Query 006091
Match_columns 662
No_of_seqs 209 out of 3349
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 15:41:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006091.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006091hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vue_A GBSS-I, granule-bound s 100.0 8.9E-65 3E-69 572.4 45.4 486 146-655 4-512 (536)
2 1rzu_A Glycogen synthase 1; gl 100.0 1.2E-49 4E-54 443.7 39.1 469 152-660 1-481 (485)
3 2qzs_A Glycogen synthase; glyc 100.0 4.5E-49 1.5E-53 439.0 40.2 467 152-658 1-480 (485)
4 3fro_A GLGA glycogen synthase; 100.0 3.4E-46 1.2E-50 408.0 42.3 424 150-657 1-433 (439)
5 3c48_A Predicted glycosyltrans 100.0 1.1E-40 3.8E-45 365.7 36.2 397 148-660 17-431 (438)
6 2r60_A Glycosyl transferase, g 100.0 2.6E-40 8.9E-45 369.9 34.8 406 150-659 6-464 (499)
7 3s28_A Sucrose synthase 1; gly 100.0 1.6E-39 5.4E-44 378.8 34.8 432 150-654 277-769 (816)
8 3okp_A GDP-mannose-dependent a 100.0 1.4E-38 4.9E-43 342.9 34.4 365 150-657 3-382 (394)
9 2jjm_A Glycosyl transferase, g 100.0 6.2E-38 2.1E-42 339.5 38.4 373 151-658 13-389 (394)
10 2iw1_A Lipopolysaccharide core 100.0 2E-38 6.9E-43 339.6 22.8 365 152-656 1-373 (374)
11 2x6q_A Trehalose-synthase TRET 100.0 4.6E-37 1.6E-41 335.1 32.0 363 150-655 39-415 (416)
12 2gek_A Phosphatidylinositol ma 100.0 5.3E-36 1.8E-40 324.4 31.9 365 148-659 17-388 (406)
13 3oy2_A Glycosyltransferase B73 100.0 4.1E-36 1.4E-40 327.0 25.9 230 379-658 128-394 (413)
14 2iuy_A Avigt4, glycosyltransfe 100.0 5.3E-35 1.8E-39 310.3 26.0 318 151-660 3-341 (342)
15 3nb0_A Glycogen [starch] synth 100.0 2E-34 6.9E-39 322.1 31.2 447 157-656 33-635 (725)
16 2x0d_A WSAF; GT4 family, trans 100.0 4E-32 1.4E-36 296.9 14.9 359 149-656 44-411 (413)
17 2hy7_A Glucuronosyltransferase 100.0 4E-30 1.4E-34 280.6 13.8 202 374-656 170-381 (406)
18 1f0k_A MURG, UDP-N-acetylgluco 100.0 5.9E-29 2E-33 265.6 21.2 340 151-656 6-359 (364)
19 1uqt_A Alpha, alpha-trehalose- 100.0 7.2E-27 2.5E-31 259.3 26.7 295 290-654 123-454 (482)
20 2vsy_A XCC0866; transferase, g 99.9 2E-26 6.7E-31 261.5 27.8 212 382-658 328-563 (568)
21 1l5w_A Maltodextrin phosphoryl 99.9 6.6E-26 2.3E-30 257.2 29.3 351 290-656 299-732 (796)
22 2c4m_A Glycogen phosphorylase; 99.9 3.5E-26 1.2E-30 259.5 26.7 471 166-656 112-721 (796)
23 1vgv_A UDP-N-acetylglucosamine 99.9 4.8E-27 1.6E-31 252.7 14.4 283 290-658 86-380 (384)
24 3beo_A UDP-N-acetylglucosamine 99.9 4.5E-26 1.5E-30 244.1 21.8 217 381-652 149-374 (375)
25 3t5t_A Putative glycosyltransf 99.9 5.4E-24 1.8E-28 234.3 27.5 286 291-654 150-473 (496)
26 2gj4_A Glycogen phosphorylase, 99.9 1.2E-24 4E-29 247.8 16.7 352 290-657 320-757 (824)
27 2bfw_A GLGA glycogen synthase; 99.9 1.3E-23 4.6E-28 204.9 21.4 184 419-633 1-192 (200)
28 3qhp_A Type 1 capsular polysac 99.9 1.7E-22 5.9E-27 191.2 19.1 159 468-646 2-166 (166)
29 1v4v_A UDP-N-acetylglucosamine 99.9 5.2E-23 1.8E-27 220.8 16.5 217 380-656 144-366 (376)
30 2xci_A KDO-transferase, 3-deox 99.8 2.2E-20 7.5E-25 201.2 19.9 198 376-634 147-357 (374)
31 2f9f_A First mannosyl transfer 99.8 1.4E-20 4.8E-25 180.7 16.4 137 466-617 21-161 (177)
32 3otg_A CALG1; calicheamicin, T 99.8 2E-17 6.8E-22 179.3 23.3 159 468-653 243-409 (412)
33 3rhz_A GTF3, nucleotide sugar 99.7 3.8E-17 1.3E-21 173.1 18.7 243 290-646 74-328 (339)
34 3dzc_A UDP-N-acetylglucosamine 99.7 2E-16 6.7E-21 171.6 22.3 221 381-651 165-394 (396)
35 3ot5_A UDP-N-acetylglucosamine 99.7 1E-16 3.4E-21 174.3 18.6 220 381-656 168-393 (403)
36 3s2u_A UDP-N-acetylglucosamine 99.7 1.2E-14 4E-19 155.9 25.5 162 466-651 178-355 (365)
37 2iyf_A OLED, oleandomycin glyc 99.7 1.3E-14 4.4E-19 158.4 25.8 160 467-654 232-401 (430)
38 4fzr_A SSFS6; structural genom 99.6 8.7E-16 3E-20 166.0 13.8 152 467-648 227-396 (398)
39 3ia7_A CALG4; glycosysltransfe 99.6 5.8E-13 2E-17 143.3 29.8 158 467-654 231-400 (402)
40 3oti_A CALG3; calicheamicin, T 99.5 7E-14 2.4E-18 151.1 17.6 153 468-651 233-396 (398)
41 3tsa_A SPNG, NDP-rhamnosyltran 99.5 7E-14 2.4E-18 150.5 16.5 158 468-652 219-388 (391)
42 3rsc_A CALG2; TDP, enediyne, s 99.5 5E-12 1.7E-16 137.0 30.7 156 468-653 248-414 (415)
43 2p6p_A Glycosyl transferase; X 99.5 1.4E-11 4.7E-16 132.2 29.5 153 468-651 211-378 (384)
44 4hwg_A UDP-N-acetylglucosamine 99.4 5.9E-13 2E-17 143.5 9.8 218 381-650 145-373 (385)
45 2yjn_A ERYCIII, glycosyltransf 99.2 1.2E-09 4.1E-14 119.6 21.8 154 469-652 269-435 (441)
46 1ygp_A Yeast glycogen phosphor 99.2 3E-09 1E-13 120.9 25.1 348 290-649 359-870 (879)
47 2iya_A OLEI, oleandomycin glyc 99.2 3.8E-08 1.3E-12 106.8 32.8 157 468-652 256-421 (424)
48 3h4t_A Glycosyltransferase GTF 99.0 2.2E-08 7.6E-13 108.3 23.5 153 467-652 221-382 (404)
49 4amg_A Snogd; transferase, pol 98.9 8.1E-09 2.8E-13 110.8 14.3 151 469-650 239-398 (400)
50 1rrv_A Glycosyltransferase GTF 98.7 9.6E-07 3.3E-11 95.5 22.5 133 468-633 238-380 (416)
51 3q3e_A HMW1C-like glycosyltran 98.7 1E-07 3.5E-12 106.7 14.9 183 459-656 432-625 (631)
52 2o6l_A UDP-glucuronosyltransfe 98.6 1.6E-07 5.6E-12 88.4 11.9 131 467-630 21-162 (170)
53 1iir_A Glycosyltransferase GTF 98.0 2E-05 6.9E-10 85.1 12.2 155 468-657 239-401 (415)
54 4gyw_A UDP-N-acetylglucosamine 97.2 0.01 3.5E-07 68.7 19.9 179 457-656 514-707 (723)
55 3hbm_A UDP-sugar hydrolase; PS 96.1 0.017 5.9E-07 58.8 9.5 93 469-573 159-251 (282)
56 1psw_A ADP-heptose LPS heptosy 95.6 0.21 7.2E-06 51.6 15.6 111 453-572 167-286 (348)
57 3hbf_A Flavonoid 3-O-glucosylt 94.7 0.23 7.9E-06 53.9 12.8 132 467-617 272-413 (454)
58 2c1x_A UDP-glucose flavonoid 3 93.2 0.53 1.8E-05 51.0 12.2 127 469-617 273-411 (456)
59 3l7i_A Teichoic acid biosynthe 93.2 0.44 1.5E-05 55.0 12.2 195 379-617 475-682 (729)
60 2acv_A Triterpene UDP-glucosyl 93.0 0.56 1.9E-05 51.0 12.1 130 469-617 278-424 (463)
61 2pq6_A UDP-glucuronosyl/UDP-gl 92.8 1.2 4E-05 48.6 14.3 129 469-617 297-438 (482)
62 2vch_A Hydroquinone glucosyltr 92.5 0.7 2.4E-05 50.5 12.0 68 538-617 351-428 (480)
63 3tov_A Glycosyl transferase fa 92.4 0.68 2.3E-05 48.2 11.4 111 455-574 174-288 (349)
64 2jzc_A UDP-N-acetylglucosamine 90.4 0.26 9E-06 48.1 5.2 68 530-615 120-196 (224)
65 2gt1_A Lipopolysaccharide hept 88.9 0.84 2.9E-05 46.7 8.0 97 468-572 179-278 (326)
66 1iir_A Glycosyltransferase GTF 72.7 2.6 8.9E-05 44.5 4.3 37 152-194 1-37 (415)
67 2d1p_A TUSD, hypothetical UPF0 68.9 7 0.00024 34.9 5.6 40 150-192 11-51 (140)
68 2hy5_A Putative sulfurtransfer 68.3 6.8 0.00023 34.2 5.4 40 152-194 1-41 (130)
69 1xv5_A AGT, DNA alpha-glucosyl 67.4 85 0.0029 29.7 32.7 154 470-633 199-378 (401)
70 1wcv_1 SOJ, segregation protei 65.8 5.5 0.00019 39.0 4.8 41 148-194 2-44 (257)
71 3kjh_A CO dehydrogenase/acetyl 65.4 4.8 0.00016 38.8 4.2 36 152-195 1-38 (254)
72 3auf_A Glycinamide ribonucleot 64.5 17 0.00057 35.3 7.8 42 144-194 15-58 (229)
73 4b4o_A Epimerase family protei 64.3 4.9 0.00017 40.1 4.1 33 152-194 1-33 (298)
74 4gi5_A Quinone reductase; prot 63.6 7.3 0.00025 39.1 5.2 40 150-193 21-61 (280)
75 3to5_A CHEY homolog; alpha(5)b 59.7 87 0.003 27.2 12.2 117 492-617 7-132 (134)
76 1kjn_A MTH0777; hypotethical p 58.3 13 0.00046 33.2 5.2 43 147-193 2-44 (157)
77 4f3y_A DHPR, dihydrodipicolina 58.2 12 0.00041 37.3 5.7 63 536-603 67-129 (272)
78 3heb_A Response regulator rece 54.7 84 0.0029 26.9 10.3 109 497-618 4-135 (152)
79 3ty2_A 5'-nucleotidase SURE; s 54.6 9.2 0.00031 37.9 4.0 40 150-197 10-49 (261)
80 3tqr_A Phosphoribosylglycinami 54.5 38 0.0013 32.4 8.2 38 149-195 3-41 (215)
81 3f6r_A Flavodoxin; FMN binding 53.0 15 0.0005 32.4 4.8 38 152-194 2-39 (148)
82 3jte_A Response regulator rece 52.4 1E+02 0.0036 25.8 13.8 107 498-617 4-122 (143)
83 4dad_A Putative pilus assembly 52.2 49 0.0017 28.2 8.2 67 541-617 66-140 (146)
84 3hly_A Flavodoxin-like domain; 51.8 16 0.00055 33.0 5.0 38 152-194 1-38 (161)
85 3kht_A Response regulator; PSI 51.6 1.1E+02 0.0037 25.8 12.5 111 497-619 5-129 (144)
86 3hzh_A Chemotaxis response reg 50.6 1.2E+02 0.0042 26.1 11.4 107 498-616 37-155 (157)
