365)
T ss_pred hcCCeEEEEecccc------c--------ccHHHHHHHHH----HHHh--------hCCCEEEeccccccHHHHHHHHhc
Confidence 13666666653321 0 01111111222 2111 169999999877766666555442
Q ss_pred CCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCcc
Q 006091 313 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 392 (662)
Q Consensus 313 ~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~~ 392 (662)
.++|+++++|+...... .+.. .....+.+.....++.++++|+.
T Consensus 103 ------~~~~~i~~~~~~~~~~~-------------~~~~-----------------~~~~~~~~~~~~~~~~~i~~s~~ 146 (365)
T cd03807 103 ------GVPPVIWGIRHSDLDLG-------------KKST-----------------RLVARLRRLLSSFIPLIVANSAA 146 (365)
T ss_pred ------CCCcEEEEecCCccccc-------------chhH-----------------hHHHHHHHHhccccCeEEeccHH
Confidence 47899999997632110 0000 01122344455678999999998
Q ss_pred hhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEEE
Q 006091 393 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 472 (662)
Q Consensus 393 ~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il 472 (662)
..+.+.. ++.+..++.+++||+|...+.+.... +...+++++++ ++.++|+
T Consensus 147 ~~~~~~~----------~~~~~~~~~vi~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~--~~~~~i~ 197 (365)
T cd03807 147 AAEYHQA----------IGYPPKKIVVIPNGVDTERFSPDLDA-----------------RARLREELGLP--EDTFLIG 197 (365)
T ss_pred HHHHHHH----------cCCChhheeEeCCCcCHHhcCCcccc-----------------hHHHHHhcCCC--CCCeEEE
Confidence 8877642 13456789999999998777654322 34566788887 6778999
Q ss_pred EEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHH-hhcCCcEEEEcCCChHHHHHHHHhcCEEEEc
Q 006091 473 FIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTE-ATYKDKYRGWVGFNVPISHRITAGCDILLMP 549 (662)
Q Consensus 473 ~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~P 549 (662)
++|++.+.||++.+++|+..+.+ ++++|+++|.++.. ........ .......+.+.+.. +++..+|+.||++++|
T Consensus 198 ~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~-~~~~~~~~~~~~~~~~v~~~g~~-~~~~~~~~~adi~v~p 275 (365)
T cd03807 198 IVARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPDR-ANLELLALKELGLEDKVILLGER-SDVPALLNALDVFVLS 275 (365)
T ss_pred EecccchhcCHHHHHHHHHHHHHhCCCeEEEEecCCcch-hHHHHHHHHhcCCCceEEEcccc-ccHHHHHHhCCEEEeC
Confidence 99999999999999999999865 48999999998632 22222221 22222333455533 3466899999999999
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 006091 550 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 629 (662)
Q Consensus 550 S~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l 629 (662)
|.+|++|++++|||+||+|||+++.|+..|++.+ +|+++++.|+++++++|..+++ +++.+.++
T Consensus 276 s~~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~------------~g~~~~~~~~~~l~~~i~~l~~----~~~~~~~~ 339 (365)
T cd03807 276 SLSEGFPNVLLEAMACGLPVVATDVGDNAELVGD------------TGFLVPPGDPEALAEAIEALLA----DPALRQAL 339 (365)
T ss_pred CccccCCcHHHHHHhcCCCEEEcCCCChHHHhhc------------CCEEeCCCCHHHHHHHHHHHHh----ChHHHHHH
Confidence 9999999999999999999999999999999964 8999999999999999999987 77778888
Q ss_pred HHHH---HHhcCCHHHHHHHHHHHHH
Q 006091 630 MRRG---MEKDYTWENAAIQYEQVFE 652 (662)
Q Consensus 630 ~~~~---~~~~fs~e~~a~~~~~iy~ 652 (662)
++++ +.++|+|++++++|.++|+
T Consensus 340 ~~~~~~~~~~~~s~~~~~~~~~~~y~ 365 (365)
T cd03807 340 GEAARERIEENFSIEAMVEAYEELYR 365 (365)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 7776 4678999999999999984
No 38
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=100.00 E-value=5.2e-33 Score=299.94 Aligned_cols=349 Identities=15% Similarity=0.118 Sum_probs=232.1
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhC--CCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEE
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR--GHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 229 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~--GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 229 (662)
|||++++..+.. .||+++++.+++++|.++ ||+|.++++..+... .+..
T Consensus 1 mkI~~~~~~~~~---~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~~~----~~~~---------------------- 51 (359)
T PRK09922 1 MKIAFIGEAVSG---FGGMETVISNVINTFEESKINCEMFFFCRNDKMDK----AWLK---------------------- 51 (359)
T ss_pred CeeEEecccccC---CCchhHHHHHHHHHhhhcCcceeEEEEecCCCCCh----HHHH----------------------
Confidence 899999875433 599999999999999999 899999987643210 0000
Q ss_pred EEeeCCceEE-EEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHH
Q 006091 230 HEYREGVDWV-FVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 308 (662)
Q Consensus 230 ~~~~~gv~v~-~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll 308 (662)
.+.+. .++...+. .+ .....+..+ .+.++. .+||+||+|+....+++.++
T Consensus 52 -----~~~~~~~~~~~~~~----~~--------~~~~~~~~l----~~~l~~--------~~~Dii~~~~~~~~~~~~~~ 102 (359)
T PRK09922 52 -----EIKYAQSFSNIKLS----FL--------RRAKHVYNF----SKWLKE--------TQPDIVICIDVISCLYANKA 102 (359)
T ss_pred -----hcchhcccccchhh----hh--------cccHHHHHH----HHHHHh--------cCCCEEEEcCHHHHHHHHHH
Confidence 00000 00000000 00 000111111 122221 27999999986655555555
Q ss_pred HhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEe
Q 006091 309 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 388 (662)
Q Consensus 309 ~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~ 388 (662)
+...+ ...+++.+.|... ..... .....+..+|.+++
T Consensus 103 ~~~~~-----~~~~~~~~~h~~~---------------~~~~~-----------------------~~~~~~~~~d~~i~ 139 (359)
T PRK09922 103 RKKSG-----KQFKIFSWPHFSL---------------DHKKH-----------------------AECKKITCADYHLA 139 (359)
T ss_pred HHHhC-----CCCeEEEEecCcc---------------cccch-----------------------hhhhhhhcCCEEEE
Confidence 44331 2345566666321 00000 00011367999999
Q ss_pred cCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCC
Q 006091 389 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 468 (662)
Q Consensus 389 vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~ 468 (662)
+|+..++.+.. ++.+.+++.+||||+|.+.+...... ..++
T Consensus 140 ~S~~~~~~~~~----------~~~~~~ki~vi~N~id~~~~~~~~~~-----------------------------~~~~ 180 (359)
T PRK09922 140 ISSGIKEQMMA----------RGISAQRISVIYNPVEIKTIIIPPPE-----------------------------RDKP 180 (359)
T ss_pred cCHHHHHHHHH----------cCCCHHHEEEEcCCCCHHHccCCCcc-----------------------------cCCC
Confidence 99998887752 23445689999999996543211100 0346
Q ss_pred CEEEEEecCC--CccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhc---CCcEEEEcCCChHHHHHHHHhc
Q 006091 469 PLIGFIGRLD--YQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATY---KDKYRGWVGFNVPISHRITAGC 543 (662)
Q Consensus 469 ~~Il~vGrl~--~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~ll~~a 543 (662)
++|+++||+. +.||++.+++|+..+.. +++|+++|+|+ ..+.+.+.+.+.. .+.+.|++....+.+.++|+.|
T Consensus 181 ~~i~~~Grl~~~~~k~~~~l~~a~~~~~~-~~~l~ivG~g~-~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~ 258 (359)
T PRK09922 181 AVFLYVGRLKFEGQKNVKELFDGLSQTTG-EWQLHIIGDGS-DFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNV 258 (359)
T ss_pred cEEEEEEEEecccCcCHHHHHHHHHhhCC-CeEEEEEeCCc-cHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhcC
Confidence 7899999986 46999999999998854 79999999995 3333333333322 2334444432335677889999
Q ss_pred CEEEEcCCCCCCcHHHHHHHHcCCcEEEeC-CcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhC
Q 006091 544 DILLMPSRFEPCGLNQLYAMRYGTIPVVHA-TGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREH 622 (662)
Q Consensus 544 Di~v~PS~~E~fgl~~lEAma~G~PvVas~-~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~ 622 (662)
|++++||.+|+||++++||||||+|||+++ .||..|+|.+ +.+|++++++|+++++++|.++++ +
T Consensus 259 d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~----------~~~G~lv~~~d~~~la~~i~~l~~----~ 324 (359)
T PRK09922 259 SALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKP----------GLNGELYTPGNIDEFVGKLNKVIS----G 324 (359)
T ss_pred cEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccC----------CCceEEECCCCHHHHHHHHHHHHh----C
Confidence 999999999999999999999999999999 8999999998 889999999999999999999987 5
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 006091 623 KSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASI 656 (662)
Q Consensus 623 ~~~~~~l~~~~~~~~fs~e~~a~~~~~iy~~~~~ 656 (662)
++.+.........++|+-+...+++.++|..+..
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
T PRK09922 325 EVKYQHDAIPNSIERFYEVLYFKNLNNALFSKLQ 358 (359)
T ss_pred cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 5433222222245789999999999999987653
No 39
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=100.00 E-value=4.1e-33 Score=281.60 Aligned_cols=368 Identities=19% Similarity=0.239 Sum_probs=263.0
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEE
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 231 (662)
++||+|+..|+|. .||++.++++|++.|.+.||.|.|+|-.|.+-.. .+.
T Consensus 1 ~~i~mVsdff~P~--~ggveshiy~lSq~li~lghkVvvithayg~r~g----------------------------iry 50 (426)
T KOG1111|consen 1 SRILMVSDFFYPS--TGGVESHIYALSQCLIRLGHKVVVITHAYGNRVG----------------------------IRY 50 (426)
T ss_pred CcceeeCcccccC--CCChhhhHHHhhcchhhcCCeEEEEeccccCccc----------------------------eee
Confidence 5899999999996 7999999999999999999999999988754110 133
Q ss_pred eeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHhh
Q 006091 232 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 311 (662)
Q Consensus 232 ~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~ 311 (662)
..+|+++|.++.....+.. .+...+.+ +-++-.... ..+..|||-|...+.+.--.+...
T Consensus 51 lt~glkVyylp~~v~~n~t-T~ptv~~~-------~Pllr~i~l------------rE~I~ivhghs~fS~lahe~l~ha 110 (426)
T KOG1111|consen 51 LTNGLKVYYLPAVVGYNQT-TFPTVFSD-------FPLLRPILL------------RERIEIVHGHSPFSYLAHEALMHA 110 (426)
T ss_pred ecCCceEEEEeeeeeeccc-chhhhhcc-------Ccccchhhh------------hhceEEEecCChHHHHHHHHHHHH
Confidence 4467899888855432211 11110001 111111111 114689999986665543333322
Q ss_pred cCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCc
Q 006091 312 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 391 (662)
Q Consensus 312 ~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~ 391 (662)
+- .|.++|+|-|++. |..+ +...+.+ .++...+...|++||||.
T Consensus 111 rt-----MGlktVfTdHSlf--Gfad--------~~si~~n---------------------~ll~~sL~~id~~IcVsh 154 (426)
T KOG1111|consen 111 RT-----MGLKTVFTDHSLF--GFAD--------IGSILTN---------------------KLLPLSLANIDRIICVSH 154 (426)
T ss_pred Hh-----cCceEEEeccccc--cccc--------hhhhhhc---------------------ceeeeeecCCCcEEEEee
Confidence 21 6899999999852 1111 1111211 122334578899999999
Q ss_pred chhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEE
Q 006091 392 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 471 (662)
Q Consensus 392 ~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~I 471 (662)
..++...- . -...++++.+|||.+++..|.|.... -+ +.+...|
T Consensus 155 tskentvl-------r--~~L~p~kvsvIPnAv~~~~f~P~~~~--------------------------~~-S~~i~~i 198 (426)
T KOG1111|consen 155 TSKENTVL-------R--GALAPAKVSVIPNAVVTHTFTPDAAD--------------------------KP-SADIITI 198 (426)
T ss_pred cCCCceEE-------E--eccCHhHeeeccceeeccccccCccc--------------------------cC-CCCeeEE
Confidence 87765431 0 12457899999999999999885432 01 0233689
Q ss_pred EEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCCh--hhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEE
Q 006091 472 GFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDP--QFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILL 547 (662)
Q Consensus 472 l~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v 547 (662)
+.++|+.++||+|+++++++++.+ ++++|+|+|+|+. .+++.+++.....++.++|-+ +.+.+.+.|.+-|||+
T Consensus 199 vv~sRLvyrKGiDll~~iIp~vc~~~p~vrfii~GDGPk~i~lee~lEk~~l~~rV~~lG~v--~h~~Vr~vl~~G~IFl 276 (426)
T KOG1111|consen 199 VVASRLVYRKGIDLLLEIIPSVCDKHPEVRFIIIGDGPKRIDLEEMLEKLFLQDRVVMLGTV--PHDRVRDVLVRGDIFL 276 (426)
T ss_pred EEEeeeeeccchHHHHHHHHHHHhcCCCeeEEEecCCcccchHHHHHHHhhccCceEEeccc--chHHHHHHHhcCcEEe
Confidence 999999999999999999999976 6999999999973 345555555555566677776 5566889999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHH
Q 006091 548 MPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWE 627 (662)
Q Consensus 548 ~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~ 627 (662)
+||..|+||++++|||+||++||+|++||++|++.+ + -.......++++++++.+++..+...|+..-
T Consensus 277 ntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~-----------d-~i~~~~~~~~dl~~~v~~ai~~~~~~p~~~h 344 (426)
T KOG1111|consen 277 NTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPE-----------D-MITLGEPGPDDLVGAVEKAITKLRTLPLEFH 344 (426)
T ss_pred ccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCc-----------c-ceeccCCChHHHHHHHHHHHHHhccCchhHH
Confidence 999999999999999999999999999999999987 2 3334556799999999999987655543322
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhhhCCC
Q 006091 628 GLMRRGMEKDYTWENAAIQYEQVFEWASIDPP 659 (662)
Q Consensus 628 ~l~~~~~~~~fs~e~~a~~~~~iy~~~~~~~~ 659 (662)
..+.+.|+|+.++++.+++|.++....+
T Consensus 345 ----~~v~~~y~w~dVa~rTekvy~r~~~t~~ 372 (426)
T KOG1111|consen 345 ----DRVKKMYSWKDVAERTEKVYDRAATTSI 372 (426)
T ss_pred ----HHHHHhccHHHHHHHHHHHHHHHhhccC
Confidence 2256789999999999999999876553
No 40
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=6.6e-33 Score=309.94 Aligned_cols=422 Identities=17% Similarity=0.186 Sum_probs=268.4
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEE--E
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF--H 230 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~ 230 (662)
+||+|+.-.+||. .||++..+++|.++|-+.-..|..|++... ..++..|.-+.+......+.+.+........ .
T Consensus 1 ~v~l~~egtyp~~-~ggvs~w~~~~i~~~p~~~f~~~~~~~~~~--~~~~~~y~~p~nv~~~~~~~l~~~~~~~~~~~~~ 77 (475)
T cd03813 1 DVCLVLEGTYPYV-RGGVSSWVHQLITGLPEHTFAVVFIGADPE--DYGEFKYELPPNVVHVEEVPLWSELPPPNRLSDS 77 (475)
T ss_pred CeEEEEecCCCCc-CCchhHHHHHHHhhCCCceEEEEEEecCcc--ccCCccccCCCCcceEEEEEccCcccccccccch
Confidence 5999999999985 999999999999999999888888876632 1223456655566555556554322110000 0
Q ss_pred Ee---eCCc----eEE-E----EeCCC-------CC---CC------CCCCCC--------------CCCCCCchhHHHH
Q 006091 231 EY---REGV----DWV-F----VDHPS-------YH---RP------GNPYGD--------------INGAFGDNQFRYT 268 (662)
Q Consensus 231 ~~---~~gv----~v~-~----i~~~~-------~~---~~------~~~y~~--------------~~~~~~~~~~~~~ 268 (662)
.. .+.+ .-. . ..... +. .. ..+++. ....|.+-++...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (475)
T cd03813 78 AGKAILRALLREVLLLFLTTFLPIIELEDLALELLRELLGKNEGSLTDFLYSKEFWEMLTELYREYCTDPSFVDYFWTVR 157 (475)
T ss_pred hhHHHHHHHHHHHhhhccccccccccchHHHHHHHHHhcccccccHHHHhcCHHHHHHHHHHHHccCCCCCHHHHHHHHH
Confidence 00 0000 000 0 00000 00 00 000000 0001111111111
Q ss_pred HHHHHHhhhccccCCCCCCCCCccEEEeCCCC-cchHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCC
Q 006091 269 LLCYAACEAPLVLPLGGFTYGEKCIFLVNDWH-AGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLP 347 (662)
Q Consensus 269 ~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~-~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~ 347 (662)
.+...+...+. ....++||||+|... +++++.+++.. .++|+|+|.|+... ......+. .
T Consensus 158 ~~~~~l~~~l~------~~~~~~dviH~~s~~~~g~~~~~~~~~-------~~~p~I~t~Hg~~~-----~e~~~~~~-~ 218 (475)
T cd03813 158 NMLSPLLAAIA------RPLPKADVYHAVSTGYAGLLGALAKAR-------RGTPFLLTEHGIYT-----RERKIELL-Q 218 (475)
T ss_pred HHHHHHHHHhc------cCCCCCCEEeccCcchHHHHHHHHHHH-------hCCCEEEecCCccH-----HHHHHHHH-h
Confidence 11222211111 113478999999743 34445554443 58999999997521 11000000 0
Q ss_pred hhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCC
Q 006091 348 SEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDIT 427 (662)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~ 427 (662)
..|... +.-..|. .....+.+.+++.||.|+++|+..++... .++.+++|+.+||||+|.+
T Consensus 219 ~~~~~~--~~~~~~~-------~~~~~l~~~~~~~ad~Ii~~s~~~~~~~~----------~~g~~~~ki~vIpNgid~~ 279 (475)
T cd03813 219 ADWEMS--YFRRLWI-------RFFESLGRLAYQAADRITTLYEGNRERQI----------EDGADPEKIRVIPNGIDPE 279 (475)
T ss_pred cccchH--HHHHHHH-------HHHHHHHHHHHHhCCEEEecCHHHHHHHH----------HcCCCHHHeEEeCCCcCHH
Confidence 000000 0000010 11234567788999999999998776543 1345667899999999998
Q ss_pred CCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeC
Q 006091 428 EWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGS 505 (662)
Q Consensus 428 ~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~ 505 (662)
.|.+.... ..+ .+.++|+|+||+.+.||++.+++|++.+.+ ++++|+|+|+
T Consensus 280 ~f~~~~~~-------------------------~~~--~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~ 332 (475)
T cd03813 280 RFAPARRA-------------------------RPE--KEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGP 332 (475)
T ss_pred HcCCcccc-------------------------ccC--CCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECC
Confidence 87654310 011 467899999999999999999999998865 5899999999
Q ss_pred CC--hhhHHHHHHHHhhcC-CcEEEEcCCChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccc
Q 006091 506 GD--PQFESWMRDTEATYK-DKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVE 582 (662)
Q Consensus 506 g~--~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~ 582 (662)
++ +.+.+.++.+..... ...+.+.| .+.+.++|+.+|++++||..|+||++++||||||+|||+|+.|++.|++.
T Consensus 333 g~~~~~~~~e~~~li~~l~l~~~V~f~G--~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~ 410 (475)
T cd03813 333 TDEDPEYAEECRELVESLGLEDNVKFTG--FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIE 410 (475)
T ss_pred CCcChHHHHHHHHHHHHhCCCCeEEEcC--CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhc
Confidence 84 334444444443332 23444566 23356899999999999999999999999999999999999999999998
Q ss_pred cccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH---HHhcCCHHHHHHHHHHHHH
Q 006091 583 NFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFE 652 (662)
Q Consensus 583 ~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~---~~~~fs~e~~a~~~~~iy~ 652 (662)
+.+.. .-|.+|+++++.|+++++++|.++++ |++.++++++++ +.+.|+|++++++|.++|+
T Consensus 411 ~~~~~----~~g~~G~lv~~~d~~~la~ai~~ll~----~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 411 GADDE----ALGPAGEVVPPADPEALARAILRLLK----DPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred CCccc----ccCCceEEECCCCHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 72110 01359999999999999999999987 888899998887 4688999999999999984
No 41
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=100.00 E-value=3.8e-32 Score=291.05 Aligned_cols=348 Identities=16% Similarity=0.108 Sum_probs=235.6
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEe
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 232 (662)
||++++..+ + .||.++++.+++++|.+.||+|+++++..... .+... ..
T Consensus 1 kIl~~~~~~-~---~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~-----~~~~~----------------------~~ 49 (358)
T cd03812 1 KILHIVGTM-N---RGGIETFIMNYYRNLDRSKIQFDFLVTSKEEG-----DYDDE----------------------IE 49 (358)
T ss_pred CEEEEeCCC-C---CccHHHHHHHHHHhcCccceEEEEEEeCCCCc-----chHHH----------------------HH
Confidence 799999865 3 69999999999999999999999999764221 01100 01
Q ss_pred eCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHhhc
Q 006091 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 312 (662)
Q Consensus 233 ~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~~ 312 (662)
..++.++.++... .....+. ..+.+.+. ..+|||||+|......++.++....
T Consensus 50 ~~~~~~~~~~~~~----------------~~~~~~~---~~~~~~~~--------~~~~Dvv~~~~~~~~~~~~~~~~~~ 102 (358)
T cd03812 50 KLGGKIYYIPARK----------------KNPLKYF---KKLYKLIK--------KNKYDIVHVHGSSASGFILLAAKKA 102 (358)
T ss_pred HcCCeEEEecCCC----------------ccHHHHH---HHHHHHHh--------cCCCCEEEEeCcchhHHHHHHHhhC
Confidence 1345554432111 0111111 11111111 1279999999876555555554432
Q ss_pred CCCCCCCCCc-EEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCc
Q 006091 313 RPHGVYKDAR-SILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 391 (662)
Q Consensus 313 ~~~~~~~gip-~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~ 391 (662)
+.| ++++.|+..+...... .. .....+.+..+..++.++++|+
T Consensus 103 -------~~~~~v~~~~~~~~~~~~~~----------~~-------------------~~~~~~~~~~~~~~~~~i~~s~ 146 (358)
T cd03812 103 -------GVKVRIAHSHNTSDSHDKKK----------KI-------------------LKYKVLRKLINRLATDYLACSE 146 (358)
T ss_pred -------CCCeEEEEeccccccccccc----------hh-------------------hHHHHHHHHHHhcCCEEEEcCH
Confidence 344 4677786532111000 00 0001234556678999999999
Q ss_pred chhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEE
Q 006091 392 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 471 (662)
Q Consensus 392 ~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~I 471 (662)
...+.+.. . ....++.+||||+|.+.+.+.... +.. +++.+.. .++++|
T Consensus 147 ~~~~~~~~---------~--~~~~~~~vi~ngvd~~~~~~~~~~-----------------~~~-~~~~~~~--~~~~~i 195 (358)
T cd03812 147 EAGKWLFG---------K--VKNKKFKVIPNGIDLEKFIFNEEI-----------------RKK-RRELGIL--EDKFVI 195 (358)
T ss_pred HHHHHHHh---------C--CCcccEEEEeccCcHHHcCCCchh-----------------hhH-HHHcCCC--CCCEEE
Confidence 88876642 1 345789999999998877654321 111 4455544 578899
Q ss_pred EEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEEEc
Q 006091 472 GFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMP 549 (662)
Q Consensus 472 l~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~P 549 (662)
+|+||+.+.||++.+++|+..+.+ ++++|+|+|+|+ ....+.+.+........+.+.|+ .+++..+|+.||++|+|
T Consensus 196 ~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~-~~~~~~~~~~~~~~~~~v~~~g~-~~~~~~~~~~adi~v~p 273 (358)
T cd03812 196 GHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGE-LEEEIKKKVKELGLEDKVIFLGV-RNDVPELLQAMDVFLFP 273 (358)
T ss_pred EEEeccccccChHHHHHHHHHHHHhCCCeEEEEEeCCc-hHHHHHHHHHhcCCCCcEEEecc-cCCHHHHHHhcCEEEec
Confidence 999999999999999999999975 489999999996 22333333333222233445565 34466899999999999
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 006091 550 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 629 (662)
Q Consensus 550 S~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l 629 (662)
|.+|++|++++||||+|+|||+|+.||.+|++.+ +.|++..+.++++++++|.++++ +++..+.+
T Consensus 274 s~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~-----------~~~~~~~~~~~~~~a~~i~~l~~----~~~~~~~~ 338 (358)
T cd03812 274 SLYEGLPLVLIEAQASGLPCILSDTITKEVDLTD-----------LVKFLSLDESPEIWAEEILKLKS----EDRRERSS 338 (358)
T ss_pred ccccCCCHHHHHHHHhCCCEEEEcCCchhhhhcc-----------CccEEeCCCCHHHHHHHHHHHHh----Ccchhhhh
Confidence 9999999999999999999999999999999987 46777777789999999999997 78777777
Q ss_pred HHHHHHhcCCHHH
Q 006091 630 MRRGMEKDYTWEN 642 (662)
Q Consensus 630 ~~~~~~~~fs~e~ 642 (662)
...+..+.-+++.
T Consensus 339 ~~~~~~~~~~~~~ 351 (358)
T cd03812 339 ESIKKKGLDADDE 351 (358)
T ss_pred hhhhhccchhhhh
Confidence 7766444334333
No 42
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=2.9e-32 Score=293.44 Aligned_cols=272 Identities=16% Similarity=0.172 Sum_probs=205.8
Q ss_pred CccEEEeCCCCcchHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCc
Q 006091 290 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT 369 (662)
Q Consensus 290 ~pDVVh~h~~~~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 369 (662)
+|||||+|....++....+..+ .++|+|+++|+....... ... .... +
T Consensus 82 ~~dvvh~~~~~~~~~~~~~~~~-------~~~p~i~~~h~~~~~~~~---~~~-------~~~~---------------~ 129 (367)
T cd05844 82 RPDLVHAHFGFDGVYALPLARR-------LGVPLVVTFHGFDATTSL---ALL-------LRSR---------------W 129 (367)
T ss_pred CCCEEEeccCchHHHHHHHHHH-------cCCCEEEEEeCccccccc---hhh-------cccc---------------h
Confidence 7999999976555555444433 589999999975211000 000 0000 0
Q ss_pred chhhhHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchh
Q 006091 370 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGK 449 (662)
Q Consensus 370 ~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~ 449 (662)
.....+++..++.+|.++++|+..++.+.. .+.+..++.+++||+|.+.+.+....
T Consensus 130 ~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~----------~~~~~~~i~vi~~g~d~~~~~~~~~~-------------- 185 (367)
T cd05844 130 ALYARRRRRLARRAALFIAVSQFIRDRLLA----------LGFPPEKVHVHPIGVDTAKFTPATPA-------------- 185 (367)
T ss_pred hHHHHHHHHHHHhcCEEEECCHHHHHHHHH----------cCCCHHHeEEecCCCCHHhcCCCCCC--------------
Confidence 122345667778999999999998887753 13456789999999998776543211
Q ss_pred HHhHHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhh--cCCcE
Q 006091 450 VQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT--YKDKY 525 (662)
Q Consensus 450 ~~~k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~--~~~~~ 525 (662)
.+.++++|+|++.+.||++.+++|++.+.+ ++++|+++|+|+ . ...++.+... ...++
T Consensus 186 ----------------~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~-~-~~~~~~~~~~~~~~~~v 247 (367)
T cd05844 186 ----------------RRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGP-L-LAALEALARALGLGGRV 247 (367)
T ss_pred ----------------CCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCch-H-HHHHHHHHHHcCCCCeE
Confidence 356789999999999999999999999865 489999999985 2 2333333333 22333
Q ss_pred EEEcCC-ChHHHHHHHHhcCEEEEcCC------CCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceE
Q 006091 526 RGWVGF-NVPISHRITAGCDILLMPSR------FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGW 598 (662)
Q Consensus 526 ~~~~~~-~~~~~~~ll~~aDi~v~PS~------~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~ 598 (662)
.+.++ +.+++..+|+.||++++||. .|+||++++|||+||+|||+++.+++.|++.+ +.+|+
T Consensus 248 -~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~----------~~~g~ 316 (367)
T cd05844 248 -TFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVED----------GETGL 316 (367)
T ss_pred -EECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheec----------CCeeE
Confidence 34544 45667799999999999997 49999999999999999999999999999988 88999
Q ss_pred EECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH---HHhcCCHHHHHHHHHHH
Q 006091 599 SFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQV 650 (662)
Q Consensus 599 l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~---~~~~fs~e~~a~~~~~i 650 (662)
++++.|+++++++|.++++ +++++.+++.++ +.++|+|+.+++++.++
T Consensus 317 ~~~~~d~~~l~~~i~~l~~----~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~i 367 (367)
T cd05844 317 LVPEGDVAALAAALGRLLA----DPDLRARMGAAGRRRVEERFDLRRQTAKLEAL 367 (367)
T ss_pred EECCCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence 9999999999999999887 788888888776 45799999999998753
No 43
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=100.00 E-value=5.1e-32 Score=287.81 Aligned_cols=357 Identities=21% Similarity=0.180 Sum_probs=238.5
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEe
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 232 (662)
||++++..++|. ..||.++++.+|+++|+++||+|+|+++....... ...
T Consensus 1 kIl~i~~~~~~~-~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~---~~~-------------------------- 50 (359)
T cd03823 1 RILVVNHLYPPR-SVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQ---DKE-------------------------- 50 (359)
T ss_pred CeeEEcccCCcc-cccchHHHHHHHHHHHHhcCCceEEEeCCCCCCCc---ccc--------------------------
Confidence 799999988774 47999999999999999999999999876422110 000
Q ss_pred eCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHhhc
Q 006091 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 312 (662)
Q Consensus 233 ~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~~ 312 (662)
............. .......... +.........+...+.+.+.. .+||+||+|.+.......+...+.
T Consensus 51 ~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--------~~~dii~~~~~~~~~~~~~~~~~~ 118 (359)
T cd03823 51 VIGVVVYGRPIDE-VLRSALPRDL---FHLSDYDNPAVVAEFARLLED--------FRPDVVHFHHLQGLGVSILRAARD 118 (359)
T ss_pred cccceeecccccc-ccCCCchhhh---hHHHhccCHHHHHHHHHHHHH--------cCCCEEEECCccchHHHHHHHHHh
Confidence 0011111100000 0000000000 000000000111112222211 279999999874433333322222
Q ss_pred CCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCcc
Q 006091 313 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 392 (662)
Q Consensus 313 ~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~~ 392 (662)
.++|+++++|+.... .+. ..+ .....|.++++|+.
T Consensus 119 ------~~~~~i~~~hd~~~~--~~~---------~~~----------------------------~~~~~d~ii~~s~~ 153 (359)
T cd03823 119 ------RGIPIVLTLHDYWLI--CPR---------QGL----------------------------FKKGGDAVIAPSRF 153 (359)
T ss_pred ------cCCCEEEEEeeeeee--cch---------hhh----------------------------hccCCCEEEEeCHH
Confidence 579999999975210 000 000 01123999999998
Q ss_pred hhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEEE
Q 006091 393 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 472 (662)
Q Consensus 393 ~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il 472 (662)
..+.+... .....++.+|+||+|...+.+... +.+ .++++|+
T Consensus 154 ~~~~~~~~----------~~~~~~~~vi~n~~~~~~~~~~~~--------------------------~~~--~~~~~i~ 195 (359)
T cd03823 154 LLDRYVAN----------GLFAEKISVIRNGIDLDRAKRPRR--------------------------APP--GGRLRFG 195 (359)
T ss_pred HHHHHHHc----------CCCccceEEecCCcChhhcccccc--------------------------CCC--CCceEEE
Confidence 88777521 122468999999999887654321 112 4667899
Q ss_pred EEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEEEcCC-
Q 006091 473 FIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSR- 551 (662)
Q Consensus 473 ~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~PS~- 551 (662)
|+|++.+.||++.++++++.+.+++++|+++|.++........ .....++.+.+++ +.+++..+|+.||++++||.
T Consensus 196 ~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~G~~~~~~~~~~~-~~~~~~v~~~g~~--~~~~~~~~~~~ad~~i~ps~~ 272 (359)
T cd03823 196 FIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEESYE-LEGDPRVEFLGAY--PQEEIDDFYAEIDVLVVPSIW 272 (359)
T ss_pred EEecCccccCHHHHHHHHHHHHhcCcEEEEEcCchhhhHHHHh-hcCCCeEEEeCCC--CHHHHHHHHHhCCEEEEcCcc
Confidence 9999999999999999999987678999999998643222111 1111223333333 45677899999999999998
Q ss_pred CCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHH
Q 006091 552 FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMR 631 (662)
Q Consensus 552 ~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~ 631 (662)
.|++|++++|||+||+|||+++.++..|++.+ +.+|+++++.|+++++++|.++++ +++.+.++++
T Consensus 273 ~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~----------~~~g~~~~~~d~~~l~~~i~~l~~----~~~~~~~~~~ 338 (359)
T cd03823 273 PENFPLVIREALAAGVPVIASDIGGMAELVRD----------GVNGLLFPPGDAEDLAAALERLID----DPDLLERLRA 338 (359)
T ss_pred cCCCChHHHHHHHCCCCEEECCCCCHHHHhcC----------CCcEEEECCCCHHHHHHHHHHHHh----ChHHHHHHHH
Confidence 69999999999999999999999999999998 789999999999999999999987 8888888888
Q ss_pred HHHHhcCCHHHHHHHHHHHHH
Q 006091 632 RGMEKDYTWENAAIQYEQVFE 652 (662)
Q Consensus 632 ~~~~~~fs~e~~a~~~~~iy~ 652 (662)
++.. .++.+.++++|+++|+
T Consensus 339 ~~~~-~~~~~~~~~~~~~~~~ 358 (359)
T cd03823 339 GIEP-PRSIEDQAEEYLKLYR 358 (359)
T ss_pred hHHH-hhhHHHHHHHHHHHhh
Confidence 7643 3455999999999986
No 44
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=100.00 E-value=9.4e-32 Score=286.42 Aligned_cols=367 Identities=20% Similarity=0.234 Sum_probs=242.2
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEe
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 232 (662)
||++|+..++|. .||.++++.+++++|++.||+|+|+++........ ..
T Consensus 1 kIl~i~~~~~~~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~---~~-------------------------- 49 (375)
T cd03821 1 KILHVIPSFDPK--YGGPVRVVLNLSKALAKLGHEVTVATTDAGGDPLL---VA-------------------------- 49 (375)
T ss_pred CeEEEcCCCCcc--cCCeehHHHHHHHHHHhcCCcEEEEecCCCCccch---hh--------------------------
Confidence 799999988764 79999999999999999999999998764321100 00
Q ss_pred eCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCc-chHHHHHHhh
Q 006091 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHA-GLVPVLLASK 311 (662)
Q Consensus 233 ~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~-~l~~~ll~~~ 311 (662)
............ .... .. .....+.......... ...+||+||+|+... .........+
T Consensus 50 ~~~~~~~~~~~~-~~~~---~~-------~~~~~~~~~~~~~~~~---------~~~~~dii~~~~~~~~~~~~~~~~~~ 109 (375)
T cd03821 50 LNGVPVKLFSIN-VAYG---LN-------LARYLFPPSLLAWLRL---------NIREADIVHVHGLWSYPSLAAARAAR 109 (375)
T ss_pred ccCceeeecccc-hhhh---hh-------hhhhccChhHHHHHHH---------hCCCCCEEEEecccchHHHHHHHHHH
Confidence 000000000000 0000 00 0000000000000000 012689999998333 2222222222
Q ss_pred cCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCc
Q 006091 312 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 391 (662)
Q Consensus 312 ~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~ 391 (662)
. .++|++++.|+........ ...+.. ........+..+..++.++++|.
T Consensus 110 ~------~~~~~i~~~~~~~~~~~~~----------~~~~~~---------------~~~~~~~~~~~~~~~~~i~~~s~ 158 (375)
T cd03821 110 K------YGIPYVVSPHGMLDPWALP----------HKALKK---------------RLAWFLFERRLLQAAAAVHATSE 158 (375)
T ss_pred H------hCCCEEEEccccccccccc----------cchhhh---------------HHHHHHHHHHHHhcCCEEEECCH
Confidence 2 5799999999753111000 000000 00112234566778999999986
Q ss_pred chhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEE
Q 006091 392 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 471 (662)
Q Consensus 392 ~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~I 471 (662)
........ .....++.+||||+|...+.+.... ..++.++.+ .+.++|
T Consensus 159 ~~~~~~~~-----------~~~~~~~~vi~~~~~~~~~~~~~~~-------------------~~~~~~~~~--~~~~~i 206 (375)
T cd03821 159 QEAAEIRR-----------LGLKAPIAVIPNGVDIPPFAALPSR-------------------GRRRKFPIL--PDKRII 206 (375)
T ss_pred HHHHHHHh-----------hCCcccEEEcCCCcChhccCcchhh-------------------hhhhhccCC--CCCcEE
Confidence 65554431 2345689999999998877654321 114555555 678899
Q ss_pred EEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhh-cCCcEEEEcCC-ChHHHHHHHHhcCEEE
Q 006091 472 GFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT-YKDKYRGWVGF-NVPISHRITAGCDILL 547 (662)
Q Consensus 472 l~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~-~~~~~~~~~~~-~~~~~~~ll~~aDi~v 547 (662)
+|+||+.+.||++.+++|+..+.+ ++++|+++|.++..+...++.+... .....+.+.|+ +.+++..+|+.||+++
T Consensus 207 ~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v 286 (375)
T cd03821 207 LFLGRLHPKKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADLFV 286 (375)
T ss_pred EEEeCcchhcCHHHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhCCEEE
Confidence 999999999999999999999977 5899999999865555555544222 22222334444 4456778999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHH
Q 006091 548 MPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWE 627 (662)
Q Consensus 548 ~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~ 627 (662)
+||.+|+||++++|||+||+|||+++.+|+.+++.+ .+|++++. +.++++++|.++++ +++.++
T Consensus 287 ~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-----------~~~~~~~~-~~~~~~~~i~~l~~----~~~~~~ 350 (375)
T cd03821 287 LPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-----------GCGWVVDD-DVDALAAALRRALE----LPQRLK 350 (375)
T ss_pred eccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-----------CceEEeCC-ChHHHHHHHHHHHh----CHHHHH
Confidence 999999999999999999999999999999999986 68888865 56999999999987 777788
Q ss_pred HHHHHH---HHhcCCHHHHHHHHHH
Q 006091 628 GLMRRG---MEKDYTWENAAIQYEQ 649 (662)
Q Consensus 628 ~l~~~~---~~~~fs~e~~a~~~~~ 649 (662)
++++++ +.++|+|++++++|++
T Consensus 351 ~~~~~~~~~~~~~~s~~~~~~~~~~ 375 (375)
T cd03821 351 AMGENGRALVEERFSWTAIAQQLLE 375 (375)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHhhC
Confidence 887776 4799999999999863
No 45
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=100.00 E-value=4.2e-32 Score=289.76 Aligned_cols=359 Identities=18% Similarity=0.178 Sum_probs=250.0
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEe
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 232 (662)
||++++..+.|. ..||+++++.+|+++|++.||+|++++........... .
T Consensus 1 ~ili~~~~~~~~-~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~----------------------------~ 51 (365)
T cd03809 1 RILIDARFLASR-RPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLP----------------------------L 51 (365)
T ss_pred CEEEechhhhcC-CCCcHHHHHHHHHHHHHhcCCceEEEEecCcccccccc----------------------------c
Confidence 699999988773 47999999999999999999999999977432111000 0
Q ss_pred eCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHhhc
Q 006091 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 312 (662)
Q Consensus 233 ~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~~ 312 (662)
...... ..... +. .....+............ ..+||+||+|.+..... +.
T Consensus 52 ~~~~~~--~~~~~-------~~-------~~~~~~~~~~~~~~~~~~--------~~~~Dii~~~~~~~~~~------~~ 101 (365)
T cd03809 52 RAALRL--LLRLP-------RR-------LLWGLLFLLRAGDRLLLL--------LLGLDLLHSPHNTAPLL------RL 101 (365)
T ss_pred hhcccc--ccccc-------cc-------cccchhhHHHHHHHHHhh--------hcCCCeeeecccccCcc------cC
Confidence 000000 00000 00 000011111111111111 12699999998666543 22
Q ss_pred CCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCcc
Q 006091 313 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 392 (662)
Q Consensus 313 ~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~~ 392 (662)
.++|+++++|++...... ... .... ......+++..+..+|.++++|+.
T Consensus 102 ------~~~~~i~~~hd~~~~~~~-----~~~--~~~~------------------~~~~~~~~~~~~~~~d~~i~~s~~ 150 (365)
T cd03809 102 ------RGVPVVVTIHDLIPLRFP-----EYF--SPGF------------------RRYFRRLLRRALRRADAIITVSEA 150 (365)
T ss_pred ------CCCCEEEEeccchhhhCc-----ccC--CHHH------------------HHHHHHHHHHHHHHcCEEEEccHH
Confidence 689999999986321110 000 0000 012335677788999999999999
Q ss_pred hhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEEE
Q 006091 393 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 472 (662)
Q Consensus 393 ~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il 472 (662)
.++.+. +.++.+..++.++|||+|...+.+.... . +...... .+.++|+
T Consensus 151 ~~~~~~---------~~~~~~~~~~~vi~~~~~~~~~~~~~~~-------------------~-~~~~~~~--~~~~~i~ 199 (365)
T cd03809 151 TKRDLL---------RYLGVPPDKIVVIPLGVDPRFRPPPAEA-------------------E-VLRALYL--LPRPYFL 199 (365)
T ss_pred HHHHHH---------HHhCcCHHHEEeeccccCccccCCCchH-------------------H-HHHHhcC--CCCCeEE
Confidence 888875 2344456789999999998877654321 1 2233333 4678999
Q ss_pred EEecCCCccCHHHHHHHHHhccCC--CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCC-ChHHHHHHHHhcCEEEEc
Q 006091 473 FIGRLDYQKGIDLIRLAAPEILAD--DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGCDILLMP 549 (662)
Q Consensus 473 ~vGrl~~~Kg~d~Ll~A~~~l~~~--d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~ll~~aDi~v~P 549 (662)
|+|++.+.||++.+++++..+.+. +++|+++|.+..........+........+.+.++ +.+++..+|+.||++++|
T Consensus 200 ~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~p 279 (365)
T cd03809 200 YVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFP 279 (365)
T ss_pred EeCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhccc
Confidence 999999999999999999999765 58999999876544444443333222233334444 456678999999999999
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 006091 550 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 629 (662)
Q Consensus 550 S~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l 629 (662)
|.+|++|++++|||++|+|||+++.|++.|++.+ +|+++++.|+++++++|.+++. +++.+.++
T Consensus 280 s~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~------------~~~~~~~~~~~~~~~~i~~l~~----~~~~~~~~ 343 (365)
T cd03809 280 SLYEGFGLPVLEAMACGTPVIASNISSLPEVAGD------------AALYFDPLDPEALAAAIERLLE----DPALREEL 343 (365)
T ss_pred chhccCCCCHHHHhcCCCcEEecCCCCccceecC------------ceeeeCCCCHHHHHHHHHHHhc----CHHHHHHH
Confidence 9999999999999999999999999999998855 7899999999999999999876 88888888
Q ss_pred HHHH--HHhcCCHHHHHHHHH
Q 006091 630 MRRG--MEKDYTWENAAIQYE 648 (662)
Q Consensus 630 ~~~~--~~~~fs~e~~a~~~~ 648 (662)
++++ ..++|+|++++++|.
T Consensus 344 ~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 344 RERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred HHHHHHHHHhCCHHHHHHHHh
Confidence 8877 468899999999886
No 46
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=3.3e-31 Score=283.18 Aligned_cols=350 Identities=19% Similarity=0.186 Sum_probs=239.7
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEe
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 232 (662)
||++|+..|+|. .||.++++.+|+++|.++||+|+|++........ ...
T Consensus 1 kil~i~~~~~p~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~-----------------------------~~~ 49 (357)
T cd03795 1 RVLHVGKFYPPD--RGGIEQVIRDLAEGLAARGIEVAVLCASPEPKGR-----------------------------DEE 49 (357)
T ss_pred CeeEecCCCCCC--CCcHHHHHHHHHHHHHhCCCceEEEecCCCCcch-----------------------------hhh
Confidence 799999998885 7999999999999999999999999876322110 001
Q ss_pred eCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHhhc
Q 006091 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 312 (662)
Q Consensus 233 ~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~~ 312 (662)
..+.++++++..... ....+ . +..+.... . ...+||+||+|..........+...
T Consensus 50 ~~~~~~~~~~~~~~~-~~~~~----------~--~~~~~~~~--~---------~~~~~Dii~~~~~~~~~~~~~~~~~- 104 (357)
T cd03795 50 RNGHRVIRAPSLLNV-ASTPF----------S--PSFFKQLK--K---------LAKKADVIHLHFPNPLADLALLLLP- 104 (357)
T ss_pred ccCceEEEeeccccc-ccccc----------c--HHHHHHHH--h---------cCCCCCEEEEecCcchHHHHHHHhc-
Confidence 123344433321100 00000 0 00111000 0 0227999999975443222222211
Q ss_pred CCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCcc
Q 006091 313 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 392 (662)
Q Consensus 313 ~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~~ 392 (662)
.++|++++.|+..... .... .....+++..+..+|.++++|+.
T Consensus 105 ------~~~~~i~~~h~~~~~~--------------~~~~-----------------~~~~~~~~~~~~~~d~vi~~s~~ 147 (357)
T cd03795 105 ------RKKPVVVHWHSDIVKQ--------------KLLL-----------------KLYRPLQRRFLRRADAIVATSPN 147 (357)
T ss_pred ------cCceEEEEEcChhhcc--------------chhh-----------------hhhhHHHHHHHHhcCEEEeCcHH
Confidence 4789999999632110 0000 11224567788999999999999
Q ss_pred hhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEEE
Q 006091 393 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 472 (662)
Q Consensus 393 ~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il 472 (662)
+.+.+.. .. ....++.+||||+|...+.+.... +. .....+ .+.++|+
T Consensus 148 ~~~~~~~---------~~-~~~~~~~~i~~gi~~~~~~~~~~~-----------------~~---~~~~~~--~~~~~i~ 195 (357)
T cd03795 148 YAETSPV---------LR-RFRDKVRVIPLGLDPARYPRPDAL-----------------EE---AIWRRA--AGRPFFL 195 (357)
T ss_pred HHHHHHH---------hc-CCccceEEecCCCChhhcCCcchh-----------------hh---HhhcCC--CCCcEEE
Confidence 8876532 11 223689999999998877654321 00 112222 4678999
Q ss_pred EEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHH-hhcCCcEEEEcCC-ChHHHHHHHHhcCEEEEcC
Q 006091 473 FIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTE-ATYKDKYRGWVGF-NVPISHRITAGCDILLMPS 550 (662)
Q Consensus 473 ~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~-~~~~~~~~~~~~~-~~~~~~~ll~~aDi~v~PS 550 (662)
|+||+.+.||++.+++|++++. +++|+|+|+|+ ... .+..+. .......+.+.|+ +.+++..+|+.||++++||
T Consensus 196 ~~G~~~~~K~~~~li~a~~~l~--~~~l~i~G~g~-~~~-~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps 271 (357)
T cd03795 196 FVGRLVYYKGLDVLLEAAAALP--DAPLVIVGEGP-LEA-ELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFPS 271 (357)
T ss_pred EecccccccCHHHHHHHHHhcc--CcEEEEEeCCh-hHH-HHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEeCC
Confidence 9999999999999999999996 89999999985 222 333333 2222222233443 4566778999999999999
Q ss_pred C--CCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHH
Q 006091 551 R--FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEG 628 (662)
Q Consensus 551 ~--~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~ 628 (662)
. .|+||++++|||++|+|||+++.++..+.+.+ .+++|+++++.|+++++++|..+++ +++.+.+
T Consensus 272 ~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---------~~~~g~~~~~~d~~~~~~~i~~l~~----~~~~~~~ 338 (357)
T cd03795 272 VERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL---------HGVTGLVVPPGDPAALAEAIRRLLE----DPELRER 338 (357)
T ss_pred cccccccchHHHHHHHcCCCEEecCCCCchhHHhh---------CCCceEEeCCCCHHHHHHHHHHHHH----CHHHHHH
Confidence 6 49999999999999999999999999988873 1689999999999999999999987 8888888
Q ss_pred HHHHH---HHhcCCHHHHH
Q 006091 629 LMRRG---MEKDYTWENAA 644 (662)
Q Consensus 629 l~~~~---~~~~fs~e~~a 644 (662)
|++++ +.++|||+.++
T Consensus 339 ~~~~~~~~~~~~~s~~~~~ 357 (357)
T cd03795 339 LGEAARERAEEEFTADRMV 357 (357)
T ss_pred HHHHHHHHHHHhcchHhhC
Confidence 88887 46899999874
No 47
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=100.00 E-value=1.7e-31 Score=285.54 Aligned_cols=382 Identities=19% Similarity=0.200 Sum_probs=258.3
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEe
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 232 (662)
||++|+..++|. .||.+.++..++++|+++||+|+++++........ ... ......
T Consensus 1 kIl~i~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~--~~~--------------------~~~~~~ 56 (394)
T cd03794 1 KILILSQYFPPE--LGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGK--IYK--------------------GYKREE 56 (394)
T ss_pred CEEEEecccCCc--cCCcceeHHHHHHHHHhCCceEEEEecCCCccccc--ccc--------------------cceEEe
Confidence 799999988775 49999999999999999999999998764221110 000 011234
Q ss_pred eCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCC-cchHHHHHHhh
Q 006091 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWH-AGLVPVLLASK 311 (662)
Q Consensus 233 ~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~-~~l~~~ll~~~ 311 (662)
.++++++.+......... +......+..+.......... ...+||+||+|.+. ....+.....+
T Consensus 57 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~------~~~~~D~v~~~~~~~~~~~~~~~~~~ 121 (394)
T cd03794 57 VDGVRVHRVPLPPYKKNG---------LLKRLLNYLSFALSALLALLK------RRRRPDVIIATSPPLLIALAALLLAR 121 (394)
T ss_pred cCCeEEEEEecCCCCccc---------hHHHHHhhhHHHHHHHHHHHh------cccCCCEEEEcCChHHHHHHHHHHHH
Confidence 467777777644322110 111122222232222222110 12379999999732 22233333332
Q ss_pred cCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCc
Q 006091 312 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 391 (662)
Q Consensus 312 ~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~ 391 (662)
. .++|+++++|+... .............. .......+++..+..+|.++++|+
T Consensus 122 ~------~~~~~i~~~h~~~~-----~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~d~vi~~s~ 174 (394)
T cd03794 122 L------KGAPFVLEVRDLWP-----ESAVALGLLKNGSL----------------LYRLLRKLERLIYRRADAIVVISP 174 (394)
T ss_pred h------cCCCEEEEehhhcc-----hhHHHccCccccch----------------HHHHHHHHHHHHHhcCCEEEEECH
Confidence 2 48999999998621 11111000000000 001223456778889999999999
Q ss_pred chhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEE
Q 006091 392 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 471 (662)
Q Consensus 392 ~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~I 471 (662)
...+.+.. ......++.++|||+|...+.+.... .. +.++... .+.++|
T Consensus 175 ~~~~~~~~----------~~~~~~~~~~i~~~~~~~~~~~~~~~------------------~~-~~~~~~~--~~~~~i 223 (394)
T cd03794 175 GMREYLVR----------RGVPPEKISVIPNGVDLELFKPPPAD------------------ES-LRKELGL--DDKFVV 223 (394)
T ss_pred HHHHHHHh----------cCCCcCceEEcCCCCCHHHcCCccch------------------hh-hhhccCC--CCcEEE
Confidence 98887641 23456789999999998766554321 01 2333333 467899
Q ss_pred EEEecCCCccCHHHHHHHHHhccCC-CeEEEEEeCCChhhHHHHHHHHhhc--CCcEEEEcCCChHHHHHHHHhcCEEEE
Q 006091 472 GFIGRLDYQKGIDLIRLAAPEILAD-DIQFVMLGSGDPQFESWMRDTEATY--KDKYRGWVGFNVPISHRITAGCDILLM 548 (662)
Q Consensus 472 l~vGrl~~~Kg~d~Ll~A~~~l~~~-d~~lvivG~g~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~ll~~aDi~v~ 548 (662)
+++|++.+.||++.+++++..+.+. +++|+++|+|+ ......+.+.... ++.+.++ .+.+++..+|+.||++++
T Consensus 224 ~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i~G~~~-~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~~~~di~i~ 300 (394)
T cd03794 224 LYAGNIGRAQGLDTLLEAAALLKDRPDIRFLIVGDGP-EKEELKELAKALGLDNVTFLGR--VPKEELPELLAAADVGLV 300 (394)
T ss_pred EEecCcccccCHHHHHHHHHHHhhcCCeEEEEeCCcc-cHHHHHHHHHHcCCCcEEEeCC--CChHHHHHHHHhhCeeEE
Confidence 9999999999999999999999765 89999999985 2333333222222 2333332 255667799999999999
Q ss_pred cCCCCCC-----cHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCH
Q 006091 549 PSRFEPC-----GLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHK 623 (662)
Q Consensus 549 PS~~E~f-----gl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~ 623 (662)
|+..|++ |++++|||++|+|||+++.++..+++.+ +++|+++++.|+++++++|.+++. |+
T Consensus 301 ~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~----------~~~g~~~~~~~~~~l~~~i~~~~~----~~ 366 (394)
T cd03794 301 PLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEE----------AGAGLVVPPGDPEALAAAILELLD----DP 366 (394)
T ss_pred eccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhcc----------CCcceEeCCCCHHHHHHHHHHHHh----Ch
Confidence 9998865 8889999999999999999999999988 789999999999999999999986 88
Q ss_pred HHHHHHHHHH---HHhcCCHHHHHHHHH
Q 006091 624 SSWEGLMRRG---MEKDYTWENAAIQYE 648 (662)
Q Consensus 624 ~~~~~l~~~~---~~~~fs~e~~a~~~~ 648 (662)
+.+.++++++ ..++|+|+.++++|+
T Consensus 367 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 367 EERAEMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHHHHHHHhhcHHHHHHhcC
Confidence 8888888877 356999999999873
No 48
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=1.5e-31 Score=292.67 Aligned_cols=227 Identities=15% Similarity=0.109 Sum_probs=169.7
Q ss_pred EEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHH--hCCC
Q 006091 386 LLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE--LGLP 463 (662)
Q Consensus 386 ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~--lgl~ 463 (662)
+++.|...++.+. +.++.+.+|+.+||||||+..|.+.... ....+.. .+++
T Consensus 342 ~v~~s~~v~~~l~---------~~lgip~~KI~VIyNGVD~~rf~p~~~~-----------------~~~~r~~~~~~l~ 395 (578)
T PRK15490 342 FMSNNHCVTRHYA---------DWLKLEAKHFQVVYNGVLPPSTEPSSEV-----------------PHKIWQQFTQKTQ 395 (578)
T ss_pred hhhccHHHHHHHH---------HHhCCCHHHEEEEeCCcchhhcCccchh-----------------hHHHHHHhhhccC
Confidence 5566666666553 3345678899999999999887764321 1122322 2333
Q ss_pred CCCCCCEEEEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH
Q 006091 464 IRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA 541 (662)
Q Consensus 464 ~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~ 541 (662)
++.++|+++||+.+.||+..+++++..+.+ ++++|+|+|+|+ ..+.+.+.+.+......+.++|+.. ++..+|+
T Consensus 396 --~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGdG~-~~eeLk~la~elgL~d~V~FlG~~~-Dv~~~La 471 (578)
T PRK15490 396 --DADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGDGD-LRAEAQKRAEQLGILERILFVGASR-DVGYWLQ 471 (578)
T ss_pred --CCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeCch-hHHHHHHHHHHcCCCCcEEECCChh-hHHHHHH
Confidence 456899999999999999999999988754 589999999995 3333333333332234455677644 4668999
Q ss_pred hcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhh
Q 006091 542 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYRE 621 (662)
Q Consensus 542 ~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~ 621 (662)
.+|++|+||.+|+||++++|||+||+|||+|+.||.+|+|.+ +.+|+++++.|++++++++..+.... +
T Consensus 472 aADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~d----------G~nG~LVp~~D~~aLa~ai~lA~aL~-~ 540 (578)
T PRK15490 472 KMNVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIE----------GVSGFILDDAQTVNLDQACRYAEKLV-N 540 (578)
T ss_pred hCCEEEEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHccc----------CCcEEEECCCChhhHHHHHHHHHHHH-H
Confidence 999999999999999999999999999999999999999998 89999999999998888874332211 1
Q ss_pred CHHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHH
Q 006091 622 HKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEW 653 (662)
Q Consensus 622 ~~~~~~~l~~~~---~~~~fs~e~~a~~~~~iy~~ 653 (662)
..+....+++++ +.++|||+.|+++|.++|..
T Consensus 541 ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 541 LWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 233334455554 57899999999999999964
No 49
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=100.00 E-value=1.9e-31 Score=284.35 Aligned_cols=364 Identities=21% Similarity=0.242 Sum_probs=243.4
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEe
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 232 (662)
||++++..++|. .||.+.++.+++++|+++||+|.|+++......... .
T Consensus 1 kil~~~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~-----------------------------~ 49 (374)
T cd03817 1 KIGIFTDTYLPQ--VNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEE-----------------------------E 49 (374)
T ss_pred CeeEeehhccCC--CCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCccc-----------------------------c
Confidence 799999998886 799999999999999999999999998754321100 0
Q ss_pred eCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcc-hHHHHHHhh
Q 006091 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAG-LVPVLLASK 311 (662)
Q Consensus 233 ~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~-l~~~ll~~~ 311 (662)
...+.........+.+ + ...+ .+......... ..+||+||+|..... .....+..+
T Consensus 50 ~~~~~~~~~~~~~~~~----~----------~~~~-~~~~~~~~~~~--------~~~~Div~~~~~~~~~~~~~~~~~~ 106 (374)
T cd03817 50 VVVVRPFRVPTFKYPD----F----------RLPL-PIPRALIIILK--------ELGPDIVHTHTPFSLGLLGLRVARK 106 (374)
T ss_pred cccccccccccchhhh----h----------hccc-cHHHHHHHHHh--------hcCCCEEEECCchhhhhHHHHHHHH
Confidence 0011111000000000 0 0000 01111111111 127999999975332 223333322
Q ss_pred cCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhh-hHHHHHHHhcCEEEecC
Q 006091 312 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAV-NVLKGAIVTADRLLTVS 390 (662)
Q Consensus 312 ~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~k~~~~~ad~ii~vS 390 (662)
.++|+++++|+... ............. ..... .+++..+..+|.++++|
T Consensus 107 -------~~~~~i~~~~~~~~------~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~d~i~~~s 156 (374)
T cd03817 107 -------LGIPVVATYHTMYE------DYTHYVPLGRLLA-----------------RAVVRRKLSRRFYNRCDAVIAPS 156 (374)
T ss_pred -------cCCCEEEEecCCHH------HHHHHHhcccchh-----------------HHHHHHHHHHHHhhhCCEEEecc
Confidence 58999999997521 0000000000000 00111 46677888999999999
Q ss_pred cchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCE
Q 006091 391 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 470 (662)
Q Consensus 391 ~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~ 470 (662)
+..++.+.. +. ...++.++|||+|...+.+... ...++++++. .+.++
T Consensus 157 ~~~~~~~~~----------~~-~~~~~~vi~~~~~~~~~~~~~~-------------------~~~~~~~~~~--~~~~~ 204 (374)
T cd03817 157 EKIADLLRE----------YG-VKRPIEVIPTGIDLDRFEPVDG-------------------DDERRKLGIP--EDEPV 204 (374)
T ss_pred HHHHHHHHh----------cC-CCCceEEcCCccchhccCccch-------------------hHHHHhcCCC--CCCeE
Confidence 987776642 11 2345899999999887765432 1225555655 56789
Q ss_pred EEEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhh---cCCcEEEEcCCChHHHHHHHHhcCE
Q 006091 471 IGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT---YKDKYRGWVGFNVPISHRITAGCDI 545 (662)
Q Consensus 471 Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~ll~~aDi 545 (662)
|+++|++.+.||++.++++++.+.+ ++++|+++|+|+ ..+...+.+... .++.+.+++ +.+++..+|+.||+
T Consensus 205 i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~-~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~~ad~ 281 (374)
T cd03817 205 LLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGP-EREELEELARELGLADRVIFTGFV--PREELPDYYKAADL 281 (374)
T ss_pred EEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCc-hHHHHHHHHHHcCCCCcEEEeccC--ChHHHHHHHHHcCE
Confidence 9999999999999999999999876 589999999985 222222222221 123343443 45667899999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHH
Q 006091 546 LLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSS 625 (662)
Q Consensus 546 ~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~ 625 (662)
+++||..|++|++++|||+||+|||+++.|+..|++.+ +.+|+++++.+. +++++|.++++ +++.
T Consensus 282 ~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~----------~~~g~~~~~~~~-~~~~~i~~l~~----~~~~ 346 (374)
T cd03817 282 FVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVAD----------GENGFLFPPGDE-ALAEALLRLLQ----DPEL 346 (374)
T ss_pred EEecccccCcChHHHHHHHcCCcEEEeCCCChhhheec----------CceeEEeCCCCH-HHHHHHHHHHh----ChHH
Confidence 99999999999999999999999999999999999998 899999998887 89999998887 7888
Q ss_pred HHHHHHHHH--HhcCCHHHHHHHHHHHHHH
Q 006091 626 WEGLMRRGM--EKDYTWENAAIQYEQVFEW 653 (662)
Q Consensus 626 ~~~l~~~~~--~~~fs~e~~a~~~~~iy~~ 653 (662)
++++++++. .++++ .++++.++|++
T Consensus 347 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 373 (374)
T cd03817 347 RRRLSKNAEESAEKFS---FAKKVEKLYEE 373 (374)
T ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHhc
Confidence 888888773 33444 66677777764
No 50
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=100.00 E-value=5.1e-31 Score=281.48 Aligned_cols=342 Identities=16% Similarity=0.138 Sum_probs=240.7
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEe
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 232 (662)
|||+++..++| |.++++.+++.+|.++||+|+|++...+......... ..
T Consensus 1 ki~~~~~~~~~-----~~~~~~~~~~~~L~~~g~~v~v~~~~~~~~~~~~~~~------------------------~~- 50 (355)
T cd03799 1 KIAYLVKEFPR-----LSETFILREILALEAAGHEVEIFSLRPPEDTLVHPED------------------------RA- 50 (355)
T ss_pred CEEEECCCCCC-----cchHHHHHHHHHHHhCCCeEEEEEecCcccccccccc------------------------cc-
Confidence 79999987644 3789999999999999999999997743211100000 00
Q ss_pred eCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHhhc
Q 006091 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 312 (662)
Q Consensus 233 ~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~~ 312 (662)
....+ . | ......+..+...+...+. ..+||+||+|..........+..+.
T Consensus 51 -~~~~~------~-------~-------~~~~~~~~~~~~~~~~~~~--------~~~~Dii~~~~~~~~~~~~~~~~~~ 101 (355)
T cd03799 51 -ELART------R-------Y-------LARSLALLAQALVLARELR--------RLGIDHIHAHFGTTPATVAMLASRL 101 (355)
T ss_pred -cccch------H-------H-------HHHHHHHHHHHHHHHHHHH--------hcCCCEEEECCCCchHHHHHHHHHh
Confidence 00000 0 0 0001111111122222211 1268999999875555455555443
Q ss_pred CCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCcc
Q 006091 313 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 392 (662)
Q Consensus 313 ~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~~ 392 (662)
.++|+++++|+....... ...+++..++.+|.++++|+.
T Consensus 102 ------~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~vi~~s~~ 140 (355)
T cd03799 102 ------GGIPYSFTAHGKDIFRSP-----------------------------------DAIDLDEKLARADFVVAISEY 140 (355)
T ss_pred ------cCCCEEEEEecccccccC-----------------------------------chHHHHHHHhhCCEEEECCHH
Confidence 479999999964211000 002456677899999999999
Q ss_pred hhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEEE
Q 006091 393 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 472 (662)
Q Consensus 393 ~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il 472 (662)
.++.+.+ .++....++.+||||+|...+.+.... .. .+.+.|+
T Consensus 141 ~~~~l~~---------~~~~~~~~~~vi~~~~d~~~~~~~~~~--------------------------~~--~~~~~i~ 183 (355)
T cd03799 141 NRQQLIR---------LLGCDPDKIHVVHCGVDLERFPPRPPP--------------------------PP--GEPLRIL 183 (355)
T ss_pred HHHHHHH---------hcCCCcccEEEEeCCcCHHHcCCcccc--------------------------cc--CCCeEEE
Confidence 9988753 224556789999999998776543200 01 3567899
Q ss_pred EEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCC-ChHHHHHHHHhcCEEEEc
Q 006091 473 FIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGCDILLMP 549 (662)
Q Consensus 473 ~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~ll~~aDi~v~P 549 (662)
|+|++.+.||++.+++++..+.+ ++++|+++|.++. .....+.+........+.+.|+ +.+++..+|+.||++++|
T Consensus 184 ~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~-~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~l~~ 262 (355)
T cd03799 184 SVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPL-RDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVLP 262 (355)
T ss_pred EEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCcc-HHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEEEec
Confidence 99999999999999999999876 4899999999863 2333333332211222334443 456678999999999999
Q ss_pred CCC------CCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCH
Q 006091 550 SRF------EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHK 623 (662)
Q Consensus 550 S~~------E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~ 623 (662)
|.+ |++|++++|||++|+|+|+++.|+..+++.+ +.+|+++++.|+++++++|.++++ ++
T Consensus 263 s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~----------~~~g~~~~~~~~~~l~~~i~~~~~----~~ 328 (355)
T cd03799 263 SVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVED----------GETGLLVPPGDPEALADAIERLLD----DP 328 (355)
T ss_pred ceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhC----------CCceEEeCCCCHHHHHHHHHHHHh----CH
Confidence 998 9999999999999999999999999999998 779999999999999999999987 78
Q ss_pred HHHHHHHHHH---HHhcCCHHHHHHH
Q 006091 624 SSWEGLMRRG---MEKDYTWENAAIQ 646 (662)
Q Consensus 624 ~~~~~l~~~~---~~~~fs~e~~a~~ 646 (662)
+.+.++++++ +.++|+|+.++++
T Consensus 329 ~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 329 ELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 8888888877 4688999999875
No 51
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=100.00 E-value=1.1e-30 Score=278.86 Aligned_cols=351 Identities=20% Similarity=0.251 Sum_probs=235.5
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEe
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 232 (662)
||+||+.. +|. .||+++++.+|+++|++.||+|.+++......... . . ..
T Consensus 1 kI~~v~~~-~~~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~--~-~-----------------------~~- 50 (366)
T cd03822 1 RIALVSPY-PPR--KCGIATFTTDLVNALSARGPDVLVVSVAALYPSLL--Y-G-----------------------GE- 50 (366)
T ss_pred CeEEecCC-CCC--CCcHHHHHHHHHHHhhhcCCeEEEEEeecccCccc--C-C-----------------------Cc-
Confidence 79999874 453 69999999999999999999999998663221100 0 0 00
Q ss_pred eCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHH---HHHH
Q 006091 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVP---VLLA 309 (662)
Q Consensus 233 ~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~---~ll~ 309 (662)
...... ... + +...+..+...+ . ..+||+||+|.+...+.+ ..+.
T Consensus 51 ~~~~~~--~~~---------~---------~~~~~~~~~~~~----~--------~~~~dii~~~~~~~~~~~~~~~~~~ 98 (366)
T cd03822 51 QEVVRV--IVL---------D---------NPLDYRRAARAI----R--------LSGPDVVVIQHEYGIFGGEAGLYLL 98 (366)
T ss_pred ccceee--eec---------C---------CchhHHHHHHHH----h--------hcCCCEEEEeeccccccchhhHHHH
Confidence 000000 000 0 011111111111 1 126899999875432211 1111
Q ss_pred hhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEec
Q 006091 310 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 389 (662)
Q Consensus 310 ~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~v 389 (662)
.... ..++|+|+++|+..... . . .....+++..++.+|.++++
T Consensus 99 ~~~~----~~~~~~i~~~h~~~~~~------------~-~--------------------~~~~~~~~~~~~~~d~ii~~ 141 (366)
T cd03822 99 LLLR----GLGIPVVVTLHTVLLHE------------P-R--------------------PGDRALLRLLLRRADAVIVM 141 (366)
T ss_pred HHHh----hcCCCEEEEEecCCccc------------c-c--------------------hhhhHHHHHHHhcCCEEEEe
Confidence 1100 15899999999851000 0 0 01123456677899999999
Q ss_pred CcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCC
Q 006091 390 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP 469 (662)
Q Consensus 390 S~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~ 469 (662)
|....+.+.. .....++.+||||+|...+.+... . ++...+ .+.+
T Consensus 142 s~~~~~~~~~-----------~~~~~~~~~i~~~~~~~~~~~~~~---------------------~-~~~~~~--~~~~ 186 (366)
T cd03822 142 SSELLRALLL-----------RAYPEKIAVIPHGVPDPPAEPPES---------------------L-KALGGL--DGRP 186 (366)
T ss_pred eHHHHHHHHh-----------hcCCCcEEEeCCCCcCcccCCchh---------------------h-HhhcCC--CCCe
Confidence 7333222210 111468999999999766543211 0 222223 4678
Q ss_pred EEEEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHH----HHhh-cCCcEEEEcC-CChHHHHHHHH
Q 006091 470 LIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRD----TEAT-YKDKYRGWVG-FNVPISHRITA 541 (662)
Q Consensus 470 ~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~----l~~~-~~~~~~~~~~-~~~~~~~~ll~ 541 (662)
+|+|+|++.+.||++.+++|+..+.+ ++++|+++|++.+........ +... ...++....+ .+.+++..+|+
T Consensus 187 ~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~~ 266 (366)
T cd03822 187 VLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELFS 266 (366)
T ss_pred EEEEEeeccCCCCHHHHHHHHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHHHh
Confidence 99999999999999999999999876 489999999986433322211 2222 2233433333 34566779999
Q ss_pred hcCEEEEcCCCC--CCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHh
Q 006091 542 GCDILLMPSRFE--PCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTY 619 (662)
Q Consensus 542 ~aDi~v~PS~~E--~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~ 619 (662)
.||++++||.+| ++|++++|||+||+|||+++.|+ .+.+.+ +.+|+++++.|+++++++|..+++
T Consensus 267 ~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~----------~~~g~~~~~~d~~~~~~~l~~l~~-- 333 (366)
T cd03822 267 AADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLD----------GGTGLLVPPGDPAALAEAIRRLLA-- 333 (366)
T ss_pred hcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeee----------CCCcEEEcCCCHHHHHHHHHHHHc--
Confidence 999999999999 99999999999999999999999 676766 689999999999999999999987
Q ss_pred hhCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHH
Q 006091 620 REHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFE 652 (662)
Q Consensus 620 ~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy~ 652 (662)
+++.+.++++++ ..++|+|+.++++|.++|+
T Consensus 334 --~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 366 (366)
T cd03822 334 --DPELAQALRARAREYARAMSWERVAERYLRLLA 366 (366)
T ss_pred --ChHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhC
Confidence 788888888877 3455999999999999874
No 52
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=100.00 E-value=1.3e-30 Score=275.42 Aligned_cols=353 Identities=20% Similarity=0.196 Sum_probs=247.7
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEe
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 232 (662)
||++++.. .||..+++..++++|.+.||+|+++++...... ...
T Consensus 1 kIl~i~~~------~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~------------------------------~~~ 44 (359)
T cd03808 1 KILHIVTV------DGGLYSFRLPLIKALRAAGYEVHVVAPPGDELE------------------------------ELE 44 (359)
T ss_pred CeeEEEec------chhHHHHHHHHHHHHHhcCCeeEEEecCCCccc------------------------------ccc
Confidence 68999875 489999999999999999999999987632210 011
Q ss_pred eCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHhhc
Q 006091 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 312 (662)
Q Consensus 233 ~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~~ 312 (662)
..++.++.++.... ....+ .....+..+ .+.+.. .+||+||+|.....++..+.....
T Consensus 45 ~~~~~~~~~~~~~~--~~~~~--------~~~~~~~~~----~~~~~~--------~~~dvv~~~~~~~~~~~~~~~~~~ 102 (359)
T cd03808 45 ALGVKVIPIPLDRR--GINPF--------KDLKALLRL----YRLLRK--------ERPDIVHTHTPKPGILGRLAARLA 102 (359)
T ss_pred cCCceEEecccccc--ccChH--------hHHHHHHHH----HHHHHh--------cCCCEEEEccccchhHHHHHHHHc
Confidence 24566655543210 00000 111111111 222211 279999999877766666655433
Q ss_pred CCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCcc
Q 006091 313 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 392 (662)
Q Consensus 313 ~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~~ 392 (662)
...+++++.|+..+..... ... ......+.+..+..+|.++++|+.
T Consensus 103 ------~~~~~i~~~~~~~~~~~~~-----------~~~-----------------~~~~~~~~~~~~~~~d~ii~~s~~ 148 (359)
T cd03808 103 ------GVPKVIYTVHGLGFVFTSG-----------GLK-----------------RRLYLLLERLALRFTDKVIFQNED 148 (359)
T ss_pred ------CCCCEEEEecCcchhhccc-----------hhH-----------------HHHHHHHHHHHHhhccEEEEcCHH
Confidence 4678888888753211100 000 011233556777889999999999
Q ss_pred hhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEEE
Q 006091 393 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 472 (662)
Q Consensus 393 ~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il 472 (662)
..+.+.... ......++.+++||+|...+.+.... .+ .+.++|+
T Consensus 149 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~--~~~~~i~ 192 (359)
T cd03808 149 DRDLALKLG--------IIKKKKTVLIPGSGVDLDRFSPSPEP--------------------------IP--EDDPVFL 192 (359)
T ss_pred HHHHHHHhc--------CCCcCceEEecCCCCChhhcCccccc--------------------------cC--CCCcEEE
Confidence 888775311 11124578888999998776544310 01 4678999
Q ss_pred EEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEEEcC
Q 006091 473 FIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPS 550 (662)
Q Consensus 473 ~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~PS 550 (662)
|+|++.+.||++.+++++..+.+ ++++|+|+|.++.........+........+.+.++ .+++..+|+.||++++||
T Consensus 193 ~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~-~~~~~~~~~~adi~i~ps 271 (359)
T cd03808 193 FVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGF-RDDVPELLAAADVFVLPS 271 (359)
T ss_pred EEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeec-cccHHHHHHhccEEEecC
Confidence 99999999999999999999874 589999999986432222111222222333445555 344668999999999999
Q ss_pred CCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHH
Q 006091 551 RFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLM 630 (662)
Q Consensus 551 ~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~ 630 (662)
..|++|++++|||+||+|||+++.++..|++.+ +++|+++++.|+++++++|.+++. +++.+.+++
T Consensus 272 ~~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~----------~~~g~~~~~~~~~~~~~~i~~l~~----~~~~~~~~~ 337 (359)
T cd03808 272 YREGLPRVLLEAMAMGRPVIATDVPGCREAVID----------GVNGFLVPPGDAEALADAIERLIE----DPELRARMG 337 (359)
T ss_pred cccCcchHHHHHHHcCCCEEEecCCCchhhhhc----------CcceEEECCCCHHHHHHHHHHHHh----CHHHHHHHH
Confidence 999999999999999999999999999999988 789999999999999999999876 788888888
Q ss_pred HHH---HHhcCCHHHHHHHHH
Q 006091 631 RRG---MEKDYTWENAAIQYE 648 (662)
Q Consensus 631 ~~~---~~~~fs~e~~a~~~~ 648 (662)
+++ +.++|+|+.++++|+
T Consensus 338 ~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 338 QAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHHHHhcCHHHHHHHhh
Confidence 877 478999999999886
No 53
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=100.00 E-value=1.7e-30 Score=274.59 Aligned_cols=366 Identities=26% Similarity=0.332 Sum_probs=254.2
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEe
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 232 (662)
||++++..++|. .||...++..++++|.+.||+|.++++........ ..
T Consensus 1 kI~ii~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~-----------------------------~~ 49 (374)
T cd03801 1 KILLVTPEYPPS--VGGAERHVLELARALAARGHEVTVLTPGDGGLPDE-----------------------------EE 49 (374)
T ss_pred CeeEEecccCCc--cCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCce-----------------------------ee
Confidence 799999988775 69999999999999999999999999774332110 00
Q ss_pred eCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHhhc
Q 006091 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 312 (662)
Q Consensus 233 ~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~~ 312 (662)
......... .... . .. .................. .+||+||+|.+........+.. .
T Consensus 50 ~~~~~~~~~--~~~~-~--~~---------~~~~~~~~~~~~~~~~~~--------~~~Dii~~~~~~~~~~~~~~~~-~ 106 (374)
T cd03801 50 VGGIVVVRP--PPLL-R--VR---------RLLLLLLLALRLRRLLRR--------ERFDVVHAHDWLALLAAALAAR-L 106 (374)
T ss_pred ecCcceecC--Cccc-c--cc---------hhHHHHHHHHHHHHHhhh--------cCCcEEEEechhHHHHHHHHHH-h
Confidence 000000000 0000 0 00 011111111112222211 2699999998777655543332 2
Q ss_pred CCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCcc
Q 006091 313 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 392 (662)
Q Consensus 313 ~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~~ 392 (662)
.++|+++++|+......... ... .......+.+..+..+|.++++|+.
T Consensus 107 ------~~~~~i~~~h~~~~~~~~~~---------~~~-----------------~~~~~~~~~~~~~~~~d~~i~~s~~ 154 (374)
T cd03801 107 ------LGIPLVLTVHGLEFGRPGNE---------LGL-----------------LLKLARALERRALRRADRIIAVSEA 154 (374)
T ss_pred ------cCCcEEEEeccchhhccccc---------hhH-----------------HHHHHHHHHHHHHHhCCEEEEecHH
Confidence 58999999998642211100 000 0012234567778899999999999
Q ss_pred hhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEEE
Q 006091 393 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 472 (662)
Q Consensus 393 ~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il 472 (662)
..+.+.. .+.....++.++|||+|...+.+.. ...+...... .+.++|+
T Consensus 155 ~~~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~~~--------------------~~~~~~~~~~--~~~~~i~ 203 (374)
T cd03801 155 TREELRE---------LGGVPPEKITVIPNGVDTERFRPAP--------------------RAARRRLGIP--EDEPVIL 203 (374)
T ss_pred HHHHHHh---------cCCCCCCcEEEecCcccccccCccc--------------------hHHHhhcCCc--CCCeEEE
Confidence 8887753 2233346899999999988765432 1112222222 4668999
Q ss_pred EEecCCCccCHHHHHHHHHhccCC--CeEEEEEeCCChhhHHHHHHHHh---hcCCcEEEEcCCChHHHHHHHHhcCEEE
Q 006091 473 FIGRLDYQKGIDLIRLAAPEILAD--DIQFVMLGSGDPQFESWMRDTEA---TYKDKYRGWVGFNVPISHRITAGCDILL 547 (662)
Q Consensus 473 ~vGrl~~~Kg~d~Ll~A~~~l~~~--d~~lvivG~g~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~ll~~aDi~v 547 (662)
|+|++.+.||++.+++++..+... +++|+++|+++ ......+.+.. ..++.+.+++ +.+++..+|+.||+++
T Consensus 204 ~~g~~~~~k~~~~~i~~~~~~~~~~~~~~l~i~G~~~-~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~~~di~i 280 (374)
T cd03801 204 FVGRLVPRKGVDLLLEALAKLRKEYPDVRLVIVGDGP-LREELEALAAELGLGDRVTFLGFV--PDEDLPALYAAADVFV 280 (374)
T ss_pred EecchhhhcCHHHHHHHHHHHhhhcCCeEEEEEeCcH-HHHHHHHHHHHhCCCcceEEEecc--ChhhHHHHHHhcCEEE
Confidence 999999999999999999998763 89999999774 22222222212 2233445555 4456778999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHH
Q 006091 548 MPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWE 627 (662)
Q Consensus 548 ~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~ 627 (662)
+|+..|++|++++|||++|+|||+++.+++.+++.+ +.+|+++++.|+++++++|.+++. +++.+.
T Consensus 281 ~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~----------~~~g~~~~~~~~~~l~~~i~~~~~----~~~~~~ 346 (374)
T cd03801 281 LPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVED----------GETGLLVPPGDPEALAEAILRLLD----DPELRR 346 (374)
T ss_pred ecchhccccchHHHHHHcCCcEEEeCCCChhHHhcC----------CcceEEeCCCCHHHHHHHHHHHHc----ChHHHH
Confidence 999999999999999999999999999999999997 789999999999999999999987 788888
Q ss_pred HHHHHH---HHhcCCHHHHHHHHHHHHH
Q 006091 628 GLMRRG---MEKDYTWENAAIQYEQVFE 652 (662)
Q Consensus 628 ~l~~~~---~~~~fs~e~~a~~~~~iy~ 652 (662)
++++++ ..++|+|+++++++.++|+
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (374)
T cd03801 347 RLGEAARERVAERFSWDRVAARTEEVYY 374 (374)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHhhC
Confidence 888876 4789999999999999874
No 54
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=100.00 E-value=1.8e-30 Score=273.15 Aligned_cols=341 Identities=19% Similarity=0.141 Sum_probs=236.6
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEe
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 232 (662)
||++++..+.| .||.++++..++++|++.||+|+|++..... . .. ...
T Consensus 1 kI~i~~~~~~~---~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~-~---~~-------------------------~~~ 48 (348)
T cd03820 1 KILFVIPSLGN---AGGAERVLSNLANALAEKGHEVTIISLDKGE-P---PF-------------------------YEL 48 (348)
T ss_pred CeEEEeccccC---CCChHHHHHHHHHHHHhCCCeEEEEecCCCC-C---Cc-------------------------ccc
Confidence 69999988766 5999999999999999999999999876432 0 00 011
Q ss_pred eCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHhhc
Q 006091 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 312 (662)
Q Consensus 233 ~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~~ 312 (662)
.+++.+..++...... .. ........+.+.+. ..+||+||+|.+. . ..++....
T Consensus 49 ~~~~~~~~~~~~~~~~---~~------------~~~~~~~~~~~~l~--------~~~~d~i~~~~~~--~-~~~~~~~~ 102 (348)
T cd03820 49 DPKIKVIDLGDKRDSK---LL------------ARFKKLRRLRKLLK--------NNKPDVVISFLTS--L-LTFLASLG 102 (348)
T ss_pred CCccceeecccccccc---hh------------ccccchHHHHHhhc--------ccCCCEEEEcCch--H-HHHHHHHh
Confidence 1233333333211100 00 00001111111111 1279999999866 1 22222222
Q ss_pred CCCCCCCC-CcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCc
Q 006091 313 RPHGVYKD-ARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 391 (662)
Q Consensus 313 ~~~~~~~g-ip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~ 391 (662)
.+ +|++++.|+....... . .......+..++.+|.++++|+
T Consensus 103 ------~~~~~~i~~~~~~~~~~~~-------------~-------------------~~~~~~~~~~~~~~d~ii~~s~ 144 (348)
T cd03820 103 ------LKIVKLIVSEHNSPDAYKK-------------R-------------------LRRLLLRRLLYRRADAVVVLTE 144 (348)
T ss_pred ------hccccEEEecCCCccchhh-------------h-------------------hHHHHHHHHHHhcCCEEEEeCH
Confidence 23 5999999965211000 0 0001135777889999999999
Q ss_pred chhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEE
Q 006091 392 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 471 (662)
Q Consensus 392 ~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~I 471 (662)
..+... ......++.++|||++...+.+.. + .+.+++
T Consensus 145 ~~~~~~------------~~~~~~~~~vi~~~~~~~~~~~~~-----------------------------~--~~~~~i 181 (348)
T cd03820 145 EDRALY------------YKKFNKNVVVIPNPLPFPPEEPSS-----------------------------D--LKSKRI 181 (348)
T ss_pred HHHHHh------------hccCCCCeEEecCCcChhhccccC-----------------------------C--CCCcEE
Confidence 876211 223467899999999977654320 1 356899
Q ss_pred EEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEEEc
Q 006091 472 GFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMP 549 (662)
Q Consensus 472 l~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~P 549 (662)
+++|++.+.||++.++++++.+.+ ++++|+|+|+++. .....+.+........+.+.+. .+++..+|+.||++++|
T Consensus 182 ~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~G~~~~-~~~~~~~~~~~~~~~~v~~~g~-~~~~~~~~~~ad~~i~p 259 (348)
T cd03820 182 LAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGPE-REALEALIKELGLEDRVILLGF-TKNIEEYYAKASIFVLT 259 (348)
T ss_pred EEEEeeccccCHHHHHHHHHHHHhcCCCeEEEEEeCCCC-HHHHHHHHHHcCCCCeEEEcCC-cchHHHHHHhCCEEEeC
Confidence 999999999999999999999974 5899999999852 2333332333222334455655 45567899999999999
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEeCCc-ccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHH
Q 006091 550 SRFEPCGLNQLYAMRYGTIPVVHATG-GLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEG 628 (662)
Q Consensus 550 S~~E~fgl~~lEAma~G~PvVas~~g-g~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~ 628 (662)
|.+|++|++++|||+||+|||+++.+ +..+++.+ +.+|+++++.|+++++++|.+++. +++.+++
T Consensus 260 s~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~----------~~~g~~~~~~~~~~~~~~i~~ll~----~~~~~~~ 325 (348)
T cd03820 260 SRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIED----------GVNGLLVPNGDVEALAEALLRLME----DEELRKR 325 (348)
T ss_pred ccccccCHHHHHHHHcCCCEEEecCCCchHhhhcc----------CcceEEeCCCCHHHHHHHHHHHHc----CHHHHHH
Confidence 99999999999999999999999875 45566666 569999999999999999999986 8888999
Q ss_pred HHHHH--HHhcCCHHHHHHHHH
Q 006091 629 LMRRG--MEKDYTWENAAIQYE 648 (662)
Q Consensus 629 l~~~~--~~~~fs~e~~a~~~~ 648 (662)
+++++ +.++|+|++++++|.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 326 MGANARESAERFSIENIIKQWE 347 (348)
T ss_pred HHHHHHHHHHHhCHHHHHHHhc
Confidence 88877 568899999999985
No 55
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.98 E-value=4.9e-30 Score=282.06 Aligned_cols=372 Identities=12% Similarity=0.020 Sum_probs=237.7
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEE
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFH 230 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 230 (662)
..||++++.. .+|.+..+.+++++|+++||+|+|++...+... .. .