87 1jx7_A Hypothetical protein YC 49.9 18 0.00063 30.3 4.8 40 152-194 2-43 (117)
88 2qsj_A DNA-binding response re 49.2 1.2E+02 0.0042 25.8 10.5 110 497-617 3-123 (154)
89 3mc3_A DSRE/DSRF-like family p 49.0 20 0.00067 31.4 4.9 42 150-194 14-55 (134)
90 2zay_A Response regulator rece 48.6 1.2E+02 0.0042 25.5 12.1 110 497-619 8-129 (147)
91 3gt7_A Sensor protein; structu 48.3 1.3E+02 0.0045 25.8 11.8 110 497-619 7-128 (154)
92 3nhm_A Response regulator; pro 47.9 1.2E+02 0.004 25.0 12.0 108 497-618 4-122 (133)
93 2phj_A 5'-nucleotidase SURE; S 47.4 14 0.00047 36.4 3.9 39 151-197 1-39 (251)
94 3pg5_A Uncharacterized protein 47.0 15 0.00051 38.1 4.4 37 152-194 1-39 (361)
95 3n53_A Response regulator rece 47.0 1.3E+02 0.0043 25.2 11.4 106 498-617 4-121 (140)
96 2d1p_B TUSC, hypothetical UPF0 46.9 24 0.00083 30.1 5.1 38 153-193 3-40 (119)
97 2pq6_A UDP-glucuronosyl/UDP-gl 46.6 15 0.00051 39.6 4.5 38 151-194 8-45 (482)
98 1cp2_A CP2, nitrogenase iron p 46.5 15 0.00051 35.9 4.1 36 152-194 1-38 (269)
99 2vch_A Hydroquinone glucosyltr 45.6 13 0.00043 40.3 3.7 40 150-195 5-45 (480)
100 1rcu_A Conserved hypothetical 45.4 97 0.0033 29.0 9.4 129 481-614 42-191 (195)
101 3ijp_A DHPR, dihydrodipicolina 45.1 18 0.00061 36.4 4.4 64 536-604 82-145 (288)
102 4e7p_A Response regulator; DNA 45.0 1.4E+02 0.0049 25.3 11.5 66 542-617 66-139 (150)
103 2hy5_B Intracellular sulfur ox 44.5 22 0.00076 31.3 4.5 40 151-193 4-44 (136)
104 2ywr_A Phosphoribosylglycinami 44.2 52 0.0018 31.4 7.4 34 152-194 2-37 (216)
105 1i3c_A Response regulator RCP1 43.6 1.5E+02 0.0052 25.1 12.3 109 497-617 8-136 (149)
106 1f4p_A Flavodoxin; electron tr 42.7 22 0.00075 31.1 4.3 38 152-194 1-38 (147)
107 4dzz_A Plasmid partitioning pr 42.7 27 0.00091 32.2 5.1 37 152-194 1-39 (206)
108 3h5i_A Response regulator/sens 42.6 1.5E+02 0.0051 24.8 15.1 109 497-618 5-124 (140)
109 2j48_A Two-component sensor ki 42.4 1.2E+02 0.0042 23.9 8.8 105 499-616 3-116 (119)
110 1k66_A Phytochrome response re 42.3 1.5E+02 0.0051 24.7 10.6 110 497-618 6-138 (149)
111 3mcu_A Dipicolinate synthase, 41.9 22 0.00074 33.9 4.3 36 151-194 5-42 (207)
112 3b6i_A Flavoprotein WRBA; flav 41.7 25 0.00086 32.4 4.7 39 151-194 1-40 (198)
113 1ydg_A Trp repressor binding p 41.5 28 0.00096 32.6 5.1 40 150-194 5-44 (211)
114 3ilh_A Two component response 41.2 1.5E+02 0.0053 24.6 11.0 109 497-617 9-138 (146)
115 3tem_A Ribosyldihydronicotinam 40.9 23 0.00078 34.2 4.4 40 151-194 1-41 (228)
116 2e6c_A 5'-nucleotidase SURE; S 40.4 20 0.00068 35.1 3.8 38 152-197 1-38 (244)
117 3ew7_A LMO0794 protein; Q8Y8U8 40.1 22 0.00076 33.1 4.1 33 152-194 1-33 (221)
118 2zki_A 199AA long hypothetical 39.9 24 0.00082 32.6 4.3 38 151-194 4-41 (199)
119 3nbm_A PTS system, lactose-spe 39.7 48 0.0016 28.0 5.6 43 149-197 4-46 (108)
120 2a5l_A Trp repressor binding p 39.7 31 0.001 31.8 5.0 38 151-193 5-42 (200)
121 3grc_A Sensor protein, kinase; 39.6 1.6E+02 0.0056 24.4 12.1 109 497-618 6-127 (140)
122 3lqk_A Dipicolinate synthase s 39.5 23 0.00077 33.6 3.9 36 151-194 7-44 (201)
123 1j9j_A Stationary phase surviV 39.1 22 0.00075 34.9 3.9 38 152-197 1-38 (247)
124 3k9g_A PF-32 protein; ssgcid, 38.9 26 0.00088 34.2 4.5 42 146-194 21-64 (267)
125 3igf_A ALL4481 protein; two-do 38.7 28 0.00096 36.4 4.9 36 151-193 1-38 (374)
126 3h2s_A Putative NADH-flavin re 38.7 24 0.00082 33.0 4.1 33 152-194 1-33 (224)
127 2fb6_A Conserved hypothetical 38.5 20 0.00069 30.7 3.2 39 152-194 8-48 (117)
128 3l4b_C TRKA K+ channel protien 38.3 29 0.00099 32.7 4.6 25 170-194 8-32 (218)
129 3ug7_A Arsenical pump-driving 38.2 29 0.00099 35.7 4.9 40 150-195 23-64 (349)
130 3fwy_A Light-independent proto 37.9 25 0.00084 35.8 4.3 37 151-194 47-85 (314)
131 3lua_A Response regulator rece 37.7 1.3E+02 0.0043 25.2 8.5 108 497-617 4-126 (140)
132 2qv0_A Protein MRKE; structura 37.2 1.8E+02 0.0062 24.2 13.7 111 497-618 9-127 (143)
133 3av3_A Phosphoribosylglycinami 37.1 82 0.0028 29.9 7.6 35 151-194 3-39 (212)
134 2fzv_A Putative arsenical resi 37.0 38 0.0013 33.8 5.4 41 149-193 56-97 (279)
135 3cnb_A DNA-binding response re 36.6 1.8E+02 0.0062 24.0 13.8 110 497-617 8-129 (143)
136 1l5x_A SurviVal protein E; str 36.4 24 0.00083 35.2 3.8 38 152-197 1-38 (280)
137 2ark_A Flavodoxin; FMN, struct 36.1 35 0.0012 31.4 4.7 39 151-194 4-43 (188)
138 1lss_A TRK system potassium up 36.0 34 0.0011 29.1 4.3 33 151-194 4-36 (140)
139 1k68_A Phytochrome response re 36.0 1.8E+02 0.0061 23.8 12.6 110 498-618 3-131 (140)
140 2v4n_A Multifunctional protein 35.9 27 0.00092 34.4 4.0 39 151-197 1-39 (254)
141 3kcn_A Adenylate cyclase homol 35.8 2E+02 0.0068 24.3 13.5 108 497-618 4-123 (151)
142 2vzf_A NADH-dependent FMN redu 35.4 35 0.0012 31.6 4.7 40 151-193 2-42 (197)
143 3eul_A Possible nitrate/nitrit 35.4 2E+02 0.0069 24.3 12.8 110 497-617 15-134 (152)
144 3iqw_A Tail-anchored protein t 35.4 22 0.00077 36.4 3.5 38 150-194 14-53 (334)
145 3cz5_A Two-component response 34.7 2E+02 0.0069 24.3 9.5 109 497-617 5-124 (153)
146 3bfv_A CAPA1, CAPB2, membrane 34.7 47 0.0016 32.7 5.6 42 149-194 79-120 (271)
147 3e8x_A Putative NAD-dependent 34.6 28 0.00097 33.0 3.9 35 150-194 20-54 (236)
148 1d4a_A DT-diaphorase, quinone 34.4 41 0.0014 33.3 5.2 40 151-194 2-42 (273)
149 1t2a_A GDP-mannose 4,6 dehydra 34.0 29 0.00098 35.6 4.1 25 167-194 33-57 (375)
150 3f2v_A General stress protein 33.5 22 0.00077 33.3 2.9 38 151-193 1-38 (192)
151 3cg4_A Response regulator rece 33.2 2.1E+02 0.0071 23.7 14.3 109 497-618 7-127 (142)
152 3r0j_A Possible two component 33.1 3.1E+02 0.011 25.7 12.7 112 497-618 23-141 (250)
153 4g65_A TRK system potassium up 33.0 16 0.00053 39.5 1.8 66 540-617 298-366 (461)
154 2dkn_A 3-alpha-hydroxysteroid 32.9 33 0.0011 32.7 4.1 34 152-194 1-34 (255)
155 3cwq_A Para family chromosome 32.5 31 0.0011 32.4 3.8 35 152-194 1-37 (209)
156 3hdg_A Uncharacterized protein 32.3 2.1E+02 0.0072 23.5 10.8 108 497-617 7-124 (137)
157 3q9l_A Septum site-determining 32.2 50 0.0017 31.6 5.4 37 152-194 2-40 (260)
158 2hna_A Protein MIOC, flavodoxi 32.2 40 0.0014 29.5 4.3 36 152-192 2-37 (147)
159 2ph1_A Nucleotide-binding prot 32.2 51 0.0017 32.0 5.4 39 150-194 16-56 (262)
160 3fgn_A Dethiobiotin synthetase 32.0 61 0.0021 31.7 5.9 44 146-193 20-63 (251)
161 1fjh_A 3alpha-hydroxysteroid d 32.0 35 0.0012 32.8 4.1 34 152-194 1-34 (257)
162 3fni_A Putative diflavin flavo 31.8 61 0.0021 29.0 5.5 39 151-194 4-42 (159)
163 3h1g_A Chemotaxis protein CHEY 31.7 2.1E+02 0.0072 23.3 12.7 109 497-617 5-126 (129)
164 3dqp_A Oxidoreductase YLBE; al 31.5 30 0.001 32.4 3.4 33 152-194 1-33 (219)
165 1sqs_A Conserved hypothetical 31.3 41 0.0014 32.4 4.5 41 151-194 1-42 (242)
166 1t0i_A YLR011WP; FMN binding p 30.6 58 0.002 29.8 5.2 39 152-193 1-45 (191)
167 4eg0_A D-alanine--D-alanine li 30.5 30 0.001 34.8 3.5 41 150-192 12-52 (317)
168 1g3q_A MIND ATPase, cell divis 30.3 59 0.002 30.6 5.4 39 152-194 2-40 (237)
169 3of5_A Dethiobiotin synthetase 30.2 64 0.0022 30.9 5.6 39 151-193 3-41 (228)
170 3qvo_A NMRA family protein; st 30.1 30 0.001 32.9 3.2 36 150-194 21-57 (236)
171 2qyt_A 2-dehydropantoate 2-red 30.0 25 0.00084 35.2 2.7 36 146-192 3-44 (317)
172 3guy_A Short-chain dehydrogena 29.9 34 0.0012 32.3 3.6 34 152-194 1-34 (230)
173 1jay_A Coenzyme F420H2:NADP+ o 29.8 40 0.0014 31.4 4.0 32 152-193 1-32 (212)
174 1ykg_A SIR-FP, sulfite reducta 29.8 31 0.0011 31.1 3.1 38 151-193 9-46 (167)
175 3end_A Light-independent proto 29.8 58 0.002 32.4 5.5 40 150-194 39-78 (307)
176 1t5b_A Acyl carrier protein ph 29.8 48 0.0016 30.4 4.5 42 151-194 1-44 (201)
177 1zmt_A Haloalcohol dehalogenas 29.7 29 0.001 33.5 3.1 33 152-193 1-33 (254)
178 3f6c_A Positive transcription 29.7 2.3E+02 0.0078 23.1 11.2 108 498-617 2-119 (134)
179 3t6k_A Response regulator rece 29.6 2.4E+02 0.0082 23.3 12.7 107 498-617 5-123 (136)
180 1tvm_A PTS system, galactitol- 29.6 78 0.0027 26.7 5.4 43 147-195 17-60 (113)