T Consensus 3 ~~~~~~~~~~------~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~------~~----------------------~ 48 (415)
T cd03816 3 RKRVCVLVLG------DIGRSPRMQYHALSLAKHGWKVDLVGYLETPPH------DE----------------------I 48 (415)
T ss_pred ccEEEEEEec------ccCCCHHHHHHHHHHHhcCceEEEEEecCCCCC------HH----------------------H
Confidence 4678888863 255667778899999999999999987632110 00 0
Q ss_pred EeeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHH----HHHHhhhccccCCCCCCCCCccEEEeCCCCcc--hH
Q 006091 231 EYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLL----CYAACEAPLVLPLGGFTYGEKCIFLVNDWHAG--LV 304 (662)
Q Consensus 231 ~~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~----~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~--l~ 304 (662)
....|+.++.+..+... . .. ......+..+ ...+...... ..+||+||+|..... ..
T Consensus 49 ~~~~~v~~~~~~~~~~~-~---~~------~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~Dvi~~~~~~~~~~~~ 111 (415)
T cd03816 49 LSNPNITIHPLPPPPQR-L---NK------LPFLLFAPLKVLWQFFSLLWLLYK-------LRPADYILIQNPPSIPTLL 111 (415)
T ss_pred hcCCCEEEEECCCCccc-c---cc------chHHHHHHHHHHHHHHHHHHHHHh-------cCCCCEEEEeCCCCchHHH
Confidence 12356777766543200 0 00 0111111110 1111111111 226999999874332 22
Q ss_pred HHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCC-hhhhccccccccccccccccCcchhhhHHHHHHHhc
Q 006091 305 PVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLP-SEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTA 383 (662)
Q Consensus 305 ~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~a 383 (662)
..++..+. .++|+|+++|+..+. .. ..+.. ..... .....+++..++.+
T Consensus 112 ~a~~~~~~------~~~~~V~~~h~~~~~------~~-~~~~~~~~~~~-----------------~~~~~~e~~~~~~a 161 (415)
T cd03816 112 IAWLYCLL------RRTKLIIDWHNYGYT------IL-ALKLGENHPLV-----------------RLAKWYEKLFGRLA 161 (415)
T ss_pred HHHHHHHH------hCCeEEEEcCCchHH------HH-hcccCCCCHHH-----------------HHHHHHHHHHhhcC
Confidence 23332332 479999999975210 00 00100 00000 11223456667889
Q ss_pred CEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHH-----
Q 006091 384 DRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK----- 458 (662)
Q Consensus 384 d~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~----- 458 (662)
|.|+++|+.+++.+.. ++.+++++.+||||.+ ..|.|..... .+..+++
T Consensus 162 d~ii~vS~~~~~~l~~----------~~~~~~ki~vI~Ng~~-~~f~p~~~~~---------------~~~~~~~~~~~~ 215 (415)
T cd03816 162 DYNLCVTKAMKEDLQQ----------FNNWKIRATVLYDRPP-EQFRPLPLEE---------------KHELFLKLAKTF 215 (415)
T ss_pred CEeeecCHHHHHHHHh----------hhccCCCeeecCCCCH-HHceeCcHHH---------------HHHHHHhccccc
Confidence 9999999999988752 3456789999999954 4555433210 0111111
Q ss_pred --------HhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--------CCeEEEEEeCCChhhHHHHHHHHhhcC
Q 006091 459 --------ELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--------DDIQFVMLGSGDPQFESWMRDTEATYK 522 (662)
Q Consensus 459 --------~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--------~d~~lvivG~g~~~~~~~~~~l~~~~~ 522 (662)
..++.. ++..+++++||+.+.||++.|++|++.+.+ ++++|+|+|+|+ ..+.+.+.+++...
T Consensus 216 ~~~~~~~~~~~~~~-~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~-~~~~l~~~~~~~~l 293 (415)
T cd03816 216 LTRELRIGAVQLSE-ERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGP-LKEKYLERIKELKL 293 (415)
T ss_pred cccccccccceecC-CCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCc-cHHHHHHHHHHcCC
Confidence 112221 244578889999999999999999999863 479999999996 33444444443332
Q ss_pred CcEEEEcCC-ChHHHHHHHHhcCEEEEcCC---CCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceE
Q 006091 523 DKYRGWVGF-NVPISHRITAGCDILLMPSR---FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGW 598 (662)
Q Consensus 523 ~~~~~~~~~-~~~~~~~ll~~aDi~v~PS~---~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~ 598 (662)
.++..+.++ +.+++..+|+.||++++|+. .|++|++++||||||+|||+++.||..|++++ +.+|+
T Consensus 294 ~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~----------~~~G~ 363 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKH----------GENGL 363 (415)
T ss_pred CcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcC----------CCCEE
Confidence 344444443 56677899999999997543 47899999999999999999999999999998 89999
Q ss_pred EECCCCHHHHHHHHHHHHHHhhhC---HHHHHHHHHHHH-HhcCCHHHHHHHH
Q 006091 599 SFLPLSEESMLTALRFAIRTYREH---KSSWEGLMRRGM-EKDYTWENAAIQY 647 (662)
Q Consensus 599 l~~~~d~~~la~aI~~~l~~~~~~---~~~~~~l~~~~~-~~~fs~e~~a~~~ 647 (662)
+++ |+++++++|..+++ | ++++.+|++++. ...++|+...++.
T Consensus 364 lv~--d~~~la~~i~~ll~----~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~ 410 (415)
T cd03816 364 VFG--DSEELAEQLIDLLS----NFPNRGKLNSLKKGAQEESELRWDENWDRV 410 (415)
T ss_pred EEC--CHHHHHHHHHHHHh----cCCCHHHHHHHHHHHHHhhhcCHHHHHHHH
Confidence 994 89999999999987 6 888999999874 3467777665554
No 56
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.97 E-value=5.3e-29 Score=264.30 Aligned_cols=369 Identities=22% Similarity=0.270 Sum_probs=246.2
Q ss_pred EEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEee
Q 006091 154 IVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYR 233 (662)
Q Consensus 154 Il~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 233 (662)
|++++..++|. ..||.+.++..++.+|.+.||+|+|+++......... ..
T Consensus 1 iLii~~~~p~~-~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~-~~---------------------------- 50 (377)
T cd03798 1 ILVISSLYPPP-NNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLD-LL---------------------------- 50 (377)
T ss_pred CeEeccCCCCC-CCchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchh-hc----------------------------
Confidence 57888766552 3599999999999999999999999987632211000 00
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHhhcC
Q 006091 234 EGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYR 313 (662)
Q Consensus 234 ~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~~~ 313 (662)
................ ... .........+...+...+.. ...+||+||+|.............+.
T Consensus 51 ~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~l~~------~~~~~dii~~~~~~~~~~~~~~~~~~- 115 (377)
T cd03798 51 KGRLVGVERLPVLLPV-VPL-------LKGPLLYLLAARALLKLLKL------KRFRPDLIHAHFAYPDGFAAALLKRK- 115 (377)
T ss_pred ccccccccccccCcch-hhc-------cccchhHHHHHHHHHHHHhc------ccCCCCEEEEeccchHHHHHHHHHHh-
Confidence 0000000000000000 000 00011112222223333220 02279999999644433222222222
Q ss_pred CCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCcch
Q 006091 314 PHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGY 393 (662)
Q Consensus 314 ~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~~~ 393 (662)
.++|+++++|+......... .....+++..+..+|.++++|+..
T Consensus 116 -----~~~~~i~~~h~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~d~ii~~s~~~ 159 (377)
T cd03798 116 -----LGIPLVVTLHGSDVNLLPRK-------------------------------RLLRALLRRALRRADAVIAVSEAL 159 (377)
T ss_pred -----cCCCEEEEeecchhcccCch-------------------------------hhHHHHHHHHHhcCCeEEeCCHHH
Confidence 47899999997632111000 012345677788999999999998
Q ss_pred hhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEEEE
Q 006091 394 SWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGF 473 (662)
Q Consensus 394 ~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il~ 473 (662)
.+.+.+ .. ....++.+++||+|...+.+.... + . .+++.. .+.++|++
T Consensus 160 ~~~~~~---------~~-~~~~~~~~i~~~~~~~~~~~~~~~-----------------~-~--~~~~~~--~~~~~i~~ 207 (377)
T cd03798 160 ADELKA---------LG-IDPEKVTVIPNGVDTERFSPADRA-----------------E-A--RKLGLP--EDKKVILF 207 (377)
T ss_pred HHHHHH---------hc-CCCCceEEcCCCcCcccCCCcchH-----------------H-H--HhccCC--CCceEEEE
Confidence 887752 11 356789999999998887654421 0 1 223333 46789999
Q ss_pred EecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhc---CCcEEEEcCCChHHHHHHHHhcCEEEE
Q 006091 474 IGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATY---KDKYRGWVGFNVPISHRITAGCDILLM 548 (662)
Q Consensus 474 vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~ll~~aDi~v~ 548 (662)
+|++.+.||++.++++++.+.+ ++++|+++|.++. .......+.... ++.+.+++ +.+++..+|+.||++++
T Consensus 208 ~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~-~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~~ad~~i~ 284 (377)
T cd03798 208 VGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPL-REALEALAAELGLEDRVTFLGAV--PHEEVPAYYAAADVFVL 284 (377)
T ss_pred eccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcc-hHHHHHHHHhcCCcceEEEeCCC--CHHHHHHHHHhcCeeec
Confidence 9999999999999999999876 4899999999852 222222222211 22333333 55667799999999999
Q ss_pred cCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHH
Q 006091 549 PSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEG 628 (662)
Q Consensus 549 PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~ 628 (662)
||..|++|++++|||++|+|+|+++.++..+++.+ +.+|+++++.|+++++++|.++++ ++.. +
T Consensus 285 ~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~----------~~~g~~~~~~~~~~l~~~i~~~~~----~~~~--~ 348 (377)
T cd03798 285 PSLREGFGLVLLEAMACGLPVVATDVGGIPEIITD----------GENGLLVPPGDPEALAEAILRLLA----DPWL--R 348 (377)
T ss_pred chhhccCChHHHHHHhcCCCEEEecCCChHHHhcC----------CcceeEECCCCHHHHHHHHHHHhc----CcHH--H
Confidence 99999999999999999999999999999999998 788999999999999999999987 4443 3
Q ss_pred HHHHH---HHhcCCHHHHHHHHHHHHHHh
Q 006091 629 LMRRG---MEKDYTWENAAIQYEQVFEWA 654 (662)
Q Consensus 629 l~~~~---~~~~fs~e~~a~~~~~iy~~~ 654 (662)
++.++ +.++|+|+.+++++.++|+++
T Consensus 349 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 349 LGRAARRRVAERFSWENVAERLLELYREV 377 (377)
T ss_pred HhHHHHHHHHHHhhHHHHHHHHHHHHhhC
Confidence 33333 578999999999999999763
No 57
>PLN02949 transferase, transferring glycosyl groups
Probab=99.97 E-value=2.8e-29 Score=277.62 Aligned_cols=232 Identities=14% Similarity=0.089 Sum_probs=173.8
Q ss_pred HHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHH
Q 006091 375 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKI 454 (662)
Q Consensus 375 ~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~ 454 (662)
++......+|.|++.|++.++.+.. .+.. ..++.+++||+|...+......
T Consensus 213 l~~~~~~~ad~ii~nS~~t~~~l~~---------~~~~-~~~i~vvyp~vd~~~~~~~~~~------------------- 263 (463)
T PLN02949 213 MYGLVGRCAHLAMVNSSWTKSHIEA---------LWRI-PERIKRVYPPCDTSGLQALPLE------------------- 263 (463)
T ss_pred HHHHHcCCCCEEEECCHHHHHHHHH---------HcCC-CCCeEEEcCCCCHHHcccCCcc-------------------
Confidence 4455567899999999998887742 2222 3578999999997655321100
Q ss_pred HHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC------CCeEEEEEeCCCh----hhHHHHHHHHhhc--C
Q 006091 455 ALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA------DDIQFVMLGSGDP----QFESWMRDTEATY--K 522 (662)
Q Consensus 455 ~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~------~d~~lvivG~g~~----~~~~~~~~l~~~~--~ 522 (662)
...+.+.++++||+.++||++.+++|++.+.+ ++++|+|+|++.. .+.+.++++.... .
T Consensus 264 ---------~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~ 334 (463)
T PLN02949 264 ---------RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLD 334 (463)
T ss_pred ---------ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCC
Confidence 01345789999999999999999999998643 4799999999731 2222333333322 2
Q ss_pred CcEEEEcCC-ChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccc-cccccccccccCCCCccceEEE
Q 006091 523 DKYRGWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLR-DTVENFNPFAREGSGEGTGWSF 600 (662)
Q Consensus 523 ~~~~~~~~~-~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~-eii~~~~~~~~~~~~~~~G~l~ 600 (662)
.++. +++. +.+++..+|+.||++++||..|+||++++||||+|+|||+++.||.. |++.+. .++.+|+++
T Consensus 335 ~~V~-f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~-------~~g~tG~l~ 406 (463)
T PLN02949 335 GDVE-FHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDE-------DGQQTGFLA 406 (463)
T ss_pred CcEE-EeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecC-------CCCcccccC
Confidence 2333 3333 55667789999999999999999999999999999999999999975 777641 125689997
Q ss_pred CCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHhhhC
Q 006091 601 LPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWASID 657 (662)
Q Consensus 601 ~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy~~~~~~ 657 (662)
+ |+++++++|.++++ .+++.+++|++++ ..++|||+++++++.++|+.+++.
T Consensus 407 ~--~~~~la~ai~~ll~---~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~~~ 460 (463)
T PLN02949 407 T--TVEEYADAILEVLR---MRETERLEIAAAARKRANRFSEQRFNEDFKDAIRPILNS 460 (463)
T ss_pred C--CHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhh
Confidence 4 89999999999987 2567777888777 346799999999999999988764
No 58
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.97 E-value=4e-29 Score=274.89 Aligned_cols=384 Identities=17% Similarity=0.051 Sum_probs=231.1
Q ss_pred cCccccC-cHHHHHhhHHHHHHhC--CCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEeeCCceE
Q 006091 162 APYSKTG-GLGDVCGSLPVALAAR--GHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDW 238 (662)
Q Consensus 162 ~P~~~~G-G~~~~~~~La~~L~~~--GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~gv~v 238 (662)
.|+...| |.+++..+.+.+|.++ ||+|+|+|..+.... +.......+. |..+..+++++
T Consensus 7 hp~~~~ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~--~~~l~~~~~~----------------f~~~~~~~~~~ 68 (419)
T cd03806 7 HPYCNAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATP--EEILEKVESR----------------FNIELDRPRIV 68 (419)
T ss_pred CCCCCCCCCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCH--HHHHHHHHHh----------------cCeecCCCceE
Confidence 4665566 9999999999999999 899999998865422 0111111101 11233456776
Q ss_pred EEEe-CCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHhhcCCCCC
Q 006091 239 VFVD-HPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGV 317 (662)
Q Consensus 239 ~~i~-~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~~~~~~~ 317 (662)
+++. ...+..+ ..++.. ....++..-.....+... ..+||||..|...+..++. ....
T Consensus 69 ~~~~~~~~~~~~-~~~~r~-----~~~~~~~~~~~~~~~~~~--------~~~pDv~i~~~g~~~~~~~--~~~~----- 127 (419)
T cd03806 69 FFLLKYRKLVEA-STYPRF-----TLLGQALGSMILGLEALL--------KLVPDIFIDTMGYPFTYPL--VRLL----- 127 (419)
T ss_pred EEEecceeeecc-ccCCce-----eeHHHHHHHHHHHHHHHH--------hcCCCEEEEcCCcccHHHH--HHHh-----
Confidence 6653 2112111 122210 112221111111111110 1169999888633332222 2222
Q ss_pred CCCCcEEEEecCCCCCCCCChhhhh-hcCC----ChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCcc
Q 006091 318 YKDARSILVIHNLSHQGVEPAATYK-NLGL----PSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 392 (662)
Q Consensus 318 ~~gip~v~tiH~~~~~~~~~~~~~~-~~~l----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~~ 392 (662)
.++|+|+.+|-.. ........ ..+- ...+..+.. .. .+ .+.+.+.-...+++..+..+|.++++|++
T Consensus 128 -~~~~~i~y~h~P~---~~~d~l~~~~~~~~~~~~~~~~~~~~-~~-~~--~k~~y~~~~~~~~~~~~~~aD~ii~~S~~ 199 (419)
T cd03806 128 -GGCPVGAYVHYPT---ISTDMLQKVRSREASYNNSATIARSP-VL-SK--AKLLYYRLFAFLYGLAGSFADVVMVNSTW 199 (419)
T ss_pred -cCCeEEEEecCCc---chHHHHHHHhhccccccCccchhccc-hH-HH--HHHHHHHHHHHHHHHHhhcCCEEEECCHH
Confidence 4789999999210 00011100 0000 000000000 00 00 00111122224677788899999999999
Q ss_pred hhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEEE
Q 006091 393 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 472 (662)
Q Consensus 393 ~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il 472 (662)
..+.+.. .+.. ..++.+|+||+|++.+.+.... ...+.++|+
T Consensus 200 ~~~~~~~---------~~~~-~~~~~vi~~gvd~~~~~~~~~~----------------------------~~~~~~~il 241 (419)
T cd03806 200 TRNHIRS---------LWKR-NTKPSIVYPPCDVEELLKLPLD----------------------------EKTRENQIL 241 (419)
T ss_pred HHHHHHH---------HhCc-CCCcEEEcCCCCHHHhcccccc----------------------------cccCCcEEE
Confidence 8887752 2222 2479999999998766533210 013567999
Q ss_pred EEecCCCccCHHHHHHHHHhccC-------CCeEEEEEeCCCh----hhHHHHHHHHhhcC-CcEEEEcCC-ChHHHHHH
Q 006091 473 FIGRLDYQKGIDLIRLAAPEILA-------DDIQFVMLGSGDP----QFESWMRDTEATYK-DKYRGWVGF-NVPISHRI 539 (662)
Q Consensus 473 ~vGrl~~~Kg~d~Ll~A~~~l~~-------~d~~lvivG~g~~----~~~~~~~~l~~~~~-~~~~~~~~~-~~~~~~~l 539 (662)
|+||+.+.||++.+++|++.+.+ ++++|+|+|++.. .+.+.++++..... ...+.+++. +.+++..+
T Consensus 242 ~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~~l~~~ 321 (419)
T cd03806 242 SIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVVNAPFEELLEE 321 (419)
T ss_pred EEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEecCCCHHHHHHH
Confidence 99999999999999999999865 2599999998742 23333344333322 122333333 56677899
Q ss_pred HHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCccc-ccccc---cccccccCCCCccceEEECCCCHHHHHHHHHHH
Q 006091 540 TAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGL-RDTVE---NFNPFAREGSGEGTGWSFLPLSEESMLTALRFA 615 (662)
Q Consensus 540 l~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~-~eii~---~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~ 615 (662)
|+.||++++||..|+||++++||||||+|||+++.||. .|++. + +.+|++++ |+++++++|.++
T Consensus 322 l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~----------g~~G~l~~--d~~~la~ai~~l 389 (419)
T cd03806 322 LSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDG----------GPTGFLAS--TAEEYAEAIEKI 389 (419)
T ss_pred HHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCC----------CCceEEeC--CHHHHHHHHHHH
Confidence 99999999999999999999999999999999999775 57887 6 78999984 899999999999
Q ss_pred HHHhhhCHHHHHHHHHHH--HHhcCCHHHHHH
Q 006091 616 IRTYREHKSSWEGLMRRG--MEKDYTWENAAI 645 (662)
Q Consensus 616 l~~~~~~~~~~~~l~~~~--~~~~fs~e~~a~ 645 (662)
+++ +++.+..+.+++ +.++|+|+.+.+
T Consensus 390 l~~---~~~~~~~~~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 390 LSL---SEEERLRIRRAARSSVKRFSDEEFER 418 (419)
T ss_pred HhC---CHHHHHHHHHHHHHHHHhhCHHHhcc
Confidence 972 333333343333 468899998653
No 59
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.97 E-value=2.7e-30 Score=282.57 Aligned_cols=223 Identities=17% Similarity=0.211 Sum_probs=170.9
Q ss_pred hhHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHh
Q 006091 373 VNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQC 452 (662)
Q Consensus 373 ~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~ 452 (662)
..+++..++.+|.++++|+..++.+.. .......++.+||||+|.+.|.+....
T Consensus 163 ~~~e~~~~~~ad~vi~~S~~~~~~l~~---------~~~~~~~~v~vipngvd~~~f~~~~~~----------------- 216 (397)
T TIGR03087 163 LAYERAIAARFDAATFVSRAEAELFRR---------LAPEAAGRITAFPNGVDADFFSPDRDY----------------- 216 (397)
T ss_pred HHHHHHHHhhCCeEEEcCHHHHHHHHH---------hCCCCCCCeEEeecccchhhcCCCccc-----------------
Confidence 356788889999999999998877642 222345689999999999888654321
Q ss_pred HHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHH----HHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhcCCcEE
Q 006091 453 KIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRL----AAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYR 526 (662)
Q Consensus 453 k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~----A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~ 526 (662)
...++ ++.++|+|+|++.+.||++.+++ +++.+.+ ++++|+|+|+|+. ..++.+....++.+.
T Consensus 217 ------~~~~~--~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~---~~~~~l~~~~~V~~~ 285 (397)
T TIGR03087 217 ------PNPYP--PGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS---PAVRALAALPGVTVT 285 (397)
T ss_pred ------cCCCC--CCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh---HHHHHhccCCCeEEe
Confidence 00111 35678999999999999999884 4555543 5899999999963 223344333445666
Q ss_pred EEcCCChHHHHHHHHhcCEEEEcCCC-CCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCH
Q 006091 527 GWVGFNVPISHRITAGCDILLMPSRF-EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSE 605 (662)
Q Consensus 527 ~~~~~~~~~~~~ll~~aDi~v~PS~~-E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~ 605 (662)
|++. + +..+|+.||++|+||.. ||+|++++||||||+|||+|+.++. .+... +++|++++ .|+
T Consensus 286 G~v~---~-~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~----------~~~g~lv~-~~~ 349 (397)
T TIGR03087 286 GSVA---D-VRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDAL----------PGAELLVA-ADP 349 (397)
T ss_pred eecC---C-HHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCcccc-ccccc----------CCcceEeC-CCH
Confidence 6652 3 45799999999999974 9999999999999999999997532 23333 46899987 899
Q ss_pred HHHHHHHHHHHHHhhhCHHHHHHHHHHH---HHhcCCHHHHHHHHHHHHH
Q 006091 606 ESMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFE 652 (662)
Q Consensus 606 ~~la~aI~~~l~~~~~~~~~~~~l~~~~---~~~~fs~e~~a~~~~~iy~ 652 (662)
++++++|.++++ |++.+++|++++ +.++|+|+++++++.++|+
T Consensus 350 ~~la~ai~~ll~----~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 350 ADFAAAILALLA----NPAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred HHHHHHHHHHHc----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 999999999887 888888998887 3578999999999999885
No 60
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.97 E-value=3.1e-28 Score=256.38 Aligned_cols=340 Identities=21% Similarity=0.219 Sum_probs=225.7
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEe
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 232 (662)
||++++..+. .||.++++..++++|.+.||+|.|++.......... .. ..
T Consensus 1 kIl~~~~~~~----~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~--~~------------------------~~ 50 (353)
T cd03811 1 KILFVIPSLG----GGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLEL--LP------------------------SN 50 (353)
T ss_pred CeEEEeeccc----CCCcchhHHHHHHHHHhcCceEEEEEcCCCCccccc--cc------------------------cc
Confidence 6899998643 599999999999999999999999987643211000 00 00
Q ss_pred eCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCC-CcchHHHHHHhh
Q 006091 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDW-HAGLVPVLLASK 311 (662)
Q Consensus 233 ~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~-~~~l~~~ll~~~ 311 (662)
............ .. ...... ....+.+.. .+||+||+|.. ...++..+.. +
T Consensus 51 ~~~~~~~~~~~~-------~~--------~~~~~~----~~~~~~~~~--------~~~dii~~~~~~~~~~~~~~~~-~ 102 (353)
T cd03811 51 VKLIPVRVLKLK-------SL--------RDLLAI----LRLRRLLRK--------EKPDVVISHLTTTPNVLALLAA-R 102 (353)
T ss_pred hhhhceeeeecc-------cc--------cchhHH----HHHHHHHHh--------cCCCEEEEcCccchhHHHHHHh-h
Confidence 000000000000 00 001111 111122111 16999999987 3333333222 1
Q ss_pred cCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCc
Q 006091 312 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 391 (662)
Q Consensus 312 ~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~ 391 (662)
.++|+++++|+......... .....+.+..+..+|.++++|+
T Consensus 103 -------~~~~~i~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~d~ii~~s~ 144 (353)
T cd03811 103 -------LGTKLIVWEHNSLSLELKRK-------------------------------LRLLLLIRKLYRRADKIVAVSE 144 (353)
T ss_pred -------cCCceEEEEcCcchhhhccc-------------------------------hhHHHHHHhhccccceEEEecc
Confidence 26899999998632111000 0000245667789999999999
Q ss_pred chhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEE
Q 006091 392 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 471 (662)
Q Consensus 392 ~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~I 471 (662)
..++.+.. .++.+..++.+||||+|...+.+.... .. .++.+ .+.++|
T Consensus 145 ~~~~~~~~---------~~~~~~~~~~vi~~~~~~~~~~~~~~~------------------~~---~~~~~--~~~~~i 192 (353)
T cd03811 145 GVKEDLLK---------LLGIPPDKIEVIYNPIDIEEIRALAEE------------------PL---ELGIP--PDGPVI 192 (353)
T ss_pred chhhhHHH---------hhcCCccccEEecCCcChhhcCcccch------------------hh---hcCCC--CCceEE
Confidence 99887752 333345789999999998877654321 00 22323 567899
Q ss_pred EEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEEEc
Q 006091 472 GFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMP 549 (662)
Q Consensus 472 l~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~P 549 (662)
+++|++.+.||++.++++++.+.+ ++++|+++|.++ ......+.+........+.+.++.++ +..+|+.||++++|
T Consensus 193 ~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~-~~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~~~~~d~~i~p 270 (353)
T cd03811 193 LAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGP-LREELEALAKELGLADRVHFLGFQSN-PYPYLKAADLFVLS 270 (353)
T ss_pred EEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCc-cHHHHHHHHHhcCCCccEEEecccCC-HHHHHHhCCEEEeC
Confidence 999999999999999999999976 389999999985 22333333333222233445554433 55899999999999
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 006091 550 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 629 (662)
Q Consensus 550 S~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l 629 (662)
|.+|++|++++|||++|+|||+++.||+.|++.+ +.+|+++++.|++++++.+..+.. +.++++.+.++
T Consensus 271 s~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~----------~~~g~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~ 339 (353)
T cd03811 271 SRYEGFPNVLLEAMALGTPVVATDCPGPREILED----------GENGLLVPVGDEAALAAAALALLD-LLLDPELRERL 339 (353)
T ss_pred cccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcC----------CCceEEECCCCHHHHHHHHHHHHh-ccCChHHHHHH
Confidence 9999999999999999999999999999999998 889999999999999655544433 33577777777
Q ss_pred HHHH
Q 006091 630 MRRG 633 (662)
Q Consensus 630 ~~~~ 633 (662)
+.++
T Consensus 340 ~~~~ 343 (353)
T cd03811 340 AAAA 343 (353)
T ss_pred HHHH
Confidence 7743
No 61
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.96 E-value=2.4e-28 Score=267.72 Aligned_cols=440 Identities=17% Similarity=0.198 Sum_probs=244.6
Q ss_pred ccCcHHHHHhhHHHHHHhC-CCcEEEEeecCCCCCCcccchhh--hcccCceeEE-eecCCceEEEEEEEeeCCce-EEE
Q 006091 166 KTGGLGDVCGSLPVALAAR-GHRVMVVSPRYFNGTAADENFTL--AKDLGCCMKI-CCFGGEQEIAFFHEYREGVD-WVF 240 (662)
Q Consensus 166 ~~GG~~~~~~~La~~L~~~-GheV~Vit~~~~~~~~~~~~~~~--~~~~~~~~~v-~~~~~~~~~~~~~~~~~gv~-v~~ 240 (662)
+.||+-+++..-|..+++. |-+..+|.|...+.. ...+.. ..+..-...+ ........+.+.+...+|-+ ++.
T Consensus 14 KVGGIyTVi~tka~~~~~~~~d~y~~iGP~~~~~~--~~e~e~~~~~~~~~~~~~~~~~~~g~~v~~GrW~i~G~P~viL 91 (590)
T cd03793 14 KVGGIYTVIKSKAPVTVEEWGDRYCLIGPYNEAKA--RTEVEILEPPNPALRQALDRMRSRGIKVHFGRWLIEGYPKVVL 91 (590)
T ss_pred cCCCeeeeeecCcHHHHHHhCCeEEEECCCCcccc--CCccccCCCCchHHHHHHHHHHhCCCeEEEeEEEcCCCCeEEE
Confidence 5899999999888888875 888999988754211 111100 0000000000 00112223444455666644 444
Q ss_pred EeCCCCC-CCCCCCCCCC---------CCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHh
Q 006091 241 VDHPSYH-RPGNPYGDIN---------GAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 310 (662)
Q Consensus 241 i~~~~~~-~~~~~y~~~~---------~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~ 310 (662)
++..++. .....+.+.| +++.. -.-.+|+.++...+..+... +...++||+|+|+|+++..+..++.
T Consensus 92 ~D~~~~~~~~~~~~~~lW~~~~i~s~~~~~d~--nea~~fgy~~~~~i~~~~~~-~~~~~~dViH~HeWm~g~a~~~lK~ 168 (590)
T cd03793 92 FDIGSAAWKLDEWKGELWELCGIGSPEGDRET--NDAIIFGFLVAWFLGEFAEQ-FDDEPAVVAHFHEWQAGVGLPLLRK 168 (590)
T ss_pred EeCchhhhhHHHHHHHHHHHcCCCCCCCCCcc--hHHHHHHHHHHHHHHHHHhh-ccCCCCeEEEEcchhHhHHHHHHHH
Confidence 4543322 1111111111 11111 11123443333332211100 0124689999999999998888886
Q ss_pred hcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhcccccccccccccc-ccCcchhhhHHHHHHHhcCEEEec
Q 006091 311 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTH-ALDTGEAVNVLKGAIVTADRLLTV 389 (662)
Q Consensus 311 ~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~k~~~~~ad~ii~v 389 (662)
.. .++|+|+|+|.... |+. ... |. ...+..+. .+ .|.+.. ...-..+..+++.+...||++++|
T Consensus 169 ~~------~~VptVfTtHAT~~-GR~---l~~--g~-~~~y~~l~-~~-~~d~eA~~~~I~~r~~iE~~aa~~Ad~fttV 233 (590)
T cd03793 169 RK------VDVSTIFTTHATLL-GRY---LCA--GN-VDFYNNLD-YF-DVDKEAGKRGIYHRYCIERAAAHCAHVFTTV 233 (590)
T ss_pred hC------CCCCEEEEeccccc-ccc---ccc--CC-cccchhhh-hc-chhhhhhcccchHHHHHHHHHHhhCCEEEEC
Confidence 43 68999999997631 111 000 00 00000000 00 000000 000123335788889999999999
Q ss_pred CcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccc--hhHH----hHHHHHHHhCCC
Q 006091 390 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLS--GKVQ----CKIALQKELGLP 463 (662)
Q Consensus 390 S~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~--~~~~----~k~~~r~~lgl~ 463 (662)
|+.+++++. .+++.++++ |||||+|...|.+..... .+- .|.+ .+..++.+++++
T Consensus 234 S~it~~E~~---------~Ll~~~pd~--ViPNGid~~~f~~~~e~~--------~~~~~~k~ki~~f~~~~~~~~~~~~ 294 (590)
T cd03793 234 SEITAYEAE---------HLLKRKPDV--VLPNGLNVKKFSALHEFQ--------NLHAQSKEKINEFVRGHFYGHYDFD 294 (590)
T ss_pred ChHHHHHHH---------HHhCCCCCE--EeCCCcchhhcccchhhh--------hhhHHhhhhhhHHHHHHHhhhcCCC
Confidence 999999884 566777666 999999999987643210 000 0000 112346666765
Q ss_pred CCCCCCEEEE-EecCCC-ccCHHHHHHHHHhccC------CC---eEEEEEeCCC-----------hhh---HHHHHH--
Q 006091 464 IRPDCPLIGF-IGRLDY-QKGIDLIRLAAPEILA------DD---IQFVMLGSGD-----------PQF---ESWMRD-- 516 (662)
Q Consensus 464 ~~~~~~~Il~-vGrl~~-~Kg~d~Ll~A~~~l~~------~d---~~lvivG~g~-----------~~~---~~~~~~-- 516 (662)
+++++++| +||++. +||+|.+++|+++|.. .+ +-|+++-.+. +.. .+-+..
T Consensus 295 --~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~ 372 (590)
T cd03793 295 --LDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVK 372 (590)
T ss_pred --CCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHH
Confidence 67788877 799998 9999999999999854 12 3355543320 100 000001
Q ss_pred --------------------------------------------------------------HHh-------hcCCcEEE
Q 006091 517 --------------------------------------------------------------TEA-------TYKDKYRG 527 (662)
Q Consensus 517 --------------------------------------------------------------l~~-------~~~~~~~~ 527 (662)
+.. ...++++.
T Consensus 373 ~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif 452 (590)
T cd03793 373 EKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVF 452 (590)
T ss_pred HHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEE
Confidence 000 00012221
Q ss_pred EcCC---Ch----HHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEE
Q 006091 528 WVGF---NV----PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSF 600 (662)
Q Consensus 528 ~~~~---~~----~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~ 600 (662)
...| .+ ....++|+.||++|+||++|+||++++||||||+|+|+|+.+|+.+.+.+.- +.++..|+++
T Consensus 453 ~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v-----~~~~~~gi~V 527 (590)
T cd03793 453 HPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHI-----EDPESYGIYI 527 (590)
T ss_pred cccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHh-----ccCCCceEEE
Confidence 1111 00 1134789999999999999999999999999999999999999954443200 0012467777
Q ss_pred CC-------CCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH----HHhcCCHHHHHHHHHHHHHHhhh
Q 006091 601 LP-------LSEESMLTALRFAIRTYREHKSSWEGLMRRG----MEKDYTWENAAIQYEQVFEWASI 656 (662)
Q Consensus 601 ~~-------~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~----~~~~fs~e~~a~~~~~iy~~~~~ 656 (662)
.+ .++++++++|.+++. .+.++++..++ ..+.|+|++.++.|.+.|+.++.
T Consensus 528 ~~r~~~~~~e~v~~La~~m~~~~~-----~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~ 589 (590)
T cd03793 528 VDRRFKSPDESVQQLTQYMYEFCQ-----LSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALS 589 (590)
T ss_pred ecCCccchHHHHHHHHHHHHHHhC-----CcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 63 334455555554442 23444444443 46889999999999999998875
No 62
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.96 E-value=6.6e-28 Score=258.83 Aligned_cols=206 Identities=19% Similarity=0.188 Sum_probs=163.2
Q ss_pred hhHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHh
Q 006091 373 VNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQC 452 (662)
Q Consensus 373 ~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~ 452 (662)
..+++.+++.+|.++++|+..++.+.. .+ ..+..+|+||+|.+.|.+..
T Consensus 144 ~~~~~~~~~~~d~ii~~S~~~~~~~~~---------~~---~~~~~vi~~~~d~~~~~~~~------------------- 192 (351)
T cd03804 144 RIWDRRSAARVDYFIANSRFVARRIKK---------YY---GRDATVIYPPVDTDRFTPAE------------------- 192 (351)
T ss_pred HHHHHHHhcCCCEEEECCHHHHHHHHH---------Hh---CCCcEEECCCCCHhhcCcCC-------------------
Confidence 345667788999999999999887742 12 23467999999988775432
Q ss_pred HHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCC
Q 006091 453 KIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFN 532 (662)
Q Consensus 453 k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 532 (662)
...+.++++||+.+.||++.+++|++.+. ++|+|+|+|+. .+. ++. ....++.+.|++ +
T Consensus 193 -------------~~~~~il~~G~~~~~K~~~~li~a~~~~~---~~l~ivG~g~~-~~~-l~~-~~~~~V~~~g~~--~ 251 (351)
T cd03804 193 -------------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG---KRLVVIGDGPE-LDR-LRA-KAGPNVTFLGRV--S 251 (351)
T ss_pred -------------CCCCEEEEEEcCccccChHHHHHHHHHCC---CcEEEEECChh-HHH-HHh-hcCCCEEEecCC--C
Confidence 13457899999999999999999999883 89999999962 222 222 222234444444 5
Q ss_pred hHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHH
Q 006091 533 VPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTAL 612 (662)
Q Consensus 533 ~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI 612 (662)
.+++..+|+.||++++||. |+||++++|||+||+|||+++.||..|++.+ +.+|+++++.|+++++++|
T Consensus 252 ~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~----------~~~G~~~~~~~~~~la~~i 320 (351)
T cd03804 252 DEELRDLYARARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVID----------GVTGILFEEQTVESLAAAV 320 (351)
T ss_pred HHHHHHHHHhCCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeC----------CCCEEEeCCCCHHHHHHHH
Confidence 6667899999999999999 9999999999999999999999999999998 8899999999999999999
Q ss_pred HHHHHHhhhCH-HHHHHHHHHHHHhcCCHHHHHHHH
Q 006091 613 RFAIRTYREHK-SSWEGLMRRGMEKDYTWENAAIQY 647 (662)
Q Consensus 613 ~~~l~~~~~~~-~~~~~l~~~~~~~~fs~e~~a~~~ 647 (662)
..+++ ++ ...+++.+++ +.|+|++..+++
T Consensus 321 ~~l~~----~~~~~~~~~~~~~--~~~~~~~~~~~~ 350 (351)
T cd03804 321 ERFEK----NEDFDPQAIRAHA--ERFSESRFREKI 350 (351)
T ss_pred HHHHh----CcccCHHHHHHHH--HhcCHHHHHHHh
Confidence 99887 44 3444444443 579999998875
No 63
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.96 E-value=1.1e-26 Score=256.54 Aligned_cols=374 Identities=13% Similarity=0.110 Sum_probs=226.3
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhC-CCcEEEEeecCCCCCCcccchhhhcccCceeE--Eeec-CCceEE
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR-GHRVMVVSPRYFNGTAADENFTLAKDLGCCMK--ICCF-GGEQEI 226 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~-GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~--v~~~-~~~~~~ 226 (662)
..+|++||.-..|+. -|.+.--.--|.+|++. |++|+++.|--.. .++.-.|+.......+.. .-+. |-....
T Consensus 322 ~r~~~ivTtAslPWm--TGtavnpL~rAayLa~~~~~~VtlviPWl~~-~dq~~vy~~~~~F~~p~eQe~~ir~wl~~r~ 398 (794)
T PLN02501 322 KRHVAIVTTASLPWM--TGTAVNPLFRAAYLAKSAKQNVTLLVPWLCK-SDQELVYPNNLTFSSPEEQESYIRNWLEERI 398 (794)
T ss_pred CCeEEEEEcccCccc--ccccccHHHHHHHhcccCCceEEEEEecCCc-cccccccCCCcccCCHHHHHHHHHHHHHHhc
Confidence 478999999999994 66666555667778888 7999999885332 122233332110000000 0000 000000
Q ss_pred EEEEEeeCCceEEEEeCCCCCCC-CCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCC-CcchH
Q 006091 227 AFFHEYREGVDWVFVDHPSYHRP-GNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDW-HAGLV 304 (662)
Q Consensus 227 ~~~~~~~~gv~v~~i~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~-~~~l~ 304 (662)
++ .....+.+++.. |... ..++. ..-+.. .+. ..+|||||+++. +.++.
T Consensus 399 g~----~~~~~i~fYpg~-~~~~~~SI~p------------~gdI~~----~L~--------~f~PDVVHLatP~~LGw~ 449 (794)
T PLN02501 399 GF----KADFKISFYPGK-FSKERRSIIP------------AGDTSQ----FIP--------SKDADIAILEEPEHLNWY 449 (794)
T ss_pred CC----CCCceEEeecch-hccCCccccc------------hHHHHH----Hhh--------ccCCCEEEECCchhhccH
Confidence 00 123344444322 2111 11110 011111 111 227999999973 44555
Q ss_pred --HHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHh
Q 006091 305 --PVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVT 382 (662)
Q Consensus 305 --~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 382 (662)
+..++.++ + |+|.++|+.. +. .....+.. +.. .....++...+..
T Consensus 450 ~~Glr~ArKl-------~-PVVasyHTny-----~e-Yl~~y~~g--~L~-----------------~~llk~l~~~v~r 496 (794)
T PLN02501 450 HHGKRWTDKF-------N-HVVGVVHTNY-----LE-YIKREKNG--ALQ-----------------AFFVKHINNWVTR 496 (794)
T ss_pred HHHHHHHHHc-------C-CeEEEEeCCc-----HH-HHhHhcch--hHH-----------------HHHHHHHHHHHHH
Confidence 45555543 5 8999999742 11 11111110 000 0001112222222
Q ss_pred --cCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHh
Q 006091 383 --ADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKEL 460 (662)
Q Consensus 383 --ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~l 460 (662)
+|.|+++|....+ + +...+..+ ||||+..|.|.... ..++++
T Consensus 497 ~hcD~VIaPS~atq~-L---------------~~~vI~nV-nGVDte~F~P~~r~-------------------~~~r~l 540 (794)
T PLN02501 497 AYCHKVLRLSAATQD-L---------------PKSVICNV-HGVNPKFLKIGEKV-------------------AEEREL 540 (794)
T ss_pred hhCCEEEcCCHHHHH-h---------------cccceeec-ccccccccCCcchh-------------------HHHHhc
Confidence 8999999966552 2 11223222 69999999876531 223566
Q ss_pred CCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHH
Q 006091 461 GLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHR 538 (662)
Q Consensus 461 gl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 538 (662)
+++ ...+.++|+||+.++||++.|++|++.+.+ ++++|+|+|+|+ ..+. ++.+....... +.+++..+. ...
T Consensus 541 gi~--~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP-~ree-Le~la~eLgL~-V~FLG~~dd-~~~ 614 (794)
T PLN02501 541 GQQ--AFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGE-DAHE-VQRAAKRLDLN-LNFLKGRDH-ADD 614 (794)
T ss_pred CCc--cccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCc-cHHH-HHHHHHHcCCE-EEecCCCCC-HHH
Confidence 665 334568999999999999999999998865 489999999996 3333 33333333333 456665443 347
Q ss_pred HHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHH
Q 006091 539 ITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 618 (662)
Q Consensus 539 ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~ 618 (662)
+|+.+||||+||.+|+||++++||||||+|||+++.+|. +++.+ +.+|+++ .|+++++++|.+++.
T Consensus 615 lyasaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~----------g~nGll~--~D~EafAeAI~~LLs- 680 (794)
T PLN02501 615 SLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRS----------FPNCLTY--KTSEDFVAKVKEALA- 680 (794)
T ss_pred HHHhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEee----------cCCeEec--CCHHHHHHHHHHHHh-
Confidence 999999999999999999999999999999999999985 44665 6788775 689999999999997
Q ss_pred hhhCHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 006091 619 YREHKSSWEGLMRRGMEKDYTWENAAIQYEQVF 651 (662)
Q Consensus 619 ~~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy 651 (662)
++.....+.. ...|||+.+++++++.-
T Consensus 681 ---d~~~rl~~~a---~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 681 ---NEPQPLTPEQ---RYNLSWEAATQRFMEYS 707 (794)
T ss_pred ---CchhhhHHHH---HhhCCHHHHHHHHHHhh
Confidence 4443332222 34899999999998764
No 64
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.96 E-value=2.7e-27 Score=264.26 Aligned_cols=220 Identities=13% Similarity=0.083 Sum_probs=169.1
Q ss_pred HHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHH
Q 006091 380 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 459 (662)
Q Consensus 380 ~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~ 459 (662)
+..+|.++++|+..++.+.... ..+.....++.+||||++...+.+..
T Consensus 268 ~~~~D~iI~~S~~~~~~l~~~~------~~~~~~~~ki~viP~g~~~~~~~~~~-------------------------- 315 (500)
T TIGR02918 268 ADYIDFFITATDIQNQILKNQF------KKYYNIEPRIYTIPVGSLDELQYPEQ-------------------------- 315 (500)
T ss_pred hhhCCEEEECCHHHHHHHHHHh------hhhcCCCCcEEEEcCCCcccccCccc--------------------------
Confidence 4678999999998887775311 01123356899999998654332211
Q ss_pred hCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHH
Q 006091 460 LGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISH 537 (662)
Q Consensus 460 lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 537 (662)
. ....+|+++||+.+.||++.+++|+..+.+ ++++|+|+|+|+ ..+.+.+.+........+.+.|+.+ +.
T Consensus 316 ---~--r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~-~~~~l~~~i~~~~l~~~V~f~G~~~--~~ 387 (500)
T TIGR02918 316 ---E--RKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGG-EKQKLQKIINENQAQDYIHLKGHRN--LS 387 (500)
T ss_pred ---c--cCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECch-hHHHHHHHHHHcCCCCeEEEcCCCC--HH
Confidence 0 234689999999999999999999999865 599999999996 3333333333332234455777542 55
Q ss_pred HHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCc-ccccccccccccccCCCCccceEEECCC----C----HHHH
Q 006091 538 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG-GLRDTVENFNPFAREGSGEGTGWSFLPL----S----EESM 608 (662)
Q Consensus 538 ~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~g-g~~eii~~~~~~~~~~~~~~~G~l~~~~----d----~~~l 608 (662)
.+|+.||++|+||..|+||++++||||||+|||+++++ |.+|+|.+ +.+|++++++ | ++++
T Consensus 388 ~~~~~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~----------g~nG~lv~~~~~~~d~~~~~~~l 457 (500)
T TIGR02918 388 EVYKDYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIED----------NKNGYLIPIDEEEDDEDQIITAL 457 (500)
T ss_pred HHHHhCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccC----------CCCEEEEeCCccccchhHHHHHH
Confidence 79999999999999999999999999999999999986 89999999 9999999843 3 7788
Q ss_pred HHHHHHHHHHhhhCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHh
Q 006091 609 LTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWA 654 (662)
Q Consensus 609 a~aI~~~l~~~~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy~~~ 654 (662)
|++|..++. ++.+.+|++++ ..+.|+|++++++|.++++++
T Consensus 458 a~~I~~ll~-----~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 458 AEKIVEYFN-----SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVREV 500 (500)
T ss_pred HHHHHHHhC-----hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 888887763 34678888887 468999999999999999864
No 65
>PLN02275 transferase, transferring glycosyl groups
Probab=99.96 E-value=7.5e-27 Score=253.11 Aligned_cols=325 Identities=14% Similarity=0.006 Sum_probs=205.7
Q ss_pred CcHHHHHhhHHHHHHhCCC-cEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEeeCCceEEEEeCCCC
Q 006091 168 GGLGDVCGSLPVALAARGH-RVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSY 246 (662)
Q Consensus 168 GG~~~~~~~La~~L~~~Gh-eV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~gv~v~~i~~~~~ 246 (662)
.|.+..+..++..|+++|| +|+|++...+.. +.. ....+++++++++.+..
T Consensus 15 ~g~~~r~~~~~~~l~~~~~~~v~vi~~~~~~~------~~~----------------------~~~~~~v~v~r~~~~~~ 66 (371)
T PLN02275 15 FGRSPRMQYHALSLARQASFQVDVVAYGGSEP------IPA----------------------LLNHPSIHIHLMVQPRL 66 (371)
T ss_pred CCCCHHHHHHHHHHHhcCCceEEEEEecCCCC------CHH----------------------HhcCCcEEEEECCCccc
Confidence 6778888999999999886 799998542210 000 11235688888864221
Q ss_pred CCCCCCCCCCCCCCCchhHHHHHH----HHHHhhhccccCCCCCCCCCccEEEeCCCCcc--hHHHHHHhhcCCCCCCCC
Q 006091 247 HRPGNPYGDINGAFGDNQFRYTLL----CYAACEAPLVLPLGGFTYGEKCIFLVNDWHAG--LVPVLLASKYRPHGVYKD 320 (662)
Q Consensus 247 ~~~~~~y~~~~~~~~~~~~~~~~~----~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~--l~~~ll~~~~~~~~~~~g 320 (662)
......+ -....+..+ ...+...... +..+||+||+|+.... .+...+..+. .+
T Consensus 67 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~DvV~~~~~~~~~~~~~~~~~~~~------~~ 126 (371)
T PLN02275 67 LQRLPRV--------LYALALLLKVAIQFLMLLWFLCV------KIPRPDVFLVQNPPSVPTLAVVKLACWL------RR 126 (371)
T ss_pred ccccccc--------hHHHHHHHHHHHHHHHHHHHHHh------hCCCCCEEEEeCCCCcHHHHHHHHHHHH------hC
Confidence 1110000 110011111 1112211100 1227999999974432 2233333333 47
Q ss_pred CcEEEEecCCCCCCCCChhhhhhcCCC-hhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCcchhhhhhc
Q 006091 321 ARSILVIHNLSHQGVEPAATYKNLGLP-SEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITT 399 (662)
Q Consensus 321 ip~v~tiH~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~ 399 (662)
+|+|+++|+..+. ....+.. .... ......+++..++.+|.++++|+.+.+.+.+
T Consensus 127 ~p~v~~~h~~~~~-------~~~~~~~~~~~~-----------------~~~~~~~e~~~~~~ad~ii~~S~~~~~~l~~ 182 (371)
T PLN02275 127 AKFVIDWHNFGYT-------LLALSLGRSHPL-----------------VRLYRWYERHYGKMADGHLCVTKAMQHELDQ 182 (371)
T ss_pred CCEEEEcCCccHH-------HHhcccCCCCHH-----------------HHHHHHHHHHHHhhCCEEEECCHHHHHHHHH
Confidence 9999999975210 0001110 0000 0122345677788999999999999887742
Q ss_pred ccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEEEEEecCCC
Q 006091 400 VEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDY 479 (662)
Q Consensus 400 ~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il~vGrl~~ 479 (662)
.++. ++.+|+||+ .+.|.+.... . .+. .+...+++++||+.+
T Consensus 183 ---------~~g~---~i~vi~n~~-~~~f~~~~~~----------------------~--~~~-~~~~~~i~~~grl~~ 224 (371)
T PLN02275 183 ---------NWGI---RATVLYDQP-PEFFRPASLE----------------------I--RLR-PNRPALVVSSTSWTP 224 (371)
T ss_pred ---------hcCC---CeEEECCCC-HHHcCcCCch----------------------h--ccc-CCCcEEEEEeCceec
Confidence 1122 278999995 4555543211 0 011 023457889999999
Q ss_pred ccCHHHHHHHHHhcc-------------------CCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCC-ChHHHHHH
Q 006091 480 QKGIDLIRLAAPEIL-------------------ADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRI 539 (662)
Q Consensus 480 ~Kg~d~Ll~A~~~l~-------------------~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~l 539 (662)
.||++.+++|+..+. .++++|+|+|+|+ ..+++.+.+.+....++..+.++ +.+++..+
T Consensus 225 ~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~-~~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~ 303 (371)
T PLN02275 225 DEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGP-QKAMYEEKISRLNLRHVAFRTMWLEAEDYPLL 303 (371)
T ss_pred cCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCC-CHHHHHHHHHHcCCCceEEEcCCCCHHHHHHH
Confidence 999999999998762 2589999999996 34444445544333344444432 56778899
Q ss_pred HHhcCEEEEcC--C-CCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHH
Q 006091 540 TAGCDILLMPS--R-FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFA 615 (662)
Q Consensus 540 l~~aDi~v~PS--~-~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~ 615 (662)
|+.||++++|+ . .|++|++++||||||+|||+++.||.+|+|.+ +.+|++++ |+++++++|.++
T Consensus 304 l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~----------g~~G~lv~--~~~~la~~i~~l 370 (371)
T PLN02275 304 LGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKD----------GKNGLLFS--SSSELADQLLEL 370 (371)
T ss_pred HHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccC----------CCCeEEEC--CHHHHHHHHHHh
Confidence 99999999864 2 38999999999999999999999999999999 89999997 689999998765
No 66
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=99.96 E-value=3.1e-29 Score=255.39 Aligned_cols=241 Identities=36% Similarity=0.560 Sum_probs=174.0
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCcee--EEeecCCceEEEEEE
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCM--KICCFGGEQEIAFFH 230 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~ 230 (662)
||++|+.|+.|+.++||++.++..|+++|+++||+|.||+|.|+.............+..... .+.+.. .....++.
T Consensus 1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~v~~ 79 (245)
T PF08323_consen 1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVPVGV-WYEVRVYR 79 (245)
T ss_dssp EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEEEE-----EEEEE
T ss_pred CEEEEEcccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccchhhhhhhhcceEEEEecccccccccccc-ceEEEEEE
Confidence 799999999999999999999999999999999999999999854322110000000100000 122211 15667778
Q ss_pred EeeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHh
Q 006091 231 EYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 310 (662)
Q Consensus 231 ~~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~ 310 (662)
...+++++++++++.|..+..+|++..++|.++..||..|++++++.+..+ +| +|||||||||+++++|.+++.
T Consensus 80 ~~~~~v~v~~i~~~~~f~r~~iY~~~~~~~~d~~~rf~~fs~a~le~~~~l---~~---~pDIIH~hDW~tal~p~~lk~ 153 (245)
T PF08323_consen 80 YPVDGVPVYFIDNPEYFDRPGIYGDNGGDYPDNAERFAFFSRAALELLKKL---GW---KPDIIHCHDWHTALAPLYLKE 153 (245)
T ss_dssp EEETTEEEEEEESHHHHGSSSSSBSTSSBHTTHHHHHHHHHHHHHHHHCTC---T----S-SEEEEECGGGTTHHHHHHH
T ss_pred EEcCCccEEEecChhhccccceeccCCCcchhHHHHHHHHHHHHHHHHHhh---CC---CCCEEEecCchHHHHHHHhcc
Confidence 888999999999998777777998877789999999999999999987765 33 799999999999999999999
Q ss_pred hcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecC
Q 006091 311 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 390 (662)
Q Consensus 311 ~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS 390 (662)
.....+.+.++|+|+|+||+.+|+.++...+..++++...+.. ...+.+....++++.++..||.|+|||
T Consensus 154 ~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~----------~~~~~~~~~in~lk~gi~~AD~v~TVS 223 (245)
T PF08323_consen 154 RYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQN----------LDEYEFYGQINFLKAGIVYADKVTTVS 223 (245)
T ss_dssp CCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-S----------TTTTEETTEEEHHHHHHHHSSEEEESS
T ss_pred ccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhcc----------ccccccccccCHHHHHHHhcCEeeeCC
Confidence 8765555668999999999999999988777777777543211 122334567899999999999999999
Q ss_pred cchhhhhhcccCCcchhhhh
Q 006091 391 KGYSWEITTVEGGYGLHEIL 410 (662)
Q Consensus 391 ~~~~~~i~~~~~~~~l~~~~ 410 (662)
+.+++++++..+|.||+..+
T Consensus 224 ~~Ya~Ei~~~~~g~GL~~~l 243 (245)
T PF08323_consen 224 PTYAREIQTPEFGEGLEGLL 243 (245)
T ss_dssp HHHHHHTTSHHHHTT-HHHH
T ss_pred HHHHHHHhCcccCCChHHHh
Confidence 99999999998888987765
No 67
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.96 E-value=7.3e-27 Score=256.25 Aligned_cols=220 Identities=15% Similarity=0.172 Sum_probs=173.3
Q ss_pred HHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHH
Q 006091 375 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKI 454 (662)
Q Consensus 375 ~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~ 454 (662)
+.+..+..+|.++++|+..++.+. +.++....++.+++||++...+.+...
T Consensus 176 ~~~~~~~~~d~ii~~S~~~~~~l~---------~~~~~~~~ki~vi~~gv~~~~~~~~~~-------------------- 226 (407)
T cd04946 176 LRRYLLSSLDAVFPCSEQGRNYLQ---------KRYPAYKEKIKVSYLGVSDPGIISKPS-------------------- 226 (407)
T ss_pred HHHHHHhcCCEEEECCHHHHHHHH---------HHCCCccccEEEEECCcccccccCCCC--------------------
Confidence 345567899999999999988775 334555678999999998765543211
Q ss_pred HHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccCC----CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcC
Q 006091 455 ALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILAD----DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVG 530 (662)
Q Consensus 455 ~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~----d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~ 530 (662)
..+.+.|+++|++.+.||++.+++|+..+.+. ++.++++|+|+ ....+.+.+........+.+.|
T Consensus 227 ----------~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~-~~~~l~~~~~~~~~~~~V~f~G 295 (407)
T cd04946 227 ----------KDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGP-LEDTLKELAESKPENISVNFTG 295 (407)
T ss_pred ----------CCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCch-HHHHHHHHHHhcCCCceEEEec
Confidence 13567899999999999999999999998653 57788899985 3333333332222222223444
Q ss_pred C-ChHHHHHHHHh--cCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCC-CHH
Q 006091 531 F-NVPISHRITAG--CDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPL-SEE 606 (662)
Q Consensus 531 ~-~~~~~~~ll~~--aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~-d~~ 606 (662)
+ +.+++.++|+. +|++++||..|++|++++|||+||+|||+|++||++|++.+ +.+|+++++. |++
T Consensus 296 ~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~----------~~~G~l~~~~~~~~ 365 (407)
T cd04946 296 ELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDN----------GGNGLLLSKDPTPN 365 (407)
T ss_pred CCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcC----------CCcEEEeCCCCCHH
Confidence 4 45566678865 78999999999999999999999999999999999999998 7899999864 899
Q ss_pred HHHHHHHHHHHHhhhCHHHHHHHHHHH---HHhcCCHHHHHHHHH
Q 006091 607 SMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYE 648 (662)
Q Consensus 607 ~la~aI~~~l~~~~~~~~~~~~l~~~~---~~~~fs~e~~a~~~~ 648 (662)
+++++|.++++ |++++.+|++++ +.++|+|+...++|.
T Consensus 366 ~la~~I~~ll~----~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 366 ELVSSLSKFID----NEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHh----CHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 99999999887 889999999888 468999999998875
No 68
>PHA01633 putative glycosyl transferase group 1
Probab=99.96 E-value=2.8e-26 Score=241.66 Aligned_cols=234 Identities=16% Similarity=0.213 Sum_probs=167.9
Q ss_pred HHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHH
Q 006091 377 KGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIAL 456 (662)
Q Consensus 377 k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~ 456 (662)
.+.+.+.+.+|++|+..++.+.. .+.+.. + +|+||+|++.|.+.... ..++
T Consensus 87 ~~~m~~~~~vIavS~~t~~~L~~----------~G~~~~-i-~I~~GVD~~~f~p~~~~-----------------~~~~ 137 (335)
T PHA01633 87 NKYLLQDVKFIPNSKFSAENLQE----------VGLQVD-L-PVFHGINFKIVENAEKL-----------------VPQL 137 (335)
T ss_pred HHHHhcCCEEEeCCHHHHHHHHH----------hCCCCc-e-eeeCCCChhhcCccchh-----------------hHHH
Confidence 44556678999999999988763 122222 3 47899999888764321 2356
Q ss_pred HHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccCC------CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcC
Q 006091 457 QKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILAD------DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVG 530 (662)
Q Consensus 457 r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~------d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~ 530 (662)
+++++... ++.++|+++||+.++||++.+++|++.+.++ +++++++|.+ ..+.+....++.+.++++
T Consensus 138 r~~~~~~~-~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~------~~~~l~l~~~V~f~g~~G 210 (335)
T PHA01633 138 KQKLDKDF-PDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK------QFTQLEVPANVHFVAEFG 210 (335)
T ss_pred HHHhCcCC-CCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH------HHHHcCCCCcEEEEecCC
Confidence 66666432 3567899999999999999999999998652 3688888742 122222223445555556
Q ss_pred C-ChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccc-----ccccc---CCCCccceEEEC
Q 006091 531 F-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENF-----NPFAR---EGSGEGTGWSFL 601 (662)
Q Consensus 531 ~-~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~-----~~~~~---~~~~~~~G~l~~ 601 (662)
+ ..+++.++|+.||++|+||.+|+||++++||||||+|||+++.+|++|++.+- ...+- .+.+.++||+++
T Consensus 211 ~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~ 290 (335)
T PHA01633 211 HNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIH 290 (335)
T ss_pred CCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeec
Confidence 5 35667799999999999999999999999999999999999999999975530 00000 111245799999
Q ss_pred CCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 006091 602 PLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQ 649 (662)
Q Consensus 602 ~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~ 649 (662)
..|+++++++|..++... +++++ .+..+...+.|+|++++++|++
T Consensus 291 ~~d~~~la~ai~~~~~~~--~~~~~-~~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 291 KFQIEDMANAIILAFELQ--DREER-SMKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred CCCHHHHHHHHHHHHhcc--Chhhh-hHHHHHHHHhcCHHHHHHHhhC
Confidence 999999999999987642 44433 2222346789999999999863
No 69
>PHA01630 putative group 1 glycosyl transferase
Probab=99.95 E-value=8.2e-27 Score=247.88 Aligned_cols=218 Identities=17% Similarity=0.146 Sum_probs=162.2
Q ss_pred HHHH-HHhcCEEEecCcchhhhhhcccCCcchhhhhccC-CCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhH
Q 006091 376 LKGA-IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSR-KSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCK 453 (662)
Q Consensus 376 ~k~~-~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~-~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k 453 (662)
+... ...+|.++++|+..++.+... +.. ..++.+||||||.+.|.+....
T Consensus 87 ~~~~~~~~ad~ii~~S~~~~~~l~~~----------g~~~~~~i~vIpNGVd~~~f~~~~~~------------------ 138 (331)
T PHA01630 87 LYFFRNQPVDEIVVPSQWSKNAFYTS----------GLKIPQPIYVIPHNLNPRMFEYKPKE------------------ 138 (331)
T ss_pred HHHHhhccCCEEEECCHHHHHHHHHc----------CCCCCCCEEEECCCCCHHHcCCCccc------------------
Confidence 3444 468999999999999877531 122 3589999999998877654311
Q ss_pred HHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCC
Q 006091 454 IALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF 531 (662)
Q Consensus 454 ~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~ 531 (662)
. .+..+++++|++.++||++.|++|++.+.+ ++++++++|++.... . +. .. ..+.+.+
T Consensus 139 ---------~--~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~~~-~----l~-~~-~~~~~~v-- 198 (331)
T PHA01630 139 ---------K--PHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNMLDP-R----LF-GL-NGVKTPL-- 198 (331)
T ss_pred ---------c--CCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCcccch-h----hc-cc-cceeccC--
Confidence 0 234577788899999999999999999875 489999999764211 1 11 11 1122223
Q ss_pred ChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECC---------
Q 006091 532 NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLP--------- 602 (662)
Q Consensus 532 ~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~--------- 602 (662)
+.+++..+|+.||++++||.+|+||++++||||||+|||+|+.||+.|++.+ +.+|++++.
T Consensus 199 ~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~----------~~ng~lv~~~~~~~~~~~ 268 (331)
T PHA01630 199 PDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLS----------NLDVYWIKSGRKPKLWYT 268 (331)
T ss_pred CHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccC----------CCceEEeeeccccccccc
Confidence 4466779999999999999999999999999999999999999999999988 667666542
Q ss_pred ----------CCHHHHHHHHHHHHHHhhhC-HHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHH
Q 006091 603 ----------LSEESMLTALRFAIRTYREH-KSSWEGLMRRG--MEKDYTWENAAIQYEQVFEW 653 (662)
Q Consensus 603 ----------~d~~~la~aI~~~l~~~~~~-~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy~~ 653 (662)
.|.+++++++.+++.+. + ++.++.+..++ +.++|||++++++|+++|++
T Consensus 269 ~~~~~G~~v~~~~~~~~~~ii~~l~~~--~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 269 NPIHVGYFLDPDIEDAYQKLLEALANW--TPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred CCcccccccCCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 37788888888887621 2 33333344333 57899999999999999974
No 70
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.94 E-value=1.1e-24 Score=234.74 Aligned_cols=343 Identities=14% Similarity=0.008 Sum_probs=225.3
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEE
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFH 230 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 230 (662)
+|||++++.. .||...++.+|+++|.++||+|.+++....... . .
T Consensus 1 ~~~i~i~~~g------~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~------~-----------------------~ 45 (357)
T PRK00726 1 MKKILLAGGG------TGGHVFPALALAEELKKRGWEVLYLGTARGMEA------R-----------------------L 45 (357)
T ss_pred CcEEEEEcCc------chHhhhHHHHHHHHHHhCCCEEEEEECCCchhh------h-----------------------c
Confidence 3899988753 588888999999999999999999986531100 0 0
Q ss_pred EeeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHh
Q 006091 231 EYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 310 (662)
Q Consensus 231 ~~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~ 310 (662)
....|++++.++.+....... .. ...+...+......+.+.++ ..+|||||+|.+...+.+.+..
T Consensus 46 ~~~~g~~~~~~~~~~~~~~~~-~~-----~l~~~~~~~~~~~~~~~~ik--------~~~pDvv~~~~~~~~~~~~~~~- 110 (357)
T PRK00726 46 VPKAGIEFHFIPSGGLRRKGS-LA-----NLKAPFKLLKGVLQARKILK--------RFKPDVVVGFGGYVSGPGGLAA- 110 (357)
T ss_pred cccCCCcEEEEeccCcCCCCh-HH-----HHHHHHHHHHHHHHHHHHHH--------hcCCCEEEECCCcchhHHHHHH-
Confidence 011477888776543221100 00 00011111111122222222 2269999999877766555444
Q ss_pred hcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecC
Q 006091 311 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 390 (662)
Q Consensus 311 ~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS 390 (662)
+. .++|+|++.|+.. +. ...+..+..+|.+++++
T Consensus 111 ~~------~~~p~v~~~~~~~-----~~-----------------------------------~~~r~~~~~~d~ii~~~ 144 (357)
T PRK00726 111 RL------LGIPLVIHEQNAV-----PG-----------------------------------LANKLLARFAKKVATAF 144 (357)
T ss_pred HH------cCCCEEEEcCCCC-----cc-----------------------------------HHHHHHHHHhchheECc
Confidence 33 5799998777421 00 01233456789999887
Q ss_pred cchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCE
Q 006091 391 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 470 (662)
Q Consensus 391 ~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~ 470 (662)
+.... + .+..++.+|+||+|...+.+.. .+++++++ ++.++
T Consensus 145 ~~~~~------------~---~~~~~i~vi~n~v~~~~~~~~~----------------------~~~~~~~~--~~~~~ 185 (357)
T PRK00726 145 PGAFP------------E---FFKPKAVVTGNPVREEILALAA----------------------PPARLAGR--EGKPT 185 (357)
T ss_pred hhhhh------------c---cCCCCEEEECCCCChHhhcccc----------------------hhhhccCC--CCCeE
Confidence 63211 1 3567899999999976554321 11234554 56778
Q ss_pred EEEEecCCCccCHHHHH-HHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEEEc
Q 006091 471 IGFIGRLDYQKGIDLIR-LAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMP 549 (662)
Q Consensus 471 Il~vGrl~~~Kg~d~Ll-~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~P 549 (662)
|+++|+....|++..++ +|++++......++++|+|+ .+...+.+. ...+ +.+.++. +....+|+.||+++++
T Consensus 186 i~~~gg~~~~~~~~~~l~~a~~~~~~~~~~~~~~G~g~--~~~~~~~~~--~~~~-v~~~g~~-~~~~~~~~~~d~~i~~ 259 (357)
T PRK00726 186 LLVVGGSQGARVLNEAVPEALALLPEALQVIHQTGKGD--LEEVRAAYA--AGIN-AEVVPFI-DDMAAAYAAADLVICR 259 (357)
T ss_pred EEEECCcHhHHHHHHHHHHHHHHhhhCcEEEEEcCCCc--HHHHHHHhh--cCCc-EEEeehH-hhHHHHHHhCCEEEEC
Confidence 89999988888875555 99988854335577789986 344444442 3323 3344444 3456899999999987
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEeCCcc--------cccccccccccccCCCCccceEEECCCC--HHHHHHHHHHHHHHh
Q 006091 550 SRFEPCGLNQLYAMRYGTIPVVHATGG--------LRDTVENFNPFAREGSGEGTGWSFLPLS--EESMLTALRFAIRTY 619 (662)
Q Consensus 550 S~~E~fgl~~lEAma~G~PvVas~~gg--------~~eii~~~~~~~~~~~~~~~G~l~~~~d--~~~la~aI~~~l~~~ 619 (662)
+- +.+++|||++|+|+|++..++ ..+.+.+ .++|+++++.| +++++++|.+++.
T Consensus 260 ~g----~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~----------~~~g~~~~~~~~~~~~l~~~i~~ll~-- 323 (357)
T PRK00726 260 AG----ASTVAELAAAGLPAILVPLPHAADDHQTANARALVD----------AGAALLIPQSDLTPEKLAEKLLELLS-- 323 (357)
T ss_pred CC----HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHH----------CCCEEEEEcccCCHHHHHHHHHHHHc--
Confidence 62 689999999999999987643 2355666 67999998887 9999999999887
Q ss_pred hhCHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHH
Q 006091 620 REHKSSWEGLMRRGM--EKDYTWENAAIQYEQVFE 652 (662)
Q Consensus 620 ~~~~~~~~~l~~~~~--~~~fs~e~~a~~~~~iy~ 652 (662)
|++.+++|++++. .+.++.+++++.++++.+
T Consensus 324 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 324 --DPERLEAMAEAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred --CHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence 7888899998873 577889999988887654
No 71
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.94 E-value=2.2e-25 Score=241.17 Aligned_cols=213 Identities=15% Similarity=0.150 Sum_probs=169.2
Q ss_pred HHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHH
Q 006091 380 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 459 (662)
Q Consensus 380 ~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~ 459 (662)
+..+|.++++|+..++.+.. .++. ..++.+||||++...+.+....
T Consensus 155 ~~~~d~ii~~s~~~~~~l~~---------~~~~-~~~v~~ip~g~~~~~~~~~~~~------------------------ 200 (372)
T cd04949 155 LDKVDGVIVATEQQKQDLQK---------QFGN-YNPIYTIPVGSIDPLKLPAQFK------------------------ 200 (372)
T ss_pred hhhCCEEEEccHHHHHHHHH---------HhCC-CCceEEEcccccChhhcccchh------------------------
Confidence 56889999999988877752 2222 2348999999997765543100
Q ss_pred hCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHH
Q 006091 460 LGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISH 537 (662)
Q Consensus 460 lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 537 (662)
. .....|+++||+.+.||++.+++|+..+.+ ++++|+|+|.|+. ...+............+.+.|+.++ +.
T Consensus 201 ---~--~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~-~~~~~~~~~~~~~~~~v~~~g~~~~-~~ 273 (372)
T cd04949 201 ---Q--RKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDE-EEKLKELIEELGLEDYVFLKGYTRD-LD 273 (372)
T ss_pred ---h--cCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCch-HHHHHHHHHHcCCcceEEEcCCCCC-HH
Confidence 0 345789999999999999999999999865 5899999999963 2222222222222234445555443 66
Q ss_pred HHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCc-ccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHH
Q 006091 538 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG-GLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAI 616 (662)
Q Consensus 538 ~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~g-g~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l 616 (662)
++|+.||++++||..|+||++++|||++|+|||+++.+ |..+++.+ +.+|+++++.|+++++++|..++
T Consensus 274 ~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~----------~~~G~lv~~~d~~~la~~i~~ll 343 (372)
T cd04949 274 EVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIED----------GENGYLVPKGDIEALAEAIIELL 343 (372)
T ss_pred HHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHccc----------CCCceEeCCCcHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999987 89999998 89999999999999999999998
Q ss_pred HHhhhCHHHHHHHHHHHH--HhcCCHHHHHHHH
Q 006091 617 RTYREHKSSWEGLMRRGM--EKDYTWENAAIQY 647 (662)
Q Consensus 617 ~~~~~~~~~~~~l~~~~~--~~~fs~e~~a~~~ 647 (662)
. +++.+.++++++. .++|+|++++++|
T Consensus 344 ~----~~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 344 N----DPKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred c----CHHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 7 8888999998883 5799999999875
No 72
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.93 E-value=1.2e-24 Score=241.71 Aligned_cols=293 Identities=17% Similarity=0.174 Sum_probs=195.8
Q ss_pred CccEEEeCCCCcchHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCc
Q 006091 290 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT 369 (662)
Q Consensus 290 ~pDVVh~h~~~~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 369 (662)
..|+||+|+++..++|.+++.+. .++|+++++|.. ||.... +..+.+
T Consensus 131 ~~d~iwihDyhl~llp~~lr~~~------~~~~i~~f~Hip-----fP~~e~---------~~~lp~------------- 177 (460)
T cd03788 131 PGDLVWVHDYHLLLLPQMLRERG------PDARIGFFLHIP-----FPSSEI---------FRCLPW------------- 177 (460)
T ss_pred CCCEEEEeChhhhHHHHHHHhhC------CCCeEEEEEeCC-----CCChHH---------HhhCCC-------------
Confidence 45999999999999999998765 678999999965 222221 111000
Q ss_pred chhhhHHHHHHHhcCEEEecCcchhhhhhccc-CCcch------hhhhccCCCceeEecCCCCCCCCCCCCchhhcccCc
Q 006091 370 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVE-GGYGL------HEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYS 442 (662)
Q Consensus 370 ~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~-~~~~l------~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~ 442 (662)
+..++ ..+..+|.|.+-+..+.+.+.+.- .--++ .-.+.....++.+||||||++.|.+....
T Consensus 178 --~~~ll-~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~------- 247 (460)
T cd03788 178 --REELL-RGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAAS------- 247 (460)
T ss_pred --hHHHH-HHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcC-------
Confidence 01222 233457777777655544332110 00000 00011234578999999998887643211
Q ss_pred ccccchhHHhHHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--CC----eEEEEEeCCC----hhhHH
Q 006091 443 IDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DD----IQFVMLGSGD----PQFES 512 (662)
Q Consensus 443 ~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d----~~lvivG~g~----~~~~~ 512 (662)
...+..+++..+.. +++++|+++||+++.||++.+++|++.+.+ ++ ++|+++|.+. +.+..
T Consensus 248 -------~~~~~~~~~~~~~~--~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~ 318 (460)
T cd03788 248 -------PEVQERAAELRERL--GGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQE 318 (460)
T ss_pred -------chhHHHHHHHHHhc--CCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHH
Confidence 01122233334433 577899999999999999999999998865 33 6788887532 23333
Q ss_pred HHHHHHh---hcC--------CcEEEEcCC-ChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCc----EEEeCCcc
Q 006091 513 WMRDTEA---TYK--------DKYRGWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTI----PVVHATGG 576 (662)
Q Consensus 513 ~~~~l~~---~~~--------~~~~~~~~~-~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~P----vVas~~gg 576 (662)
+.+.+.. ..+ ..+..+.+. +.+++.++|+.||++++||..|+||++++||||||+| +|+|+.+|
T Consensus 319 l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G 398 (460)
T cd03788 319 LRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAG 398 (460)
T ss_pred HHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEecccc
Confidence 3333322 111 123333333 5667789999999999999999999999999999999 99999888
Q ss_pred cccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HHhcCCHHHHHHHHHHH
Q 006091 577 LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQV 650 (662)
Q Consensus 577 ~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~i 650 (662)
..+.. .+|+++++.|+++++++|.++++. ++++++.+++++ ...+|+++..++++++-
T Consensus 399 ~~~~~-------------~~g~lv~p~d~~~la~ai~~~l~~---~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~ 458 (460)
T cd03788 399 AAEEL-------------SGALLVNPYDIDEVADAIHRALTM---PLEERRERHRKLREYVRTHDVQAWANSFLDD 458 (460)
T ss_pred chhhc-------------CCCEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 87662 479999999999999999999873 445556665554 35789999999998753
No 73
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.93 E-value=7.5e-24 Score=233.83 Aligned_cols=291 Identities=16% Similarity=0.166 Sum_probs=201.2
Q ss_pred ccEEEeCCCCcchHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcc
Q 006091 291 KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTG 370 (662)
Q Consensus 291 pDVVh~h~~~~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 370 (662)
-|+|++||++..++|.+++.+. +..++.+.+|.. ||... .+..+-|
T Consensus 128 ~d~vwvhDYhl~l~p~~lr~~~------~~~~igfFlHip-----fP~~e---------~f~~lp~-------------- 173 (456)
T TIGR02400 128 GDIVWVHDYHLMLLPAMLRELG------VQNKIGFFLHIP-----FPSSE---------IYRTLPW-------------- 173 (456)
T ss_pred CCEEEEecchhhHHHHHHHhhC------CCCeEEEEEeCC-----CCChH---------HHhhCCc--------------
Confidence 4899999999999999999876 678999999965 23222 2211111
Q ss_pred hhhhHHHHHHHhcCEEEecCcchhhhhhccc---CC-----cchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCc
Q 006091 371 EAVNVLKGAIVTADRLLTVSKGYSWEITTVE---GG-----YGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYS 442 (662)
Q Consensus 371 ~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~---~~-----~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~ 442 (662)
..-+-..+-.+|.|-+-+..+.+.+...- .+ .++ .+..+..++.++|||||++.|.+....
T Consensus 174 --r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~--~~~g~~~~v~viP~GID~~~f~~~~~~------- 242 (456)
T TIGR02400 174 --RRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGV--ESGGRTVRVGAFPIGIDVDRFAEQAKK------- 242 (456)
T ss_pred --HHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCce--EECCcEEEEEEecCcCCHHHHHHHhcC-------
Confidence 11233456689999998888876554310 00 001 012355679999999999988643211
Q ss_pred ccccchhHHhHHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--C----CeEEEEEeCC----ChhhHH
Q 006091 443 IDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D----DIQFVMLGSG----DPQFES 512 (662)
Q Consensus 443 ~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~----d~~lvivG~g----~~~~~~ 512 (662)
.........++++++ ++++|+++||+++.||++.+++|++.+.+ + ++.|+++|.. .+.+..
T Consensus 243 ----~~~~~~~~~lr~~~~-----~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~ 313 (456)
T TIGR02400 243 ----PSVQKRIAELRESLK-----GRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQ 313 (456)
T ss_pred ----hhHHHHHHHHHHHcC-----CCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHHH
Confidence 000111124566653 56899999999999999999999999864 3 3668877521 134444
Q ss_pred HHHHHHhh---cC-----Cc---EEEEc-CCChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCc----EEEeCCcc
Q 006091 513 WMRDTEAT---YK-----DK---YRGWV-GFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTI----PVVHATGG 576 (662)
Q Consensus 513 ~~~~l~~~---~~-----~~---~~~~~-~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~P----vVas~~gg 576 (662)
+.+.+.+. .+ .. +..+. ..+.+++.++|+.||++++||..||||++++||||||+| +|+|+.+|
T Consensus 314 l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G 393 (456)
T TIGR02400 314 LRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAG 393 (456)
T ss_pred HHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCC
Confidence 44444332 11 11 12122 225677789999999999999999999999999999999 99999999
Q ss_pred cccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHH
Q 006091 577 LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVF 651 (662)
Q Consensus 577 ~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy 651 (662)
..+.+. +|++++|.|+++++++|.++++. +++++.++.++. ....||+...+++|++-.
T Consensus 394 ~~~~l~-------------~gllVnP~d~~~lA~aI~~aL~~---~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 454 (456)
T TIGR02400 394 AAQELN-------------GALLVNPYDIDGMADAIARALTM---PLEEREERHRAMMDKLRKNDVQRWREDFLSDL 454 (456)
T ss_pred ChHHhC-------------CcEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 888772 68999999999999999999874 444455544443 346799999999988643
No 74
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.92 E-value=2.8e-23 Score=222.61 Aligned_cols=323 Identities=13% Similarity=0.054 Sum_probs=200.4
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEE
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 231 (662)
|||++++.+ .||-......|+++|.++||+|+|++....... . ..
T Consensus 1 ~~i~~~~g~------~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~----~-------------------------~~ 45 (348)
T TIGR01133 1 KKVVLAAGG------TGGHIFPALAVAEELIKRGVEVLWLGTKRGLEK----R-------------------------LV 45 (348)
T ss_pred CeEEEEeCc------cHHHHhHHHHHHHHHHhCCCEEEEEeCCCcchh----c-------------------------cc
Confidence 789988754 244444556999999999999999985421100 0 00
Q ss_pred eeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHhh
Q 006091 232 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 311 (662)
Q Consensus 232 ~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~ 311 (662)
...|++++.++...+.+. .... ...+...+......+.+.++ ..+||+||+|.....+.+.+++..
T Consensus 46 ~~~g~~~~~i~~~~~~~~-~~~~-----~l~~~~~~~~~~~~l~~~i~--------~~~pDvVi~~~~~~~~~~~~~~~~ 111 (348)
T TIGR01133 46 PKAGIEFYFIPVGGLRRK-GSFR-----LIKTPLKLLKAVFQARRILK--------KFKPDAVIGFGGYVSGPAGLAAKL 111 (348)
T ss_pred ccCCCceEEEeccCcCCC-ChHH-----HHHHHHHHHHHHHHHHHHHH--------hcCCCEEEEcCCcccHHHHHHHHH
Confidence 114777777764332211 0100 00111111111122222222 227999999976665554444433
Q ss_pred cCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCc
Q 006091 312 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 391 (662)
Q Consensus 312 ~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~ 391 (662)
.++|+|++.|+.. + .+ ..+...+.+|.++++|+
T Consensus 112 -------~~~p~v~~~~~~~-----~-----------~~------------------------~~~~~~~~~d~ii~~~~ 144 (348)
T TIGR01133 112 -------LGIPLFHHEQNAV-----P-----------GL------------------------TNKLLSRFAKKVLISFP 144 (348)
T ss_pred -------cCCCEEEECCCCC-----c-----------cH------------------------HHHHHHHHhCeeEECch
Confidence 4688875443210 0 00 12334568999999998
Q ss_pred chhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEE
Q 006091 392 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 471 (662)
Q Consensus 392 ~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~I 471 (662)
...+.+ +..+|+||+|...+.+.. .+++++++ ++.++|
T Consensus 145 ~~~~~~------------------~~~~i~n~v~~~~~~~~~----------------------~~~~~~~~--~~~~~i 182 (348)
T TIGR01133 145 GAKDHF------------------EAVLVGNPVRQEIRSLPV----------------------PRERFGLR--EGKPTI 182 (348)
T ss_pred hHhhcC------------------CceEEcCCcCHHHhcccc----------------------hhhhcCCC--CCCeEE
Confidence 765432 237899999866543221 12345666 577899
Q ss_pred EEEecCCCccCHHH-HHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEEEcC
Q 006091 472 GFIGRLDYQKGIDL-IRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPS 550 (662)
Q Consensus 472 l~vGrl~~~Kg~d~-Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~PS 550 (662)
+++|+....|++.. +++|++.+.+.++++++++++. ..+.+.+.+......+.+.+. .. .+..+|+.||+++.++
T Consensus 183 ~~~gg~~~~~~~~~~l~~a~~~l~~~~~~~~~~~g~~-~~~~l~~~~~~~~l~~~v~~~--~~-~~~~~l~~ad~~v~~~ 258 (348)
T TIGR01133 183 LVLGGSQGAKILNELVPKALAKLAEKGIQIVHQTGKN-DLEKVKNVYQELGIEAIVTFI--DE-NMAAAYAAADLVISRA 258 (348)
T ss_pred EEECCchhHHHHHHHHHHHHHHHhhcCcEEEEECCcc-hHHHHHHHHhhCCceEEecCc--cc-CHHHHHHhCCEEEECC
Confidence 99998888888654 5688888866567775544332 223333333332222333343 22 4568999999999875
Q ss_pred CCCCCcHHHHHHHHcCCcEEEeCCccc-------ccccccccccccCCCCccceEEECCCC--HHHHHHHHHHHHHHhhh
Q 006091 551 RFEPCGLNQLYAMRYGTIPVVHATGGL-------RDTVENFNPFAREGSGEGTGWSFLPLS--EESMLTALRFAIRTYRE 621 (662)
Q Consensus 551 ~~E~fgl~~lEAma~G~PvVas~~gg~-------~eii~~~~~~~~~~~~~~~G~l~~~~d--~~~la~aI~~~l~~~~~ 621 (662)
+ +++++|||++|+|+|+++.++. .+++.+ +++|+++++.| +++++++|.+++.
T Consensus 259 ---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~----------~~~G~~~~~~~~~~~~l~~~i~~ll~---- 320 (348)
T TIGR01133 259 ---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED----------LGAGLVIRQKELLPEKLLEALLKLLL---- 320 (348)
T ss_pred ---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH----------CCCEEEEecccCCHHHHHHHHHHHHc----
Confidence 3 7899999999999999976542 346766 78999998876 9999999999886
Q ss_pred CHHHHHHHHHHHH
Q 006091 622 HKSSWEGLMRRGM 634 (662)
Q Consensus 622 ~~~~~~~l~~~~~ 634 (662)
|++.+.+|++++.
T Consensus 321 ~~~~~~~~~~~~~ 333 (348)
T TIGR01133 321 DPANLEAMAEAAR 333 (348)
T ss_pred CHHHHHHHHHHHH
Confidence 8888999988773
No 75
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.92 E-value=4.8e-23 Score=220.97 Aligned_cols=331 Identities=15% Similarity=0.041 Sum_probs=212.5
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEe
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 232 (662)
||++.+.. .||-.+++..++++|.++||+|+|+|........ ...
T Consensus 1 ~~~~~~~~------~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~~-----------------------------~~~ 45 (350)
T cd03785 1 RILIAGGG------TGGHIFPALALAEELRERGAEVLFLGTKRGLEAR-----------------------------LVP 45 (350)
T ss_pred CEEEEecC------chhhhhHHHHHHHHHHhCCCEEEEEECCCcchhh-----------------------------ccc
Confidence 46666653 6888889999999999999999999876321100 001
Q ss_pred eCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHH---HHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHH
Q 006091 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCY---AACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 309 (662)
Q Consensus 233 ~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~---a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~ 309 (662)
..+++++.++...+.+.. .+ .....+..+.. .+.+.++. .+||+||+|.....+...+++
T Consensus 46 ~~~~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~i~~--------~~pDvI~~~~~~~~~~~~~~a 108 (350)
T cd03785 46 KAGIPLHTIPVGGLRRKG-SL--------KKLKAPFKLLKGVLQARKILKK--------FKPDVVVGFGGYVSGPVGLAA 108 (350)
T ss_pred ccCCceEEEEecCcCCCC-hH--------HHHHHHHHHHHHHHHHHHHHHh--------cCCCEEEECCCCcchHHHHHH
Confidence 136777777654322110 01 11111111111 22222222 279999999866554444444
Q ss_pred hhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEec
Q 006091 310 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 389 (662)
Q Consensus 310 ~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~v 389 (662)
.. .++|++++.|+.. +. . ..+.....+|.++++
T Consensus 109 ~~-------~~~p~v~~~~~~~-----~~-----------~------------------------~~~~~~~~~~~vi~~ 141 (350)
T cd03785 109 KL-------LGIPLVIHEQNAV-----PG-----------L------------------------ANRLLARFADRVALS 141 (350)
T ss_pred HH-------hCCCEEEEcCCCC-----cc-----------H------------------------HHHHHHHhhCEEEEc
Confidence 33 5789987665421 00 0 112234568999999
Q ss_pred CcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCC
Q 006091 390 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP 469 (662)
Q Consensus 390 S~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~ 469 (662)
|+...+. .+..++.+|+||+|...+.+.. . +++++++ ++.+
T Consensus 142 s~~~~~~---------------~~~~~~~~i~n~v~~~~~~~~~---------------------~-~~~~~~~--~~~~ 182 (350)
T cd03785 142 FPETAKY---------------FPKDKAVVTGNPVREEILALDR---------------------E-RARLGLR--PGKP 182 (350)
T ss_pred chhhhhc---------------CCCCcEEEECCCCchHHhhhhh---------------------h-HHhcCCC--CCCe
Confidence 9876543 2356899999999976554311 1 5666766 6677
Q ss_pred EEEEEecCCCccCHH-HHHHHHHhccCCCeEE-EEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEE
Q 006091 470 LIGFIGRLDYQKGID-LIRLAAPEILADDIQF-VMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILL 547 (662)
Q Consensus 470 ~Il~vGrl~~~Kg~d-~Ll~A~~~l~~~d~~l-vivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v 547 (662)
+|+++|+....|+.. .++++++.+.++++++ +++|+|. .+.+.+.+.+. ..+ +.+.++. +.+..+|+.||+++
T Consensus 183 ~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~--~~~l~~~~~~~-~~~-v~~~g~~-~~~~~~l~~ad~~v 257 (350)
T cd03785 183 TLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGD--LEEVKKAYEEL-GVN-YEVFPFI-DDMAAAYAAADLVI 257 (350)
T ss_pred EEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCcc--HHHHHHHHhcc-CCC-eEEeehh-hhHHHHHHhcCEEE
Confidence 888888777777765 4568888886556764 4678873 34444443332 222 2344444 34568999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCcEEEeCCcc--------cccccccccccccCCCCccceEEECCC--CHHHHHHHHHHHHH
Q 006091 548 MPSRFEPCGLNQLYAMRYGTIPVVHATGG--------LRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIR 617 (662)
Q Consensus 548 ~PS~~E~fgl~~lEAma~G~PvVas~~gg--------~~eii~~~~~~~~~~~~~~~G~l~~~~--d~~~la~aI~~~l~ 617 (662)
.++- +++++|||++|+|+|+++.++ ..+.+.+ .++|+++++. |+++++++|.+++.
T Consensus 258 ~~sg----~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~----------~g~g~~v~~~~~~~~~l~~~i~~ll~ 323 (350)
T cd03785 258 SRAG----ASTVAELAALGLPAILIPLPYAADDHQTANARALVK----------AGAAVLIPQEELTPERLAAALLELLS 323 (350)
T ss_pred ECCC----HhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHh----------CCCEEEEecCCCCHHHHHHHHHHHhc
Confidence 8762 689999999999999987654 2456666 6899999886 89999999998886
Q ss_pred HhhhCHHHHHHHHHHHH--HhcCCHHHHH
Q 006091 618 TYREHKSSWEGLMRRGM--EKDYTWENAA 644 (662)
Q Consensus 618 ~~~~~~~~~~~l~~~~~--~~~fs~e~~a 644 (662)
+++.+++|+.++. .+.+.-++++
T Consensus 324 ----~~~~~~~~~~~~~~~~~~~~~~~i~ 348 (350)
T cd03785 324 ----DPERLKAMAEAARSLARPDAAERIA 348 (350)
T ss_pred ----CHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 7888888888874 3455555554
No 76
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.90 E-value=3.3e-22 Score=233.74 Aligned_cols=297 Identities=15% Similarity=0.161 Sum_probs=202.5
Q ss_pred ccEEEeCCCCcchHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcc
Q 006091 291 KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTG 370 (662)
Q Consensus 291 pDVVh~h~~~~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 370 (662)
-|+|.+||+|..++|.+++.+. +++++.+.+|.. ||.... +..+.|
T Consensus 148 ~d~vWvhDYhL~llp~~lR~~~------~~~~igfFlHiP-----FPs~e~---------fr~lp~-------------- 193 (797)
T PLN03063 148 GDVVWCHDYHLMFLPQYLKEYN------NKMKVGWFLHTP-----FPSSEI---------YKTLPS-------------- 193 (797)
T ss_pred CCEEEEecchhhhHHHHHHHhC------CCCcEEEEecCC-----CCCHHH---------HhhCCC--------------
Confidence 4899999999999999999876 789999999976 233222 211111
Q ss_pred hhhhHHHHHHHhcCEEEecCcchhhhhhccc----C----CcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCc
Q 006091 371 EAVNVLKGAIVTADRLLTVSKGYSWEITTVE----G----GYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYS 442 (662)
Q Consensus 371 ~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~----~----~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~ 442 (662)
+..+ -..+-.+|.|-+.+..+.+.+.+.- + ..++ .+.....++.++|||||+..|.+....
T Consensus 194 -r~~i-l~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i--~~~gr~~~I~viP~GID~~~f~~~~~~------- 262 (797)
T PLN03063 194 -RSEL-LRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGV--VDQGKVTRVAVFPIGIDPERFINTCEL------- 262 (797)
T ss_pred -HHHH-HHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCce--EECCeEEEEEEEecccCHHHHHHHhcC-------
Confidence 0112 2344577888887777765544210 0 0000 012234578999999998877543210
Q ss_pred ccccchhHHhHHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--CC----eEEEEEeCC----ChhhHH
Q 006091 443 IDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DD----IQFVMLGSG----DPQFES 512 (662)
Q Consensus 443 ~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d----~~lvivG~g----~~~~~~ 512 (662)
.+.......+++.++ ++++|+++||+++.||++.+++|++.+.+ ++ +.|++++.. .+.+..
T Consensus 263 ----~~~~~~~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~ 333 (797)
T PLN03063 263 ----PEVKQHMKELKRFFA-----GRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQK 333 (797)
T ss_pred ----hhHHHHHHHHHHhcC-----CCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHH
Confidence 000011123444443 56899999999999999999999999864 34 445544321 134444
Q ss_pred HHHHHHhh---cCCcE-----EE--Ec--CCChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCc----EEEeCCcc
Q 006091 513 WMRDTEAT---YKDKY-----RG--WV--GFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTI----PVVHATGG 576 (662)
Q Consensus 513 ~~~~l~~~---~~~~~-----~~--~~--~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~P----vVas~~gg 576 (662)
+.+.+.+. .+.++ .+ ++ ..+.+++.++|+.||++|+||..||+|++++||||||+| +|+|+.+|
T Consensus 334 l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G 413 (797)
T PLN03063 334 LKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAG 413 (797)
T ss_pred HHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcC
Confidence 44444332 22221 11 11 125567779999999999999999999999999999999 99999999
Q ss_pred cccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHh
Q 006091 577 LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWA 654 (662)
Q Consensus 577 ~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy~~~ 654 (662)
..+.+. .+|++++|.|++++|++|..+++. ++++++++.++. ....++|...++.+++.++++
T Consensus 414 ~~~~l~------------~~allVnP~D~~~lA~AI~~aL~m---~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~ 478 (797)
T PLN03063 414 AGQSLG------------AGALLVNPWNITEVSSAIKEALNM---SDEERETRHRHNFQYVKTHSAQKWADDFMSELNDI 478 (797)
T ss_pred chhhhc------------CCeEEECCCCHHHHHHHHHHHHhC---CHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHH
Confidence 988763 479999999999999999999974 445555444443 467899999999999988877
Q ss_pred hh
Q 006091 655 SI 656 (662)
Q Consensus 655 ~~ 656 (662)
..
T Consensus 479 ~~ 480 (797)
T PLN03063 479 IV 480 (797)
T ss_pred hh
Confidence 64
No 77
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.89 E-value=1.1e-20 Score=205.39 Aligned_cols=219 Identities=10% Similarity=0.076 Sum_probs=151.3
Q ss_pred HhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHh
Q 006091 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKEL 460 (662)
Q Consensus 381 ~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~l 460 (662)
+.+|.++++|+...+.+.. .+.+++++.++.|.++.. |.+... +..+++++
T Consensus 146 ~~ad~i~~~s~~~~~~l~~----------~gi~~~ki~v~G~p~~~~-f~~~~~------------------~~~~~~~~ 196 (380)
T PRK13609 146 REVDRYFVATDHVKKVLVD----------IGVPPEQVVETGIPIRSS-FELKIN------------------PDIIYNKY 196 (380)
T ss_pred CCCCEEEECCHHHHHHHHH----------cCCChhHEEEECcccChH-HcCcCC------------------HHHHHHHc
Confidence 4789999999998877752 234567888876666432 221111 23468888
Q ss_pred CCCCCCCCC-EEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHH
Q 006091 461 GLPIRPDCP-LIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRI 539 (662)
Q Consensus 461 gl~~~~~~~-~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 539 (662)
+++ ++++ ++++.|++...|+++.+++++.+. ++++++++|++++...+.++........++ .+.|+.++ +.++
T Consensus 197 ~l~--~~~~~il~~~G~~~~~k~~~~li~~l~~~--~~~~~viv~G~~~~~~~~l~~~~~~~~~~v-~~~g~~~~-~~~l 270 (380)
T PRK13609 197 QLC--PNKKILLIMAGAHGVLGNVKELCQSLMSV--PDLQVVVVCGKNEALKQSLEDLQETNPDAL-KVFGYVEN-IDEL 270 (380)
T ss_pred CCC--CCCcEEEEEcCCCCCCcCHHHHHHHHhhC--CCcEEEEEeCCCHHHHHHHHHHHhcCCCcE-EEEechhh-HHHH
Confidence 887 5555 455668888899999999998654 579998875533333333333333222222 23454433 5689
Q ss_pred HHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeC-Ccccc----cccccccccccCCCCccceEEECCCCHHHHHHHHHH
Q 006091 540 TAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA-TGGLR----DTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRF 614 (662)
Q Consensus 540 l~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~-~gg~~----eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~ 614 (662)
|+.||+++. ++.|++++|||+||+|+|+++ .+|.. +.+.+ +|+.+...|+++++++|.+
T Consensus 271 ~~~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~------------~G~~~~~~~~~~l~~~i~~ 334 (380)
T PRK13609 271 FRVTSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER------------KGAAVVIRDDEEVFAKTEA 334 (380)
T ss_pred HHhccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh------------CCcEEEECCHHHHHHHHHH
Confidence 999999884 456999999999999999976 55432 22322 4555556789999999998
Q ss_pred HHHHhhhCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHh
Q 006091 615 AIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWA 654 (662)
Q Consensus 615 ~l~~~~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy~~~ 654 (662)
+++ |++.+++|++++ ....++++++++.+++.+...
T Consensus 335 ll~----~~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 335 LLQ----DDMKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred HHC----CHHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 886 888888998876 346789999999999887653
No 78
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.88 E-value=1.1e-20 Score=208.54 Aligned_cols=236 Identities=14% Similarity=0.077 Sum_probs=162.6
Q ss_pred hHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhH
Q 006091 374 NVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCK 453 (662)
Q Consensus 374 ~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k 453 (662)
.+.+..++.+|.|+++|+..++.+.. ++.+++ +.+++|+ +.+.+.+... ....
T Consensus 170 ~~~r~~~~~~d~ii~~S~~~~~~l~~----------~g~~~~-i~vi~n~-~~d~~~~~~~---------------~~~~ 222 (425)
T PRK05749 170 RFYRLLFKNIDLVLAQSEEDAERFLA----------LGAKNE-VTVTGNL-KFDIEVPPEL---------------AARA 222 (425)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHH----------cCCCCC-cEecccc-cccCCCChhh---------------HHHH
Confidence 35566778899999999999887752 234445 8888885 2222221110 0113
Q ss_pred HHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcC-
Q 006091 454 IALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVG- 530 (662)
Q Consensus 454 ~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~- 530 (662)
..++++++ + +.++|+++|+. .|+.+.+++|++.+.+ ++++|+|+|+|+....+..+.+.+. ......+.+
T Consensus 223 ~~~r~~~~-~---~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~r~~~l~~~~~~~-gl~~~~~~~~ 295 (425)
T PRK05749 223 ATLRRQLA-P---NRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPERFKEVEELLKKA-GLSYVRRSQG 295 (425)
T ss_pred HHHHHHhc-C---CCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChhhHHHHHHHHHhC-CCcEEEccCC
Confidence 45677776 3 56788888864 6889999999998865 6899999999963223444444332 222222221
Q ss_pred ------------CChHHHHHHHHhcCEEEE-cCCCCCCcHHHHHHHHcCCcEEEeC-CcccccccccccccccCCCCccc
Q 006091 531 ------------FNVPISHRITAGCDILLM-PSRFEPCGLNQLYAMRYGTIPVVHA-TGGLRDTVENFNPFAREGSGEGT 596 (662)
Q Consensus 531 ------------~~~~~~~~ll~~aDi~v~-PS~~E~fgl~~lEAma~G~PvVas~-~gg~~eii~~~~~~~~~~~~~~~ 596 (662)
....++..+|+.||++++ +|..|++|.+++|||+||+|||+++ .++..|+++. ...+
T Consensus 296 ~~~~~~~~v~l~~~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~---------~~~~ 366 (425)
T PRK05749 296 EPPSADTDVLLGDTMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFER---------LLQA 366 (425)
T ss_pred CCCCCCCcEEEEecHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHH---------HHHC
Confidence 123456799999999665 6777999999999999999999975 4566676654 0246
Q ss_pred eEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 006091 597 GWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASI 656 (662)
Q Consensus 597 G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy~~~~~ 656 (662)
|+++++.|+++++++|..+++ |++.+++|++++...--+....++++.++++..+.
T Consensus 367 g~~~~~~d~~~La~~l~~ll~----~~~~~~~m~~~a~~~~~~~~~~~~~~~~~l~~~l~ 422 (425)
T PRK05749 367 GAAIQVEDAEDLAKAVTYLLT----DPDARQAYGEAGVAFLKQNQGALQRTLQLLEPYLP 422 (425)
T ss_pred CCeEEECCHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHhcc
Confidence 888888999999999999886 89999999988732111114677778877776554
No 79
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.87 E-value=5.1e-21 Score=223.90 Aligned_cols=297 Identities=19% Similarity=0.222 Sum_probs=194.4
Q ss_pred CccEEEeCCCCcchHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCc
Q 006091 290 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT 369 (662)
Q Consensus 290 ~pDVVh~h~~~~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 369 (662)
.-|+|.+||+|..++|.+++.+. +..++-+.+|.+ ||....-.+ +| |
T Consensus 133 ~~d~vwvhDYhl~l~p~~lr~~~------~~~~igfFlH~p-----fP~~~~f~~-lp-------------~-------- 179 (726)
T PRK14501 133 PGDVVWVHDYQLMLLPAMLRERL------PDARIGFFLHIP-----FPSFEVFRL-LP-------------W-------- 179 (726)
T ss_pred CCCEEEEeCchhhhHHHHHHhhC------CCCcEEEEeeCC-----CCChHHHhh-CC-------------C--------
Confidence 34999999999999999999875 688999999976 232222111 11 0
Q ss_pred chhhhHHHHHHHhcCEEEecCcchhhhhhccc---CC----cchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCc
Q 006091 370 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVE---GG----YGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYS 442 (662)
Q Consensus 370 ~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~---~~----~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~ 442 (662)
..-+-..+..+|.|-+-+..+.+.+.+.- .+ ... -.+..+..++.++|||||++.|.+....
T Consensus 180 ---~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~-~~~~gr~~~v~v~p~GID~~~f~~~~~~------- 248 (726)
T PRK14501 180 ---REEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGE-IRLGGRIVRVDAFPMGIDYDKFHNSAQD------- 248 (726)
T ss_pred ---hHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCe-EEECCEEEEEEEEECeEcHHHHHHHhcC-------
Confidence 01122234566776666666554432210 00 000 0011233468999999999888643211
Q ss_pred ccccchhHHhHHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--C----CeEEEEEeC----CChhhHH
Q 006091 443 IDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D----DIQFVMLGS----GDPQFES 512 (662)
Q Consensus 443 ~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~----d~~lvivG~----g~~~~~~ 512 (662)
.........+++.+ .++++|+++||+++.||+..+++|++.+.+ + +++|+++|. +-+.+.+
T Consensus 249 ----~~~~~~~~~lr~~~-----~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~ 319 (726)
T PRK14501 249 ----PEVQEEIRRLRQDL-----RGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQE 319 (726)
T ss_pred ----chHHHHHHHHHHHc-----CCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHH
Confidence 00001112344443 356799999999999999999999998864 3 378998873 2133444
Q ss_pred HHHHHHhh---cC-----Cc---EEEEcC-CChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCC-----cEEEeCCc
Q 006091 513 WMRDTEAT---YK-----DK---YRGWVG-FNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGT-----IPVVHATG 575 (662)
Q Consensus 513 ~~~~l~~~---~~-----~~---~~~~~~-~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~-----PvVas~~g 575 (662)
+.+.+.+. .+ .. +..+.+ .+.+++..+|+.||++++||..||+|++++||||||+ ||++...|
T Consensus 320 l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G 399 (726)
T PRK14501 320 MKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAG 399 (726)
T ss_pred HHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccc
Confidence 43333321 11 11 222222 3567788999999999999999999999999999954 66666677
Q ss_pred ccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHH
Q 006091 576 GLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEW 653 (662)
Q Consensus 576 g~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy~~ 653 (662)
+..+++ .|++++|.|+++++++|.+++... .+.+.+...++ ...+|||+..+++|++.|++
T Consensus 400 ~~~~l~--------------~~llv~P~d~~~la~ai~~~l~~~---~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~ 462 (726)
T PRK14501 400 AAAELA--------------EALLVNPNDIEGIAAAIKRALEMP---EEEQRERMQAMQERLRRYDVHKWASDFLDELRE 462 (726)
T ss_pred hhHHhC--------------cCeEECCCCHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 777653 389999999999999999998732 22222222222 34689999999999999998
Q ss_pred hhh
Q 006091 654 ASI 656 (662)
Q Consensus 654 ~~~ 656 (662)
+..
T Consensus 463 ~~~ 465 (726)
T PRK14501 463 AAE 465 (726)
T ss_pred HHh
Confidence 754
No 80
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.87 E-value=6.8e-20 Score=198.90 Aligned_cols=222 Identities=16% Similarity=0.176 Sum_probs=154.7
Q ss_pred hHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhH
Q 006091 374 NVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCK 453 (662)
Q Consensus 374 ~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k 453 (662)
.+++.+++.+|.|+++|+.+.+.+.. ...++.+|+||+|.+.|.+.....
T Consensus 145 ~~e~~~~~~ad~vi~~S~~l~~~~~~-------------~~~~i~~i~ngvd~~~f~~~~~~~----------------- 194 (373)
T cd04950 145 EAERRLLKRADLVFTTSPSLYEAKRR-------------LNPNVVLVPNGVDYEHFAAARDPP----------------- 194 (373)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHhh-------------CCCCEEEcccccCHHHhhcccccC-----------------
Confidence 46788899999999999998876642 126799999999998886543210
Q ss_pred HHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCCh
Q 006091 454 IALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNV 533 (662)
Q Consensus 454 ~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 533 (662)
...+.... .++++|+|+|++.+.++++++.++++.. ++++|+|+|.++...+ ...+....++.+.|++ +.
T Consensus 195 ~~~~~~~~----~~~~~i~y~G~l~~~~d~~ll~~la~~~--p~~~~vliG~~~~~~~--~~~~~~~~nV~~~G~~--~~ 264 (373)
T cd04950 195 PPPADLAA----LPRPVIGYYGAIAEWLDLELLEALAKAR--PDWSFVLIGPVDVSID--PSALLRLPNVHYLGPK--PY 264 (373)
T ss_pred CChhHHhc----CCCCEEEEEeccccccCHHHHHHHHHHC--CCCEEEEECCCcCccC--hhHhccCCCEEEeCCC--CH
Confidence 00011111 3578999999999988888777666543 6899999999832111 1122222344444444 45
Q ss_pred HHHHHHHHhcCEEEEcCCC-----CCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHH
Q 006091 534 PISHRITAGCDILLMPSRF-----EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESM 608 (662)
Q Consensus 534 ~~~~~ll~~aDi~v~PS~~-----E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~l 608 (662)
+++..+|+.+|++++|+.. +++|++++||||||+|||+|+.+ +++.. .+.+++ .+.|++++
T Consensus 265 ~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~---~~~~~----------~~~~~~-~~~d~~~~ 330 (373)
T cd04950 265 KELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLP---EVRRY----------EDEVVL-IADDPEEF 330 (373)
T ss_pred HHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcH---HHHhh----------cCcEEE-eCCCHHHH
Confidence 6678999999999999863 36899999999999999999754 45554 333444 45689999
Q ss_pred HHHHHHHHHHhhhCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 006091 609 LTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEW 653 (662)
Q Consensus 609 a~aI~~~l~~~~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy~~ 653 (662)
+++|..++.. ++++...+ ..+ +.+.|||++.++++++.+++
T Consensus 331 ~~ai~~~l~~--~~~~~~~~-~~~-~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 331 VAAIEKALLE--DGPARERR-RLR-LAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHHHHHHHhc--CCchHHHH-HHH-HHHHCCHHHHHHHHHHHHHh
Confidence 9999998652 12222222 222 67889999999999966553
No 81
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.85 E-value=2.1e-20 Score=179.67 Aligned_cols=164 Identities=25% Similarity=0.345 Sum_probs=131.0
Q ss_pred HHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhcc---CCCeEEEEEeCCChhhHHHHHHHHhh--cCCcEEE
Q 006091 453 KIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEIL---ADDIQFVMLGSGDPQFESWMRDTEAT--YKDKYRG 527 (662)
Q Consensus 453 k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~---~~d~~lvivG~g~~~~~~~~~~l~~~--~~~~~~~ 527 (662)
|...+...+.+ .++++|+|+||+.+.||++.+++|+..+. .+++.|+|+|++. +...+...... ...++..
T Consensus 2 ~~~~~~~~~~~--~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~i~~ 77 (172)
T PF00534_consen 2 KDKLREKLKIP--DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGE--YKKELKNLIEKLNLKENIIF 77 (172)
T ss_dssp HHHHHHHTTT---TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCC--HHHHHHHHHHHTTCGTTEEE
T ss_pred hHHHHHHcCCC--CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccc--cccccccccccccccccccc
Confidence 45667777776 67899999999999999999999999986 4699999999765 22223333322 2223332
Q ss_pred EcCCChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHH
Q 006091 528 WVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEES 607 (662)
Q Consensus 528 ~~~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~ 607 (662)
......+++..+|..||++++||..|++|++++|||++|+|||+++.|+..|++.+ +.+|+++++.|+++
T Consensus 78 ~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~----------~~~g~~~~~~~~~~ 147 (172)
T PF00534_consen 78 LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIIND----------GVNGFLFDPNDIEE 147 (172)
T ss_dssp EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGT----------TTSEEEESTTSHHH
T ss_pred cccccccccccccccceeccccccccccccccccccccccceeeccccCCceeecc----------ccceEEeCCCCHHH
Confidence 22224567789999999999999999999999999999999999999999999998 78999999999999
Q ss_pred HHHHHHHHHHHhhhCHHHHHHHHHHHH
Q 006091 608 MLTALRFAIRTYREHKSSWEGLMRRGM 634 (662)
Q Consensus 608 la~aI~~~l~~~~~~~~~~~~l~~~~~ 634 (662)
++++|..++. +++.+..|++++.
T Consensus 148 l~~~i~~~l~----~~~~~~~l~~~~~ 170 (172)
T PF00534_consen 148 LADAIEKLLN----DPELRQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHHH----HHHHHHHHHHHHH
T ss_pred HHHHHHHHHC----CHHHHHHHHHHhc
Confidence 9999999998 6788888888764
No 82
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.85 E-value=1.6e-19 Score=196.66 Aligned_cols=214 Identities=15% Similarity=0.105 Sum_probs=155.1
Q ss_pred HhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHh
Q 006091 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKEL 460 (662)
Q Consensus 381 ~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~l 460 (662)
..+|.++++|+..++.+.. .+.+++++.+++++++...+.+.. .+.++++++
T Consensus 149 ~~~d~~~~~s~~~~~~l~~----------~g~~~~ki~v~g~~v~~~f~~~~~------------------~~~~~r~~~ 200 (382)
T PLN02605 149 KGVTRCFCPSEEVAKRALK----------RGLEPSQIRVYGLPIRPSFARAVR------------------PKDELRREL 200 (382)
T ss_pred CCCCEEEECCHHHHHHHHH----------cCCCHHHEEEECcccCHhhccCCC------------------CHHHHHHHc
Confidence 5789999999998877752 245678899999999865443322 156789999
Q ss_pred CCCCCCCCCEEEEEecCCCccCHHHHHHHHHhcc------CCCeE-EEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCCh
Q 006091 461 GLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEIL------ADDIQ-FVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNV 533 (662)
Q Consensus 461 gl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~------~~d~~-lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 533 (662)
|++ ++.++|+++|+....|++..+++++..+. .++++ ++++|.+. ...+.++.......+.+.|++ +
T Consensus 201 gl~--~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~-~~~~~L~~~~~~~~v~~~G~~---~ 274 (382)
T PLN02605 201 GMD--EDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK-KLQSKLESRDWKIPVKVRGFV---T 274 (382)
T ss_pred CCC--CCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH-HHHHHHHhhcccCCeEEEecc---c
Confidence 998 77899999999999999999999998753 34565 56777763 222233322222233444444 3
Q ss_pred HHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCC------cccccccccccccccCCCCccceEEECCCCHHH
Q 006091 534 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT------GGLRDTVENFNPFAREGSGEGTGWSFLPLSEES 607 (662)
Q Consensus 534 ~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~------gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~ 607 (662)
.+.++|+.||++|.++ .|++++|||+||+|+|+++. |+. +.+.+ +++|+++ .|+++
T Consensus 275 -~~~~l~~aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~----------~g~g~~~--~~~~~ 336 (382)
T PLN02605 275 -NMEEWMGACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVD----------NGFGAFS--ESPKE 336 (382)
T ss_pred -cHHHHHHhCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhH-HHHHh----------CCceeec--CCHHH
Confidence 3678999999999865 47899999999999999983 444 33444 4677764 78999
Q ss_pred HHHHHHHHHHHhhhC-HHHHHHHHHHHH--HhcCCHHHHHHHHHHH
Q 006091 608 MLTALRFAIRTYREH-KSSWEGLMRRGM--EKDYTWENAAIQYEQV 650 (662)
Q Consensus 608 la~aI~~~l~~~~~~-~~~~~~l~~~~~--~~~fs~e~~a~~~~~i 650 (662)
++++|.+++. + ++.+++|++++. ....+.+.+++.+.+.
T Consensus 337 la~~i~~ll~----~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 337 IARIVAEWFG----DKSDELEAMSENALKLARPEAVFDIVHDLHEL 378 (382)
T ss_pred HHHHHHHHHc----CCHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 9999999987 5 888888888773 3456677777666544
No 83
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.83 E-value=5e-19 Score=191.03 Aligned_cols=239 Identities=18% Similarity=0.181 Sum_probs=168.0
Q ss_pred HhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHh
Q 006091 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKEL 460 (662)
Q Consensus 381 ~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~l 460 (662)
..++++++-|...+..++. .+.......+.+.+-.+|.+.+.+.-.. .+...+...+.+.
T Consensus 208 ~~~~~~~~ns~~~~~~f~~--------~~~~L~~~d~~~~y~ei~~s~~~~~~~~------------~~~~~~~~~r~~~ 267 (495)
T KOG0853|consen 208 GLAWKILVNSYFTKRQFKA--------TFVSLSNSDITSTYPEIDGSWFTYGQYE------------SHLELRLPVRLYR 267 (495)
T ss_pred hccceEecchhhhhhhhhh--------hhhhcCCCCcceeeccccchhccccccc------------cchhcccccceee
Confidence 4567777766666655542 2233344457788888887765531100 0001122233333
Q ss_pred CCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC-------CCeEEEEEeCC-----C---hhhHHHHHHHHhhcC--C
Q 006091 461 GLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA-------DDIQFVMLGSG-----D---PQFESWMRDTEATYK--D 523 (662)
Q Consensus 461 gl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~-------~d~~lvivG~g-----~---~~~~~~~~~l~~~~~--~ 523 (662)
+.. ..+.....+.++.|.||++++++++..+.. .+.+++++|+. . -.+...+..+.+.+. .
T Consensus 268 ~v~--~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~g 345 (495)
T KOG0853|consen 268 GVS--GIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLLG 345 (495)
T ss_pred eec--ccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCccC
Confidence 433 346678889999999999999999988754 26788888843 1 123344444444442 4
Q ss_pred cEEEEcCC-ChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECC
Q 006091 524 KYRGWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLP 602 (662)
Q Consensus 524 ~~~~~~~~-~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~ 602 (662)
+++.++.. ++.....+++.+.+++.....|.||++.+|||+||+||||++.||..|+|.+ +.+|+++++
T Consensus 346 ~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~----------~~tG~l~dp 415 (495)
T KOG0853|consen 346 QFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEIVVH----------GVTGLLIDP 415 (495)
T ss_pred ceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEEEEc----------CCcceeeCC
Confidence 66666543 4444456777777777777779999999999999999999999999999999 999999999
Q ss_pred CCHH---HHHHHHHHHHHHhhhCHHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHhhh
Q 006091 603 LSEE---SMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEWASI 656 (662)
Q Consensus 603 ~d~~---~la~aI~~~l~~~~~~~~~~~~l~~~~---~~~~fs~e~~a~~~~~iy~~~~~ 656 (662)
+.+ .++++|.++.. |++.|.+|++++ +.+.|+|..+.+++.++..+...
T Consensus 416 -~~e~~~~~a~~~~kl~~----~p~l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~~~~~ 470 (495)
T KOG0853|consen 416 -GQEAVAELADALLKLRR----DPELWARMGKNGLKRVKEMFSWQHYSERIASVLGKYLQ 470 (495)
T ss_pred -chHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHhcCC
Confidence 555 58888888776 999999999998 56789999999888888775543
No 84
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.83 E-value=1e-18 Score=192.30 Aligned_cols=293 Identities=15% Similarity=0.121 Sum_probs=196.8
Q ss_pred ccEEEeCCCCcchHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcc
Q 006091 291 KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTG 370 (662)
Q Consensus 291 pDVVh~h~~~~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 370 (662)
-|+|.+||+|..++|.+++.+. +..++-+.+|.. ||.... +..+- |
T Consensus 133 ~d~vWVhDYhL~llp~~LR~~~------~~~~IgfFlHiP-----FPs~ei---------fr~LP-----~--------- 178 (487)
T TIGR02398 133 GATVWVHDYNLWLVPGYIRQLR------PDLKIAFFHHTP-----FPSADV---------FNILP-----W--------- 178 (487)
T ss_pred CCEEEEecchhhHHHHHHHHhC------CCCeEEEEeeCC-----CCChHH---------HhhCC-----c---------
Confidence 4899999999999999999875 688999999976 233222 11111 0
Q ss_pred hhhhHHHHHHHhcCEEEecCcchhhhhhccc---CCc------chh------------------hhhccCCCceeEecCC
Q 006091 371 EAVNVLKGAIVTADRLLTVSKGYSWEITTVE---GGY------GLH------------------EILSSRKSVLNGITNG 423 (662)
Q Consensus 371 ~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~---~~~------~l~------------------~~~~~~~~ki~vIpnG 423 (662)
+..+ -..+-.+|.|-+-+..+++.+.+.- .+. +.. -.+..+..++.++|+|
T Consensus 179 -r~~l-l~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiG 256 (487)
T TIGR02398 179 -REQI-IGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVG 256 (487)
T ss_pred -hHHH-HHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECE
Confidence 0112 2334567777777777665443210 000 000 0011233458899999
Q ss_pred CCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--C----C
Q 006091 424 IDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D----D 497 (662)
Q Consensus 424 vd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~----d 497 (662)
||+..|.+.... .+.......++++++ ++++|++++|+++.||+...++|++++.+ + +
T Consensus 257 ID~~~f~~~~~~-----------~~~~~~~~~lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gk 320 (487)
T TIGR02398 257 TDPERIRSALAA-----------ASIREMMERIRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGK 320 (487)
T ss_pred ecHHHHHHHhcC-----------chHHHHHHHHHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCc
Confidence 999887543211 011122456788876 57899999999999999999999999865 3 5
Q ss_pred eEEEEEeCCC----hhhHHHHHHHHh---hcCC--------cEEEEcC-CChHHHHHHHHhcCEEEEcCCCCCCcHHHHH
Q 006091 498 IQFVMLGSGD----PQFESWMRDTEA---TYKD--------KYRGWVG-FNVPISHRITAGCDILLMPSRFEPCGLNQLY 561 (662)
Q Consensus 498 ~~lvivG~g~----~~~~~~~~~l~~---~~~~--------~~~~~~~-~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lE 561 (662)
+.|+++|.+. +.+.++.+.+.+ ..+. .+..+.+ .+.+++..+|+.|||++.+|..||++|+..|
T Consensus 321 v~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~E 400 (487)
T TIGR02398 321 VTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKE 400 (487)
T ss_pred eEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhh
Confidence 7899998763 334444443333 2211 1222222 2567777999999999999999999999999
Q ss_pred HHHcCC----cEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HH
Q 006091 562 AMRYGT----IPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--ME 635 (662)
Q Consensus 562 Ama~G~----PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~--~~ 635 (662)
+|+|+. |+|.|..+|..+.+. .+++++|.|++++|++|..+++... +++++..++. ..
T Consensus 401 yva~~~~~~GvLILSefaGaa~~l~-------------~AllVNP~d~~~~A~ai~~AL~m~~---~Er~~R~~~l~~~v 464 (487)
T TIGR02398 401 YVAAQGLLDGVLVLSEFAGAAVELK-------------GALLTNPYDPVRMDETIYVALAMPK---AEQQARMREMFDAV 464 (487)
T ss_pred HHhhhcCCCCCEEEeccccchhhcC-------------CCEEECCCCHHHHHHHHHHHHcCCH---HHHHHHHHHHHHHH
Confidence 999988 999999999986662 5899999999999999999998532 2222222221 34
Q ss_pred hcCCHHHHHHHHHHHH
Q 006091 636 KDYTWENAAIQYEQVF 651 (662)
Q Consensus 636 ~~fs~e~~a~~~~~iy 651 (662)
..++...-++.+++-.
T Consensus 465 ~~~d~~~W~~~fl~~l 480 (487)
T TIGR02398 465 NYYDVQRWADEFLAAV 480 (487)
T ss_pred hhCCHHHHHHHHHHHh
Confidence 5677777777776543
No 85
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.83 E-value=1.1e-18 Score=190.48 Aligned_cols=220 Identities=13% Similarity=0.092 Sum_probs=153.1
Q ss_pred HhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHh
Q 006091 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKEL 460 (662)
Q Consensus 381 ~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~l 460 (662)
..+|.+++.|+..++.+.. .+.+..++.++.|+++.....+.. +.++++++
T Consensus 146 ~~~d~~~v~s~~~~~~l~~----------~gi~~~ki~v~GiPv~~~f~~~~~-------------------~~~~~~~~ 196 (391)
T PRK13608 146 PYSTRYYVATKETKQDFID----------VGIDPSTVKVTGIPIDNKFETPID-------------------QKQWLIDN 196 (391)
T ss_pred CCCCEEEECCHHHHHHHHH----------cCCCHHHEEEECeecChHhccccc-------------------HHHHHHHc
Confidence 4689999999998877752 234567888888877643322111 34567788
Q ss_pred CCCCCCCCCE-EEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChh-hHHHHHHHHhhcCCcEEEEcCCChHHHHH
Q 006091 461 GLPIRPDCPL-IGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQ-FESWMRDTEATYKDKYRGWVGFNVPISHR 538 (662)
Q Consensus 461 gl~~~~~~~~-Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 538 (662)
+++ +++++ +++.|++...||++.+++++.+. .+++++++++++++. .+.+.+......++. +.|+.+ .+..
T Consensus 197 ~l~--~~~~~ilv~~G~lg~~k~~~~li~~~~~~-~~~~~~vvv~G~~~~l~~~l~~~~~~~~~v~---~~G~~~-~~~~ 269 (391)
T PRK13608 197 NLD--PDKQTILMSAGAFGVSKGFDTMITDILAK-SANAQVVMICGKSKELKRSLTAKFKSNENVL---ILGYTK-HMNE 269 (391)
T ss_pred CCC--CCCCEEEEECCCcccchhHHHHHHHHHhc-CCCceEEEEcCCCHHHHHHHHHHhccCCCeE---EEeccc-hHHH
Confidence 887 55554 56789999999999999986432 257888776544332 222222222222233 344443 3678
Q ss_pred HHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeC-Cccc----ccccccccccccCCCCccceEEECCCCHHHHHHHHH
Q 006091 539 ITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA-TGGL----RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALR 613 (662)
Q Consensus 539 ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~-~gg~----~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~ 613 (662)
+|+.||+++. ++.|++++|||++|+|+|+++ .+|. ...+.+ .+.|++. .|+++++++|.
T Consensus 270 ~~~~aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~----------~G~g~~~--~~~~~l~~~i~ 333 (391)
T PRK13608 270 WMASSQLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEE----------KGFGKIA--DTPEEAIKIVA 333 (391)
T ss_pred HHHhhhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHh----------CCcEEEe--CCHHHHHHHHH
Confidence 9999999996 356899999999999999986 3331 122233 4566654 58999999999
Q ss_pred HHHHHhhhCHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHhhh
Q 006091 614 FAIRTYREHKSSWEGLMRRGM--EKDYTWENAAIQYEQVFEWASI 656 (662)
Q Consensus 614 ~~l~~~~~~~~~~~~l~~~~~--~~~fs~e~~a~~~~~iy~~~~~ 656 (662)
++++ |++.+++|++++. .+.++++++++.+++++.....
T Consensus 334 ~ll~----~~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~ 374 (391)
T PRK13608 334 SLTN----GNEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQ 374 (391)
T ss_pred HHhc----CHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhh
Confidence 8886 8889999998883 5679999999999999876554
No 86
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.82 E-value=1.2e-18 Score=173.05 Aligned_cols=117 Identities=26% Similarity=0.279 Sum_probs=90.9
Q ss_pred EEecCCCccCHHHHHHHHHhccCC--CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCC--ChHHHHHHHHhcCEEEE
Q 006091 473 FIGRLDYQKGIDLIRLAAPEILAD--DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF--NVPISHRITAGCDILLM 548 (662)
Q Consensus 473 ~vGrl~~~Kg~d~Ll~A~~~l~~~--d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~ll~~aDi~v~ 548 (662)
++|++.+.||++.+++++..+.++ +++++++|.+....... ..+........+.++++ ..+....+++.||++++
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di~l~ 187 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPEREYLE-ELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVL 187 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCChHHHH-HHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCEEEe
Confidence 999999999999999999999764 89999999986432221 11122121222223333 34555567777999999
Q ss_pred cCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEE
Q 006091 549 PSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSF 600 (662)
Q Consensus 549 PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~ 600 (662)
||..|++|++++|||++|+|+|+++.++..|++.+ +++|+++
T Consensus 188 ~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~----------~~~g~~~ 229 (229)
T cd01635 188 PSLREGFGLVVLEAMACGLPVIATDVGGPPEIVED----------GLTGLLV 229 (229)
T ss_pred cccccCcChHHHHHHhCCCCEEEcCCCCcceEEEC----------CCceEEC
Confidence 99999999999999999999999999999999888 7899875
No 87
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.76 E-value=8e-17 Score=175.06 Aligned_cols=221 Identities=14% Similarity=0.009 Sum_probs=140.0
Q ss_pred HHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHH
Q 006091 379 AIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK 458 (662)
Q Consensus 379 ~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~ 458 (662)
..+.+|.++++|+...+.+.. .+ .++.++.|.+....... . .+..+++
T Consensus 131 ~~~~~d~i~~~~~~~~~~~~~----------~g---~~~~~~G~p~~~~~~~~-~------------------~~~~~~~ 178 (380)
T PRK00025 131 IAKATDHVLALFPFEAAFYDK----------LG---VPVTFVGHPLADAIPLL-P------------------DRAAARA 178 (380)
T ss_pred HHHHHhhheeCCccCHHHHHh----------cC---CCeEEECcCHHHhcccc-c------------------ChHHHHH
Confidence 356789999999876665431 11 23555555553221110 1 1346778
Q ss_pred HhCCCCCCCCCEEE-EEe-cCCCc-cCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCCh
Q 006091 459 ELGLPIRPDCPLIG-FIG-RLDYQ-KGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNV 533 (662)
Q Consensus 459 ~lgl~~~~~~~~Il-~vG-rl~~~-Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 533 (662)
+++++ ++.++|+ +.| |.... +.++.++++++.+.+ ++++++++|.+++..+...+.+.......+..+ .
T Consensus 179 ~l~~~--~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~v~~~---~- 252 (380)
T PRK00025 179 RLGLD--PDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPKRREQIEEALAEYAGLEVTLL---D- 252 (380)
T ss_pred HcCCC--CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChhhHHHHHHHHhhcCCCCeEEE---c-
Confidence 88887 5667654 445 33343 457899999998854 478999998643333333333322102222222 2
Q ss_pred HHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEe-----------------CCcccccccccccccccCCCCccc
Q 006091 534 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-----------------ATGGLRDTVENFNPFAREGSGEGT 596 (662)
Q Consensus 534 ~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas-----------------~~gg~~eii~~~~~~~~~~~~~~~ 596 (662)
.++..+|+.||+++++| |.+.+|||++|+|+|++ +.+++++++.+ .....
T Consensus 253 ~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~~ 319 (380)
T PRK00025 253 GQKREAMAAADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAG--------RELVP 319 (380)
T ss_pred ccHHHHHHhCCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcC--------CCcch
Confidence 24568999999999988 88999999999999987 45666777765 11236
Q ss_pred eEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHhh
Q 006091 597 GWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWAS 655 (662)
Q Consensus 597 G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy~~~~ 655 (662)
+++.+..|+++++++|.++++ |++.+++|++++ ..+.. -...+++..+++...+
T Consensus 320 ~~~~~~~~~~~l~~~i~~ll~----~~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~~~ 375 (380)
T PRK00025 320 ELLQEEATPEKLARALLPLLA----DGARRQALLEGFTELHQQL-RCGADERAAQAVLELL 375 (380)
T ss_pred hhcCCCCCHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHh
Confidence 678788899999999999987 888888888875 22222 2224444444444433
No 88
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.76 E-value=1.1e-16 Score=186.62 Aligned_cols=292 Identities=14% Similarity=0.147 Sum_probs=197.4
Q ss_pred ccEEEeCCCCcchHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcc
Q 006091 291 KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTG 370 (662)
Q Consensus 291 pDVVh~h~~~~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 370 (662)
=|+|.+||+|..++|.+++.+. +.+++-+.+|.. ||... .+..+-|
T Consensus 232 gD~VWVHDYHL~LlP~~LR~~~------p~~~IGfFlHiP-----FPs~E---------ifr~LP~-------------- 277 (934)
T PLN03064 232 GDVVWCHDYHLMFLPKCLKEYN------SNMKVGWFLHTP-----FPSSE---------IHRTLPS-------------- 277 (934)
T ss_pred CCEEEEecchhhHHHHHHHHhC------CCCcEEEEecCC-----CCChH---------HHhhCCc--------------
Confidence 3899999999999999999876 789999999976 23322 2222111
Q ss_pred hhhhHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhh-----------ccCCCceeEecCCCCCCCCCCCCchhhcc
Q 006091 371 EAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEIL-----------SSRKSVLNGITNGIDITEWNPSSDEHIAS 439 (662)
Q Consensus 371 ~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~-----------~~~~~ki~vIpnGvd~~~~~~~~~~~i~~ 439 (662)
+..+ -..+-.||.|-+-+..+.+.+... +.+.+ ..+..++.++|.|||...|......
T Consensus 278 -r~el-L~glL~aDlIGFqT~~y~rhFl~~-----c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~---- 346 (934)
T PLN03064 278 -RSEL-LRSVLAADLVGFHTYDYARHFVSA-----CTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALET---- 346 (934)
T ss_pred -HHHH-HHHHhcCCeEEeCCHHHHHHHHHH-----HHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcC----
Confidence 1122 334557888888887777655421 01111 1122347788999998877532110
Q ss_pred cCcccccchhHHhHHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--CC----eEEEEE-----eCCCh
Q 006091 440 HYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DD----IQFVML-----GSGDP 508 (662)
Q Consensus 440 ~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d----~~lviv-----G~g~~ 508 (662)
.+......+++++++ ++.+|+.++|+++.||+...++|++.+.+ ++ +.|+.+ +++ +
T Consensus 347 -------~~v~~~~~~lr~~~~-----g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v-~ 413 (934)
T PLN03064 347 -------PQVQQHIKELKERFA-----GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDV-P 413 (934)
T ss_pred -------hhHHHHHHHHHHHhC-----CceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCc-H
Confidence 001111245677664 56799999999999999999999998754 33 334433 333 3
Q ss_pred hhHHHHHHHHh---hcCCcE-------EEE--cCCChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCC----cEEEe
Q 006091 509 QFESWMRDTEA---TYKDKY-------RGW--VGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGT----IPVVH 572 (662)
Q Consensus 509 ~~~~~~~~l~~---~~~~~~-------~~~--~~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~----PvVas 572 (662)
.|..+.+.+.. ..+.++ +.+ ...+.+++.++|+.|||+++||..||++++.+|||+|+. ++|.|
T Consensus 414 eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILS 493 (934)
T PLN03064 414 EYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILS 493 (934)
T ss_pred HHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEEe
Confidence 44444333322 222222 111 123556677999999999999999999999999999944 45559
Q ss_pred CCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HHhcCCHHHHHHHHHHH
Q 006091 573 ATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQV 650 (662)
Q Consensus 573 ~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~i 650 (662)
...|..+.+. ..+++|+|.|++++|++|..++.. ++++++++.++. ....+++...++.+++-
T Consensus 494 EfaGaa~~L~------------~~AllVNP~D~~~vA~AI~~AL~M---~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~ 558 (934)
T PLN03064 494 EFAGAAQSLG------------AGAILVNPWNITEVAASIAQALNM---PEEEREKRHRHNFMHVTTHTAQEWAETFVSE 558 (934)
T ss_pred CCCchHHHhC------------CceEEECCCCHHHHHHHHHHHHhC---CHHHHHHHHHHHHhhcccCCHHHHHHHHHHH
Confidence 9888888774 369999999999999999999974 455555555544 35789999999998876
Q ss_pred HHHhh
Q 006091 651 FEWAS 655 (662)
Q Consensus 651 y~~~~ 655 (662)
+..+.
T Consensus 559 L~~~~ 563 (934)
T PLN03064 559 LNDTV 563 (934)
T ss_pred HHHHH
Confidence 66554
No 89
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.75 E-value=4.7e-16 Score=166.21 Aligned_cols=184 Identities=13% Similarity=0.096 Sum_probs=127.4
Q ss_pred hHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhH
Q 006091 374 NVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCK 453 (662)
Q Consensus 374 ~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k 453 (662)
.+++..++.+|.|+++|+.+++.+.. .+....++.++++..+.....+..
T Consensus 115 ~~~~~~~~~aD~iI~~S~~~~~~l~~----------~g~~~~~i~~~~~~~~~~~~~~~~-------------------- 164 (333)
T PRK09814 115 KEEIDMLNLADVLIVHSKKMKDRLVE----------EGLTTDKIIVQGIFDYLNDIELVK-------------------- 164 (333)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHH----------cCCCcCceEecccccccccccccc--------------------
Confidence 45677888999999999999988853 123445677776655432111100
Q ss_pred HHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCCh
Q 006091 454 IALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNV 533 (662)
Q Consensus 454 ~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 533 (662)
.+ ...+.|+|+|++...+++.. ..++++|+++|+|+... ....++.+.|++ +.
T Consensus 165 --------~~--~~~~~i~yaG~l~k~~~l~~--------~~~~~~l~i~G~g~~~~-------~~~~~V~f~G~~--~~ 217 (333)
T PRK09814 165 --------TP--SFQKKINFAGNLEKSPFLKN--------WSQGIKLTVFGPNPEDL-------ENSANISYKGWF--DP 217 (333)
T ss_pred --------cc--cCCceEEEecChhhchHHHh--------cCCCCeEEEECCCcccc-------ccCCCeEEecCC--CH
Confidence 01 24568999999995432211 23579999999996221 112344555555 56
Q ss_pred HHHHHHHHhcCEEEEcCCC-----------CCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECC
Q 006091 534 PISHRITAGCDILLMPSRF-----------EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLP 602 (662)
Q Consensus 534 ~~~~~ll~~aDi~v~PS~~-----------E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~ 602 (662)
+++..+|+. |+.+.+... -++|..+.|+||||+|||+++.+++.|+|++ +++|++++
T Consensus 218 eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~----------~~~G~~v~- 285 (333)
T PRK09814 218 EELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVE----------NGLGFVVD- 285 (333)
T ss_pred HHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHh----------CCceEEeC-
Confidence 667778887 665554321 2678999999999999999999999999999 89999997
Q ss_pred CCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH
Q 006091 603 LSEESMLTALRFAIRTYREHKSSWEGLMRRG 633 (662)
Q Consensus 603 ~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~ 633 (662)
+.++++++|..+ +++.+.+|++++
T Consensus 286 -~~~el~~~l~~~------~~~~~~~m~~n~ 309 (333)
T PRK09814 286 -SLEELPEIIDNI------TEEEYQEMVENV 309 (333)
T ss_pred -CHHHHHHHHHhc------CHHHHHHHHHHH
Confidence 678888888764 345677787776
No 90
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.72 E-value=2e-15 Score=152.68 Aligned_cols=227 Identities=15% Similarity=0.106 Sum_probs=159.9
Q ss_pred HhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHh
Q 006091 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKEL 460 (662)
Q Consensus 381 ~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~l 460 (662)
..||.+++-|.+....|. ...+. ..+.+++..-+++.+ .+..
T Consensus 221 ~~ad~vm~NssWT~nHI~---------qiW~~--~~~~iVyPPC~~e~l---------------------------ks~~ 262 (465)
T KOG1387|consen 221 SKADIVMTNSSWTNNHIK---------QIWQS--NTCSIVYPPCSTEDL---------------------------KSKF 262 (465)
T ss_pred ccceEEEecchhhHHHHH---------HHhhc--cceeEEcCCCCHHHH---------------------------HHHh
Confidence 578889998888877664 22222 456667655554422 2222
Q ss_pred CCCCCCCCCEEEEEecCCCccCHH-HHHHHHHhccCC------CeEEEEEeCCC-hhhHHHHHHHHh---hc--CCcEEE
Q 006091 461 GLPIRPDCPLIGFIGRLDYQKGID-LIRLAAPEILAD------DIQFVMLGSGD-PQFESWMRDTEA---TY--KDKYRG 527 (662)
Q Consensus 461 gl~~~~~~~~Il~vGrl~~~Kg~d-~Ll~A~~~l~~~------d~~lvivG~g~-~~~~~~~~~l~~---~~--~~~~~~ 527 (662)
+. .+.+.+.++++|.+.|+|+.. +=++|+-...++ +++|+|+|+.. .+.++.++.++. .. ..++..
T Consensus 263 ~t-e~~r~~~ll~l~Q~RPEKnH~~Lql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F 341 (465)
T KOG1387|consen 263 GT-EGERENQLLSLAQFRPEKNHKILQLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQF 341 (465)
T ss_pred cc-cCCcceEEEEEeecCcccccHHHHHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEE
Confidence 22 124568999999999999999 334444443332 68999999963 333444444432 22 223333
Q ss_pred EcCCChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccc-cccccccccccCCCCccceEEECCCCHH
Q 006091 528 WVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLR-DTVENFNPFAREGSGEGTGWSFLPLSEE 606 (662)
Q Consensus 528 ~~~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~-eii~~~~~~~~~~~~~~~G~l~~~~d~~ 606 (662)
.+..+-+.+..+|..|.+.++....|.||++++|+||+|+.+|+++.||.. |++.++++ ..+|++.+ +.+
T Consensus 342 ~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G-------~~tGFla~--t~~ 412 (465)
T KOG1387|consen 342 EKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDG-------ETTGFLAP--TDE 412 (465)
T ss_pred EecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCC-------ccceeecC--ChH
Confidence 443344556689999999999999999999999999999999999988776 88887543 55999974 688
Q ss_pred HHHHHHHHHHHHhhhCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHhhhCC
Q 006091 607 SMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWASIDP 658 (662)
Q Consensus 607 ~la~aI~~~l~~~~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy~~~~~~~ 658 (662)
+.+++|.++++. +.+.+..+.+++ ...+|+-...-+.|.+.+..++.++
T Consensus 413 EYaE~iLkIv~~---~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kll~e~ 463 (465)
T KOG1387|consen 413 EYAEAILKIVKL---NYDERNMMRRNARKSLARFGELKFDKDWENPICKLLEEE 463 (465)
T ss_pred HHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHhhccc
Confidence 999999999984 777666666666 3567888888888888888777653
No 91
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.72 E-value=1.5e-15 Score=158.44 Aligned_cols=220 Identities=29% Similarity=0.424 Sum_probs=161.0
Q ss_pred hcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhC
Q 006091 382 TADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELG 461 (662)
Q Consensus 382 ~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lg 461 (662)
..+.+++.+......+.. . ....++.+++|+++...+.+.. ..
T Consensus 150 ~~~~~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~~~--------------------------~~ 192 (381)
T COG0438 150 LADRVIAVSPALKELLEA----------L-GVPNKIVVIPNGIDTEKFAPAR--------------------------IG 192 (381)
T ss_pred cccEEEECCHHHHHHHHH----------h-CCCCCceEecCCcCHHHcCccc--------------------------cC
Confidence 367788887765443321 1 1123688999999987765420 01
Q ss_pred CCCCCC--CCEEEEEecCCCccCHHHHHHHHHhccCC--CeEEEEEeCCChhhHHHHHHHHhh---cCCcEEEEcCCChH
Q 006091 462 LPIRPD--CPLIGFIGRLDYQKGIDLIRLAAPEILAD--DIQFVMLGSGDPQFESWMRDTEAT---YKDKYRGWVGFNVP 534 (662)
Q Consensus 462 l~~~~~--~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~--d~~lvivG~g~~~~~~~~~~l~~~---~~~~~~~~~~~~~~ 534 (662)
+. .+ ...++++||+.+.||++.+++++..+... ++.++++|.++............. ..+.+.+++ ..+
T Consensus 193 ~~--~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~g~~--~~~ 268 (381)
T COG0438 193 LL--PEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPERREELEKLAKKLGLEDNVKFLGYV--PDE 268 (381)
T ss_pred CC--cccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCccHHHHHHHHHHhCCCCcEEEeccc--CHH
Confidence 11 22 36899999999999999999999999764 489999999963211122222222 223333333 334
Q ss_pred HHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHH
Q 006091 535 ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRF 614 (662)
Q Consensus 535 ~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~ 614 (662)
....+++.||++++||.+|++|++++|||++|+|+|+++.++..+++.+ +.+|+++++.+.+++++++..
T Consensus 269 ~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~----------~~~g~~~~~~~~~~~~~~i~~ 338 (381)
T COG0438 269 ELAELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVED----------GETGLLVPPGDVEELADALEQ 338 (381)
T ss_pred HHHHHHHhCCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcC----------CCceEecCCCCHHHHHHHHHH
Confidence 5567899999999999999999999999999999999999999999988 557887777789999999999
Q ss_pred HHHHhhhCHHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHhhh
Q 006091 615 AIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEWASI 656 (662)
Q Consensus 615 ~l~~~~~~~~~~~~l~~~~---~~~~fs~e~~a~~~~~iy~~~~~ 656 (662)
+++ +++.++.+...+ +.+.|+|+++++++.++|.....
T Consensus 339 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (381)
T COG0438 339 LLE----DPELREELGEAARERVEEEFSWERIAEQLLELYEELLA 379 (381)
T ss_pred Hhc----CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 887 555566665422 34799999999999999987764
No 92
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.72 E-value=4e-16 Score=168.24 Aligned_cols=215 Identities=15% Similarity=0.055 Sum_probs=135.3
Q ss_pred HHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCC-CCCCCCCCCchhhcccCcccccchhHHhHHHHHH
Q 006091 380 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGI-DITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK 458 (662)
Q Consensus 380 ~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGv-d~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~ 458 (662)
.+.+|.++++|+..++.+.. .+.++.++.+++|++ |...+.+.... ....++
T Consensus 139 ~~~ad~~~~~s~~~~~~l~~----------~G~~~~kI~vign~v~d~~~~~~~~~~-----------------~~~~~~ 191 (363)
T cd03786 139 DKLSDLHFAPTEEARRNLLQ----------EGEPPERIFVVGNTMIDALLRLLELAK-----------------KELILE 191 (363)
T ss_pred HHHhhhccCCCHHHHHHHHH----------cCCCcccEEEECchHHHHHHHHHHhhc-----------------cchhhh
Confidence 45789999999998887642 245678899999995 53222111000 012245
Q ss_pred HhCCCCCCCCCEEEEEecCCC---ccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcC-CcEEEEcCC-Ch
Q 006091 459 ELGLPIRPDCPLIGFIGRLDY---QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWVGF-NV 533 (662)
Q Consensus 459 ~lgl~~~~~~~~Il~vGrl~~---~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~-~~~~~~~~~-~~ 533 (662)
.++++ ++..++++.||... .|+++.+++|++.+...++.+++.|.++ ....+.+.+..... ...+.++++ ..
T Consensus 192 ~~~~~--~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~-~~~~l~~~~~~~~~~~~~v~~~~~~~~ 268 (363)
T cd03786 192 LLGLL--PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR-TRPRIREAGLEFLGHHPNVLLISPLGY 268 (363)
T ss_pred hcccC--CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC-hHHHHHHHHHhhccCCCCEEEECCcCH
Confidence 66765 45567778898775 7999999999999865457777766654 22233322222211 122223332 34
Q ss_pred HHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCC-cccccccccccccccCCCCccceEEECCCCHHHHHHHH
Q 006091 534 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT-GGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTAL 612 (662)
Q Consensus 534 ~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~-gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI 612 (662)
+.+..+|+.||++|.+|- | .+.|||++|+|+|+++. +...+.+.. +.++.+. .|+++++++|
T Consensus 269 ~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~-----------g~~~~~~-~~~~~i~~~i 331 (363)
T cd03786 269 LYFLLLLKNADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVES-----------GTNVLVG-TDPEAILAAI 331 (363)
T ss_pred HHHHHHHHcCcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhhe-----------eeEEecC-CCHHHHHHHH
Confidence 456789999999999993 4 47999999999999864 335555543 2333332 3689999999
Q ss_pred HHHHHHhhhCHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 006091 613 RFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQ 649 (662)
Q Consensus 613 ~~~l~~~~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~ 649 (662)
..+++ ++..+.+|. ...|.-.+.+++..+
T Consensus 332 ~~ll~----~~~~~~~~~----~~~~~~~~a~~~I~~ 360 (363)
T cd03786 332 EKLLS----DEFAYSLMS----INPYGDGNASERIVE 360 (363)
T ss_pred HHHhc----CchhhhcCC----CCCCCCCHHHHHHHH
Confidence 98876 666555543 234443444444444
No 93
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.70 E-value=1.6e-15 Score=164.06 Aligned_cols=214 Identities=16% Similarity=0.076 Sum_probs=140.5
Q ss_pred hcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCC-CCCCCCCCCchhhcccCcccccchhHHhHHHHHHHh
Q 006091 382 TADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGI-DITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKEL 460 (662)
Q Consensus 382 ~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGv-d~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~l 460 (662)
.+|.++++|+..++.+.. .+.+++++.+++|++ |...+..... .+..+++++
T Consensus 141 ~ad~~~~~s~~~~~~l~~----------~G~~~~~I~vign~~~d~~~~~~~~~-----------------~~~~~~~~~ 193 (365)
T TIGR00236 141 IADLHFAPTEQAKDNLLR----------ENVKADSIFVTGNTVIDALLTNVEIA-----------------YSSPVLSEF 193 (365)
T ss_pred HHHhccCCCHHHHHHHHH----------cCCCcccEEEeCChHHHHHHHHHhhc-----------------cchhHHHhc
Confidence 579999999999988753 245678899999996 4321111000 023455666
Q ss_pred CCCCCCCCCEEEEEe-cC-CCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHH-HHhhcCCcEEEEcCCChHH
Q 006091 461 GLPIRPDCPLIGFIG-RL-DYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRD-TEATYKDKYRGWVGFNVPI 535 (662)
Q Consensus 461 gl~~~~~~~~Il~vG-rl-~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~ 535 (662)
+. +.+++++.+ |. ...|+++.+++|+.++.+ ++++++++|.+++.....+.. +....++.+.+.+ ....
T Consensus 194 ~~----~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~ 267 (365)
T TIGR00236 194 GE----DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNPVVREPLHKHLGDSKRVHLIEPL--EYLD 267 (365)
T ss_pred CC----CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCChHHHHHHHHHhCCCCCEEEECCC--ChHH
Confidence 52 235555555 44 245899999999999854 478999987654333222221 1111122333333 3334
Q ss_pred HHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEe-CCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHH
Q 006091 536 SHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-ATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRF 614 (662)
Q Consensus 536 ~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas-~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~ 614 (662)
...+++.||+++.+| |..++|||+||+|||++ +.|+..+++.. +++++++ .|+++++++|..
T Consensus 268 ~~~~l~~ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~-----------g~~~lv~-~d~~~i~~ai~~ 330 (365)
T TIGR00236 268 FLNLAANSHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEA-----------GTNKLVG-TDKENITKAAKR 330 (365)
T ss_pred HHHHHHhCCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhc-----------CceEEeC-CCHHHHHHHHHH
Confidence 557999999999888 56789999999999996 77888888876 4666664 789999999998
Q ss_pred HHHHhhhCHHHHHHHHHHH--HHhcCCHHHHHHHHHH
Q 006091 615 AIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQ 649 (662)
Q Consensus 615 ~l~~~~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~ 649 (662)
++. +++.+++++.+. +....+++++++.+.+
T Consensus 331 ll~----~~~~~~~~~~~~~~~g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 331 LLT----DPDEYKKMSNASNPYGDGEASERIVEELLN 363 (365)
T ss_pred HHh----ChHHHHHhhhcCCCCcCchHHHHHHHHHHh
Confidence 886 788887777654 2223444555554443
No 94
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.64 E-value=8.8e-15 Score=160.20 Aligned_cols=442 Identities=16% Similarity=0.167 Sum_probs=223.4
Q ss_pred ccCcHHHHHhhHHHHHHhC-CCcEEEEeecCCCCC--------CcccchhhhcccCceeEEeecCCceEEEEEEEeeCCc
Q 006091 166 KTGGLGDVCGSLPVALAAR-GHRVMVVSPRYFNGT--------AADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGV 236 (662)
Q Consensus 166 ~~GG~~~~~~~La~~L~~~-GheV~Vit~~~~~~~--------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~gv 236 (662)
+.||+=+++..-|..+++. |.+..+|.|..+... +.++.+...++. +......+.+.+...+|-
T Consensus 9 KVGGIYTVi~tKA~~~~~e~gd~y~lIGP~~~~~~~~e~e~~e~~~~~l~~~~~~-------~~~~Gl~v~~GRWlI~G~ 81 (633)
T PF05693_consen 9 KVGGIYTVISTKAPTMVEEFGDNYILIGPYNEQNARTEVEEIEPDNPLLKDALES-------MREEGLKVRYGRWLIPGR 81 (633)
T ss_dssp -SSSHHHHHHHHHHHHHHHHGGGEEEEEE--TTTHHHHEEE--SSSGGHHHHHHH-------HHHTT-EEEEEEESSTT-
T ss_pred ccCCeehhhhccHHHHHHHHCCeEEEECCCCCcccCCCCCcCCCCCHHHHHHHHH-------HHhCCCeEEEeceeECCc
Confidence 5899999999999888876 889999988754321 000111111100 011122334445566775
Q ss_pred eEEEE-eCCCCC-CCCCCCCCCCC----C---CCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHH
Q 006091 237 DWVFV-DHPSYH-RPGNPYGDING----A---FGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVL 307 (662)
Q Consensus 237 ~v~~i-~~~~~~-~~~~~y~~~~~----~---~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~l 307 (662)
+.+.+ +..++. .....+.+.|. + .-.......+|..++.+.+..+.... .....=|.|+|+|+++...++
T Consensus 82 P~vIL~D~~s~~~~ldeik~~lW~~~gIdS~~~~~dynea~~Fgyava~fi~~f~~~~-~~~~~ViaHfHEWmaG~gll~ 160 (633)
T PF05693_consen 82 PIVILFDFGSFFWKLDEIKGELWELFGIDSPHGDGDYNEAVMFGYAVAWFIEEFYKFY-EEKPKVIAHFHEWMAGVGLLY 160 (633)
T ss_dssp -EEEEEEGGGGGGGHHHHHHHHHHHH-----TT-HHHHHHHHHHHHHHHHHHHHHHH--S-SEEEEEEEESGGGTTHHHH
T ss_pred CeEEEEeCchHHHHHHHHHHHHHHHcCCCCCCCCcchhHHHHHHHHHHHHHHHHHHhh-cCCCcEEEEechHhHhHHHHH
Confidence 55444 543321 11111111110 0 00112223344444443332210000 012356889999999988888
Q ss_pred HHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhcccccccccccccc-ccCcchhhhHHHHHHHhcCEE
Q 006091 308 LASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTH-ALDTGEAVNVLKGAIVTADRL 386 (662)
Q Consensus 308 l~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~k~~~~~ad~i 386 (662)
++.+. ..+.+|+|.|...- .+ ..++-..+++..+.. | .+.... .+.-..+..+++.+...||++
T Consensus 161 lr~~~------~~VaTvFTTHAT~l----GR---~l~~~~~~~Y~~L~~-~-~~d~eA~~~~i~~k~~iEraaA~~AdvF 225 (633)
T PF05693_consen 161 LRKRK------PDVATVFTTHATLL----GR---YLAANNKDFYNNLDK-F-NGDQEAGERNIYHKHSIERAAAHYADVF 225 (633)
T ss_dssp HHHTT-------SCEEEEEESS-HH----HH---HHTTTSS-TTTSGTT-S--HHHHHHHTT-HHHHHHHHHHHHHSSEE
T ss_pred HhccC------CCeeEEEEecccch----hh---HhhcCCCcHHHHhhc-c-CccccccCccchHHHHHHHHHHHhcCee
Confidence 87765 68999999997510 00 000111111111000 0 000000 000123356788889999999
Q ss_pred EecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHH----HHHh-C
Q 006091 387 LTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIAL----QKEL-G 461 (662)
Q Consensus 387 i~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~----r~~l-g 461 (662)
.+||+-.+.+.. .+++..+ =.|+|||+|...|.....- ..-+..+|..+ +..+ |
T Consensus 226 TTVSeITa~Ea~---------~LL~r~p--DvV~pNGl~v~~~~~~~ef----------qnl~~~~k~ki~~fv~~~f~g 284 (633)
T PF05693_consen 226 TTVSEITAKEAE---------HLLKRKP--DVVTPNGLNVDKFPALHEF----------QNLHAKAKEKIHEFVRGHFYG 284 (633)
T ss_dssp EESSHHHHHHHH---------HHHSS----SEE----B-GGGTSSTTHH----------HHHHHHHHHHHHHHHHHHSTT
T ss_pred eehhhhHHHHHH---------HHhCCCC--CEEcCCCccccccccchHH----------HHHHHHHHHHHHHHHHHHhcc
Confidence 999998887763 3343222 2478999998776543210 00122233322 2222 2
Q ss_pred -CCCCCCC-CEEEEEecCCC-ccCHHHHHHHHHhccC------CC---eEEEEEeCCC----h----------hhH----
Q 006091 462 -LPIRPDC-PLIGFIGRLDY-QKGIDLIRLAAPEILA------DD---IQFVMLGSGD----P----------QFE---- 511 (662)
Q Consensus 462 -l~~~~~~-~~Il~vGrl~~-~Kg~d~Ll~A~~~l~~------~d---~~lvivG~g~----~----------~~~---- 511 (662)
+..++++ .+|...||.+- .||+|.+|+|+.+|.. .+ +-|+|+-... . ...
T Consensus 285 ~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~ 364 (633)
T PF05693_consen 285 HYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVD 364 (633)
T ss_dssp ---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHH
T ss_pred cCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHH
Confidence 2333344 45566799985 8999999999998842 12 3355553321 0 000
Q ss_pred ------------------------------------------------------------HHHHHHHhh-------cCCc
Q 006091 512 ------------------------------------------------------------SWMRDTEAT-------YKDK 524 (662)
Q Consensus 512 ------------------------------------------------------------~~~~~l~~~-------~~~~ 524 (662)
..+..+... .+++
T Consensus 365 ~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVK 444 (633)
T PF05693_consen 365 EIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVK 444 (633)
T ss_dssp HHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEE
T ss_pred HHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceE
Confidence 000000000 0012
Q ss_pred EEEEcCC---Ch----HHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccce
Q 006091 525 YRGWVGF---NV----PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTG 597 (662)
Q Consensus 525 ~~~~~~~---~~----~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G 597 (662)
++....| .+ -.-.+++..||+.|+||++|++|.+.+|+.++|+|.|+|+..|...++.+.-.. ....|
T Consensus 445 VIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~-----~~~~G 519 (633)
T PF05693_consen 445 VIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIED-----PEEYG 519 (633)
T ss_dssp EEE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-H-----HGGGT
T ss_pred EEEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhcc-----CcCCc
Confidence 2211111 00 011268899999999999999999999999999999999999998887763211 13467
Q ss_pred EEE---CCCCHHHHHHHHHHHHHHhhh-CHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHhhh
Q 006091 598 WSF---LPLSEESMLTALRFAIRTYRE-HKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWASI 656 (662)
Q Consensus 598 ~l~---~~~d~~~la~aI~~~l~~~~~-~~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy~~~~~ 656 (662)
+.+ ...+.++.+++|.+.+..+.. ++..+..+..++ +.+..+|++....|.+.|+.++.
T Consensus 520 V~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~AL~ 584 (633)
T PF05693_consen 520 VYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLALR 584 (633)
T ss_dssp EEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 766 335678888888877766532 444444444444 57899999999999999998764
No 95
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.55 E-value=6.2e-12 Score=127.77 Aligned_cols=384 Identities=13% Similarity=0.088 Sum_probs=229.3
Q ss_pred HHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEeeCCceEEEEeCCCCCCC
Q 006091 170 LGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRP 249 (662)
Q Consensus 170 ~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~gv~v~~i~~~~~~~~ 249 (662)
-+-.+..-|..|+++|++|+++.-. +..+... ....+.++++-+..+.+...
T Consensus 25 RSPRMqYHA~Sla~~gf~VdliGy~--~s~p~e~--------------------------l~~hprI~ih~m~~l~~~~~ 76 (444)
T KOG2941|consen 25 RSPRMQYHALSLAKLGFQVDLIGYV--ESIPLEE--------------------------LLNHPRIRIHGMPNLPFLQG 76 (444)
T ss_pred CChHHHHHHHHHHHcCCeEEEEEec--CCCChHH--------------------------HhcCCceEEEeCCCCcccCC
Confidence 3446788899999999999999733 2111100 11235677777766654432
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcc--hHHHHHHhhcCCCCCCCCCcEEEEe
Q 006091 250 GNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAG--LVPVLLASKYRPHGVYKDARSILVI 327 (662)
Q Consensus 250 ~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~--l~~~ll~~~~~~~~~~~gip~v~ti 327 (662)
....- .--.+-++++..+..++.. .+.||++.+.+..+. ++...+.... .+.+.++.-
T Consensus 77 ~p~~~---~l~lKvf~Qfl~Ll~aL~~-----------~~~~~~ilvQNPP~iPtliv~~~~~~l------~~~KfiIDW 136 (444)
T KOG2941|consen 77 GPRVL---FLPLKVFWQFLSLLWALFV-----------LRPPDIILVQNPPSIPTLIVCVLYSIL------TGAKFIIDW 136 (444)
T ss_pred Cchhh---hhHHHHHHHHHHHHHHHHh-----------ccCCcEEEEeCCCCCchHHHHHHHHHH------hcceEEEEe
Confidence 21110 0012333455555444433 226899999875542 3333333222 689999999
Q ss_pred cCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCcchhhhhhcccCCcchh
Q 006091 328 HNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLH 407 (662)
Q Consensus 328 H~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~ 407 (662)
||+.+. ...-...|....... -....++..-+.|+.-+||++++++++...
T Consensus 137 HNy~Ys----l~l~~~~g~~h~lV~------------------l~~~~E~~fgk~a~~nLcVT~AMr~dL~qn------- 187 (444)
T KOG2941|consen 137 HNYGYS----LQLKLKLGFQHPLVR------------------LVRWLEKYFGKLADYNLCVTKAMREDLIQN------- 187 (444)
T ss_pred hhhHHH----HHHHhhcCCCCchHH------------------HHHHHHHHhhcccccchhhHHHHHHHHHHh-------
Confidence 997532 000011111111100 011233444468999999999999776531
Q ss_pred hhhccCCCceeEecCCCC-----CCC----CCCCCchhhcccCcccccchhHHhHHHHHHHhC---CCCCCCCC-EEEEE
Q 006091 408 EILSSRKSVLNGITNGID-----ITE----WNPSSDEHIASHYSIDDLSGKVQCKIALQKELG---LPIRPDCP-LIGFI 474 (662)
Q Consensus 408 ~~~~~~~~ki~vIpnGvd-----~~~----~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lg---l~~~~~~~-~Il~v 474 (662)
.+. .+..|++.-.. ++. |.+-... ..+|-+-...++......+-++.. ....++.+ +++..
T Consensus 188 --Wgi--~ra~v~YDrPps~~~~l~~~H~lf~~l~~d--~~~f~ar~~q~~~~~~taf~~k~~s~~v~~~~~~pallvsS 261 (444)
T KOG2941|consen 188 --WGI--NRAKVLYDRPPSKPTPLDEQHELFMKLAGD--HSPFRAREPQDKALERTAFTKKDASGDVQLLPERPALLVSS 261 (444)
T ss_pred --cCC--ceeEEEecCCCCCCCchhHHHHHHhhhccc--cchhhhcccccchhhhhhHhhhcccchhhhccCCCeEEEec
Confidence 121 23444442211 111 1111000 011111122344444444444443 11113444 55566
Q ss_pred ecCCCccCHHHHHHHHHhc-----cC----CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCC-ChHHHHHHHHhcC
Q 006091 475 GRLDYQKGIDLIRLAAPEI-----LA----DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGCD 544 (662)
Q Consensus 475 Grl~~~Kg~d~Ll~A~~~l-----~~----~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~ll~~aD 544 (662)
-.+.+..++..|++|+... .+ +.+-++|-|.|+ ..+.+.+.+.+..--++.....+ .-++.+.+++.||
T Consensus 262 TswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGP-lkE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saD 340 (444)
T KOG2941|consen 262 TSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGP-LKEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASAD 340 (444)
T ss_pred CCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCc-hhHHHHHHHHHhcccceeeeecccccccchhHhhccc
Confidence 6789999999999999833 11 367788888885 55666666665443232222222 3455668999999
Q ss_pred EEEEcCC--CC-CCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhh
Q 006091 545 ILLMPSR--FE-PCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYRE 621 (662)
Q Consensus 545 i~v~PS~--~E-~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~ 621 (662)
+.|+.-. .. -.|+.++.-.-||+||+|-+...+.|++++ ++||++|+ |.+++++.+..+++.+.+
T Consensus 341 lGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh----------~eNGlvF~--Ds~eLa~ql~~lf~~fp~ 408 (444)
T KOG2941|consen 341 LGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELVKH----------GENGLVFE--DSEELAEQLQMLFKNFPD 408 (444)
T ss_pred cceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHHHhc----------CCCceEec--cHHHHHHHHHHHHhcCCC
Confidence 8775543 32 579999999999999999999999999999 99999996 799999999999998888
Q ss_pred CHHHHHHHHHHHH-HhcCCHHHHHHHHHH
Q 006091 622 HKSSWEGLMRRGM-EKDYTWENAAIQYEQ 649 (662)
Q Consensus 622 ~~~~~~~l~~~~~-~~~fs~e~~a~~~~~ 649 (662)
+..++.++.++.. .+.+.|+...++...
T Consensus 409 ~a~~l~~lkkn~~e~~e~RW~~~W~~~~~ 437 (444)
T KOG2941|consen 409 NADELNQLKKNLREEQELRWDESWERTAL 437 (444)
T ss_pred CHHHHHHHHHhhHHHHhhhHHHHHHHhhh
Confidence 8888888888774 467888877666543
No 96
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.51 E-value=4.2e-14 Score=130.23 Aligned_cols=129 Identities=25% Similarity=0.390 Sum_probs=91.8
Q ss_pred CCEEEEEecCCCccCHHHHHH-HHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcC
Q 006091 468 CPLIGFIGRLDYQKGIDLIRL-AAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 544 (662)
Q Consensus 468 ~~~Il~vGrl~~~Kg~d~Ll~-A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aD 544 (662)
.++|++.|++.+.|+++.+++ +++++.+ ++++|+|+|.+++. ++++ ...++.+.+++ + ++.++++.||
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~~----l~~~-~~~~v~~~g~~---~-e~~~~l~~~d 72 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPDE----LKRL-RRPNVRFHGFV---E-ELPEILAAAD 72 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS-H----HCCH-HHCTEEEE-S----H-HHHHHHHC-S
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHHH----HHHh-cCCCEEEcCCH---H-HHHHHHHhCC
Confidence 357999999999999999999 9988865 58999999998641 2322 23345555554 3 4678999999
Q ss_pred EEEEcCC-CCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 545 ILLMPSR-FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 545 i~v~PS~-~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
++++|+. .++++.+++|||++|+|||+++. +..+++.. .+.|+++ .+|+++++++|.++++
T Consensus 73 v~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~----------~~~~~~~-~~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 73 VGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEE----------DGCGVLV-ANDPEELAEAIERLLN 134 (135)
T ss_dssp EEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS-------------SEEEE--TT-HHHHHHHHHHHHH
T ss_pred EEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheee----------cCCeEEE-CCCHHHHHHHHHHHhc
Confidence 9999996 57899999999999999999998 57777765 4678887 7899999999999876
No 97
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.51 E-value=2.7e-12 Score=139.90 Aligned_cols=207 Identities=14% Similarity=-0.005 Sum_probs=121.2
Q ss_pred HHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHH
Q 006091 377 KGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIAL 456 (662)
Q Consensus 377 k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~ 456 (662)
+...+.+|++++.++...+.+.. ...+..++.|++-......... +.+.
T Consensus 133 r~l~~~~d~v~~~~~~e~~~~~~-------------~g~~~~~vGnPv~~~~~~~~~~------------------~~~~ 181 (385)
T TIGR00215 133 KKIEKATDFLLAILPFEKAFYQK-------------KNVPCRFVGHPLLDAIPLYKPD------------------RKSA 181 (385)
T ss_pred HHHHHHHhHhhccCCCcHHHHHh-------------cCCCEEEECCchhhhccccCCC------------------HHHH
Confidence 33446889999999876654421 1235566777763221110011 3456
Q ss_pred HHHhCCCCCCCCCEEEEE-e-cCCC-ccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhc--CCcEEEEc
Q 006091 457 QKELGLPIRPDCPLIGFI-G-RLDY-QKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATY--KDKYRGWV 529 (662)
Q Consensus 457 r~~lgl~~~~~~~~Il~v-G-rl~~-~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~--~~~~~~~~ 529 (662)
+++++++ ++.++|++. | |..+ .|++..+++|++.+.+ +++++++.+..... ...++.+.... ...+..+.
T Consensus 182 r~~lgl~--~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~~-~~~~~~~~~~~~~~~~v~~~~ 258 (385)
T TIGR00215 182 REKLGID--HNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFKR-RLQFEQIKAEYGPDLQLHLID 258 (385)
T ss_pred HHHcCCC--CCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCchh-HHHHHHHHHHhCCCCcEEEEC
Confidence 7888887 677877665 3 6666 7899999999998865 47888776543222 22223322222 22333222
Q ss_pred CCChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEe-CCcccccccccc--------cccccCCCCccce--E
Q 006091 530 GFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-ATGGLRDTVENF--------NPFAREGSGEGTG--W 598 (662)
Q Consensus 530 ~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas-~~gg~~eii~~~--------~~~~~~~~~~~~G--~ 598 (662)
. ....+|+.||++|++| |.+.+|||++|+|+|+. .+..+.-.+.++ ++.--.+ .+.. +
T Consensus 259 -~---~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~--~~~~pel 327 (385)
T TIGR00215 259 -G---DARKAMFAADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILAN--RLLVPEL 327 (385)
T ss_pred -c---hHHHHHHhCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcC--Cccchhh
Confidence 1 2346999999999999 78888999999999987 232222221110 0000000 1111 1
Q ss_pred EECCCCHHHHHHHHHHHHHHhhhCH----HHHHHHHHH
Q 006091 599 SFLPLSEESMLTALRFAIRTYREHK----SSWEGLMRR 632 (662)
Q Consensus 599 l~~~~d~~~la~aI~~~l~~~~~~~----~~~~~l~~~ 632 (662)
+-+..+++.+++.+.+++. |+ +.++++.+.