181 3ea0_A ATPase, para family; al 29.5 51 0.0018 31.2 4.8 39 150-194 2-43 (245)
182 3cio_A ETK, tyrosine-protein k 29.1 64 0.0022 32.3 5.6 42 149-194 101-142 (299)
183 3r6w_A FMN-dependent NADH-azor 29.0 46 0.0016 31.2 4.3 41 151-194 1-44 (212)
184 2f5x_A BUGD; periplasmic bindi 29.0 4.4E+02 0.015 26.2 14.3 156 469-634 112-277 (312)
185 1hyq_A MIND, cell division inh 28.7 65 0.0022 31.0 5.5 39 152-194 2-40 (263)
186 3io3_A DEHA2D07832P; chaperone 28.7 41 0.0014 34.7 4.1 41 149-194 15-57 (348)
187 2woo_A ATPase GET3; tail-ancho 28.7 43 0.0015 34.0 4.3 37 151-194 18-56 (329)
188 2woj_A ATPase GET3; tail-ancho 28.4 44 0.0015 34.5 4.3 39 150-195 16-58 (354)
189 3da8_A Probable 5'-phosphoribo 28.4 98 0.0033 29.5 6.4 38 148-194 9-47 (215)
190 2q62_A ARSH; alpha/beta, flavo 28.3 58 0.002 31.7 5.0 40 150-193 33-73 (247)
191 3r6d_A NAD-dependent epimerase 28.3 51 0.0017 30.7 4.5 35 151-194 4-39 (221)
192 1jkx_A GART;, phosphoribosylgl 28.0 1.5E+02 0.0051 28.0 7.7 34 152-194 1-36 (212)
193 2r85_A PURP protein PF1517; AT 27.5 42 0.0014 33.6 3.9 32 151-194 2-33 (334)
194 3rqi_A Response regulator prot 27.5 3.1E+02 0.011 24.2 9.7 109 497-618 7-125 (184)
195 2afh_E Nitrogenase iron protei 27.2 67 0.0023 31.6 5.3 38 152-194 2-39 (289)
196 3orf_A Dihydropteridine reduct 27.0 48 0.0016 31.9 4.1 36 150-194 20-55 (251)
197 1p2f_A Response regulator; DRR 27.0 2E+02 0.0067 26.3 8.4 68 541-618 42-117 (220)
198 1sbz_A Probable aromatic acid 26.7 61 0.0021 30.5 4.6 35 152-194 1-37 (197)
199 1vl8_A Gluconate 5-dehydrogena 26.7 52 0.0018 32.0 4.4 34 151-193 20-53 (267)
200 3klo_A Transcriptional regulat 26.5 1.9E+02 0.0065 26.7 8.3 114 497-617 7-128 (225)
201 1jbe_A Chemotaxis protein CHEY 26.4 2.5E+02 0.0087 22.6 11.7 109 497-617 4-124 (128)
202 3l77_A Short-chain alcohol deh 26.2 51 0.0017 31.2 4.1 33 152-193 2-34 (235)
203 3gk3_A Acetoacetyl-COA reducta 26.2 41 0.0014 32.8 3.4 34 151-193 24-57 (269)
204 3rpe_A MDAB, modulator of drug 26.2 73 0.0025 30.4 5.1 43 150-194 24-69 (218)
205 3i83_A 2-dehydropantoate 2-red 26.1 45 0.0015 33.6 3.9 33 151-194 2-34 (320)
206 2pln_A HP1043, response regula 25.8 2.8E+02 0.0094 22.8 12.1 63 542-617 62-132 (137)
207 3s5p_A Ribose 5-phosphate isom 25.8 71 0.0024 29.1 4.6 41 146-194 16-56 (166)
208 3ic5_A Putative saccharopine d 25.8 61 0.0021 26.4 4.1 33 151-194 5-38 (118)
209 3la6_A Tyrosine-protein kinase 25.8 75 0.0026 31.5 5.4 41 150-194 90-130 (286)
210 1sny_A Sniffer CG10964-PA; alp 25.7 41 0.0014 32.4 3.4 41 145-194 14-57 (267)
211 1iow_A DD-ligase, DDLB, D-ALA\ 25.7 40 0.0014 33.3 3.3 39 151-194 2-43 (306)
212 2hpv_A FMN-dependent NADH-azor 25.6 59 0.002 30.2 4.4 41 151-193 1-44 (208)
213 1hdo_A Biliverdin IX beta redu 25.4 57 0.0019 29.7 4.1 33 152-194 4-36 (206)
214 2r25_B Osmosensing histidine p 25.2 2.8E+02 0.0097 22.7 12.5 65 543-617 53-126 (133)
215 3qxc_A Dethiobiotin synthetase 25.2 89 0.0031 30.3 5.7 40 150-193 19-58 (242)
216 2x4g_A Nucleoside-diphosphate- 25.0 56 0.0019 32.7 4.3 34 151-194 13-46 (342)
217 3zqu_A Probable aromatic acid 24.9 76 0.0026 30.1 4.9 36 151-194 4-40 (209)
218 2ew2_A 2-dehydropantoate 2-red 24.8 47 0.0016 32.9 3.7 32 151-193 3-34 (316)
219 1z82_A Glycerol-3-phosphate de 24.8 48 0.0016 33.6 3.8 33 150-193 13-45 (335)
220 4id9_A Short-chain dehydrogena 24.8 45 0.0015 33.6 3.6 37 148-194 16-52 (347)
221 1bvy_F Protein (cytochrome P45 24.8 64 0.0022 30.0 4.3 39 151-194 21-59 (191)
222 4hb9_A Similarities with proba 24.6 46 0.0016 34.1 3.7 30 151-191 1-30 (412)
223 2acv_A Triterpene UDP-glucosyl 24.5 52 0.0018 35.2 4.1 40 150-195 8-49 (463)
224 3k96_A Glycerol-3-phosphate de 24.4 46 0.0016 34.3 3.6 34 149-193 27-60 (356)
225 3b2n_A Uncharacterized protein 24.2 2.9E+02 0.01 22.5 13.1 108 498-617 4-122 (133)
226 1a04_A Nitrate/nitrite respons 24.0 4E+02 0.014 24.0 11.4 108 498-617 6-124 (215)
227 3hn2_A 2-dehydropantoate 2-red 23.8 51 0.0017 33.0 3.7 33 151-194 2-34 (312)
228 1ys7_A Transcriptional regulat 23.6 4.2E+02 0.014 24.1 13.5 112 497-618 7-125 (233)
229 3cu5_A Two component transcrip 23.6 3.2E+02 0.011 22.7 11.9 66 542-617 49-122 (141)
230 3kto_A Response regulator rece 23.3 3.1E+02 0.011 22.5 8.8 67 542-618 50-126 (136)
231 3oh8_A Nucleoside-diphosphate 23.2 59 0.002 35.2 4.3 34 151-194 147-180 (516)
232 3g17_A Similar to 2-dehydropan 22.9 44 0.0015 33.2 3.0 33 151-194 2-34 (294)
233 3dfu_A Uncharacterized protein 22.9 29 0.001 33.6 1.6 33 150-193 5-37 (232)
234 3lcm_A SMU.1420, putative oxid 22.9 61 0.0021 30.1 3.8 38 152-194 1-39 (196)
235 2xj4_A MIPZ; replication, cell 22.8 84 0.0029 30.9 5.1 37 152-194 4-42 (286)
236 3k31_A Enoyl-(acyl-carrier-pro 22.8 82 0.0028 31.1 5.0 34 152-194 30-65 (296)
237 3ego_A Probable 2-dehydropanto 22.8 61 0.0021 32.5 4.1 32 151-194 2-33 (307)
238 4huj_A Uncharacterized protein 22.6 60 0.002 30.7 3.8 32 150-192 22-53 (220)
239 3ko8_A NAD-dependent epimerase 22.4 61 0.0021 31.9 4.0 33 152-194 1-33 (312)
240 1qkk_A DCTD, C4-dicarboxylate 22.2 3.5E+02 0.012 22.7 13.2 107 498-617 4-120 (155)
241 3eag_A UDP-N-acetylmuramate:L- 22.2 74 0.0025 32.2 4.6 33 151-193 4-36 (326)
242 1gsa_A Glutathione synthetase; 22.1 77 0.0026 31.1 4.7 40 152-194 2-41 (316)
243 3p0r_A Azoreductase; structura 22.1 76 0.0026 29.8 4.4 42 151-194 4-48 (211)
244 3fwz_A Inner membrane protein 22.1 48 0.0016 28.7 2.7 34 150-194 6-39 (140)
245 1ihu_A Arsenical pump-driving 22.0 66 0.0022 35.5 4.5 41 150-195 6-46 (589)
246 1ks9_A KPA reductase;, 2-dehyd 22.0 59 0.002 31.7 3.7 32 152-194 1-32 (291)
247 2gk4_A Conserved hypothetical 21.7 69 0.0024 31.0 4.0 25 167-194 28-52 (232)
248 3g0o_A 3-hydroxyisobutyrate de 21.6 60 0.0021 32.3 3.7 32 150-192 6-37 (303)
249 3d7l_A LIN1944 protein; APC893 21.6 63 0.0021 29.5 3.6 34 150-194 2-35 (202)
250 3doj_A AT3G25530, dehydrogenas 21.5 67 0.0023 32.2 4.1 33 150-193 20-52 (310)
251 1dbw_A Transcriptional regulat 21.2 3.2E+02 0.011 21.9 13.5 108 497-617 3-120 (126)
252 3fkq_A NTRC-like two-domain pr 21.1 95 0.0032 32.0 5.2 40 149-194 140-181 (373)
253 1uan_A Hypothetical protein TT 20.8 1.1E+02 0.0036 29.3 5.2 38 151-194 1-38 (227)
254 2pk3_A GDP-6-deoxy-D-LYXO-4-he 20.7 71 0.0024 31.5 4.1 35 151-194 11-45 (321)
255 1id1_A Putative potassium chan 20.6 54 0.0018 28.8 2.8 24 171-194 12-35 (153)
256 3hdv_A Response regulator; PSI 20.6 3.5E+02 0.012 22.0 11.6 108 497-617 7-126 (136)
257 3dm5_A SRP54, signal recogniti 20.5 3.6E+02 0.012 28.5 9.7 78 564-651 264-341 (443)
258 3dff_A Teicoplanin pseudoaglyc 20.5 97 0.0033 30.5 4.9 39 150-194 6-44 (273)
259 3zq6_A Putative arsenical pump 20.4 1.1E+02 0.0039 30.7 5.5 27 169-195 26-52 (324)
260 2c20_A UDP-glucose 4-epimerase 20.3 73 0.0025 31.6 4.1 25 167-194 10-34 (330)
261 3i4f_A 3-oxoacyl-[acyl-carrier 20.3 68 0.0023 30.9 3.7 36 150-194 5-40 (264)
262 2qxy_A Response regulator; reg 20.3 3.6E+02 0.012 22.1 10.5 107 497-617 4-120 (142)
263 3ruf_A WBGU; rossmann fold, UD 20.3 41 0.0014 33.9 2.1 35 150-194 24-58 (351)
264 1orr_A CDP-tyvelose-2-epimeras 20.2 73 0.0025 31.8 4.1 24 167-193 10-33 (347)
265 3ez2_A Plasmid partition prote 20.1 79 0.0027 32.8 4.4 39 150-194 106-152 (398)
266 3dhn_A NAD-dependent epimerase 20.1 79 0.0027 29.4 4.0 34 151-194 4-37 (227)
267 1f0y_A HCDH, L-3-hydroxyacyl-C 20.1 75 0.0026 31.6 4.1 37 146-193 10-46 (302)
268 3opy_A 6-phosphofructo-1-kinas 20.0 1.3E+02 0.0045 35.2 6.4 87 101-192 160-247 (989)
269 2qr3_A Two-component system re 20.0 3.6E+02 0.012 22.0 11.2 107 498-617 4-125 (140)
No 1
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=100.00 E-value=8.9e-65 Score=572.38 Aligned_cols=486 Identities=41% Similarity=0.689 Sum_probs=397.1
Q ss_pred cccCCceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceE
Q 006091 146 AQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQE 225 (662)
Q Consensus 146 ~~~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 225 (662)
...+..|||+||++|++|+.++||++.++..|+++|+++||+|.||+|.|+.... ..+......+.+.++...