T Consensus 328 ~q~~~~~~~l~~~~~~ll~----~~~~~~~~~~~~~~~ 361 (385)
T TIGR00215 328 LQEECTPHPLAIALLLLLE----NGLKAYKEMHRERQF 361 (385)
T ss_pred cCCCCCHHHHHHHHHHHhc----CCcccHHHHHHHHHH
Confidence 2234568899999998886 66 555555443
No 98
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.46 E-value=9.7e-12 Score=136.00 Aligned_cols=296 Identities=15% Similarity=0.092 Sum_probs=193.5
Q ss_pred ccEEEeCCCCcchHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcc
Q 006091 291 KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTG 370 (662)
Q Consensus 291 pDVVh~h~~~~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 370 (662)
-|+|.+||+|..++|.+++.+. +..++-+.+|.. ||... .+..+-|
T Consensus 124 ~D~VWVHDYhL~llp~~LR~~~------~~~~IgFFlHiP-----FPs~e---------ifr~LP~-------------- 169 (474)
T PRK10117 124 DDIIWIHDYHLLPFASELRKRG------VNNRIGFFLHIP-----FPTPE---------IFNALPP-------------- 169 (474)
T ss_pred CCEEEEeccHhhHHHHHHHHhC------CCCcEEEEEeCC-----CCChH---------HHhhCCC--------------
Confidence 4899999999999999999876 688999999976 23222 2221111
Q ss_pred hhhhHHHHHHHhcCEEEecCcchhhhhhccc---CC-c---chhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcc
Q 006091 371 EAVNVLKGAIVTADRLLTVSKGYSWEITTVE---GG-Y---GLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSI 443 (662)
Q Consensus 371 ~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~---~~-~---~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~ 443 (662)
+..+ -..+-.+|.|-+-+..+.+.+...- .+ . +..-.+..+..++.+.|-|||.+.|......
T Consensus 170 -r~ei-l~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~-------- 239 (474)
T PRK10117 170 -HDEL-LEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAG-------- 239 (474)
T ss_pred -hHHH-HHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhc--------
Confidence 0122 2344577888887777765444210 00 0 0000011223457888999998776422110
Q ss_pred cccchhHHhHHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--C----CeEEEEEeCCC----hhhHHH
Q 006091 444 DDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D----DIQFVMLGSGD----PQFESW 513 (662)
Q Consensus 444 ~~~~~~~~~k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~----d~~lvivG~g~----~~~~~~ 513 (662)
.......+++++++ ++.+|+.+.|+++.||+..=++|++.+.+ + ++.|+.+.... +.|.++
T Consensus 240 ----~~~~~~~~lr~~~~-----~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l 310 (474)
T PRK10117 240 ----PLPPKLAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDI 310 (474)
T ss_pred ----hHHHHHHHHHHHcC-----CCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHH
Confidence 00111245666664 56789999999999999999999999875 2 67788776432 334443
Q ss_pred HHHHHh---hcCCcE-------EEEc--CCChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCC-----cEEEeCCcc
Q 006091 514 MRDTEA---TYKDKY-------RGWV--GFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGT-----IPVVHATGG 576 (662)
Q Consensus 514 ~~~l~~---~~~~~~-------~~~~--~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~-----PvVas~~gg 576 (662)
.+.+.+ ..+.++ +.++ .++.+++.++|..|||++.++..+|..|+..|+.||.. +.|.|...|
T Consensus 311 ~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAG 390 (474)
T PRK10117 311 RHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG 390 (474)
T ss_pred HHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCccEEEecccc
Confidence 333332 222111 1111 23556667899999999999999999999999999965 367788777
Q ss_pred cccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHh
Q 006091 577 LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWA 654 (662)
Q Consensus 577 ~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy~~~ 654 (662)
..+.+. ..++++|.|.+++|++|..+++.. ++++.+..+.. ....++...-++.+++-...+
T Consensus 391 aA~~L~-------------~AllVNP~d~~~~A~Ai~~AL~Mp---~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~ 454 (474)
T PRK10117 391 AANELT-------------SALIVNPYDRDEVAAALDRALTMP---LAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (474)
T ss_pred hHHHhC-------------CCeEECCCCHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHh
Confidence 877773 378999999999999999999864 22222222222 346788888888888777665
Q ss_pred h
Q 006091 655 S 655 (662)
Q Consensus 655 ~ 655 (662)
.
T Consensus 455 ~ 455 (474)
T PRK10117 455 V 455 (474)
T ss_pred h
Confidence 4
No 99
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.44 E-value=1.3e-11 Score=136.57 Aligned_cols=291 Identities=16% Similarity=0.198 Sum_probs=163.6
Q ss_pred CccEEEeCCCCcchHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCc
Q 006091 290 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT 369 (662)
Q Consensus 290 ~pDVVh~h~~~~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 369 (662)
.-|+|.+||++..++|.+++.+. +++++.+.+|.+ ||...+ +..+.+
T Consensus 141 ~~D~VWVhDYhL~llP~~LR~~~------~~~~IgfFlHiP-----FPs~e~---------fr~lP~------------- 187 (474)
T PF00982_consen 141 PGDLVWVHDYHLMLLPQMLRERG------PDARIGFFLHIP-----FPSSEI---------FRCLPW------------- 187 (474)
T ss_dssp TT-EEEEESGGGTTHHHHHHHTT--------SEEEEEE-S---------HHH---------HTTSTT-------------
T ss_pred CCCEEEEeCCcHHHHHHHHHhhc------CCceEeeEEecC-----CCCHHH---------HhhCCc-------------
Confidence 45999999999999999999876 689999999975 233222 211111
Q ss_pred chhhhHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhh-------------ccCCCceeEecCCCCCCCCCCCCchh
Q 006091 370 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEIL-------------SSRKSVLNGITNGIDITEWNPSSDEH 436 (662)
Q Consensus 370 ~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~-------------~~~~~ki~vIpnGvd~~~~~~~~~~~ 436 (662)
+..++ ..+-.||.|-+-+..+++.+.+. +.+.+ ..+..++.+.|-|||++.+......
T Consensus 188 --r~eiL-~glL~aDlIgFqt~~~~~nFl~~-----~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~- 258 (474)
T PF00982_consen 188 --REEIL-RGLLGADLIGFQTFEYARNFLSC-----CKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARS- 258 (474)
T ss_dssp --HHHHH-HHHTTSSEEEESSHHHHHHHHHH-----HHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH--
T ss_pred --HHHHH-HHhhcCCEEEEecHHHHHHHHHH-----HHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccC-
Confidence 11223 34557899988888877655431 11111 1223357788899987655311100
Q ss_pred hcccCcccccchhHHhHHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC------CCeEEEEEeCCC---
Q 006091 437 IASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA------DDIQFVMLGSGD--- 507 (662)
Q Consensus 437 i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~------~d~~lvivG~g~--- 507 (662)
.+-.....+++++++ .+.++|+.+.|++..||+..=++|++.+.+ .++.|+-++...
T Consensus 259 ----------~~v~~~~~~l~~~~~----~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~ 324 (474)
T PF00982_consen 259 ----------PEVQERAEELREKFK----GKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSRED 324 (474)
T ss_dssp ----------S---HHHHHHHHHTT----T-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STT
T ss_pred ----------hHHHHHHHHHHHhcC----CCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCcc
Confidence 001112345777765 235899999999999999999999998865 268888777532
Q ss_pred -hhhHHHHHHHH-------hhcC-Cc---EEEEc-CCChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCc----EE
Q 006091 508 -PQFESWMRDTE-------ATYK-DK---YRGWV-GFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTI----PV 570 (662)
Q Consensus 508 -~~~~~~~~~l~-------~~~~-~~---~~~~~-~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~P----vV 570 (662)
+.+.++.+++. ..+. .. +.... ..+.++..++|..||+++.+|..+|..++..|+.+|... +|
T Consensus 325 ~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLi 404 (474)
T PF00982_consen 325 VPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQDDNPGVLI 404 (474)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS-TS--EEE
T ss_pred chhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEecCCCCceE
Confidence 23333333322 2221 11 11111 235566779999999999999999999999999999665 67
Q ss_pred EeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HHhcCCHHHHHHHHH
Q 006091 571 VHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYE 648 (662)
Q Consensus 571 as~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~ 648 (662)
.|...|..+.+.+ ..++++|.|.+++|++|.++++.. ++++++..++. ....++...-++.++
T Consensus 405 LSefaGaa~~L~~------------~al~VNP~d~~~~A~ai~~AL~M~---~~Er~~r~~~~~~~v~~~~~~~W~~~~l 469 (474)
T PF00982_consen 405 LSEFAGAAEQLSE------------AALLVNPWDIEEVADAIHEALTMP---PEERKERHARLREYVREHDVQWWAESFL 469 (474)
T ss_dssp EETTBGGGGT-TT------------S-EEE-TT-HHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHT-HHHHHHHHH
T ss_pred eeccCCHHHHcCC------------ccEEECCCChHHHHHHHHHHHcCC---HHHHHHHHHHHHHHhHhCCHHHHHHHHH
Confidence 7888888887754 458999999999999999999864 33333222222 345677777777766
Q ss_pred HHH
Q 006091 649 QVF 651 (662)
Q Consensus 649 ~iy 651 (662)
+-+
T Consensus 470 ~~L 472 (474)
T PF00982_consen 470 RDL 472 (474)
T ss_dssp HHH
T ss_pred HHh
Confidence 544
No 100
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.42 E-value=1.5e-12 Score=124.34 Aligned_cols=176 Identities=21% Similarity=0.178 Sum_probs=89.3
Q ss_pred EEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEee
Q 006091 154 IVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYR 233 (662)
Q Consensus 154 Il~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 233 (662)
|+++.. +.+. .||+++++.+|+++|+++||+|+|+++........
T Consensus 1 ili~~~-~~~~--~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~-------------------------------- 45 (177)
T PF13439_consen 1 ILITNI-FLPN--IGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEE-------------------------------- 45 (177)
T ss_dssp -EEECC--TTS--SSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SS--------------------------------
T ss_pred CEEEEe-cCCC--CChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchh--------------------------------
Confidence 455554 4453 79999999999999999999999998875432110
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHhhcC
Q 006091 234 EGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYR 313 (662)
Q Consensus 234 ~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~~~ 313 (662)
. .........+. .. ............+.+.+... +|||||+|.+.......+...
T Consensus 46 -~-~~~~~~~~~~~-----~~-------~~~~~~~~~~~~~~~~i~~~--------~~DiVh~~~~~~~~~~~~~~~--- 100 (177)
T PF13439_consen 46 -E-LVKIFVKIPYP-----IR-------KRFLRSFFFMRRLRRLIKKE--------KPDIVHIHGPPAFWIALLACR--- 100 (177)
T ss_dssp -T-EEEE---TT-S-----ST-------SS--HHHHHHHHHHHHHHHH--------T-SEEECCTTHCCCHHHHHHH---
T ss_pred -h-ccceeeeeecc-----cc-------cccchhHHHHHHHHHHHHHc--------CCCeEEecccchhHHHHHhcc---
Confidence 0 00000000000 00 00111111122222222222 689999998766554444332
Q ss_pred CCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCcch
Q 006091 314 PHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGY 393 (662)
Q Consensus 314 ~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~~~ 393 (662)
++|+++++|+.... ............ .....+++...+.+|.++++|+..
T Consensus 101 ------~~~~v~~~H~~~~~-------~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~ii~vS~~~ 150 (177)
T PF13439_consen 101 ------KVPIVYTIHGPYFE-------RRFLKSKLSPYS-----------------YLNFRIERKLYKKADRIIAVSEST 150 (177)
T ss_dssp ------CSCEEEEE-HHH---------HHTTTTSCCCHH-----------------HHHHCTTHHHHCCSSEEEESSHHH
T ss_pred ------CCCEEEEeCCCccc-------ccccccccchhh-----------------hhhhhhhhhHHhcCCEEEEECHHH
Confidence 48999999975311 000000000000 011122344467899999999999
Q ss_pred hhhhhcccCCcchhhhhccCCCceeEecCCCCCCCC
Q 006091 394 SWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEW 429 (662)
Q Consensus 394 ~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~ 429 (662)
++.+. + ++.++.++.|||||||++.|
T Consensus 151 ~~~l~---------~-~~~~~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 151 KDELI---------K-FGIPPEKIHVIYNGIDTDRF 176 (177)
T ss_dssp HHHHH---------H-HT--SS-EEE----B-CCCH
T ss_pred HHHHH---------H-hCCcccCCEEEECCccHHHc
Confidence 99885 3 56677999999999999876
No 101
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.39 E-value=1.7e-11 Score=137.47 Aligned_cols=163 Identities=12% Similarity=0.121 Sum_probs=131.7
Q ss_pred CCEEEEEe--cCCCccCHHHHHHHHHhccC--CCeEEEEEeCCCh-hhHHHHHHHHhhc-CC------------------
Q 006091 468 CPLIGFIG--RLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDP-QFESWMRDTEATY-KD------------------ 523 (662)
Q Consensus 468 ~~~Il~vG--rl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~-~~~~~~~~l~~~~-~~------------------ 523 (662)
...+++++ |+ +.|.++.+++|+..+.. ++++|.+.|.++. .+...++.+.... ..
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 397 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQP 397 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhhh
Confidence 34778888 99 99999999999999844 7999999998863 2333443331111 00
Q ss_pred -----------cEEEEcCCC-hHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCC
Q 006091 524 -----------KYRGWVGFN-VPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREG 591 (662)
Q Consensus 524 -----------~~~~~~~~~-~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~ 591 (662)
..+.+.++. +..+.+.|..+.+++.+|..|+|+ +++||+++|+|+| .-|..++|.+
T Consensus 398 ~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~~V~d-------- 465 (519)
T TIGR03713 398 ILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGIPQI---NKVETDYVEH-------- 465 (519)
T ss_pred cccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCCCee---ecCCceeeEc--------
Confidence 344455654 335668999999999999999999 9999999999999 4467899999
Q ss_pred CCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH--HhcCCHHHHHHHHHHHH
Q 006091 592 SGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM--EKDYTWENAAIQYEQVF 651 (662)
Q Consensus 592 ~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~~--~~~fs~e~~a~~~~~iy 651 (662)
+.||+++ +|.++|+++|..++. ++..|.++...++ .+.||-++++++|.+++
T Consensus 466 --~~NG~li--~d~~~l~~al~~~L~----~~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~~ 519 (519)
T TIGR03713 466 --NKNGYII--DDISELLKALDYYLD----NLKNWNYSLAYSIKLIDDYSSENIIERLNELI 519 (519)
T ss_pred --CCCcEEe--CCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhC
Confidence 9999999 799999999999987 8899999998884 58999999999998753
No 102
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.39 E-value=1.6e-12 Score=121.94 Aligned_cols=160 Identities=23% Similarity=0.234 Sum_probs=86.9
Q ss_pred CcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEeeCCceEEEEeCCCCC
Q 006091 168 GGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYH 247 (662)
Q Consensus 168 GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~gv~v~~i~~~~~~ 247 (662)
||+++++.+|+++|+++||+|+|+++....... ....++++++.++.+...
T Consensus 1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~ 51 (160)
T PF13579_consen 1 GGIERYVRELARALAARGHEVTVVTPQPDPEDD-----------------------------EEEEDGVRVHRLPLPRRP 51 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG------------------------------SEEETTEEEEEE--S-SS
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEecCCCCccc-----------------------------ccccCCceEEeccCCccc
Confidence 899999999999999999999999987532110 123468888888744321
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHhhcCCCCCCCCCcEEEEe
Q 006091 248 RPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVI 327 (662)
Q Consensus 248 ~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~~~~~~~~~gip~v~ti 327 (662)
. .. .....+..+...+ ..+ ..+||+||+|++...+++.+++.. .++|+|+++
T Consensus 52 ~---~~--------~~~~~~~~~~~~l--~~~--------~~~~Dvv~~~~~~~~~~~~~~~~~-------~~~p~v~~~ 103 (160)
T PF13579_consen 52 W---PL--------RLLRFLRRLRRLL--AAR--------RERPDVVHAHSPTAGLVAALARRR-------RGIPLVVTV 103 (160)
T ss_dssp S---GG--------GHCCHHHHHHHHC--HHC--------T---SEEEEEHHHHHHHHHHHHHH-------HT--EEEE-
T ss_pred h---hh--------hhHHHHHHHHHHH--hhh--------ccCCeEEEecccchhHHHHHHHHc-------cCCcEEEEE
Confidence 1 01 1111111111111 001 227999999997666666665533 479999999
Q ss_pred cCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCcchhhhhhcccCCcchh
Q 006091 328 HNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLH 407 (662)
Q Consensus 328 H~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~ 407 (662)
|+...... ..+.. .....+++..++.+|.++++|+..++.+.
T Consensus 104 h~~~~~~~------------~~~~~-----------------~~~~~~~~~~~~~ad~vi~~S~~~~~~l~--------- 145 (160)
T PF13579_consen 104 HGTLFRRG------------SRWKR-----------------RLYRWLERRLLRRADRVIVVSEAMRRYLR--------- 145 (160)
T ss_dssp SS-T------------------HHH-----------------HHHHHHHHHHHHH-SEEEESSHHHHHHHH---------
T ss_pred CCCchhhc------------cchhh-----------------HHHHHHHHHHHhcCCEEEECCHHHHHHHH---------
Confidence 97421100 01100 11134577888999999999999998885
Q ss_pred hhhccCCCceeEecCC
Q 006091 408 EILSSRKSVLNGITNG 423 (662)
Q Consensus 408 ~~~~~~~~ki~vIpnG 423 (662)
+ ++.+++++.|||||
T Consensus 146 ~-~g~~~~ri~vipnG 160 (160)
T PF13579_consen 146 R-YGVPPDRIHVIPNG 160 (160)
T ss_dssp H-H---GGGEEE----
T ss_pred H-hCCCCCcEEEeCcC
Confidence 3 55678899999998
No 103
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.38 E-value=1.7e-10 Score=125.79 Aligned_cols=295 Identities=17% Similarity=0.222 Sum_probs=192.5
Q ss_pred ccEEEeCCCCcchHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcc
Q 006091 291 KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTG 370 (662)
Q Consensus 291 pDVVh~h~~~~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 370 (662)
=|+|.+||++..++|.+++.+. +..++.+++|.. ||... .+..+.|
T Consensus 148 gDiIWVhDYhL~L~P~mlR~~~------~~~~IgfFlHiP-----fPssE---------vfr~lP~-------------- 193 (486)
T COG0380 148 GDIIWVHDYHLLLVPQMLRERI------PDAKIGFFLHIP-----FPSSE---------VFRCLPW-------------- 193 (486)
T ss_pred CCEEEEEechhhhhHHHHHHhC------CCceEEEEEeCC-----CCCHH---------HHhhCch--------------
Confidence 3999999999999999999886 688999999975 33332 2222211
Q ss_pred hhhhHHHHHHHhcCEEEecCcchhhhhhcc---cCC----cchhhh-hccCCCceeEecCCCCCCCCCCCCchhhcccCc
Q 006091 371 EAVNVLKGAIVTADRLLTVSKGYSWEITTV---EGG----YGLHEI-LSSRKSVLNGITNGIDITEWNPSSDEHIASHYS 442 (662)
Q Consensus 371 ~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~---~~~----~~l~~~-~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~ 442 (662)
+..+++ .+-.+|.|-+-++.+++.+... ..+ .+.... ...+..++..+|.|||+..|......
T Consensus 194 -r~eIl~-gll~~dligFqt~~y~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~------- 264 (486)
T COG0380 194 -REEILE-GLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKS------- 264 (486)
T ss_pred -HHHHHH-HhhcCCeeEecCHHHHHHHHHHHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcC-------
Confidence 112233 3457888888888877654321 000 000000 11233567888999998776432211
Q ss_pred ccccchhH-HhHHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccCC------CeEEEEEeCCC----hhhH
Q 006091 443 IDDLSGKV-QCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILAD------DIQFVMLGSGD----PQFE 511 (662)
Q Consensus 443 ~~~~~~~~-~~k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~------d~~lvivG~g~----~~~~ 511 (662)
... ....++++.++ .++.+|+.+-|++..||+..=+.|+++|++. ++.|+.++... +.|.
T Consensus 265 -----~~v~~~~~el~~~~~----~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~ 335 (486)
T COG0380 265 -----PSVQEKVLELKAELG----RNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQ 335 (486)
T ss_pred -----CchhhHHHHHHHHhc----CCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCccccHHHH
Confidence 000 12356677765 3478999999999999999999999999752 67788887643 2333
Q ss_pred HHHHHHHh-------hcC-CcE--EEEc--CCChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcC----CcEEEeCCc
Q 006091 512 SWMRDTEA-------TYK-DKY--RGWV--GFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYG----TIPVVHATG 575 (662)
Q Consensus 512 ~~~~~l~~-------~~~-~~~--~~~~--~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G----~PvVas~~g 575 (662)
.+...+.. .+. ..+ +.++ ..+.+++.++|..||+++.++..||..++..|+.+|. -+.|-|...
T Consensus 336 ~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFa 415 (486)
T COG0380 336 ALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFA 415 (486)
T ss_pred HHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhcCCCCcEEEeccc
Confidence 33333322 111 111 1111 1245667789999999999999999999999999983 366777776
Q ss_pred ccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHH
Q 006091 576 GLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEW 653 (662)
Q Consensus 576 g~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy~~ 653 (662)
|....+.+ .++++|.|.++++++|..+|+.. ++++++..+.. ....++..+.+..+++-...
T Consensus 416 Gaa~~L~~-------------AliVNP~d~~~va~ai~~AL~m~---~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 416 GAASELRD-------------ALIVNPWDTKEVADAIKRALTMS---LEERKERHEKLLKQVLTHDVARWANSFLDDLAQ 479 (486)
T ss_pred cchhhhcc-------------CEeECCCChHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 77666643 78999999999999999999863 33333222222 23567777777777665443
No 104
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=99.34 E-value=1.3e-10 Score=136.95 Aligned_cols=300 Identities=15% Similarity=0.126 Sum_probs=190.2
Q ss_pred cEEEeCCCCcchHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcch
Q 006091 292 CIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGE 371 (662)
Q Consensus 292 DVVh~h~~~~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (662)
|+|.+||+|..++|.+++.+. +.+++-+.+|.. ||.. +.+..+-|
T Consensus 203 d~VWVhDYhL~llP~~LR~~~------~~~~IgfFlHiP-----FPs~---------eifr~LP~--------------- 247 (854)
T PLN02205 203 DFVWIHDYHLMVLPTFLRKRF------NRVKLGFFLHSP-----FPSS---------EIYKTLPI--------------- 247 (854)
T ss_pred CEEEEeCchhhHHHHHHHhhC------CCCcEEEEecCC-----CCCh---------HHHhhCCc---------------
Confidence 899999999999999999876 789999999976 2332 22222111
Q ss_pred hhhHHHHHHHhcCEEEecCcchhhhhhcc---cCCc------chhh-hhccCCCceeEecCCCCCCCCCCCCchhhcccC
Q 006091 372 AVNVLKGAIVTADRLLTVSKGYSWEITTV---EGGY------GLHE-ILSSRKSVLNGITNGIDITEWNPSSDEHIASHY 441 (662)
Q Consensus 372 ~~~~~k~~~~~ad~ii~vS~~~~~~i~~~---~~~~------~l~~-~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~ 441 (662)
+.. +-..+-.||.|-+-+..+++.+.+. ..|- +... .+..+..++.+.|-|||...|......
T Consensus 248 r~e-iL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~------ 320 (854)
T PLN02205 248 REE-LLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL------ 320 (854)
T ss_pred HHH-HHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcC------
Confidence 112 2334567898888888877655431 0000 0000 011244467888999998766422110
Q ss_pred cccccchhHHhHHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--C----CeEEEEEeCCC----hhhH
Q 006091 442 SIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D----DIQFVMLGSGD----PQFE 511 (662)
Q Consensus 442 ~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~----d~~lvivG~g~----~~~~ 511 (662)
.+......+++++++- +++.+|+-+.|++..||+..=+.|++++.+ + ++.|+.+..-. +.|.
T Consensus 321 -----~~~~~~~~~l~~~~~~---~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~ 392 (854)
T PLN02205 321 -----PETEAKVKELIKQFCD---QDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVK 392 (854)
T ss_pred -----hhHHHHHHHHHHHhcc---CCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHH
Confidence 0111223456776652 256799999999999999999999999865 2 56777776422 2333
Q ss_pred HHHHHHH---hhcCCcE-------EEE--cCCChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCC------------
Q 006091 512 SWMRDTE---ATYKDKY-------RGW--VGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGT------------ 567 (662)
Q Consensus 512 ~~~~~l~---~~~~~~~-------~~~--~~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~------------ 567 (662)
++...+. ...+.++ +.+ -.++.+++.++|..||+++.++..+|..|+..|+.+|..
T Consensus 393 ~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~ 472 (854)
T PLN02205 393 EVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLE 472 (854)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccc
Confidence 3332222 2111111 112 223556667899999999999999999999999999853
Q ss_pred -------cEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHHhcCCH
Q 006091 568 -------IPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTW 640 (662)
Q Consensus 568 -------PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~~~~~fs~ 640 (662)
.+|.|..-|....+. ..++|+|.|.+++|++|.+++....+.+..+-+...+ ....++.
T Consensus 473 ~~~~~~gvLiLSEfaGaa~~L~-------------~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~-~v~~~d~ 538 (854)
T PLN02205 473 PSTPKKSMLVVSEFIGCSPSLS-------------GAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYR-YVSTHDV 538 (854)
T ss_pred cccCCCCceEeeeccchhHHhC-------------cCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH-HHhhCCH
Confidence 255566555555442 3689999999999999999998642222222221222 3456777
Q ss_pred HHHHHHHHHHHHHhh
Q 006091 641 ENAAIQYEQVFEWAS 655 (662)
Q Consensus 641 e~~a~~~~~iy~~~~ 655 (662)
..-++.+++-.+.+.
T Consensus 539 ~~W~~~fl~~l~~~~ 553 (854)
T PLN02205 539 GYWARSFLQDLERTC 553 (854)
T ss_pred HHHHHHHHHHHHHHH
Confidence 777777776655543
No 105
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.17 E-value=3.3e-08 Score=106.42 Aligned_cols=185 Identities=16% Similarity=0.154 Sum_probs=105.0
Q ss_pred CCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEEEEEecCCCccCH-HHHHHHHHh
Q 006091 414 KSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGI-DLIRLAAPE 492 (662)
Q Consensus 414 ~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~-d~Ll~A~~~ 492 (662)
++++.+.-|.|........ +...++.++++ +++++|+.+|--.-.+.+ +.+.+++..
T Consensus 153 ~~k~~~tG~Pvr~~~~~~~--------------------~~~~~~~~~l~--~~~~~iLv~GGS~Ga~~in~~~~~~l~~ 210 (352)
T PRK12446 153 KEKVIYTGSPVREEVLKGN--------------------REKGLAFLGFS--RKKPVITIMGGSLGAKKINETVREALPE 210 (352)
T ss_pred CCCeEEECCcCCccccccc--------------------chHHHHhcCCC--CCCcEEEEECCccchHHHHHHHHHHHHh
Confidence 4577777777765432211 23456677776 667777766543334455 334445555
Q ss_pred ccCCCeEEEEE-eCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEE
Q 006091 493 ILADDIQFVML-GSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVV 571 (662)
Q Consensus 493 l~~~d~~lviv-G~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVa 571 (662)
+.. +++++++ |.. .++..... .. .+. ..+|-.+.+..+|+.||+++.- +-++++.|++++|+|.|.
T Consensus 211 l~~-~~~vv~~~G~~--~~~~~~~~----~~-~~~-~~~f~~~~m~~~~~~adlvIsr----~G~~t~~E~~~~g~P~I~ 277 (352)
T PRK12446 211 LLL-KYQIVHLCGKG--NLDDSLQN----KE-GYR-QFEYVHGELPDILAITDFVISR----AGSNAIFEFLTLQKPMLL 277 (352)
T ss_pred hcc-CcEEEEEeCCc--hHHHHHhh----cC-CcE-EecchhhhHHHHHHhCCEEEEC----CChhHHHHHHHcCCCEEE
Confidence 533 4776654 543 23332222 11 111 2344434466899999988854 346789999999999999
Q ss_pred eCCc-c--------cccccccccccccCCCCccceEEECC--CCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHHhcCCH
Q 006091 572 HATG-G--------LRDTVENFNPFAREGSGEGTGWSFLP--LSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTW 640 (662)
Q Consensus 572 s~~g-g--------~~eii~~~~~~~~~~~~~~~G~l~~~--~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~~~~~fs~ 640 (662)
.... . ..+.+.+ .+.+..+.. .+++.++++|.+++. |++.+++.. +.+..
T Consensus 278 iP~~~~~~~~~Q~~Na~~l~~----------~g~~~~l~~~~~~~~~l~~~l~~ll~----~~~~~~~~~-----~~~~~ 338 (352)
T PRK12446 278 IPLSKFASRGDQILNAESFER----------QGYASVLYEEDVTVNSLIKHVEELSH----NNEKYKTAL-----KKYNG 338 (352)
T ss_pred EcCCCCCCCchHHHHHHHHHH----------CCCEEEcchhcCCHHHHHHHHHHHHc----CHHHHHHHH-----HHcCC
Confidence 7432 1 1123333 355666543 357888888887765 665554322 23445
Q ss_pred HHHHHHHHHHHH
Q 006091 641 ENAAIQYEQVFE 652 (662)
Q Consensus 641 e~~a~~~~~iy~ 652 (662)
.+.+++..+++.
T Consensus 339 ~~aa~~i~~~i~ 350 (352)
T PRK12446 339 KEAIQTIIDHIS 350 (352)
T ss_pred CCHHHHHHHHHH
Confidence 555665555443
No 106
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=99.15 E-value=8.4e-10 Score=124.89 Aligned_cols=417 Identities=18% Similarity=0.143 Sum_probs=250.3
Q ss_pred cCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcc---------------c-----CceeEEeecCCc---
Q 006091 167 TGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKD---------------L-----GCCMKICCFGGE--- 223 (662)
Q Consensus 167 ~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~---------------~-----~~~~~v~~~~~~--- 223 (662)
.||+|+.+....+.++..|...+.++..|..+...+. ....++ . ....++++.+..
T Consensus 114 gGGLGrLAgcfldS~a~Lg~P~~G~Gl~Y~~GyF~Q~-~~dG~Q~E~p~~w~~~~~pwe~~r~~~a~~~d~~V~g~~~~~ 192 (750)
T COG0058 114 GGGLGRLAGCFLDSAADLGLPLTGYGLRYRYGYFRQS-DVDGWQVELPDEWLKYGNPWEFLRDAEGVPYDVPVPGYDNRV 192 (750)
T ss_pred cccHHHHHHhHHHHHHhcCCCceEEEeeecCCceeee-ccCCceEecchhhhccCCcceeecccCCceeeeeEEeccCcE
Confidence 5999999999999999999999999998888766333 111111 1 134445554433
Q ss_pred eEEEEEEEeeCCceEEEEeCCCC-----CC--CCCCCCCCCCCCCchhHHHHHHHHHHhhhcccc-CCCCCCCCCccEEE
Q 006091 224 QEIAFFHEYREGVDWVFVDHPSY-----HR--PGNPYGDINGAFGDNQFRYTLLCYAACEAPLVL-PLGGFTYGEKCIFL 295 (662)
Q Consensus 224 ~~~~~~~~~~~gv~v~~i~~~~~-----~~--~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~~f~~~~pDVVh 295 (662)
.....|......+++++.+...- .+ ...+|++.. -.-.+.+...+..+.++.+... ....- ..++.+.|
T Consensus 193 ~~lrlW~a~~~~~~~~l~~~n~~e~~~~~~~iT~~LYp~Ds--~elRl~Qeyfl~~agvq~I~~~~~~~~~-~~~~~~~~ 269 (750)
T COG0058 193 VTLRLWQAQVGRVPLYLLDFNVGENKNDARNITRVLYPGDS--KELRLKQEYFLGSAGVQDILARGHLEHH-DLDVLADH 269 (750)
T ss_pred EEEEEEEEecCccceEeecCCCcccchhhhhHHhhcCCCCc--HHHHHhhhheeeeHHHHHHHHHhhhccc-cccchhhh
Confidence 44556666666667777764321 11 112454321 0011222233444444443332 11111 12567788
Q ss_pred eCCCCcchHHHHHHh-hcCCCCC-------CCCCcEEEEecCCCCCC--CCChhhhhhcCC-Chhh--------hccccc
Q 006091 296 VNDWHAGLVPVLLAS-KYRPHGV-------YKDARSILVIHNLSHQG--VEPAATYKNLGL-PSEW--------YGALEW 356 (662)
Q Consensus 296 ~h~~~~~l~~~ll~~-~~~~~~~-------~~gip~v~tiH~~~~~~--~~~~~~~~~~~l-~~~~--------~~~~~~ 356 (662)
.|+-|++++..-+-+ ..-..++ ....-+++|.|++-..+ .||...+..+.. .... ......
T Consensus 270 lNdtHpa~~i~ElmRll~d~~g~~~~~A~~~~~~~~~yTnHTplpeale~wp~~l~~~~lpr~~~ii~~in~~~l~~~~~ 349 (750)
T COG0058 270 LNDTHPALAIPELMRLLIDEEGLSWDEAWEIVRKTFVYTNHTPLPEALETWPVELFKKLLPRHLQIIYEINARFLPEVRL 349 (750)
T ss_pred hcCCChhHhHHHHHHHHHHHhcCCHHHHHHHHhheeeeecCCCchhhhccCCHHHHHHHhhhhhhhHHHHHhhhhHHHHh
Confidence 999888776654433 1100000 12356789999985444 355544433210 0000 001111
Q ss_pred cccc--cccccccCcchhhhHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCc
Q 006091 357 VFPT--WARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSD 434 (662)
Q Consensus 357 ~~~~--~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~ 434 (662)
.++. ..+... -..++|...++..|..+..||+-+.+.+.+... ..+....+.++.-++|||....|-....
T Consensus 350 ~~~~~~~~~~~~---i~~v~Ma~lal~~S~~vNGVsklH~el~k~~~~----~~~~~~~p~~i~nvTNGIt~rrWl~~~n 422 (750)
T COG0058 350 LYLGDLIRRGSP---IEEVNMAVLALVGSHSVNGVSKLHSELSKKMWF----ADFHGLYPEKINNVTNGITPRRWLAPAN 422 (750)
T ss_pred hccccccccCCc---ccceehhhhhhhhhhhhHhHHHHHHHHHHHHHH----HHhcccCccccccccCCcCCchhhhhhh
Confidence 1100 111111 111677788888999999999988877654322 2233345788999999999988865444
Q ss_pred hhhcccCcccc----------c-----------------chhHHhHH----HHHHHhCCCCCCCCCEEEEEecCCCccCH
Q 006091 435 EHIASHYSIDD----------L-----------------SGKVQCKI----ALQKELGLPIRPDCPLIGFIGRLDYQKGI 483 (662)
Q Consensus 435 ~~i~~~~~~~~----------~-----------------~~~~~~k~----~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~ 483 (662)
+.+..-+.... + .-|..+|. ....+.|+..+++...++++-|+..+|+.
T Consensus 423 ~~L~~~~~~~ig~~W~~~~~~l~~l~~~a~~~~~~e~i~~iK~~nk~~La~~i~~~~gi~~~p~~lfd~~~kRiheYKRq 502 (750)
T COG0058 423 PGLADLLDEKIGDEWLNDLDILDELLWFADDKAFRELIAEIKRENKKRLAEEIADRTGIEVDPNALFDGQARRIHEYKRQ 502 (750)
T ss_pred HHHHHHHhhhhhhhhhhhhhhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhhhcCCccCCCcceeeeehhhhhhhhh
Confidence 43333222210 0 01223332 34445678888899999999999999998
Q ss_pred HHHHHHHHhc----cC---CCeEEEEEeCCChhhH------HHHHHHHhhc--CCcEEEEcCCChHHHHHHHHhcCEEEE
Q 006091 484 DLIRLAAPEI----LA---DDIQFVMLGSGDPQFE------SWMRDTEATY--KDKYRGWVGFNVPISHRITAGCDILLM 548 (662)
Q Consensus 484 d~Ll~A~~~l----~~---~d~~lvivG~g~~~~~------~~~~~l~~~~--~~~~~~~~~~~~~~~~~ll~~aDi~v~ 548 (662)
.+.+.-+..+ ++ +.+++++.|...|.+. .++...++.. ..+++....|+......++.+|||-..
T Consensus 503 ~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~nYdvslA~~iipa~Dvweq 582 (750)
T COG0058 503 LLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLPNYDVSLAELLIPAADVWEQ 582 (750)
T ss_pred HHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeCCCChhHHHhhccccccccc
Confidence 8866544443 32 3577788888655332 2222222222 346777777888888889999999999
Q ss_pred cCC--CCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECC
Q 006091 549 PSR--FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLP 602 (662)
Q Consensus 549 PS~--~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~ 602 (662)
.|+ .|++|.+-|.||..|.+.|+|--|...|+.+. -+++|||+|-.
T Consensus 583 is~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~--------vg~~N~~~fG~ 630 (750)
T COG0058 583 IPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEH--------VGGENGWIFGE 630 (750)
T ss_pred CCCCCccccCcCcchHHhcCCceeeccccHHHHHHHh--------cCCCceEEeCC
Confidence 987 59999999999999999999999999999973 12789999943
No 107
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.12 E-value=3e-10 Score=97.59 Aligned_cols=89 Identities=22% Similarity=0.320 Sum_probs=80.6
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHH
Q 006091 545 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKS 624 (662)
Q Consensus 545 i~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~ 624 (662)
+.+.|+..++++..++|+||||+|+|+.+.+++.+++.+ +.++++++ |++++.++|..+++ |++
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~----------~~~~~~~~--~~~el~~~i~~ll~----~~~ 64 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFED----------GEHIITYN--DPEELAEKIEYLLE----NPE 64 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCC----------CCeEEEEC--CHHHHHHHHHHHHC----CHH
Confidence 467788889999999999999999999999999999988 77899987 89999999999887 899
Q ss_pred HHHHHHHHH---HHhcCCHHHHHHHHHH
Q 006091 625 SWEGLMRRG---MEKDYTWENAAIQYEQ 649 (662)
Q Consensus 625 ~~~~l~~~~---~~~~fs~e~~a~~~~~ 649 (662)
+++++++++ +.++|+|++.++++++
T Consensus 65 ~~~~ia~~a~~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 65 ERRRIAKNARERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHC
Confidence 999999988 5789999999999863
No 108
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=99.08 E-value=3.4e-09 Score=102.22 Aligned_cols=183 Identities=20% Similarity=0.228 Sum_probs=113.4
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEE
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 231 (662)
.||++|.....| ..-||.++++.+|+..|+++||+|+|.|........ ..
T Consensus 2 kkIaIiGtrGIP-a~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~-----------------------------~~ 51 (185)
T PF09314_consen 2 KKIAIIGTRGIP-ARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYK-----------------------------EF 51 (185)
T ss_pred ceEEEEeCCCCC-cccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCC-----------------------------Cc
Confidence 479999999888 468999999999999999999999999976321110 12
Q ss_pred eeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCC-cchHHHHHHh
Q 006091 232 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWH-AGLVPVLLAS 310 (662)
Q Consensus 232 ~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~-~~l~~~ll~~ 310 (662)
...|++++.++.+..- .. ....|..++ +..++...+.. ..+.||||++... ++++..+++.
T Consensus 52 ~y~gv~l~~i~~~~~g----~~---------~si~yd~~s--l~~al~~~~~~---~~~~~ii~ilg~~~g~~~~~~~r~ 113 (185)
T PF09314_consen 52 EYNGVRLVYIPAPKNG----SA---------ESIIYDFLS--LLHALRFIKQD---KIKYDIILILGYGIGPFFLPFLRK 113 (185)
T ss_pred ccCCeEEEEeCCCCCC----ch---------HHHHHHHHH--HHHHHHHHhhc---cccCCEEEEEcCCccHHHHHHHHh
Confidence 2368888877654311 00 112222222 11111101000 1146899999877 4555555544
Q ss_pred hcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecC
Q 006091 311 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 390 (662)
Q Consensus 311 ~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS 390 (662)
..+ .|.|+++++|.+++. + ++|.+.. .......++.+++.||.+|+.|
T Consensus 114 ~~~-----~g~~v~vN~DGlEWk----R--------------------~KW~~~~---k~~lk~~E~~avk~ad~lIaDs 161 (185)
T PF09314_consen 114 LRK-----KGGKVVVNMDGLEWK----R--------------------AKWGRPA---KKYLKFSEKLAVKYADRLIADS 161 (185)
T ss_pred hhh-----cCCcEEECCCcchhh----h--------------------hhcCHHH---HHHHHHHHHHHHHhCCEEEEcC
Confidence 332 478999999987411 1 1111100 0111234677889999999999
Q ss_pred cchhhhhhcccCCcchhhhhccCCCceeEecCCCC
Q 006091 391 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGID 425 (662)
Q Consensus 391 ~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd 425 (662)
+.+++.+.+ .++ ..+..+|++|.|
T Consensus 162 ~~I~~y~~~---------~y~--~~~s~~IaYGad 185 (185)
T PF09314_consen 162 KGIQDYIKE---------RYG--RKKSTFIAYGAD 185 (185)
T ss_pred HHHHHHHHH---------HcC--CCCcEEecCCCC
Confidence 999988864 222 367889999986
No 109
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.05 E-value=2.9e-07 Score=98.66 Aligned_cols=331 Identities=14% Similarity=0.048 Sum_probs=181.5
Q ss_pred cCcHHHHHhhHHHHHHhCCCc-EEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEeeCCceEEEEeCCC
Q 006091 167 TGGLGDVCGSLPVALAARGHR-VMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPS 245 (662)
Q Consensus 167 ~GG~~~~~~~La~~L~~~Ghe-V~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~gv~v~~i~~~~ 245 (662)
+||=-.-...++.+|.++|++ |.++........ +.....++.++.++...
T Consensus 10 TGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~~e~-----------------------------~l~~~~~~~~~~I~~~~ 60 (357)
T COG0707 10 TGGHVFPALALAEELAKRGWEQVIVLGTGDGLEA-----------------------------FLVKQYGIEFELIPSGG 60 (357)
T ss_pred CccchhHHHHHHHHHHhhCccEEEEeccccccee-----------------------------eeccccCceEEEEeccc
Confidence 566666788999999999996 555532211100 01112367777777655
Q ss_pred CCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHhhcCCCCCCCCCcEEE
Q 006091 246 YHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSIL 325 (662)
Q Consensus 246 ~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~~~~~~~~~gip~v~ 325 (662)
+.+.. .+ .++.....+.....++...++ ..+||+|..-.......+.+.+.. .++|+++
T Consensus 61 ~~~~~-~~--------~~~~~~~~~~~~~~~a~~il~-----~~kPd~vig~Ggyvs~P~~~Aa~~-------~~iPv~i 119 (357)
T COG0707 61 LRRKG-SL--------KLLKAPFKLLKGVLQARKILK-----KLKPDVVIGTGGYVSGPVGIAAKL-------LGIPVII 119 (357)
T ss_pred ccccC-cH--------HHHHHHHHHHHHHHHHHHHHH-----HcCCCEEEecCCccccHHHHHHHh-------CCCCEEE
Confidence 43321 11 122222222223222222111 227999998665555545555544 4799998
Q ss_pred EecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecCcchhhhhhcccCCcc
Q 006091 326 VIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYG 405 (662)
Q Consensus 326 tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~ 405 (662)
...|.. + |+.. +...+.++.|.+.-+...
T Consensus 120 hEqn~~-----~-------G~an----------------------------k~~~~~a~~V~~~f~~~~----------- 148 (357)
T COG0707 120 HEQNAV-----P-------GLAN----------------------------KILSKFAKKVASAFPKLE----------- 148 (357)
T ss_pred EecCCC-----c-------chhH----------------------------HHhHHhhceeeecccccc-----------
Confidence 777642 1 1111 112345666655433201
Q ss_pred hhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEEEEEe-cCCCccCHH
Q 006091 406 LHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIG-RLDYQKGID 484 (662)
Q Consensus 406 l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il~vG-rl~~~Kg~d 484 (662)
-..+.+++.+.-|.|..+... .. ....+.... .++++|+.+| .....+=-+
T Consensus 149 ----~~~~~~~~~~tG~Pvr~~~~~-~~-------------------~~~~~~~~~----~~~~~ilV~GGS~Ga~~ln~ 200 (357)
T COG0707 149 ----AGVKPENVVVTGIPVRPEFEE-LP-------------------AAEVRKDGR----LDKKTILVTGGSQGAKALND 200 (357)
T ss_pred ----ccCCCCceEEecCcccHHhhc-cc-------------------hhhhhhhcc----CCCcEEEEECCcchhHHHHH
Confidence 012345677888888765543 11 112222222 2567776665 444444223
Q ss_pred HHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHH
Q 006091 485 LIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMR 564 (662)
Q Consensus 485 ~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma 564 (662)
.+.++...+.+ +++++...+-+. .++........ .. ....+|.++ +..+|+.||+++.=+ =++++-|..+
T Consensus 201 ~v~~~~~~l~~-~~~v~~~~G~~~-~~~~~~~~~~~-~~--~~v~~f~~d-m~~~~~~ADLvIsRa----Ga~Ti~E~~a 270 (357)
T COG0707 201 LVPEALAKLAN-RIQVIHQTGKND-LEELKSAYNEL-GV--VRVLPFIDD-MAALLAAADLVISRA----GALTIAELLA 270 (357)
T ss_pred HHHHHHHHhhh-CeEEEEEcCcch-HHHHHHHHhhc-Cc--EEEeeHHhh-HHHHHHhccEEEeCC----cccHHHHHHH
Confidence 34444445543 577666544332 44444443332 22 334455554 568999999998543 3589999999
Q ss_pred cCCcEEEeCCccc--------ccccccccccccCCCCccceEEECCCC--HHHHHHHHHHHHHHhhhCHHHHHHHHHHHH
Q 006091 565 YGTIPVVHATGGL--------RDTVENFNPFAREGSGEGTGWSFLPLS--EESMLTALRFAIRTYREHKSSWEGLMRRGM 634 (662)
Q Consensus 565 ~G~PvVas~~gg~--------~eii~~~~~~~~~~~~~~~G~l~~~~d--~~~la~aI~~~l~~~~~~~~~~~~l~~~~~ 634 (662)
+|+|.|--..+.. +..+.+ .+.|.+++..+ ++.+.+.|.++++ +++.+.+|+.++.
T Consensus 271 ~g~P~IliP~p~~~~~~Q~~NA~~l~~----------~gaa~~i~~~~lt~~~l~~~i~~l~~----~~~~l~~m~~~a~ 336 (357)
T COG0707 271 LGVPAILVPYPPGADGHQEYNAKFLEK----------AGAALVIRQSELTPEKLAELILRLLS----NPEKLKAMAENAK 336 (357)
T ss_pred hCCCEEEeCCCCCccchHHHHHHHHHh----------CCCEEEeccccCCHHHHHHHHHHHhc----CHHHHHHHHHHHH
Confidence 9999999654422 233444 56677776655 7888888888876 7888899888763
Q ss_pred HhcCCHHHHHHHHHHHHH
Q 006091 635 EKDYTWENAAIQYEQVFE 652 (662)
Q Consensus 635 ~~~fs~e~~a~~~~~iy~ 652 (662)
...-.+.++++.+...
T Consensus 337 --~~~~p~aa~~i~~~~~ 352 (357)
T COG0707 337 --KLGKPDAAERIADLLL 352 (357)
T ss_pred --hcCCCCHHHHHHHHHH
Confidence 3333344444444443
No 110
>PRK14986 glycogen phosphorylase; Provisional
Probab=99.05 E-value=7.4e-08 Score=110.66 Aligned_cols=299 Identities=16% Similarity=0.155 Sum_probs=185.8
Q ss_pred CccEEEeCCCCcchHHHHHHhhc-CCCCC-------CCCCcEEEEecCCCCCC--CCChhhhhhcCCC---------hhh
Q 006091 290 EKCIFLVNDWHAGLVPVLLASKY-RPHGV-------YKDARSILVIHNLSHQG--VEPAATYKNLGLP---------SEW 350 (662)
Q Consensus 290 ~pDVVh~h~~~~~l~~~ll~~~~-~~~~~-------~~gip~v~tiH~~~~~~--~~~~~~~~~~~l~---------~~~ 350 (662)
++-++|.|+-|++++.+-+-+.+ ..+++ ....-+++|-|++-..+ .||...+..+... .++
T Consensus 313 ~~v~ihlNDtHpa~~i~ElmR~L~d~~gl~~~eA~~iv~~~~~fTnHT~lpealE~w~~~l~~~~lpr~l~Ii~eIn~~f 392 (815)
T PRK14986 313 DKIAIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYF 392 (815)
T ss_pred cccEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhEEeecccCChHHhCcCCHHHHHHHccHhhhHHHHHHHHH
Confidence 46799999999876665444321 10000 12457899999985443 4555555433211 011
Q ss_pred hcccccccc----ccccccccCc--chhhhHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCC
Q 006091 351 YGALEWVFP----TWARTHALDT--GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGI 424 (662)
Q Consensus 351 ~~~~~~~~~----~~~~~~~~~~--~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGv 424 (662)
...+...++ ...++..+.. ...++|...++..|..+-.||.-+.+.+.+..+ ..++...+.++.-|+|||
T Consensus 393 l~~~~~~~~~~~~~~~~~sii~~~~~~~v~Ma~LAl~~S~~vNGVS~lH~evl~~~~f----~df~~l~P~kf~niTNGV 468 (815)
T PRK14986 393 LKTLQEQYPNDTDLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLF----ADFAKIFPGRFCNVTNGV 468 (815)
T ss_pred HHHHHHhCCCcHHHHhhhhccccCCCCEEeeHHHHhhccchhhHHHHHHHHHHHHHHH----HHHHhhCCCcccccCCCC
Confidence 111111110 0122211121 225788888999999999999877766543221 223334567788899999
Q ss_pred CCCCCCCCCchhhcc--------cCc--------------ccc----c-chhHHhHH----HHHHHhCCCCCCCCCEEEE
Q 006091 425 DITEWNPSSDEHIAS--------HYS--------------IDD----L-SGKVQCKI----ALQKELGLPIRPDCPLIGF 473 (662)
Q Consensus 425 d~~~~~~~~~~~i~~--------~~~--------------~~~----~-~~~~~~k~----~~r~~lgl~~~~~~~~Il~ 473 (662)
....|-...++.+.. .+. .++ + .-|..+|. -++++.|+..+++...+++
T Consensus 469 ~~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~d~~f~~~l~~vk~~nK~~L~~~i~~~~g~~ldp~sLfd~q 548 (815)
T PRK14986 469 TPRRWLALANPSLSAVLDEHIGRTWRTDLSQLSELKQHCDYPMVNHAVRQAKLENKKRLAEYIAQQLNVVVNPKALFDVQ 548 (815)
T ss_pred ChhhHhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCcccceeee
Confidence 987775311111110 110 001 0 11333333 3555779888899999999
Q ss_pred EecCCCccCHHH-HHHHHHh---ccC-C-----CeEEEEEeCCChhhH------HHHHHHHh------hcC--CcEEEEc
Q 006091 474 IGRLDYQKGIDL-IRLAAPE---ILA-D-----DIQFVMLGSGDPQFE------SWMRDTEA------TYK--DKYRGWV 529 (662)
Q Consensus 474 vGrl~~~Kg~d~-Ll~A~~~---l~~-~-----d~~lvivG~g~~~~~------~~~~~l~~------~~~--~~~~~~~ 529 (662)
+-|+..+|+..+ ++..+.. +++ + +.++++.|...|.+. .++-.++. ... .+++...
T Consensus 549 akR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~~~lkVVFle 628 (815)
T PRK14986 549 IKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIP 628 (815)
T ss_pred ehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhhcCceeEEEeC
Confidence 999999999999 6666544 433 1 578999998655332 22222233 111 2677677
Q ss_pred CCChHHHHHHHHhcCEEEEcCC--CCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEE
Q 006091 530 GFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSF 600 (662)
Q Consensus 530 ~~~~~~~~~ll~~aDi~v~PS~--~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~ 600 (662)
.|+-.....++++|||....|+ .|++|.+-|-||..|.+.++|--|...|+.++. +++|||.|
T Consensus 629 nY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~v--------G~eN~~~f 693 (815)
T PRK14986 629 NYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHV--------GEENIFIF 693 (815)
T ss_pred CCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhc--------CCCcEEEe
Confidence 7888888899999999999997 599999999999999999999999999988741 14577776
No 111
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=98.94 E-value=1.6e-08 Score=111.13 Aligned_cols=178 Identities=13% Similarity=0.086 Sum_probs=127.8
Q ss_pred HhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHh
Q 006091 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKEL 460 (662)
Q Consensus 381 ~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~l 460 (662)
.+.|.||+.++...+.+.. .++ +..++.++|-|+=.. .....
T Consensus 238 ~~~~~iIv~T~~q~~di~~---------r~~-~~~~~~~ip~g~i~~---~~~~~------------------------- 279 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKE---------LLD-NEYQEQISQLGYLYP---FKKDN------------------------- 279 (438)
T ss_pred cccCeEEeCCHHHHHHHHH---------HhC-cccCceEEEEEEEEe---ecccc-------------------------
Confidence 4678899888775665542 122 234667777776421 11100
Q ss_pred CCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHH
Q 006091 461 GLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHR 538 (662)
Q Consensus 461 gl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 538 (662)
.....+++++. +..+++++.|.+ |+++|-| |.+. ++...+.++ ..+ .+++.+.++....+.+
T Consensus 280 -----r~~~~~l~~t~-------s~~I~~i~~Lv~~lPd~~f~I-ga~t-e~s~kL~~L-~~y-~nvvly~~~~~~~l~~ 343 (438)
T TIGR02919 280 -----KYRKQALILTN-------SDQIEHLEEIVQALPDYHFHI-AALT-EMSSKLMSL-DKY-DNVKLYPNITTQKIQE 343 (438)
T ss_pred -----CCcccEEEECC-------HHHHHHHHHHHHhCCCcEEEE-EecC-cccHHHHHH-Hhc-CCcEEECCcChHHHHH
Confidence 12344556662 888898888855 7999999 7775 334555555 344 5677788877756779
Q ss_pred HHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCc-ccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 539 ITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG-GLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 539 ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~g-g~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
+|..||+++..|..|+++++++||+..|+|+|+.+.- |..+++. .|.+++.+++++|+++|.+++.
T Consensus 344 ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~-------------~g~l~~~~~~~~m~~~i~~lL~ 410 (438)
T TIGR02919 344 LYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIA-------------SENIFEHNEVDQLISKLKDLLN 410 (438)
T ss_pred HHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCccccc-------------CCceecCCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999998644 4445553 2889999999999999999987
Q ss_pred HhhhCHHHHHHH
Q 006091 618 TYREHKSSWEGL 629 (662)
Q Consensus 618 ~~~~~~~~~~~l 629 (662)
+++.+++.
T Consensus 411 ----d~~~~~~~ 418 (438)
T TIGR02919 411 ----DPNQFREL 418 (438)
T ss_pred ----CHHHHHHH
Confidence 77655553
No 112
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=98.89 E-value=1.7e-07 Score=107.47 Aligned_cols=290 Identities=18% Similarity=0.158 Sum_probs=184.2
Q ss_pred CccEEEeCCCCcchHHHHHHhh-cCCCCC-------CCCCcEEEEecCCCCCC--CCChhhhhhcCC---------Chhh
Q 006091 290 EKCIFLVNDWHAGLVPVLLASK-YRPHGV-------YKDARSILVIHNLSHQG--VEPAATYKNLGL---------PSEW 350 (662)
Q Consensus 290 ~pDVVh~h~~~~~l~~~ll~~~-~~~~~~-------~~gip~v~tiH~~~~~~--~~~~~~~~~~~l---------~~~~ 350 (662)
++.+||.|+-|++++.+-+-+. ...+++ ....-+++|-|++-..+ .||...+..+-. ..++
T Consensus 297 ~~~~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~wp~~l~~~~Lpr~~~iI~~In~~f 376 (794)
T TIGR02093 297 KKVAIQLNDTHPALAIPELMRLLIDEEGMDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEINRRF 376 (794)
T ss_pred cceEEEecCCchHHHHHHHHHHHHHhcCCCHHHHHHHHHhheecccCCCChHHhCCcCHHHHHHHHhHHHHHHHHHhHHH
Confidence 6899999998887666544432 110000 12357899999985443 455555543221 1111
Q ss_pred hcccccccc----ccccccccCc--chhhhHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCC
Q 006091 351 YGALEWVFP----TWARTHALDT--GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGI 424 (662)
Q Consensus 351 ~~~~~~~~~----~~~~~~~~~~--~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGv 424 (662)
.......+| ...++..+.. ...++|...++..|..|-.||+-+.+.+++..+ ..++..-+.++.-++|||
T Consensus 377 l~~~~~~~p~d~~~~~~~sii~~~~~~~v~Ma~LAi~~S~~vNGVS~lH~eilk~~~~----~df~~l~P~kf~n~TNGV 452 (794)
T TIGR02093 377 LAELAAKGPGDEAKIRRMSIIEEGQSKRVRMANLAIVGSHSVNGVAALHTELLKEDLL----KDFYELYPEKFNNKTNGI 452 (794)
T ss_pred HHHHHHhCCCcHHHHhheeeeecCCCCEEehHHHHHHhhhhhhhhHHHHHHHHHHHHH----HHHHhhCCCccCCcCCCC
Confidence 111111111 1222222332 235789999999999999999888876653221 223345567888999999
Q ss_pred CCCCCCCCCchhhcccCc--------------------ccc------c-chhHHhHH----HHHHHhCCCCCCCCCEEEE
Q 006091 425 DITEWNPSSDEHIASHYS--------------------IDD------L-SGKVQCKI----ALQKELGLPIRPDCPLIGF 473 (662)
Q Consensus 425 d~~~~~~~~~~~i~~~~~--------------------~~~------~-~~~~~~k~----~~r~~lgl~~~~~~~~Il~ 473 (662)
....|-...++.+..-+. ++| + .-|..+|. -++++.|+..+++...+++
T Consensus 453 t~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq 532 (794)
T TIGR02093 453 TPRRWLRLANPGLSALLTETIGDDWLTDLDLLKKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSIFDVQ 532 (794)
T ss_pred CccchhhhcCHHHHHHHHHhcCchhhhcHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccccchhh
Confidence 998775222221111100 011 1 12334443 3556778888899999999
Q ss_pred EecCCCccCHHH-HHHHHHh---ccC-C-----CeEEEEEeCCChhhH------HHHHHHHhh------c--CCcEEEEc
Q 006091 474 IGRLDYQKGIDL-IRLAAPE---ILA-D-----DIQFVMLGSGDPQFE------SWMRDTEAT------Y--KDKYRGWV 529 (662)
Q Consensus 474 vGrl~~~Kg~d~-Ll~A~~~---l~~-~-----d~~lvivG~g~~~~~------~~~~~l~~~------~--~~~~~~~~ 529 (662)
+-|+..+|+..+ ++..+.. +++ + +.++++.|...|.+. +++..++.. . ..+++..-
T Consensus 533 ~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~lkVVFle 612 (794)
T TIGR02093 533 VKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLKVVFVP 612 (794)
T ss_pred heechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhCCceeEEEeC
Confidence 999999999998 6665544 433 2 568888898755433 222223322 1 12677677
Q ss_pred CCChHHHHHHHHhcCEEEEcCC--CCCCcHHHHHHHHcCCcEEEeCCccccccccc
Q 006091 530 GFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRDTVEN 583 (662)
Q Consensus 530 ~~~~~~~~~ll~~aDi~v~PS~--~E~fgl~~lEAma~G~PvVas~~gg~~eii~~ 583 (662)
.|+-.....++.+|||....|+ .|++|.+-|.+|..|.+.++|--|...|+.++
T Consensus 613 nY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~ 668 (794)
T TIGR02093 613 NYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREE 668 (794)
T ss_pred CCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHH
Confidence 7888888899999999999997 59999999999999999999999998888865
No 113
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=98.87 E-value=2.7e-07 Score=105.68 Aligned_cols=298 Identities=18% Similarity=0.156 Sum_probs=185.5
Q ss_pred CccEEEeCCCCcchHHHHHHhh-cCCCCC-------CCCCcEEEEecCCCCCC--CCChhhhhhcCCCh-hhhccc----
Q 006091 290 EKCIFLVNDWHAGLVPVLLASK-YRPHGV-------YKDARSILVIHNLSHQG--VEPAATYKNLGLPS-EWYGAL---- 354 (662)
Q Consensus 290 ~pDVVh~h~~~~~l~~~ll~~~-~~~~~~-------~~gip~v~tiH~~~~~~--~~~~~~~~~~~l~~-~~~~~~---- 354 (662)
++.+||.|+-|++++.+-+-+. ...+++ ....-+++|-|++-..+ .||...+..+.... ..+..+
T Consensus 302 ~~~~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~w~~~l~~~~Lpr~~~ii~~in~~f 381 (798)
T PRK14985 302 DYEVIQLNDTHPTIAIPELLRVLLDEHQLSWDDAWAITSKTFAYTNHTLMPEALECWDEKLVKSLLPRHMQIIKEINTRF 381 (798)
T ss_pred CCcEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHheeeecCCCChhhhCCCCHHHHHHHhHHHHHHHHHHHHHH
Confidence 7899999998887665544332 110000 12357899999985443 45555554332110 000011
Q ss_pred ----ccccc----ccccccccCcchhhhHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCC
Q 006091 355 ----EWVFP----TWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDI 426 (662)
Q Consensus 355 ----~~~~~----~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~ 426 (662)
...++ .+.++..+.. ..++|...++..+..|-.||+-+.+.+.+..+ ..++...+.++.-++|||..
T Consensus 382 l~~~~~~~~~d~~~~~~~sii~~-~~v~Ma~LAi~~S~~vNGVS~lH~eil~~~~f----~df~~l~p~kf~nvTNGVt~ 456 (798)
T PRK14985 382 KTLVEKTWPGDKKVWAKLAVVHD-KQVRMANLCVVSGFAVNGVAALHSDLVVKDLF----PEYHQLWPNKFHNVTNGITP 456 (798)
T ss_pred HHHHHHhCCCcHHHhhhhhhccC-CeeehHHHHHHhcchhHhhHHHHhchhHHhhh----hhhHhhCCCccCCcCCCcCc
Confidence 11111 1222222222 35788888889999999999877765554222 22334446788899999999
Q ss_pred CCCCCCCchhhc---c-----c-------------Cccc-cc-----chhHHhHH----HHHHHhCCCCCCCCCEEEEEe
Q 006091 427 TEWNPSSDEHIA---S-----H-------------YSID-DL-----SGKVQCKI----ALQKELGLPIRPDCPLIGFIG 475 (662)
Q Consensus 427 ~~~~~~~~~~i~---~-----~-------------~~~~-~~-----~~~~~~k~----~~r~~lgl~~~~~~~~Il~vG 475 (662)
..|-...++.+. . . +..+ ++ .-|..+|. -++++.|+..+++...++++-
T Consensus 457 rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~~~~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~k 536 (798)
T PRK14985 457 RRWIKQCNPALAALLDKTLKKEWANDLDQLINLEKYADDAAFRQQYREIKQANKVRLAEFVKQRTGIEINPQAIFDVQIK 536 (798)
T ss_pred chhhhhhCHHHHHHHHHhcCcchhhChHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCchhcchhhHh
Confidence 888521111111 0 1 1110 10 11223333 355677888889999999999
Q ss_pred cCCCccCHHH-HHHHHHhc---cC-C-----CeEEEEEeCCChhhH------HHHHHHHhhc--------CCcEEEEcCC
Q 006091 476 RLDYQKGIDL-IRLAAPEI---LA-D-----DIQFVMLGSGDPQFE------SWMRDTEATY--------KDKYRGWVGF 531 (662)
Q Consensus 476 rl~~~Kg~d~-Ll~A~~~l---~~-~-----d~~lvivG~g~~~~~------~~~~~l~~~~--------~~~~~~~~~~ 531 (662)
|+..+|+..+ ++..+..+ ++ + +.++++.|...|.+. +++..++... ..+++..-.|
T Consensus 537 R~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY 616 (798)
T PRK14985 537 RLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVGDKLKVVFLPDY 616 (798)
T ss_pred hhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhhCCceeEEEeCCC
Confidence 9999999998 76665443 32 2 478999998755433 2222333221 1257767777
Q ss_pred ChHHHHHHHHhcCEEEEcCC--CCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEE
Q 006091 532 NVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSF 600 (662)
Q Consensus 532 ~~~~~~~ll~~aDi~v~PS~--~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~ 600 (662)
+-.....++.+|||....|+ .|++|.+-|.+|..|.+.++|--|...|+.++. +++|||.|
T Consensus 617 ~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~v--------G~eN~f~f 679 (798)
T PRK14985 617 CVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQV--------GEENIFIF 679 (798)
T ss_pred ChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHh--------CcCcEEEe
Confidence 88888899999999999997 599999999999999999999999988888641 13566666
No 114
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.74 E-value=2.6e-07 Score=106.42 Aligned_cols=297 Identities=18% Similarity=0.189 Sum_probs=187.9
Q ss_pred CccEEEeCCCCcchHHHHHHhhc-CCCCC-------CCCCcEEEEecCCCCCC--CCChhhhhhcCCChhhhc---cc--
Q 006091 290 EKCIFLVNDWHAGLVPVLLASKY-RPHGV-------YKDARSILVIHNLSHQG--VEPAATYKNLGLPSEWYG---AL-- 354 (662)
Q Consensus 290 ~pDVVh~h~~~~~l~~~ll~~~~-~~~~~-------~~gip~v~tiH~~~~~~--~~~~~~~~~~~l~~~~~~---~~-- 354 (662)
++.+||.|+-|++++.+-+.+.+ ...++ .....+++|-|++-..+ .||...+..+.. +++. .+
T Consensus 300 ~~~~ihlNDtHpalai~ElmR~L~d~~gl~w~~Aw~i~~~~~~yTnHT~lpealE~wp~~l~~~~lp--r~~~II~~In~ 377 (797)
T cd04300 300 DKVAIQLNDTHPALAIPELMRILVDEEGLDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFERLLP--RHLEIIYEINR 377 (797)
T ss_pred CceEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhheeeecCCCchHHhCccCHHHHHHHCh--HHHHHHHHHHH
Confidence 68999999988876655444321 00010 12357899999985443 355555543321 1111 00
Q ss_pred ------cccc----cccccccccCc--chhhhHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecC
Q 006091 355 ------EWVF----PTWARTHALDT--GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITN 422 (662)
Q Consensus 355 ------~~~~----~~~~~~~~~~~--~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpn 422 (662)
...+ ....++..... ...++|...++..|..|-.||.-+.+.+++..+ ..++..-+.++.-++|
T Consensus 378 ~~~~~~~~~~~~~~~~~~~l~ii~~~~~~~v~Ma~LAi~~S~~vNGVS~lH~ei~k~~~~----~df~~l~P~kf~n~TN 453 (797)
T cd04300 378 RFLEEVRAKYPGDEDRIRRMSIIEEGGEKQVRMAHLAIVGSHSVNGVAALHSELLKETVF----KDFYELYPEKFNNKTN 453 (797)
T ss_pred HHHHHHHHhcCCCHHHHHhhcccccCCCCEEehHHHHHhcCcchhhhHHHHHHHHHHhhH----HHHHhhCCCccCCcCC
Confidence 0011 01112222222 235788899999999999999888776664321 2234455678889999
Q ss_pred CCCCCCCCCCCchhhccc--------Cc------------ccc------c-chhHHhHH----HHHHHhCCCCCCCCCEE
Q 006091 423 GIDITEWNPSSDEHIASH--------YS------------IDD------L-SGKVQCKI----ALQKELGLPIRPDCPLI 471 (662)
Q Consensus 423 Gvd~~~~~~~~~~~i~~~--------~~------------~~~------~-~~~~~~k~----~~r~~lgl~~~~~~~~I 471 (662)
||....|-...++.+..- +. .+| + .-|..+|. -++++.|+..+++...+
T Consensus 454 GVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~~K~~nK~~L~~~i~~~~g~~ldp~slfd 533 (797)
T cd04300 454 GITPRRWLLQANPGLSALITETIGDDWVTDLDQLKKLEPFADDPAFLKEFRAIKQANKERLAAYIKKTTGVEVDPDSLFD 533 (797)
T ss_pred CCCcchhhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCccEE
Confidence 999987752222211111 10 111 1 12334443 45667798888999999
Q ss_pred EEEecCCCccCHHH-HHHHHH---hccC-C-----CeEEEEEeCCChhhH------HHHHHHHhh------cC--CcEEE
Q 006091 472 GFIGRLDYQKGIDL-IRLAAP---EILA-D-----DIQFVMLGSGDPQFE------SWMRDTEAT------YK--DKYRG 527 (662)
Q Consensus 472 l~vGrl~~~Kg~d~-Ll~A~~---~l~~-~-----d~~lvivG~g~~~~~------~~~~~l~~~------~~--~~~~~ 527 (662)
+++-|+..+|+..+ ++..+. ++++ + +.++++.|...|.+. .++..++.. .. .+++.
T Consensus 534 vq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVF 613 (797)
T cd04300 534 VQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDVGDKLKVVF 613 (797)
T ss_pred EEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhcCCceEEEE
Confidence 99999999999999 665544 4443 2 477888888655332 222233332 11 25776
Q ss_pred EcCCChHHHHHHHHhcCEEEEcCC--CCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEE
Q 006091 528 WVGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSF 600 (662)
Q Consensus 528 ~~~~~~~~~~~ll~~aDi~v~PS~--~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~ 600 (662)
.-.|+-.....++.+|||....|+ .|++|.+-|-+|..|.+.++|--|...|+.++. +++|+|+|
T Consensus 614 lenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~v--------G~eN~fiF 680 (797)
T cd04300 614 LPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEV--------GEENIFIF 680 (797)
T ss_pred eCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHh--------CcCcEEEe
Confidence 777888888899999999999997 599999999999999999999999999888752 13566666
No 115
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.68 E-value=3e-07 Score=84.87 Aligned_cols=108 Identities=19% Similarity=0.264 Sum_probs=67.6
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEEe
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 232 (662)
||++|+... +.++.+++++|.+.||+|+|+++..... . ...
T Consensus 1 KIl~i~~~~---------~~~~~~~~~~L~~~g~~V~ii~~~~~~~-----~-------------------------~~~ 41 (139)
T PF13477_consen 1 KILLIGNTP---------STFIYNLAKELKKRGYDVHIITPRNDYE-----K-------------------------YEI 41 (139)
T ss_pred CEEEEecCc---------HHHHHHHHHHHHHCCCEEEEEEcCCCch-----h-------------------------hhH
Confidence 689998642 3568899999999999999999853210 0 112
Q ss_pred eCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCc-chHHHHHHhh
Q 006091 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHA-GLVPVLLASK 311 (662)
Q Consensus 233 ~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~-~l~~~ll~~~ 311 (662)
.+++.++.++.+ .+. ...+... ..+.+.+... +|||||+|...+ ++++.+++..
T Consensus 42 ~~~i~~~~~~~~---~k~-------------~~~~~~~-~~l~k~ik~~--------~~DvIh~h~~~~~~~~~~l~~~~ 96 (139)
T PF13477_consen 42 IEGIKVIRLPSP---RKS-------------PLNYIKY-FRLRKIIKKE--------KPDVIHCHTPSPYGLFAMLAKKL 96 (139)
T ss_pred hCCeEEEEecCC---CCc-------------cHHHHHH-HHHHHHhccC--------CCCEEEEecCChHHHHHHHHHHH
Confidence 357777777433 110 1111111 1233333322 799999999776 5666666554
Q ss_pred cCCCCCCCCCcEEEEecCC
Q 006091 312 YRPHGVYKDARSILVIHNL 330 (662)
Q Consensus 312 ~~~~~~~~gip~v~tiH~~ 330 (662)
. ..+|+|++.|+.
T Consensus 97 ~------~~~~~i~~~hg~ 109 (139)
T PF13477_consen 97 L------KNKKVIYTVHGS 109 (139)
T ss_pred c------CCCCEEEEecCC
Confidence 3 249999999975
No 116
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.48 E-value=7.9e-06 Score=86.53 Aligned_cols=116 Identities=18% Similarity=0.241 Sum_probs=77.3
Q ss_pred CCCEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEE
Q 006091 467 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 546 (662)
Q Consensus 467 ~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~ 546 (662)
.+.+++++|..+.. .++++++.+ ++.+++++|..... ....++ .+.++......++|+.||++
T Consensus 192 ~~~iLv~~gg~~~~----~~~~~l~~~--~~~~~~v~g~~~~~----------~~~~ni-~~~~~~~~~~~~~m~~ad~v 254 (318)
T PF13528_consen 192 EPKILVYFGGGGPG----DLIEALKAL--PDYQFIVFGPNAAD----------PRPGNI-HVRPFSTPDFAELMAAADLV 254 (318)
T ss_pred CCEEEEEeCCCcHH----HHHHHHHhC--CCCeEEEEcCCccc----------ccCCCE-EEeecChHHHHHHHHhCCEE
Confidence 45688888887666 667877776 46888888776311 012222 24455545567899999999
Q ss_pred EEcCCCCCCcHH-HHHHHHcCCcEEEeCCcccccc------cccccccccCCCCccceEEEC--CCCHHHHHHHHHH
Q 006091 547 LMPSRFEPCGLN-QLYAMRYGTIPVVHATGGLRDT------VENFNPFAREGSGEGTGWSFL--PLSEESMLTALRF 614 (662)
Q Consensus 547 v~PS~~E~fgl~-~lEAma~G~PvVas~~gg~~ei------i~~~~~~~~~~~~~~~G~l~~--~~d~~~la~aI~~ 614 (662)
|.-. |.+ +.||+++|+|+|.-...+..|. +++ .+.|..++ ..+++.++++|++
T Consensus 255 Is~~-----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~----------~G~~~~~~~~~~~~~~l~~~l~~ 316 (318)
T PF13528_consen 255 ISKG-----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEE----------LGLGIVLSQEDLTPERLAEFLER 316 (318)
T ss_pred EECC-----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHH----------CCCeEEcccccCCHHHHHHHHhc
Confidence 9765 444 9999999999999766554433 333 45566654 3456777776654
No 117
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=98.47 E-value=5.6e-06 Score=94.24 Aligned_cols=299 Identities=17% Similarity=0.208 Sum_probs=164.9
Q ss_pred CccEEEeCCCCcchHHHHHHhh-cCCCCC-------CCCCcEEEEecCCCCCC--CCChhhhhhcCC---------Chhh
Q 006091 290 EKCIFLVNDWHAGLVPVLLASK-YRPHGV-------YKDARSILVIHNLSHQG--VEPAATYKNLGL---------PSEW 350 (662)
Q Consensus 290 ~pDVVh~h~~~~~l~~~ll~~~-~~~~~~-------~~gip~v~tiH~~~~~~--~~~~~~~~~~~l---------~~~~ 350 (662)
++-++|+|+-|++++.+-+.+. ....++ ....-+++|-|++-..+ .||...+..+-. ..++
T Consensus 214 ~~~~ihlNdtHpa~ai~ElmR~L~de~gl~~~eA~eiv~~~~~fTnHT~vpealE~wp~~l~~~~Lpr~~~ii~ein~~f 293 (713)
T PF00343_consen 214 DKVVIHLNDTHPAFAIPELMRILMDEEGLSWDEAWEIVRKTFAFTNHTPVPEALEKWPVDLFERYLPRHLEIIYEINRRF 293 (713)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHTT---HHHHHHHHHHHEEEEE--SSGGGS-EEEHHHHHHHSHHHHHHHHHHHHHH
T ss_pred cceEEeecCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHhceeeeccccccccccccCHHHHHHHChHHHHHHHHHhHHH
Confidence 3569999998887665533322 211111 01246799999985444 355544433210 0111
Q ss_pred hcccccccc----ccccccccC--cchhhhHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCC
Q 006091 351 YGALEWVFP----TWARTHALD--TGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGI 424 (662)
Q Consensus 351 ~~~~~~~~~----~~~~~~~~~--~~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGv 424 (662)
+..+...++ ...++.... ....++|...++..+..+-.||+-+.+.+.+..+ ..++...+.++.-|+|||
T Consensus 294 ~~~~~~~~~~d~~~~~~l~ii~~~~~~~~~Ma~LAl~~S~~vNGVS~LH~ev~k~~~f----~~f~~l~P~kf~nvTNGV 369 (713)
T PF00343_consen 294 LDELRRKYPGDEDQIRRLSIIEEGNSKRFRMANLALRGSHSVNGVSKLHGEVLKQMVF----KDFYELWPEKFGNVTNGV 369 (713)
T ss_dssp HHHHHHHSTT-HHHHHHHSSEETSSSCEEEHHHHHHHCESEEEESSHHHHHHHHHTTT----HHHHHHSGGGEEE----B
T ss_pred HHHHHHHhcCcchhhhhcccccccchhhcchhHHHHHhcccccchHHHHHHHHHHHHh----hhhhhcCCceeeccccCc
Confidence 111111111 011111111 2246789999999999999999887776543222 234455667899999999
Q ss_pred CCCCCCCCCchh--------hcccCcc--cccc-----------------hhHHhH----HHHHHHhCCCCCCCCCEEEE
Q 006091 425 DITEWNPSSDEH--------IASHYSI--DDLS-----------------GKVQCK----IALQKELGLPIRPDCPLIGF 473 (662)
Q Consensus 425 d~~~~~~~~~~~--------i~~~~~~--~~~~-----------------~~~~~k----~~~r~~lgl~~~~~~~~Il~ 473 (662)
....|-....+. +...+.. +.+. -|..+| ..++++.++..+++...+++
T Consensus 370 h~rrWl~~~nP~L~~L~~~~iG~~W~~d~~~l~~l~~~~dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfdv~ 449 (713)
T PF00343_consen 370 HPRRWLSQANPELSELITEYIGDDWRTDLEQLEKLEKFADDEEFQEELREVKQENKERLAEYIKKRTGVELDPDSLFDVQ 449 (713)
T ss_dssp -TCCCCCCTSHHHHHHHHHHHTSGGGCSGGGGGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEEEE
T ss_pred cCcccccccCHHHHHHHHHHhccccccCHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhhhh
Confidence 998885432221 1111211 1110 112222 34566778877788889999
Q ss_pred EecCCCccCHHH-HHH---HHHhccC------CCeEEEEEeCCChhhH---HHHHH---HHhh------cCC--cEEEEc
Q 006091 474 IGRLDYQKGIDL-IRL---AAPEILA------DDIQFVMLGSGDPQFE---SWMRD---TEAT------YKD--KYRGWV 529 (662)
Q Consensus 474 vGrl~~~Kg~d~-Ll~---A~~~l~~------~d~~lvivG~g~~~~~---~~~~~---l~~~------~~~--~~~~~~ 529 (662)
+-|+..+|+..+ ++. -+.++++ .++++++.|...|.+. ..++. ++.. ... +++..-
T Consensus 450 ~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvFle 529 (713)
T PF00343_consen 450 ARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVFLE 529 (713)
T ss_dssp ES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEEET
T ss_pred hhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEeec
Confidence 999999999888 333 3344433 2688999998765443 23332 2221 112 567666
Q ss_pred CCChHHHHHHHHhcCEEEEcCC--CCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEE
Q 006091 530 GFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSF 600 (662)
Q Consensus 530 ~~~~~~~~~ll~~aDi~v~PS~--~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~ 600 (662)
.|+-.....++++|||.+..|+ .|++|.+-+.||..|.+.+++--|...|+.+.. +.+|.|+|
T Consensus 530 nYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~v--------G~eN~fiF 594 (713)
T PF00343_consen 530 NYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAV--------GEENIFIF 594 (713)
T ss_dssp T-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH---------GGGSEEE
T ss_pred CCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhc--------CCCcEEEc
Confidence 7788888899999999999997 699999999999999999999999999987641 14577877
No 118
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=98.46 E-value=2e-05 Score=86.27 Aligned_cols=123 Identities=18% Similarity=0.172 Sum_probs=75.8
Q ss_pred CCCEEEEEecCCC---ccCHHHHHHHHHhccCCCeEEEE-EeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHh
Q 006091 467 DCPLIGFIGRLDY---QKGIDLIRLAAPEILADDIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAG 542 (662)
Q Consensus 467 ~~~~Il~vGrl~~---~Kg~d~Ll~A~~~l~~~d~~lvi-vG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~ 542 (662)
...+++..|+... .+-...+++++..+ +.++++ +|..... . .....++.+..++ + ...+|..
T Consensus 239 ~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~---~~~~i~~~g~~~~~-~-----~~~~~~v~~~~~~--p---~~~ll~~ 304 (401)
T cd03784 239 RPPVYVGFGSMVVRDPEALARLDVEAVATL---GQRAILSLGWGGLG-A-----EDLPDNVRVVDFV--P---HDWLLPR 304 (401)
T ss_pred CCcEEEeCCCCcccCHHHHHHHHHHHHHHc---CCeEEEEccCcccc-c-----cCCCCceEEeCCC--C---HHHHhhh
Confidence 3456677788754 34455666666655 556554 4544311 1 0111223333443 2 2358999
Q ss_pred cCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcc----cccccccccccccCCCCccceEEECCC--CHHHHHHHHHHHH
Q 006091 543 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAI 616 (662)
Q Consensus 543 aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg----~~eii~~~~~~~~~~~~~~~G~l~~~~--d~~~la~aI~~~l 616 (662)
||++|.-. | ..++.||+++|+|+|+....+ ..+.+.+ .+.|..++.. +.+++.++|.+++
T Consensus 305 ~d~~I~hg---G-~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~----------~G~g~~l~~~~~~~~~l~~al~~~l 370 (401)
T cd03784 305 CAAVVHHG---G-AGTTAAALRAGVPQLVVPFFGDQPFWAARVAE----------LGAGPALDPRELTAERLAAALRRLL 370 (401)
T ss_pred hheeeecC---C-chhHHHHHHcCCCEEeeCCCCCcHHHHHHHHH----------CCCCCCCCcccCCHHHHHHHHHHHh
Confidence 99999433 3 478999999999999985543 2344444 4577776554 6888999998887
Q ss_pred H
Q 006091 617 R 617 (662)
Q Consensus 617 ~ 617 (662)
.
T Consensus 371 ~ 371 (401)
T cd03784 371 D 371 (401)
T ss_pred C
Confidence 5
No 119
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.43 E-value=0.00014 Score=79.62 Aligned_cols=149 Identities=13% Similarity=-0.007 Sum_probs=89.3
Q ss_pred CCCCEE-EEEecCC--CccCHHHHHHHHHhccC-CCeEEEEEeCCChhhHHHHHHHHhh-cCC--------------cEE
Q 006091 466 PDCPLI-GFIGRLD--YQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEAT-YKD--------------KYR 526 (662)
Q Consensus 466 ~~~~~I-l~vGrl~--~~Kg~d~Ll~A~~~l~~-~d~~lvivG~g~~~~~~~~~~l~~~-~~~--------------~~~ 526 (662)
++.++| ++.|.-. ..+++..++++++.+.+ +++++++.-.+....+...+.+... ... .+.
T Consensus 203 ~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 282 (396)
T TIGR03492 203 TGRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLE 282 (396)
T ss_pred CCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCHHHHHHHHHhcCceecCCccccchhhccCceE
Confidence 344544 4445432 25678899999999864 4788776543323344433333321 110 111
Q ss_pred EEcCCChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccc---cccccccccccCCCCccceEEECCC
Q 006091 527 GWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLR---DTVENFNPFAREGSGEGTGWSFLPL 603 (662)
Q Consensus 527 ~~~~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~---eii~~~~~~~~~~~~~~~G~l~~~~ 603 (662)
...+. ..+..+|+.||++|..| |.+..|++++|+|+|.....+.. .+.+.. .. -.+.++.+...
T Consensus 283 -v~~~~-~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~-----~~-l~g~~~~l~~~ 349 (396)
T TIGR03492 283 -VLLGR-GAFAEILHWADLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQ-----SR-LLGGSVFLASK 349 (396)
T ss_pred -EEech-HhHHHHHHhCCEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhh-----Hh-hcCCEEecCCC
Confidence 22222 23568999999999986 56779999999999998643221 111110 00 00244455567
Q ss_pred CHHHHHHHHHHHHHHhhhCHHHHHHHHH
Q 006091 604 SEESMLTALRFAIRTYREHKSSWEGLMR 631 (662)
Q Consensus 604 d~~~la~aI~~~l~~~~~~~~~~~~l~~ 631 (662)
+++.++++|..+++ |++.+.+|.+
T Consensus 350 ~~~~l~~~l~~ll~----d~~~~~~~~~ 373 (396)
T TIGR03492 350 NPEQAAQVVRQLLA----DPELLERCRR 373 (396)
T ss_pred CHHHHHHHHHHHHc----CHHHHHHHHH
Confidence 78999999988876 7887777764
No 120
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.42 E-value=0.0001 Score=76.79 Aligned_cols=97 Identities=11% Similarity=0.010 Sum_probs=66.9
Q ss_pred CCEEEEEecCCCccCHHHHHHHHHhccCCCeE-EEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEE
Q 006091 468 CPLIGFIGRLDYQKGIDLIRLAAPEILADDIQ-FVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 546 (662)
Q Consensus 468 ~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~-lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~ 546 (662)
+.++++.|..++.+....+++++..+. .+++ .+++|.+.+..+++.+...... ++. ..++. +.+.++|+.||++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~-~~~~i~vv~G~~~~~~~~l~~~~~~~~--~i~-~~~~~-~~m~~lm~~aDl~ 245 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ-INISITLVTGSSNPNLDELKKFAKEYP--NII-LFIDV-ENMAELMNEADLA 245 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc-cCceEEEEECCCCcCHHHHHHHHHhCC--CEE-EEeCH-HHHHHHHHHCCEE
Confidence 357888898888776778888888764 3444 3367887655544444433322 333 33333 3466899999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCcEEEeCC
Q 006091 547 LMPSRFEPCGLNQLYAMRYGTIPVVHAT 574 (662)
Q Consensus 547 v~PS~~E~fgl~~lEAma~G~PvVas~~ 574 (662)
+.+ .|.++.|++++|+|+|+-..
T Consensus 246 Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 246 IGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred EEC-----CchHHHHHHHcCCCEEEEEe
Confidence 985 46899999999999998654
No 121
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=98.40 E-value=1.9e-06 Score=90.66 Aligned_cols=107 Identities=17% Similarity=0.264 Sum_probs=73.5
Q ss_pred HHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEE-------CCCCHHHHHH
Q 006091 538 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSF-------LPLSEESMLT 610 (662)
Q Consensus 538 ~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~-------~~~d~~~la~ 610 (662)
++...|.+.|+||++|++|.+..|.-.+|+|-|+|+..|..-..+++ .++....|+.+ +..++++|++
T Consensus 496 eFVRGCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeeh-----i~d~~ayGIYIvDRRfks~deSv~qL~~ 570 (692)
T KOG3742|consen 496 EFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEH-----IEDPQAYGIYIVDRRFKSPDESVQQLAS 570 (692)
T ss_pred HHhccccccccccccCCCCCCchheEEeccccccccccchhhhHHHH-----hcCchhceEEEEecccCChhhHHHHHHH
Confidence 57789999999999999999999999999999999988765443331 11124467655 2234555555
Q ss_pred HHHHHHHHhhhCHHHHHHHHHHH----HHhcCCHHHHHHHHHHHHHHh
Q 006091 611 ALRFAIRTYREHKSSWEGLMRRG----MEKDYTWENAAIQYEQVFEWA 654 (662)
Q Consensus 611 aI~~~l~~~~~~~~~~~~l~~~~----~~~~fs~e~~a~~~~~iy~~~ 654 (662)
-+.+... ..+++++.++. ...-.+|..+-..|.+.=+.+
T Consensus 571 ~m~~F~~-----qsRRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~la 613 (692)
T KOG3742|consen 571 FMYEFCK-----QSRRQRIIQRNRTERLSDLLDWKYLGRYYRKARHLA 613 (692)
T ss_pred HHHHHHH-----HHHHHHHHHhcchhhHHHHHhHHHHhHHHHHHHHHH
Confidence 5555543 34455555554 456788988888777654433
No 122
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=98.38 E-value=0.00015 Score=79.23 Aligned_cols=154 Identities=16% Similarity=0.158 Sum_probs=84.9
Q ss_pred CEEEEEecCCCccCHHHHHHHHHhccCCCeEEEE-EeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEE
Q 006091 469 PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILL 547 (662)
Q Consensus 469 ~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvi-vG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v 547 (662)
.+++..|++...+. ..+-.++..+.+.++++++ +|.+.. ... ...+ ..++.+.+++ +. ..+|..||++|
T Consensus 227 ~v~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~i~~~g~~~~-~~~-~~~~--~~~v~~~~~~--p~---~~ll~~~~~~I 296 (392)
T TIGR01426 227 VVLISLGTVFNNQP-SFYRTCVEAFRDLDWHVVLSVGRGVD-PAD-LGEL--PPNVEVRQWV--PQ---LEILKKADAFI 296 (392)
T ss_pred EEEEecCccCCCCH-HHHHHHHHHHhcCCCeEEEEECCCCC-hhH-hccC--CCCeEEeCCC--CH---HHHHhhCCEEE
Confidence 45566787643322 2322233333333666554 455531 111 1111 1223333343 22 25899999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCcEEEeCCc----ccccccccccccccCCCCccceEEECC--CCHHHHHHHHHHHHHHhhh
Q 006091 548 MPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVENFNPFAREGSGEGTGWSFLP--LSEESMLTALRFAIRTYRE 621 (662)
Q Consensus 548 ~PS~~E~fgl~~lEAma~G~PvVas~~g----g~~eii~~~~~~~~~~~~~~~G~l~~~--~d~~~la~aI~~~l~~~~~ 621 (662)
..+ |. .+++||+++|+|+|+.... ...+.+.+ .+.|..+.. .+.++++++|.+++.
T Consensus 297 ~hg---G~-~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~----------~g~g~~l~~~~~~~~~l~~ai~~~l~---- 358 (392)
T TIGR01426 297 THG---GM-NSTMEALFNGVPMVAVPQGADQPMTARRIAE----------LGLGRHLPPEEVTAEKLREAVLAVLS---- 358 (392)
T ss_pred ECC---Cc-hHHHHHHHhCCCEEecCCcccHHHHHHHHHH----------CCCEEEeccccCCHHHHHHHHHHHhc----
Confidence 766 33 3789999999999996433 22233444 457777654 357889999998886
Q ss_pred CHHHHHHHHHHH--HHhcCCHHHHHHHHHHH
Q 006091 622 HKSSWEGLMRRG--MEKDYTWENAAIQYEQV 650 (662)
Q Consensus 622 ~~~~~~~l~~~~--~~~~fs~e~~a~~~~~i 650 (662)
+++.++++.+-. +...-..+++++.++++
T Consensus 359 ~~~~~~~~~~l~~~~~~~~~~~~aa~~i~~~ 389 (392)
T TIGR01426 359 DPRYAERLRKMRAEIREAGGARRAADEIEGF 389 (392)
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHh
Confidence 665444332221 33445666666665554
No 123
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.34 E-value=8.6e-05 Score=80.50 Aligned_cols=213 Identities=12% Similarity=0.119 Sum_probs=115.6
Q ss_pred HhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecC-CCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHH
Q 006091 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITN-GIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 459 (662)
Q Consensus 381 ~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpn-Gvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~ 459 (662)
+.|+..++.++...+.+.. .+.++.+|.++-| ++|.-.+.... .+..+.++
T Consensus 143 ~la~l~f~~t~~~~~~L~~----------eg~~~~~i~~tG~~~iD~l~~~~~~------------------~~~~~~~~ 194 (365)
T TIGR03568 143 KLSHLHFVATEEYRQRVIQ----------MGEDPDRVFNVGSPGLDNILSLDLL------------------SKEELEEK 194 (365)
T ss_pred HHHhhccCCCHHHHHHHHH----------cCCCCCcEEEECCcHHHHHHhhhcc------------------CHHHHHHH
Confidence 3557777777777766542 1334567877755 56643221111 13567788
Q ss_pred hCCCCCCCCCEE-EEEecC-----CCccCHHHHHHHHHhccCCCeEEEEE-eC-CChhhHHHHHHHHhhcCCcEEEEcCC
Q 006091 460 LGLPIRPDCPLI-GFIGRL-----DYQKGIDLIRLAAPEILADDIQFVML-GS-GDPQFESWMRDTEATYKDKYRGWVGF 531 (662)
Q Consensus 460 lgl~~~~~~~~I-l~vGrl-----~~~Kg~d~Ll~A~~~l~~~d~~lviv-G~-g~~~~~~~~~~l~~~~~~~~~~~~~~ 531 (662)
+|++ ++++++ +.+-+- ...+.+..+++++..+. .++.+++- ++ +.+...+.+...... ..++...-..
T Consensus 195 lgl~--~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~-~~~~vi~P~~~p~~~~i~~~i~~~~~~-~~~v~l~~~l 270 (365)
T TIGR03568 195 LGID--LDKPYALVTFHPVTLEKESAEEQIKELLKALDELN-KNYIFTYPNADAGSRIINEAIEEYVNE-HPNFRLFKSL 270 (365)
T ss_pred hCCC--CCCCEEEEEeCCCcccccCchHHHHHHHHHHHHhc-cCCEEEEeCCCCCchHHHHHHHHHhcC-CCCEEEECCC
Confidence 8875 333443 333332 22334555666665542 23433221 21 111222223332211 1223322222
Q ss_pred ChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHH
Q 006091 532 NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTA 611 (662)
Q Consensus 532 ~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~a 611 (662)
...+...++..|++++--| + ..+.||.++|+|+|+- +.-+|.+.. +.+.+++ ..|++++.++
T Consensus 271 ~~~~~l~Ll~~a~~vitdS---S--ggi~EA~~lg~Pvv~l--~~R~e~~~~----------g~nvl~v-g~~~~~I~~a 332 (365)
T TIGR03568 271 GQERYLSLLKNADAVIGNS---S--SGIIEAPSFGVPTINI--GTRQKGRLR----------ADSVIDV-DPDKEEIVKA 332 (365)
T ss_pred ChHHHHHHHHhCCEEEEcC---h--hHHHhhhhcCCCEEee--cCCchhhhh----------cCeEEEe-CCCHHHHHHH
Confidence 4445668999999999555 2 2338999999999964 456777766 6677777 5689999999
Q ss_pred HHHHHHHhhhCHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 006091 612 LRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQV 650 (662)
Q Consensus 612 I~~~l~~~~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~i 650 (662)
+..++ +++.+..+.. ....|...+.+++..++
T Consensus 333 ~~~~~-----~~~~~~~~~~--~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 333 IEKLL-----DPAFKKSLKN--VKNPYGDGNSSERIIEI 364 (365)
T ss_pred HHHHh-----ChHHHHHHhh--CCCCCCCChHHHHHHHh
Confidence 88743 3333333211 12346666666666553
No 124
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.30 E-value=9.3e-05 Score=78.63 Aligned_cols=132 Identities=17% Similarity=0.140 Sum_probs=77.3
Q ss_pred HHHHHHhCCCCCCCCCEEEEEecCCCcc-----C-HHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEE
Q 006091 454 IALQKELGLPIRPDCPLIGFIGRLDYQK-----G-IDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRG 527 (662)
Q Consensus 454 ~~~r~~lgl~~~~~~~~Il~vGrl~~~K-----g-~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~ 527 (662)
.++.+++|++ + .++|+. |..+.+ | -..+-+.+++|.+..-.+|++-..... .. +.+.++ +
T Consensus 168 ~~vl~~lg~~--~-~~yIvv--R~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~~-~~----~~~~~~--~-- 233 (335)
T PF04007_consen 168 PEVLKELGLD--D-EPYIVV--RPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYEDQ-RE----LFEKYG--V-- 233 (335)
T ss_pred hhHHHHcCCC--C-CCEEEE--EeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcch-hh----HHhccC--c--
Confidence 4678899965 3 455543 444322 1 233445666665543336666543211 11 112222 1
Q ss_pred EcCCChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCc---ccccccccccccccCCCCccceEEECCCC
Q 006091 528 WVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG---GLRDTVENFNPFAREGSGEGTGWSFLPLS 604 (662)
Q Consensus 528 ~~~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~g---g~~eii~~~~~~~~~~~~~~~G~l~~~~d 604 (662)
.+.-..-..+.++..||+++--+ |.-..||...|+|.|.+..| +..+.+. +.|+++...|
T Consensus 234 ~i~~~~vd~~~Ll~~a~l~Ig~g-----gTMa~EAA~LGtPaIs~~~g~~~~vd~~L~------------~~Gll~~~~~ 296 (335)
T PF04007_consen 234 IIPPEPVDGLDLLYYADLVIGGG-----GTMAREAALLGTPAISCFPGKLLAVDKYLI------------EKGLLYHSTD 296 (335)
T ss_pred cccCCCCCHHHHHHhcCEEEeCC-----cHHHHHHHHhCCCEEEecCCcchhHHHHHH------------HCCCeEecCC
Confidence 11111112347999999998544 77889999999999997654 3334444 3789999899
Q ss_pred HHHHHHHHHHHH
Q 006091 605 EESMLTALRFAI 616 (662)
Q Consensus 605 ~~~la~aI~~~l 616 (662)
++++.+.+....
T Consensus 297 ~~ei~~~v~~~~ 308 (335)
T PF04007_consen 297 PDEIVEYVRKNL 308 (335)
T ss_pred HHHHHHHHHHhh
Confidence 998877555443
No 125
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.13 E-value=0.00012 Score=78.59 Aligned_cols=268 Identities=15% Similarity=0.110 Sum_probs=136.3
Q ss_pred CccEEEeCC-CCcchHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccC
Q 006091 290 EKCIFLVND-WHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALD 368 (662)
Q Consensus 290 ~pDVVh~h~-~~~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 368 (662)
+||+|.++. -...+.+.+.+.. .++| |..+|.=-..+. ...|.+
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~-------~~ip-v~HieaGlRs~d------~~~g~~--------------------- 111 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFY-------LNIP-VAHIEAGLRSGD------RTEGMP--------------------- 111 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHH-------TT-E-EEEES-----S-------TTSSTT---------------------
T ss_pred CCCEEEEEcCCchHHHHHHHHHH-------hCCC-EEEecCCCCccc------cCCCCc---------------------
Confidence 799999985 5556666666554 5899 556664100000 000111
Q ss_pred cchhhhHHHHHH-HhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecC-CCCCCCCCCCCchhhcccCccccc
Q 006091 369 TGEAVNVLKGAI-VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITN-GIDITEWNPSSDEHIASHYSIDDL 446 (662)
Q Consensus 369 ~~~~~~~~k~~~-~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpn-Gvd~~~~~~~~~~~i~~~~~~~~~ 446 (662)
....|.++ +.|+..++.++..++.+.. .+.++++|+++-| ++|.-....
T Consensus 112 ----de~~R~~i~~la~lhf~~t~~~~~~L~~----------~G~~~~rI~~vG~~~~D~l~~~~--------------- 162 (346)
T PF02350_consen 112 ----DEINRHAIDKLAHLHFAPTEEARERLLQ----------EGEPPERIFVVGNPGIDALLQNK--------------- 162 (346)
T ss_dssp ----HHHHHHHHHHH-SEEEESSHHHHHHHHH----------TT--GGGEEE---HHHHHHHHHH---------------
T ss_pred ----hhhhhhhhhhhhhhhccCCHHHHHHHHh----------cCCCCCeEEEEChHHHHHHHHhH---------------
Confidence 12334444 4789999999998888764 2456788988866 344221000
Q ss_pred chhHHhHHHH-HHHhCCCCCCCCCEEEEEe-cCCC---ccCHHHHHHHHHhccC-CCeEEEEEeCCChhhHHHHHHHHhh
Q 006091 447 SGKVQCKIAL-QKELGLPIRPDCPLIGFIG-RLDY---QKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEAT 520 (662)
Q Consensus 447 ~~~~~~k~~~-r~~lgl~~~~~~~~Il~vG-rl~~---~Kg~d~Ll~A~~~l~~-~d~~lvivG~g~~~~~~~~~~l~~~ 520 (662)
......+ ...+.-. ..+++++... +... ......+.++++.|.+ +++++++.....+.....+...-..
T Consensus 163 ---~~~~~~~~~~~i~~~--~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~l~~ 237 (346)
T PF02350_consen 163 ---EEIEEKYKNSGILQD--APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGSDIIIEKLKK 237 (346)
T ss_dssp ---HTTCC-HHHHHHHHC--TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHHHTT
T ss_pred ---HHHhhhhhhHHHHhc--cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHHhcc
Confidence 0000001 1111001 2334444433 3322 3456777778877766 4899998877544444444333333
Q ss_pred cCCcEEEEcCCChHHHHHHHHhcCEEEEcCCCCCCcHHHH-HHHHcCCcEEEe-CCcccccccccccccccCCCCccceE
Q 006091 521 YKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQL-YAMRYGTIPVVH-ATGGLRDTVENFNPFAREGSGEGTGW 598 (662)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~l-EAma~G~PvVas-~~gg~~eii~~~~~~~~~~~~~~~G~ 598 (662)
+ .++...-.........+++.|+++|--| | .+. ||..+|+|+|.- +.|--.+.+.. +...
T Consensus 238 ~-~~v~~~~~l~~~~~l~ll~~a~~vvgdS-----s-GI~eEa~~lg~P~v~iR~~geRqe~r~~-----------~~nv 299 (346)
T PF02350_consen 238 Y-DNVRLIEPLGYEEYLSLLKNADLVVGDS-----S-GIQEEAPSLGKPVVNIRDSGERQEGRER-----------GSNV 299 (346)
T ss_dssp --TTEEEE----HHHHHHHHHHESEEEESS-----H-HHHHHGGGGT--EEECSSS-S-HHHHHT-----------TSEE
T ss_pred c-CCEEEECCCCHHHHHHHHhcceEEEEcC-----c-cHHHHHHHhCCeEEEecCCCCCHHHHhh-----------cceE
Confidence 3 2555554445555668999999998766 5 555 999999999997 45555566655 4455
Q ss_pred EECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 006091 599 SFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVF 651 (662)
Q Consensus 599 l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy 651 (662)
++. .|.+++.++|.+++. +++.+.++.. ....|.-.+.+++..+++
T Consensus 300 lv~-~~~~~I~~ai~~~l~----~~~~~~~~~~--~~npYgdG~as~rI~~~L 345 (346)
T PF02350_consen 300 LVG-TDPEAIIQAIEKALS----DKDFYRKLKN--RPNPYGDGNASERIVEIL 345 (346)
T ss_dssp EET-SSHHHHHHHHHHHHH-----HHHHHHHHC--S--TT-SS-HHHHHHHHH
T ss_pred EeC-CCHHHHHHHHHHHHh----ChHHHHhhcc--CCCCCCCCcHHHHHHHhh
Confidence 565 789999999999887 4444444332 123455555566665554
No 126
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.11 E-value=0.0029 Score=67.89 Aligned_cols=229 Identities=14% Similarity=0.119 Sum_probs=136.2
Q ss_pred hhhHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCC-CCCCCCCCCCchhhcccCcccccchhH
Q 006091 372 AVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG-IDITEWNPSSDEHIASHYSIDDLSGKV 450 (662)
Q Consensus 372 ~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnG-vd~~~~~~~~~~~i~~~~~~~~~~~~~ 450 (662)
...+.+..++..|.|++-|+.-++.+.+ ++.. ++.+.-|- +|.+ +.+. ..
T Consensus 167 ~~~~~~~~~~~i~li~aQse~D~~Rf~~----------LGa~--~v~v~GNlKfd~~---~~~~--------------~~ 217 (419)
T COG1519 167 LKFLARLLFKNIDLILAQSEEDAQRFRS----------LGAK--PVVVTGNLKFDIE---PPPQ--------------LA 217 (419)
T ss_pred HHHHHHHHHHhcceeeecCHHHHHHHHh----------cCCc--ceEEecceeecCC---CChh--------------hH
Confidence 3456777888999999999988877653 3333 24444431 2221 1110 11
Q ss_pred HhHHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccCC--CeEEEEEeCCChhhHHHHHHHHhhcCCcEEE-
Q 006091 451 QCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILAD--DIQFVMLGSGDPQFESWMRDTEATYKDKYRG- 527 (662)
Q Consensus 451 ~~k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~--d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~- 527 (662)
.....+|.+++. .+++++..+. +..--+.+++++++++++ +..+++|=.= |+.-..++.+.....-.+..
T Consensus 218 ~~~~~~r~~l~~----~r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~llIlVPRH-pERf~~v~~l~~~~gl~~~~r 290 (419)
T COG1519 218 AELAALRRQLGG----HRPVWVAAST--HEGEEEIILDAHQALKKQFPNLLLILVPRH-PERFKAVENLLKRKGLSVTRR 290 (419)
T ss_pred HHHHHHHHhcCC----CCceEEEecC--CCchHHHHHHHHHHHHhhCCCceEEEecCC-hhhHHHHHHHHHHcCCeEEee
Confidence 224567777763 2678888776 344456689999999774 6777777554 34333444444333222221
Q ss_pred ------------EcCCChHHHHHHHHhcCEEEEcCCC-CCCcHHHHHHHHcCCcEEEe----CCcccccccccccccccC
Q 006091 528 ------------WVGFNVPISHRITAGCDILLMPSRF-EPCGLNQLYAMRYGTIPVVH----ATGGLRDTVENFNPFARE 590 (662)
Q Consensus 528 ------------~~~~~~~~~~~ll~~aDi~v~PS~~-E~fgl~~lEAma~G~PvVas----~~gg~~eii~~~~~~~~~ 590 (662)
+++-.--++..+|..|||.++-..+ +-=|-.++|+.++|+|+|.- +...+.+-+..
T Consensus 291 S~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~------- 363 (419)
T COG1519 291 SQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQ------- 363 (419)
T ss_pred cCCCCCCCCCcEEEEecHhHHHHHHhhccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHh-------
Confidence 1111122456899999998877654 45577999999999999994 23333333433
Q ss_pred CCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 006091 591 GSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFE 652 (662)
Q Consensus 591 ~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy~ 652 (662)
.+.|+.++ |.+.+++++..++ .+++.+.++++++..---......+++++.++
T Consensus 364 ---~ga~~~v~--~~~~l~~~v~~l~----~~~~~r~~~~~~~~~~v~~~~gal~r~l~~l~ 416 (419)
T COG1519 364 ---AGAGLQVE--DADLLAKAVELLL----ADEDKREAYGRAGLEFLAQNRGALARTLEALK 416 (419)
T ss_pred ---cCCeEEEC--CHHHHHHHHHHhc----CCHHHHHHHHHHHHHHHHHhhHHHHHHHHHhh
Confidence 46677775 4565555555444 37888899988874322223334555554443
No 127
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.95 E-value=0.00043 Score=73.33 Aligned_cols=110 Identities=21% Similarity=0.143 Sum_probs=73.1
Q ss_pred HHHHHHHhCCCCCCCCCE-EEEEec-CCC-ccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEE
Q 006091 453 KIALQKELGLPIRPDCPL-IGFIGR-LDY-QKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRG 527 (662)
Q Consensus 453 k~~~r~~lgl~~~~~~~~-Il~vGr-l~~-~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~ 527 (662)
+.++|++++++ .+.++ .+..|+ -.. .+-+..+.+|+.++.+ ++.+|++--... .++................
T Consensus 175 r~~ar~~l~~~--~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~-~~~~~~~~~~~~~~~~~~~ 251 (381)
T COG0763 175 REAAREKLGID--ADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNA-KYRRIIEEALKWEVAGLSL 251 (381)
T ss_pred HHHHHHHhCCC--CCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcH-HHHHHHHHHhhccccCceE
Confidence 56799999998 44444 445553 333 4567888999999875 588988865542 3333333332222111222
Q ss_pred EcCCChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEe
Q 006091 528 WVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (662)
Q Consensus 528 ~~~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas 572 (662)
++ .+....+.|..||+.+..| |.+.||+|.+|+|.|++
T Consensus 252 ~~--~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P~Vv~ 289 (381)
T COG0763 252 IL--IDGEKRKAFAAADAALAAS-----GTATLEAALAGTPMVVA 289 (381)
T ss_pred Ee--cCchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCCEEEE
Confidence 22 3334567999999998877 99999999999999986
No 128
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.87 E-value=0.0013 Score=70.95 Aligned_cols=145 Identities=21% Similarity=0.168 Sum_probs=89.2
Q ss_pred HHHHHHhCCCCCCCCCEE-EEEe-cCCC-ccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEE
Q 006091 454 IALQKELGLPIRPDCPLI-GFIG-RLDY-QKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGW 528 (662)
Q Consensus 454 ~~~r~~lgl~~~~~~~~I-l~vG-rl~~-~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~ 528 (662)
...++.+ ++ +++++| +..| |-.. .+.+..++++++.+.+ +++++++..... .....+..............
T Consensus 173 ~~~~~~~-l~--~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~-~~~~~i~~~~~~~~~~~~~~ 248 (373)
T PF02684_consen 173 AEAREKL-LD--PDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPE-VHEELIEEILAEYPPDVSIV 248 (373)
T ss_pred HHHHHhc-CC--CCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCH-HHHHHHHHHHHhhCCCCeEE
Confidence 4455666 66 567755 4445 3444 4456889999999876 488888876543 34443444433332222222
Q ss_pred cCCChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEe-CCcc----------------cccccccccccccCC
Q 006091 529 VGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-ATGG----------------LRDTVENFNPFAREG 591 (662)
Q Consensus 529 ~~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas-~~gg----------------~~eii~~~~~~~~~~ 591 (662)
.. .....+.|+.||+.+..| |.+.||++.+|+|.|+. .... ++.++-+..
T Consensus 249 ~~--~~~~~~~m~~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~------ 315 (373)
T PF02684_consen 249 II--EGESYDAMAAADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGRE------ 315 (373)
T ss_pred Ec--CCchHHHHHhCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCC------
Confidence 21 122457999999999887 99999999999999985 3332 222222200
Q ss_pred CCccceEEECCCCHHHHHHHHHHHHH
Q 006091 592 SGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 592 ~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
-..=++-+..+++.+++++..++.
T Consensus 316 --v~PEliQ~~~~~~~i~~~~~~ll~ 339 (373)
T PF02684_consen 316 --VVPELIQEDATPENIAAELLELLE 339 (373)
T ss_pred --cchhhhcccCCHHHHHHHHHHHhc
Confidence 011123345679999999988887
No 129
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.77 E-value=0.0031 Score=71.28 Aligned_cols=108 Identities=17% Similarity=0.244 Sum_probs=69.0
Q ss_pred HHHHHHHhCCCCCCCCCEE-EEEe-cCCC-ccCHHHHHHHHH--hccCCCeEEEEEeCCChhhHHHHHHHHhhcC-CcEE
Q 006091 453 KIALQKELGLPIRPDCPLI-GFIG-RLDY-QKGIDLIRLAAP--EILADDIQFVMLGSGDPQFESWMRDTEATYK-DKYR 526 (662)
Q Consensus 453 k~~~r~~lgl~~~~~~~~I-l~vG-rl~~-~Kg~d~Ll~A~~--~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~-~~~~ 526 (662)
+.++++++|++ ++.++| +..| |-.+ .+.+..+++|++ .+.+ +.++++... ++...+..+....... ..+.
T Consensus 400 ~~~~r~~lgl~--~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~-~l~fvvp~a-~~~~~~~i~~~~~~~~~~~~~ 475 (608)
T PRK01021 400 NLSWKEQLHLP--SDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLAS-THQLLVSSA-NPKYDHLILEVLQQEGCLHSH 475 (608)
T ss_pred HHHHHHHcCCC--CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhcc-CeEEEEecC-chhhHHHHHHHHhhcCCCCeE
Confidence 35678899986 566655 4555 4434 456788999998 5543 688877533 2333333444332222 1222
Q ss_pred EEcCCChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEe
Q 006091 527 GWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (662)
Q Consensus 527 ~~~~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas 572 (662)
...+ ....++|++||+.+..| |.+.+|++.+|+|.|+.
T Consensus 476 ii~~---~~~~~~m~aaD~aLaaS-----GTaTLEaAL~g~PmVV~ 513 (608)
T PRK01021 476 IVPS---QFRYELMRECDCALAKC-----GTIVLETALNQTPTIVT 513 (608)
T ss_pred EecC---cchHHHHHhcCeeeecC-----CHHHHHHHHhCCCEEEE
Confidence 1211 11357999999999887 99999999999999984
No 130
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=97.72 E-value=0.0067 Score=64.50 Aligned_cols=114 Identities=15% Similarity=0.121 Sum_probs=67.1
Q ss_pred CEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEEE
Q 006091 469 PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLM 548 (662)
Q Consensus 469 ~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~ 548 (662)
.++++.|. .+...+++++..+ +++.+++ |..+... . ....++. ..++..+.+.++|..||+++.
T Consensus 190 ~iLv~~g~----~~~~~l~~~l~~~--~~~~~i~-~~~~~~~----~----~~~~~v~-~~~~~~~~~~~~l~~ad~vI~ 253 (321)
T TIGR00661 190 YILVYIGF----EYRYKILELLGKI--ANVKFVC-YSYEVAK----N----SYNENVE-IRRITTDNFKELIKNAELVIT 253 (321)
T ss_pred cEEEECCc----CCHHHHHHHHHhC--CCeEEEE-eCCCCCc----c----ccCCCEE-EEECChHHHHHHHHhCCEEEE
Confidence 34455433 3556777777665 3455544 4322111 1 1122222 224444446689999999998
Q ss_pred cCCCCCCcHHHHHHHHcCCcEEEeCCccccc------ccccccccccCCCCccceEEECCCCHHHHHHHHH
Q 006091 549 PSRFEPCGLNQLYAMRYGTIPVVHATGGLRD------TVENFNPFAREGSGEGTGWSFLPLSEESMLTALR 613 (662)
Q Consensus 549 PS~~E~fgl~~lEAma~G~PvVas~~gg~~e------ii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~ 613 (662)
-+ |+ .++.||+++|+|+|.....+..| .+.+ .+.|..++..+. ++.+++.
T Consensus 254 ~~---G~-~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~----------~g~~~~l~~~~~-~~~~~~~ 309 (321)
T TIGR00661 254 HG---GF-SLISEALSLGKPLIVIPDLGQFEQGNNAVKLED----------LGCGIALEYKEL-RLLEAIL 309 (321)
T ss_pred CC---Ch-HHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHH----------CCCEEEcChhhH-HHHHHHH
Confidence 77 32 36899999999999987665444 2444 467888776665 3333333
No 131
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.60 E-value=0.0022 Score=70.67 Aligned_cols=179 Identities=15% Similarity=0.028 Sum_probs=95.4
Q ss_pred HHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhc--CCcEEEEcCC
Q 006091 456 LQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATY--KDKYRGWVGF 531 (662)
Q Consensus 456 ~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~--~~~~~~~~~~ 531 (662)
.|+++||| .+..+++...+ ..|=-+..++++.++.+ |+.+|++..........+.+.+.... ..++. +.+.
T Consensus 275 ~R~~~gLp--~d~vvF~~fn~--~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~-f~~~ 349 (468)
T PF13844_consen 275 TRAQYGLP--EDAVVFGSFNN--LFKISPETLDLWARILKAVPNSRLWLLRFPASGEARLRRRFAAHGVDPDRII-FSPV 349 (468)
T ss_dssp ETGGGT----SSSEEEEE-S---GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTHHHHHHHHHHHTTS-GGGEE-EEE-
T ss_pred CHHHcCCC--CCceEEEecCc--cccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHHHHHHHHHHHHcCCChhhEE-EcCC
Confidence 47889998 55544444444 46777777787777765 68888887654322233333333321 12333 3433
Q ss_pred -ChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCccccc-----ccccccccccCCCCccceEEECCCCH
Q 006091 532 -NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRD-----TVENFNPFAREGSGEGTGWSFLPLSE 605 (662)
Q Consensus 532 -~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~e-----ii~~~~~~~~~~~~~~~G~l~~~~d~ 605 (662)
..++-...+..+||++=+..+ +-+.+.+||+.+|+|||+-....+.. ++... |-.-|+. .|.
T Consensus 350 ~~~~ehl~~~~~~DI~LDT~p~-nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~l---------Gl~ElIA--~s~ 417 (468)
T PF13844_consen 350 APREEHLRRYQLADICLDTFPY-NGGTTTLDALWMGVPVVTLPGETMASRVGASILRAL---------GLPELIA--DSE 417 (468)
T ss_dssp --HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHH---------T-GGGB---SSH
T ss_pred CCHHHHHHHhhhCCEEeeCCCC-CCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHc---------CCchhcC--CCH
Confidence 223233577899999988655 55889999999999999954222221 11110 1112222 367
Q ss_pred HHHHHHHHHHHHHhhhCHHHHHHHHHHHH-----HhcCCHHHHHHHHHHHHHHhh
Q 006091 606 ESMLTALRFAIRTYREHKSSWEGLMRRGM-----EKDYTWENAAIQYEQVFEWAS 655 (662)
Q Consensus 606 ~~la~aI~~~l~~~~~~~~~~~~l~~~~~-----~~~fs~e~~a~~~~~iy~~~~ 655 (662)
+++.+.-..+.+ |++.++++..+-. ..-|+-...++.+++.|++++
T Consensus 418 ~eYv~~Av~La~----D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~mW 468 (468)
T PF13844_consen 418 EEYVEIAVRLAT----DPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQMW 468 (468)
T ss_dssp HHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC----CHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHhC
Confidence 777766666655 6666666555432 245888999999999998763
No 132
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=97.54 E-value=0.007 Score=66.56 Aligned_cols=154 Identities=16% Similarity=0.148 Sum_probs=90.9
Q ss_pred CEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEEE
Q 006091 469 PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLM 548 (662)
Q Consensus 469 ~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~ 548 (662)
++....|..... .+++-.+++.+..-++++++...+... . .. ....+..+..++ +.. .++..||++++
T Consensus 239 ~vyvslGt~~~~--~~l~~~~~~a~~~l~~~vi~~~~~~~~--~-~~--~~p~n~~v~~~~--p~~---~~l~~ad~vI~ 306 (406)
T COG1819 239 IVYVSLGTVGNA--VELLAIVLEALADLDVRVIVSLGGARD--T-LV--NVPDNVIVADYV--PQL---ELLPRADAVIH 306 (406)
T ss_pred eEEEEcCCcccH--HHHHHHHHHHHhcCCcEEEEecccccc--c-cc--cCCCceEEecCC--CHH---HHhhhcCEEEe
Confidence 344455665544 444444444444448888887644110 0 00 011122333444 222 58999999998
Q ss_pred cCCCCCCcHHHHHHHHcCCcEEEeCCc----ccccccccccccccCCCCccceEEEC--CCCHHHHHHHHHHHHHHhhhC
Q 006091 549 PSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVENFNPFAREGSGEGTGWSFL--PLSEESMLTALRFAIRTYREH 622 (662)
Q Consensus 549 PS~~E~fgl~~lEAma~G~PvVas~~g----g~~eii~~~~~~~~~~~~~~~G~l~~--~~d~~~la~aI~~~l~~~~~~ 622 (662)
.. |. .+..||+.+|+|+|+-..+ ...+.+++ -++|.... ..+.+.++++|.+++. +
T Consensus 307 hG---G~-gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~----------~G~G~~l~~~~l~~~~l~~av~~vL~----~ 368 (406)
T COG1819 307 HG---GA-GTTSEALYAGVPLVVIPDGADQPLNAERVEE----------LGAGIALPFEELTEERLRAAVNEVLA----D 368 (406)
T ss_pred cC---Cc-chHHHHHHcCCCEEEecCCcchhHHHHHHHH----------cCCceecCcccCCHHHHHHHHHHHhc----C
Confidence 76 43 3678999999999996433 34455665 67887776 6889999999999997 5
Q ss_pred HHHHHHHHHHH--HHhcCCHHHHHHHHHHHHH
Q 006091 623 KSSWEGLMRRG--MEKDYTWENAAIQYEQVFE 652 (662)
Q Consensus 623 ~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy~ 652 (662)
+..++...+.. +.+.-....+++.+++.+.
T Consensus 369 ~~~~~~~~~~~~~~~~~~g~~~~a~~le~~~~ 400 (406)
T COG1819 369 DSYRRAAERLAEEFKEEDGPAKAADLLEEFAR 400 (406)
T ss_pred HHHHHHHHHHHHHhhhcccHHHHHHHHHHHHh
Confidence 54444333322 3444555555555555443
No 133
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.53 E-value=0.021 Score=58.88 Aligned_cols=134 Identities=14% Similarity=0.077 Sum_probs=78.4
Q ss_pred HHHHHHhCCCCCCCCCEEEE-Ee-----cCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEE
Q 006091 454 IALQKELGLPIRPDCPLIGF-IG-----RLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRG 527 (662)
Q Consensus 454 ~~~r~~lgl~~~~~~~~Il~-vG-----rl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~ 527 (662)
.++.+++|+. .+.+.|++ .- -....++++.+.++++++.+- -.|++-... ..+++-+.+.+...
T Consensus 170 ~evlkeLgl~--~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~--giV~ipr~~-----~~~eife~~~n~i~- 239 (346)
T COG1817 170 PEVLKELGLE--EGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKY--GIVLIPREK-----EQAEIFEGYRNIII- 239 (346)
T ss_pred HHHHHHcCCC--CCCceEEEeeccccceeeccccchhhHHHHHHHHHhC--cEEEecCch-----hHHHHHhhhccccC-
Confidence 4678999998 44455543 11 123366777888888888543 355553321 12222223222111
Q ss_pred EcCCChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCc---ccccccccccccccCCCCccceEEECCCC
Q 006091 528 WVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG---GLRDTVENFNPFAREGSGEGTGWSFLPLS 604 (662)
Q Consensus 528 ~~~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~g---g~~eii~~~~~~~~~~~~~~~G~l~~~~d 604 (662)
.-. ..+.+ .++-.|++++- +-|.-.-||.+.|+|.|.+.-| +..+... +.|.++...|
T Consensus 240 pk~-~vD~l-~Llyya~lvig-----~ggTMarEaAlLGtpaIs~~pGkll~vdk~li------------e~G~~~~s~~ 300 (346)
T COG1817 240 PKK-AVDTL-SLLYYATLVIG-----AGGTMAREAALLGTPAISCYPGKLLAVDKYLI------------EKGLLYHSTD 300 (346)
T ss_pred Ccc-cccHH-HHHhhhheeec-----CCchHHHHHHHhCCceEEecCCccccccHHHH------------hcCceeecCC
Confidence 000 01112 47778888874 3467789999999999998754 3444444 4899998888
Q ss_pred HHHHHHHHHHHH
Q 006091 605 EESMLTALRFAI 616 (662)
Q Consensus 605 ~~~la~aI~~~l 616 (662)
+.+..+...+.+
T Consensus 301 ~~~~~~~a~~~l 312 (346)
T COG1817 301 EIAIVEYAVRNL 312 (346)
T ss_pred HHHHHHHHHHHh
Confidence 775544444444
No 134
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=97.51 E-value=0.00091 Score=72.89 Aligned_cols=181 Identities=16% Similarity=0.111 Sum_probs=90.6
Q ss_pred eeEEEEeeccc-------CccccCcHHHHHhhHHHHHHhC--------CC----cEEEEeecCCCCCCcccchhhhcccC
Q 006091 152 YNIVFVTAEAA-------PYSKTGGLGDVCGSLPVALAAR--------GH----RVMVVSPRYFNGTAADENFTLAKDLG 212 (662)
Q Consensus 152 MkIl~vs~~~~-------P~~~~GG~~~~~~~La~~L~~~--------Gh----eV~Vit~~~~~~~~~~~~~~~~~~~~ 212 (662)
-+|++++.+.+ -.+.+||.-+|+.+++++|.+. |- +|.|+|...|+... ..+.
T Consensus 273 f~vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd~~~--t~~~------ 344 (550)
T PF00862_consen 273 FNVVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPDAKG--TTCN------ 344 (550)
T ss_dssp SEEEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TBTTC--GGGT------
T ss_pred EEEEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccCCcC--CCcc------
Confidence 37999998621 1134899999999999999863 43 48888876554221 1111
Q ss_pred ceeEEeecCCceEEEEEEEeeCCceEEEEeCCCCCCCCCCCCCCCC---CCCchhHHHHHHHHHHhh-hccccCCCCCCC
Q 006091 213 CCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDING---AFGDNQFRYTLLCYAACE-APLVLPLGGFTY 288 (662)
Q Consensus 213 ~~~~v~~~~~~~~~~~~~~~~~gv~v~~i~~~~~~~~~~~y~~~~~---~~~~~~~~~~~~~~a~~~-~~~~~~~~~f~~ 288 (662)
.+.. . ..-.++..++|++..... + +-..|- ..+.-+.+|. ..+.+ +...+ .
T Consensus 345 q~le-----------~-~~gt~~a~IlRvPF~~~~---g-i~~kwisrf~lWPyLe~fa---~d~~~~i~~e~------~ 399 (550)
T PF00862_consen 345 QRLE-----------K-VSGTENARILRVPFGPEK---G-ILRKWISRFDLWPYLEEFA---DDAEREILAEL------Q 399 (550)
T ss_dssp SSEE-----------E-ETTESSEEEEEE-ESEST---E-EE-S---GGG-GGGHHHHH---HHHHHHHHHHH------T
T ss_pred cccc-----------c-cCCCCCcEEEEecCCCCc---c-hhhhccchhhchhhHHHHH---HHHHHHHHHHh------C
Confidence 0000 0 001246778888633210 0 111110 1112233332 22211 11111 1
Q ss_pred CCccEEEeCCCCcchHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccC
Q 006091 289 GEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALD 368 (662)
Q Consensus 289 ~~pDVVh~h~~~~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 368 (662)
.+||+||.|...+++++.+++.+. |+|..+|-|.+. +..+...++. +..+...| .
T Consensus 400 ~~PdlI~GnYsDgnlvA~LLs~~l-------gv~~~~iaHsLe------k~Ky~~s~~~---w~e~e~~Y---------h 454 (550)
T PF00862_consen 400 GKPDLIIGNYSDGNLVASLLSRKL-------GVTQCFIAHSLE------KTKYEDSDLY---WKEIEEKY---------H 454 (550)
T ss_dssp S--SEEEEEHHHHHHHHHHHHHHH-------T-EEEEE-SS-H------HHHHHTTTTT---SHHHHHHH----------
T ss_pred CCCcEEEeccCcchHHHHHHHhhc-------CCceehhhhccc------cccccccCCC---HHHHHhhc---------c
Confidence 259999999999999999999885 899999999873 1222222211 11112111 1
Q ss_pred cchhhhHHHHHHHhcCEEEecC
Q 006091 369 TGEAVNVLKGAIVTADRLLTVS 390 (662)
Q Consensus 369 ~~~~~~~~k~~~~~ad~ii~vS 390 (662)
+...+.....++..||.|||-+
T Consensus 455 fs~qftAd~iamn~adfIItST 476 (550)
T PF00862_consen 455 FSCQFTADLIAMNAADFIITST 476 (550)
T ss_dssp HHHHHHHHHHHHHHSSEEEESS
T ss_pred chhhhhHHHHHhhcCCEEEEcc
Confidence 2334455667888999999854
No 135
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=97.48 E-value=0.074 Score=59.08 Aligned_cols=179 Identities=12% Similarity=0.052 Sum_probs=105.3
Q ss_pred HHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCC-hhhHHHHHHHHhhcCC--cEEEEcCC
Q 006091 457 QKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGD-PQFESWMRDTEATYKD--KYRGWVGF 531 (662)
Q Consensus 457 r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~-~~~~~~~~~l~~~~~~--~~~~~~~~ 531 (662)
|.++||| ++..+++..+ ...|-...+.....++.+ ++-.|++.|.|+ ++....++.+.+...+ ....+.+-
T Consensus 421 R~~lglp--~~avVf~c~~--n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~ 496 (620)
T COG3914 421 RAQLGLP--EDAVVFCCFN--NYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPP 496 (620)
T ss_pred hhhcCCC--CCeEEEEecC--CcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCC
Confidence 6788998 5544444444 456655555555544433 577888877753 5666677777665432 22223333
Q ss_pred -ChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeC-------CcccccccccccccccCCCCccceEEECCC
Q 006091 532 -NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA-------TGGLRDTVENFNPFAREGSGEGTGWSFLPL 603 (662)
Q Consensus 532 -~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~-------~gg~~eii~~~~~~~~~~~~~~~G~l~~~~ 603 (662)
..+.-.+.|.-||+++=+..+ +-..+.+||+.+|+|||+-- .|+ .++.. .|..-++.+
T Consensus 497 ~~~~~h~a~~~iADlvLDTyPY-~g~TTa~daLwm~vPVlT~~G~~FasR~~~--si~~~---------agi~e~vA~-- 562 (620)
T COG3914 497 APNEDHRARYGIADLVLDTYPY-GGHTTASDALWMGVPVLTRVGEQFASRNGA--SIATN---------AGIPELVAD-- 562 (620)
T ss_pred CCCHHHHHhhchhheeeecccC-CCccchHHHHHhcCceeeeccHHHHHhhhH--HHHHh---------cCCchhhcC--
Confidence 344455789999999977655 55779999999999999842 221 12222 122333332
Q ss_pred CHHHHHHHHHHHHHHhhhCHHHHHHHHHHH---H--HhcCCHHHHHHHHHHHHHHhhhC
Q 006091 604 SEESMLTALRFAIRTYREHKSSWEGLMRRG---M--EKDYTWENAAIQYEQVFEWASID 657 (662)
Q Consensus 604 d~~~la~aI~~~l~~~~~~~~~~~~l~~~~---~--~~~fs~e~~a~~~~~iy~~~~~~ 657 (662)
+.++..+.=..+- .|++++++....- + ..-|+.+..++++.++|.+++++
T Consensus 563 s~~dYV~~av~~g----~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~~~ 617 (620)
T COG3914 563 SRADYVEKAVAFG----SDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMWSE 617 (620)
T ss_pred CHHHHHHHHHHhc----ccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHHHh
Confidence 2333332222221 2555554443322 1 23688999999999999988753
No 136
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=97.46 E-value=0.0013 Score=62.90 Aligned_cols=150 Identities=19% Similarity=0.156 Sum_probs=83.4
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCC-CCcchHHHHHHhhc
Q 006091 234 EGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVND-WHAGLVPVLLASKY 312 (662)
Q Consensus 234 ~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~-~~~~l~~~ll~~~~ 312 (662)
+||+++.+..+.-. .... .++...+..-..-..++.+++..++..+| .||||.+|. |..+ ++++.-.
T Consensus 19 ~GV~~~~y~~~~~~---~~~~---~~~~~~~e~~~~rg~av~~a~~~L~~~Gf---~PDvI~~H~GWGe~---Lflkdv~ 86 (171)
T PF12000_consen 19 PGVRVVRYRPPRGP---TPGT---HPYVRDFEAAVLRGQAVARAARQLRAQGF---VPDVIIAHPGWGET---LFLKDVF 86 (171)
T ss_pred CCcEEEEeCCCCCC---CCCC---CcccccHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEcCCcchh---hhHHHhC
Confidence 47887777653211 1111 12345566666667777777777777788 799999996 4433 4555544
Q ss_pred CCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhh-HHHHHHHhcCEEEecCc
Q 006091 313 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVN-VLKGAIVTADRLLTVSK 391 (662)
Q Consensus 313 ~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~k~~~~~ad~ii~vS~ 391 (662)
+++|++..+--+... .-...+++.++-....... ..+..| .....+..+|..++++.
T Consensus 87 ------P~a~li~Y~E~~y~~------~g~d~~FDpe~p~~~~~~~----------~~r~rN~~~l~~l~~~D~~isPT~ 144 (171)
T PF12000_consen 87 ------PDAPLIGYFEFYYRA------SGADVGFDPEFPPSLDDRA----------RLRMRNAHNLLALEQADAGISPTR 144 (171)
T ss_pred ------CCCcEEEEEEEEecC------CCCcCCCCCCCCCCHHHHH----------HHHHHhHHHHHHHHhCCcCcCCCH
Confidence 789988765321000 0001111111100000000 011122 24456778999999998
Q ss_pred chhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCC
Q 006091 392 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEW 429 (662)
Q Consensus 392 ~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~ 429 (662)
+.+...- ..-.+||.||+-|||++.+
T Consensus 145 wQ~~~fP------------~~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 145 WQRSQFP------------AEFRSKISVIHDGIDTDRF 170 (171)
T ss_pred HHHHhCC------------HHHHcCcEEeecccchhhc
Confidence 8665432 1224799999999998754
No 137
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.32 E-value=0.027 Score=59.61 Aligned_cols=192 Identities=12% Similarity=0.053 Sum_probs=121.5
Q ss_pred CCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhc
Q 006091 414 KSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEI 493 (662)
Q Consensus 414 ~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l 493 (662)
..++..+++++|.+.+.+-+... .-.--+.++|+..+. .++.+-+.+-+-
T Consensus 160 ~~~~~~~~~a~d~~~~~~i~~da-----------------------------~~~~dL~~ign~~pD-r~e~~ke~~~~p 209 (373)
T COG4641 160 ARNCYYLPWAVDDSLFHPIPPDA-----------------------------SYDVDLNLIGNPYPD-RVEEIKEFFVEP 209 (373)
T ss_pred ccceeccCccCCchhcccCCccc-----------------------------cceeeeEEecCCCcc-HHHHHHHHhhcc
Confidence 45688999999999887755320 011246788876554 233333333221
Q ss_pred cCC---CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEEEcCCC---CC---CcHHHHHHHH
Q 006091 494 LAD---DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRF---EP---CGLNQLYAMR 564 (662)
Q Consensus 494 ~~~---d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~PS~~---E~---fgl~~lEAma 564 (662)
..+ +-++++.|..-+ .......- ..+.+..++.. .....+..+...|+.+.-++. ++ +.+-+.|+|+
T Consensus 210 s~kl~v~rr~~~~g~~y~--~~~~~~~~-~~~~~yIg~~~-~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiag 285 (373)
T COG4641 210 SFKLMVDRRFYVLGPRYP--DDIWGRTW-EPNVQYIGYYN-PKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAG 285 (373)
T ss_pred chhhhccceeeecCCccc--hhhhcccc-cchhhhhhccC-ccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhh
Confidence 111 456777777621 11111110 11233444442 223455778888888766652 22 3788999999
Q ss_pred cCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH---HHhcCCHH
Q 006091 565 YGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTWE 641 (662)
Q Consensus 565 ~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~---~~~~fs~e 641 (662)
||.+.|+...-++...+.+ |..-++ ..|..++.++++.++. +++.++++++.+ +...|+.+
T Consensus 286 c~~~liT~~~~~~e~~f~p----------gk~~iv--~~d~kdl~~~~~yll~----h~~erkeiae~~ye~V~~~ht~~ 349 (373)
T COG4641 286 CGGFLITDYWKDLEKFFKP----------GKDIIV--YQDSKDLKEKLKYLLN----HPDERKEIAECAYERVLARHTYE 349 (373)
T ss_pred cCCccccccHHHHHHhcCC----------chheEE--ecCHHHHHHHHHHHhc----CcchHHHHHHhhHHHHHHhccHH
Confidence 9999999888888888887 444444 3589999999998887 666677777766 45669999
Q ss_pred HHHHHHHHHHHHhh
Q 006091 642 NAAIQYEQVFEWAS 655 (662)
Q Consensus 642 ~~a~~~~~iy~~~~ 655 (662)
.-+.++++....+.
T Consensus 350 ~r~~~~~~~i~sI~ 363 (373)
T COG4641 350 ERIFKLLNEIASIN 363 (373)
T ss_pred HHHHHHHHHHHHHH
Confidence 99988888777643
No 138
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.27 E-value=0.04 Score=58.85 Aligned_cols=219 Identities=16% Similarity=0.061 Sum_probs=128.0
Q ss_pred HhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCC-CCCCCCCCCchhhcccCcccccchhHHhHHHHHHH
Q 006091 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGI-DITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 459 (662)
Q Consensus 381 ~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGv-d~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~ 459 (662)
..|+.-++.++..++.+... +.++++|+++-|-+ |.-.+... +..........
T Consensus 144 ~~S~~hfapte~ar~nLl~E----------G~~~~~IfvtGnt~iDal~~~~~----------------~~~~~~~~~~~ 197 (383)
T COG0381 144 HLSDLHFAPTEIARKNLLRE----------GVPEKRIFVTGNTVIDALLNTRD----------------RVLEDSKILAK 197 (383)
T ss_pred HhhhhhcCChHHHHHHHHHc----------CCCccceEEeCChHHHHHHHHHh----------------hhccchhhHHh
Confidence 35778888888888777642 34567899988764 32111100 00001111111
Q ss_pred -hCCCCCCCCCEE-EEEecCCC-ccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChH
Q 006091 460 -LGLPIRPDCPLI-GFIGRLDY-QKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVP 534 (662)
Q Consensus 460 -lgl~~~~~~~~I-l~vGrl~~-~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 534 (662)
+.. .++.+| +..=|-.. .+++..+++++.++.+ +++.++.-=.-.+...+.. ........++..+-+..-.
T Consensus 198 ~~~~---~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~~~v~e~~-~~~L~~~~~v~li~pl~~~ 273 (383)
T COG0381 198 GLDD---KDKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPRPRVRELV-LKRLKNVERVKLIDPLGYL 273 (383)
T ss_pred hhcc---ccCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCChhhhHHH-HHHhCCCCcEEEeCCcchH
Confidence 222 233344 44434433 3899999999988866 3666665443333333333 1111222245545554545
Q ss_pred HHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeC-CcccccccccccccccCCCCccceEEECCCCHHHHHHHHH
Q 006091 535 ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA-TGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALR 613 (662)
Q Consensus 535 ~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~-~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~ 613 (662)
....++..|-+.+--| |-..=||-..|+||++-+ .-.-+|.+.- ++-.++. .+.+.+.+++.
T Consensus 274 ~f~~L~~~a~~iltDS-----GgiqEEAp~lg~Pvl~lR~~TERPE~v~a-----------gt~~lvg-~~~~~i~~~~~ 336 (383)
T COG0381 274 DFHNLMKNAFLILTDS-----GGIQEEAPSLGKPVLVLRDTTERPEGVEA-----------GTNILVG-TDEENILDAAT 336 (383)
T ss_pred HHHHHHHhceEEEecC-----CchhhhHHhcCCcEEeeccCCCCccceec-----------CceEEeC-ccHHHHHHHHH
Confidence 5667888997776555 667789999999999964 3355666643 4555554 46788888998
Q ss_pred HHHHHhhhCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 006091 614 FAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFE 652 (662)
Q Consensus 614 ~~l~~~~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy~ 652 (662)
.+++ +++.+++|+... ..|.-.+..+++.++++
T Consensus 337 ~ll~----~~~~~~~m~~~~--npYgdg~as~rIv~~l~ 369 (383)
T COG0381 337 ELLE----DEEFYERMSNAK--NPYGDGNASERIVEILL 369 (383)
T ss_pred HHhh----ChHHHHHHhccc--CCCcCcchHHHHHHHHH
Confidence 8887 778788777643 34544445555555444
No 139
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=97.23 E-value=0.38 Score=50.67 Aligned_cols=138 Identities=14% Similarity=0.130 Sum_probs=72.9
Q ss_pred CCCEEEEEecCCCccCHHHHHHHHHhccC-CCe---EEEEEeCCChhhHHHHHHHHhhc-CCcEEEEcCCChHHHHHHHH
Q 006091 467 DCPLIGFIGRLDYQKGIDLIRLAAPEILA-DDI---QFVMLGSGDPQFESWMRDTEATY-KDKYRGWVGFNVPISHRITA 541 (662)
Q Consensus 467 ~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~-~d~---~lvivG~g~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~ll~ 541 (662)
...+++.+|- -.-|-+++..+++.... +++ -+++.|.--| +...+++.... +.-.+....|..+ +..+++
T Consensus 219 ~~~Ilvs~GG--G~dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~MP--~~~r~~l~~~A~~~p~i~I~~f~~~-~~~ll~ 293 (400)
T COG4671 219 GFDILVSVGG--GADGAELIETALAAAQLLAGLNHKWLIVTGPFMP--EAQRQKLLASAPKRPHISIFEFRND-FESLLA 293 (400)
T ss_pred cceEEEecCC--ChhhHHHHHHHHHHhhhCCCCCcceEEEeCCCCC--HHHHHHHHHhcccCCCeEEEEhhhh-HHHHHH
Confidence 3456677763 45565555555544322 333 3556665432 23333333221 1122234445444 447999
Q ss_pred hcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCC--cccccccccccccccCCCCccceEEE-CCCCHHHHHHHHHHHHH
Q 006091 542 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT--GGLRDTVENFNPFAREGSGEGTGWSF-LPLSEESMLTALRFAIR 617 (662)
Q Consensus 542 ~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~--gg~~eii~~~~~~~~~~~~~~~G~l~-~~~d~~~la~aI~~~l~ 617 (662)
.|+..|.-+=| +++.|-+++|+|.+.-.. ++-..++.- ...++-|-..++- +.-+++.|+++|+.++.
T Consensus 294 gA~~vVSm~GY----NTvCeILs~~k~aLivPr~~p~eEQliRA----~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~ 364 (400)
T COG4671 294 GARLVVSMGGY----NTVCEILSFGKPALIVPRAAPREEQLIRA----QRLEELGLVDVLLPENLTPQNLADALKAALA 364 (400)
T ss_pred hhheeeecccc----hhhhHHHhCCCceEEeccCCCcHHHHHHH----HHHHhcCcceeeCcccCChHHHHHHHHhccc
Confidence 99999966533 477899999999988532 232222321 0000012222332 23458889999988776
No 140
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=96.99 E-value=0.32 Score=50.61 Aligned_cols=164 Identities=12% Similarity=0.059 Sum_probs=104.2
Q ss_pred CEEEEEec-CCCccCHHHHHHHHHhccCCCeEEEEE-eC--CChhhHHHHHHHHh-hcC-CcEEEEcCCC-hHHHHHHHH
Q 006091 469 PLIGFIGR-LDYQKGIDLIRLAAPEILADDIQFVML-GS--GDPQFESWMRDTEA-TYK-DKYRGWVGFN-VPISHRITA 541 (662)
Q Consensus 469 ~~Il~vGr-l~~~Kg~d~Ll~A~~~l~~~d~~lviv-G~--g~~~~~~~~~~l~~-~~~-~~~~~~~~~~-~~~~~~ll~ 541 (662)
++.+-+|+ =++..++-.+++++.+....++++++- |- |++.|.+.+..... ... .++.....+- -++-.++++
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~ 225 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQFGDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLR 225 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHhCCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHH
Confidence 44445565 567888999999998887788887774 44 66666655555544 344 4555444331 122347999
Q ss_pred hcCEEEEcCC-CCCCcHHHHHHHHcCCcEEEeC-CcccccccccccccccCCCCccceEEECCCCH--HHHHHHHHHHHH
Q 006091 542 GCDILLMPSR-FEPCGLNQLYAMRYGTIPVVHA-TGGLRDTVENFNPFAREGSGEGTGWSFLPLSE--ESMLTALRFAIR 617 (662)
Q Consensus 542 ~aDi~v~PS~-~E~fgl~~lEAma~G~PvVas~-~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~--~~la~aI~~~l~ 617 (662)
.||+.++.-. .++.|+..+ .+..|+||+.++ +.-..++.+. +.-++|+..+. ..+.++
T Consensus 226 ~~Dl~~f~~~RQQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~e~-----------gv~Vlf~~d~L~~~~v~e~------ 287 (322)
T PRK02797 226 QCDLGYFIFARQQGIGTLCL-LIQLGKPVVLSRDNPFWQDLTEQ-----------GLPVLFTGDDLDEDIVREA------ 287 (322)
T ss_pred hCCEEEEeechhhHHhHHHH-HHHCCCcEEEecCCchHHHHHhC-----------CCeEEecCCcccHHHHHHH------
Confidence 9999998875 689998887 899999999974 5555554443 34444544332 211111
Q ss_pred HhhhCHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHhhhCC
Q 006091 618 TYREHKSSWEGLMRRG-MEKDYTWENAAIQYEQVFEWASIDP 658 (662)
Q Consensus 618 ~~~~~~~~~~~l~~~~-~~~~fs~e~~a~~~~~iy~~~~~~~ 658 (662)
.+++.... -.-.|+-++.++.|.+++..+..++
T Consensus 288 --------~rql~~~dk~~I~Ff~pn~~~~W~~~l~~~~g~~ 321 (322)
T PRK02797 288 --------QRQLASVDKNIIAFFSPNYLQGWRNALAIAAGEV 321 (322)
T ss_pred --------HHHHHhhCcceeeecCHhHHHHHHHHHHHhhCCC
Confidence 11111111 0113999999999999998876654
No 141
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=96.97 E-value=0.051 Score=58.35 Aligned_cols=90 Identities=13% Similarity=0.066 Sum_probs=57.0
Q ss_pred CEE-EEEecCC-C-ccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCE
Q 006091 469 PLI-GFIGRLD-Y-QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 545 (662)
Q Consensus 469 ~~I-l~vGrl~-~-~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi 545 (662)
++| ++.|+=. . .+-+..+++++.++.+...++++.+..+ .+ .++...... ..+ .+++ ...++|+.||+
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~--~~-~i~~~~~~~-~~~-~~~~----~~~~~m~~aDl 238 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFK--GK-DLKEIYGDI-SEF-EISY----DTHKALLEAEF 238 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCc--HH-HHHHHHhcC-CCc-EEec----cHHHHHHhhhH
Confidence 444 5555432 2 3456777799988876556777777653 22 222222111 111 1221 23479999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCcEEEe
Q 006091 546 LLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (662)
Q Consensus 546 ~v~PS~~E~fgl~~lEAma~G~PvVas 572 (662)
.+..| |.+.+|++.+|+|.|..
T Consensus 239 al~~S-----GT~TLE~al~g~P~Vv~ 260 (347)
T PRK14089 239 AFICS-----GTATLEAALIGTPFVLA 260 (347)
T ss_pred HHhcC-----cHHHHHHHHhCCCEEEE
Confidence 99877 88999999999999995
No 142
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=96.89 E-value=0.039 Score=64.28 Aligned_cols=205 Identities=14% Similarity=0.110 Sum_probs=126.8
Q ss_pred CCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhc
Q 006091 414 KSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEI 493 (662)
Q Consensus 414 ~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l 493 (662)
...+..+|-|+|...+...... .....-..+++..+ .++.+|+-+-|++..||+..=+.|+.++
T Consensus 238 ~~~v~~~pigid~~r~v~~~~~-----------~~~~~~~~ei~~~~-----~g~klilgvD~~d~~kg~~~Kl~a~e~~ 301 (732)
T KOG1050|consen 238 DVSVKALPIGIDVQRFVKLLEL-----------PYVGSKGMEIKEPF-----KGKKLILGVDRLDSIKGIQLKLLAFEQF 301 (732)
T ss_pred eeeeeecccccchHHhhccccc-----------hhHHHHHHHHhhhc-----cCCceEecccccccccCchHHHHHHHHH
Confidence 4567788999998776533211 11111223444443 2677889999999999998888888877
Q ss_pred cCC------CeEEEEEeCCC----hhhHHHHHHHHhh-------cCC---cEE--EEcCCChHHHHHHHHhcCEEEEcCC
Q 006091 494 LAD------DIQFVMLGSGD----PQFESWMRDTEAT-------YKD---KYR--GWVGFNVPISHRITAGCDILLMPSR 551 (662)
Q Consensus 494 ~~~------d~~lvivG~g~----~~~~~~~~~l~~~-------~~~---~~~--~~~~~~~~~~~~ll~~aDi~v~PS~ 551 (662)
.++ .+.++.+..+. +.+++....+... ... ..+ ....++..++-+++..+|+.+..+.
T Consensus 302 L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~ 381 (732)
T KOG1050|consen 302 LEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSW 381 (732)
T ss_pred HHhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeeccc
Confidence 652 55555555432 2233333332221 110 111 1112344556689999999999999
Q ss_pred CCCCcHHHHHHHHcC----CcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHH
Q 006091 552 FEPCGLNQLYAMRYG----TIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWE 627 (662)
Q Consensus 552 ~E~fgl~~lEAma~G----~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~ 627 (662)
.+|..++.+|+.+|. .+.|.+..-|..+..++ .-.++.+-|.+.++.+|..+++...+..+.+.
T Consensus 382 rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d------------~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~ 449 (732)
T KOG1050|consen 382 RDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLED------------AAIVVNPWDGDEFAILISKALTMSDEERELRE 449 (732)
T ss_pred ccccchhhhHHHHhhcccCCceEEeeeccccccccc------------cCEEECCcchHHHHHHHHHHhhcCHHHHhhcc
Confidence 999999999999984 55666766666666644 55677888899999999999986544333333
Q ss_pred HHHHHH--HHhcCCHHHHHHH
Q 006091 628 GLMRRG--MEKDYTWENAAIQ 646 (662)
Q Consensus 628 ~l~~~~--~~~~fs~e~~a~~ 646 (662)
...... ...-..|.+...+
T Consensus 450 ~~~~~~v~~~~~~~W~~~~~~ 470 (732)
T KOG1050|consen 450 PKHYKYVSTHDVVYWAKSFLQ 470 (732)
T ss_pred hhhhhhhcchhHHHHHHHHHH
Confidence 222221 2344455555544
No 143
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=96.80 E-value=1.2 Score=49.29 Aligned_cols=128 Identities=9% Similarity=0.105 Sum_probs=72.1
Q ss_pred HHHHHHHHhccCCCeEEEEEeCC------ChhhHHHHHHHHhhcC--CcEEEEc-CCChHHHHHHHHhcCEEEEcCCCCC
Q 006091 484 DLIRLAAPEILADDIQFVMLGSG------DPQFESWMRDTEATYK--DKYRGWV-GFNVPISHRITAGCDILLMPSRFEP 554 (662)
Q Consensus 484 d~Ll~A~~~l~~~d~~lvivG~g------~~~~~~~~~~l~~~~~--~~~~~~~-~~~~~~~~~ll~~aDi~v~PS~~E~ 554 (662)
..+.+++..+.+.+.+++++-.- .+......+.+..... .++.... .++..++..++++||+++-.-.+
T Consensus 260 ~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~RlH-- 337 (426)
T PRK10017 260 KAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVSDPARYHVVMDELNDLEMGKILGACELTVGTRLH-- 337 (426)
T ss_pred HHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhcccccceeEecCCCChHHHHHHHhhCCEEEEecch--
Confidence 44566667666667666665431 1122222334433332 2222222 24555666899999999876665
Q ss_pred CcHHHHHHHHcCCcEEEeCC-cccccccccccccccCCCCccceEEE--CCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 006091 555 CGLNQLYAMRYGTIPVVHAT-GGLRDTVENFNPFAREGSGEGTGWSF--LPLSEESMLTALRFAIRTYREHKSSWEGL 629 (662)
Q Consensus 555 fgl~~lEAma~G~PvVas~~-gg~~eii~~~~~~~~~~~~~~~G~l~--~~~d~~~la~aI~~~l~~~~~~~~~~~~l 629 (662)
+++=|++.|+|+|+-.. .-+..++.+. +...+++ ...+.+++.+.+.++++ +++.+++.
T Consensus 338 ---a~I~a~~~gvP~i~i~Y~~K~~~~~~~l---------g~~~~~~~~~~l~~~~Li~~v~~~~~----~r~~~~~~ 399 (426)
T PRK10017 338 ---SAIISMNFGTPAIAINYEHKSAGIMQQL---------GLPEMAIDIRHLLDGSLQAMVADTLG----QLPALNAR 399 (426)
T ss_pred ---HHHHHHHcCCCEEEeeehHHHHHHHHHc---------CCccEEechhhCCHHHHHHHHHHHHh----CHHHHHHH
Confidence 66779999999999542 2233333331 2223433 34456788888888876 55544443
No 144
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=96.58 E-value=0.0012 Score=68.31 Aligned_cols=68 Identities=15% Similarity=0.279 Sum_probs=52.4
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCC
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGG 222 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 222 (662)
|+||+|+.-.+||. .||++..+++|.+.|.+.-..|..|++... ..+...|.-..++.....+.+.+.
T Consensus 1 ~~V~ll~EGtYPyv-~GGVSsW~~~LI~glpe~~F~v~~i~a~~~--~~~~~~y~lP~NV~~v~~v~L~~~ 68 (268)
T PF11997_consen 1 MDVCLLTEGTYPYV-RGGVSSWVHQLIRGLPEHEFHVYAIGANPE--DYGEPRYELPENVVEVREVPLWGE 68 (268)
T ss_pred CeEEEEecCcCCCC-CCchhHHHHHHHhcCCCceEEEEEEeCCcc--ccCCCcccCCCCcceEEEEECCCc
Confidence 89999999999985 999999999999999998888888776632 223456766666666666666543
No 145
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=95.81 E-value=3 Score=44.23 Aligned_cols=114 Identities=11% Similarity=0.160 Sum_probs=75.3
Q ss_pred CEEEEEec-CCCccCHHHHHHHHHhccCCCeEEEEE-eCC--ChhhHHHHHHHHhh-cCC-cEEEEcCC-ChHHHHHHHH
Q 006091 469 PLIGFIGR-LDYQKGIDLIRLAAPEILADDIQFVML-GSG--DPQFESWMRDTEAT-YKD-KYRGWVGF-NVPISHRITA 541 (662)
Q Consensus 469 ~~Il~vGr-l~~~Kg~d~Ll~A~~~l~~~d~~lviv-G~g--~~~~~~~~~~l~~~-~~~-~~~~~~~~-~~~~~~~ll~ 541 (662)
++-+.+|+ -++..+.-.+++++......++++++- |-| +..|.+.+...... ... ++.....+ +-++--++++
T Consensus 185 ~ltILvGNSgd~sNnHieaL~~L~~~~~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~ 264 (360)
T PF07429_consen 185 KLTILVGNSGDPSNNHIEALEALKQQFGDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLS 264 (360)
T ss_pred ceEEEEcCCCCCCccHHHHHHHHHHhcCCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHH
Confidence 34445554 567888988999888866668887773 433 44555555554443 332 34332222 2233347999
Q ss_pred hcCEEEEcCC-CCCCcHHHHHHHHcCCcEEEeCCccccccccc
Q 006091 542 GCDILLMPSR-FEPCGLNQLYAMRYGTIPVVHATGGLRDTVEN 583 (662)
Q Consensus 542 ~aDi~v~PS~-~E~fgl~~lEAma~G~PvVas~~gg~~eii~~ 583 (662)
.||+.++... ..+.|+..+ .+.+|+||+.++..-.-..+.+
T Consensus 265 ~cDl~if~~~RQQgiGnI~l-Ll~~G~~v~L~~~np~~~~l~~ 306 (360)
T PF07429_consen 265 RCDLGIFNHNRQQGIGNICL-LLQLGKKVFLSRDNPFWQDLKE 306 (360)
T ss_pred hCCEEEEeechhhhHhHHHH-HHHcCCeEEEecCChHHHHHHh
Confidence 9999999985 589998887 8999999999876555554544
No 146
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=95.06 E-value=0.81 Score=51.90 Aligned_cols=130 Identities=8% Similarity=-0.037 Sum_probs=78.7
Q ss_pred CCEEEEEecCCC-----ccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHH--
Q 006091 468 CPLIGFIGRLDY-----QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT-- 540 (662)
Q Consensus 468 ~~~Il~vGrl~~-----~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll-- 540 (662)
..+++..|.... .+-+..+++|++.+ +.++++...+.. .. .....++.+..|++ .. +++
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l---~~~viw~~~~~~-~~-----~~~p~Nv~i~~w~P--q~---~lL~h 362 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKL---PYNVLWKYDGEV-EA-----INLPANVLTQKWFP--QR---AVLKH 362 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhC---CCeEEEEECCCc-Cc-----ccCCCceEEecCCC--HH---HHhcC
Confidence 456667787643 23356677777766 457777655421 11 01122444556653 22 477
Q ss_pred HhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCC----cccccccccccccccCCCCccceEEECC--CCHHHHHHHHHH
Q 006091 541 AGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT----GGLRDTVENFNPFAREGSGEGTGWSFLP--LSEESMLTALRF 614 (662)
Q Consensus 541 ~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~----gg~~eii~~~~~~~~~~~~~~~G~l~~~--~d~~~la~aI~~ 614 (662)
..++++|.-. | ..++.||+.+|+|+|+-.. ......+.. -+.|..++. -+.+++.++|.+
T Consensus 363 p~v~~fItHG---G-~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~----------~G~G~~l~~~~~t~~~l~~ai~~ 428 (507)
T PHA03392 363 KNVKAFVTQG---G-VQSTDEAIDALVPMVGLPMMGDQFYNTNKYVE----------LGIGRALDTVTVSAAQLVLAIVD 428 (507)
T ss_pred CCCCEEEecC---C-cccHHHHHHcCCCEEECCCCccHHHHHHHHHH----------cCcEEEeccCCcCHHHHHHHHHH
Confidence 4688887433 3 4588999999999999643 233444444 467877764 356888999988
Q ss_pred HHHHhhhCHHHHHHH
Q 006091 615 AIRTYREHKSSWEGL 629 (662)
Q Consensus 615 ~l~~~~~~~~~~~~l 629 (662)
+++ ++..+++.
T Consensus 429 vl~----~~~y~~~a 439 (507)
T PHA03392 429 VIE----NPKYRKNL 439 (507)
T ss_pred HhC----CHHHHHHH
Confidence 886 55444433
No 147
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=94.76 E-value=0.59 Score=50.58 Aligned_cols=194 Identities=11% Similarity=0.066 Sum_probs=92.1
Q ss_pred HHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHH
Q 006091 378 GAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQ 457 (662)
Q Consensus 378 ~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r 457 (662)
......|.+++.|+...+.+. +.++....++ +..|..-... + .......+..++
T Consensus 130 ~~~~~~d~~~~~s~~~~~~~~---------~~f~~~~~~i--~~~G~PR~D~-------l--------~~~~~~~~~~i~ 183 (369)
T PF04464_consen 130 RNYRNYDYFIVSSEFEKEIFK---------KAFGYPEDKI--LVTGYPRNDY-------L--------FNKSKENRNRIK 183 (369)
T ss_dssp HHHTT-SEEEESSHHHHHHHH---------HHTT--GGGE--EES--GGGHH-------H--------HHSTT-HHHHHH
T ss_pred hhccCCcEEEECCHHHHHHHH---------HHhccCcceE--EEeCCCeEhH-------H--------hccCHHHHHHHH
Confidence 345678999999988776664 2334444444 4445421100 0 001111256788
Q ss_pred HHhCCCCCCCCCEEEEEecCCCccCH------H--HHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEc
Q 006091 458 KELGLPIRPDCPLIGFIGRLDYQKGI------D--LIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWV 529 (662)
Q Consensus 458 ~~lgl~~~~~~~~Il~vGrl~~~Kg~------d--~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~ 529 (662)
+.++++ .++.+|+|+=.+...... . .-.+.+..+...++.+++-.- |......... .....++...-
T Consensus 184 ~~~~~~--~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~~~~~~~~li~k~H--p~~~~~~~~~-~~~~~~i~~~~ 258 (369)
T PF04464_consen 184 KKLGID--KDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNFLLKNNYVLIIKPH--PNMKKKFKDF-KEDNSNIIFVS 258 (369)
T ss_dssp HHTT----SS-EEEEEE----GGG--GGSS----TT-HHHHHHHHTTTEEEEE--S--HHHHTT-----TT-TTTEEE-T
T ss_pred HHhccC--CCCcEEEEeeccccccccccccccccccCHHHHHHHhCCCcEEEEEeC--chhhhchhhh-hccCCcEEECC
Confidence 888887 677799998665543222 1 122333344456777776543 2222211111 12233443332
Q ss_pred CCChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEe--CCccc---ccccccccccccCCCCccceEEECCCC
Q 006091 530 GFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH--ATGGL---RDTVENFNPFAREGSGEGTGWSFLPLS 604 (662)
Q Consensus 530 ~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas--~~gg~---~eii~~~~~~~~~~~~~~~G~l~~~~d 604 (662)
+.+....++..||+++.= ++-++.|++.+++|||-- |..-. +....++. +...|-.+ .+
T Consensus 259 --~~~~~~~ll~~aDiLITD-----ySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~~-------~~~pg~~~--~~ 322 (369)
T PF04464_consen 259 --DNEDIYDLLAAADILITD-----YSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDYE-------EDLPGPIV--YN 322 (369)
T ss_dssp --T-S-HHHHHHT-SEEEES-----S-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-TT-------TSSSS-EE--SS
T ss_pred --CCCCHHHHHHhcCEEEEe-----chhHHHHHHHhCCCEEEEeccHHHHhhccCCCCchH-------hhCCCcee--CC
Confidence 233466899999999853 345999999999999964 33211 11111110 13456665 47
Q ss_pred HHHHHHHHHHHHHH
Q 006091 605 EESMLTALRFAIRT 618 (662)
Q Consensus 605 ~~~la~aI~~~l~~ 618 (662)
.++|.++|..++..
T Consensus 323 ~~eL~~~i~~~~~~ 336 (369)
T PF04464_consen 323 FEELIEAIENIIEN 336 (369)
T ss_dssp HHHHHHHHTTHHHH
T ss_pred HHHHHHHHHhhhhC
Confidence 89999999998874
No 148
>PLN02448 UDP-glycosyltransferase family protein
Probab=93.50 E-value=1.3 Score=49.69 Aligned_cols=127 Identities=10% Similarity=0.084 Sum_probs=70.5
Q ss_pred CCEEEEEecCCC--ccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCE
Q 006091 468 CPLIGFIGRLDY--QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 545 (662)
Q Consensus 468 ~~~Il~vGrl~~--~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi 545 (662)
..+++..|.... .+-+..++++++.+ +..|+++..++. ... .... ..+..+..|+ ++. ++|+..++
T Consensus 275 ~vvyvsfGs~~~~~~~~~~~~~~~l~~~---~~~~lw~~~~~~--~~~-~~~~-~~~~~v~~w~--pQ~---~iL~h~~v 342 (459)
T PLN02448 275 SVLYVSLGSFLSVSSAQMDEIAAGLRDS---GVRFLWVARGEA--SRL-KEIC-GDMGLVVPWC--DQL---KVLCHSSV 342 (459)
T ss_pred ceEEEeecccccCCHHHHHHHHHHHHhC---CCCEEEEEcCch--hhH-hHhc-cCCEEEeccC--CHH---HHhccCcc
Confidence 345666777643 22244455555544 778888765431 111 1111 1123344454 222 47877777
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCcEEEeC----CcccccccccccccccCCCCccceEEEC-------CCCHHHHHHHHHH
Q 006091 546 LLMPSRFEPCGLNQLYAMRYGTIPVVHA----TGGLRDTVENFNPFAREGSGEGTGWSFL-------PLSEESMLTALRF 614 (662)
Q Consensus 546 ~v~PS~~E~fgl~~lEAma~G~PvVas~----~gg~~eii~~~~~~~~~~~~~~~G~l~~-------~~d~~~la~aI~~ 614 (662)
.++-+. +=..+++||+++|+|+|+-. .......+.+ .-+.|+-+. ..+.+++++++++
T Consensus 343 ~~fvtH--gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~---------~~g~G~~~~~~~~~~~~~~~~~l~~av~~ 411 (459)
T PLN02448 343 GGFWTH--CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVE---------DWKIGWRVKREVGEETLVGREEIAELVKR 411 (459)
T ss_pred ceEEec--CchhHHHHHHHcCCCEEeccccccchhhHHHHHH---------HhCceEEEecccccCCcCcHHHHHHHHHH
Confidence 333331 22358999999999999954 3333344443 013566553 2367899999999
Q ss_pred HHH
Q 006091 615 AIR 617 (662)
Q Consensus 615 ~l~ 617 (662)
++.
T Consensus 412 vl~ 414 (459)
T PLN02448 412 FMD 414 (459)
T ss_pred Hhc
Confidence 986
No 149
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=92.90 E-value=8 Score=40.97 Aligned_cols=117 Identities=15% Similarity=0.046 Sum_probs=67.6
Q ss_pred HHHHHHhCCCCCCCCCEEEEEecCCCcc--CHH---HHHHHHHhccC-CCeEEEEEeCC--ChhhHHHHHHHHhhcCCcE
Q 006091 454 IALQKELGLPIRPDCPLIGFIGRLDYQK--GID---LIRLAAPEILA-DDIQFVMLGSG--DPQFESWMRDTEATYKDKY 525 (662)
Q Consensus 454 ~~~r~~lgl~~~~~~~~Il~vGrl~~~K--g~d---~Ll~A~~~l~~-~d~~lvivG~g--~~~~~~~~~~l~~~~~~~~ 525 (662)
.++..+++-. +...+.+.+|--...- +.+ .+++.+..+.+ ....+.|..+. +++....++..... ...+
T Consensus 135 ~~~~~~~~~l--~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRRTp~~~~~~L~~~~~~-~~~~ 211 (311)
T PF06258_consen 135 AAWAPRLAAL--PRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTTSRRTPPEAEAALRELLKD-NPGV 211 (311)
T ss_pred HhhhhhhccC--CCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCCCcHHHHHHHHHhhcC-CCce
Confidence 4455555522 3445556677533322 223 55566655544 36789998885 23333333333221 2233
Q ss_pred EEEcCCChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcc
Q 006091 526 RGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG 576 (662)
Q Consensus 526 ~~~~~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg 576 (662)
..|-+-.+.=...+|+.||.++++.-. -.-+.||.+.|+||.+-...+
T Consensus 212 ~~~~~~~~nPy~~~La~ad~i~VT~DS---vSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 212 YIWDGTGENPYLGFLAAADAIVVTEDS---VSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred EEecCCCCCcHHHHHHhCCEEEEcCcc---HHHHHHHHHcCCCEEEecCCC
Confidence 334332222234799999999988633 346789999999999987665
No 150
>PLN03004 UDP-glycosyltransferase
Probab=91.93 E-value=1.9 Score=48.05 Aligned_cols=131 Identities=13% Similarity=0.060 Sum_probs=74.8
Q ss_pred CCCEEEEEecCCC--ccCHHHHHHHHHhccCCCeEEEEEeCCCh-------hh-----HHHHHHHHhhcCCcEEEEcCCC
Q 006091 467 DCPLIGFIGRLDY--QKGIDLIRLAAPEILADDIQFVMLGSGDP-------QF-----ESWMRDTEATYKDKYRGWVGFN 532 (662)
Q Consensus 467 ~~~~Il~vGrl~~--~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~-------~~-----~~~~~~l~~~~~~~~~~~~~~~ 532 (662)
..-+++..|.+.. .+-+..|..+++.. ...|+++=..+. .. +.+.+... ..+..+..|++
T Consensus 270 ~sVvyvsfGS~~~~~~~q~~ela~gL~~s---~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~-~~g~~v~~W~P-- 343 (451)
T PLN03004 270 KSVVFLCFGSLGLFSKEQVIEIAVGLEKS---GQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTE-DKGMVVKSWAP-- 343 (451)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHC---CCCEEEEEcCCccccccccchhhhCChHHHHhcc-CCcEEEEeeCC--
Confidence 3455666677632 44556666666665 345666544210 01 11122211 12233446663
Q ss_pred hHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEe----CCcccccccccccccccCCCCccceEEECC-----C
Q 006091 533 VPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH----ATGGLRDTVENFNPFAREGSGEGTGWSFLP-----L 603 (662)
Q Consensus 533 ~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas----~~gg~~eii~~~~~~~~~~~~~~~G~l~~~-----~ 603 (662)
+. ++++.+++.++-+. +=-++++||+++|+|+|+- |.......+.+ .-+.|+.++. .
T Consensus 344 Q~---~iL~H~~v~~FvTH--~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~---------~~g~g~~l~~~~~~~~ 409 (451)
T PLN03004 344 QV---PVLNHKAVGGFVTH--CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVD---------EIKIAISMNESETGFV 409 (451)
T ss_pred HH---HHhCCCccceEecc--CcchHHHHHHHcCCCEEeccccccchhhHHHHHH---------HhCceEEecCCcCCcc
Confidence 22 48898998544442 1234899999999999995 34444444543 0257777642 3
Q ss_pred CHHHHHHHHHHHHH
Q 006091 604 SEESMLTALRFAIR 617 (662)
Q Consensus 604 d~~~la~aI~~~l~ 617 (662)
+.++++++|++++.
T Consensus 410 ~~e~l~~av~~vm~ 423 (451)
T PLN03004 410 SSTEVEKRVQEIIG 423 (451)
T ss_pred CHHHHHHHHHHHhc
Confidence 68899999998885
No 151
>PLN02210 UDP-glucosyl transferase
Probab=91.25 E-value=2.7 Score=47.09 Aligned_cols=133 Identities=10% Similarity=0.013 Sum_probs=70.0
Q ss_pred CCEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEE-eCCC-hhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCE
Q 006091 468 CPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVML-GSGD-PQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 545 (662)
Q Consensus 468 ~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lviv-G~g~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi 545 (662)
..+++..|.+... ..+.+-+.+..|...+.+|+++ +... ..............+..+.+|++ +. .+|+.+.+
T Consensus 270 svvyvsfGS~~~~-~~~~~~e~a~~l~~~~~~flw~~~~~~~~~~~~~~~~~~~~~~g~v~~w~P--Q~---~iL~h~~v 343 (456)
T PLN02210 270 SVVYISFGSMLES-LENQVETIAKALKNRGVPFLWVIRPKEKAQNVQVLQEMVKEGQGVVLEWSP--QE---KILSHMAI 343 (456)
T ss_pred ceEEEEecccccC-CHHHHHHHHHHHHhCCCCEEEEEeCCccccchhhHHhhccCCCeEEEecCC--HH---HHhcCcCc
Confidence 3456667876532 3344444444444446676664 3211 11111111111112233555653 22 47888874
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCcEEEeC----CcccccccccccccccCCCCccceEEEC------CCCHHHHHHHHHHH
Q 006091 546 LLMPSRFEPCGLNQLYAMRYGTIPVVHA----TGGLRDTVENFNPFAREGSGEGTGWSFL------PLSEESMLTALRFA 615 (662)
Q Consensus 546 ~v~PS~~E~fgl~~lEAma~G~PvVas~----~gg~~eii~~~~~~~~~~~~~~~G~l~~------~~d~~~la~aI~~~ 615 (662)
.++-+.- | -.+++||+.+|+|+|+-. ..-....+.+ .-+.|..+. ..+.++++++|+++
T Consensus 344 g~FitH~-G-~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~---------~~g~G~~l~~~~~~~~~~~~~l~~av~~~ 412 (456)
T PLN02210 344 SCFVTHC-G-WNSTIETVVAGVPVVAYPSWTDQPIDARLLVD---------VFGIGVRMRNDAVDGELKVEEVERCIEAV 412 (456)
T ss_pred CeEEeeC-C-cccHHHHHHcCCCEEecccccccHHHHHHHHH---------HhCeEEEEeccccCCcCCHHHHHHHHHHH
Confidence 4433311 2 238899999999999953 3333333432 025676663 24678999999998
Q ss_pred HH
Q 006091 616 IR 617 (662)
Q Consensus 616 l~ 617 (662)
+.