T Consensus 4 ~~~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~-------~~~~~~~~~~~~~~~~~~ 76 (536)
T 3vue_A 4 HHHHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKD-------AWDTSVVAEIKVADRYER 76 (536)
T ss_dssp ----CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTT-------CEEEEEEEEEEETTEEEE
T ss_pred ccCCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhh-------hcccceEEEEEecCceEE
Confidence 4566789999999999999999999999999999999999999999999976432 223334456667777778
Q ss_pred EEEEEEeeCCceEEEEeCCCCCCC------CCCCCCCC-CCCCchhHHHHHHHHHHhhhccccCCC-----CCCCCCccE
Q 006091 226 IAFFHEYREGVDWVFVDHPSYHRP------GNPYGDIN-GAFGDNQFRYTLLCYAACEAPLVLPLG-----GFTYGEKCI 293 (662)
Q Consensus 226 ~~~~~~~~~gv~v~~i~~~~~~~~------~~~y~~~~-~~~~~~~~~~~~~~~a~~~~~~~~~~~-----~f~~~~pDV 293 (662)
+.++....+|+++++++++.|..+ ..+|++.. .+|.|+..+|..|+++++++...+.+. ....+.+||
T Consensus 77 ~~~~~~~~~gv~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddI 156 (536)
T 3vue_A 77 VRFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVV 156 (536)
T ss_dssp EEEEECEETTEEEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEE
T ss_pred EEEEEEEECCceEEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCEE
Confidence 888888899999999999887654 34566543 478999999999999998876554321 122346789
Q ss_pred EEeCCCCcchHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhh
Q 006091 294 FLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAV 373 (662)
Q Consensus 294 Vh~h~~~~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (662)
+|||+|++++++.+++......+.+.++|+|+|+|++.+++.++...+...+++..+....... .......+...+
T Consensus 157 iH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 232 (536)
T 3vue_A 157 FVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFI----DGYDTPVEGRKI 232 (536)
T ss_dssp EEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEE----ETTTSTTCEEEE
T ss_pred EEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhh----hcccccccccch
Confidence 9999999999999999888766677899999999999999999888887777766554322111 111122345668
Q ss_pred hHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccc-cchhHHh
Q 006091 374 NVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDD-LSGKVQC 452 (662)
Q Consensus 374 ~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~-~~~~~~~ 452 (662)
++++.++..||.|++||+.+++++.+.. +.|+.-....+..++.+|+||||++.|.|..+..+..++.... +.+|..+
T Consensus 233 n~~k~~i~~ad~v~tVS~~~a~ei~~~~-~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~ 311 (536)
T 3vue_A 233 NWMKAGILEADRVLTVSPYYAEELISGI-ARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALN 311 (536)
T ss_dssp EHHHHHHHHCSEEEESCHHHHHHHHTTC-CCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHH
T ss_pred hHHHHHHHhccEEEEcCHHHhhhhhccc-ccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHH
Confidence 9999999999999999999999987642 2222222234567899999999999999999888888887655 5789999
Q ss_pred HHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCC
Q 006091 453 KIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFN 532 (662)
Q Consensus 453 k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 532 (662)
|..+++++|++.+++.|+|+|+||+.++||++.|++|++++.+++++|+++|.|++.....++........++.....++
T Consensus 312 k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~ 391 (536)
T 3vue_A 312 KEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFN 391 (536)
T ss_dssp HHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCC
T ss_pred HHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEecc
Confidence 99999999999888999999999999999999999999999888999999999987777777777777777888788788
Q ss_pred hHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceE----------EECC
Q 006091 533 VPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGW----------SFLP 602 (662)
Q Consensus 533 ~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~----------l~~~ 602 (662)
.++...+|+.||++|+||++|+||++++|||+||+|||+|++||++|+|.+ +.||+ +|++
T Consensus 392 ~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~d----------g~~G~~~~~~~~~g~l~~~ 461 (536)
T 3vue_A 392 APLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIE----------GKTGFHMGRLSVDCKVVEP 461 (536)
T ss_dssp HHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCB----------TTTEEECCCCCSCTTCCCH
T ss_pred HHHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEEcCCCCchheeeC----------CCCccccccCCCceeEECC
Confidence 888889999999999999999999999999999999999999999999999 88888 6778
Q ss_pred CCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Q 006091 603 LSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWAS 655 (662)
Q Consensus 603 ~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy~~~~ 655 (662)
.|+++|+++|.+++..+ +++.|++++++++.++|||++++++|+++|+++.
T Consensus 462 ~d~~~la~ai~ral~~~--~~~~~~~~~~~am~~~fSW~~~A~~y~~ly~~L~ 512 (536)
T 3vue_A 462 SDVKKVAATLKRAIKVV--GTPAYEEMVRNCMNQDLSWKGPAKNWENVLLGLG 512 (536)
T ss_dssp HHHHHHHHHHHHHHHHT--TSHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhc--CcHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Confidence 88999999999999866 3456899999999999999999999999999863
No 2
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=100.00 E-value=1.2e-49 Score=443.69 Aligned_cols=469 Identities=36% Similarity=0.585 Sum_probs=341.1
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEE
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 231 (662)
|||++|+.+++|+...||+++++.+|+++|+++||+|+|+|+.++... ..+. +...........+ ........
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~---~~~~---~~~~~~~~~~~~~-~~~~~~~~ 73 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVK---AAVT---DPVKCFEFTDLLG-EKADLLEV 73 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHH---HHCC---SCEEEEEESCSSS-CCEEEEEE
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEeccccccc---cccc---ccceeEEEEEecC-CeEEEEEE
Confidence 899999999988645799999999999999999999999998742100 0000 0000000000000 01222334
Q ss_pred eeCCceEEEEeCCCCCC-CCCCCCCC-CCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHH
Q 006091 232 YREGVDWVFVDHPSYHR-PGNPYGDI-NGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 309 (662)
Q Consensus 232 ~~~gv~v~~i~~~~~~~-~~~~y~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~ 309 (662)
..+|+++++++.+.+.. ...+|+.. ..+|.++..++..+...+.+..+.+ ....+|||||+|++..++++.+++
T Consensus 74 ~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~DiIh~~~~~~~~~~~~~~ 149 (485)
T 1rzu_A 74 QHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGV----LPGWRPDMVHAHDWQAAMTPVYMR 149 (485)
T ss_dssp EETTEEEEEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTC----SSSCCCSEEEEEHHHHTTHHHHHH
T ss_pred EecCceEEEEeChHHhCCCccccCCcccccccchHHHHHHHHHHHHHHHHHh----ccCCCCCEEEecccchhHHHHHHh
Confidence 45899999987543221 11133211 1235566667766766655544322 012379999999988777777766
Q ss_pred hhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEec
Q 006091 310 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 389 (662)
Q Consensus 310 ~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~v 389 (662)
.... .++|+|+|+|+..+++.++...+..++++..++..... .+.....+++.++..+|.++++
T Consensus 150 ~~~~-----~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~ad~vi~~ 213 (485)
T 1rzu_A 150 YAET-----PEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGI-----------EYYNDVSFLKGGLQTATALSTV 213 (485)
T ss_dssp HSSS-----CCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTT-----------EETTEEEHHHHHHHHCSEEEES
T ss_pred hccc-----CCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccc-----------cccccccHHHHHHhhcCEEEec
Confidence 5411 47999999999865554444434444444332211000 0112235778889999999999
Q ss_pred CcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCC-C
Q 006091 390 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPD-C 468 (662)
Q Consensus 390 S~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~-~ 468 (662)
|+.+++.+.+..++.++...++.+..++.+||||||.+.|.+.....+..+|..+++.++..++..+++++|++ ++ .