T Consensus 413 m~ 414 (456)
T PLN02210 413 TE 414 (456)
T ss_pred hc
Confidence 85
No 152
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=91.12 E-value=20 Score=36.86 Aligned_cols=158 Identities=15% Similarity=0.031 Sum_probs=78.7
Q ss_pred HHHHHhCCCCCCCCCEE---EEEecCCCccCHHHHHHHHHhccCC-CeEEEEEeCCC-hhhHHHHHH-------------
Q 006091 455 ALQKELGLPIRPDCPLI---GFIGRLDYQKGIDLIRLAAPEILAD-DIQFVMLGSGD-PQFESWMRD------------- 516 (662)
Q Consensus 455 ~~r~~lgl~~~~~~~~I---l~vGrl~~~Kg~d~Ll~A~~~l~~~-d~~lvivG~g~-~~~~~~~~~------------- 516 (662)
+.|..+... ...+.. +|+||..-.||+..+++.-++..++ +..-+|-|-.. +..-.....
T Consensus 169 ~~Rstywkd--~se~nmnv~~yigR~Tt~kG~~~mfD~h~~~lK~~~~~t~~~GierS~A~~~i~d~~~~~~y~~~~~~~ 246 (355)
T PF11440_consen 169 KYRSTYWKD--VSEKNMNVNRYIGRQTTWKGPRRMFDLHEKILKPAGFKTIMEGIERSPAKISIKDHGIPYEYYPKLDCD 246 (355)
T ss_dssp HHHHHH-----GGGSEEEEEEEE--SSGGG-HHHHHHHHHHTTTTTT-EEEEE---SSTHHHHHHHTT--EEEE-CTGGG
T ss_pred HHHHHHhhh--hHhhhcccceeeeeeeeecCcHHHhhhHHHhcCCcchhHHhhhhhcCCceeeeecCCcccccCcccccc
Confidence 444444432 234444 7999999999999999998877664 77888877532 111111111
Q ss_pred -HHhhcCCcEEEEcCCChHHHHHHHHhcCEEEEcCC------CCCCcHHHHHHHHcCCcEEEe-CCcccccccccccccc
Q 006091 517 -TEATYKDKYRGWVGFNVPISHRITAGCDILLMPSR------FEPCGLNQLYAMRYGTIPVVH-ATGGLRDTVENFNPFA 588 (662)
Q Consensus 517 -l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~PS~------~E~fgl~~lEAma~G~PvVas-~~gg~~eii~~~~~~~ 588 (662)
..-..+.-...+-++-.++....|+.+-+...-+. .+..-.+.+|..|||+.+|-- ..|-..-.--|=.+++
T Consensus 247 ~~~~~pN~~~~v~~~Yi~~E~~~~Maks~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~ 326 (355)
T PF11440_consen 247 EPKPAPNSPVPVYGPYIRSEGLERMAKSLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYI 326 (355)
T ss_dssp G---SSS--EEEESS--HHHHHHHHHTEEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGG
T ss_pred CcccCCCCcceecchhhhHHHHHHHhhccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceee
Confidence 00001112223334544555578888888776653 235677999999999988873 3442222111100111
Q ss_pred cCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 589 REGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 589 ~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
. -....+.++..|.++..+.|.++..
T Consensus 327 ~---~~~~~I~~De~dle~T~ekl~E~a~ 352 (355)
T PF11440_consen 327 D---HPYSAIYFDENDLESTVEKLIEVAN 352 (355)
T ss_dssp S---S--S-EEE-TTSHHHHHHHHHHHHT
T ss_pred c---cCcceeEeccchHHHHHHHHHHHhc
Confidence 0 0234567888999998888887653
No 153
>PLN02670 transferase, transferring glycosyl groups
Probab=91.02 E-value=4.2 Score=45.64 Aligned_cols=162 Identities=9% Similarity=0.069 Sum_probs=86.5
Q ss_pred CCEEEEEecCCC--ccCHHHHHHHHHhccCCCeEEEEEeCCChh---------hHHHHHHHHhhcCCcEEEEcCCChHHH
Q 006091 468 CPLIGFIGRLDY--QKGIDLIRLAAPEILADDIQFVMLGSGDPQ---------FESWMRDTEATYKDKYRGWVGFNVPIS 536 (662)
Q Consensus 468 ~~~Il~vGrl~~--~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~---------~~~~~~~l~~~~~~~~~~~~~~~~~~~ 536 (662)
.-+.+..|.+.. .+-+..|..++..+ ...|+++=..+.. .+.+.+.+.. ....+.+|++ +.
T Consensus 279 sVvyvsfGS~~~l~~~q~~ela~gl~~s---~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~-rG~vv~~W~P--Q~-- 350 (472)
T PLN02670 279 SVVYVALGTEASLRREEVTELALGLEKS---ETPFFWVLRNEPGTTQNALEMLPDGFEERVKG-RGMIHVGWVP--QV-- 350 (472)
T ss_pred ceEEEEecccccCCHHHHHHHHHHHHHC---CCCEEEEEcCCcccccchhhcCChHHHHhccC-CCeEEeCcCC--HH--
Confidence 445566677653 34455566666655 3456665332100 0111221111 1112234553 22
Q ss_pred HHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeC----CcccccccccccccccCCCCccceEEECC------CCHH
Q 006091 537 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA----TGGLRDTVENFNPFAREGSGEGTGWSFLP------LSEE 606 (662)
Q Consensus 537 ~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~----~gg~~eii~~~~~~~~~~~~~~~G~l~~~------~d~~ 606 (662)
++|+...+..+-+. +=-++++||+++|+|+|+-. .......+.+ -+.|+.++. -+.+
T Consensus 351 -~IL~H~~v~~FvtH--cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~----------~g~Gv~l~~~~~~~~~~~e 417 (472)
T PLN02670 351 -KILSHESVGGFLTH--CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHG----------KKLGLEVPRDERDGSFTSD 417 (472)
T ss_pred -HHhcCcccceeeec--CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHH----------cCeeEEeeccccCCcCcHH
Confidence 47777777444441 12358999999999999953 3334444444 467777643 3588
Q ss_pred HHHHHHHHHHHHhhhCH---HHHHHHHHH--HHHhcCCHHHHHHHHHHHHHHh
Q 006091 607 SMLTALRFAIRTYREHK---SSWEGLMRR--GMEKDYTWENAAIQYEQVFEWA 654 (662)
Q Consensus 607 ~la~aI~~~l~~~~~~~---~~~~~l~~~--~~~~~fs~e~~a~~~~~iy~~~ 654 (662)
++.++|++++. ++ +.+++..+- .+...=+.+++++.+++.+.+.
T Consensus 418 ~i~~av~~vm~----~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 418 SVAESVRLAMV----DDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLREN 466 (472)
T ss_pred HHHHHHHHHhc----CcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHh
Confidence 99999999985 32 222222211 1344555666777776655543
No 154
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=90.97 E-value=4.9 Score=45.26 Aligned_cols=40 Identities=20% Similarity=0.152 Sum_probs=29.7
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecC
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 195 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~ 195 (662)
.+++|+++-. |- +| =-.=+.+||+.|+.+|+.|+++++..
T Consensus 8 ~~~HVvl~Pf---pa--qG-Hi~P~l~LAk~La~~G~~VTfv~T~~ 47 (477)
T PLN02863 8 AGTHVLVFPF---PA--QG-HMIPLLDLTHRLALRGLTITVLVTPK 47 (477)
T ss_pred CCCEEEEecC---cc--cc-hHHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 4578888742 32 33 44456899999999999999998764
No 155
>PLN02562 UDP-glycosyltransferase
Probab=90.97 E-value=2.2 Score=47.65 Aligned_cols=129 Identities=8% Similarity=-0.031 Sum_probs=75.0
Q ss_pred CCEEEEEecCC---CccCHHHHHHHHHhccCCCeEEEEE-eCCC--hhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH
Q 006091 468 CPLIGFIGRLD---YQKGIDLIRLAAPEILADDIQFVML-GSGD--PQFESWMRDTEATYKDKYRGWVGFNVPISHRITA 541 (662)
Q Consensus 468 ~~~Il~vGrl~---~~Kg~d~Ll~A~~~l~~~d~~lviv-G~g~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~ 541 (662)
..+++..|... +.+-+..++.+++.+ ..+|+++ ..+. ...+...+.+ ..+..+.+|++ +. .+|+
T Consensus 274 svvyvsfGS~~~~~~~~~~~~l~~~l~~~---g~~fiW~~~~~~~~~l~~~~~~~~--~~~~~v~~w~P--Q~---~iL~ 343 (448)
T PLN02562 274 SVIYISFGSWVSPIGESNVRTLALALEAS---GRPFIWVLNPVWREGLPPGYVERV--SKQGKVVSWAP--QL---EVLK 343 (448)
T ss_pred ceEEEEecccccCCCHHHHHHHHHHHHHC---CCCEEEEEcCCchhhCCHHHHHHh--ccCEEEEecCC--HH---HHhC
Confidence 34666778754 344566666666665 4466653 3221 0111122222 22345566663 22 4788
Q ss_pred hcCEEEEcCCCCCCcHHHHHHHHcCCcEEEe----CCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 542 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVH----ATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 542 ~aDi~v~PS~~E~fgl~~lEAma~G~PvVas----~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
..++.++-+. +=-.+.+||+.+|+|+|+- |.......+.+ .-+.|+-+...+.++++++|++++.
T Consensus 344 h~~v~~fvtH--~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~---------~~g~g~~~~~~~~~~l~~~v~~~l~ 412 (448)
T PLN02562 344 HQAVGCYLTH--CGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVD---------VWKIGVRISGFGQKEVEEGLRKVME 412 (448)
T ss_pred CCccceEEec--CcchhHHHHHHcCCCEEeCCcccchHHHHHHHHH---------HhCceeEeCCCCHHHHHHHHHHHhC
Confidence 7776444332 2245899999999999985 33344444443 0256777666688999999999985
No 156
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=90.81 E-value=3.5 Score=43.85 Aligned_cols=111 Identities=18% Similarity=0.173 Sum_probs=67.3
Q ss_pred HHHHHHHhCCCCCCCCCEE-EEEec-CCCccCH--HHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEE
Q 006091 453 KIALQKELGLPIRPDCPLI-GFIGR-LDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGW 528 (662)
Q Consensus 453 k~~~r~~lgl~~~~~~~~I-l~vGr-l~~~Kg~--d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~ 528 (662)
+..+..+++++ +++++| +..|. ..+.|.+ +...+.+..+.+.+.+++++|+.. + .+..+.+...........
T Consensus 161 ~~~~~~~~~~~--~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~-e-~~~~~~i~~~~~~~~~~l 236 (334)
T TIGR02195 161 QAAALAKFGLD--TERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAK-D-HPAGNEIEALLPGELRNL 236 (334)
T ss_pred HHHHHHHcCCC--CCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChh-h-HHHHHHHHHhCCcccccC
Confidence 34456666665 344544 55555 4467765 477788877766678999998763 2 233344443332222222
Q ss_pred cCC-ChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEe
Q 006091 529 VGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (662)
Q Consensus 529 ~~~-~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas 572 (662)
.+- +-.++..+++.||++|..-. | .+==|.|.|+|+|+-
T Consensus 237 ~g~~sL~el~ali~~a~l~I~~DS----G-p~HlAaA~~~P~i~l 276 (334)
T TIGR02195 237 AGETSLDEAVDLIALAKAVVTNDS----G-LMHVAAALNRPLVAL 276 (334)
T ss_pred CCCCCHHHHHHHHHhCCEEEeeCC----H-HHHHHHHcCCCEEEE
Confidence 232 33556789999999997652 2 222278999999984
No 157
>PLN02173 UDP-glucosyl transferase family protein
Probab=90.63 E-value=4.8 Score=44.94 Aligned_cols=128 Identities=8% Similarity=0.031 Sum_probs=68.7
Q ss_pred CEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeC-C-Ch-hhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCE
Q 006091 469 PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGS-G-DP-QFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 545 (662)
Q Consensus 469 ~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~-g-~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi 545 (662)
.+.+..|.+.. -..+.+.+.+..|...+ |+++=. . .. ..+...+... ..+..+.+|.+ +. ++|+...+
T Consensus 266 vvyvsfGS~~~-~~~~~~~ela~gLs~~~--flWvvr~~~~~~lp~~~~~~~~-~~~~~i~~W~P--Q~---~iL~H~~v 336 (449)
T PLN02173 266 VVYIAFGSMAK-LSSEQMEEIASAISNFS--YLWVVRASEESKLPPGFLETVD-KDKSLVLKWSP--QL---QVLSNKAI 336 (449)
T ss_pred eEEEEeccccc-CCHHHHHHHHHHhcCCC--EEEEEeccchhcccchHHHhhc-CCceEEeCCCC--HH---HHhCCCcc
Confidence 45566787653 23345555555553334 333322 1 10 1111222221 12334455553 22 47888775
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCcEEEeC----CcccccccccccccccCCCCc-cceEEECC------CCHHHHHHHHHH
Q 006091 546 LLMPSRFEPCGLNQLYAMRYGTIPVVHA----TGGLRDTVENFNPFAREGSGE-GTGWSFLP------LSEESMLTALRF 614 (662)
Q Consensus 546 ~v~PS~~E~fgl~~lEAma~G~PvVas~----~gg~~eii~~~~~~~~~~~~~-~~G~l~~~------~d~~~la~aI~~ 614 (662)
.++-+. +=.++++||+++|+|+|+-. ..-....+.+ . +.|+-+.. -+.+++++++++
T Consensus 337 ~~FvtH--cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~----------~~g~Gv~v~~~~~~~~~~~e~v~~av~~ 404 (449)
T PLN02173 337 GCFMTH--CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQD----------VWKVGVRVKAEKESGIAKREEIEFSIKE 404 (449)
T ss_pred ceEEec--CccchHHHHHHcCCCEEecCchhcchHHHHHHHH----------HhCceEEEeecccCCcccHHHHHHHHHH
Confidence 554442 22358999999999999953 3333444443 2 46665532 267999999999
Q ss_pred HHH
Q 006091 615 AIR 617 (662)
Q Consensus 615 ~l~ 617 (662)
++.
T Consensus 405 vm~ 407 (449)
T PLN02173 405 VME 407 (449)
T ss_pred Hhc
Confidence 985
No 158
>PLN02554 UDP-glycosyltransferase family protein
Probab=89.69 E-value=7.1 Score=44.05 Aligned_cols=125 Identities=14% Similarity=0.106 Sum_probs=67.9
Q ss_pred CEEEEEecCCC--ccCHHHHHHHHHhccCCCeEEEEEeCCCh------------h-----hHHHHHHHHhhcCCcEEEEc
Q 006091 469 PLIGFIGRLDY--QKGIDLIRLAAPEILADDIQFVMLGSGDP------------Q-----FESWMRDTEATYKDKYRGWV 529 (662)
Q Consensus 469 ~~Il~vGrl~~--~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~------------~-----~~~~~~~l~~~~~~~~~~~~ 529 (662)
.+++..|.+.. .+-+..++.+++.+ +.+|+++-.++. . .+...+.. ..+..+.+|+
T Consensus 276 vvyvsfGS~~~~~~~~~~~la~~l~~~---~~~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~--~~~g~v~~W~ 350 (481)
T PLN02554 276 VVFLCFGSMGGFSEEQAREIAIALERS---GHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRT--KDIGKVIGWA 350 (481)
T ss_pred EEEEeccccccCCHHHHHHHHHHHHHc---CCCeEEEEcCCcccccccccccccchhhhCChHHHHHh--ccCceEEeeC
Confidence 45566677633 44566666676665 456666532210 0 01111111 1234556676
Q ss_pred CCChHHHHHHHHh--cCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCC----cccc-cccccccccccCCCCccceEEEC-
Q 006091 530 GFNVPISHRITAG--CDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT----GGLR-DTVENFNPFAREGSGEGTGWSFL- 601 (662)
Q Consensus 530 ~~~~~~~~~ll~~--aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~----gg~~-eii~~~~~~~~~~~~~~~G~l~~- 601 (662)
+ +. .+|+. +.+||.-. | -.+++||+.+|+|+|+-.. -... .+++. -+.|..++
T Consensus 351 P--Q~---~iL~H~~v~~FvtH~---G-~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~----------~g~Gv~l~~ 411 (481)
T PLN02554 351 P--QV---AVLAKPAIGGFVTHC---G-WNSILESLWFGVPMAAWPLYAEQKFNAFEMVEE----------LGLAVEIRK 411 (481)
T ss_pred C--HH---HHhCCcccCcccccC---c-cchHHHHHHcCCCEEecCccccchhhHHHHHHH----------hCceEEeec
Confidence 3 22 46743 33344221 2 3489999999999999542 2233 22333 34565553
Q ss_pred ------------CCCHHHHHHHHHHHHH
Q 006091 602 ------------PLSEESMLTALRFAIR 617 (662)
Q Consensus 602 ------------~~d~~~la~aI~~~l~ 617 (662)
.-+.++++++|++++.
T Consensus 412 ~~~~~~~~~~~~~~~~e~l~~av~~vm~ 439 (481)
T PLN02554 412 YWRGDLLAGEMETVTAEEIERGIRCLME 439 (481)
T ss_pred cccccccccccCeEcHHHHHHHHHHHhc
Confidence 2367889999998884
No 159
>PLN03007 UDP-glucosyltransferase family protein
Probab=89.47 E-value=6.6 Score=44.31 Aligned_cols=39 Identities=13% Similarity=0.146 Sum_probs=29.7
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
++++|+++.. |- -|=-.=+.+||+.|+.+|++|+++++.
T Consensus 4 ~~~hVvlvp~---pa---~GHi~P~L~LAk~L~~rG~~VT~vtt~ 42 (482)
T PLN03007 4 EKLHILFFPF---MA---HGHMIPTLDMAKLFSSRGAKSTILTTP 42 (482)
T ss_pred CCcEEEEECC---Cc---cccHHHHHHHHHHHHhCCCEEEEEECC
Confidence 4578998863 32 233445789999999999999999876
No 160
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=89.18 E-value=2.6 Score=43.31 Aligned_cols=90 Identities=14% Similarity=0.242 Sum_probs=59.6
Q ss_pred EEEEEecCCCccCHHHHHHHHHhccCCCeEEEE-EeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEEE
Q 006091 470 LIGFIGRLDYQKGIDLIRLAAPEILADDIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLM 548 (662)
Q Consensus 470 ~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvi-vG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~ 548 (662)
+++..|.- ..|+ +.++.++.|.+.++.+-+ +|++++.+....+......+.++ +. +.+.+.++|..||..+.
T Consensus 161 ilI~lGGs-Dpk~--lt~kvl~~L~~~~~nl~iV~gs~~p~l~~l~k~~~~~~~i~~--~~--~~~dma~LMke~d~aI~ 233 (318)
T COG3980 161 ILITLGGS-DPKN--LTLKVLAELEQKNVNLHIVVGSSNPTLKNLRKRAEKYPNINL--YI--DTNDMAELMKEADLAIS 233 (318)
T ss_pred EEEEccCC-Chhh--hHHHHHHHhhccCeeEEEEecCCCcchhHHHHHHhhCCCeee--Ee--cchhHHHHHHhcchhee
Confidence 45555543 3444 456677777655655444 57777777776666655443333 33 44457789999999986
Q ss_pred cCCCCCCcHHHHHHHHcCCcEEE
Q 006091 549 PSRFEPCGLNQLYAMRYGTIPVV 571 (662)
Q Consensus 549 PS~~E~fgl~~lEAma~G~PvVa 571 (662)
.. |.++.||...|+|.++
T Consensus 234 Aa-----GstlyEa~~lgvP~l~ 251 (318)
T COG3980 234 AA-----GSTLYEALLLGVPSLV 251 (318)
T ss_pred cc-----chHHHHHHHhcCCceE
Confidence 54 8899999999999443
No 161
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=89.12 E-value=6.6 Score=41.44 Aligned_cols=99 Identities=13% Similarity=0.001 Sum_probs=61.1
Q ss_pred CCCEEEEEecCCCccCH--HHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcC-CcEEEEcCCChHHHHHHHHhc
Q 006091 467 DCPLIGFIGRLDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWVGFNVPISHRITAGC 543 (662)
Q Consensus 467 ~~~~Il~vGrl~~~Kg~--d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~ll~~a 543 (662)
.+.++++.|.=.+.|.+ +...+.+..+.+.+.+++++|+++.+ .+..+.+..... ..+.+.. +-.++.++++.|
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~e-~~~~~~i~~~~~~~~l~g~~--sL~el~ali~~a 255 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDAE-KQRAERIAEALPGAVVLPKM--SLAEVAALLAGA 255 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHHH-HHHHHHHHhhCCCCeecCCC--CHHHHHHHHHcC
Confidence 34456667755577765 57778887776667889988655432 233344433322 2222222 334566899999
Q ss_pred CEEEEcCCCCCCcHHHHHHHHcCCcEEEeC
Q 006091 544 DILLMPSRFEPCGLNQLYAMRYGTIPVVHA 573 (662)
Q Consensus 544 Di~v~PS~~E~fgl~~lEAma~G~PvVas~ 573 (662)
|++|.+- +-++=+ |.|.|+|+|+--
T Consensus 256 ~l~I~~D---Sgp~Hl--Aaa~g~P~i~lf 280 (319)
T TIGR02193 256 DAVVGVD---TGLTHL--AAALDKPTVTLY 280 (319)
T ss_pred CEEEeCC---ChHHHH--HHHcCCCEEEEE
Confidence 9999765 222222 678999999853
No 162
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=88.23 E-value=7.9 Score=43.26 Aligned_cols=128 Identities=10% Similarity=-0.004 Sum_probs=68.5
Q ss_pred CCEEEEEecCCC--ccCHHHHHHHHHhccCCCeEEEEEeC-C----Ch----hhHHHHHHHHhhcCCcEEEEcCCChHHH
Q 006091 468 CPLIGFIGRLDY--QKGIDLIRLAAPEILADDIQFVMLGS-G----DP----QFESWMRDTEATYKDKYRGWVGFNVPIS 536 (662)
Q Consensus 468 ~~~Il~vGrl~~--~Kg~d~Ll~A~~~l~~~d~~lvivG~-g----~~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 536 (662)
.-+.+..|.+.. .+-+..+..+++.. ...|+++=. + .. ..+.+.+.+. .+..+..|++ +.
T Consensus 265 sVvyvsfGS~~~~~~~q~~ela~gLe~s---~~~FlWv~r~~~~~~~~~~~~lp~~f~er~~--~~g~v~~w~P--Q~-- 335 (451)
T PLN02410 265 SVIFVSLGSLALMEINEVMETASGLDSS---NQQFLWVIRPGSVRGSEWIESLPKEFSKIIS--GRGYIVKWAP--QK-- 335 (451)
T ss_pred cEEEEEccccccCCHHHHHHHHHHHHhc---CCCeEEEEccCcccccchhhcCChhHHHhcc--CCeEEEccCC--HH--
Confidence 345566677653 23344455555444 335555422 1 00 0112222221 2334555553 22
Q ss_pred HHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeC----CcccccccccccccccCCCCc-cceEEE-CCCCHHHHHH
Q 006091 537 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA----TGGLRDTVENFNPFAREGSGE-GTGWSF-LPLSEESMLT 610 (662)
Q Consensus 537 ~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~----~gg~~eii~~~~~~~~~~~~~-~~G~l~-~~~d~~~la~ 610 (662)
.+++...+..+-+. -| -++++||+++|+|+|+-. .......+.+ . +.|+.+ ..-+.+++++
T Consensus 336 -~iL~h~~v~~fvtH-~G-~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~----------~~~~G~~~~~~~~~~~v~~ 402 (451)
T PLN02410 336 -EVLSHPAVGGFWSH-CG-WNSTLESIGEGVPMICKPFSSDQKVNARYLEC----------VWKIGIQVEGDLDRGAVER 402 (451)
T ss_pred -HHhCCCccCeeeec-Cc-hhHHHHHHHcCCCEEeccccccCHHHHHHHHH----------HhCeeEEeCCcccHHHHHH
Confidence 47777666333331 12 248899999999999953 3333344433 2 466665 3356789999
Q ss_pred HHHHHHH
Q 006091 611 ALRFAIR 617 (662)
Q Consensus 611 aI~~~l~ 617 (662)
+|++++.
T Consensus 403 av~~lm~ 409 (451)
T PLN02410 403 AVKRLMV 409 (451)
T ss_pred HHHHHHc
Confidence 9999985
No 163
>PLN02167 UDP-glycosyltransferase family protein
Probab=87.96 E-value=9.1 Score=43.11 Aligned_cols=126 Identities=15% Similarity=0.085 Sum_probs=67.1
Q ss_pred CCEEEEEecCCC--ccCHHHHHHHHHhccCCCeEEEEE-eCCCh--------hhHHHHHHHHhhcCCcEEEEcCCChHHH
Q 006091 468 CPLIGFIGRLDY--QKGIDLIRLAAPEILADDIQFVML-GSGDP--------QFESWMRDTEATYKDKYRGWVGFNVPIS 536 (662)
Q Consensus 468 ~~~Il~vGrl~~--~Kg~d~Ll~A~~~l~~~d~~lviv-G~g~~--------~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 536 (662)
..+.+..|.+.. .+.+..++.+++.+ +.+|+++ +.... ..+.+.+.+. .+..+.+|++ +.
T Consensus 281 svvyvsfGS~~~~~~~~~~ela~~l~~~---~~~flw~~~~~~~~~~~~~~~lp~~~~er~~--~rg~v~~w~P--Q~-- 351 (475)
T PLN02167 281 SVVFLCFGSLGSLPAPQIKEIAQALELV---GCRFLWSIRTNPAEYASPYEPLPEGFMDRVM--GRGLVCGWAP--QV-- 351 (475)
T ss_pred ceEEEeecccccCCHHHHHHHHHHHHhC---CCcEEEEEecCcccccchhhhCChHHHHHhc--cCeeeeccCC--HH--
Confidence 345566777632 33455566666555 5566665 32110 0011222221 1223445552 22
Q ss_pred HHHHHhcC--EEEEcCCCCCCcHHHHHHHHcCCcEEEeC----Ccccccc-cccccccccCCCCccceEEECC-------
Q 006091 537 HRITAGCD--ILLMPSRFEPCGLNQLYAMRYGTIPVVHA----TGGLRDT-VENFNPFAREGSGEGTGWSFLP------- 602 (662)
Q Consensus 537 ~~ll~~aD--i~v~PS~~E~fgl~~lEAma~G~PvVas~----~gg~~ei-i~~~~~~~~~~~~~~~G~l~~~------- 602 (662)
.+|+... .||.-. | -++.+||+++|+|+|+-. ..-.... +.. -+.|+.+..
T Consensus 352 -~iL~h~~vg~fvtH~---G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~----------~g~g~~~~~~~~~~~~ 416 (475)
T PLN02167 352 -EILAHKAIGGFVSHC---G-WNSVLESLWFGVPIATWPMYAEQQLNAFTMVKE----------LGLAVELRLDYVSAYG 416 (475)
T ss_pred -HHhcCcccCeEEeeC---C-cccHHHHHHcCCCEEeccccccchhhHHHHHHH----------hCeeEEeecccccccC
Confidence 4776644 454322 2 238899999999999953 2222222 333 355665531
Q ss_pred --CCHHHHHHHHHHHHH
Q 006091 603 --LSEESMLTALRFAIR 617 (662)
Q Consensus 603 --~d~~~la~aI~~~l~ 617 (662)
.+.++++++|++++.
T Consensus 417 ~~~~~~~l~~av~~~m~ 433 (475)
T PLN02167 417 EIVKADEIAGAVRSLMD 433 (475)
T ss_pred CcccHHHHHHHHHHHhc
Confidence 367889999998885
No 164
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=87.89 E-value=35 Score=34.99 Aligned_cols=103 Identities=13% Similarity=0.025 Sum_probs=56.1
Q ss_pred CCCCEEEEEecCCCccCH--HH---HHHHHHhccC-CCeEEEEEeCCChhhHHHHHHHHhhcC-CcEEEEcC----CChH
Q 006091 466 PDCPLIGFIGRLDYQKGI--DL---IRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWVG----FNVP 534 (662)
Q Consensus 466 ~~~~~Il~vGrl~~~Kg~--d~---Ll~A~~~l~~-~d~~lvivG~g~~~~~~~~~~l~~~~~-~~~~~~~~----~~~~ 534 (662)
+...+-++||.-.+.-.+ |. +..++-+..+ +...|++--+.. ..+.....+....+ .-...|-+ +++
T Consensus 160 ~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRR-Tp~~~~s~l~~~l~s~~~i~w~~~d~g~NP- 237 (329)
T COG3660 160 PRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRR-TPDTVKSILKNNLNSSPGIVWNNEDTGYNP- 237 (329)
T ss_pred CCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecC-CcHHHHHHHHhccccCceeEeCCCCCCCCc-
Confidence 355677888865554333 22 3333322222 477788876642 11222233332222 22333332 232
Q ss_pred HHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCC
Q 006091 535 ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT 574 (662)
Q Consensus 535 ~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~ 574 (662)
-.++|+.||.++.+.-. =.-.-||.+.|+||-+-..
T Consensus 238 -Y~~~La~Adyii~TaDS---inM~sEAasTgkPv~~~~~ 273 (329)
T COG3660 238 -YIDMLAAADYIISTADS---INMCSEAASTGKPVFILEP 273 (329)
T ss_pred -hHHHHhhcceEEEecch---hhhhHHHhccCCCeEEEec
Confidence 23799999999977532 2345799999999987643
No 165
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=87.85 E-value=22 Score=38.13 Aligned_cols=101 Identities=9% Similarity=0.007 Sum_probs=62.1
Q ss_pred CCCEEEEEecCCCccCH--HHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhc-CCcEEEEcCC-ChHHHHHHHHh
Q 006091 467 DCPLIGFIGRLDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATY-KDKYRGWVGF-NVPISHRITAG 542 (662)
Q Consensus 467 ~~~~Il~vGrl~~~Kg~--d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~-~~~~~~~~~~-~~~~~~~ll~~ 542 (662)
+..+++..|.-.+.|.+ +...+.++.|.+.+.+++++|+..+......+.+.... ...+....|. +-.++..+++.
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~ 262 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALIDH 262 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHh
Confidence 34566777766677764 56777777776668899999764322222233343321 1122323332 34556789999
Q ss_pred cCEEEEcCCCCCCcHHHHHHHHcCCcEEEe
Q 006091 543 CDILLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (662)
Q Consensus 543 aDi~v~PS~~E~fgl~~lEAma~G~PvVas 572 (662)
||++|..-. |..=+ |.|.|+|+|+-
T Consensus 263 a~l~v~nDS----Gp~Hl-AaA~g~P~v~l 287 (352)
T PRK10422 263 AQLFIGVDS----APAHI-AAAVNTPLICL 287 (352)
T ss_pred CCEEEecCC----HHHHH-HHHcCCCEEEE
Confidence 999996652 22223 78999999984
No 166
>PLN02207 UDP-glycosyltransferase
Probab=87.68 E-value=11 Score=42.29 Aligned_cols=128 Identities=13% Similarity=0.091 Sum_probs=68.7
Q ss_pred CCEEEEEecCCC--ccCHHHHHHHHHhccCCCeEEEEEeCCChh-----h-HHHHHHHHhhcCCcEEEEcCCChHHHHHH
Q 006091 468 CPLIGFIGRLDY--QKGIDLIRLAAPEILADDIQFVMLGSGDPQ-----F-ESWMRDTEATYKDKYRGWVGFNVPISHRI 539 (662)
Q Consensus 468 ~~~Il~vGrl~~--~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~-----~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 539 (662)
..+.+..|.... .+-+..+..+++.+ +.+|+++=..+.. . +.+.+.. ..+..+.+|.+ +. ++
T Consensus 276 sVVyvSfGS~~~~~~~q~~ela~~l~~~---~~~flW~~r~~~~~~~~~lp~~f~er~--~~~g~i~~W~P--Q~---~I 345 (468)
T PLN02207 276 SVVFLCFGSMGRLRGPLVKEIAHGLELC---QYRFLWSLRTEEVTNDDLLPEGFLDRV--SGRGMICGWSP--QV---EI 345 (468)
T ss_pred cEEEEEeccCcCCCHHHHHHHHHHHHHC---CCcEEEEEeCCCccccccCCHHHHhhc--CCCeEEEEeCC--HH---HH
Confidence 345566676542 33455666666655 4466664322110 0 1222222 22345566663 22 46
Q ss_pred HHhcCEEEEcCCCCCCc-HHHHHHHHcCCcEEEeC----CcccccccccccccccCCCCccceEEE---------CCCCH
Q 006091 540 TAGCDILLMPSRFEPCG-LNQLYAMRYGTIPVVHA----TGGLRDTVENFNPFAREGSGEGTGWSF---------LPLSE 605 (662)
Q Consensus 540 l~~aDi~v~PS~~E~fg-l~~lEAma~G~PvVas~----~gg~~eii~~~~~~~~~~~~~~~G~l~---------~~~d~ 605 (662)
++...+..+-+ .+| ++++||+.+|+|+|+-. .-.....+.+ .-+.|+-+ ..-+.
T Consensus 346 L~H~~vg~FvT---H~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~---------~~gvGv~~~~~~~~~~~~~v~~ 413 (468)
T PLN02207 346 LAHKAVGGFVS---HCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVK---------ELKLAVELKLDYRVHSDEIVNA 413 (468)
T ss_pred hcccccceeee---cCccccHHHHHHcCCCEEecCccccchhhHHHHHH---------HhCceEEEecccccccCCcccH
Confidence 77666644333 222 37899999999999953 3333333222 02345432 12367
Q ss_pred HHHHHHHHHHHH
Q 006091 606 ESMLTALRFAIR 617 (662)
Q Consensus 606 ~~la~aI~~~l~ 617 (662)
+++.++|++++.
T Consensus 414 e~i~~av~~vm~ 425 (468)
T PLN02207 414 NEIETAIRCVMN 425 (468)
T ss_pred HHHHHHHHHHHh
Confidence 899999999985
No 167
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=87.54 E-value=4.8 Score=40.60 Aligned_cols=101 Identities=15% Similarity=0.055 Sum_probs=59.9
Q ss_pred CCCEEEEEecCCCccCH--HHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCC-ChHHHHHHHHhc
Q 006091 467 DCPLIGFIGRLDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGC 543 (662)
Q Consensus 467 ~~~~Il~vGrl~~~Kg~--d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~ll~~a 543 (662)
+..+++..|.-.+.|.+ +...+.+..+.+..++++++|.......+....+.......+....+- +-.++..++..|
T Consensus 105 ~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali~~a 184 (247)
T PF01075_consen 105 KPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALISRA 184 (247)
T ss_dssp SSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHHHTS
T ss_pred CCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHHhcC
Confidence 34566677776688875 448888888877678899999875323444445554433334445443 345566899999
Q ss_pred CEEEEcCCCCCCcHHHHHHHHcCCcEEEe
Q 006091 544 DILLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (662)
Q Consensus 544 Di~v~PS~~E~fgl~~lEAma~G~PvVas 572 (662)
|++|.+-. |..=+ |.|.|+|+|+-
T Consensus 185 ~~~I~~Dt----g~~Hl-A~a~~~p~v~l 208 (247)
T PF01075_consen 185 DLVIGNDT----GPMHL-AAALGTPTVAL 208 (247)
T ss_dssp SEEEEESS----HHHHH-HHHTT--EEEE
T ss_pred CEEEecCC----hHHHH-HHHHhCCEEEE
Confidence 99997752 22333 78999999995
No 168
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=87.50 E-value=18 Score=37.81 Aligned_cols=98 Identities=13% Similarity=-0.031 Sum_probs=59.7
Q ss_pred CCEEEEEecCCC---ccCHHHHHHHHHhccCC-CeEEEEEeCCChhhHHHHHHHHhhcC--CcEEEEcCCChHHHHHHHH
Q 006091 468 CPLIGFIGRLDY---QKGIDLIRLAAPEILAD-DIQFVMLGSGDPQFESWMRDTEATYK--DKYRGWVGFNVPISHRITA 541 (662)
Q Consensus 468 ~~~Il~vGrl~~---~Kg~d~Ll~A~~~l~~~-d~~lvivG~g~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~ll~ 541 (662)
++.|++.-|-.+ .+.++.+.+++..+.+. +.+++++.-.........+.+..... ..+. ...+.++...+++
T Consensus 172 ~~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~--~~~~~~e~~~~i~ 249 (298)
T TIGR03609 172 EPVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQPQDLPLARALRDQLLGPAEVL--SPLDPEELLGLFA 249 (298)
T ss_pred CCeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcchhHHHHHHHHHhcCCCcEEE--ecCCHHHHHHHHh
Confidence 455655544321 22356777778777554 77776665432223344444544432 2332 2235555668999
Q ss_pred hcCEEEEcCCCCCCcHHHHHHHHcCCcEEEe
Q 006091 542 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (662)
Q Consensus 542 ~aDi~v~PS~~E~fgl~~lEAma~G~PvVas 572 (662)
+||+++-...+ .++=|+.+|+|+|+-
T Consensus 250 ~~~~vI~~RlH-----~~I~A~~~gvP~i~i 275 (298)
T TIGR03609 250 SARLVIGMRLH-----ALILAAAAGVPFVAL 275 (298)
T ss_pred hCCEEEEechH-----HHHHHHHcCCCEEEe
Confidence 99988877766 667799999999975
No 169
>PLN00164 glucosyltransferase; Provisional
Probab=87.02 E-value=10 Score=42.69 Aligned_cols=69 Identities=10% Similarity=-0.063 Sum_probs=43.9
Q ss_pred HHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEe----CCcccccccccccccccCCCCccceEEECC-------CCHH
Q 006091 538 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH----ATGGLRDTVENFNPFAREGSGEGTGWSFLP-------LSEE 606 (662)
Q Consensus 538 ~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas----~~gg~~eii~~~~~~~~~~~~~~~G~l~~~-------~d~~ 606 (662)
.+|+.+++..+-+.- | -.+.+||+++|+|+|+- |..-....+.+ .-+.|+.+.. -+.+
T Consensus 351 ~iL~h~~vg~fvtH~-G-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~---------~~gvG~~~~~~~~~~~~~~~e 419 (480)
T PLN00164 351 EILAHAAVGGFVTHC-G-WNSVLESLWHGVPMAPWPLYAEQHLNAFELVA---------DMGVAVAMKVDRKRDNFVEAA 419 (480)
T ss_pred HHhcCcccCeEEeec-c-cchHHHHHHcCCCEEeCCccccchhHHHHHHH---------HhCeEEEeccccccCCcCcHH
Confidence 478887764443321 2 34899999999999994 33333333322 0356766531 2578
Q ss_pred HHHHHHHHHHH
Q 006091 607 SMLTALRFAIR 617 (662)
Q Consensus 607 ~la~aI~~~l~ 617 (662)
+++++|++++.
T Consensus 420 ~l~~av~~vm~ 430 (480)
T PLN00164 420 ELERAVRSLMG 430 (480)
T ss_pred HHHHHHHHHhc
Confidence 99999999885
No 170
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=85.99 E-value=2.5 Score=35.56 Aligned_cols=35 Identities=14% Similarity=0.166 Sum_probs=24.5
Q ss_pred CccEEEeCCCCcchHH-HHHHhhcCCCCCCCCCcEEEEecCC
Q 006091 290 EKCIFLVNDWHAGLVP-VLLASKYRPHGVYKDARSILVIHNL 330 (662)
Q Consensus 290 ~pDVVh~h~~~~~l~~-~ll~~~~~~~~~~~gip~v~tiH~~ 330 (662)
+.||||.|...+.+.. .++-++. .|+++|+|-|++
T Consensus 50 ~I~IVHgH~a~S~l~hE~i~hA~~------mGlktVfTDHSL 85 (90)
T PF08288_consen 50 RIDIVHGHQAFSTLCHEAILHART------MGLKTVFTDHSL 85 (90)
T ss_pred CeeEEEeehhhhHHHHHHHHHHHh------CCCcEEeecccc
Confidence 5799999976554332 3333333 699999999986
No 171
>PLN02555 limonoid glucosyltransferase
Probab=85.94 E-value=15 Score=41.32 Aligned_cols=125 Identities=16% Similarity=0.138 Sum_probs=67.1
Q ss_pred CEEEEEecCCC--ccCHHHHHHHHHhccCCCeEEEEE-eC----CCh----hhHHHHHHHHhhcCCcEEEEcCCChHHHH
Q 006091 469 PLIGFIGRLDY--QKGIDLIRLAAPEILADDIQFVML-GS----GDP----QFESWMRDTEATYKDKYRGWVGFNVPISH 537 (662)
Q Consensus 469 ~~Il~vGrl~~--~Kg~d~Ll~A~~~l~~~d~~lviv-G~----g~~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 537 (662)
.+.+..|.+.. .+-+..++.++.. .+.+|+++ .. +.. ..+...+.+ ..+..+..|++ +.
T Consensus 279 VvyvsfGS~~~~~~~q~~ela~~l~~---~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~--~~~g~v~~W~P--Q~--- 348 (480)
T PLN02555 279 VVYISFGTVVYLKQEQIDEIAYGVLN---SGVSFLWVMRPPHKDSGVEPHVLPEEFLEKA--GDKGKIVQWCP--QE--- 348 (480)
T ss_pred eeEEEeccccCCCHHHHHHHHHHHHh---cCCeEEEEEecCcccccchhhcCChhhhhhc--CCceEEEecCC--HH---
Confidence 45566677542 3334445555543 35677765 21 100 011122211 12345556653 22
Q ss_pred HHHH--hcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeC----CcccccccccccccccCCCCc-cceEEEC-------CC
Q 006091 538 RITA--GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA----TGGLRDTVENFNPFAREGSGE-GTGWSFL-------PL 603 (662)
Q Consensus 538 ~ll~--~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~----~gg~~eii~~~~~~~~~~~~~-~~G~l~~-------~~ 603 (662)
.+++ ++.+|+.-. | ..+.+||+.+|+|+|+-. .......+.+ . +.|+-+. .-
T Consensus 349 ~iL~H~~v~~FvtH~---G-~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~----------~~gvGv~l~~~~~~~~~v 414 (480)
T PLN02555 349 KVLAHPSVACFVTHC---G-WNSTMEALSSGVPVVCFPQWGDQVTDAVYLVD----------VFKTGVRLCRGEAENKLI 414 (480)
T ss_pred HHhCCCccCeEEecC---C-cchHHHHHHcCCCEEeCCCccccHHHHHHHHH----------HhCceEEccCCccccCcC
Confidence 3663 455555332 2 358999999999999953 3333344444 2 4565552 12
Q ss_pred CHHHHHHHHHHHHH
Q 006091 604 SEESMLTALRFAIR 617 (662)
Q Consensus 604 d~~~la~aI~~~l~ 617 (662)
+.++++++|++++.
T Consensus 415 ~~~~v~~~v~~vm~ 428 (480)
T PLN02555 415 TREEVAECLLEATV 428 (480)
T ss_pred cHHHHHHHHHHHhc
Confidence 57889999999884
No 172
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=85.91 E-value=0.43 Score=45.31 Aligned_cols=79 Identities=13% Similarity=0.171 Sum_probs=45.4
Q ss_pred HHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcc--------cccccccccccccCCCCccceEEECC--CCH
Q 006091 536 SHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG--------LRDTVENFNPFAREGSGEGTGWSFLP--LSE 605 (662)
Q Consensus 536 ~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg--------~~eii~~~~~~~~~~~~~~~G~l~~~--~d~ 605 (662)
+..+|+.||+++.-. =+.++.|++++|+|.|.-...+ ....+.+ .+.|+.+.. .+.
T Consensus 66 m~~~m~~aDlvIs~a----G~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~----------~g~~~~~~~~~~~~ 131 (167)
T PF04101_consen 66 MAELMAAADLVISHA----GAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAK----------KGAAIMLDESELNP 131 (167)
T ss_dssp HHHHHHHHSEEEECS-----CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHH----------CCCCCCSECCC-SC
T ss_pred HHHHHHHcCEEEeCC----CccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHH----------cCCccccCcccCCH
Confidence 568999999888533 2468999999999998865544 2222322 233433332 335
Q ss_pred HHHHHHHHHHHHHhhhCHHHHHHHHHH
Q 006091 606 ESMLTALRFAIRTYREHKSSWEGLMRR 632 (662)
Q Consensus 606 ~~la~aI~~~l~~~~~~~~~~~~l~~~ 632 (662)
+.|.++|..++. ++....++..+
T Consensus 132 ~~L~~~i~~l~~----~~~~~~~~~~~ 154 (167)
T PF04101_consen 132 EELAEAIEELLS----DPEKLKEMAKA 154 (167)
T ss_dssp CCHHHHHHCHCC----CHH-SHHHCCC
T ss_pred HHHHHHHHHHHc----CcHHHHHHHHH
Confidence 677777777665 66554544443
No 173
>PLN02208 glycosyltransferase family protein
Probab=85.41 E-value=16 Score=40.66 Aligned_cols=68 Identities=13% Similarity=0.030 Sum_probs=44.9
Q ss_pred HHHHhcCEEEEcCCCCCCc-HHHHHHHHcCCcEEEeC----CcccccccccccccccCCCCccceEEECC-----CCHHH
Q 006091 538 RITAGCDILLMPSRFEPCG-LNQLYAMRYGTIPVVHA----TGGLRDTVENFNPFAREGSGEGTGWSFLP-----LSEES 607 (662)
Q Consensus 538 ~ll~~aDi~v~PS~~E~fg-l~~lEAma~G~PvVas~----~gg~~eii~~~~~~~~~~~~~~~G~l~~~-----~d~~~ 607 (662)
++|+...+.++-+ .+| ++++||+++|+|+|+-. .......+.+ .-+.|+.++. -+.++
T Consensus 323 ~iL~H~~v~~Fvt---HcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~---------~~g~gv~~~~~~~~~~~~~~ 390 (442)
T PLN02208 323 LILDHPSIGCFVN---HCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTE---------EFEVSVEVSREKTGWFSKES 390 (442)
T ss_pred HHhcCCccCeEEc---cCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHH---------HhceeEEeccccCCcCcHHH
Confidence 4777777755544 333 48999999999999953 2233333222 1256666643 36789
Q ss_pred HHHHHHHHHH
Q 006091 608 MLTALRFAIR 617 (662)
Q Consensus 608 la~aI~~~l~ 617 (662)
++++|++++.
T Consensus 391 l~~ai~~~m~ 400 (442)
T PLN02208 391 LSNAIKSVMD 400 (442)
T ss_pred HHHHHHHHhc
Confidence 9999999885
No 174
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=84.65 E-value=6.2 Score=44.52 Aligned_cols=131 Identities=17% Similarity=0.124 Sum_probs=71.9
Q ss_pred CCEEEEEecCCC---ccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcC
Q 006091 468 CPLIGFIGRLDY---QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 544 (662)
Q Consensus 468 ~~~Il~vGrl~~---~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aD 544 (662)
..+++..|.+.. .+-.+.++++++.+ +.++++.=++... ..+ ..+..+..|++ +. ++|+...
T Consensus 277 ~vv~vsfGs~~~~~~~~~~~~~~~~~~~~---~~~~iW~~~~~~~-----~~l--~~n~~~~~W~P--Q~---~lL~hp~ 341 (500)
T PF00201_consen 277 GVVYVSFGSIVSSMPEEKLKEIAEAFENL---PQRFIWKYEGEPP-----ENL--PKNVLIVKWLP--QN---DLLAHPR 341 (500)
T ss_dssp EEEEEE-TSSSTT-HHHHHHHHHHHHHCS---TTEEEEEETCSHG-----CHH--HTTEEEESS----HH---HHHTSTT
T ss_pred CEEEEecCcccchhHHHHHHHHHHHHhhC---CCccccccccccc-----ccc--cceEEEecccc--ch---hhhhccc
Confidence 345666687653 11244566666665 3478877665311 111 12334555552 22 5777665
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcEEEeC----CcccccccccccccccCCCCccceEEECC--CCHHHHHHHHHHHHHH
Q 006091 545 ILLMPSRFEPCGLNQLYAMRYGTIPVVHA----TGGLRDTVENFNPFAREGSGEGTGWSFLP--LSEESMLTALRFAIRT 618 (662)
Q Consensus 545 i~v~PS~~E~fgl~~lEAma~G~PvVas~----~gg~~eii~~~~~~~~~~~~~~~G~l~~~--~d~~~la~aI~~~l~~ 618 (662)
+-++-+. +=-.+++||+.+|+|+|+-. .......+++ -+.|..++. -+.+++.++|+++++
T Consensus 342 v~~fitH--gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~----------~G~g~~l~~~~~~~~~l~~ai~~vl~- 408 (500)
T PF00201_consen 342 VKLFITH--GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEE----------KGVGVVLDKNDLTEEELRAAIREVLE- 408 (500)
T ss_dssp EEEEEES----HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHH----------TTSEEEEGGGC-SHHHHHHHHHHHHH-
T ss_pred ceeeeec--cccchhhhhhhccCCccCCCCcccCCccceEEEE----------EeeEEEEEecCCcHHHHHHHHHHHHh-
Confidence 5443331 23458999999999999953 3344455555 466777754 456889999999887
Q ss_pred hhhCHHHHHHH
Q 006091 619 YREHKSSWEGL 629 (662)
Q Consensus 619 ~~~~~~~~~~l 629 (662)
|+...++.
T Consensus 409 ---~~~y~~~a 416 (500)
T PF00201_consen 409 ---NPSYKENA 416 (500)
T ss_dssp ---SHHHHHHH
T ss_pred ---hhHHHHHH
Confidence 66544433
No 175
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=84.62 E-value=13 Score=41.66 Aligned_cols=141 Identities=11% Similarity=0.011 Sum_probs=76.0
Q ss_pred HHHHHhCCCCCCCCCEEEEEecCC--CccCHHHHHHHHHhccCCCeEEEEE-eCCC-------hh-------hHHHHHHH
Q 006091 455 ALQKELGLPIRPDCPLIGFIGRLD--YQKGIDLIRLAAPEILADDIQFVML-GSGD-------PQ-------FESWMRDT 517 (662)
Q Consensus 455 ~~r~~lgl~~~~~~~~Il~vGrl~--~~Kg~d~Ll~A~~~l~~~d~~lviv-G~g~-------~~-------~~~~~~~l 517 (662)
++.+.+.-.. ++.-+.+..|.+. +.+-++.|..++..+. .+|+++ .+.. .. .+.+.+..
T Consensus 250 ~~~~wLd~~~-~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~---~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~ 325 (455)
T PLN02152 250 SYTLWLDSKT-ESSVIYVSFGTMVELSKKQIEELARALIEGK---RPFLWVITDKLNREAKIEGEEETEIEKIAGFRHEL 325 (455)
T ss_pred HHHHHhhCCC-CCceEEEEecccccCCHHHHHHHHHHHHHcC---CCeEEEEecCcccccccccccccccccchhHHHhc
Confidence 3455554220 2344556668765 3556677777777763 355553 3210 00 01111111
Q ss_pred HhhcCCcEEEEcCCChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeC----CcccccccccccccccCCCC
Q 006091 518 EATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA----TGGLRDTVENFNPFAREGSG 593 (662)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~----~gg~~eii~~~~~~~~~~~~ 593 (662)
..+..+.+|++ +. ++|+...+.++-+. +=.++++||+.+|+|+|+-. .......+.+ .
T Consensus 326 --~~~g~v~~W~P--Q~---~iL~h~~vg~fvtH--~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~---------~ 387 (455)
T PLN02152 326 --EEVGMIVSWCS--QI---EVLRHRAVGCFVTH--CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEE---------I 387 (455)
T ss_pred --cCCeEEEeeCC--HH---HHhCCcccceEEee--CCcccHHHHHHcCCCEEeccccccchHHHHHHHH---------H
Confidence 12335556663 22 47888886554442 12348999999999999953 3333333332 0
Q ss_pred ccceEEEC-----CCCHHHHHHHHHHHHH
Q 006091 594 EGTGWSFL-----PLSEESMLTALRFAIR 617 (662)
Q Consensus 594 ~~~G~l~~-----~~d~~~la~aI~~~l~ 617 (662)
-+.|+-+. ..+.++++++|++++.
T Consensus 388 ~~~G~~~~~~~~~~~~~e~l~~av~~vm~ 416 (455)
T PLN02152 388 WKTGVRVRENSEGLVERGEIRRCLEAVME 416 (455)
T ss_pred hCceEEeecCcCCcCcHHHHHHHHHHHHh
Confidence 02455442 2367899999999985
No 176
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=84.52 E-value=14 Score=39.10 Aligned_cols=97 Identities=8% Similarity=0.020 Sum_probs=57.2
Q ss_pred CEEEEEecCCCccCH--HHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcC-CChHHHHHHHHhcCE
Q 006091 469 PLIGFIGRLDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVG-FNVPISHRITAGCDI 545 (662)
Q Consensus 469 ~~Il~vGrl~~~Kg~--d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~ll~~aDi 545 (662)
.+++..|.-.+.|.+ +...+.+..+.+.+.++++.|+++.+ .+..+.+...... ....+ .+-.++..+++.||+
T Consensus 180 ~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~e-~~~~~~i~~~~~~--~~l~g~~sL~elaali~~a~l 256 (322)
T PRK10964 180 YLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEHE-EQRAKRLAEGFPY--VEVLPKLSLEQVARVLAGAKA 256 (322)
T ss_pred eEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHHH-HHHHHHHHccCCc--ceecCCCCHHHHHHHHHhCCE
Confidence 333444543455654 46778887776667888886434322 3334444333221 22222 244556689999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCcEEEeC
Q 006091 546 LLMPSRFEPCGLNQLYAMRYGTIPVVHA 573 (662)
Q Consensus 546 ~v~PS~~E~fgl~~lEAma~G~PvVas~ 573 (662)
+|.... | .+-=|-|+|+|+|+--
T Consensus 257 ~I~nDS----G-p~HlA~A~g~p~valf 279 (322)
T PRK10964 257 VVSVDT----G-LSHLTAALDRPNITLY 279 (322)
T ss_pred EEecCC----c-HHHHHHHhCCCEEEEE
Confidence 997652 2 2223789999999953
No 177
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=83.99 E-value=8.7 Score=39.57 Aligned_cols=101 Identities=9% Similarity=-0.047 Sum_probs=57.8
Q ss_pred CCCCEEEEEecCCCc-------cCHHHHHHHHHhccC--CCeEEEEEeCCC---hhhHHHHHHHHhhcCCcEEEEcCCCh
Q 006091 466 PDCPLIGFIGRLDYQ-------KGIDLIRLAAPEILA--DDIQFVMLGSGD---PQFESWMRDTEATYKDKYRGWVGFNV 533 (662)
Q Consensus 466 ~~~~~Il~vGrl~~~-------Kg~d~Ll~A~~~l~~--~d~~lvivG~g~---~~~~~~~~~l~~~~~~~~~~~~~~~~ 533 (662)
.+++.|++....... .....+++.+..+.+ +++++++==-.. ............ ........ ..
T Consensus 115 ~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~--~~~~~~~~--~~ 190 (269)
T PF05159_consen 115 KNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPN--LPNVVIID--DD 190 (269)
T ss_pred CCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhc--CCCeEEEC--CC
Confidence 466788888776654 233445555554443 367776632210 001122222211 12222222 22
Q ss_pred HHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCc
Q 006091 534 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG 575 (662)
Q Consensus 534 ~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~g 575 (662)
-....++..||.++.-+ +.+.+||+.+|+||++-...
T Consensus 191 ~~~~~Ll~~s~~Vvtin-----StvGlEAll~gkpVi~~G~~ 227 (269)
T PF05159_consen 191 VNLYELLEQSDAVVTIN-----STVGLEALLHGKPVIVFGRA 227 (269)
T ss_pred CCHHHHHHhCCEEEEEC-----CHHHHHHHHcCCceEEecCc
Confidence 23457999999998665 56899999999999997544
No 178
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=83.91 E-value=12 Score=35.48 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=22.9
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhC-CCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR-GHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~-GheV~Vit~~ 194 (662)
|||+++..+ .||..+. ++..|.+. -|+++++|..
T Consensus 1 M~ILlle~y------~ggSHk~---~~~~L~~~~~~~~~lltLP 35 (168)
T PF12038_consen 1 MRILLLEPY------YGGSHKQ---WADGLAAHSEHEWTLLTLP 35 (168)
T ss_pred CeEEEEccc------cccCHHH---HHHHHHHhccCCEEEEEcC
Confidence 899999853 3666654 34444443 4899999864
No 179
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=81.74 E-value=9.1 Score=39.50 Aligned_cols=97 Identities=18% Similarity=0.145 Sum_probs=60.9
Q ss_pred EEEEEecCCCccC--HHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhc-CCcEEEEcCC-ChHHHHHHHHhcCE
Q 006091 470 LIGFIGRLDYQKG--IDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATY-KDKYRGWVGF-NVPISHRITAGCDI 545 (662)
Q Consensus 470 ~Il~vGrl~~~Kg--~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~-~~~~~~~~~~-~~~~~~~ll~~aDi 545 (662)
+++..|.-.+.|. .+.+.+.++.+.+.+++++++|..+ ..+..+.+.... ........+. +-.++..+++.||+
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~--e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~l 201 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPA--ERELAEEIAAALGGPRVVNLAGKTSLRELAALLARADL 201 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechh--hHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCCE
Confidence 4455555555565 4678888888876689999998753 233334443332 1222222322 33456689999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCcEEEeC
Q 006091 546 LLMPSRFEPCGLNQLYAMRYGTIPVVHA 573 (662)
Q Consensus 546 ~v~PS~~E~fgl~~lEAma~G~PvVas~ 573 (662)
++.+.. |..-+ |.+.|+|+|+--
T Consensus 202 ~I~~Ds----g~~Hl-A~a~~~p~i~l~ 224 (279)
T cd03789 202 VVTNDS----GPMHL-AAALGTPTVALF 224 (279)
T ss_pred EEeeCC----HHHHH-HHHcCCCEEEEE
Confidence 997752 44444 579999999954
No 180
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=81.13 E-value=24 Score=39.77 Aligned_cols=68 Identities=10% Similarity=-0.067 Sum_probs=45.1
Q ss_pred HHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeC----Ccccccccc-cccccccCCCCccceEEECC----CCHHHH
Q 006091 538 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA----TGGLRDTVE-NFNPFAREGSGEGTGWSFLP----LSEESM 608 (662)
Q Consensus 538 ~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~----~gg~~eii~-~~~~~~~~~~~~~~G~l~~~----~d~~~l 608 (662)
++++...+..+-+. +=.++++||+.+|+|+|+-. .......+. . -+.|..++. -+.+++
T Consensus 350 ~iL~h~~vg~FitH--~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~----------~g~gv~~~~~~~~~~~~~l 417 (481)
T PLN02992 350 EILAHQAVGGFLTH--CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDE----------LGIAVRSDDPKEVISRSKI 417 (481)
T ss_pred HHhCCcccCeeEec--CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHH----------hCeeEEecCCCCcccHHHH
Confidence 47777776433331 22348999999999999954 333444442 3 356766643 467899
Q ss_pred HHHHHHHHH
Q 006091 609 LTALRFAIR 617 (662)
Q Consensus 609 a~aI~~~l~ 617 (662)
+++|.+++.
T Consensus 418 ~~av~~vm~ 426 (481)
T PLN02992 418 EALVRKVMV 426 (481)
T ss_pred HHHHHHHhc
Confidence 999999885
No 181
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=79.96 E-value=2 Score=42.28 Aligned_cols=39 Identities=28% Similarity=0.341 Sum_probs=29.6
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCC
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 197 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~ 197 (662)
||||+.+.... .+.-+..|+++|.+.||+|.|++|...+
T Consensus 1 M~ILlTNDDGi-------~a~Gi~aL~~~L~~~g~~V~VvAP~~~~ 39 (196)
T PF01975_consen 1 MRILLTNDDGI-------DAPGIRALAKALSALGHDVVVVAPDSEQ 39 (196)
T ss_dssp SEEEEE-SS-T-------TSHHHHHHHHHHTTTSSEEEEEEESSST
T ss_pred CeEEEEcCCCC-------CCHHHHHHHHHHHhcCCeEEEEeCCCCC
Confidence 99998887532 2345788999998889999999998544
No 182
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=78.36 E-value=57 Score=35.35 Aligned_cols=169 Identities=10% Similarity=0.109 Sum_probs=106.7
Q ss_pred EEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCC-----hhhHHHHHHHHh-hcCCcEEEEcCC----C-hHHHHH
Q 006091 470 LIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGD-----PQFESWMRDTEA-TYKDKYRGWVGF----N-VPISHR 538 (662)
Q Consensus 470 ~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~-----~~~~~~~~~l~~-~~~~~~~~~~~~----~-~~~~~~ 538 (662)
.|=|.|+.+..+=.....+.+.+++++++.++|+-... ...-+.+..+.. ..++.++..+.- . .++..+
T Consensus 156 ~iP~ygsyte~dpv~ia~egv~~fKke~fdvIIvDTSGRh~qe~sLfeEM~~v~~ai~Pd~vi~VmDasiGQaae~Qa~a 235 (483)
T KOG0780|consen 156 RVPFYGSYTEADPVKIASEGVDRFKKENFDVIIVDTSGRHKQEASLFEEMKQVSKAIKPDEIIFVMDASIGQAAEAQARA 235 (483)
T ss_pred CCeeEecccccchHHHHHHHHHHHHhcCCcEEEEeCCCchhhhHHHHHHHHHHHhhcCCCeEEEEEeccccHhHHHHHHH
Confidence 34477788888999999999999999999999986531 122222333332 234444433322 1 223334
Q ss_pred HHHhcCE--EEEcCC----CCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHH
Q 006091 539 ITAGCDI--LLMPSR----FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTAL 612 (662)
Q Consensus 539 ll~~aDi--~v~PS~----~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI 612 (662)
+=...|| ++++-. -.+..+++.+ +.++||+--.+|-.-|-++.|++.. -.+-++--+|.+.|.+.+
T Consensus 236 Fk~~vdvg~vIlTKlDGhakGGgAlSaVa--aTksPIiFIGtGEhmdDlE~F~pk~------FvsrlLGmGDi~glvek~ 307 (483)
T KOG0780|consen 236 FKETVDVGAVILTKLDGHAKGGGALSAVA--ATKSPIIFIGTGEHMDDLEPFDPKP------FVSRLLGMGDIEGLVEKV 307 (483)
T ss_pred HHHhhccceEEEEecccCCCCCceeeehh--hhCCCEEEEecCccccccCCCChHH------HHHHHhccccHHHHHHHH
Confidence 4455666 344433 2356667764 5789999988887766666655433 344455568999999999
Q ss_pred HHHHHHhhhCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 006091 613 RFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFE 652 (662)
Q Consensus 613 ~~~l~~~~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy~ 652 (662)
.++..+ +.+++.+ +-.+-+||...+.+++..+..
T Consensus 308 ~ev~~~--d~~el~~----kl~~gkFtlrd~y~Qfq~imk 341 (483)
T KOG0780|consen 308 QEVGKD--DAKELVE----KLKQGKFTLRDFYDQFQNIMK 341 (483)
T ss_pred HHHhhh--hHHHHHH----HHHhCCccHHHHHHHHHHHHh
Confidence 988731 2333333 333568999999999988764
No 183
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=77.88 E-value=32 Score=36.63 Aligned_cols=100 Identities=11% Similarity=0.034 Sum_probs=61.0
Q ss_pred CCEEEEEecCCCccCH--HHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcC-CcEEEEcCC-ChHHHHHHHHhc
Q 006091 468 CPLIGFIGRLDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWVGF-NVPISHRITAGC 543 (662)
Q Consensus 468 ~~~Il~vGrl~~~Kg~--d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~-~~~~~~~~~-~~~~~~~ll~~a 543 (662)
..+++..|.-.+.|.+ +...+.++.+.+.+.+++++|+..+...+..+.+..... ..+....+- +-.++..+++.|
T Consensus 182 ~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a 261 (344)
T TIGR02201 182 NYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALIDHA 261 (344)
T ss_pred CEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHHhC
Confidence 3455666655566654 667777777766678999998653222223344443322 123323332 335566899999
Q ss_pred CEEEEcCCCCCCcHHHHHHHHcCCcEEEe
Q 006091 544 DILLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (662)
Q Consensus 544 Di~v~PS~~E~fgl~~lEAma~G~PvVas 572 (662)
|++|..- + |..=+ |.|.|+|+|+-
T Consensus 262 ~l~Vs~D---S-Gp~Hl-AaA~g~p~v~L 285 (344)
T TIGR02201 262 RLFIGVD---S-VPMHM-AAALGTPLVAL 285 (344)
T ss_pred CEEEecC---C-HHHHH-HHHcCCCEEEE
Confidence 9999764 2 22223 78999999995
No 184
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=77.68 E-value=18 Score=40.94 Aligned_cols=159 Identities=15% Similarity=0.133 Sum_probs=101.0
Q ss_pred CCEEEEEecCCC-ccCHHHHHHHHHhccCCCeEEEEEeCCC--hhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcC
Q 006091 468 CPLIGFIGRLDY-QKGIDLIRLAAPEILADDIQFVMLGSGD--PQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 544 (662)
Q Consensus 468 ~~~Il~vGrl~~-~Kg~d~Ll~A~~~l~~~d~~lvivG~g~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aD 544 (662)
....+..|.-.. .||-+..++++.+.. .++-.|.+... ..... -++..|.+ +..+...++..+.
T Consensus 277 ~~~AlVyGK~~~~w~~k~~~l~~l~~~~--eih~tV~~~~~~~~~~P~---------~V~NHG~l--~~~ef~~lL~~ak 343 (559)
T PF15024_consen 277 KNQALVYGKERYMWKGKEKYLDVLHKYM--EIHGTVYDEPQRPPNVPS---------FVKNHGIL--SGDEFQQLLRKAK 343 (559)
T ss_pred cceeEEEccchhhhcCcHHHHHHHHhhc--EEEEEeccCCCCCcccch---------hhhhcCcC--CHHHHHHHHHhhh
Confidence 344555566544 677788888887653 56666654432 11111 12334555 5566778999999
Q ss_pred EEEEcCC-CCCCcHHHHHHHHcCCcEEEeCCcccc---------------cccccccccccCCCCccceEEECCCCHHHH
Q 006091 545 ILLMPSR-FEPCGLNQLYAMRYGTIPVVHATGGLR---------------DTVENFNPFAREGSGEGTGWSFLPLSEESM 608 (662)
Q Consensus 545 i~v~PS~-~E~fgl~~lEAma~G~PvVas~~gg~~---------------eii~~~~~~~~~~~~~~~G~l~~~~d~~~l 608 (662)
|+|-... +| |-+.+||+|.|+|.|-....... ++-.. .|+.+.-.+.-.-|.|+-.|.+++
T Consensus 344 vfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQ-hPY~e~~iG~PhVytVd~~n~~~v 420 (559)
T PF15024_consen 344 VFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQ-HPYAEEFIGEPHVYTVDINNSTEV 420 (559)
T ss_pred EeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccC-ChHHHhhCCCCeEEEEcCCCHHHH
Confidence 9996654 45 45789999999999987543211 11111 233322234557789999999999
Q ss_pred HHHHHHHHHHhhhCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 006091 609 LTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFE 652 (662)
Q Consensus 609 a~aI~~~l~~~~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy~ 652 (662)
.+||+++++. +- ..-+--+||-+-|.++...+++
T Consensus 421 ~~Avk~il~~----~v------~Py~P~efT~egmLeRv~~~ie 454 (559)
T PF15024_consen 421 EAAVKAILAT----PV------EPYLPYEFTCEGMLERVNALIE 454 (559)
T ss_pred HHHHHHHHhc----CC------CCcCCcccCHHHHHHHHHHHHH
Confidence 9999999873 10 1113467888888888877665
No 185
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=77.51 E-value=7.1 Score=33.56 Aligned_cols=81 Identities=12% Similarity=0.138 Sum_probs=52.2
Q ss_pred EEEEeCCChhhHHHHHHHHhhcCCcEEEE---cCCChHH--HHHHHHhcCEEEEcCCC---CCCcHHHHHHHHcCCcEEE
Q 006091 500 FVMLGSGDPQFESWMRDTEATYKDKYRGW---VGFNVPI--SHRITAGCDILLMPSRF---EPCGLNQLYAMRYGTIPVV 571 (662)
Q Consensus 500 lvivG~g~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~--~~~ll~~aDi~v~PS~~---E~fgl~~lEAma~G~PvVa 571 (662)
++|+|.-+ .+...++...+....++..+ -+..... ++..+..||++|++.-+ ...-.+--+|-..|+|++.
T Consensus 2 vliVGG~~-~~~~~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 2 VLIVGGRE-DRERRYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIY 80 (97)
T ss_pred EEEEcCCc-ccHHHHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEE
Confidence 56777732 23444444445566666656 3333333 66788899999988753 3455566778889999999
Q ss_pred eCCccccccc
Q 006091 572 HATGGLRDTV 581 (662)
Q Consensus 572 s~~gg~~eii 581 (662)
++..|...+.
T Consensus 81 ~~~~~~~~l~ 90 (97)
T PF10087_consen 81 SRSRGVSSLE 90 (97)
T ss_pred ECCCCHHHHH
Confidence 9866665443
No 186
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=76.71 E-value=16 Score=38.92 Aligned_cols=97 Identities=18% Similarity=0.149 Sum_probs=64.2
Q ss_pred CCEEEEEe-cCCCccCH--HHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCC-ChHHHHHHHHhc
Q 006091 468 CPLIGFIG-RLDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGC 543 (662)
Q Consensus 468 ~~~Il~vG-rl~~~Kg~--d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~ll~~a 543 (662)
+.+++..| .-...|.+ +...+.+..+.++..+++++|+. ...+..+.+.......+. ..+- +-.++..+++.|
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~--~e~e~~~~i~~~~~~~~~-l~~k~sL~e~~~li~~a 252 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGP--DEEERAEEIAKGLPNAVI-LAGKTSLEELAALIAGA 252 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecCh--HHHHHHHHHHHhcCCccc-cCCCCCHHHHHHHHhcC
Confidence 34556667 55577775 57888888887777899999987 344455555554443321 2222 334566899999
Q ss_pred CEEEEcCCCCCCcHHHHHHHHcCCcEEEe
Q 006091 544 DILLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (662)
Q Consensus 544 Di~v~PS~~E~fgl~~lEAma~G~PvVas 572 (662)
|+++.+.. |+.=+ |.|.|+|+|+-
T Consensus 253 ~l~I~~DS----g~~Hl-AaA~~~P~I~i 276 (334)
T COG0859 253 DLVIGNDS----GPMHL-AAALGTPTIAL 276 (334)
T ss_pred CEEEccCC----hHHHH-HHHcCCCEEEE
Confidence 99987652 33333 79999999995
No 187
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=76.69 E-value=29 Score=37.12 Aligned_cols=109 Identities=17% Similarity=0.170 Sum_probs=62.9
Q ss_pred HHHHHhCCCCCCCCC-EEEEEec-CCCccCH--HHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcC----CcEE
Q 006091 455 ALQKELGLPIRPDCP-LIGFIGR-LDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYK----DKYR 526 (662)
Q Consensus 455 ~~r~~lgl~~~~~~~-~Il~vGr-l~~~Kg~--d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~----~~~~ 526 (662)
.+.+.+++. ++++ +++..|. ..+.|.+ +.+.+.++.+.+.+++++++|+.. + .+..+.+..... .+..
T Consensus 169 ~~~~~~~~~--~~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~-e-~~~~~~i~~~~~~~~~~~~~ 244 (348)
T PRK10916 169 ETCAAFSLS--SERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAK-D-HEAGNEILAALNTEQQAWCR 244 (348)
T ss_pred HHHHHcCCC--CCCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHH-h-HHHHHHHHHhccccccccee
Confidence 345555543 3444 4455554 3466764 467777777765678999998753 2 223333332221 1123
Q ss_pred EEcCC-ChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEe
Q 006091 527 GWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (662)
Q Consensus 527 ~~~~~-~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas 572 (662)
...+- +-.++..+++.||++|..-. |..=+ |.|.|+|+|+-
T Consensus 245 ~l~g~~sL~el~ali~~a~l~I~nDT----Gp~Hl-AaA~g~P~val 286 (348)
T PRK10916 245 NLAGETQLEQAVILIAACKAIVTNDS----GLMHV-AAALNRPLVAL 286 (348)
T ss_pred eccCCCCHHHHHHHHHhCCEEEecCC----hHHHH-HHHhCCCEEEE
Confidence 33332 33456689999999996652 22222 78999999984
No 188
>PLN02764 glycosyltransferase family protein
Probab=76.17 E-value=54 Score=36.69 Aligned_cols=69 Identities=10% Similarity=-0.112 Sum_probs=43.2
Q ss_pred HHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCC----cccccccccccccccCCCCccceEEEC-----CCCHHHH
Q 006091 538 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT----GGLRDTVENFNPFAREGSGEGTGWSFL-----PLSEESM 608 (662)
Q Consensus 538 ~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~----gg~~eii~~~~~~~~~~~~~~~G~l~~-----~~d~~~l 608 (662)
++++...+.++-+. +=.++++||+.+|+|+|+-.. ......+.+ +-+.|+.+. ..+.+++
T Consensus 329 ~vL~h~~v~~FvtH--~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~---------~~g~gv~~~~~~~~~~~~e~i 397 (453)
T PLN02764 329 LILSHPSVGCFVSH--CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSD---------ELKVSVEVAREETGWFSKESL 397 (453)
T ss_pred HHhcCcccCeEEec--CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHH---------HhceEEEeccccCCccCHHHH
Confidence 47776555333331 223589999999999999643 233334422 135666542 2368899
Q ss_pred HHHHHHHHH
Q 006091 609 LTALRFAIR 617 (662)
Q Consensus 609 a~aI~~~l~ 617 (662)
.+++++++.
T Consensus 398 ~~av~~vm~ 406 (453)
T PLN02764 398 RDAINSVMK 406 (453)
T ss_pred HHHHHHHhc
Confidence 999999986
No 189
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=75.70 E-value=4.6 Score=36.46 Aligned_cols=47 Identities=17% Similarity=0.160 Sum_probs=31.7
Q ss_pred HHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCccccccc
Q 006091 535 ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTV 581 (662)
Q Consensus 535 ~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii 581 (662)
.+.+++..+|+++--|..+..--.+-.|+.+|+|+|...+|.-.+.+
T Consensus 60 ~l~~~~~~~DVvIDfT~p~~~~~~~~~~~~~g~~~ViGTTG~~~~~~ 106 (124)
T PF01113_consen 60 DLEELLEEADVVIDFTNPDAVYDNLEYALKHGVPLVIGTTGFSDEQI 106 (124)
T ss_dssp -HHHHTTH-SEEEEES-HHHHHHHHHHHHHHT-EEEEE-SSSHHHHH
T ss_pred hHHHhcccCCEEEEcCChHHhHHHHHHHHhCCCCEEEECCCCCHHHH
Confidence 35578888999998886665555667788899999998888655443
No 190
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=75.18 E-value=3.9 Score=36.76 Aligned_cols=40 Identities=28% Similarity=0.383 Sum_probs=24.7
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||+|+.. |.....=....+..|+.+..++||+|.++.+.
T Consensus 1 Mki~fvmD---pi~~i~~~kDTT~alm~eAq~RGhev~~~~~~ 40 (119)
T PF02951_consen 1 MKIAFVMD---PIESIKPYKDTTFALMLEAQRRGHEVFYYEPG 40 (119)
T ss_dssp -EEEEEES----GGG--TTT-HHHHHHHHHHHTT-EEEEE-GG
T ss_pred CeEEEEeC---CHHHCCCCCChHHHHHHHHHHCCCEEEEEEcC
Confidence 89999997 32111111234567889999999999999865
No 191
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=70.95 E-value=21 Score=33.90 Aligned_cols=30 Identities=13% Similarity=0.057 Sum_probs=22.6
Q ss_pred HhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEe
Q 006091 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGI 420 (662)
Q Consensus 381 ~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vI 420 (662)
..+|..++.|+..++.+.. .+.++++|.+.
T Consensus 136 ~~~D~y~Vase~~~~~l~~----------~Gi~~~~I~vt 165 (169)
T PF06925_consen 136 PGVDRYFVASEEVKEELIE----------RGIPPERIHVT 165 (169)
T ss_pred CCCCEEEECCHHHHHHHHH----------cCCChhHEEEe
Confidence 4679999999999988763 35567777654
No 192
>PRK00207 sulfur transfer complex subunit TusD; Validated
Probab=69.48 E-value=8.5 Score=35.06 Aligned_cols=38 Identities=21% Similarity=0.223 Sum_probs=30.4
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCc-EEEEe
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHR-VMVVS 192 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~Ghe-V~Vit 192 (662)
|||+++... +|| .+-..+-..++|+++.+.||+ |.|+-
T Consensus 1 m~~~iv~~~-~Py--~~~~~~~al~~A~aa~~~gh~v~~vFf 39 (128)
T PRK00207 1 MRYAIAVTG-PAY--GTQQASSAYQFAQALLAEGHELVSVFF 39 (128)
T ss_pred CEEEEEEcC-CCC--CCHHHHHHHHHHHHHHhCCCCeeEEEE
Confidence 899988874 676 455668889999999999999 47764
No 193
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=68.76 E-value=5.5 Score=45.26 Aligned_cols=38 Identities=32% Similarity=0.330 Sum_probs=29.0
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
-||+.+++.+ .+-=-.++..++++|+++||+|+|+++.
T Consensus 21 ~kIl~~~P~~-----~~SH~~~~~~l~~~La~rGH~VTvi~p~ 58 (507)
T PHA03392 21 ARILAVFPTP-----AYSHHSVFKVYVEALAERGHNVTVIKPT 58 (507)
T ss_pred ccEEEEcCCC-----CCcHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 4587776432 2334668899999999999999999875
No 194
>PLN02534 UDP-glycosyltransferase
Probab=68.27 E-value=1.1e+02 Score=34.66 Aligned_cols=39 Identities=21% Similarity=0.148 Sum_probs=29.1
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecC
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 195 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~ 195 (662)
+++|+++- +| .+ |=-.-+.+||+.|+.+|+.|+++++..
T Consensus 8 ~~Hvv~vP---fp--aq-GHi~P~l~LAk~La~~G~~vT~v~t~~ 46 (491)
T PLN02534 8 QLHFVLIP---LM--AQ-GHMIPMIDMARLLAERGVIVSLVTTPQ 46 (491)
T ss_pred CCEEEEEC---CC--Cc-chHHHHHHHHHHHHhCCCeEEEEECCC
Confidence 36888774 23 23 445567899999999999999998663
No 195
>PLN00414 glycosyltransferase family protein
Probab=68.22 E-value=58 Score=36.36 Aligned_cols=69 Identities=7% Similarity=-0.103 Sum_probs=44.2
Q ss_pred HHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeC----CcccccccccccccccCCCCccceEEECC-----CCHHHH
Q 006091 538 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA----TGGLRDTVENFNPFAREGSGEGTGWSFLP-----LSEESM 608 (662)
Q Consensus 538 ~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~----~gg~~eii~~~~~~~~~~~~~~~G~l~~~-----~d~~~l 608 (662)
++++.+.+..+-+. +=.++++||+++|+|+|+-. .--....+.+ .-+.|+.+.. .+.+++
T Consensus 324 ~vL~h~~v~~fvtH--~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~---------~~g~g~~~~~~~~~~~~~~~i 392 (446)
T PLN00414 324 LILSHPSVGCFVNH--CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTE---------ELEVSVKVQREDSGWFSKESL 392 (446)
T ss_pred HHhcCCccceEEec--CchhHHHHHHHcCCCEEecCcccchHHHHHHHHH---------HhCeEEEeccccCCccCHHHH
Confidence 47877744333221 12358999999999999954 3333444432 1356766632 478899
Q ss_pred HHHHHHHHH
Q 006091 609 LTALRFAIR 617 (662)
Q Consensus 609 a~aI~~~l~ 617 (662)
++++++++.
T Consensus 393 ~~~v~~~m~ 401 (446)
T PLN00414 393 RDTVKSVMD 401 (446)
T ss_pred HHHHHHHhc
Confidence 999999985
No 196
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=67.26 E-value=7.4 Score=35.26 Aligned_cols=28 Identities=36% Similarity=0.373 Sum_probs=21.4
Q ss_pred cCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 167 TGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 167 ~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
++|--.=...|+++|.++||+|.+.++.
T Consensus 8 t~Ghv~P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 8 TRGHVYPFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp SHHHHHHHHHHHHHHHHTT-EEEEEETG
T ss_pred ChhHHHHHHHHHHHHhccCCeEEEeecc
Confidence 3555555678999999999999988765
No 197
>PLN03015 UDP-glucosyl transferase
Probab=65.14 E-value=1.2e+02 Score=34.22 Aligned_cols=68 Identities=15% Similarity=-0.022 Sum_probs=41.1
Q ss_pred HHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCC----ccccccc-ccccccccCCCCccceEEEC------CCCHH
Q 006091 538 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT----GGLRDTV-ENFNPFAREGSGEGTGWSFL------PLSEE 606 (662)
Q Consensus 538 ~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~----gg~~eii-~~~~~~~~~~~~~~~G~l~~------~~d~~ 606 (662)
++++...+..+-+. +=-++.+||+.+|+|+|+-.. .-....+ +. -+.|+-+. .-..+
T Consensus 347 ~vL~h~~vg~fvtH--~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~----------~gvg~~~~~~~~~~~v~~e 414 (470)
T PLN03015 347 EILSHRSIGGFLSH--CGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEE----------IGVAVRTSELPSEKVIGRE 414 (470)
T ss_pred HHhccCccCeEEec--CCchhHHHHHHcCCCEEecccccchHHHHHHHHHH----------hCeeEEecccccCCccCHH
Confidence 46666655443331 113488999999999999542 2222333 22 24555442 23578
Q ss_pred HHHHHHHHHHH
Q 006091 607 SMLTALRFAIR 617 (662)
Q Consensus 607 ~la~aI~~~l~ 617 (662)
+++++|+.++.
T Consensus 415 ~i~~~v~~lm~ 425 (470)
T PLN03015 415 EVASLVRKIVA 425 (470)
T ss_pred HHHHHHHHHHc
Confidence 89999998883
No 198
>PRK10037 cell division protein; Provisional
Probab=64.75 E-value=7.5 Score=39.57 Aligned_cols=36 Identities=25% Similarity=0.469 Sum_probs=28.0
Q ss_pred eeEEEEeecccCccccCcHHH--HHhhHHHHHHhCCCcEEEEee
Q 006091 152 YNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~--~~~~La~~L~~~GheV~Vit~ 193 (662)
|||+-|.+. .||+|+ .+.+||.+|+++|++|.||=.
T Consensus 1 ~~~iav~n~------KGGvGKTT~a~nLA~~La~~G~rVLlID~ 38 (250)
T PRK10037 1 MAILGLQGV------RGGVGTTSITAALAWSLQMLGENVLVIDA 38 (250)
T ss_pred CcEEEEecC------CCCccHHHHHHHHHHHHHhcCCcEEEEeC
Confidence 666555543 588876 568999999999999999943
No 199
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=63.74 E-value=1.2e+02 Score=32.91 Aligned_cols=78 Identities=17% Similarity=0.246 Sum_probs=48.6
Q ss_pred HHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCC-cccccccccccccccCCCCccceEEE--CCCCHHHHHH
Q 006091 534 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT-GGLRDTVENFNPFAREGSGEGTGWSF--LPLSEESMLT 610 (662)
Q Consensus 534 ~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~-gg~~eii~~~~~~~~~~~~~~~G~l~--~~~d~~~la~ 610 (662)
+++..+++++|+.|-.-.+ +++=||+.|+|+|+-.. +-...+.+++ +-.++.. .+.|.+.+..
T Consensus 277 ~~~~~~l~~~dl~Vg~R~H-----saI~al~~g~p~i~i~Y~~K~~~l~~~~---------gl~~~~~~i~~~~~~~l~~ 342 (385)
T COG2327 277 EELGGILAACDLIVGMRLH-----SAIMALAFGVPAIAIAYDPKVRGLMQDL---------GLPGFAIDIDPLDAEILSA 342 (385)
T ss_pred HHHHHHhccCceEEeehhH-----HHHHHHhcCCCeEEEeecHHHHHHHHHc---------CCCcccccCCCCchHHHHH
Confidence 3455688999998866655 66779999999999542 2222334432 2333433 4566777777
Q ss_pred HHHHHHHHhhhCHHHHHH
Q 006091 611 ALRFAIRTYREHKSSWEG 628 (662)
Q Consensus 611 aI~~~l~~~~~~~~~~~~ 628 (662)
...+.+. ..++++++
T Consensus 343 ~~~e~~~---~~~~~~~~ 357 (385)
T COG2327 343 VVLERLT---KLDELRER 357 (385)
T ss_pred HHHHHHh---ccHHHHhh
Confidence 7776665 34444443
No 200
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=62.04 E-value=12 Score=34.73 Aligned_cols=40 Identities=13% Similarity=0.235 Sum_probs=31.6
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||++|+...-+ .|-....+..+++.|.+.|++|.++-..