T Consensus 214 S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~ 291 (485)
T 1rzu_A 214 SPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRID--DDGS 291 (485)
T ss_dssp CHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCC--CSSS
T ss_pred CHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcCCC--CCCC
Confidence 99999887532122222223344568999999999999998876665666777777888888899999999998 43 6
Q ss_pred CEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEEE
Q 006091 469 PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLM 548 (662)
Q Consensus 469 ~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~ 548 (662)
++|+|+||+.+.||++.+++|++.+.+++++|+|+|+|++.+.+.++.+......++..+.+++.+.+..+|+.||++|+
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv~v~ 371 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIII 371 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEEEE
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHHhcCCEEEE
Confidence 79999999999999999999999997779999999999755566666666555556666788877777799999999999
Q ss_pred cCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCc---------cceEEECCCCHHHHHHHHHHHHHHh
Q 006091 549 PSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGE---------GTGWSFLPLSEESMLTALRFAIRTY 619 (662)
Q Consensus 549 PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~---------~~G~l~~~~d~~~la~aI~~~l~~~ 619 (662)
||.+|+||++++|||+||+|||+++.||++|++.+ + .+|+++++.|+++++++|..++..+
T Consensus 372 pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~----------~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~ 441 (485)
T 1rzu_A 372 PSRFEPCGLTQLYALRYGCIPVVARTGGLADTVID----------ANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYY 441 (485)
T ss_dssp CCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCB----------CCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHH
T ss_pred CcccCCCCHHHHHHHHCCCCEEEeCCCChhheecc----------cccccccccCCcceEeCCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999998 6 8999999999999999999998421
Q ss_pred hhCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhCCCC
Q 006091 620 REHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDPPY 660 (662)
Q Consensus 620 ~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy~~~~~~~~~ 660 (662)
+|++.++++++++..++|+|++++++|+++|++++...+.
T Consensus 442 -~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~~~~~~~~ 481 (485)
T 1rzu_A 442 -HDPKLWTQMQKLGMKSDVSWEKSAGLYAALYSQLISKGHH 481 (485)
T ss_dssp -TCHHHHHHHHHHHHTCCCBHHHHHHHHHHHHHHHTC----
T ss_pred -CCHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhhCCCCC
Confidence 3889999999998888999999999999999999876553
No 3
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=100.00 E-value=4.5e-49 Score=439.02 Aligned_cols=467 Identities=34% Similarity=0.583 Sum_probs=335.1
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEE
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 231 (662)
|||++|+.+++|+...||+++++.+|+++|+++||+|+|+|+.++... ..+. +..........+. ...+...
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~---~~~~---~~~~~~~~~~~~~--~~~~~~~ 72 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIR---RGVT---DAQVVSRRDTFAG--HITLLFG 72 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHH---HHCT---TCEEEEEECCTTC--CEEEEEE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCccccc---cccc---cceeEEEecccCC--cEEEEEE
Confidence 899999999888645799999999999999999999999998642100 0000 0000000000000 1122233
Q ss_pred eeCCceEEEEeCCCCCCCCC-CCCCC-CCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHH
Q 006091 232 YREGVDWVFVDHPSYHRPGN-PYGDI-NGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 309 (662)
Q Consensus 232 ~~~gv~v~~i~~~~~~~~~~-~y~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~ 309 (662)
..+|+++++++.+.+..+.. +|+.. ..+|.++..++..+...+.+.++.+.. ..+|||||+|++..++++.+++
T Consensus 73 ~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Divh~~~~~~~~~~~~~~ 148 (485)
T 2qzs_A 73 HYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDP----FWRPDVVHAHDWHAGLAPAYLA 148 (485)
T ss_dssp EETTEEEEEEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSST----TCCCSEEEEETGGGTTHHHHHH
T ss_pred EECCcEEEEEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhcc----CCCCCEEEeeccchhHHHHHHh
Confidence 35799999987543222111 33221 113456666666666665555433210 1279999999988887777766
Q ss_pred hhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEec
Q 006091 310 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 389 (662)
Q Consensus 310 ~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~v 389 (662)
.+. .++|+|+|+|+..+++.++...+..++++..++..... .+.....+++.++..+|.++++
T Consensus 149 ~~~------~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~ad~vi~~ 211 (485)
T 2qzs_A 149 ARG------RPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGL-----------EFNGQISFLKAGLYYADHITAV 211 (485)
T ss_dssp HTT------CSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTT-----------EETTEEEHHHHHHHHCSEEEES
T ss_pred hcc------CCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccc-----------cccccccHHHHHHHhcCeEEec
Confidence 322 58999999999865544443333333333322211000 0112235678888999999999
Q ss_pred CcchhhhhhcccCCcchhhhhccCC--CceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCC
Q 006091 390 SKGYSWEITTVEGGYGLHEILSSRK--SVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPD 467 (662)
Q Consensus 390 S~~~~~~i~~~~~~~~l~~~~~~~~--~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~ 467 (662)
|+.+++.+....++.++...+..+. .++.+||||||.+.|.+.....+..+|..++..++..++..+++++|++.+++
T Consensus 212 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 291 (485)
T 2qzs_A 212 SPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDK 291 (485)
T ss_dssp SHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTT
T ss_pred CHHHHHHHhccccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCC
Confidence 9999887753101111111111123 68999999999999988766555566777777788888899999999984337
Q ss_pred CCEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEE
Q 006091 468 CPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILL 547 (662)
Q Consensus 468 ~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v 547 (662)
.++|+|+||+.+.||++.+++|++.+.+++++|+|+|+|++.+...++.+......++..+.++..+.+..+|+.||++|
T Consensus 292 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv~v 371 (485)
T 2qzs_A 292 VPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVIL 371 (485)
T ss_dssp SCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHHCSEEE
T ss_pred CeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHhCCEEE
Confidence 79999999999999999999999999777999999999975556666666655555666678887777779999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCc---------cceEEECCCCHHHHHHHHHHHHHH
Q 006091 548 MPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGE---------GTGWSFLPLSEESMLTALRFAIRT 618 (662)
Q Consensus 548 ~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~---------~~G~l~~~~d~~~la~aI~~~l~~ 618 (662)
+||.+|+||++++|||+||+|||+++.||++|++.+ + .+|+++++.|+++++++|..++..
T Consensus 372 ~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~----------~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~ 441 (485)
T 2qzs_A 372 VPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD----------CSLENLADGVASGFVFEDSNAWSLLRAIRRAFVL 441 (485)
T ss_dssp ECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCB----------CCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHH
T ss_pred ECCccCCCcHHHHHHHHCCCCEEECCCCCccceecc----------CccccccccccceEEECCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998 6 799999999999999999999842
Q ss_pred hhhCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhCC
Q 006091 619 YREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDP 658 (662)
Q Consensus 619 ~~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy~~~~~~~ 658 (662)
+ +|++.+.++++++..++|+|++++++|+++|++++.+.
T Consensus 442 ~-~~~~~~~~~~~~~~~~~fs~~~~~~~~~~ly~~~~~~~ 480 (485)
T 2qzs_A 442 W-SRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLKLEH 480 (485)
T ss_dssp H-TSHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC---
T ss_pred c-CCHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHhhhhh
Confidence 2 37889999999988899999999999999999987654
No 4
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=100.00 E-value=3.4e-46 Score=408.04 Aligned_cols=424 Identities=25% Similarity=0.355 Sum_probs=321.8
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEE
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 229 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 229 (662)
++|||++|+.+++| ...||+++++.+|+++|+++||+|+|+|+.++...... ...+...+.......+
T Consensus 1 r~MkIl~v~~~~~p-~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 68 (439)
T 3fro_A 1 RHMKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEE-----------IGKIRVFGEEVQVKVS 68 (439)
T ss_dssp CCCEEEEECSCCTT-SCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEE-----------EEEEEETTEEEEEEEE
T ss_pred CceEEEEEecccCC-cccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhh-----------hccccccCcccceeee
Confidence 57999999999888 45899999999999999999999999998875532110 0111112333344455
Q ss_pred EEeeCCceEEEEeCCCCCCCCCCCCCCCCCCCch-hHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHH
Q 006091 230 HEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDN-QFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 308 (662)
Q Consensus 230 ~~~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll 308 (662)
....+|+++++++. .+..+...|+ .+.++ ..++..+...+...+..+-.. ..+|||||+|++..++++.++
T Consensus 69 ~~~~~gv~v~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~~~~~ 140 (439)
T 3fro_A 69 YEERGNLRIYRIGG-GLLDSEDVYG----PGWDGLIRKAVTFGRASVLLLNDLLRE---EPLPDVVHFHDWHTVFAGALI 140 (439)
T ss_dssp EEEETTEEEEEEES-GGGGCSSTTC----SHHHHHHHHHHHHHHHHHHHHHHHTTT---SCCCSEEEEESGGGHHHHHHH
T ss_pred eccCCCceEEEecc-hhcccccccc----CCcchhhhhhHHHHHHHHHHHHHHhcc---CCCCeEEEecchhhhhhHHHH
Confidence 55778999999987 4333333342 24455 566666766666655433111 237999999999888888877
Q ss_pred HhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEe
Q 006091 309 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 388 (662)
Q Consensus 309 ~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~ 388 (662)
+.. .++|+|+++|+....... ........+ . .+.+.....+++.+++.+|.+++
T Consensus 141 ~~~-------~~~~~v~~~h~~~~~~~~-~~~~~~~~~--------~----------~~~~~~~~~~~~~~~~~ad~ii~ 194 (439)
T 3fro_A 141 KKY-------FKIPAVFTIHRLNKSKLP-AFYFHEAGL--------S----------ELAPYPDIDPEHTGGYIADIVTT 194 (439)
T ss_dssp HHH-------HCCCEEEEESCCCCCCEE-HHHHHHTTC--------G----------GGCCSSEECHHHHHHHHCSEEEE
T ss_pred hhc-------cCCCEEEEecccccccCc-hHHhCcccc--------c----------cccccceeeHhhhhhhhccEEEe
Confidence 754 489999999987532211 111100000 0 00012223578888999999999
Q ss_pred cCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCC
Q 006091 389 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 468 (662)
Q Consensus 389 vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~ 468 (662)
+|+.+++... ..++....++.+||||+|.+.|.+.... ..+...+..++++++++ ++
T Consensus 195 ~S~~~~~~~~---------~~~~~~~~~i~vi~ngvd~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~--~~- 251 (439)
T 3fro_A 195 VSRGYLIDEW---------GFFRNFEGKITYVFNGIDCSFWNESYLT-----------GSRDERKKSLLSKFGMD--EG- 251 (439)
T ss_dssp SCHHHHHHTH---------HHHGGGTTSEEECCCCCCTTTSCGGGSC-----------SCHHHHHHHHHHHHTCC--SC-
T ss_pred cCHHHHHHHh---------hhhhhcCCceeecCCCCCchhcCccccc-----------chhhhhHHHHHHHcCCC--CC-
Confidence 9998887632 3345667899999999999988765211 12345578899999997 55
Q ss_pred CEEEEEecCC-CccCHHHHHHHHHhccC----CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcC-CChHHHHHHHHh
Q 006091 469 PLIGFIGRLD-YQKGIDLIRLAAPEILA----DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVG-FNVPISHRITAG 542 (662)
Q Consensus 469 ~~Il~vGrl~-~~Kg~d~Ll~A~~~l~~----~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~ll~~ 542 (662)
++|+|+||+. +.||++.+++|++.+.+ ++++|+|+|+|+..+...++.+..... +.+.+.| .+.+++..+|+.
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~-~~~~~~g~~~~~~~~~~~~~ 330 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVRELYGS 330 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHHHTT
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcC-CEEEEcCCCCHHHHHHHHHH
Confidence 9999999999 99999999999999977 689999999998666677777776666 6666777 467778899999
Q ss_pred cCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhC
Q 006091 543 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREH 622 (662)
Q Consensus 543 aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~ 622 (662)
||++|+||.+|+||++++|||+||+|||+++.||+.|++.+ + +|+++++.|+++++++|.++++. +
T Consensus 331 adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~----------~-~g~~~~~~d~~~la~~i~~ll~~---~ 396 (439)
T 3fro_A 331 VDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN----------E-TGILVKAGDPGELANAILKALEL---S 396 (439)
T ss_dssp CSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCT----------T-TCEEECTTCHHHHHHHHHHHHHH---T
T ss_pred CCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcceeEEc----------C-ceEEeCCCCHHHHHHHHHHHHhc---C
Confidence 99999999999999999999999999999999999999987 5 99999999999999999999873 5
Q ss_pred HHHHHHHHHHHHH--hcCCHHHHHHHHHHHHHHhhhC
Q 006091 623 KSSWEGLMRRGME--KDYTWENAAIQYEQVFEWASID 657 (662)
Q Consensus 623 ~~~~~~l~~~~~~--~~fs~e~~a~~~~~iy~~~~~~ 657 (662)
++.+.++++++.. ++|+|+.++++|+++|++++.+
T Consensus 397 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 433 (439)
T 3fro_A 397 RSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDR 433 (439)
T ss_dssp TTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSCC
T ss_pred HHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHh
Confidence 6777788877743 7899999999999999998764
No 5
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=100.00 E-value=1.1e-40 Score=365.73 Aligned_cols=397 Identities=16% Similarity=0.192 Sum_probs=276.9
Q ss_pred cCCceeEEEEeecccCcc-----ccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCC
Q 006091 148 TRVSYNIVFVTAEAAPYS-----KTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGG 222 (662)
Q Consensus 148 ~~~~MkIl~vs~~~~P~~-----~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 222 (662)
...+|||++|+..++|.. ..||.++++.+|+++|+++||+|+|++........ .
T Consensus 17 ~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~------~--------------- 75 (438)
T 3c48_A 17 RGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQG------E--------------- 75 (438)
T ss_dssp --CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGC------S---------------
T ss_pred CcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCc------c---------------
Confidence 346799999999888842 36999999999999999999999999976421100 0
Q ss_pred ceEEEEEEEeeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhh-ccccCCCCCCCCCccEEEeCCCCc
Q 006091 223 EQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEA-PLVLPLGGFTYGEKCIFLVNDWHA 301 (662)
Q Consensus 223 ~~~~~~~~~~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~~f~~~~pDVVh~h~~~~ 301 (662)
.....++++++.++...+... .. ..+.... ..+...+.+. +... .+|||||+|.+..
T Consensus 76 ------~~~~~~~v~v~~~~~~~~~~~--~~----~~~~~~~---~~~~~~~~~~~~~~~-------~~~Div~~~~~~~ 133 (438)
T 3c48_A 76 ------IVRVAENLRVINIAAGPYEGL--SK----EELPTQL---AAFTGGMLSFTRREK-------VTYDLIHSHYWLS 133 (438)
T ss_dssp ------EEEEETTEEEEEECCSCSSSC--CG----GGGGGGH---HHHHHHHHHHHHHHT-------CCCSEEEEEHHHH
T ss_pred ------cccccCCeEEEEecCCCcccc--ch----hHHHHHH---HHHHHHHHHHHHhcc-------CCCCEEEeCCccH
Confidence 012346888888864332110 00 0011111 1222222222 1111 1389999998766
Q ss_pred chHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHH
Q 006091 302 GLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIV 381 (662)
Q Consensus 302 ~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 381 (662)
.+++.+++.. .++|+|+++|+.... ....+.... . ..+.....+++..++
T Consensus 134 ~~~~~~~~~~-------~~~p~v~~~h~~~~~--------~~~~~~~~~--~-------------~~~~~~~~~~~~~~~ 183 (438)
T 3c48_A 134 GQVGWLLRDL-------WRIPLIHTAHTLAAV--------KNSYRDDSD--T-------------PESEARRICEQQLVD 183 (438)
T ss_dssp HHHHHHHHHH-------HTCCEEEECSSCHHH--------HSCC----C--C-------------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-------cCCCEEEEecCCccc--------ccccccccC--C-------------cchHHHHHHHHHHHh
Confidence 6666555544 379999999985210 000000000 0 000112335677788
Q ss_pred hcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhC
Q 006091 382 TADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELG 461 (662)
Q Consensus 382 ~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lg 461 (662)
.+|.++++|+..++.+. +.++.+..++.+||||+|...|.+.... .+..++++++
T Consensus 184 ~~d~ii~~s~~~~~~~~---------~~~g~~~~k~~vi~ngvd~~~~~~~~~~----------------~~~~~r~~~~ 238 (438)
T 3c48_A 184 NADVLAVNTQEEMQDLM---------HHYDADPDRISVVSPGADVELYSPGNDR----------------ATERSRRELG 238 (438)
T ss_dssp HCSEEEESSHHHHHHHH---------HHHCCCGGGEEECCCCCCTTTSCCC--------------------CHHHHHHTT
T ss_pred cCCEEEEcCHHHHHHHH---------HHhCCChhheEEecCCccccccCCcccc----------------hhhhhHHhcC
Confidence 99999999999888774 2345566789999999999888765321 1234788899
Q ss_pred CCCCCCCCEEEEEecCCCccCHHHHHHHHHhccCC----CeEEEEEeC----CChhhHHHHHHHHhhc-CCcEEEEcCC-
Q 006091 462 LPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILAD----DIQFVMLGS----GDPQFESWMRDTEATY-KDKYRGWVGF- 531 (662)
Q Consensus 462 l~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~----d~~lvivG~----g~~~~~~~~~~l~~~~-~~~~~~~~~~- 531 (662)
++ ++.++|+|+||+.+.||++.+++|++.+.+. +++|+|+|+ |+ ..+.+.+.+.... ..++. +.|+
T Consensus 239 ~~--~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~-~~~~l~~~~~~~~l~~~v~-~~g~~ 314 (438)
T 3c48_A 239 IP--LHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNA-TPDTYRHMAEELGVEKRIR-FLDPR 314 (438)
T ss_dssp CC--SSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC-------CHHHHHHHHTTCTTTEE-EECCC
T ss_pred CC--CCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCc-HHHHHHHHHHHcCCCCcEE-EcCCC
Confidence 87 6788999999999999999999999998642 799999998 53 2222233333221 22232 3444
Q ss_pred ChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHH
Q 006091 532 NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTA 611 (662)
Q Consensus 532 ~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~a 611 (662)
+.+++..+|+.||++|+||.+|+||++++|||+||+|||+++.||+.|++.+ +.+|+++++.|+++++++
T Consensus 315 ~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~----------~~~g~~~~~~d~~~la~~ 384 (438)
T 3c48_A 315 PPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAE----------GETGLLVDGHSPHAWADA 384 (438)
T ss_dssp CHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCB----------TTTEEEESSCCHHHHHHH
T ss_pred ChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCCCChhHHhhC----------CCcEEECCCCCHHHHHHH
Confidence 4566789999999999999999999999999999999999999999999998 889999999999999999
Q ss_pred HHHHHHHhhhCHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHhhhCCCC
Q 006091 612 LRFAIRTYREHKSSWEGLMRRGM--EKDYTWENAAIQYEQVFEWASIDPPY 660 (662)
Q Consensus 612 I~~~l~~~~~~~~~~~~l~~~~~--~~~fs~e~~a~~~~~iy~~~~~~~~~ 660 (662)
|.++++ |++.+.++++++. .+.|+|+.++++|+++|++++..+..
T Consensus 385 i~~l~~----~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 431 (438)
T 3c48_A 385 LATLLD----DDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANENV 431 (438)
T ss_dssp HHHHHH----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHc----CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhccc
Confidence 999987 8888888888772 33499999999999999999987654
No 6
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=100.00 E-value=2.6e-40 Score=369.94 Aligned_cols=406 Identities=17% Similarity=0.123 Sum_probs=280.1
Q ss_pred CceeEEEEeecccCc---------cccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeec
Q 006091 150 VSYNIVFVTAEAAPY---------SKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCF 220 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~---------~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 220 (662)
++|||++|+..++|. ...||+++++.+|+++|+++||+|+|+|+...... .+.|...
T Consensus 6 ~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~--~~~~~~~------------ 71 (499)
T 2r60_A 6 RIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDEN--WPEFSGE------------ 71 (499)
T ss_dssp -CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTT--BGGGCCS------------
T ss_pred ccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCccc--ccchhhh------------
Confidence 369999999988773 24699999999999999999999999997642211 0111100
Q ss_pred CCceEEEEEEEe--eCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCC
Q 006091 221 GGEQEIAFFHEY--REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVND 298 (662)
Q Consensus 221 ~~~~~~~~~~~~--~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~ 298 (662)
.... .+|+++++++....... ... .+..... .+...+.+.++.. ..+|||||+|.
T Consensus 72 --------~~~~~~~~gv~v~~~~~~~~~~~--~~~----~~~~~~~---~~~~~l~~~l~~~------~~~~Divh~~~ 128 (499)
T 2r60_A 72 --------IDYYQETNKVRIVRIPFGGDKFL--PKE----ELWPYLH---EYVNKIINFYREE------GKFPQVVTTHY 128 (499)
T ss_dssp --------EEECTTCSSEEEEEECCSCSSCC--CGG----GCGGGHH---HHHHHHHHHHHHH------TCCCSEEEEEH
T ss_pred --------HHhccCCCCeEEEEecCCCcCCc--CHH----HHHHHHH---HHHHHHHHHHHhc------CCCCCEEEEcC
Confidence 0111 36888888864321100 000 0111111 1112222222210 01689999998
Q ss_pred CCcchHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcC---CChhhhccccccccccccccccCcchhhhH
Q 006091 299 WHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLG---LPSEWYGALEWVFPTWARTHALDTGEAVNV 375 (662)
Q Consensus 299 ~~~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (662)
+..++++.+++.. .++|+|+|+|+.... ...... .....+.. .+.+.....+
T Consensus 129 ~~~~~~~~~~~~~-------~~~p~v~~~H~~~~~------~~~~~~~~~~~~~~~~~------------~~~~~~~~~~ 183 (499)
T 2r60_A 129 GDGGLAGVLLKNI-------KGLPFTFTGHSLGAQ------KMEKLNVNTSNFKEMDE------------RFKFHRRIIA 183 (499)
T ss_dssp HHHHHHHHHHHHH-------HCCCEEEECSSCHHH------HHHTTCCCSTTSHHHHH------------HHCHHHHHHH
T ss_pred CcchHHHHHHHHh-------cCCcEEEEccCcccc------cchhhccCCCCcchhhh------------hHHHHHHHHH
Confidence 7666666655544 379999999986210 000000 00000000 0001122345
Q ss_pred HHHHHHhcCEEEecCcchhhhhhcccCCcchhhh--hc-c----CCCceeEecCCCCCCCCCCCCchhhcccCcccccch
Q 006091 376 LKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEI--LS-S----RKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSG 448 (662)
Q Consensus 376 ~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~--~~-~----~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~ 448 (662)
++.+++.+|.++++|+..++.+.. . ++ . ...++.+||||+|...|.+....