T Consensus 1 Mkilii~gS~r~---~~~t~~l~~~~~~~l~~~g~e~~~i~l~ 40 (152)
T PF03358_consen 1 MKILIINGSPRK---NSNTRKLAEAVAEQLEEAGAEVEVIDLA 40 (152)
T ss_dssp -EEEEEESSSST---TSHHHHHHHHHHHHHHHTTEEEEEEECT
T ss_pred CEEEEEECcCCC---CCHHHHHHHHHHHHHHHcCCEEEEEecc
Confidence 999999976333 4777778888899999999999999644
No 201
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=61.98 E-value=9.4 Score=38.81 Aligned_cols=36 Identities=28% Similarity=0.587 Sum_probs=27.7
Q ss_pred eeEEEEeecccCccccCcHHH--HHhhHHHHHHhCCCcEEEEee
Q 006091 152 YNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~--~~~~La~~L~~~GheV~Vit~ 193 (662)
||++.|.. + .||+|+ .+-+||.+|++.|..|.+|=.
T Consensus 1 M~~iai~s---~---kGGvG~TTltAnLA~aL~~~G~~VlaID~ 38 (243)
T PF06564_consen 1 MKVIAIVS---P---KGGVGKTTLTANLAWALARLGESVLAIDL 38 (243)
T ss_pred CcEEEEec---C---CCCCCHHHHHHHHHHHHHHCCCcEEEEeC
Confidence 66555554 2 466665 889999999999999999953
No 202
>PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B ....
Probab=60.33 E-value=11 Score=39.76 Aligned_cols=37 Identities=38% Similarity=0.628 Sum_probs=28.5
Q ss_pred eeEEEEeecccCccccCcHHHHHhh--HHHHHHhCCCcEEEEeecC
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGS--LPVALAARGHRVMVVSPRY 195 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~--La~~L~~~GheV~Vit~~~ 195 (662)
|||+|++. .||+|+-+.. +|..++++|+.|.+++...
T Consensus 1 ~r~~~~~G-------KGGVGKTT~aaA~A~~~A~~G~rtLlvS~Dp 39 (305)
T PF02374_consen 1 MRILFFGG-------KGGVGKTTVAAALALALARRGKRTLLVSTDP 39 (305)
T ss_dssp -SEEEEEE-------STTSSHHHHHHHHHHHHHHTTS-EEEEESST
T ss_pred CeEEEEec-------CCCCCcHHHHHHHHHHHhhCCCCeeEeecCC
Confidence 89999987 4888875555 8888899999999998764
No 203
>PLN00016 RNA-binding protein; Provisional
Probab=57.90 E-value=10 Score=41.19 Aligned_cols=42 Identities=19% Similarity=0.259 Sum_probs=31.9
Q ss_pred ccCCceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 147 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 147 ~~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
+...+|||++++.. .||.|-.=..|++.|.++||+|++++..
T Consensus 48 ~~~~~~~VLVt~~~------~GatG~iG~~lv~~L~~~G~~V~~l~R~ 89 (378)
T PLN00016 48 AAVEKKKVLIVNTN------SGGHAFIGFYLAKELVKAGHEVTLFTRG 89 (378)
T ss_pred cccccceEEEEecc------CCCceeEhHHHHHHHHHCCCEEEEEecC
Confidence 33456788877553 4666777788999999999999999754
No 204
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=57.51 E-value=14 Score=38.41 Aligned_cols=67 Identities=15% Similarity=0.171 Sum_probs=46.8
Q ss_pred HHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCc---ccccccccccccccCCCCccceEEECCCCHHHHHHHH
Q 006091 536 SHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG---GLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTAL 612 (662)
Q Consensus 536 ~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~g---g~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI 612 (662)
..+.|+.|.+.++|.-......-++|||++||.+|....+ ...+++ +| ....+.++..+..++.+.|
T Consensus 230 ~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~l-dw---------~~fsv~v~~~~~~~l~~iL 299 (302)
T PF03016_consen 230 YMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVL-DW---------SRFSVRVPEADLPELPEIL 299 (302)
T ss_pred HHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCccccc-CH---------HHEEEEECHHHHHHHHHHH
Confidence 4478999999999887767889999999999977774321 333555 33 4677888765555444333
No 205
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=55.61 E-value=71 Score=31.03 Aligned_cols=39 Identities=15% Similarity=0.159 Sum_probs=25.7
Q ss_pred hHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecC
Q 006091 374 NVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITN 422 (662)
Q Consensus 374 ~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpn 422 (662)
.+.+..+...|.|.+.|+..++.+.. ++.+++++.+..|
T Consensus 141 ~~~r~~l~~f~~i~aqs~~da~r~~~----------lG~~~~~v~v~Gn 179 (186)
T PF04413_consen 141 FLFRPLLSRFDRILAQSEADAERFRK----------LGAPPERVHVTGN 179 (186)
T ss_dssp HHHHHHGGG-SEEEESSHHHHHHHHT----------TT-S--SEEE---
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHH----------cCCCcceEEEeCc
Confidence 36677888999999999998887753 5667778888765
No 206
>PF03401 TctC: Tripartite tricarboxylate transporter family receptor; InterPro: IPR005064 Bordetella pertussis, the causative agent of human whooping cough (pertussis), is an obligate human pathogen with diverse high-affinity transport systems for the assimilation of iron, a biometal that is essential for growth []. Periplasmic binding proteins of a new family, particularly well represented in this organism (and more generally in beta-proteobacteria), have been called Bug receptors []. They adopt a characteristic Venus flytrap fold with two globular domains bisected by a ligand-binding cleft. The family is specific for carboxylated solutes, with a characteristic mode of binding involving two highly conserved beta strand-beta turn-alpha helix motifs originating from each domain. These two motifs form hydrogen bonds with a carboxylate group of the ligand, both directly and via conserved water molecules, and have thus been termed the carboxylate pincers. Domain 1 recognises the ligand and the carboxylate group serves as an initial anchoring point. Domain 2 discriminates between productively and non-productively bound ligands as proper interactions with this domain is needed for the of the closed conformation []. BugE has a glutamate bound ligand. No charged residues are involved in glutamate binding by BugE, unlike what has been described for all glutamate receptors reported so far. The Bug architecture is highly conserved despite limited sequence identity [].; GO: 0030288 outer membrane-bounded periplasmic space; PDB: 2QPQ_C 2DVZ_A 2F5X_A.
Probab=55.22 E-value=1.2e+02 Score=31.47 Aligned_cols=156 Identities=14% Similarity=0.048 Sum_probs=80.2
Q ss_pred CCEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCC--hHHHHHHHH-hcC
Q 006091 468 CPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFN--VPISHRITA-GCD 544 (662)
Q Consensus 468 ~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~ll~-~aD 544 (662)
.+.+++++.=.+.|.++.+++++++=.. .+.+-..|.|.. ..-....+.+....++. +++|. .+.+.+++. ..|
T Consensus 78 ~~~vl~v~~dsp~~t~~eli~~ak~~p~-~~~~g~~g~g~~-~hl~~~~l~~~~G~~~~-~Vpy~G~~~~~~allgG~vd 154 (274)
T PF03401_consen 78 DPNVLVVRADSPYKTLEELIEYAKANPG-KLTFGSSGPGSS-DHLAAALLAKAAGIKFT-HVPYDGGAEALTALLGGHVD 154 (274)
T ss_dssp EEEEEEEETTSS-SSHHHHHHHHHCSCC-C-EEEESSTTSH-HHHHHHHHHHHHT---E-EEE-SSHHHHHHHHHTTSSS
T ss_pred cceEEEEeCCCccccHHHHHHHHHhCCC-CeEEEecCCCch-HHHHHHHHHHHhCCceE-EEEeCCccHHHHHHhCCeee
Confidence 4567888888899999999999987421 355555555531 11122333334344443 34453 233444553 667
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcE-EEe----CCcccccc--cccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 545 ILLMPSRFEPCGLNQLYAMRYGTIP-VVH----ATGGLRDT--VENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 545 i~v~PS~~E~fgl~~lEAma~G~Pv-Vas----~~gg~~ei--i~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
+.+... -.+......|..- |+. +...++++ +.+.. +....-..-.|++++.+.+++..+.|.++++
T Consensus 155 ~~~~~~------~~~~~~~~~G~~k~Lav~~~~r~~~~pdvPT~~E~G-~~d~~~~~~~g~~~p~gtp~~~~~~l~~a~~ 227 (274)
T PF03401_consen 155 AAFGSP------GEALPYVEAGDLKPLAVFSDERSPALPDVPTFKEQG-YPDIVFGSWRGLFAPKGTPDEIVDKLADAIK 227 (274)
T ss_dssp EEEEEH------HHHHHHHHTTSEEEEEECSSS-BTTCTTS-BTTTTT--TTG--EEEEEEEEETTS-HHHHHHHHHHHH
T ss_pred EEeecH------HHHHHHHhCCCceEEEEecCccccccCCCCCHHHhC-ccceeeeeeeeeecCCCCCHHHHHHHHHHHH
Confidence 765321 1334444555422 222 12222221 11100 0000011346888899999999999999998
Q ss_pred HhhhCHHHHHHHHHHH
Q 006091 618 TYREHKSSWEGLMRRG 633 (662)
Q Consensus 618 ~~~~~~~~~~~l~~~~ 633 (662)
...++++..+.+.+.+
T Consensus 228 ~~~~~pe~~~~~~~~g 243 (274)
T PF03401_consen 228 KALEDPEFQEFLEKMG 243 (274)
T ss_dssp HHHT-HHHHHHHHHHT
T ss_pred HHhCCHHHHHHHHHCC
Confidence 8878887766666655
No 207
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=55.08 E-value=16 Score=35.46 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=26.9
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecC
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 195 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~ 195 (662)
|||++|.. +|=+| ..+.++..++||+|+-|+-+.
T Consensus 1 mKIaiIgA-------sG~~G---s~i~~EA~~RGHeVTAivRn~ 34 (211)
T COG2910 1 MKIAIIGA-------SGKAG---SRILKEALKRGHEVTAIVRNA 34 (211)
T ss_pred CeEEEEec-------CchhH---HHHHHHHHhCCCeeEEEEeCh
Confidence 89999985 35455 567788889999999998663
No 208
>CHL00072 chlL photochlorophyllide reductase subunit L
Probab=54.80 E-value=13 Score=38.91 Aligned_cols=35 Identities=26% Similarity=0.548 Sum_probs=28.4
Q ss_pred eeEEEEeecccCccccCcHHH--HHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~--~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||++.. .||+|+ .+.+||.+|+++|+.|.+|-..
T Consensus 1 m~ia~~g--------KGGVGKTTta~nLA~~La~~G~rVLlID~D 37 (290)
T CHL00072 1 MKLAVYG--------KGGIGKSTTSCNISIALARRGKKVLQIGCD 37 (290)
T ss_pred CeEEEEC--------CCCCcHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 7887765 477765 6789999999999999999544
No 209
>CHL00175 minD septum-site determining protein; Validated
Probab=53.26 E-value=24 Score=36.41 Aligned_cols=47 Identities=28% Similarity=0.499 Sum_probs=33.5
Q ss_pred cccccccCCceeEEEEeecccCccccCcHH--HHHhhHHHHHHhCCCcEEEEeec
Q 006091 142 GEDKAQTRVSYNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 142 ~~~~~~~~~~MkIl~vs~~~~P~~~~GG~~--~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.+++.+.+..+||+.|+.. .||+| +.+.+||.+|++.|++|.+|=..
T Consensus 5 ~~~~~~~~~~~~vi~v~s~------KGGvGKTt~a~nLA~~La~~g~~vlliD~D 53 (281)
T CHL00175 5 TEDKEKSATMSRIIVITSG------KGGVGKTTTTANLGMSIARLGYRVALIDAD 53 (281)
T ss_pred chhhhhcCCCceEEEEEcC------CCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3444555556677777653 45555 57899999999999999998543
No 210
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=53.23 E-value=20 Score=36.85 Aligned_cols=41 Identities=22% Similarity=0.290 Sum_probs=29.8
Q ss_pred CCceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCC
Q 006091 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 197 (662)
Q Consensus 149 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~ 197 (662)
.++||||+.+..... +.-...|+++|.+.| +|.|++|...+
T Consensus 3 ~~~M~ILltNDDGi~-------a~Gi~aL~~~l~~~g-~V~VvAP~~~~ 43 (257)
T PRK13932 3 DKKPHILVCNDDGIE-------GEGIHVLAASMKKIG-RVTVVAPAEPH 43 (257)
T ss_pred CCCCEEEEECCCCCC-------CHHHHHHHHHHHhCC-CEEEEcCCCCC
Confidence 356999988876332 223677888998888 89999987533
No 211
>PRK10840 transcriptional regulator RcsB; Provisional
Probab=51.80 E-value=2.2e+02 Score=27.59 Aligned_cols=110 Identities=7% Similarity=0.010 Sum_probs=61.5
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH--hcCEEEEcCCCCC----CcHHHHHHHHc---CC
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRFEP----CGLNQLYAMRY---GT 567 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~--~aDi~v~PS~~E~----fgl~~lEAma~---G~ 567 (662)
+++++++.+.+.....+...+........+.... +.+.....+. ..|++++-....+ .|+.+++.+.. .+
T Consensus 3 ~~~Ilivdd~~~~~~~l~~~L~~~~~~~~v~~~~-~~~~~~~~~~~~~~DlvllD~~l~~~~~~~g~~~~~~l~~~~~~~ 81 (216)
T PRK10840 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFE-DSTALINNLPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSL 81 (216)
T ss_pred ceEEEEECCcHHHHHHHHHHHhcCCCCEEEEEEC-CHHHHHHHHHhCCCCEEEEeCcCCCCCCCCHHHHHHHHHHHCCCC
Confidence 3567777666422223333332222222333332 2222323433 4798888654433 57777777653 45
Q ss_pred cEEE-eCCcccc---cccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 568 IPVV-HATGGLR---DTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 568 PvVa-s~~gg~~---eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
|+|+ +...... +.+.. |..|++..+.+++++.++|..++.
T Consensus 82 ~iIvls~~~~~~~~~~a~~~----------Ga~~yl~K~~~~~~l~~ai~~v~~ 125 (216)
T PRK10840 82 SIIVLTMNNNPAILSAVLDL----------DIEGIVLKQGAPTDLPKALAALQK 125 (216)
T ss_pred cEEEEEecCCHHHHHHHHHC----------CCeEEEECCCCHHHHHHHHHHHHC
Confidence 6666 4333221 22333 788999999999999999988764
No 212
>PRK10360 DNA-binding transcriptional activator UhpA; Provisional
Probab=51.26 E-value=2e+02 Score=27.02 Aligned_cols=66 Identities=12% Similarity=0.224 Sum_probs=46.6
Q ss_pred hcCEEEEcCCC-CCCcHHHHHHHHcCCcEEEe-CCcccc---cccccccccccCCCCccceEEECCCCHHHHHHHHHHHH
Q 006091 542 GCDILLMPSRF-EPCGLNQLYAMRYGTIPVVH-ATGGLR---DTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAI 616 (662)
Q Consensus 542 ~aDi~v~PS~~-E~fgl~~lEAma~G~PvVas-~~gg~~---eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l 616 (662)
..|++++-... +.-|+.+++.+...+|+|+. ...... +.+.. |..+++..|.+.+.+.++|..++
T Consensus 47 ~~dlvi~d~~~~~~~g~~~~~~l~~~~~vi~~s~~~~~~~~~~~~~~----------ga~~~i~kp~~~~~l~~~i~~~~ 116 (196)
T PRK10360 47 GVQVCICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNA----------GARGFLSKRCSPDELIAAVHTVA 116 (196)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHccCCCEEEEECCCCHHHHHHHHHc----------CCcEEEECCCCHHHHHHHHHHHH
Confidence 46888876543 45677888888777888774 332222 22333 67899999999999999998876
Q ss_pred H
Q 006091 617 R 617 (662)
Q Consensus 617 ~ 617 (662)
.
T Consensus 117 ~ 117 (196)
T PRK10360 117 T 117 (196)
T ss_pred c
Confidence 4
No 213
>PRK13236 nitrogenase reductase; Reviewed
Probab=50.66 E-value=20 Score=37.57 Aligned_cols=40 Identities=23% Similarity=0.384 Sum_probs=30.9
Q ss_pred cCCceeEEEEeecccCccccCcHHH--HHhhHHHHHHhCCCcEEEEeec
Q 006091 148 TRVSYNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 148 ~~~~MkIl~vs~~~~P~~~~GG~~~--~~~~La~~L~~~GheV~Vit~~ 194 (662)
+...||++-|.. .||+|+ .+.+||.+|+++|++|.++-..
T Consensus 2 ~~~~~~~~~~~G-------KGGVGKTt~a~NLA~~La~~G~rVLliD~D 43 (296)
T PRK13236 2 TDENIRQIAFYG-------KGGIGKSTTSQNTLAAMAEMGQRILIVGCD 43 (296)
T ss_pred CCcCceEEEEEC-------CCcCCHHHHHHHHHHHHHHCCCcEEEEEcc
Confidence 345578776643 587776 5689999999999999999544
No 214
>PRK13849 putative crown gall tumor protein VirC1; Provisional
Probab=50.56 E-value=21 Score=36.08 Aligned_cols=37 Identities=27% Similarity=0.378 Sum_probs=28.4
Q ss_pred eeEEEEeecccCccccCcHHH--HHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~--~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||..|.+. .||+|+ .+.+||.+|+++|+.|.||-..
T Consensus 1 M~iI~v~n~------KGGvGKTT~a~nLA~~la~~G~~VlliD~D 39 (231)
T PRK13849 1 MKLLTFCSF------KGGAGKTTALMGLCAALASDGKRVALFEAD 39 (231)
T ss_pred CeEEEEECC------CCCccHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 666655542 688876 5678999999999999999554
No 215
>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein. The BchL peptide (ChlL in chloroplast and cyanobacteria) is an ATP-binding iron-sulfur protein of the dark form protochlorophyllide reductase, an enzyme similar to nitrogenase. This subunit resembles the nitrogenase NifH subunit.
Probab=50.43 E-value=17 Score=37.21 Aligned_cols=35 Identities=29% Similarity=0.503 Sum_probs=27.6
Q ss_pred eeEEEEeecccCccccCcHHH--HHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~--~~~~La~~L~~~GheV~Vit~~ 194 (662)
|+|++. . .||+|+ .+.+||.+|+++|++|.||=..
T Consensus 1 ~~i~~~-g-------KGGVGKTT~~~nLA~~La~~g~rVLliD~D 37 (268)
T TIGR01281 1 MILAVY-G-------KGGIGKSTTSSNLSVAFAKLGKRVLQIGCD 37 (268)
T ss_pred CEEEEE-c-------CCcCcHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 677766 3 478875 5689999999999999999543
No 216
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=50.39 E-value=61 Score=31.04 Aligned_cols=28 Identities=25% Similarity=0.203 Sum_probs=20.1
Q ss_pred cCcHHHHHhhHHHHH-Hh-CCCcEEEEeec
Q 006091 167 TGGLGDVCGSLPVAL-AA-RGHRVMVVSPR 194 (662)
Q Consensus 167 ~GG~~~~~~~La~~L-~~-~GheV~Vit~~ 194 (662)
+||=..-+..|...+ .+ ..++..+++..
T Consensus 7 sGGHt~eml~L~~~~~~~~~~~~~~ivt~~ 36 (170)
T PF08660_consen 7 SGGHTAEMLRLLKALDNDRYQPRTYIVTEG 36 (170)
T ss_pred CcHHHHHHHHHHHHhhhhcCCCcEEEEEcC
Confidence 588888888888888 22 35777777654
No 217
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=50.17 E-value=19 Score=35.88 Aligned_cols=32 Identities=31% Similarity=0.560 Sum_probs=25.1
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
|||++| ||.+.+-..++..|.+.||+|.++..
T Consensus 1 MkI~II----------GG~G~mG~ala~~L~~~G~~V~v~~r 32 (219)
T TIGR01915 1 MKIAVL----------GGTGDQGKGLALRLAKAGNKIIIGSR 32 (219)
T ss_pred CEEEEE----------cCCCHHHHHHHHHHHhCCCEEEEEEc
Confidence 777776 55566667899999999999988743
No 218
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=49.23 E-value=2.2e+02 Score=31.61 Aligned_cols=86 Identities=14% Similarity=0.034 Sum_probs=57.6
Q ss_pred CcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH
Q 006091 555 CGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM 634 (662)
Q Consensus 555 fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~~ 634 (662)
.|..+--+.+.|+|+....+|--.+-++.|+|.. -...++--+|+.+|.+.+.+.+. .+..+++.++..
T Consensus 255 ~G~~lsi~~~~~~PI~fi~~Ge~i~dl~~f~p~~------~~~~iLg~gD~~~l~e~~~~~~~-----~~~~~~~~~~~~ 323 (428)
T TIGR00959 255 GGAALSVRSVTGKPIKFIGVGEKIDDLEPFHPER------MASRILGMGDILSLVEKAQEVVD-----EEEAKKLAEKMK 323 (428)
T ss_pred ccHHHHHHHHHCcCEEEEeCCCChhhCccCCHHH------HHHHHhCCCChHHHHHHHHHhhC-----HHHHHHHHHHHH
Confidence 4555555567899999988775445555544322 34445566888888888887663 333455555555
Q ss_pred HhcCCHHHHHHHHHHHH
Q 006091 635 EKDYTWENAAIQYEQVF 651 (662)
Q Consensus 635 ~~~fs~e~~a~~~~~iy 651 (662)
..+|+.+.+.+++.++-
T Consensus 324 ~~~f~l~d~~~q~~~~~ 340 (428)
T TIGR00959 324 KGQFDLEDFLEQLRQIK 340 (428)
T ss_pred hCCCCHHHHHHHHHHHH
Confidence 67899999999988764
No 219
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=48.85 E-value=27 Score=32.97 Aligned_cols=37 Identities=11% Similarity=0.197 Sum_probs=30.7
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
||+|++-.. +.|-....+..+|..|.+.||+|++.-.
T Consensus 1 Mk~LIlYst-----r~GqT~kIA~~iA~~L~e~g~qvdi~dl 37 (175)
T COG4635 1 MKTLILYST-----RDGQTRKIAEYIASHLRESGIQVDIQDL 37 (175)
T ss_pred CceEEEEec-----CCCcHHHHHHHHHHHhhhcCCeeeeeeh
Confidence 788877542 3577888999999999999999999743
No 220
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=48.58 E-value=16 Score=36.20 Aligned_cols=41 Identities=20% Similarity=0.319 Sum_probs=33.7
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCC
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 197 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~ 197 (662)
|..++++. +| ..|-.+++.+|+++|.+.+|+|..++..|..
T Consensus 1 mpLiIlTG--yP---gsGKTtfakeLak~L~~~i~~vi~l~kdy~~ 41 (261)
T COG4088 1 MPLIILTG--YP---GSGKTTFAKELAKELRQEIWRVIHLEKDYLR 41 (261)
T ss_pred CceEEEec--CC---CCCchHHHHHHHHHHHHhhhhccccchhhhh
Confidence 55666764 46 4789999999999999999999999876544
No 221
>PRK09271 flavodoxin; Provisional
Probab=48.00 E-value=30 Score=32.62 Aligned_cols=36 Identities=22% Similarity=0.286 Sum_probs=30.3
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEe
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit 192 (662)
|||+++-.. .+|....++..++..|.+.|++|.+.-
T Consensus 1 mkv~IvY~S-----~tGnTe~~A~~ia~~l~~~g~~v~~~~ 36 (160)
T PRK09271 1 MRILLAYAS-----LSGNTREVAREIEERCEEAGHEVDWVE 36 (160)
T ss_pred CeEEEEEEc-----CCchHHHHHHHHHHHHHhCCCeeEEEe
Confidence 788887653 368899999999999999999998764
No 222
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=47.92 E-value=20 Score=36.60 Aligned_cols=28 Identities=39% Similarity=0.659 Sum_probs=23.0
Q ss_pred cCcHHH--HHhhHHHHHHhCCCcEEEEeec
Q 006091 167 TGGLGD--VCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 167 ~GG~~~--~~~~La~~L~~~GheV~Vit~~ 194 (662)
.||+|+ .+.+||.+|+++|++|.+|=..
T Consensus 9 KGGvGKTT~~~nLA~~La~~G~kVlliD~D 38 (270)
T cd02040 9 KGGIGKSTTTQNLSAALAEMGKKVMIVGCD 38 (270)
T ss_pred CCcCCHHHHHHHHHHHHHhCCCeEEEEEcC
Confidence 366665 6789999999999999999544
No 223
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=46.88 E-value=23 Score=35.56 Aligned_cols=37 Identities=22% Similarity=0.455 Sum_probs=27.6
Q ss_pred eeEEEEeecccCccccCcHHH--HHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~--~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||..|... .||+|+ .+.+||.+|+++|+.|.+|-..
T Consensus 1 m~iI~v~s~------KGGvGKTt~a~nla~~la~~g~~VlliD~D 39 (246)
T TIGR03371 1 MKVIAIVGV------KGGVGKTTLTANLASALKLLGEPVLAIDLD 39 (246)
T ss_pred CcEEEEEeC------CCCccHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 665555542 466655 7789999999999999999654
No 224
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=46.48 E-value=25 Score=38.69 Aligned_cols=38 Identities=32% Similarity=0.415 Sum_probs=29.1
Q ss_pred CceeEEEEeecccCccccCcHHH--HHhhHHHHHHhCCCcEEEEee
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~--~~~~La~~L~~~GheV~Vit~ 193 (662)
.+|+|+.|.+. .||+|+ .+.+||.+|+.+|+.|.||=.
T Consensus 119 ~~~~vIav~n~------KGGvGKTTta~nLA~~LA~~G~rVLlIDl 158 (405)
T PRK13869 119 EHLQVIAVTNF------KGGSGKTTTSAHLAQYLALQGYRVLAVDL 158 (405)
T ss_pred CCceEEEEEcC------CCCCCHHHHHHHHHHHHHhcCCceEEEcC
Confidence 35776666653 577766 678999999999999999843
No 225
>PLN02572 UDP-sulfoquinovose synthase
Probab=46.24 E-value=36 Score=37.90 Aligned_cols=35 Identities=20% Similarity=0.329 Sum_probs=23.9
Q ss_pred cCCceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEe
Q 006091 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (662)
Q Consensus 148 ~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit 192 (662)
..+.|||++... .|++| ..|++.|.++||+|.++.
T Consensus 44 ~~~~k~VLVTGa-------tGfIG---s~Lv~~L~~~G~~V~~~d 78 (442)
T PLN02572 44 SSKKKKVMVIGG-------DGYCG---WATALHLSKRGYEVAIVD 78 (442)
T ss_pred cccCCEEEEECC-------CcHHH---HHHHHHHHHCCCeEEEEe
Confidence 334566654322 35566 568899999999999875
No 226
>PRK06756 flavodoxin; Provisional
Probab=46.06 E-value=34 Score=31.58 Aligned_cols=38 Identities=11% Similarity=0.227 Sum_probs=31.2
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
+|||++|-.. . +|....++..+++.|.+.|++|.++-.
T Consensus 1 mmkv~IiY~S--~---tGnTe~vA~~ia~~l~~~g~~v~~~~~ 38 (148)
T PRK06756 1 MSKLVMIFAS--M---SGNTEEMADHIAGVIRETENEIEVIDI 38 (148)
T ss_pred CceEEEEEEC--C---CchHHHHHHHHHHHHhhcCCeEEEeeh
Confidence 3788888642 3 699999999999999999999988743
No 227
>TIGR03453 partition_RepA plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error.
Probab=45.70 E-value=28 Score=38.03 Aligned_cols=39 Identities=31% Similarity=0.430 Sum_probs=29.9
Q ss_pred CceeEEEEeecccCccccCcHHH--HHhhHHHHHHhCCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~--~~~~La~~L~~~GheV~Vit~~ 194 (662)
.+|+|+.|++. .||+|+ .+.+||.+|+.+|+.|.+|=..
T Consensus 102 ~~~~vI~v~n~------KGGvGKTT~a~nLA~~La~~G~rVLlID~D 142 (387)
T TIGR03453 102 EHLQVIAVTNF------KGGSGKTTTAAHLAQYLALRGYRVLAIDLD 142 (387)
T ss_pred CCceEEEEEcc------CCCcCHHHHHHHHHHHHHhcCCCEEEEecC
Confidence 56777767653 476665 6789999999999999999544
No 228
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=45.33 E-value=23 Score=36.29 Aligned_cols=35 Identities=31% Similarity=0.559 Sum_probs=27.3
Q ss_pred eeEEEEeecccCccccCcHHH--HHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~--~~~~La~~L~~~GheV~Vit~~ 194 (662)
|+|++.. .||+|+ .+.+||.+|+++|+.|.||=..
T Consensus 1 ~~i~v~g--------KGGvGKTT~a~nLA~~la~~G~rvlliD~D 37 (267)
T cd02032 1 MVLAVYG--------KGGIGKSTTSSNLSVALAKRGKKVLQIGCD 37 (267)
T ss_pred CEEEEec--------CCCCCHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 6777663 366665 6789999999999999999544
No 229
>KOG2099 consensus Glycogen phosphorylase [Carbohydrate transport and metabolism]
Probab=45.25 E-value=55 Score=37.01 Aligned_cols=129 Identities=19% Similarity=0.218 Sum_probs=78.9
Q ss_pred HHHHHhCCCCCCCCCEEEEEecCCCccCHHH----HHHHHHhccCC-----CeEEEEEeCCC-hhhH------HHHHHHH
Q 006091 455 ALQKELGLPIRPDCPLIGFIGRLDYQKGIDL----IRLAAPEILAD-----DIQFVMLGSGD-PQFE------SWMRDTE 518 (662)
Q Consensus 455 ~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~----Ll~A~~~l~~~-----d~~lvivG~g~-~~~~------~~~~~l~ 518 (662)
-+.++++..+.++...=+.+-|+..+|+.-+ ++-.+.++++. -.+.+|+|+-. |.|. +++..++
T Consensus 550 ~le~e~~v~inp~smFDiqVKRIHEYKRQllN~l~vi~~y~riK~e~~k~fvprtvm~GGKaapgY~mAK~Iiklit~V~ 629 (843)
T KOG2099|consen 550 YLEKEYGVKINPSSMFDIQVKRIHEYKRQLLNCLHVIYLYNRIKEEPAKAFVPRTVMIGGKAAPGYHMAKLIIKLITAVA 629 (843)
T ss_pred HHHHHhCcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCceEEEEcCccCchhHHHHHHHHHHHHHH
Confidence 4556777766555544456778888776422 23333444432 24677777642 2221 2222222
Q ss_pred hhcC--------CcEEEEcCCChHHHHHHHHhcCEEEEcCC--CCCCcHHHHHHHHcCCcEEEeCCccccccccc
Q 006091 519 ATYK--------DKYRGWVGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRDTVEN 583 (662)
Q Consensus 519 ~~~~--------~~~~~~~~~~~~~~~~ll~~aDi~v~PS~--~E~fgl~~lEAma~G~PvVas~~gg~~eii~~ 583 (662)
...+ .+++..-.++......++.++|+-=.-|. .|+.|..-+.-|..|+..|.|--|..-|+-++
T Consensus 630 dvVN~Dp~vgd~LKViFl~nY~Vs~AE~iIPasdLSe~ISTAGtEASGT~NMKF~lNG~l~IGTlDGANVEm~eE 704 (843)
T KOG2099|consen 630 DVVNNDPEVGDRLKVIFLENYRVSLAEKIIPASDLSEQISTAGTEASGTGNMKFMLNGALTIGTLDGANVEMAEE 704 (843)
T ss_pred HHhcCChhhhheeEEEEecCcccchhhhccchHHHHHHhhhccccccCCCcceEEecCeEEEecccccchHHHHH
Confidence 2111 24554555666666678888888555554 58999999999999999999988887777655
No 230
>PRK10867 signal recognition particle protein; Provisional
Probab=44.84 E-value=3.1e+02 Score=30.48 Aligned_cols=86 Identities=16% Similarity=0.065 Sum_probs=57.8
Q ss_pred CcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH
Q 006091 555 CGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM 634 (662)
Q Consensus 555 fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~~ 634 (662)
.|..+-=+...|+|+....+|--.+-++.|+|.. -...++--+|+.+|.+.+.+.+. .+..+++.++..
T Consensus 256 gG~alsi~~~~~~PI~fig~Ge~v~DLe~f~p~~------~~~~ilgmgD~~~l~e~~~~~~~-----~~~~~~~~~~~~ 324 (433)
T PRK10867 256 GGAALSIRAVTGKPIKFIGTGEKLDDLEPFHPDR------MASRILGMGDVLSLIEKAQEVVD-----EEKAEKLAKKLK 324 (433)
T ss_pred ccHHHHHHHHHCcCEEEEeCCCccccCccCCHHH------HHHHHhCCCChHHHHHHHHHhhC-----HHHHHHHHHHHH
Confidence 3444444577899999987774445555554322 34445566888888888877653 444456666655
Q ss_pred HhcCCHHHHHHHHHHHH
Q 006091 635 EKDYTWENAAIQYEQVF 651 (662)
Q Consensus 635 ~~~fs~e~~a~~~~~iy 651 (662)
..+|+.+.+.+++.++-
T Consensus 325 ~g~f~l~d~~~q~~~~~ 341 (433)
T PRK10867 325 KGKFDLEDFLEQLQQMK 341 (433)
T ss_pred hCCCCHHHHHHHHHHHH
Confidence 67899999999988764
No 231
>PRK02122 glucosamine-6-phosphate deaminase-like protein; Validated
Probab=42.47 E-value=45 Score=39.12 Aligned_cols=40 Identities=18% Similarity=0.156 Sum_probs=29.7
Q ss_pred CCceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 149 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
..++||++|+++ |. -....+.-....|+++||+|+|++..
T Consensus 367 ~~~~rvLv~spH--PD----Devi~~GGTlarl~~~G~~V~vv~~T 406 (652)
T PRK02122 367 PYPKRVIIFSPH--PD----DDVISMGGTFRRLVEQGHDVHVAYQT 406 (652)
T ss_pred cCCceEEEEEeC--CC----chHhhhHHHHHHHHHCCCcEEEEEec
Confidence 346899999975 53 34455555667899999999998755
No 232
>PRK13232 nifH nitrogenase reductase; Reviewed
Probab=41.49 E-value=29 Score=35.78 Aligned_cols=28 Identities=29% Similarity=0.617 Sum_probs=23.3
Q ss_pred cCcHHH--HHhhHHHHHHhCCCcEEEEeec
Q 006091 167 TGGLGD--VCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 167 ~GG~~~--~~~~La~~L~~~GheV~Vit~~ 194 (662)
.||+|+ .+.+||.+|+++|++|.+|=..
T Consensus 9 KGGVGKTT~a~nLA~~La~~G~rVllvD~D 38 (273)
T PRK13232 9 KGGIGKSTTTQNLTAALSTMGNKILLVGCD 38 (273)
T ss_pred CCCCcHHHHHHHHHHHHHhhCCCeEEEecc
Confidence 477776 5689999999999999999443
No 233
>COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=41.31 E-value=40 Score=35.87 Aligned_cols=38 Identities=37% Similarity=0.617 Sum_probs=31.5
Q ss_pred ceeEEEEeecccCccccCcHHH--HHhhHHHHHHhCCCcEEEEeecC
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSPRY 195 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~--~~~~La~~L~~~GheV~Vit~~~ 195 (662)
.|||+|++. .||+|+ .+..+|..|++.|..|.+|+...
T Consensus 1 ~~riv~f~G-------KGGVGKTT~aaA~A~~lA~~g~kvLlvStDP 40 (322)
T COG0003 1 MTRIVFFTG-------KGGVGKTTIAAATAVKLAESGKKVLLVSTDP 40 (322)
T ss_pred CcEEEEEec-------CCcccHHHHHHHHHHHHHHcCCcEEEEEeCC
Confidence 378999986 599999 77778899999998888887653
No 234
>COG0716 FldA Flavodoxins [Energy production and conversion]
Probab=41.24 E-value=36 Score=31.69 Aligned_cols=37 Identities=24% Similarity=0.304 Sum_probs=31.1
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEe
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit 192 (662)
+|||++|... .+|....++..++..|.+.|++|.+..
T Consensus 1 M~ki~Ivy~S-----~tGnTe~vA~~i~~~l~~~~~~~~~~~ 37 (151)
T COG0716 1 MMKILIVYGS-----RTGNTEKVAEIIAEELGADGFEVDIDI 37 (151)
T ss_pred CCeEEEEEEc-----CCCcHHHHHHHHHHHhccCCceEEEee
Confidence 4889988753 379999999999999999999995553
No 235
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=41.21 E-value=1.9e+02 Score=27.52 Aligned_cols=100 Identities=19% Similarity=0.204 Sum_probs=62.3
Q ss_pred ccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcC-CcEEEEc-C-CChHHHHHHH-----HhcCEEEEcCC
Q 006091 480 QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWV-G-FNVPISHRIT-----AGCDILLMPSR 551 (662)
Q Consensus 480 ~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~-~~~~~~~-~-~~~~~~~~ll-----~~aDi~v~PS~ 551 (662)
.-|.|++.+.+....+++.++.++|+.+...+...+.+...++ .++.+.. + +++++..++. +.+|++++-.-
T Consensus 31 v~g~dl~~~l~~~~~~~~~~ifllG~~~~~~~~~~~~l~~~yP~l~ivg~~~g~f~~~~~~~i~~~I~~~~pdiv~vglG 110 (172)
T PF03808_consen 31 VTGSDLFPDLLRRAEQRGKRIFLLGGSEEVLEKAAANLRRRYPGLRIVGYHHGYFDEEEEEAIINRINASGPDIVFVGLG 110 (172)
T ss_pred cCHHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHCCCeEEEEecCCCCChhhHHHHHHHHHHcCCCEEEEECC
Confidence 4588898888888777789999999987777777777877764 4566533 3 2333333343 47888876652
Q ss_pred ---CCCCcHHHHHHHHcCCcEEEeCCcccccccc
Q 006091 552 ---FEPCGLNQLYAMRYGTIPVVHATGGLRDTVE 582 (662)
Q Consensus 552 ---~E~fgl~~lEAma~G~PvVas~~gg~~eii~ 582 (662)
.|-| +.+-....-..|.-.+||.-++..
T Consensus 111 ~PkQE~~---~~~~~~~l~~~v~i~vG~~~d~~a 141 (172)
T PF03808_consen 111 APKQERW---IARHRQRLPAGVIIGVGGAFDFLA 141 (172)
T ss_pred CCHHHHH---HHHHHHHCCCCEEEEECchhhhhc
Confidence 2322 223333333336666676666554
No 236
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=40.89 E-value=43 Score=32.90 Aligned_cols=36 Identities=19% Similarity=0.042 Sum_probs=28.3
Q ss_pred ceeEEEEeecccCccccCcHHHHH--hhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVC--GSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~--~~La~~L~~~GheV~Vit~~ 194 (662)
.+||++-. +||.+.+- .++++.|.+.||+|.|+.+.
T Consensus 5 ~k~IllgV--------TGsiaa~k~a~~lir~L~k~G~~V~vv~T~ 42 (196)
T PRK08305 5 GKRIGFGL--------TGSHCTYDEVMPEIEKLVDEGAEVTPIVSY 42 (196)
T ss_pred CCEEEEEE--------cCHHHHHHHHHHHHHHHHhCcCEEEEEECH
Confidence 35677654 47777764 89999999999999999755
No 237
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=40.80 E-value=2.9e+02 Score=30.67 Aligned_cols=97 Identities=11% Similarity=0.016 Sum_probs=63.1
Q ss_pred CEEEEcCCCC--CCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhh
Q 006091 544 DILLMPSRFE--PCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYRE 621 (662)
Q Consensus 544 Di~v~PS~~E--~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~ 621 (662)
+-++++-..| ..|..+-=+...|+|+..-.+|---+-++.|++.. -...+.--+|..+|.+.+.+.+.
T Consensus 242 ~g~IlTKlD~~argG~aLs~~~~t~~PI~fig~Ge~v~Dle~f~p~~------~~~rilgmgDi~~L~ek~~~~~~---- 311 (429)
T TIGR01425 242 GSVIITKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEIFKTQP------FISKLLGMGDIEGLIDKVQDLKL---- 311 (429)
T ss_pred cEEEEECccCCCCccHHhhhHHHHCCCeEEEcCCCChhhcCcCChHH------HHHHHhcCCCcHHHHHHHHHhhh----
Confidence 4455554443 34555655788899999988775445555544322 23334456888999998888764
Q ss_pred CHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 006091 622 HKSSWEGLMRRGMEKDYTWENAAIQYEQVF 651 (662)
Q Consensus 622 ~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy 651 (662)
.+..+++.++.....|+.+.+.+++.++-
T Consensus 312 -~~~~~~~~~k~~~~~f~l~D~~~q~~~i~ 340 (429)
T TIGR01425 312 -DDNEKALIEKLKEGTFTLRDMYEQFQNLL 340 (429)
T ss_pred -HHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 33345555555567899999999988764
No 238
>COG1192 Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=40.59 E-value=37 Score=34.52 Aligned_cols=37 Identities=30% Similarity=0.556 Sum_probs=27.6
Q ss_pred eeEEEEeecccCccccCcHHH--HHhhHHHHHH-hCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGD--VCGSLPVALA-ARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~--~~~~La~~L~-~~GheV~Vit~~ 194 (662)
|+|+-|... .||+|+ .+.+||.+|+ ..||+|.+|=..
T Consensus 2 ~~iI~v~n~------KGGvGKTT~a~nLa~~La~~~~~kVLliDlD 41 (259)
T COG1192 2 MKIIAVANQ------KGGVGKTTTAVNLAAALAKRGGKKVLLIDLD 41 (259)
T ss_pred CEEEEEEec------CCCccHHHHHHHHHHHHHHhcCCcEEEEeCC
Confidence 666666553 588876 6788999999 556999999543
No 239
>PRK13235 nifH nitrogenase reductase; Reviewed
Probab=40.28 E-value=33 Score=35.33 Aligned_cols=28 Identities=36% Similarity=0.551 Sum_probs=23.6
Q ss_pred cCcHHH--HHhhHHHHHHhCCCcEEEEeec
Q 006091 167 TGGLGD--VCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 167 ~GG~~~--~~~~La~~L~~~GheV~Vit~~ 194 (662)
.||+|+ .+.+||.+|+++|++|.||=..
T Consensus 9 KGGVGKTT~~~nLA~~La~~G~rVLlID~D 38 (274)
T PRK13235 9 KGGIGKSTTTQNTVAGLAEMGKKVMVVGCD 38 (274)
T ss_pred CCCccHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 488876 5789999999999999999544
No 240
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=39.83 E-value=39 Score=30.54 Aligned_cols=36 Identities=19% Similarity=0.060 Sum_probs=25.5
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||++...- ++....+.++.+.|.+.|++|.|+...
T Consensus 1 k~i~l~vtG-------s~~~~~~~~~l~~L~~~g~~v~vv~S~ 36 (129)
T PF02441_consen 1 KRILLGVTG-------SIAAYKAPDLLRRLKRAGWEVRVVLSP 36 (129)
T ss_dssp -EEEEEE-S-------SGGGGGHHHHHHHHHTTTSEEEEEESH
T ss_pred CEEEEEEEC-------HHHHHHHHHHHHHHhhCCCEEEEEECC
Confidence 678777652 222334789999999999999999654
No 241
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=39.56 E-value=1.6e+02 Score=28.38 Aligned_cols=98 Identities=16% Similarity=0.131 Sum_probs=59.9
Q ss_pred CHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcC-CcEEEEcCC-ChHHHHHHH-----HhcCEEEEcC---C
Q 006091 482 GIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWVGF-NVPISHRIT-----AGCDILLMPS---R 551 (662)
Q Consensus 482 g~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~-~~~~~~~~~-~~~~~~~ll-----~~aDi~v~PS---~ 551 (662)
|.|++.+.++...+.+.++.++|+.+...+...+.+...++ .++.+..++ ++++..++. +.+|++++-- .
T Consensus 33 G~dl~~~l~~~~~~~~~~vfllG~~~~v~~~~~~~l~~~yP~l~i~g~~g~f~~~~~~~i~~~I~~s~~dil~VglG~Pk 112 (177)
T TIGR00696 33 GPDLMEELCQRAGKEKLPIFLYGGKPDVLQQLKVKLIKEYPKLKIVGAFGPLEPEERKAALAKIARSGAGIVFVGLGCPK 112 (177)
T ss_pred hHHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHHcCCCEEEEEcCCcH
Confidence 88999899888766789999999997777777788877764 456666554 332222222 4788887654 2
Q ss_pred CCCCcHHHHHHHHcCCcEEEeCCcccccccc
Q 006091 552 FEPCGLNQLYAMRYGTIPVVHATGGLRDTVE 582 (662)
Q Consensus 552 ~E~fgl~~lEAma~G~PvVas~~gg~~eii~ 582 (662)
.|-|-.... .....+ |.-.+||.-++..
T Consensus 113 QE~~~~~~~--~~~~~~-v~~gvGg~fd~~a 140 (177)
T TIGR00696 113 QEIWMRNHR--HLKPDA-VMIGVGGSFDVFS 140 (177)
T ss_pred hHHHHHHhH--HhCCCc-EEEEeceeeeecc
Confidence 343322211 122333 3344777655553
No 242
>PRK09739 hypothetical protein; Provisional
Probab=39.26 E-value=53 Score=32.09 Aligned_cols=41 Identities=24% Similarity=0.246 Sum_probs=30.7
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
+|||++|..+ |.. .|-....+..+.+++.+.||+|.++-..
T Consensus 3 mmkiliI~~s--p~~-~s~s~~l~~~~~~~~~~~g~~v~~~dL~ 43 (199)
T PRK09739 3 SMRIYLVWAH--PRH-DSLTAKVAEAIHQRAQERGHQVEELDLY 43 (199)
T ss_pred CceEEEEEcC--CCC-CCcHHHHHHHHHHHHHHCCCEEEEEEhh
Confidence 6899999976 432 2335667778888899999999988543
No 243
>PRK00771 signal recognition particle protein Srp54; Provisional
Probab=39.23 E-value=3.3e+02 Score=30.32 Aligned_cols=97 Identities=18% Similarity=0.067 Sum_probs=63.4
Q ss_pred CEEEEcCCCC--CCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhh
Q 006091 544 DILLMPSRFE--PCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYRE 621 (662)
Q Consensus 544 Di~v~PS~~E--~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~ 621 (662)
+-+|++-..| ..|..+-=+...|+|+..-.+|---|-++.|++.. -...++--+|+.+|.+.+.+.+.
T Consensus 235 ~gvIlTKlD~~a~~G~~ls~~~~~~~Pi~fig~Ge~v~Dle~f~~~~------~~~~ilgmgd~~~l~e~~~~~~~---- 304 (437)
T PRK00771 235 GGIIITKLDGTAKGGGALSAVAETGAPIKFIGTGEKIDDLERFDPDR------FISRLLGMGDLESLLEKVEEALD---- 304 (437)
T ss_pred CEEEEecccCCCcccHHHHHHHHHCcCEEEEecCCCcccCCcCCHHH------HHHHHhCCCChHHHHHHHHHhhh----
Confidence 3445544443 34656655677899998887775546666554432 23445566888888888887653
Q ss_pred CHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 006091 622 HKSSWEGLMRRGMEKDYTWENAAIQYEQVF 651 (662)
Q Consensus 622 ~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy 651 (662)
.+..+++.++.....|+.+...+++.++-
T Consensus 305 -~~~~~~~~~~~~~~~f~l~d~~~q~~~~~ 333 (437)
T PRK00771 305 -EEEEEKDVEKMMKGKFTLKDMYKQLEAMN 333 (437)
T ss_pred -HHHHHHHHHHHHcCCcCHHHHHHHHHHHH
Confidence 33445555555567899999999888764
No 244
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=39.12 E-value=37 Score=35.80 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=26.7
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
..|||++|.. |++|. .+|..|++.||+|++++..
T Consensus 4 ~~m~I~IiG~--------GaiG~---~lA~~L~~~g~~V~~~~r~ 37 (313)
T PRK06249 4 ETPRIGIIGT--------GAIGG---FYGAMLARAGFDVHFLLRS 37 (313)
T ss_pred cCcEEEEECC--------CHHHH---HHHHHHHHCCCeEEEEEeC
Confidence 3599999862 77775 4678899999999999754
No 245
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=39.00 E-value=37 Score=34.61 Aligned_cols=38 Identities=24% Similarity=0.250 Sum_probs=28.5
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCC
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 197 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~ 197 (662)
||||+.+.... .+.....|+++|.+.| +|+|++|...+
T Consensus 1 M~ILltNDDGi-------~a~Gi~aL~~~l~~~g-~V~VvAP~~~~ 38 (244)
T TIGR00087 1 MKILLTNDDGI-------HSPGIRALYQALKELG-EVTVVAPARQR 38 (244)
T ss_pred CeEEEECCCCC-------CCHhHHHHHHHHHhCC-CEEEEeCCCCc
Confidence 89998876521 2335788899999998 99999987533
No 246
>PHA02519 plasmid partition protein SopA; Reviewed
Probab=38.79 E-value=39 Score=36.95 Aligned_cols=38 Identities=24% Similarity=0.317 Sum_probs=28.8
Q ss_pred CceeEEEEeecccCccccCcHHH--HHhhHHHHHHhCCCcEEEEee
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~--~~~~La~~L~~~GheV~Vit~ 193 (662)
.+++|+.|.+. .||+|+ .+.+||.+|+.+|+.|.||=.
T Consensus 104 ~~~~vIav~n~------KGGVGKTTta~nLA~~LA~~G~rVLlIDl 143 (387)
T PHA02519 104 KNPVVLAVMSH------KGGVYKTSSAVHTAQWLALQGHRVLLIEG 143 (387)
T ss_pred CCceEEEEecC------CCCCcHHHHHHHHHHHHHhCCCcEEEEeC
Confidence 45666656542 577776 678999999999999999953
No 247
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=38.61 E-value=34 Score=34.37 Aligned_cols=26 Identities=31% Similarity=0.539 Sum_probs=22.4
Q ss_pred cHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 169 GLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 169 G~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|.+++-..+|+.|.+.||+|.+|-..
T Consensus 7 G~G~vG~~va~~L~~~g~~Vv~Id~d 32 (225)
T COG0569 7 GAGRVGRSVARELSEEGHNVVLIDRD 32 (225)
T ss_pred CCcHHHHHHHHHHHhCCCceEEEEcC
Confidence 56788899999999999999999533
No 248
>TIGR01380 glut_syn glutathione synthetase, prokaryotic. This model was built using glutathione synthetases found in Gram-negative bacteria. This gene does not appear to be present in genomes of Gram-positive bacteria. Glutathione synthetase has an ATP-binding domain in the COOH terminus and catalyzes the second step in the glutathione biosynthesis pathway: ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione. Glutathione is a tripeptide that functions as a reductant in many cellular reactions.
Probab=38.01 E-value=29 Score=36.68 Aligned_cols=40 Identities=20% Similarity=0.256 Sum_probs=29.1
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||+|+.. |.....--...+..|..+.+++||+|.++.+.
T Consensus 1 m~~~~~~~---~~~~~~~~~~st~~L~~aa~~rG~~v~~~~~~ 40 (312)
T TIGR01380 1 LKVAFQMD---PIESINIGKDTTFALMEEAQKRGHELFFYEPG 40 (312)
T ss_pred CeEEEEeC---CHHHCCCCcChHHHHHHHHHHcCCEEEEEehh
Confidence 89999986 22111112335678999999999999999876
No 249
>TIGR00639 PurN phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent. In phylogenetic analyses, the member from Saccharomyces cerevisiae shows a long branch length but membership in the family, while the formyltetrahydrofolate deformylases form a closely related outgroup.
Probab=38.01 E-value=1.4e+02 Score=29.09 Aligned_cols=34 Identities=21% Similarity=0.167 Sum_probs=24.0
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCC--cEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGH--RVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~Gh--eV~Vit~~ 194 (662)
|||+++. +|.+.....+..++.+.++ +|.+|.+.
T Consensus 1 ~riail~---------sg~gs~~~~ll~~~~~~~l~~~I~~vi~~ 36 (190)
T TIGR00639 1 KRIVVLI---------SGNGSNLQAIIDACKEGKIPASVVLVISN 36 (190)
T ss_pred CeEEEEE---------cCCChhHHHHHHHHHcCCCCceEEEEEEC
Confidence 6888887 3456677888888888776 55554444
No 250
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=37.69 E-value=2.7e+02 Score=28.38 Aligned_cols=98 Identities=13% Similarity=0.148 Sum_probs=60.0
Q ss_pred CHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEE-cCC-ChHHHHHHH-----HhcCEEEEcC---C
Q 006091 482 GIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGW-VGF-NVPISHRIT-----AGCDILLMPS---R 551 (662)
Q Consensus 482 g~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~-~~~-~~~~~~~ll-----~~aDi~v~PS---~ 551 (662)
|.|++.+.++...+.+.++.++|+.+...+...+.++..++.++.+. -|+ +.++..++. +.+|++++-- .
T Consensus 90 G~dl~~~ll~~~~~~~~~v~llG~~~~v~~~a~~~l~~~y~l~i~g~~~Gyf~~~e~~~i~~~I~~s~~dil~VglG~Pk 169 (243)
T PRK03692 90 GADLWEALMARAGKEGTPVFLVGGKPEVLAQTEAKLRTQWNVNIVGSQDGYFTPEQRQALFERIHASGAKIVTVAMGSPK 169 (243)
T ss_pred hHHHHHHHHHHHHhcCCeEEEECCCHHHHHHHHHHHHHHhCCEEEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEECCCcH
Confidence 88999998887766678999999987667777777777666666653 344 322222222 4788888654 2
Q ss_pred CCCCcHHHHHHHHcCCcEEEeCCcccccccc
Q 006091 552 FEPCGLNQLYAMRYGTIPVVHATGGLRDTVE 582 (662)
Q Consensus 552 ~E~fgl~~lEAma~G~PvVas~~gg~~eii~ 582 (662)
.|-|-....+. .+.++ .-.+||.-+++.
T Consensus 170 QE~~~~~~~~~--~~~~v-~~gvGg~fD~~a 197 (243)
T PRK03692 170 QEIFMRDCRLV--YPDAL-YMGVGGTYDVFT 197 (243)
T ss_pred HHHHHHHHHHh--CCCCE-EEEeCeEEEEec
Confidence 45543322222 23444 445677655553
No 251
>PRK13185 chlL protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional
Probab=37.64 E-value=39 Score=34.63 Aligned_cols=28 Identities=29% Similarity=0.572 Sum_probs=23.0
Q ss_pred cCcHHH--HHhhHHHHHHhCCCcEEEEeec
Q 006091 167 TGGLGD--VCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 167 ~GG~~~--~~~~La~~L~~~GheV~Vit~~ 194 (662)
.||+|+ .+.+||.+|+++|++|.||=..
T Consensus 10 KGGVGKTT~~~nLA~~la~~G~kVLliD~D 39 (270)
T PRK13185 10 KGGIGKSTTSSNLSAAFAKLGKKVLQIGCD 39 (270)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 477765 5789999999999999999543
No 252
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=37.17 E-value=3.1e+02 Score=26.11 Aligned_cols=100 Identities=19% Similarity=0.178 Sum_probs=61.4
Q ss_pred CccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcC-CcEEE-EcCC-ChHHHH---HHH--HhcCEEEEcC
Q 006091 479 YQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYK-DKYRG-WVGF-NVPISH---RIT--AGCDILLMPS 550 (662)
Q Consensus 479 ~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~-~~~~~-~~~~-~~~~~~---~ll--~~aDi~v~PS 550 (662)
..-|.|++.+.++...+.+.++.++|+.+...+...+.+.+.++ .++.+ ..++ ..+... +.+ ..+|++++--
T Consensus 28 r~~g~dl~~~ll~~~~~~~~~v~llG~~~~~~~~~~~~l~~~yp~l~i~g~~~g~~~~~~~~~i~~~I~~~~pdiv~vgl 107 (171)
T cd06533 28 RVTGSDLMPALLELAAQKGLRVFLLGAKPEVLEKAAERLRARYPGLKIVGYHHGYFGPEEEEEIIERINASGADILFVGL 107 (171)
T ss_pred ccCcHHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHHCCCcEEEEecCCCCChhhHHHHHHHHHHcCCCEEEEEC
Confidence 45588999999998877789999999987667777777777654 46666 3443 222211 222 3788887654
Q ss_pred ---CCCCCcHHHHHHHHcCCcEEEeCCccccccc
Q 006091 551 ---RFEPCGLNQLYAMRYGTIPVVHATGGLRDTV 581 (662)
Q Consensus 551 ---~~E~fgl~~lEAma~G~PvVas~~gg~~eii 581 (662)
..|-|.....+.+ ..++ .-.+||.-++.
T Consensus 108 G~PkQE~~~~~~~~~l--~~~v-~~~vG~~~d~~ 138 (171)
T cd06533 108 GAPKQELWIARHKDRL--PVPV-AIGVGGSFDFL 138 (171)
T ss_pred CCCHHHHHHHHHHHHC--CCCE-EEEeceeeEec
Confidence 2455544444443 2333 33366654444
No 253
>PRK10818 cell division inhibitor MinD; Provisional
Probab=36.99 E-value=43 Score=34.25 Aligned_cols=37 Identities=27% Similarity=0.553 Sum_probs=27.4
Q ss_pred eeEEEEeecccCccccCcHHH--HHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~--~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||.-|.+. .||+|+ .+.+||.+|+++|++|.+|=..
T Consensus 2 ~kviav~s~------KGGvGKTt~a~nlA~~la~~g~~vllvD~D 40 (270)
T PRK10818 2 ARIIVVTSG------KGGVGKTTSSAAIATGLAQKGKKTVVIDFD 40 (270)
T ss_pred ceEEEEEeC------CCCCcHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 465555542 466654 7889999999999999999554
No 254
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=36.96 E-value=53 Score=32.00 Aligned_cols=39 Identities=18% Similarity=0.423 Sum_probs=29.3
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
||++.|+..- + .-|-.+.+.+||.+|++.|++|.+|-..
T Consensus 17 ~kvI~v~s~k-g---G~GKTt~a~~LA~~la~~G~rVllID~D 55 (204)
T TIGR01007 17 IKVLLITSVK-P---GEGKSTTSANIAVAFAQAGYKTLLIDGD 55 (204)
T ss_pred CcEEEEecCC-C---CCCHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 7877777531 1 2345668999999999999999998544
No 255
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=36.54 E-value=39 Score=34.86 Aligned_cols=28 Identities=36% Similarity=0.641 Sum_probs=23.4
Q ss_pred cCcHHH--HHhhHHHHHHhCCCcEEEEeec
Q 006091 167 TGGLGD--VCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 167 ~GG~~~--~~~~La~~L~~~GheV~Vit~~ 194 (662)
.||+|+ .+.+||.+|+++|+.|.||=..
T Consensus 9 KGGVGKTT~a~nLA~~La~~G~rVLliD~D 38 (279)
T PRK13230 9 KGGIGKSTTVCNIAAALAESGKKVLVVGCD 38 (279)
T ss_pred CCCCcHHHHHHHHHHHHHhCCCEEEEEeeC
Confidence 488876 5789999999999999999544
No 256
>TIGR03837 efp_adjacent_2 conserved hypothetical protein, PP_1857 family. This model describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=36.22 E-value=2.7e+02 Score=30.13 Aligned_cols=114 Identities=17% Similarity=0.211 Sum_probs=66.2
Q ss_pred HhHHHHHHHhCCCCCCCCCEEEEEecCCCcc-CHHHHHHHHHhccCCCeEEEEEeCCC-hhhHHHHHH--HH-----hhc
Q 006091 451 QCKIALQKELGLPIRPDCPLIGFIGRLDYQK-GIDLIRLAAPEILADDIQFVMLGSGD-PQFESWMRD--TE-----ATY 521 (662)
Q Consensus 451 ~~k~~~r~~lgl~~~~~~~~Il~vGrl~~~K-g~d~Ll~A~~~l~~~d~~lvivG~g~-~~~~~~~~~--l~-----~~~ 521 (662)
..+..+.+++|++..++..+|.. +.+.+ .+..++++++...+ .+++++-.+-. .....++.. +. ...
T Consensus 165 ~~~~~~~~~lg~~~~~~~~~vSL---F~Ye~~al~~ll~~~~~~~~-pv~lLvp~Gr~~~~v~~~l~~~~~~~g~~~~~g 240 (371)
T TIGR03837 165 AAQRALLRRLGVGPEPDALLVSL---FCYENAALPALLDALAQSGS-PVHLLVPEGRALAAVAAWLGDALLAAGDVHRRG 240 (371)
T ss_pred HHHHHHHHHcCCCCCCCCeEEEE---EecCChhHHHHHHHHHhCCC-CeEEEecCCccHHHHHHHhCccccCCccccccC
Confidence 34567888999963345444432 34444 48999999987643 46655543321 112221110 00 011
Q ss_pred CCcEEEEcCC-ChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCC
Q 006091 522 KDKYRGWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT 574 (662)
Q Consensus 522 ~~~~~~~~~~-~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~ 574 (662)
+..+ ..++| +++...+++..||+-++=... +.+-|+.+|+|.|=.=.
T Consensus 241 ~L~~-~~LPf~~Q~~yD~LLW~cD~NfVRGED-----SFVRAqWAgkPfvWhIY 288 (371)
T TIGR03837 241 ALTV-AVLPFVPQDDYDRLLWACDLNFVRGED-----SFVRAQWAGKPFVWHIY 288 (371)
T ss_pred ceEE-EEcCCCChhhHHHHHHhChhcEeechh-----HHHHHHHcCCCceeecc
Confidence 1112 23344 455667899999998765544 78999999999997643
No 257
>PF09140 MipZ: ATPase MipZ; InterPro: IPR015223 Cell division in bacteria is facilitated by a polymeric ring structure, the Z ring, composed of tubulin-like FtsZ protofilaments. Correct positioning of the division plane is a prerequisite for the generation of daughter cells with a normal chromosome complement. In Caulobacter crescentus MipZ, an essential protein, coordinates and regulates the assembly of the FtsZ cytokinetic ring during cell division. MipZ, forms a complex with the partitioning protein ParB near the origin of replication and localizes with the duplicated origin regions to the cell poles. MipZ also directly interferes with FtsZ polymerisation, thereby restricting FtsZ ring formation to mid-cell, the region of lowest MipZ concentration. In eukaryotes members of this entry belong to the Mrp/NBP35 ATP-binding protein family, and specifically the NUBP2/CFD1 subfamily. This includes the cytosolic Fe-S cluster assembly factor Cfd1, which is a component of the cytosolic iron-sulphur (Fe/S) protein assembly machinery. This protein is required for maturation of extra-mitochondrial Fe/S proteins. It may bind and transfer a labile 4Fe-4S cluster to target apoproteins. Cfd1 is also required for biogenesis and export of both ribosomal subunits, suggesting a role in assembly of the Fe/S clusters in RLI1, a protein which performs rRNA processing and ribosome export. ; PDB: 2XIT_B 2XJ4_A 2XJ9_A.
Probab=36.18 E-value=42 Score=34.24 Aligned_cols=28 Identities=39% Similarity=0.586 Sum_probs=20.2
Q ss_pred cCcHHH--HHhhHHHHHHhCCCcEEEEeec
Q 006091 167 TGGLGD--VCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 167 ~GG~~~--~~~~La~~L~~~GheV~Vit~~ 194 (662)
.||+|+ .+.++|.+|+..|+.|-++=..
T Consensus 9 KGGvGKSTva~~lA~aLa~~G~kVg~lD~D 38 (261)
T PF09140_consen 9 KGGVGKSTVAVNLAVALARMGKKVGLLDLD 38 (261)
T ss_dssp STTTTHHHHHHHHHHHHHCTT--EEEEE--
T ss_pred CCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 466665 7789999999999999999544
No 258
>PRK00211 sulfur relay protein TusC; Validated
Probab=36.15 E-value=62 Score=29.00 Aligned_cols=39 Identities=26% Similarity=0.151 Sum_probs=29.4
Q ss_pred eeEEEEeecccCccccCc-HHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGG-LGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG-~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||+|+... .|| |. .++-..+++.++++.+++|.|+-..
T Consensus 2 ~ki~~i~~~-~Py---g~~~~~eaLd~ala~~a~~~~v~vff~~ 41 (119)
T PRK00211 2 KRIAFVFRQ-APH---GTASGREGLDALLATSAFTEDIGVFFID 41 (119)
T ss_pred ceEEEEecC-CCC---CCHHHHHHHHHHHHHhcccCCeeEEEEh
Confidence 579988875 686 43 5556667788889999999998644
No 259
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=35.25 E-value=53 Score=33.87 Aligned_cols=36 Identities=28% Similarity=0.526 Sum_probs=29.4
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
..++-++||.- ++|+| ..+|+.|+++||+|.+++-+
T Consensus 4 ~~~~~~lITGA------SsGIG---~~~A~~lA~~g~~liLvaR~ 39 (265)
T COG0300 4 MKGKTALITGA------SSGIG---AELAKQLARRGYNLILVARR 39 (265)
T ss_pred CCCcEEEEECC------CchHH---HHHHHHHHHCCCEEEEEeCc
Confidence 45667778752 68998 67999999999999999865
No 260
>TIGR01754 flav_RNR ribonucleotide reductase-associated flavodoxin, putative. This model represents a family of proteins found immediately downstream of ribonucleotide reductase genes in Xyella fastidiosa and some Gram-positive bacteria. It appears to be a highly divergent flavodoxin of the short chain type, more like the flavodoxins of the sulfate-reducing genus Desulfovibrio than like the NifF flavodoxins associated with nitrogen fixation.
Probab=34.18 E-value=59 Score=29.72 Aligned_cols=34 Identities=21% Similarity=0.261 Sum_probs=28.0
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEE
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMV 190 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~V 190 (662)
|||+++-.. .+|.....+..++..|.+.|++|.+
T Consensus 1 M~i~IiY~S-----~tGnTe~iA~~ia~~l~~~g~~v~~ 34 (140)
T TIGR01754 1 MRILLAYLS-----LSGNTEEVAFMIQDYLQKDGHEVDI 34 (140)
T ss_pred CeEEEEEEC-----CCChHHHHHHHHHHHHhhCCeeEEe
Confidence 788777542 3688999999999999999999874
No 261
>PHA02518 ParA-like protein; Provisional
Probab=34.15 E-value=45 Score=32.39 Aligned_cols=28 Identities=39% Similarity=0.625 Sum_probs=23.1
Q ss_pred cCcHHH--HHhhHHHHHHhCCCcEEEEeec
Q 006091 167 TGGLGD--VCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 167 ~GG~~~--~~~~La~~L~~~GheV~Vit~~ 194 (662)
.||+|+ .+.+||.+|+++|+.|.+|-..
T Consensus 9 KGGvGKTT~a~~la~~la~~g~~vlliD~D 38 (211)
T PHA02518 9 KGGAGKTTVATNLASWLHADGHKVLLVDLD 38 (211)
T ss_pred CCCCCHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 476665 6788999999999999999654
No 262
>PRK06703 flavodoxin; Provisional
Probab=34.09 E-value=69 Score=29.62 Aligned_cols=38 Identities=24% Similarity=0.302 Sum_probs=30.5
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
+|||+++-.. . +|....++..++..|.+.|++|.++-.
T Consensus 1 mmkv~IiY~S--~---tGnT~~iA~~ia~~l~~~g~~v~~~~~ 38 (151)
T PRK06703 1 MAKILIAYAS--M---SGNTEDIADLIKVSLDAFDHEVVLQEM 38 (151)
T ss_pred CCeEEEEEEC--C---CchHHHHHHHHHHHHHhcCCceEEEeh
Confidence 3777766542 2 699999999999999999999998754
No 263
>COG0512 PabA Anthranilate/para-aminobenzoate synthases component II [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=34.09 E-value=49 Score=32.28 Aligned_cols=34 Identities=21% Similarity=0.152 Sum_probs=28.1
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
+|+|++|-++ -.++++|+..|.+.|++|+|+-..
T Consensus 1 ~~~IL~IDNy----------DSFtyNLv~yl~~lg~~v~V~rnd 34 (191)
T COG0512 1 MMMILLIDNY----------DSFTYNLVQYLRELGAEVTVVRND 34 (191)
T ss_pred CceEEEEECc----------cchHHHHHHHHHHcCCceEEEECC
Confidence 4789988763 567999999999999999998543
No 264
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=34.08 E-value=53 Score=33.66 Aligned_cols=37 Identities=24% Similarity=0.416 Sum_probs=26.9
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCC
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~ 196 (662)
||||+.+..... .-| ...|+++|.+ +|+|+|++|...
T Consensus 1 M~ILvtNDDGi~---apG----l~aL~~~l~~-~~~V~VvAP~~~ 37 (253)
T PRK13933 1 MNILLTNDDGIN---AEG----INTLAELLSK-YHEVIIVAPENQ 37 (253)
T ss_pred CeEEEEcCCCCC---Chh----HHHHHHHHHh-CCcEEEEccCCC
Confidence 899988876433 223 6777888876 579999998753
No 265
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=34.05 E-value=19 Score=40.60 Aligned_cols=27 Identities=33% Similarity=0.351 Sum_probs=21.7
Q ss_pred cHHHHHhhHHHHHHhCCCcEEEEeecC
Q 006091 169 GLGDVCGSLPVALAARGHRVMVVSPRY 195 (662)
Q Consensus 169 G~~~~~~~La~~L~~~GheV~Vit~~~ 195 (662)
.=-..+..++++|+++||+|+++++..
T Consensus 11 SH~~~~~~l~~~L~~rGH~VTvl~~~~ 37 (500)
T PF00201_consen 11 SHFIFMRPLAEELAERGHNVTVLTPSP 37 (500)
T ss_dssp -SHHHHHHHHHHHHHH-TTSEEEHHHH
T ss_pred CHHHHHHHHHHHHHhcCCceEEEEeec
Confidence 345678999999999999999998763
No 266
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=33.82 E-value=56 Score=37.57 Aligned_cols=33 Identities=27% Similarity=0.364 Sum_probs=23.3
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|+++|+.- .||+| ..+++.|.++||+|.++...
T Consensus 81 KvVLVTGA------TGgIG---~aLAr~LLk~G~~Vval~Rn 113 (576)
T PLN03209 81 DLAFVAGA------TGKVG---SRTVRELLKLGFRVRAGVRS 113 (576)
T ss_pred CEEEEECC------CCHHH---HHHHHHHHHCCCeEEEEeCC
Confidence 56667631 46666 45677899999999988543
No 267
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=33.68 E-value=1.2e+02 Score=31.05 Aligned_cols=44 Identities=23% Similarity=0.192 Sum_probs=31.9
Q ss_pred HHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCccccc
Q 006091 536 SHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRD 579 (662)
Q Consensus 536 ~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~e 579 (662)
+.+++..+|+++.-+..+...-.+..|+..|+|+|...+|-..+
T Consensus 54 l~~ll~~~DvVid~t~p~~~~~~~~~al~~G~~vvigttG~s~~ 97 (257)
T PRK00048 54 LEAVLADADVLIDFTTPEATLENLEFALEHGKPLVIGTTGFTEE 97 (257)
T ss_pred HHHhccCCCEEEECCCHHHHHHHHHHHHHcCCCEEEECCCCCHH
Confidence 33566689999977765555556788999999999876654433
No 268
>PRK13234 nifH nitrogenase reductase; Reviewed
Probab=33.63 E-value=52 Score=34.43 Aligned_cols=37 Identities=19% Similarity=0.383 Sum_probs=28.2
Q ss_pred ceeEEEEeecccCccccCcHHH--HHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~--~~~~La~~L~~~GheV~Vit~~ 194 (662)
+|||.-|+. .||+|+ .+.+||.+|+++|++|.+|-..
T Consensus 3 ~~~~iai~~-------KGGvGKTt~~~nLa~~la~~g~kVLliD~D 41 (295)
T PRK13234 3 KLRQIAFYG-------KGGIGKSTTSQNTLAALVEMGQKILIVGCD 41 (295)
T ss_pred cceEEEEEC-------CCCccHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 577665542 477776 5689999999999999999543
No 269
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=33.58 E-value=53 Score=33.76 Aligned_cols=32 Identities=22% Similarity=0.462 Sum_probs=25.6
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||+++ ||.+. -..|+..|.++||+|.+.+..
T Consensus 1 m~ILvl----------GGT~e-gr~la~~L~~~g~~v~~s~~t 32 (256)
T TIGR00715 1 MTVLLM----------GGTVD-SRAIAKGLIAQGIEILVTVTT 32 (256)
T ss_pred CeEEEE----------echHH-HHHHHHHHHhCCCeEEEEEcc
Confidence 677765 56665 899999999999999987654
No 270
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=33.56 E-value=48 Score=31.65 Aligned_cols=28 Identities=32% Similarity=0.706 Sum_probs=22.1
Q ss_pred cCcHH--HHHhhHHHHHHhCCCcEEEEeec
Q 006091 167 TGGLG--DVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 167 ~GG~~--~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.||+| +.+..||..|+++|+.|.++-..
T Consensus 7 kGG~GKTt~a~~la~~la~~g~~VlliD~D 36 (195)
T PF01656_consen 7 KGGVGKTTIAANLAQALARKGKKVLLIDLD 36 (195)
T ss_dssp STTSSHHHHHHHHHHHHHHTTS-EEEEEES
T ss_pred CCCccHHHHHHHHHhccccccccccccccC
Confidence 35554 57889999999999999999765
No 271
>PRK05647 purN phosphoribosylglycinamide formyltransferase; Reviewed
Probab=33.48 E-value=1.5e+02 Score=29.25 Aligned_cols=35 Identities=23% Similarity=0.211 Sum_probs=24.8
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCC--CcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG--HRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~G--heV~Vit~~ 194 (662)
+|||+++.+ |.+.....+..++.+.+ ++|.++.+.
T Consensus 1 m~ki~vl~s---------g~gs~~~~ll~~~~~~~~~~~I~~vvs~ 37 (200)
T PRK05647 1 MKRIVVLAS---------GNGSNLQAIIDACAAGQLPAEIVAVISD 37 (200)
T ss_pred CceEEEEEc---------CCChhHHHHHHHHHcCCCCcEEEEEEec
Confidence 489999874 34667788888888875 566655444
No 272
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=33.15 E-value=4.8e+02 Score=25.65 Aligned_cols=106 Identities=8% Similarity=0.026 Sum_probs=61.0
Q ss_pred EEEEecCCC--ccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHH---hhc-CCcEEEEcCCChHHHHHHHHhcC
Q 006091 471 IGFIGRLDY--QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTE---ATY-KDKYRGWVGFNVPISHRITAGCD 544 (662)
Q Consensus 471 Il~vGrl~~--~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~---~~~-~~~~~~~~~~~~~~~~~ll~~aD 544 (662)
++.-|...+ .-+.+.|.+.+..+..++.+++++.......+++..... ... ...+........+...+.+..||
T Consensus 3 ~~igg~~~~~~~~~~~~l~~~l~~~~~~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~~~~~~~~l~~ad 82 (212)
T cd03146 3 LLTSGGGLGYLAHALPAIDDLLLSLTKARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFDTEDPLDALLEAD 82 (212)
T ss_pred EEEeCCcccccccchHHHHHHHHHhccCCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccCcccHHHHHhcCC
Confidence 444444444 346667777777665567899999886533333333332 223 33333332222333457889999
Q ss_pred EEEEcCC--------CCCCcH--HHHHHHHcCCcEEEeCCcc
Q 006091 545 ILLMPSR--------FEPCGL--NQLYAMRYGTIPVVHATGG 576 (662)
Q Consensus 545 i~v~PS~--------~E~fgl--~~lEAma~G~PvVas~~gg 576 (662)
++++|-= +...++ .+-++...|+|++.+..|.
T Consensus 83 ~I~l~GG~~~~~~~~l~~~~l~~~l~~~~~~g~~i~G~SAGa 124 (212)
T cd03146 83 VIYVGGGNTFNLLAQWREHGLDAILKAALERGVVYIGWSAGS 124 (212)
T ss_pred EEEECCchHHHHHHHHHHcCHHHHHHHHHHCCCEEEEECHhH
Confidence 9999962 112233 3345566799999987763
No 273
>PRK11104 hemG protoporphyrinogen oxidase; Provisional
Probab=33.01 E-value=52 Score=31.62 Aligned_cols=35 Identities=17% Similarity=0.296 Sum_probs=28.8
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEe
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit 192 (662)
|||+++-. ...|-...++..++..|.. |++|.++-
T Consensus 1 MkilIvY~-----S~~G~T~~iA~~Ia~~l~~-g~~v~~~~ 35 (177)
T PRK11104 1 MKTLILYS-----SRDGQTRKIASYIASELKE-GIQCDVVN 35 (177)
T ss_pred CcEEEEEE-----CCCChHHHHHHHHHHHhCC-CCeEEEEE
Confidence 78887764 2468888899999999998 99998874
No 274
>COG1553 DsrE Uncharacterized conserved protein involved in intracellular sulfur reduction [Inorganic ion transport and metabolism]
Probab=32.93 E-value=82 Score=28.46 Aligned_cols=38 Identities=18% Similarity=0.182 Sum_probs=28.1
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCC-CcEEEEe
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG-HRVMVVS 192 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~G-heV~Vit 192 (662)
||++++... +||- -=....+.++|.+|.+.| ++|.|+-
T Consensus 1 m~~~Ivvt~-ppYg--~q~a~~A~~fA~all~~gh~~v~iFl 39 (126)
T COG1553 1 MKYTIVVTG-PPYG--TESAFSALRFAEALLEQGHELVRLFL 39 (126)
T ss_pred CeEEEEEec-CCCc--cHHHHHHHHHHHHHHHcCCeEEEEEE
Confidence 788877764 6762 234567899999999996 7788874
No 275
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=32.77 E-value=3.9e+02 Score=26.68 Aligned_cols=117 Identities=17% Similarity=0.261 Sum_probs=58.4
Q ss_pred CCEEEEEecC-CCccCHHHHHHHHHhccCC--CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcC
Q 006091 468 CPLIGFIGRL-DYQKGIDLIRLAAPEILAD--DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 544 (662)
Q Consensus 468 ~~~Il~vGrl-~~~Kg~d~Ll~A~~~l~~~--d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aD 544 (662)
..+++|+|.- ...+. .|+..+++|++. .+.++.+|......+.+...+... +.+ =..|.
T Consensus 108 ~riVvFvGSpi~e~ek--eLv~~akrlkk~~Vaidii~FGE~~~~~e~l~~fida~-N~~---------------~~gsh 169 (259)
T KOG2884|consen 108 QRIVVFVGSPIEESEK--ELVKLAKRLKKNKVAIDIINFGEAENNTEKLFEFIDAL-NGK---------------GDGSH 169 (259)
T ss_pred eEEEEEecCcchhhHH--HHHHHHHHHHhcCeeEEEEEeccccccHHHHHHHHHHh-cCC---------------CCCce
Confidence 4688999974 33333 666777777665 456677777542222222222211 110 01233
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccc-cccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 545 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLR-DTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 545 i~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~-eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
++..|+ |- +|+-...-.|++.-+.|+.. ..... +...-|-++|.+.-+||-||+--++
T Consensus 170 lv~Vpp-----g~-~L~d~l~ssPii~ge~g~a~~~~~a~---------g~~f~fgvdp~~DPELAlALRlSME 228 (259)
T KOG2884|consen 170 LVSVPP-----GP-LLSDALLSSPIIQGEDGGAAAGLGAN---------GMDFEFGVDPEDDPELALALRLSME 228 (259)
T ss_pred EEEeCC-----Cc-cHHHHhhcCceeccCccccccccccc---------ccccccCCCcccCHHHHHHHHhhHH
Confidence 444443 11 23333344577776544332 22111 1223344567777789999987776
No 276
>PF02525 Flavodoxin_2: Flavodoxin-like fold; InterPro: IPR003680 This family consists of a domain with a flavodoxin-like fold. The family includes bacterial and eukaryotic NAD(P)H dehydrogenase (quinone) 1.6.99.2 from EC. These enzymes catalyse the NAD(P)H-dependent two-electron reductions of quinones and protect cells against damage by free radicals and reactive oxygen species []. This enzyme uses a FAD cofactor. The equation for this reaction is NAD(P)H + acceptor = NAD(P)(+) + reduced acceptor. This enzyme is also involved in the bioactivation of prodrugs used in chemotherapy []. The family also includes acyl carrier protein phosphodiesterase 3.1.4.14 from EC. This enzyme converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine residue from ACP []. This family is related to FMN_red IPR005025 from INTERPRO and Flavodoxin_1 IPR008254 from INTERPRO.; GO: 0009055 electron carrier activity, 0016491 oxidoreductase activity, 0050662 coenzyme binding; PDB: 1T5B_B 1DXQ_B 2B3D_A 2Z9D_B 2Z9C_A 2Z98_A 2D5I_A 2Z9B_A 1TIK_A 1V4B_A ....
Probab=32.76 E-value=60 Score=31.55 Aligned_cols=38 Identities=21% Similarity=0.418 Sum_probs=27.6
Q ss_pred eeEEEEeecccCccccCcH-HHHHhhHHHHHHhCC-CcEEEEe
Q 006091 152 YNIVFVTAEAAPYSKTGGL-GDVCGSLPVALAARG-HRVMVVS 192 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~-~~~~~~La~~L~~~G-heV~Vit 192 (662)
|||++|..+ |.. .++. ......+.++|.+.| |+|.++=
T Consensus 1 mkiLvI~as--p~~-~~S~s~~l~~~~~~~~~~~~~~~v~~~d 40 (199)
T PF02525_consen 1 MKILVINAS--PRP-EGSFSRALADAFLEGLQEAGPHEVEIRD 40 (199)
T ss_dssp EEEEEEE----SST-TTSHHHHHHHHHHHHHHHHTTSEEEEEE
T ss_pred CEEEEEEcC--CCC-ccCHHHHHHHHHHHHHHHcCCCEEEEEE
Confidence 899999976 431 1344 556788899999999 9999984
No 277
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=32.69 E-value=2.1e+02 Score=24.80 Aligned_cols=36 Identities=14% Similarity=0.128 Sum_probs=28.1
Q ss_pred HHHH--hcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeC
Q 006091 538 RITA--GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA 573 (662)
Q Consensus 538 ~ll~--~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~ 573 (662)
+++. ..|++++.+....-.-.+.+++..|++|++-.
T Consensus 56 ~ll~~~~~D~V~I~tp~~~h~~~~~~~l~~g~~v~~EK 93 (120)
T PF01408_consen 56 ELLADEDVDAVIIATPPSSHAEIAKKALEAGKHVLVEK 93 (120)
T ss_dssp HHHHHTTESEEEEESSGGGHHHHHHHHHHTTSEEEEES
T ss_pred HHHHhhcCCEEEEecCCcchHHHHHHHHHcCCEEEEEc
Confidence 4666 78999888877665667788999999888765
No 278
>PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional
Probab=32.31 E-value=60 Score=33.22 Aligned_cols=37 Identities=22% Similarity=0.201 Sum_probs=27.9
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCC
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~ 196 (662)
||||+.+..... +.-...|+++|.+. |+|+|++|...
T Consensus 1 M~ILlTNDDGi~-------a~Gi~aL~~~l~~~-~~V~VvAP~~~ 37 (250)
T PRK00346 1 MRILLTNDDGIH-------APGIRALAEALREL-ADVTVVAPDRE 37 (250)
T ss_pred CeEEEECCCCCC-------ChhHHHHHHHHHhC-CCEEEEeCCCC
Confidence 899988875322 23367888999998 79999998753
No 279
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=32.07 E-value=2.8e+02 Score=27.39 Aligned_cols=37 Identities=8% Similarity=0.119 Sum_probs=30.6
Q ss_pred ChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeC
Q 006091 532 NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA 573 (662)
Q Consensus 532 ~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~ 573 (662)
+..+...+++.||++|....+ ..+=|+++|+|+|+-.
T Consensus 247 ~~~~~~~~~~~~~~~Is~RlH-----~~I~a~~~g~P~i~i~ 283 (286)
T PF04230_consen 247 SPDELLELISQADLVISMRLH-----GAILALSLGVPVIAIS 283 (286)
T ss_pred CHHHHHHHHhcCCEEEecCCH-----HHHHHHHcCCCEEEEe
Confidence 455667899999999988877 5666999999999854
No 280
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=31.84 E-value=69 Score=32.25 Aligned_cols=33 Identities=24% Similarity=0.267 Sum_probs=23.4
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
+|+|+++.. +|++| ..+++.|.+.||+|.+++-
T Consensus 17 ~~~ilItGa-------sG~iG---~~l~~~L~~~g~~V~~~~R 49 (251)
T PLN00141 17 TKTVFVAGA-------TGRTG---KRIVEQLLAKGFAVKAGVR 49 (251)
T ss_pred CCeEEEECC-------CcHHH---HHHHHHHHhCCCEEEEEec
Confidence 477776643 36666 5577788889999988753
No 281
>PRK13705 plasmid-partitioning protein SopA; Provisional
Probab=31.55 E-value=68 Score=35.12 Aligned_cols=37 Identities=35% Similarity=0.428 Sum_probs=28.0
Q ss_pred CceeEEEEeecccCccccCcHHH--HHhhHHHHHHhCCCcEEEEe
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVS 192 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~--~~~~La~~L~~~GheV~Vit 192 (662)
.+++|+-|++. .||+|+ .+.+||.+|+.+|+.|.||=
T Consensus 104 ~~~~vIai~n~------KGGVGKTT~a~nLA~~LA~~G~rVLlID 142 (388)
T PRK13705 104 VFPPVIGVAAH------KGGVYKTSVSVHLAQDLALKGLRVLLVE 142 (388)
T ss_pred CCCeEEEEECC------CCCchHHHHHHHHHHHHHhcCCCeEEEc
Confidence 34666555542 588776 56899999999999999984
No 282
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=31.41 E-value=75 Score=30.20 Aligned_cols=38 Identities=29% Similarity=0.290 Sum_probs=32.0
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
+|+|+-|+.. +-+|=.+.+..+.+.|.++|+.|.+|--
T Consensus 1 m~~Il~ivG~-----k~SGKTTLie~lv~~L~~~G~rVa~iKH 38 (161)
T COG1763 1 MMKILGIVGY-----KNSGKTTLIEKLVRKLKARGYRVATVKH 38 (161)
T ss_pred CCcEEEEEec-----CCCChhhHHHHHHHHHHhCCcEEEEEEe
Confidence 4888888762 3578999999999999999999999953
No 283
>TIGR01969 minD_arch cell division ATPase MinD, archaeal. This model represents the archaeal branch of the MinD family. MinD, a weak ATPase, works in bacteria with MinC as a generalized cell division inhibitor and, through interaction with MinE, prevents septum placement inappropriate sites. Often several members of this family are found in archaeal genomes, and the function is uncharacterized. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. The exact roles of the various archaeal MinD homologs are unknown.
Probab=31.31 E-value=54 Score=32.84 Aligned_cols=28 Identities=36% Similarity=0.638 Sum_probs=22.3
Q ss_pred cCcHHH--HHhhHHHHHHhCCCcEEEEeec
Q 006091 167 TGGLGD--VCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 167 ~GG~~~--~~~~La~~L~~~GheV~Vit~~ 194 (662)
.||+|+ .+.+||.+|+++|+.|.+|=..
T Consensus 9 KGGvGKTt~a~~LA~~la~~g~~VlliD~D 38 (251)
T TIGR01969 9 KGGTGKTTITANLGVALAKLGKKVLALDAD 38 (251)
T ss_pred CCCCcHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 466665 6677999999999999999544
No 284
>PRK13934 stationary phase survival protein SurE; Provisional
Probab=31.25 E-value=63 Score=33.34 Aligned_cols=37 Identities=19% Similarity=0.146 Sum_probs=27.3
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCC
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~ 196 (662)
|||++.+..... +.-...|+++|.+.| +|+|++|...
T Consensus 1 M~ILlTNDDGi~-------apGi~aL~~al~~~g-~V~VvAP~~e 37 (266)
T PRK13934 1 MKILVTNDDGVH-------SPGLRLLYEFVSPLG-EVDVVAPETP 37 (266)
T ss_pred CeEEEEcCCCCC-------CHHHHHHHHHHHhCC-cEEEEccCCC
Confidence 899988876332 233677888888887 8999998753
No 285
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=31.19 E-value=54 Score=36.50 Aligned_cols=36 Identities=36% Similarity=0.481 Sum_probs=28.0
Q ss_pred cCCceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 148 ~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
.+++|||++. ||.|-.=..|++.|.++||+|.++..
T Consensus 117 ~~~~mkILVT----------GatGFIGs~Lv~~Ll~~G~~V~~ldr 152 (436)
T PLN02166 117 GRKRLRIVVT----------GGAGFVGSHLVDKLIGRGDEVIVIDN 152 (436)
T ss_pred ccCCCEEEEE----------CCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 3457998754 56666668899999999999998863
No 286
>CHL00194 ycf39 Ycf39; Provisional
Probab=31.01 E-value=54 Score=34.46 Aligned_cols=27 Identities=15% Similarity=0.196 Sum_probs=21.0
Q ss_pred CcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 168 GGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 168 GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
||.|..=..+++.|.++||+|.+++-.
T Consensus 7 GatG~iG~~lv~~Ll~~g~~V~~l~R~ 33 (317)
T CHL00194 7 GATGTLGRQIVRQALDEGYQVRCLVRN 33 (317)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEEEcC
Confidence 555555567889999999999998744
No 287
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=30.76 E-value=2.6e+02 Score=30.44 Aligned_cols=115 Identities=16% Similarity=0.189 Sum_probs=68.6
Q ss_pred hHHHHHHHhCCCC-CCCCCEEEEEecCCCccC-HHHHHHHHHhccCCCeEEEEEeCCC-hhhHHHHH--HHHh----hcC
Q 006091 452 CKIALQKELGLPI-RPDCPLIGFIGRLDYQKG-IDLIRLAAPEILADDIQFVMLGSGD-PQFESWMR--DTEA----TYK 522 (662)
Q Consensus 452 ~k~~~r~~lgl~~-~~~~~~Il~vGrl~~~Kg-~d~Ll~A~~~l~~~d~~lvivG~g~-~~~~~~~~--~l~~----~~~ 522 (662)
.+.++.+++|++. .++..+|.. +.+.+. +..++++++... +.+.+++.++-. .....+.. .+.. ...
T Consensus 167 ~~~~~~~~lg~~~~~~~~~~vsl---F~Ye~~~l~~ll~~~~~~~-~pv~llvp~g~~~~~~~~~~~~~~~~~g~~~~~g 242 (374)
T PF10093_consen 167 ARAAFLRRLGLPEPEPGALRVSL---FCYENAALASLLDAWAASP-KPVHLLVPEGRALNSLAAWLGDALLQAGDSWQRG 242 (374)
T ss_pred HHHHHHHHcCCCCCCCCCeEEEE---EeCCchHHHHHHHHHhcCC-CCeEEEecCCccHHHHHHHhccccccCccccccC
Confidence 4678999999852 233343332 245555 888999988663 356777665532 12211111 0000 011
Q ss_pred CcEEEEcCC-ChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCc
Q 006091 523 DKYRGWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG 575 (662)
Q Consensus 523 ~~~~~~~~~-~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~g 575 (662)
.--+..++| +++...+++..||+-++=... +.+-|+.+|+|.|=.=..
T Consensus 243 ~l~l~~lPF~~Q~~yD~LLw~cD~NfVRGED-----SfVRAqwAgkPFvWhIYp 291 (374)
T PF10093_consen 243 NLTLHVLPFVPQDDYDRLLWACDFNFVRGED-----SFVRAQWAGKPFVWHIYP 291 (374)
T ss_pred CeEEEECCCCCHHHHHHHHHhCccceEecch-----HHHHHHHhCCCceEecCc
Confidence 112234444 566677899999998765544 788899999999976433
No 288
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=30.70 E-value=62 Score=30.45 Aligned_cols=31 Identities=29% Similarity=0.425 Sum_probs=23.8
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEe
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit 192 (662)
+|||.||. .+.+=..+++.|.+.||+|.++-
T Consensus 1 m~~Ig~IG-----------lG~mG~~~a~~L~~~g~~v~~~d 31 (163)
T PF03446_consen 1 MMKIGFIG-----------LGNMGSAMARNLAKAGYEVTVYD 31 (163)
T ss_dssp -BEEEEE-------------SHHHHHHHHHHHHTTTEEEEEE
T ss_pred CCEEEEEc-----------hHHHHHHHHHHHHhcCCeEEeec
Confidence 47788874 46667889999999999999864
No 289
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=30.69 E-value=65 Score=33.00 Aligned_cols=38 Identities=24% Similarity=0.232 Sum_probs=26.7
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCC
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 197 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~ 197 (662)
||||+.+....- +.-...|+++|++ +|+|.|++|...+
T Consensus 1 M~ILlTNDDGi~-------a~Gi~aL~~~l~~-~~~V~VvAP~~~q 38 (253)
T PRK13935 1 MNILVTNDDGIT-------SPGIIILAEYLSE-KHEVFVVAPDKER 38 (253)
T ss_pred CeEEEECCCCCC-------CHHHHHHHHHHHh-CCcEEEEccCCCC
Confidence 899988876332 2225677788865 5799999987543
No 290
>TIGR01968 minD_bact septum site-determining protein MinD. This model describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.
Probab=30.58 E-value=60 Score=32.71 Aligned_cols=28 Identities=32% Similarity=0.617 Sum_probs=22.9
Q ss_pred cCcHHH--HHhhHHHHHHhCCCcEEEEeec
Q 006091 167 TGGLGD--VCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 167 ~GG~~~--~~~~La~~L~~~GheV~Vit~~ 194 (662)
.||+|+ .+.+||.+|++.|++|.+|-..
T Consensus 10 kGGvGKTt~a~~lA~~la~~g~~vlliD~D 39 (261)
T TIGR01968 10 KGGVGKTTTTANLGTALARLGKKVVLIDAD 39 (261)
T ss_pred CCCccHHHHHHHHHHHHHHcCCeEEEEECC
Confidence 466665 7889999999999999998543
No 291
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=30.37 E-value=60 Score=34.13 Aligned_cols=33 Identities=27% Similarity=0.345 Sum_probs=26.3
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.|||+++.. |++|.+ ++-.|++.|++|++++..
T Consensus 2 ~m~I~IiGa--------GaiG~~---~a~~L~~~G~~V~lv~r~ 34 (305)
T PRK05708 2 SMTWHILGA--------GSLGSL---WACRLARAGLPVRLILRD 34 (305)
T ss_pred CceEEEECC--------CHHHHH---HHHHHHhCCCCeEEEEec
Confidence 589999873 888865 556688899999999764
No 292
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=30.37 E-value=5.3e+02 Score=25.21 Aligned_cols=103 Identities=10% Similarity=0.015 Sum_probs=56.2
Q ss_pred ecCCCccCHHHHHHHHHhccCCCeEEEEEeCCC---hhhHHHHHHHHhhcCCcEEEEcCC---ChHHHHHHHHhcCEEEE
Q 006091 475 GRLDYQKGIDLIRLAAPEILADDIQFVMLGSGD---PQFESWMRDTEATYKDKYRGWVGF---NVPISHRITAGCDILLM 548 (662)
Q Consensus 475 Grl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~---~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~ll~~aDi~v~ 548 (662)
|...+....+.+.+.+......+.+++++.... ..+.+...+.-.........+.-. +.+...+.+..||++++
T Consensus 7 G~~~~~~~~~~~~~~~~~~~~~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~l~~ad~I~~ 86 (210)
T cd03129 7 GGLDKAHARPILQDFLARAGGAGARVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLLIDTANDPDVVARLLEADGIFV 86 (210)
T ss_pred CCcCccChHHHHHHHHHHcCCCCCeEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEeccCCCCCHHHHHHHhhCCEEEE
Confidence 333334444444444554433467778876653 122222222222323333333322 23455688999999998
Q ss_pred cCC--------CCC--CcHHHHHHHHcCCcEEEeCCccc
Q 006091 549 PSR--------FEP--CGLNQLYAMRYGTIPVVHATGGL 577 (662)
Q Consensus 549 PS~--------~E~--fgl~~lEAma~G~PvVas~~gg~ 577 (662)
+-= +.. .--.+.+..+.|+|++.+..|.+
T Consensus 87 ~GG~~~~~~~~l~~t~~~~~i~~~~~~G~v~~G~SAGA~ 125 (210)
T cd03129 87 GGGNQLRLLSVLRETPLLDAILKRVARGVVIGGTSAGAA 125 (210)
T ss_pred cCCcHHHHHHHHHhCChHHHHHHHHHcCCeEEEcCHHHH
Confidence 852 222 22256888888999999877644
No 293
>COG1927 Mtd Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase [Energy production and conversion]
Probab=30.30 E-value=3.4e+02 Score=26.86 Aligned_cols=99 Identities=18% Similarity=0.294 Sum_probs=51.4
Q ss_pred EEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChh----hHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEE
Q 006091 471 IGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQ----FESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 546 (662)
Q Consensus 471 Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~ 546 (662)
|+-.|++...-=++++++-.+. ++++.+-++|+|... .+.....+.+.. ..|++
T Consensus 7 ~ik~GniGts~v~dlllDErAd--Redi~vrVvgsgaKM~Pe~veaav~~~~e~~--------------------~pDfv 64 (277)
T COG1927 7 FIKCGNIGTSPVVDLLLDERAD--REDIEVRVVGSGAKMDPECVEAAVTEMLEEF--------------------NPDFV 64 (277)
T ss_pred EEEecccchHHHHHHHHHhhcc--cCCceEEEeccccccChHHHHHHHHHHHHhc--------------------CCCEE
Confidence 3445666544444444443222 258999999998421 122222222222 33444
Q ss_pred EEcCC--CCCCcHHHHHHHH-cCCcEEE-eCCcccc--cccccccccccCCCCccceEEEC
Q 006091 547 LMPSR--FEPCGLNQLYAMR-YGTIPVV-HATGGLR--DTVENFNPFAREGSGEGTGWSFL 601 (662)
Q Consensus 547 v~PS~--~E~fgl~~lEAma-~G~PvVa-s~~gg~~--eii~~~~~~~~~~~~~~~G~l~~ 601 (662)
++-|. --+-|-..-|.++ ++.|+|. ++.+|.+ +-+++ .+-|+++-
T Consensus 65 i~isPNpaaPGP~kARE~l~~s~~PaiiigDaPg~~vkdelee----------qGlGYIiv 115 (277)
T COG1927 65 IYISPNPAAPGPKKAREILSDSDVPAIIIGDAPGLKVKDELEE----------QGLGYIIV 115 (277)
T ss_pred EEeCCCCCCCCchHHHHHHhhcCCCEEEecCCccchhHHHHHh----------cCCeEEEe
Confidence 33333 2345666777776 5788776 5665553 44444 55666653
No 294
>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase. Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.
Probab=30.27 E-value=96 Score=30.40 Aligned_cols=41 Identities=20% Similarity=0.278 Sum_probs=28.0
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHh-CCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~-~GheV~Vit~~ 194 (662)
..|||+.|+.. ...-|-.+.+.+||.+|++ .|++|.+|-..
T Consensus 33 ~~~~vi~v~s~----kgG~GkSt~a~nLA~~la~~~g~~VLlvD~D 74 (207)
T TIGR03018 33 KNNNLIMVTSS----LPGEGKSFTAINLAISLAQEYDKTVLLIDAD 74 (207)
T ss_pred CCCeEEEEECC----CCCCCHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 45776666642 1123455577899999997 69999999544
No 295
>PRK05246 glutathione synthetase; Provisional
Probab=30.25 E-value=45 Score=35.25 Aligned_cols=41 Identities=17% Similarity=0.262 Sum_probs=29.9
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.|||+|+.. |.....-....+..|+++-.++||+|.++++.
T Consensus 1 ~~~~~~~~~---~~~~~~~~~~st~~l~~aa~~~G~~v~~~~~~ 41 (316)
T PRK05246 1 MMKVAFQMD---PIESINIKKDSTFAMMLEAQRRGHELFYYEPD 41 (316)
T ss_pred CceEEEEeC---CHHHCCCCCChHHHHHHHHHHcCCEEEEEehh
Confidence 389999986 32212222344567999999999999999877
No 296
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=30.08 E-value=55 Score=34.05 Aligned_cols=31 Identities=29% Similarity=0.442 Sum_probs=24.0
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
|||+++.. |.++ ..++..|++.||+|++++.
T Consensus 1 mkI~IiG~--------G~iG---~~~a~~L~~~g~~V~~~~r 31 (305)
T PRK12921 1 MRIAVVGA--------GAVG---GTFGGRLLEAGRDVTFLVR 31 (305)
T ss_pred CeEEEECC--------CHHH---HHHHHHHHHCCCceEEEec
Confidence 78888852 5555 5577888899999999875
No 297
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=30.03 E-value=2.1e+02 Score=29.35 Aligned_cols=82 Identities=15% Similarity=0.152 Sum_probs=50.7
Q ss_pred HHHHhcCEEEEcCC-CCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHH
Q 006091 538 RITAGCDILLMPSR-FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAI 616 (662)
Q Consensus 538 ~ll~~aDi~v~PS~-~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l 616 (662)
.-++.||++|.-.. +|++=-.+++.+ .+.+++....++..+ + .....-++.+|.+...+++.|.+.|
T Consensus 48 ~~l~~ADliv~~G~~lE~~~~k~~~~~-~~~~v~~~~~~~~~~---~--------~~~dPH~Wldp~n~~~~a~~I~~~L 115 (264)
T cd01020 48 AKVSTADIVVYNGGGYDPWMTKLLADT-KDVIVIAADLDGHDD---K--------EGDNPHLWYDPETMSKVANALADAL 115 (264)
T ss_pred HHHhhCCEEEEeCCCchHHHHHHHHhc-CCceEEeeecccccC---C--------CCCCCceecCHhHHHHHHHHHHHHH
Confidence 57889999998774 576655666655 455666554433211 1 0012335668899999999999999
Q ss_pred HHhhhCHHHHHHHHHHH
Q 006091 617 RTYREHKSSWEGLMRRG 633 (662)
Q Consensus 617 ~~~~~~~~~~~~l~~~~ 633 (662)
... ||+..+...+++
T Consensus 116 ~~~--dP~~~~~y~~N~ 130 (264)
T cd01020 116 VKA--DPDNKKYYQANA 130 (264)
T ss_pred HHh--CcccHHHHHHHH
Confidence 865 554444444443
No 298
>PLN02778 3,5-epimerase/4-reductase
Probab=30.00 E-value=64 Score=33.67 Aligned_cols=36 Identities=14% Similarity=0.124 Sum_probs=26.3
Q ss_pred cccCCceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEE
Q 006091 146 AQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVV 191 (662)
Q Consensus 146 ~~~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vi 191 (662)
++++..|||++. ||.|-.=..|++.|.++||+|++.
T Consensus 4 ~~~~~~~kiLVt----------G~tGfiG~~l~~~L~~~g~~V~~~ 39 (298)
T PLN02778 4 TAGSATLKFLIY----------GKTGWIGGLLGKLCQEQGIDFHYG 39 (298)
T ss_pred CCCCCCCeEEEE----------CCCCHHHHHHHHHHHhCCCEEEEe
Confidence 455667998855 444555577889999999999754
No 299
>TIGR03012 sulf_tusD_dsrE sulfur relay protein TusD/DsrE. The three proteins TusB, TusC, and TusD form a heterohexamer responsible for a sulfur relay reaction. In large numbers of proteobacterial species, this complex acts on a Cys-derived persulfide moiety, delivered by the cysteine desulfurase IscS to TusA, then to TusBCD. The activated sulfur group is then transferred to TusE (DsrC), then by MnmA (TrmU) for modification of an anticodon nucleotide in tRNAs for Glu, Lys, and Gln. The sulfur relay complex TusBCD is also found, under the designation DsrEFH, in phototrophic and chemotrophic sulfur bacteria, such as Chromatium vinosum. In these organisms, it seems the primary purpose is related to sulfur flux, such as oxidation from sulfide to molecular sulfur to sulfate.
Probab=29.58 E-value=96 Score=28.09 Aligned_cols=37 Identities=22% Similarity=0.343 Sum_probs=27.4
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcE-EEEe
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRV-MVVS 192 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV-~Vit 192 (662)
|++++... .|| .+-.++...++|+++.+.||+| .|+-
T Consensus 1 ~~~iv~~~-~P~--~~~~~~~al~~A~aa~~~gh~v~~vFf 38 (127)
T TIGR03012 1 KYTLLVTG-PPY--GTQAASSAYQFAQALLAKGHEIVRVFF 38 (127)
T ss_pred CEEEEEeC-CCC--CcHHHHHHHHHHHHHHHCCCcEEEEEE
Confidence 45666654 575 3557778999999999999995 6663
No 300
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=29.26 E-value=59 Score=30.65 Aligned_cols=28 Identities=36% Similarity=0.555 Sum_probs=22.5
Q ss_pred cCcHH--HHHhhHHHHHHhCCCcEEEEeec
Q 006091 167 TGGLG--DVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 167 ~GG~~--~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.||+| +.+.+||..|++.|+.|.+|-..
T Consensus 8 kgG~GKTt~a~~LA~~la~~g~~vllvD~D 37 (169)
T cd02037 8 KGGVGKSTVAVNLALALAKLGYKVGLLDAD 37 (169)
T ss_pred CCcCChhHHHHHHHHHHHHcCCcEEEEeCC
Confidence 35555 46789999999999999999544
No 301
>PRK11670 antiporter inner membrane protein; Provisional
Probab=29.11 E-value=72 Score=34.64 Aligned_cols=39 Identities=33% Similarity=0.507 Sum_probs=28.7
Q ss_pred CceeEEEEeecccCccccCcHHH--HHhhHHHHHHhCCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~--~~~~La~~L~~~GheV~Vit~~ 194 (662)
..+||+.|++. .||+|+ .+.+||.+|++.|++|.+|=..
T Consensus 105 ~~~~vIaV~S~------KGGVGKTT~avNLA~aLA~~G~rVlLID~D 145 (369)
T PRK11670 105 GVKNIIAVSSG------KGGVGKSSTAVNLALALAAEGAKVGILDAD 145 (369)
T ss_pred CCCEEEEEeCC------CCCCCHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 34566666542 466665 7889999999999999999543
No 302
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=28.92 E-value=3.6e+02 Score=30.08 Aligned_cols=164 Identities=10% Similarity=-0.004 Sum_probs=0.0
Q ss_pred CCCCEEEEEecCC-----CccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHh--hcCCcEEEEcCCChHHHHH
Q 006091 466 PDCPLIGFIGRLD-----YQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEA--TYKDKYRGWVGFNVPISHR 538 (662)
Q Consensus 466 ~~~~~Il~vGrl~-----~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~ 538 (662)
....+++..|... +.+-...+..+++.+ +++.|++.=..+.... ..+.... ..++....|++ +.+++
T Consensus 276 ~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~--~~~~FiW~~~~~~~~~-~~~~~~~~~~~nV~~~~W~P-Q~~ll-- 349 (496)
T KOG1192|consen 276 RHSVVYISFGSMVNSADLPEEQKKELAKALESL--QGVTFLWKYRPDDSIY-FPEGLPNRGRGNVVLSKWAP-QNDLL-- 349 (496)
T ss_pred cCCeEEEECCcccccccCCHHHHHHHHHHHHhC--CCceEEEEecCCcchh-hhhcCCCCCcCceEEecCCC-cHHHh--
Q ss_pred HHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEE----eCCcccccccccccccccCCCCccceEEECCCCHHHH--HHHH
Q 006091 539 ITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVV----HATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESM--LTAL 612 (662)
Q Consensus 539 ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVa----s~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~l--a~aI 612 (662)
+...-+.++-+.- |++-+ +||+.+|+|+|+ .|..-....+.+ ...+.+....+..+- .+++
T Consensus 350 -l~H~~v~~FvTHg-G~nSt-~E~~~~GvP~v~~Plf~DQ~~Na~~i~~----------~g~~~v~~~~~~~~~~~~~~~ 416 (496)
T KOG1192|consen 350 -LDHPAVGGFVTHG-GWNST-LESIYSGVPMVCVPLFGDQPLNARLLVR----------HGGGGVLDKRDLVSEELLEAI 416 (496)
T ss_pred -cCCCcCcEEEECC-cccHH-HHHHhcCCceecCCccccchhHHHHHHh----------CCCEEEEehhhcCcHHHHHHH
Q ss_pred HHHHHHhhhCHHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHH
Q 006091 613 RFAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEW 653 (662)
Q Consensus 613 ~~~l~~~~~~~~~~~~l~~~~---~~~~fs~e~~a~~~~~iy~~ 653 (662)
..++. +++..+...+-. ..+..+. ..+..+.+.-.+
T Consensus 417 ~~il~----~~~y~~~~~~l~~~~~~~p~~~-~~~~~~~e~~~~ 455 (496)
T KOG1192|consen 417 KEILE----NEEYKEAAKRLSEILRDQPISP-ELAVKWVEFVAR 455 (496)
T ss_pred HHHHc----ChHHHHHHHHHHHHHHcCCCCH-HHHHHHHHHHHh
No 303
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=28.31 E-value=66 Score=32.86 Aligned_cols=38 Identities=24% Similarity=0.274 Sum_probs=28.1
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCC
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 197 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~ 197 (662)
|||++-+.... -+.-+.-|+++|. .+++|+|++|...+
T Consensus 1 mrILlTNDDGi-------~a~Gi~aL~~al~-~~~dV~VVAP~~~q 38 (252)
T COG0496 1 MRILLTNDDGI-------HAPGIRALARALR-EGADVTVVAPDREQ 38 (252)
T ss_pred CeEEEecCCcc-------CCHHHHHHHHHHh-hCCCEEEEccCCCC
Confidence 89998777532 1333677888888 89999999987543
No 304
>COG1922 WecG Teichoic acid biosynthesis proteins [Cell envelope biogenesis, outer membrane]
Probab=28.21 E-value=6.6e+02 Score=25.79 Aligned_cols=101 Identities=22% Similarity=0.206 Sum_probs=60.9
Q ss_pred ccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcC-CcEEEEc-CC-ChHHHHHHH-----HhcCEEEEcCC
Q 006091 480 QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWV-GF-NVPISHRIT-----AGCDILLMPSR 551 (662)
Q Consensus 480 ~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~-~~~~~~~-~~-~~~~~~~ll-----~~aDi~v~PS~ 551 (662)
.-|.|++...++...+++.++.++|+.+.-.+...+.+...++ .++.+.. || +.++..++. ..+|+++.---
T Consensus 91 v~G~Dl~~~Ll~~a~~~~~~vfllGgkp~V~~~a~~~l~~~~p~l~ivg~h~GYf~~~e~~~i~~~I~~s~pdil~VgmG 170 (253)
T COG1922 91 VAGTDLVEALLKRAAEEGKRVFLLGGKPGVAEQAAAKLRAKYPGLKIVGSHDGYFDPEEEEAIVERIAASGPDILLVGMG 170 (253)
T ss_pred CChHHHHHHHHHHhCccCceEEEecCCHHHHHHHHHHHHHHCCCceEEEecCCCCChhhHHHHHHHHHhcCCCEEEEeCC
Confidence 4578888888887777789999999987666667777777766 5666655 55 222222333 37788776542
Q ss_pred ---CCCCcHHHHHHHHcCCcEEEeCCccccccccc
Q 006091 552 ---FEPCGLNQLYAMRYGTIPVVHATGGLRDTVEN 583 (662)
Q Consensus 552 ---~E~fgl~~lEAma~G~PvVas~~gg~~eii~~ 583 (662)
.|-| +..-...=-+.|+-.+||.-|++..
T Consensus 171 ~P~QE~w---i~~~~~~~~~~v~igVGg~fDv~sG 202 (253)
T COG1922 171 VPRQEIW---IARNRQQLPVAVAIGVGGSFDVFSG 202 (253)
T ss_pred CchhHHH---HHHhHHhcCCceEEeccceEEEecC
Confidence 2322 2222221113455667777666643
No 305
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=28.03 E-value=40 Score=30.65 Aligned_cols=34 Identities=35% Similarity=0.414 Sum_probs=25.7
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.+|||.+|. .|++-..|+++|.+.||.|.-+..+
T Consensus 9 ~~l~I~iIG-----------aGrVG~~La~aL~~ag~~v~~v~sr 42 (127)
T PF10727_consen 9 ARLKIGIIG-----------AGRVGTALARALARAGHEVVGVYSR 42 (127)
T ss_dssp ---EEEEEC-----------TSCCCCHHHHHHHHTTSEEEEESSC
T ss_pred CccEEEEEC-----------CCHHHHHHHHHHHHCCCeEEEEEeC
Confidence 469999995 3555688999999999999888654
No 306
>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]
Probab=27.50 E-value=68 Score=32.20 Aligned_cols=36 Identities=31% Similarity=0.562 Sum_probs=28.2
Q ss_pred eEEEEeecccCccccCcHHH--HHhhHHHHHHhCCCcEEEEeec
Q 006091 153 NIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~--~~~~La~~L~~~GheV~Vit~~ 194 (662)
+|..||+- .||+|. .+.+++.+|+++|+.|.+|-..
T Consensus 3 ~iIVvTSG------KGGVGKTTttAnig~aLA~~GkKv~liD~D 40 (272)
T COG2894 3 RIIVVTSG------KGGVGKTTTTANIGTALAQLGKKVVLIDFD 40 (272)
T ss_pred eEEEEecC------CCCcCccchhHHHHHHHHHcCCeEEEEecC
Confidence 56667652 577775 6678999999999999999544
No 307
>PRK07454 short chain dehydrogenase; Provisional
Probab=27.09 E-value=79 Score=31.33 Aligned_cols=34 Identities=24% Similarity=0.427 Sum_probs=24.3
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
.||.++|+.- .||++ ..+++.|.++|++|.+++.
T Consensus 5 ~~k~vlItG~------sg~iG---~~la~~l~~~G~~V~~~~r 38 (241)
T PRK07454 5 SMPRALITGA------SSGIG---KATALAFAKAGWDLALVAR 38 (241)
T ss_pred CCCEEEEeCC------CchHH---HHHHHHHHHCCCEEEEEeC
Confidence 4777777631 35555 6688899999999888764
No 308
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=26.74 E-value=2.4e+02 Score=26.82 Aligned_cols=65 Identities=11% Similarity=0.075 Sum_probs=42.1
Q ss_pred CHHHHHHHHHhccCCCe--EEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEEEcC
Q 006091 482 GIDLIRLAAPEILADDI--QFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPS 550 (662)
Q Consensus 482 g~d~Ll~A~~~l~~~d~--~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~PS 550 (662)
.+.+.++|+..+..+++ -+++-|++ ++..++..+++. ...+.+.- ........+.++||-|+.-.
T Consensus 90 Dv~laIDame~~~~~~iD~~vLvSgD~--DF~~Lv~~lre~-G~~V~v~g-~~~~ts~~L~~acd~FI~L~ 156 (160)
T TIGR00288 90 DVRMAVEAMELIYNPNIDAVALVTRDA--DFLPVINKAKEN-GKETIVIG-AEPGFSTALQNSADIAIILG 156 (160)
T ss_pred cHHHHHHHHHHhccCCCCEEEEEeccH--hHHHHHHHHHHC-CCEEEEEe-CCCCChHHHHHhcCeEEeCC
Confidence 57889999988855544 44444555 588888888776 33444433 23233446889999888654
No 309
>cd02117 NifH_like This family contains the NifH (iron protein) of nitrogenase, L subunit (BchL/ChlL) of the protochlorophyllide reductase and the BchX subunit of the Chlorophyllide reductase. Members of this family use energey from ATP hydrolysis and transfer electrons through a Fe4-S4 cluster to other subunit for reduction of substrate.
Probab=26.71 E-value=76 Score=31.22 Aligned_cols=26 Identities=38% Similarity=0.641 Sum_probs=21.8
Q ss_pred CcHHH--HHhhHHHHHHhCCCcEEEEee
Q 006091 168 GGLGD--VCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 168 GG~~~--~~~~La~~L~~~GheV~Vit~ 193 (662)
||+|+ .+.+||.+|+++|++|.||=.
T Consensus 9 GGvGKTt~~~nLA~~la~~G~rvLliD~ 36 (212)
T cd02117 9 GGIGKSTTSQNLSAALAEMGKKVLQVGC 36 (212)
T ss_pred CcCcHHHHHHHHHHHHHHCCCcEEEEeC
Confidence 66665 679999999999999999843
No 310
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=26.57 E-value=74 Score=34.38 Aligned_cols=34 Identities=21% Similarity=0.296 Sum_probs=27.1
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
.+|||++. ||.|-.=..+++.|.++||+|.+++-
T Consensus 20 ~~~~IlVt----------GgtGfIG~~l~~~L~~~G~~V~~v~r 53 (370)
T PLN02695 20 EKLRICIT----------GAGGFIASHIARRLKAEGHYIIASDW 53 (370)
T ss_pred CCCEEEEE----------CCccHHHHHHHHHHHhCCCEEEEEEe
Confidence 46898854 56666668899999999999999864
No 311
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=26.55 E-value=85 Score=33.00 Aligned_cols=34 Identities=32% Similarity=0.332 Sum_probs=26.2
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
..|||+++. .|.+-..+|..|.+.||+|.++...
T Consensus 3 ~~m~I~iiG-----------~G~~G~~lA~~l~~~G~~V~~~~r~ 36 (308)
T PRK14619 3 QPKTIAILG-----------AGAWGSTLAGLASANGHRVRVWSRR 36 (308)
T ss_pred CCCEEEEEC-----------ccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 358999885 3445577899999999999987643
No 312
>TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG. The proteins in this family are homologs of the EpsG protein found in Methylobacillus strain 12S and are generally found in operons with other Eps homologs. The protein is believed to function as the protein tyrosine kinase component of the chain length regulator (along with the transmembrane component EpsF).
Probab=26.52 E-value=1.1e+02 Score=31.28 Aligned_cols=41 Identities=10% Similarity=0.272 Sum_probs=30.3
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
...|++.|++. .| .-|-.+.+.+||.+|++.|++|.+|=..
T Consensus 101 ~~~~vi~vts~-~~---g~Gktt~a~nLA~~la~~g~~VllID~D 141 (274)
T TIGR03029 101 EGRKALAVVSA-KS---GEGCSYIAANLAIVFSQLGEKTLLIDAN 141 (274)
T ss_pred CCCeEEEEECC-CC---CCCHHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 34566666652 23 3677788999999999999999999543
No 313
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=26.34 E-value=2.7e+02 Score=26.44 Aligned_cols=59 Identities=17% Similarity=0.158 Sum_probs=36.5
Q ss_pred EEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEc
Q 006091 471 IGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWV 529 (662)
Q Consensus 471 Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~ 529 (662)
+-.+|...+.-+.+..-+.+..+.+.+..++++|-|.|.-+.++.......+..+..-+
T Consensus 75 l~ivg~~~g~f~~~~~~~i~~~I~~~~pdiv~vglG~PkQE~~~~~~~~~l~~~v~i~v 133 (172)
T PF03808_consen 75 LRIVGYHHGYFDEEEEEAIINRINASGPDIVFVGLGAPKQERWIARHRQRLPAGVIIGV 133 (172)
T ss_pred eEEEEecCCCCChhhHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEE
Confidence 44555555443444444444444444778899998887778888888877766544333
No 314
>PRK05723 flavodoxin; Provisional
Probab=26.32 E-value=96 Score=29.01 Aligned_cols=36 Identities=14% Similarity=0.167 Sum_probs=29.1
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEe
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit 192 (662)
|||.++-.. .+|-.+.++..+++.|.+.|++|.++.
T Consensus 1 ~~i~I~ygS-----~tG~ae~~A~~la~~l~~~g~~~~~~~ 36 (151)
T PRK05723 1 MKVAILSGS-----VYGTAEEVARHAESLLKAAGFEAWHNP 36 (151)
T ss_pred CeEEEEEEc-----CchHHHHHHHHHHHHHHHCCCceeecC
Confidence 677777432 378899999999999999999998863
No 315
>PRK06027 purU formyltetrahydrofolate deformylase; Reviewed
Probab=26.07 E-value=1e+02 Score=32.29 Aligned_cols=39 Identities=10% Similarity=0.073 Sum_probs=26.5
Q ss_pred cCCceeEEEEeecccCccccCcHHHHHhhHHHHHHhC--CCcEEEEeecC
Q 006091 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR--GHRVMVVSPRY 195 (662)
Q Consensus 148 ~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~--GheV~Vit~~~ 195 (662)
..++|||+++.+ |+ ++-...|..+.... +++|.++..+.
T Consensus 86 ~~~~~ri~vl~S--------g~-gsnl~al~~~~~~~~~~~~i~~visn~ 126 (286)
T PRK06027 86 SAERKRVVILVS--------KE-DHCLGDLLWRWRSGELPVEIAAVISNH 126 (286)
T ss_pred cccCcEEEEEEc--------CC-CCCHHHHHHHHHcCCCCcEEEEEEEcC
Confidence 446899999874 22 55667777776663 57887776664
No 316
>PRK06849 hypothetical protein; Provisional
Probab=25.96 E-value=82 Score=34.25 Aligned_cols=35 Identities=14% Similarity=0.192 Sum_probs=27.0
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.+|+|+++.. -......+++.|.++||+|.++...
T Consensus 3 ~~~~VLI~G~----------~~~~~l~iar~l~~~G~~Vi~~d~~ 37 (389)
T PRK06849 3 TKKTVLITGA----------RAPAALELARLFHNAGHTVILADSL 37 (389)
T ss_pred CCCEEEEeCC----------CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4688887753 2335788999999999999999654
No 317
>PRK05920 aromatic acid decarboxylase; Validated
Probab=25.86 E-value=1e+02 Score=30.48 Aligned_cols=36 Identities=25% Similarity=0.181 Sum_probs=27.0
Q ss_pred ceeEEEEeecccCccccCcHH-HHHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLG-DVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~-~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.+||++-.. ||.+ ..+.++.+.|.+.|++|.|+...
T Consensus 3 ~krIllgIT--------Gsiaa~ka~~lvr~L~~~g~~V~vi~T~ 39 (204)
T PRK05920 3 MKRIVLAIT--------GASGAIYGVRLLECLLAADYEVHLVISK 39 (204)
T ss_pred CCEEEEEEe--------CHHHHHHHHHHHHHHHHCCCEEEEEECh
Confidence 467776653 3333 46788999999999999999765
No 318
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=25.86 E-value=8e+02 Score=26.51 Aligned_cols=104 Identities=13% Similarity=0.097 Sum_probs=64.2
Q ss_pred CCCEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCCh------------hhHHHHHHHHhhcCCcEEEEcCCChH
Q 006091 467 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDP------------QFESWMRDTEATYKDKYRGWVGFNVP 534 (662)
Q Consensus 467 ~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~------------~~~~~~~~l~~~~~~~~~~~~~~~~~ 534 (662)
+.+.++.+| -......+.+++.++.+++..++++.-|.-.+ +--+++++..+.....+.--+ ++..
T Consensus 99 ~~~l~vIAG-PCsIEs~eq~l~~A~~lk~~g~~~~r~g~~kpRtsp~sf~G~g~~gl~~L~~~~~e~Gl~~~tev-~d~~ 176 (352)
T PRK13396 99 NHPVVVVAG-PCSVENEEMIVETAKRVKAAGAKFLRGGAYKPRTSPYAFQGHGESALELLAAAREATGLGIITEV-MDAA 176 (352)
T ss_pred CCeEEEEEe-CCcccCHHHHHHHHHHHHHcCCCEEEeeeecCCCCCcccCCchHHHHHHHHHHHHHcCCcEEEee-CCHH
Confidence 344556666 35566777888888888776777777564321 122344444445555554333 3555
Q ss_pred HHHHHHHhcCEEEEcCCC-CCCcHHHHHHH-HcCCcEEEeCC
Q 006091 535 ISHRITAGCDILLMPSRF-EPCGLNQLYAM-RYGTIPVVHAT 574 (662)
Q Consensus 535 ~~~~ll~~aDi~v~PS~~-E~fgl~~lEAm-a~G~PvVas~~ 574 (662)
.+..+...+|++-++|+. ..|. ++++. ..|+||+.++.
T Consensus 177 ~v~~~~~~~d~lqIga~~~~n~~--LL~~va~t~kPVllk~G 216 (352)
T PRK13396 177 DLEKIAEVADVIQVGARNMQNFS--LLKKVGAQDKPVLLKRG 216 (352)
T ss_pred HHHHHHhhCCeEEECcccccCHH--HHHHHHccCCeEEEeCC
Confidence 554455669999999975 4544 45555 67999999763
No 319
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=25.71 E-value=94 Score=32.34 Aligned_cols=41 Identities=12% Similarity=0.097 Sum_probs=31.7
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||+|++....- ...|=-+.+..||++|.++|..+.-++..
T Consensus 1 M~V~i~~Dgg~~--iGmGHV~R~l~LA~~l~k~~~~~~fl~k~ 41 (318)
T COG3980 1 MKVLIRCDGGLE--IGMGHVMRTLTLARELEKRGFACLFLTKQ 41 (318)
T ss_pred CcEEEEecCCcc--cCcchhhhHHHHHHHHHhcCceEEEeccc
Confidence 899999986433 34555667889999999999887777644
No 320
>PRK00170 azoreductase; Reviewed
Probab=25.56 E-value=1e+02 Score=29.83 Aligned_cols=40 Identities=8% Similarity=0.037 Sum_probs=28.2
Q ss_pred ceeEEEEeecccCccccCcHH-HHHhhHHHHHHhC--CCcEEEEee
Q 006091 151 SYNIVFVTAEAAPYSKTGGLG-DVCGSLPVALAAR--GHRVMVVSP 193 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~-~~~~~La~~L~~~--GheV~Vit~ 193 (662)
+|||++|... |.. .+|.. ..+..+...|.+. ||+|.++-.
T Consensus 1 Mmkil~i~gS--pr~-~~s~s~~l~~~~~~~l~~~~~~~~v~~~dL 43 (201)
T PRK00170 1 MSKVLVIKSS--ILG-DYSQSMQLGDAFIEAYKEAHPDDEVTVRDL 43 (201)
T ss_pred CCeEEEEecC--CCC-CCcHHHHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 4899999975 421 32444 4666777888888 999998854
No 321
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=25.50 E-value=1.9e+02 Score=25.06 Aligned_cols=41 Identities=7% Similarity=0.199 Sum_probs=26.8
Q ss_pred HHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEE
Q 006091 485 LIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRG 527 (662)
Q Consensus 485 ~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~ 527 (662)
.+.+.+..+ ++.+|+++|+..+...+....+++..+.++..
T Consensus 54 ~i~~i~~~f--P~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~a 94 (100)
T PF09949_consen 54 NIERILRDF--PERKFILIGDSGQHDPEIYAEIARRFPGRILA 94 (100)
T ss_pred HHHHHHHHC--CCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEE
Confidence 333444333 57799999996555566777777777766553
No 322
>PRK13233 nifH nitrogenase reductase; Reviewed
Probab=25.25 E-value=83 Score=32.29 Aligned_cols=27 Identities=22% Similarity=0.427 Sum_probs=22.1
Q ss_pred cCcHHH--HHhhHHHHHHh-CCCcEEEEee
Q 006091 167 TGGLGD--VCGSLPVALAA-RGHRVMVVSP 193 (662)
Q Consensus 167 ~GG~~~--~~~~La~~L~~-~GheV~Vit~ 193 (662)
.||+|+ .+.+||.+|++ +|++|-||=.
T Consensus 10 KGGVGKTT~a~nLA~~La~~~G~rvLliD~ 39 (275)
T PRK13233 10 KGGIGKSTTTQNTAAAMAYFHDKKVFIHGC 39 (275)
T ss_pred CCCCcHHHHHHHHHHHHHHhcCCeEEEecc
Confidence 477776 57899999997 6999999843
No 323
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=25.09 E-value=6.8e+02 Score=24.77 Aligned_cols=101 Identities=15% Similarity=0.065 Sum_probs=55.2
Q ss_pred CccCHHHHHHHHHhccC-CCeEEEEEeCCChhhHHHHHHHHhhcCCcEE--EEcCC--ChHHHHHHHHhcCEEEEcCCCC
Q 006091 479 YQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKDKYR--GWVGF--NVPISHRITAGCDILLMPSRFE 553 (662)
Q Consensus 479 ~~Kg~d~Ll~A~~~l~~-~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~--~~~~~--~~~~~~~ll~~aDi~v~PS~~E 553 (662)
-.|=+..|..|+.-+.. ..-++++||..+ .....+++.+......++ .|+|- ..... .-+..-|++++....
T Consensus 48 L~kT~~~L~~A~~~i~~~~~~~ILfVgTk~-~~~~~v~k~A~~~g~~~v~~RWlgG~LTN~~~-~~~~~Pdliiv~dp~- 124 (204)
T PRK04020 48 VRKTDERIRIAAKFLSRYEPEKILVVSSRQ-YGQKPVQKFAEVVGAKAITGRFIPGTLTNPSL-KGYIEPDVVVVTDPR- 124 (204)
T ss_pred HHHHHHHHHHHHHHHHHhcCCeEEEEeCCH-HHHHHHHHHHHHhCCeeecCccCCCcCcCcch-hccCCCCEEEEECCc-
Confidence 34555556666554433 345688888875 344455555543322221 23331 11111 123355665555543
Q ss_pred CCcHHHHHHHHcCCcEEE-eCCcccccccc
Q 006091 554 PCGLNQLYAMRYGTIPVV-HATGGLRDTVE 582 (662)
Q Consensus 554 ~fgl~~lEAma~G~PvVa-s~~gg~~eii~ 582 (662)
.-..++.||...|+|+|+ .|+-.-++.|.
T Consensus 125 ~~~~AI~EA~kl~IP~IaivDTn~dp~~Vd 154 (204)
T PRK04020 125 GDAQAVKEAIEVGIPVVALCDTDNLTSNVD 154 (204)
T ss_pred ccHHHHHHHHHhCCCEEEEEeCCCCcccCc
Confidence 226789999999999999 46655555553
No 324
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=25.07 E-value=77 Score=32.87 Aligned_cols=32 Identities=41% Similarity=0.662 Sum_probs=24.5
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||+++.. |.+| ..++..|++.||+|++++..
T Consensus 1 m~I~IiG~--------G~~G---~~~a~~L~~~g~~V~~~~r~ 32 (304)
T PRK06522 1 MKIAILGA--------GAIG---GLFGAALAQAGHDVTLVARR 32 (304)
T ss_pred CEEEEECC--------CHHH---HHHHHHHHhCCCeEEEEECC
Confidence 78888752 5555 56788899999999999753
No 325
>PRK03767 NAD(P)H:quinone oxidoreductase; Provisional
Probab=25.06 E-value=1e+02 Score=30.08 Aligned_cols=37 Identities=8% Similarity=0.124 Sum_probs=30.5
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHh-CCCcEEEEee
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSP 193 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~-~GheV~Vit~ 193 (662)
|||++|... + .|-....+..+++.+.+ .|++|.++..
T Consensus 2 ~kilIvy~S--~---~G~T~~lA~~ia~g~~~~~G~ev~~~~l 39 (200)
T PRK03767 2 AKVLVLYYS--M---YGHIETMAEAVAEGAREVAGAEVTIKRV 39 (200)
T ss_pred CeEEEEEcC--C---CCHHHHHHHHHHHHHhhcCCcEEEEEec
Confidence 689888753 4 37788899999999998 9999999864
No 326
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=24.76 E-value=78 Score=31.42 Aligned_cols=29 Identities=34% Similarity=0.476 Sum_probs=22.8
Q ss_pred CcHHHHHhhHHHHHHhCCCcEEEEeecCC
Q 006091 168 GGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (662)
Q Consensus 168 GG~~~~~~~La~~L~~~GheV~Vit~~~~ 196 (662)
+|.|..=..|++.|++.||+|.+-+.+.+
T Consensus 7 ~GtGniG~alA~~~a~ag~eV~igs~r~~ 35 (211)
T COG2085 7 IGTGNIGSALALRLAKAGHEVIIGSSRGP 35 (211)
T ss_pred eccChHHHHHHHHHHhCCCeEEEecCCCh
Confidence 44555557899999999999999976644
No 327
>PRK06924 short chain dehydrogenase; Provisional
Probab=24.68 E-value=82 Score=31.40 Aligned_cols=33 Identities=27% Similarity=0.508 Sum_probs=23.4
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
||.++|+.- .||+| ..+++.|.++|++|.+++.
T Consensus 1 ~k~vlItGa------sggiG---~~ia~~l~~~g~~V~~~~r 33 (251)
T PRK06924 1 MRYVIITGT------SQGLG---EAIANQLLEKGTHVISISR 33 (251)
T ss_pred CcEEEEecC------CchHH---HHHHHHHHhcCCEEEEEeC
Confidence 565666531 35666 5679999999999988754
No 328
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=24.68 E-value=81 Score=33.50 Aligned_cols=32 Identities=31% Similarity=0.374 Sum_probs=25.0
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
.|||++|.. |.+| ..+|..|++.||+|+++..
T Consensus 2 ~mkI~IiG~--------G~mG---~~~A~~L~~~G~~V~~~~r 33 (341)
T PRK08229 2 MARICVLGA--------GSIG---CYLGGRLAAAGADVTLIGR 33 (341)
T ss_pred CceEEEECC--------CHHH---HHHHHHHHhcCCcEEEEec
Confidence 489998862 5555 5678889999999999864
No 329
>PRK10569 NAD(P)H-dependent FMN reductase; Provisional
Probab=24.48 E-value=1.3e+02 Score=29.42 Aligned_cols=38 Identities=11% Similarity=0.018 Sum_probs=27.0
Q ss_pred eeEEEEeecccCccccCc-HHHHHhhHHHHHHhCCCcEEEEee
Q 006091 152 YNIVFVTAEAAPYSKTGG-LGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG-~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
|||++|+.. |. .++ ........+..|.+.|++|.++-.
T Consensus 1 mkIl~I~GS--pr--~~S~t~~l~~~~~~~l~~~g~ev~~idL 39 (191)
T PRK10569 1 MRVITLAGS--PR--FPSRSSALLEYAREWLNGLGVEVYHWNL 39 (191)
T ss_pred CEEEEEEcC--CC--CCChHHHHHHHHHHHHHhCCCEEEEEEc
Confidence 899999875 42 234 344556666778889999998853
No 330
>PF13614 AAA_31: AAA domain; PDB: 2VED_B 2PH1_A 3EA0_B 3FKQ_A 3KB1_B 1ION_A 3LA6_H 3BFV_B 3CIO_D.
Probab=24.34 E-value=1.5e+02 Score=27.08 Aligned_cols=28 Identities=25% Similarity=0.364 Sum_probs=22.7
Q ss_pred cCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 167 TGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 167 ~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
..|....+.+||..|++.|+.|.+|-..
T Consensus 11 g~G~t~~a~~lA~~la~~~~~Vllid~~ 38 (157)
T PF13614_consen 11 GVGKTTLALNLAAALARKGKKVLLIDFD 38 (157)
T ss_dssp TSSHHHHHHHHHHHHHHTTT-EEEEE--
T ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEECC
Confidence 5788889999999999999998888654
No 331
>PF02635 DrsE: DsrE/DsrF-like family; InterPro: IPR003787 Four small, soluble proteins (DsrE, DsrF, DsrH and DsrC) are encoded in the dsr gene region of the phototrophic sulphur bacterium Chromatium vinosum D. The dsrAB genes encoding dissimilatory sulphite reductase are part of the gene cluster, dsrABEFHCMK. The remaining proteins that are encoded are a transmembrane protein (DsrM) with similarity to haem-b-binding polypeptides and a soluble protein (DsrK) resembling [4Fe-4S]-cluster-containing heterodisulphide reductase from methanogenic archaea. DsrE is a small soluble protein involved in intracellular sulphur reduction [].; PDB: 1L1S_A 2HYB_B 2HY5_B 2PD2_B 3MC3_A 2D1P_H 1JX7_B 2FB6_A.
Probab=24.13 E-value=1.6e+02 Score=25.37 Aligned_cols=40 Identities=28% Similarity=0.402 Sum_probs=28.6
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCC---CcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG---HRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~G---heV~Vit~~ 194 (662)
|+|+++... .|+ ..-.......++..+...| ++|.|+...
T Consensus 1 k~v~~i~~~-~p~--~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~g 43 (122)
T PF02635_consen 1 KKVFFIVTS-GPY--DDERAKIALRLANAAAAMGDYGHDVVVFFHG 43 (122)
T ss_dssp EEEEEEE-S--TT--TBSHHHHHHHHHHHHHHTTHTTSEEEEEE-G
T ss_pred CEEEEEecC-CCC--CCHHHHHHHHHHHHHHHcCCCCCcEEEEEEc
Confidence 678888764 454 2334788888999999999 999998644
No 332
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=23.86 E-value=3.7e+02 Score=26.45 Aligned_cols=30 Identities=23% Similarity=0.250 Sum_probs=24.1
Q ss_pred CccEEEeCCCCcchHHHHHHhhcCCCCCCCCCcEEEEec
Q 006091 290 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIH 328 (662)
Q Consensus 290 ~pDVVh~h~~~~~l~~~ll~~~~~~~~~~~gip~v~tiH 328 (662)
+||+|.+-.||-.+.+.++.... + -++.+|
T Consensus 79 ~~dlvvLAGyMrIL~~~fl~~~~-------g--rIlNIH 108 (200)
T COG0299 79 GPDLVVLAGYMRILGPEFLSRFE-------G--RILNIH 108 (200)
T ss_pred CCCEEEEcchHHHcCHHHHHHhh-------c--ceEecC
Confidence 79999999999998888888643 2 466778
No 333
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=23.85 E-value=70 Score=31.01 Aligned_cols=30 Identities=33% Similarity=0.400 Sum_probs=20.9
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEe
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit 192 (662)
|||+++... .+=.-+|..|++.||+|..+-
T Consensus 1 M~I~ViGlG-----------yvGl~~A~~lA~~G~~V~g~D 30 (185)
T PF03721_consen 1 MKIAVIGLG-----------YVGLPLAAALAEKGHQVIGVD 30 (185)
T ss_dssp -EEEEE--S-----------TTHHHHHHHHHHTTSEEEEE-
T ss_pred CEEEEECCC-----------cchHHHHHHHHhCCCEEEEEe
Confidence 889888643 233567899999999999984
No 334
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=23.71 E-value=85 Score=31.04 Aligned_cols=32 Identities=31% Similarity=0.420 Sum_probs=23.1
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEe
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit 192 (662)
||+++|+.- .||++ ..+++.|.++|++|.++.
T Consensus 1 ~~~~lItGa------~g~iG---~~l~~~l~~~g~~v~~~~ 32 (247)
T PRK09730 1 MAIALVTGG------SRGIG---RATALLLAQEGYTVAVNY 32 (247)
T ss_pred CCEEEEeCC------CchHH---HHHHHHHHHCCCEEEEEe
Confidence 677777631 35555 568899999999998764
No 335
>PF00205 TPP_enzyme_M: Thiamine pyrophosphate enzyme, central domain; InterPro: IPR012000 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This central domain of TPP enzymes contains a 2-fold Rossman fold. ; GO: 0000287 magnesium ion binding, 0030976 thiamine pyrophosphate binding; PDB: 1OZH_C 1OZF_B 1OZG_B 2Q29_B 2Q28_A 2Q27_B 1OVM_B 1PVD_A 1PYD_B 2VK1_C ....
Probab=23.56 E-value=2e+02 Score=25.89 Aligned_cols=28 Identities=18% Similarity=0.452 Sum_probs=20.3
Q ss_pred CcEEEEcCC-ChHHHHHHHHhcCEEEEcC
Q 006091 523 DKYRGWVGF-NVPISHRITAGCDILLMPS 550 (662)
Q Consensus 523 ~~~~~~~~~-~~~~~~~ll~~aDi~v~PS 550 (662)
..+.|..+. ......+++..||+++.--
T Consensus 57 p~~~G~~g~~~~~~~~~~l~~aDlvl~iG 85 (137)
T PF00205_consen 57 PLFLGYLGLFGSPAANEALEQADLVLAIG 85 (137)
T ss_dssp TTEEEESCGGSCHHHHHHHHHSSEEEEES
T ss_pred chhcccCCccCCHHHHHHhcCCCEEEEEC
Confidence 457777776 2445568899999998765
No 336
>PRK07308 flavodoxin; Validated
Probab=23.02 E-value=1.3e+02 Score=27.66 Aligned_cols=26 Identities=27% Similarity=0.327 Sum_probs=23.6
Q ss_pred cCcHHHHHhhHHHHHHhCCCcEEEEe
Q 006091 167 TGGLGDVCGSLPVALAARGHRVMVVS 192 (662)
Q Consensus 167 ~GG~~~~~~~La~~L~~~GheV~Vit 192 (662)
+|....++..++..|.+.|++|.+.-
T Consensus 12 tGnTe~iA~~ia~~l~~~g~~~~~~~ 37 (146)
T PRK07308 12 TGNTEEIADIVADKLRELGHDVDVDE 37 (146)
T ss_pred CchHHHHHHHHHHHHHhCCCceEEEe
Confidence 59999999999999999999998863
No 337
>PRK01372 ddl D-alanine--D-alanine ligase; Reviewed
Probab=22.97 E-value=1.2e+02 Score=31.59 Aligned_cols=42 Identities=10% Similarity=0.031 Sum_probs=30.5
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
+|||++++....|.. .=.-.....+.++|.++||+|.++...
T Consensus 4 ~~~v~~~~g~~~~~~--~~~~~s~~~i~~al~~~g~~v~~i~~~ 45 (304)
T PRK01372 4 FGKVAVLMGGTSAER--EVSLNSGAAVLAALREAGYDAHPIDPG 45 (304)
T ss_pred CcEEEEEeCCCCCCc--eEeHHhHHHHHHHHHHCCCEEEEEecC
Confidence 468999997655542 112224589999999999999998544
No 338
>PRK05693 short chain dehydrogenase; Provisional
Probab=22.88 E-value=89 Score=31.79 Aligned_cols=34 Identities=26% Similarity=0.451 Sum_probs=24.9
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
||+++|+.- +||+| ..+++.|.++|++|.+++..
T Consensus 1 mk~vlItGa------sggiG---~~la~~l~~~G~~V~~~~r~ 34 (274)
T PRK05693 1 MPVVLITGC------SSGIG---RALADAFKAAGYEVWATARK 34 (274)
T ss_pred CCEEEEecC------CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 677777742 47777 46778889999999887543
No 339
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=22.81 E-value=3.3e+02 Score=25.91 Aligned_cols=54 Identities=17% Similarity=0.239 Sum_probs=34.9
Q ss_pred EEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCc
Q 006091 471 IGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDK 524 (662)
Q Consensus 471 Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~ 524 (662)
+-.+|..++.-+.+..-+.+..+.+.+..++++|-|.|.-+.+........+..
T Consensus 73 l~i~g~~~g~~~~~~~~~i~~~I~~~~pdiv~vglG~PkQE~~~~~~~~~l~~~ 126 (171)
T cd06533 73 LKIVGYHHGYFGPEEEEEIIERINASGADILFVGLGAPKQELWIARHKDRLPVP 126 (171)
T ss_pred cEEEEecCCCCChhhHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHHHCCCC
Confidence 444555555555444444555555557889999999877788888877766444
No 340
>PF02606 LpxK: Tetraacyldisaccharide-1-P 4'-kinase; InterPro: IPR003758 Tetraacyldisaccharide 4'-kinase phosphorylates the 4'-position of a tetraacyldisaccharide 1-phosphate precursor (DS-1-P) of lipid A, but the enzyme has not yet been purified because of instability []. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS).; GO: 0005524 ATP binding, 0009029 tetraacyldisaccharide 4'-kinase activity, 0009245 lipid A biosynthetic process
Probab=22.72 E-value=89 Score=33.35 Aligned_cols=43 Identities=28% Similarity=0.315 Sum_probs=33.7
Q ss_pred ceeEEEEeecccCccccCcHHH--HHhhHHHHHHhCCCcEEEEeecCCCC
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSPRYFNG 198 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~--~~~~La~~L~~~GheV~Vit~~~~~~ 198 (662)
+..|..|.+ ...||.|+ ++..|++.|.++|+.|.|++-.|...
T Consensus 34 ~vpVIsVGN-----ltvGGTGKTP~v~~L~~~L~~~G~~~~IlSRGYg~~ 78 (326)
T PF02606_consen 34 PVPVISVGN-----LTVGGTGKTPLVIWLARLLQARGYRPAILSRGYGRK 78 (326)
T ss_pred CCcEEEEcc-----cccCCCCchHHHHHHHHHHHhcCCceEEEcCCCCCC
Confidence 455666654 23677776 89999999999999999999888653
No 341
>PRK14494 putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/FeS domain-containing protein protein; Provisional
Probab=22.71 E-value=1.3e+02 Score=30.33 Aligned_cols=37 Identities=19% Similarity=0.160 Sum_probs=31.0
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
|+|+.|+.. + ..|-.+.+..|+..|.++|+.|.++-.
T Consensus 1 m~vi~ivG~--~---gsGKTtl~~~l~~~L~~~G~~V~viK~ 37 (229)
T PRK14494 1 MRAIGVIGF--K---DSGKTTLIEKILKNLKERGYRVATAKH 37 (229)
T ss_pred CeEEEEECC--C---CChHHHHHHHHHHHHHhCCCeEEEEEe
Confidence 788777753 2 478899999999999999999999954
No 342
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=22.36 E-value=1.4e+02 Score=32.85 Aligned_cols=32 Identities=22% Similarity=0.175 Sum_probs=23.3
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||++|.... =|+..| ..|.+.||+|.++-.-
T Consensus 1 mkiaiigqs~------fg~~vy-----~~lrk~gheiv~vfti 32 (881)
T KOG2452|consen 1 MKIAVIGQSL------FGQEVY-----CHLRKEGHEVVGVFTV 32 (881)
T ss_pred CeeEEechhh------hhHHHH-----HHHHhcCceEEEEEEe
Confidence 8999887642 234544 6799999999888544
No 343
>TIGR03010 sulf_tusC_dsrF sulfur relay protein TusC/DsrF. The three proteins TusB, TusC, and TusD form a heterohexamer responsible for a sulfur relay reaction. In large numbers of proteobacterial species, this complex acts on a Cys-derived persulfide moiety, delivered by the cysteine desulfurase IscS to TusA, then to TusBCD. The activated sulfur group is then transferred to TusE (DsrC), then by MnmA (TrmU) for modification of an anticodon nucleotide in tRNAs for Glu, Lys, and Gln. The sulfur relay complex TusBCD is also found, under the designation DsrEFH, in phototrophic and chemotrophic sulfur bacteria, such as Chromatium vinosum. In these organisms, it seems the primary purpose is related to sulfur flux, such as oxidation from sulfide to molecular sulfur to sulfate.
Probab=22.02 E-value=1.5e+02 Score=26.26 Aligned_cols=39 Identities=21% Similarity=0.112 Sum_probs=28.5
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
||+|+... .|| .+-.+.-..+++.++++.+++|.|+-..
T Consensus 1 kil~i~~~-~Py--g~~~~~e~l~~al~~aa~~~eV~vff~~ 39 (116)
T TIGR03010 1 KLAFVFRQ-APH--GTASGREGLDALLAASAFDEDIGVFFID 39 (116)
T ss_pred CEEEEEcC-CCC--CcchHHHHHHHHHHHHhccCCeEEEEec
Confidence 57888775 676 2225555667789999999999998654
No 344
>cd02033 BchX Chlorophyllide reductase converts chlorophylls into bacteriochlorophylls by reducing the chlorin B-ring. This family contains the X subunit of this three-subunit enzyme. Sequence and structure similarity between bchX, protochlorophyllide reductase L subunit (bchL and chlL) and nitrogenase Fe protein (nifH gene) suggest their functional similarity. Members of the BchX family serve as the unique electron donors to their respective catalytic subunits (bchN-bchB, bchY-bchZ and nitrogenase component 1). Mechanistically, they hydrolyze ATP and transfer electrons through a Fe4-S4 cluster.
Probab=21.94 E-value=1.8e+02 Score=31.09 Aligned_cols=40 Identities=18% Similarity=0.214 Sum_probs=29.2
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
++.||+.|+. .+ .-|-.+.+.+||.+|+++|+.|.+|-..
T Consensus 29 ~~~~ii~v~g--kg---G~GKSt~a~nLa~~la~~g~rVllid~D 68 (329)
T cd02033 29 KKTQIIAIYG--KG---GIGKSFTLANLSYMMAQQGKRVLLIGCD 68 (329)
T ss_pred CCCeEEEEEC--CC---CCCHHHHHHHHHHHHHHCCCcEEEEEee
Confidence 4567776663 12 2445567899999999999999999644
No 345
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=21.94 E-value=1.1e+02 Score=30.64 Aligned_cols=25 Identities=28% Similarity=0.611 Sum_probs=19.0
Q ss_pred cCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 167 TGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 167 ~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
+||+| ..+++.|.++|++|.+++..
T Consensus 9 sg~iG---~~la~~l~~~G~~V~~~~r~ 33 (248)
T PRK10538 9 TAGFG---ECITRRFIQQGHKVIATGRR 33 (248)
T ss_pred CchHH---HHHHHHHHHCCCEEEEEECC
Confidence 46666 45788899999999887643
No 346
>PLN03007 UDP-glucosyltransferase family protein
Probab=21.89 E-value=1.2e+02 Score=34.22 Aligned_cols=131 Identities=17% Similarity=0.021 Sum_probs=67.2
Q ss_pred CCCEEEEEecCCC--ccCHHHHHHHHHhccCCCeEEEEE-eCCC---h----hhHHHHHHHHhhcCCcEEEEcCCChHHH
Q 006091 467 DCPLIGFIGRLDY--QKGIDLIRLAAPEILADDIQFVML-GSGD---P----QFESWMRDTEATYKDKYRGWVGFNVPIS 536 (662)
Q Consensus 467 ~~~~Il~vGrl~~--~Kg~d~Ll~A~~~l~~~d~~lviv-G~g~---~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 536 (662)
...+++..|.... .+.+..++++++.+ +.+|+++ +... . ..+.+.+... ..+..+.+|++ +
T Consensus 285 ~svvyvsfGS~~~~~~~~~~~~~~~l~~~---~~~flw~~~~~~~~~~~~~~lp~~~~~r~~-~~g~~v~~w~P--Q--- 355 (482)
T PLN03007 285 DSVIYLSFGSVASFKNEQLFEIAAGLEGS---GQNFIWVVRKNENQGEKEEWLPEGFEERTK-GKGLIIRGWAP--Q--- 355 (482)
T ss_pred CceEEEeecCCcCCCHHHHHHHHHHHHHC---CCCEEEEEecCCcccchhhcCCHHHHHHhc-cCCEEEecCCC--H---
Confidence 3355666787643 33445555555444 5566654 3210 0 0011111111 12233445663 2
Q ss_pred HHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCC----cccccccccccccccCCCCccceEEE----------CC
Q 006091 537 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT----GGLRDTVENFNPFAREGSGEGTGWSF----------LP 602 (662)
Q Consensus 537 ~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~----gg~~eii~~~~~~~~~~~~~~~G~l~----------~~ 602 (662)
..+|+.+++-++-+.- | -++++||+++|+|+|+-.. .-....+.+ .-+.|+-+ ..
T Consensus 356 ~~iL~h~~v~~fvtH~-G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~---------~~~~G~~~~~~~~~~~~~~~ 424 (482)
T PLN03007 356 VLILDHQATGGFVTHC-G-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQ---------VLRTGVSVGAKKLVKVKGDF 424 (482)
T ss_pred HHHhccCccceeeecC-c-chHHHHHHHcCCCeeeccchhhhhhhHHHHHH---------hhcceeEeccccccccccCc
Confidence 2578888764333321 2 3589999999999999542 222222211 01233322 22
Q ss_pred CCHHHHHHHHHHHHH
Q 006091 603 LSEESMLTALRFAIR 617 (662)
Q Consensus 603 ~d~~~la~aI~~~l~ 617 (662)
-+.++++++|++++.
T Consensus 425 ~~~~~l~~av~~~m~ 439 (482)
T PLN03007 425 ISREKVEKAVREVIV 439 (482)
T ss_pred ccHHHHHHHHHHHhc
Confidence 468899999999885
No 347
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=21.80 E-value=95 Score=32.64 Aligned_cols=25 Identities=32% Similarity=0.542 Sum_probs=18.4
Q ss_pred CcHHHHHhhHHHHHHhCCCcEEEEe
Q 006091 168 GGLGDVCGSLPVALAARGHRVMVVS 192 (662)
Q Consensus 168 GG~~~~~~~La~~L~~~GheV~Vit 192 (662)
||.+-.-..+++.|.++||+|.++.
T Consensus 7 GatG~iG~~l~~~L~~~g~~V~~~~ 31 (338)
T PRK10675 7 GGSGYIGSHTCVQLLQNGHDVVILD 31 (338)
T ss_pred CCCChHHHHHHHHHHHCCCeEEEEe
Confidence 3334444668899999999999875
No 348
>PLN02712 arogenate dehydrogenase
Probab=21.62 E-value=1.3e+02 Score=35.43 Aligned_cols=44 Identities=18% Similarity=0.285 Sum_probs=30.5
Q ss_pred ccccccccccCCceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 139 DVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 139 ~~~~~~~~~~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
.+..+++....++|||++|. .|.+-..++++|.+.||+|.++..
T Consensus 40 ~~~~~~~~~~~~~~kIgIIG-----------~G~mG~slA~~L~~~G~~V~~~dr 83 (667)
T PLN02712 40 QPLPNSNPDNTTQLKIAIIG-----------FGNYGQFLAKTLISQGHTVLAHSR 83 (667)
T ss_pred CCCCCCCCccCCCCEEEEEc-----------cCHHHHHHHHHHHHCCCEEEEEeC
Confidence 34444444455689999985 234446789999999999888754
No 349
>PRK05568 flavodoxin; Provisional
Probab=21.58 E-value=1.6e+02 Score=26.59 Aligned_cols=27 Identities=15% Similarity=0.234 Sum_probs=24.4
Q ss_pred cCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 167 TGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 167 ~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
+|.....+..+++.+.+.|++|.++-.
T Consensus 12 ~GnT~~~a~~i~~~~~~~g~~v~~~~~ 38 (142)
T PRK05568 12 TGNTEAMANLIAEGAKENGAEVKLLNV 38 (142)
T ss_pred CchHHHHHHHHHHHHHHCCCeEEEEEC
Confidence 699999999999999999999998843
No 350
>PRK13886 conjugal transfer protein TraL; Provisional
Probab=21.57 E-value=1.2e+02 Score=30.86 Aligned_cols=37 Identities=19% Similarity=0.447 Sum_probs=27.8
Q ss_pred eeEEEEeecccCccccCcHHH--HHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~--~~~~La~~L~~~GheV~Vit~~ 194 (662)
++|.++... .||+|. .+..||.+|+++|.+|.++-..
T Consensus 2 ~~i~~i~~~------KGGvGKSt~a~~la~~l~~~g~~vl~iD~D 40 (241)
T PRK13886 2 AKIHMVLQG------KGGVGKSFIAATIAQYKASKGQKPLCIDTD 40 (241)
T ss_pred CeEEEEecC------CCCCcHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 567777642 466665 6788999999999999888544
No 351
>PLN02208 glycosyltransferase family protein
Probab=21.41 E-value=1.3e+02 Score=33.45 Aligned_cols=39 Identities=23% Similarity=0.215 Sum_probs=29.4
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.+++|++|.. | .-|=-.=+.+||+.|+.+|++|+++++.
T Consensus 3 ~~~hvv~~P~---p---aqGHi~P~l~LAk~La~~G~~VT~vtt~ 41 (442)
T PLN02208 3 PKFHAFMFPW---F---AFGHMIPFLHLANKLAEKGHRVTFLLPK 41 (442)
T ss_pred CCCEEEEecC---c---cccHHHHHHHHHHHHHhCCCEEEEEecc
Confidence 3467887742 3 2345556789999999999999999854
No 352
>COG0655 WrbA Multimeric flavodoxin WrbA [General function prediction only]
Probab=21.35 E-value=1.5e+02 Score=29.04 Aligned_cols=40 Identities=15% Similarity=0.252 Sum_probs=33.9
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||+.|+.. |+. .|-....+...++++.+.|.+|.++...
T Consensus 1 mki~~I~gs--~r~-~G~t~~l~~~~~~g~~~~G~E~~~i~v~ 40 (207)
T COG0655 1 MKILGINGS--PRS-NGNTAKLAEAVLEGAEEAGAEVEIIRLP 40 (207)
T ss_pred CeeeEEEec--CCC-CCcHHHHHHHHHHHHHHcCCEEEEEEec
Confidence 788888875 443 6889999999999999999999999754
No 353
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
Probab=21.27 E-value=1.2e+03 Score=26.23 Aligned_cols=110 Identities=12% Similarity=0.143 Sum_probs=64.6
Q ss_pred EEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHh--cCEEEEcCCC-CCCcHHHHHHHHc---CCcEEE-
Q 006091 499 QFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAG--CDILLMPSRF-EPCGLNQLYAMRY---GTIPVV- 571 (662)
Q Consensus 499 ~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~--aDi~v~PS~~-E~fgl~~lEAma~---G~PvVa- 571 (662)
++++|-+.. .....+..+-....-.+...- +.......+.. .|++++--.. +.-|+.+++.+.. ++|||.
T Consensus 6 ~iLvVDDd~-~ir~~l~~~L~~~G~~v~~a~--~~~~al~~i~~~~~~lvl~Di~mp~~~Gl~ll~~i~~~~~~~pVI~~ 82 (464)
T COG2204 6 RILVVDDDP-DIRELLEQALELAGYEVVTAE--SAEEALEALSESPFDLVLLDIRMPGMDGLELLKEIKSRDPDLPVIVM 82 (464)
T ss_pred CEEEEeCCH-HHHHHHHHHHHHcCCeEEEeC--CHHHHHHHHhcCCCCEEEEecCCCCCchHHHHHHHHhhCCCCCEEEE
Confidence 355555543 333333333222222233222 33333344443 3555554443 6778888887776 799988
Q ss_pred eCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHH
Q 006091 572 HATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 618 (662)
Q Consensus 572 s~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~ 618 (662)
|..|.+...+.-. ..|..-|+..|.+++.+...++++++.
T Consensus 83 Tg~g~i~~AV~A~-------k~GA~Dfl~KP~~~~~L~~~v~ral~~ 122 (464)
T COG2204 83 TGHGDIDTAVEAL-------RLGAFDFLEKPFDLDRLLAIVERALEL 122 (464)
T ss_pred eCCCCHHHHHHHH-------hcCcceeeeCCCCHHHHHHHHHHHHHH
Confidence 6666655444321 016778899999999999999999873
No 354
>PRK09004 FMN-binding protein MioC; Provisional
Probab=21.16 E-value=1.5e+02 Score=27.42 Aligned_cols=26 Identities=23% Similarity=0.286 Sum_probs=23.8
Q ss_pred cCcHHHHHhhHHHHHHhCCCcEEEEe
Q 006091 167 TGGLGDVCGSLPVALAARGHRVMVVS 192 (662)
Q Consensus 167 ~GG~~~~~~~La~~L~~~GheV~Vit 192 (662)
+|-.+.++..+++.|.++|++|.++.
T Consensus 12 tGnae~~A~~l~~~~~~~g~~~~~~~ 37 (146)
T PRK09004 12 LGGAEYVADHLAEKLEEAGFSTETLH 37 (146)
T ss_pred chHHHHHHHHHHHHHHHcCCceEEec
Confidence 78899999999999999999999864
No 355
>PRK10427 putative PTS system fructose-like transporter subunit EIIB; Provisional
Probab=21.13 E-value=1.6e+02 Score=26.18 Aligned_cols=39 Identities=18% Similarity=0.035 Sum_probs=29.7
Q ss_pred ceeEEEEeecccCccccCcHHHHH--hhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVC--GSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~--~~La~~L~~~GheV~Vit~~ 194 (662)
.|||+.|+. .| .|-...|+ ..|.++-.++||++.|=+-.
T Consensus 2 ~mkivaVta--cp---~GiAht~lAAeaL~kAA~~~G~~i~VE~qg 42 (114)
T PRK10427 2 MAYLVAVTA--CV---SGVAHTYMAAERLEKLCQLEKWGVKIETQG 42 (114)
T ss_pred CceEEEEee--CC---CcHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 389999986 36 46666666 67777788899999987644
No 356
>TIGR03815 CpaE_hom_Actino helicase/secretion neighborhood CpaE-like protein. Members of this protein family belong to the MinD/ParA family of P-loop NTPases, and in particular show homology to the CpaE family of pilus assembly proteins (see PubMed:12370432). Nearly all members are found, not only in a gene context consistent with pilus biogenesis or a pilus-like secretion apparatus, but also near a DEAD/DEAH-box helicase, suggesting an involvement in DNA transfer activity. The model describes a clade restricted to the Actinobacteria.
Probab=21.11 E-value=1.3e+02 Score=31.87 Aligned_cols=39 Identities=28% Similarity=0.428 Sum_probs=27.8
Q ss_pred CceeEEEEeecccCccccCcHHH--HHhhHHHHHHhCCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~--~~~~La~~L~~~GheV~Vit~~ 194 (662)
+.+||+-|... .||+|+ .+.+||.+|+++|.+|.+|=..
T Consensus 91 ~~~~vIav~~~------KGGvGkTT~a~nLA~~la~~g~~VlLvD~D 131 (322)
T TIGR03815 91 ARGVVVAVIGG------RGGAGASTLAAALALAAARHGLRTLLVDAD 131 (322)
T ss_pred CCceEEEEEcC------CCCCcHHHHHHHHHHHHHhcCCCEEEEecC
Confidence 34665555542 466655 5689999999999999998544
No 357
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=21.04 E-value=1.2e+02 Score=28.72 Aligned_cols=41 Identities=20% Similarity=0.186 Sum_probs=29.0
Q ss_pred HHHHhcCEEEEcCC--C--CCCcH--HHHHHHHcCCcEEEeCCcccc
Q 006091 538 RITAGCDILLMPSR--F--EPCGL--NQLYAMRYGTIPVVHATGGLR 578 (662)
Q Consensus 538 ~ll~~aDi~v~PS~--~--E~fgl--~~lEAma~G~PvVas~~gg~~ 578 (662)
.+-..+|++|+.-. . |+-|+ .+.+|++.|+|||+.-....-
T Consensus 89 al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~V~~~~l 135 (159)
T PF10649_consen 89 ALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTAVPPRNL 135 (159)
T ss_pred HHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEEECHHHH
Confidence 34456999998864 2 45454 679999999999997544333
No 358
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=21.03 E-value=7.3e+02 Score=25.11 Aligned_cols=34 Identities=18% Similarity=0.302 Sum_probs=27.5
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
-.||+++++ | .......+...|.+.|.+|.-+..
T Consensus 120 ~~RIalvTP----Y-----~~~v~~~~~~~l~~~G~eV~~~~~ 153 (239)
T TIGR02990 120 VRRISLLTP----Y-----TPETSRPMAQYFAVRGFEIVNFTC 153 (239)
T ss_pred CCEEEEECC----C-----cHHHHHHHHHHHHhCCcEEeeeec
Confidence 478999985 4 356678889999999999998854
No 359
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=20.81 E-value=77 Score=29.84 Aligned_cols=25 Identities=32% Similarity=0.339 Sum_probs=21.0
Q ss_pred HHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 170 LGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 170 ~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.|.+....++.|.+.|++|+||++.
T Consensus 21 GG~va~rka~~Ll~~ga~V~VIsp~ 45 (157)
T PRK06719 21 GGKIAYRKASGLKDTGAFVTVVSPE 45 (157)
T ss_pred CCHHHHHHHHHHHhCCCEEEEEcCc
Confidence 3566788999999999999999654
No 360
>PRK13231 nitrogenase reductase-like protein; Reviewed
Probab=20.55 E-value=65 Score=32.88 Aligned_cols=34 Identities=21% Similarity=0.441 Sum_probs=25.0
Q ss_pred eeEEEEeecccCccccCcHHH--HHhhHHHHHHhCCCcEEEEee
Q 006091 152 YNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~--~~~~La~~L~~~GheV~Vit~ 193 (662)
|||+-|.. .||+|+ .+.+||.+|++.| +|.+|=.
T Consensus 2 ~~~iav~~-------KGGvGKTT~a~nLA~~La~~G-rVLliD~ 37 (264)
T PRK13231 2 MKKIAIYG-------KGGIGKSTTVSNMAAAYSNDH-RVLVIGC 37 (264)
T ss_pred ceEEEEEC-------CCCCcHHHHHHHHhcccCCCC-EEEEEeE
Confidence 56555543 366665 6789999999999 9888843
No 361
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=20.36 E-value=1.5e+02 Score=28.69 Aligned_cols=35 Identities=26% Similarity=0.431 Sum_probs=25.8
Q ss_pred eeEEEEeecccCccccCcH-HHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGL-GDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~-~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
+||++... |+. ...+.++.+.|.+.|++|.|+.+.
T Consensus 2 k~Ill~vt--------Gsiaa~~~~~li~~L~~~g~~V~vv~T~ 37 (182)
T PRK07313 2 KNILLAVS--------GSIAAYKAADLTSQLTKRGYQVTVLMTK 37 (182)
T ss_pred CEEEEEEe--------ChHHHHHHHHHHHHHHHCCCEEEEEECh
Confidence 45666553 443 345789999999999999998754
No 362
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=20.34 E-value=1.1e+02 Score=33.39 Aligned_cols=33 Identities=24% Similarity=0.375 Sum_probs=26.7
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
.+||++| ||.|.+=..++..|.+.||+|.++..
T Consensus 98 ~~~I~Ii----------GG~GlmG~slA~~l~~~G~~V~~~d~ 130 (374)
T PRK11199 98 LRPVVIV----------GGKGQLGRLFAKMLTLSGYQVRILEQ 130 (374)
T ss_pred cceEEEE----------cCCChhhHHHHHHHHHCCCeEEEeCC
Confidence 3778866 56677778899999999999999853
No 363
>PRK08655 prephenate dehydrogenase; Provisional
Probab=20.34 E-value=1e+02 Score=34.30 Aligned_cols=33 Identities=24% Similarity=0.419 Sum_probs=24.2
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||++| ||.|..-..++..|.+.||+|.++...
T Consensus 1 MkI~II----------GG~G~mG~slA~~L~~~G~~V~v~~r~ 33 (437)
T PRK08655 1 MKISII----------GGTGGLGKWFARFLKEKGFEVIVTGRD 33 (437)
T ss_pred CEEEEE----------ecCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 677776 334444567889999999999888643
No 364
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=20.28 E-value=1.1e+02 Score=32.16 Aligned_cols=26 Identities=35% Similarity=0.516 Sum_probs=22.0
Q ss_pred cCcHHHHHhhHHHHHHhCCCcEEEEe
Q 006091 167 TGGLGDVCGSLPVALAARGHRVMVVS 192 (662)
Q Consensus 167 ~GG~~~~~~~La~~L~~~GheV~Vit 192 (662)
+||.|-.=...+.+|.+.||+|.|+-
T Consensus 6 tGGAGYIGSHtv~~Ll~~G~~vvV~D 31 (329)
T COG1087 6 TGGAGYIGSHTVRQLLKTGHEVVVLD 31 (329)
T ss_pred ecCcchhHHHHHHHHHHCCCeEEEEe
Confidence 37777777778899999999999984
No 365
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=20.20 E-value=85 Score=32.55 Aligned_cols=31 Identities=32% Similarity=0.483 Sum_probs=27.3
Q ss_pred cCcHHHHHhhHHHHHHhCCCcEEEEeecCCC
Q 006091 167 TGGLGDVCGSLPVALAARGHRVMVVSPRYFN 197 (662)
Q Consensus 167 ~GG~~~~~~~La~~L~~~GheV~Vit~~~~~ 197 (662)
+||.|-.=..|...|.+.||+|+|++-+.+.
T Consensus 4 TGgTGlIG~~L~~~L~~~gh~v~iltR~~~~ 34 (297)
T COG1090 4 TGGTGLIGRALTARLRKGGHQVTILTRRPPK 34 (297)
T ss_pred eccccchhHHHHHHHHhCCCeEEEEEcCCcc
Confidence 6888888899999999999999999977544
No 366
>PF07015 VirC1: VirC1 protein; InterPro: IPR009744 This family consists of several bacterial VirC1 proteins. In Agrobacterium tumefaciens, a cis-active 24-base-pair sequence adjacent to the right border of the T-DNA, called overdrive, stimulates tumour formation by increasing the level of T-DNA processing. It is thought that the virC operon, which enhances T-DNA processing probably, does so because the VirC1 protein interacts with overdrive. It has now been shown that the virC1 gene product binds to overdrive but not to the right border of T-DNA [].
Probab=20.20 E-value=1.2e+02 Score=30.57 Aligned_cols=28 Identities=39% Similarity=0.629 Sum_probs=22.5
Q ss_pred cCcHHH--HHhhHHHHHHhCCCcEEEEeec
Q 006091 167 TGGLGD--VCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 167 ~GG~~~--~~~~La~~L~~~GheV~Vit~~ 194 (662)
.||.|+ .+..||.+|+++|-.|.+|=..
T Consensus 10 KGGaGKTT~~~~LAs~la~~G~~V~lIDaD 39 (231)
T PF07015_consen 10 KGGAGKTTAAMALASELAARGARVALIDAD 39 (231)
T ss_pred CCCCcHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 477665 6678899999999999999543
No 367
>PRK07102 short chain dehydrogenase; Provisional
Probab=20.03 E-value=1.2e+02 Score=30.21 Aligned_cols=25 Identities=20% Similarity=0.278 Sum_probs=19.0
Q ss_pred cCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 167 TGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 167 ~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
+||++ ..+++.|.++|++|.++...
T Consensus 10 s~giG---~~~a~~l~~~G~~Vi~~~r~ 34 (243)
T PRK07102 10 TSDIA---RACARRYAAAGARLYLAARD 34 (243)
T ss_pred CcHHH---HHHHHHHHhcCCEEEEEeCC
Confidence 35555 67888999999999888543
Done!