T Consensus 184 ~~~~~~~ad~vi~~S~~~~~~~~~---------~~~~g~~~~~~~~~ki~vi~ngvd~~~~~~~~~~------------- 241 (499)
T 2r60_A 184 ERLTMSYADKIIVSTSQERFGQYS---------HDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGD------------- 241 (499)
T ss_dssp HHHHHHHCSEEEESSHHHHHHTTT---------SGGGTTTCCTTCGGGEEECCCCBCTTTSSSCCCH-------------
T ss_pred HHHHHhcCCEEEECCHHHHHHHHh---------hhcccccccccCCCCeEEECCCcChhhcCccchh-------------
Confidence 677889999999999998887642 2 33 3 45789999999999888765421
Q ss_pred hHHhHHHHHHHhC-----CCCCCCCCEEEEEecCCCccCHHHHHHHHHhccCC---CeEEEEEeCCChh-----------
Q 006091 449 KVQCKIALQKELG-----LPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILAD---DIQFVMLGSGDPQ----------- 509 (662)
Q Consensus 449 ~~~~k~~~r~~lg-----l~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~---d~~lvivG~g~~~----------- 509 (662)
..+..+++++| ++ ++.++|+|+||+.+.||++.+++|++.+.+. .++|+|+|+++..
T Consensus 242 --~~~~~~r~~~~~~~~~~~--~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~ 317 (499)
T 2r60_A 242 --KIKAKITKYLERDLGSER--MELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEE 317 (499)
T ss_dssp --HHHHHHHHHHHHHSCGGG--TTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHH
T ss_pred --hhHHHHHHHhcccccccC--CCCcEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccc
Confidence 12466788887 66 5788999999999999999999999998652 4689999983211
Q ss_pred --hHHHHHHHHhhc----CCcEEEEcCCChHHHHHHHHhc----CEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCccccc
Q 006091 510 --FESWMRDTEATY----KDKYRGWVGFNVPISHRITAGC----DILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRD 579 (662)
Q Consensus 510 --~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~ll~~a----Di~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~e 579 (662)
|...++.+.... .+.+.|++ +.+++..+|+.| |++|+||.+|+||++++|||+||+|||+++.||+.|
T Consensus 318 ~~y~~~l~~~~~~~~l~~~V~~~G~v--~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e 395 (499)
T 2r60_A 318 KEILGKIIELIDNNDCRGKVSMFPLN--SQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAE 395 (499)
T ss_dssp HHHHHHHHHHHHHTTCBTTEEEEECC--SHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHH
T ss_pred hHHHHHHHHHHHhcCCCceEEECCCC--CHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCCCHHH
Confidence 133333333322 23444444 556678999999 999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHhhh
Q 006091 580 TVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEWASI 656 (662)
Q Consensus 580 ii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~---~~~~fs~e~~a~~~~~iy~~~~~ 656 (662)
++.+ +.+|+++++.|+++++++|.++++ +++.+.++++++ +.++|+|++++++|+++|++++.
T Consensus 396 ~v~~----------~~~g~l~~~~d~~~la~~i~~ll~----~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~ 461 (499)
T 2r60_A 396 ILDG----------GKYGVLVDPEDPEDIARGLLKAFE----SEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIAD 461 (499)
T ss_dssp HTGG----------GTSSEEECTTCHHHHHHHHHHHHS----CHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHH
T ss_pred HhcC----------CceEEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 9998 789999999999999999999986 888889988877 34569999999999999999987
Q ss_pred CCC
Q 006091 657 DPP 659 (662)
Q Consensus 657 ~~~ 659 (662)
.+.
T Consensus 462 ~~~ 464 (499)
T 2r60_A 462 RKD 464 (499)
T ss_dssp C--
T ss_pred hhh
Confidence 543
No 7
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=100.00 E-value=1.6e-39 Score=378.77 Aligned_cols=432 Identities=16% Similarity=0.188 Sum_probs=281.5
Q ss_pred CceeEEEEeeccc---------CccccCcHHHHHhh--------HHHHHHhCCCcEE----EEeecCCCCCCcccchhhh
Q 006091 150 VSYNIVFVTAEAA---------PYSKTGGLGDVCGS--------LPVALAARGHRVM----VVSPRYFNGTAADENFTLA 208 (662)
Q Consensus 150 ~~MkIl~vs~~~~---------P~~~~GG~~~~~~~--------La~~L~~~GheV~----Vit~~~~~~~~~~~~~~~~ 208 (662)
+.|+|++|+.+.+ |. +||+.+|+.+ |+++|+++||+|+ |+|...++.. ...|...
T Consensus 277 ~~~~i~~is~hg~~~~~~~lG~~d--tGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~--g~~y~~~ 352 (816)
T 3s28_A 277 MVFNVVILSPHGYFAQDNVLGYPD--TGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAV--GTTCGER 352 (816)
T ss_dssp CCCEEEEECCSSCCCSSSCTTSTT--CSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCT--TSSTTSS
T ss_pred ceeEEEEEcCCcccCccccCCCCC--CCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCC--CCccCCc
Confidence 4589999999987 65 8999999994 7777788999887 9988754321 1111110
Q ss_pred cccCceeEEeecCCceEEEEEEEeeCCceEEEEeCCC-------CCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhcccc
Q 006091 209 KDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPS-------YHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVL 281 (662)
Q Consensus 209 ~~~~~~~~v~~~~~~~~~~~~~~~~~gv~v~~i~~~~-------~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 281 (662)
... ....+|+.+++++... |..+...+ .....|. ..++.......
T Consensus 353 ------~e~------------i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~--------~~L~~F~--~~~l~~il~~~ 404 (816)
T 3s28_A 353 ------LER------------VYDSEYCDILRVPFRTEKGIVRKWISRFEVW--------PYLETYT--EDAAVELSKEL 404 (816)
T ss_dssp ------EEE------------CTTCSSEEEEEECEEETTEEECSCCCTTTCG--------GGHHHHH--HHHHHHHHHHC
T ss_pred ------cee------------ecCcCCeEEEEecCCCccccccccccHHHHH--------HHHHHHH--HHHHHHHHHhc
Confidence 000 0112588888887432 12222222 1122222 11122221111
Q ss_pred CCCCCCCCCccEEEeCCCCcchHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhcccccccccc
Q 006091 282 PLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTW 361 (662)
Q Consensus 282 ~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 361 (662)
.++|||||+|.|.+++++.+++.+. ++|+|+|.|++.... ....+. .| ......|
T Consensus 405 ------~~~PDVIHsH~~~sglva~llar~~-------gvP~V~T~Hsl~~~k------~~~~~~--~~-~~~~~~y--- 459 (816)
T 3s28_A 405 ------NGKPDLIIGNYSDGNLVASLLAHKL-------GVTQCTIAHALEKTK------YPDSDI--YW-KKLDDKY--- 459 (816)
T ss_dssp ------SSCCSEEEEEHHHHHHHHHHHHHHH-------TCCEEEECSCCHHHH------STTTTT--TH-HHHHHHH---
T ss_pred ------CCCCeEEEeCCchHHHHHHHHHHHc-------CCCEEEEEecccccc------cccccc--hh-hhHHHHH---
Confidence 2269999999998888888877764 899999999863111 000010 00 0000000
Q ss_pred ccccccCcchhhhHHHHHHHhcCEEEecCcchhhhhhcccCCcchh------h------hhccCCCceeEecCCCCCCCC
Q 006091 362 ARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLH------E------ILSSRKSVLNGITNGIDITEW 429 (662)
Q Consensus 362 ~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~------~------~~~~~~~ki~vIpnGvd~~~~ 429 (662)
.+......++.++..||.|+++|+..++.+.+....++.. . .++....++.+||||||.+.|
T Consensus 460 ------~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F 533 (816)
T 3s28_A 460 ------HFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIY 533 (816)
T ss_dssp ------CHHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTS
T ss_pred ------HHHHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHc
Confidence 0112233466789999999999998887543211111100 0 001223389999999999999
Q ss_pred CCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCC
Q 006091 430 NPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGD 507 (662)
Q Consensus 430 ~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~ 507 (662)
.|............+......-+....++.+|+...+++++|+|+||+.+.||++.+++|++.+.+ ++++|+|+|+|+
T Consensus 534 ~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~ 613 (816)
T 3s28_A 534 FPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDR 613 (816)
T ss_dssp CCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEECCCT
T ss_pred CccchhhhhhhhccccccccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEeCCC
Confidence 876532100000000000000001123455666333678999999999999999999999999975 489999999996
Q ss_pred h----------hhHHHHHHHHhhcCCcEEEEcCCC-----hHHHHHHHH-hcCEEEEcCCCCCCcHHHHHHHHcCCcEEE
Q 006091 508 P----------QFESWMRDTEATYKDKYRGWVGFN-----VPISHRITA-GCDILLMPSRFEPCGLNQLYAMRYGTIPVV 571 (662)
Q Consensus 508 ~----------~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~ll~-~aDi~v~PS~~E~fgl~~lEAma~G~PvVa 571 (662)
. ..+.+.+.+........+.++|+. .+++..+|+ +||++|+||.+|+||++++||||||+|||+
T Consensus 614 ~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIa 693 (816)
T 3s28_A 614 RKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFA 693 (816)
T ss_dssp TSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEE
T ss_pred cccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEE
Confidence 2 223333333332222333455532 245567777 689999999999999999999999999999
Q ss_pred eCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH---HhcCCHHHHHHHHH
Q 006091 572 HATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM---EKDYTWENAAIQYE 648 (662)
Q Consensus 572 s~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~~---~~~fs~e~~a~~~~ 648 (662)
|+.||++|++.+ +.+|+++++.|+++++++|.++++.+..|++.+.++++++. .++|||+.++++|+
T Consensus 694 sd~GG~~EiV~d----------g~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll 763 (816)
T 3s28_A 694 TCKGGPAEIIVH----------GKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLL 763 (816)
T ss_dssp ESSBTHHHHCCB----------TTTBEEECTTSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHH
T ss_pred eCCCChHHHHcc----------CCcEEEeCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 999999999998 89999999999999999999888655568999999999883 48899999999999
Q ss_pred HHHHHh
Q 006091 649 QVFEWA 654 (662)
Q Consensus 649 ~iy~~~ 654 (662)
++|+..
T Consensus 764 ~lY~~~ 769 (816)
T 3s28_A 764 TLTGVY 769 (816)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999865
No 8
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=100.00 E-value=1.4e-38 Score=342.87 Aligned_cols=365 Identities=19% Similarity=0.219 Sum_probs=270.7
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEE
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 229 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 229 (662)
++|||++|+..++|. .||.++++.+|+++| +||+|+|+++...... ...+.
T Consensus 3 ~~mkIl~v~~~~~p~--~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~--~~~~~----------------------- 53 (394)
T 3okp_A 3 ASRKTLVVTNDFPPR--IGGIQSYLRDFIATQ--DPESIVVFASTQNAEE--AHAYD----------------------- 53 (394)
T ss_dssp -CCCEEEEESCCTTS--CSHHHHHHHHHHTTS--CGGGEEEEEECSSHHH--HHHHH-----------------------
T ss_pred CCceEEEEeCccCCc--cchHHHHHHHHHHHh--cCCeEEEEECCCCccc--hhhhc-----------------------
Confidence 469999999988885 799999999999999 6999999998743210 00111
Q ss_pred EEeeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHH
Q 006091 230 HEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 309 (662)
Q Consensus 230 ~~~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~ 309 (662)
...++++++++...+. .....+..+.+ .+... +||+||+|..........+.
T Consensus 54 --~~~~~~~~~~~~~~~~--------------~~~~~~~~l~~----~~~~~--------~~Dvv~~~~~~~~~~~~~~~ 105 (394)
T 3okp_A 54 --KTLDYEVIRWPRSVML--------------PTPTTAHAMAE----IIRER--------EIDNVWFGAAAPLALMAGTA 105 (394)
T ss_dssp --TTCSSEEEEESSSSCC--------------SCHHHHHHHHH----HHHHT--------TCSEEEESSCTTGGGGHHHH
T ss_pred --cccceEEEEccccccc--------------cchhhHHHHHH----HHHhc--------CCCEEEECCcchHHHHHHHH
Confidence 1246777777643211 11111112222 22212 69999999765543333333
Q ss_pred hhcCCCCCCCCCc-EEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEe
Q 006091 310 SKYRPHGVYKDAR-SILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 388 (662)
Q Consensus 310 ~~~~~~~~~~gip-~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~ 388 (662)
.+ .++| +|+++|+... .+.. ......+++..++.+|.+++
T Consensus 106 ~~-------~~~~~~i~~~h~~~~----------------~~~~----------------~~~~~~~~~~~~~~~d~ii~ 146 (394)
T 3okp_A 106 KQ-------AGASKVIASTHGHEV----------------GWSM----------------LPGSRQSLRKIGTEVDVLTY 146 (394)
T ss_dssp HH-------TTCSEEEEECCSTHH----------------HHTT----------------SHHHHHHHHHHHHHCSEEEE
T ss_pred Hh-------cCCCcEEEEeccchh----------------hhhh----------------cchhhHHHHHHHHhCCEEEE
Confidence 33 3565 8889996421 0000 01223456778899999999
Q ss_pred cCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCC
Q 006091 389 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 468 (662)
Q Consensus 389 vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~ 468 (662)
+|+..++.+.. .+. ...++.+||||+|.+.|.+.... .+..++++++++ ++.
T Consensus 147 ~s~~~~~~~~~---------~~~-~~~~~~vi~ngv~~~~~~~~~~~----------------~~~~~~~~~~~~--~~~ 198 (394)
T 3okp_A 147 ISQYTLRRFKS---------AFG-SHPTFEHLPSGVDVKRFTPATPE----------------DKSATRKKLGFT--DTT 198 (394)
T ss_dssp SCHHHHHHHHH---------HHC-SSSEEEECCCCBCTTTSCCCCHH----------------HHHHHHHHTTCC--TTC
T ss_pred cCHHHHHHHHH---------hcC-CCCCeEEecCCcCHHHcCCCCch----------------hhHHHHHhcCCC--cCc
Confidence 99998887752 222 35789999999999988763321 257889999987 677
Q ss_pred CEEEEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhc--CCcEEEEcCCChHHHHHHHHhcC
Q 006091 469 PLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATY--KDKYRGWVGFNVPISHRITAGCD 544 (662)
Q Consensus 469 ~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~ll~~aD 544 (662)
++|+|+||+.+.||++.+++|++.+.+ ++++|+|+|+|+ ....++.+.... ++.+.+++ +.+++..+|+.||
T Consensus 199 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~l~~~~~~~~~~v~~~g~~--~~~~~~~~~~~ad 274 (394)
T 3okp_A 199 PVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGR--YESTLRRLATDVSQNVKFLGRL--EYQDMINTLAAAD 274 (394)
T ss_dssp CEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCT--THHHHHHHTGGGGGGEEEEESC--CHHHHHHHHHHCS
T ss_pred eEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCch--HHHHHHHHHhcccCeEEEcCCC--CHHHHHHHHHhCC
Confidence 999999999999999999999999865 589999999985 233334333332 33444444 5567789999999
Q ss_pred EEEEcCCC-------CCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 545 ILLMPSRF-------EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 545 i~v~PS~~-------E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
++|+||.+ |+||++++|||++|+|||+++.||+.|++.+ + +|+++++.|+++++++|.++++
T Consensus 275 ~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~----------~-~g~~~~~~d~~~l~~~i~~l~~ 343 (394)
T 3okp_A 275 IFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTP----------A-TGLVVEGSDVDKLSELLIELLD 343 (394)
T ss_dssp EEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCT----------T-TEEECCTTCHHHHHHHHHHHHT
T ss_pred EEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhc----------C-CceEeCCCCHHHHHHHHHHHHh
Confidence 99999999 9999999999999999999999999999998 7 9999999999999999999987
Q ss_pred HhhhCHHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHhhhC
Q 006091 618 TYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEWASID 657 (662)
Q Consensus 618 ~~~~~~~~~~~l~~~~---~~~~fs~e~~a~~~~~iy~~~~~~ 657 (662)
+++.+.++++++ +.++|+|+.++++|+++|+++..+
T Consensus 344 ----~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r~ 382 (394)
T 3okp_A 344 ----DPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPRK 382 (394)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC-
T ss_pred ----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhccC
Confidence 888899998877 356799999999999999988754
No 9
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=100.00 E-value=6.2e-38 Score=339.46 Aligned_cols=373 Identities=17% Similarity=0.182 Sum_probs=257.2
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEE
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFH 230 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 230 (662)
-|+.-+....+ |. .||.++++.+|+++|+++||+|+|++...+... .
T Consensus 13 ~~~~~~~~~~~-p~--~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~------------------------------~ 59 (394)
T 2jjm_A 13 HMKLKIGITCY-PS--VGGSGVVGTELGKQLAERGHEIHFITSGLPFRL------------------------------N 59 (394)
T ss_dssp --CCEEEEECC-C----CHHHHHHHHHHHHHHHTTCEEEEECSSCC----------------------------------
T ss_pred hheeeeehhcC-CC--CCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcc------------------------------c
Confidence 35555555554 53 699999999999999999999999987532110 0
Q ss_pred EeeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHh
Q 006091 231 EYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 310 (662)
Q Consensus 231 ~~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~ 310 (662)
...+++.++.++...+.. +. .....+ .+...+.+.++.. +|||||+|.........++..
T Consensus 60 ~~~~~i~~~~~~~~~~~~----~~-------~~~~~~-~~~~~l~~~l~~~--------~~Dvv~~~~~~~~~~~~~~~~ 119 (394)
T 2jjm_A 60 KVYPNIYFHEVTVNQYSV----FQ-------YPPYDL-ALASKMAEVAQRE--------NLDILHVHYAIPHAICAYLAK 119 (394)
T ss_dssp CCCTTEEEECCCCC--------CC-------SCCHHH-HHHHHHHHHHHHH--------TCSEEEECSSTTHHHHHHHHH
T ss_pred ccCCceEEEecccccccc----cc-------cccccH-HHHHHHHHHHHHc--------CCCEEEEcchhHHHHHHHHHH
Confidence 011344444333222110 00 001111 1112222222222 699999997655433444433
Q ss_pred hcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecC
Q 006091 311 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 390 (662)
Q Consensus 311 ~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS 390 (662)
+.. ..++|+|+++|+... ...+.. .....+++..++.+|.++++|
T Consensus 120 ~~~----~~~~p~v~~~h~~~~---------~~~~~~----------------------~~~~~~~~~~~~~ad~ii~~s 164 (394)
T 2jjm_A 120 QMI----GERIKIVTTLHGTDI---------TVLGSD----------------------PSLNNLIRFGIEQSDVVTAVS 164 (394)
T ss_dssp HHT----TTCSEEEEECCHHHH---------HTTTTC----------------------TTTHHHHHHHHHHSSEEEESC
T ss_pred Hhh----cCCCCEEEEEecCcc---------cccCCC----------------------HHHHHHHHHHHhhCCEEEECC
Confidence 321 026999999997411 000000 011235677788999999999
Q ss_pred cchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCE
Q 006091 391 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 470 (662)
Q Consensus 391 ~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~ 470 (662)
+..++.+.. .+.. ..++.+||||+|...|.+.. +..++++++++ ++.++
T Consensus 165 ~~~~~~~~~---------~~~~-~~~~~vi~ngv~~~~~~~~~-------------------~~~~~~~~~~~--~~~~~ 213 (394)
T 2jjm_A 165 HSLINETHE---------LVKP-NKDIQTVYNFIDERVYFKRD-------------------MTQLKKEYGIS--ESEKI 213 (394)
T ss_dssp HHHHHHHHH---------HTCC-SSCEEECCCCCCTTTCCCCC-------------------CHHHHHHTTCC-----CE
T ss_pred HHHHHHHHH---------hhCC-cccEEEecCCccHHhcCCcc-------------------hHHHHHHcCCC--CCCeE
Confidence 998887752 2222 46899999999998887653 24577888886 57789
Q ss_pred EEEEecCCCccCHHHHHHHHHhccC-CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEEEc
Q 006091 471 IGFIGRLDYQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMP 549 (662)
Q Consensus 471 Il~vGrl~~~Kg~d~Ll~A~~~l~~-~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~P 549 (662)
|+|+||+.+.||++.+++|++.+.+ .+++|+|+|+|+ ..+.+.+.+........+.+.|+.+ ++..+|+.||++++|
T Consensus 214 i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~-~~~~l~~~~~~~~l~~~v~~~g~~~-~~~~~~~~adv~v~p 291 (394)
T 2jjm_A 214 LIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGP-EFCTILQLVKNLHIEDRVLFLGKQD-NVAELLAMSDLMLLL 291 (394)
T ss_dssp EEEECCCCGGGTHHHHHHHHHHHHHSSCCEEEEECCCT-THHHHHHHHHTTTCGGGBCCCBSCS-CTHHHHHTCSEEEEC
T ss_pred EEEeeccccccCHHHHHHHHHHHHhhCCCEEEEECCch-HHHHHHHHHHHcCCCCeEEEeCchh-hHHHHHHhCCEEEec
Confidence 9999999999999999999999875 379999999985 3333333333321112222444433 356899999999999
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 006091 550 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 629 (662)
Q Consensus 550 S~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l 629 (662)
|.+|+||++++|||+||+|||+++.||+.|++.+ +.+|+++++.|+++++++|.++++ +++.+.++
T Consensus 292 s~~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~~----------~~~g~~~~~~d~~~la~~i~~l~~----~~~~~~~~ 357 (394)
T 2jjm_A 292 SEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQH----------GDTGYLCEVGDTTGVADQAIQLLK----DEELHRNM 357 (394)
T ss_dssp CSCCSCCHHHHHHHHTTCCEEEECCTTSTTTCCB----------TTTEEEECTTCHHHHHHHHHHHHH----CHHHHHHH
T ss_pred cccCCCchHHHHHHhcCCCEEEecCCChHHHhhc----------CCceEEeCCCCHHHHHHHHHHHHc----CHHHHHHH
Confidence 9999999999999999999999999999999998 889999999999999999999987 88888888
Q ss_pred HHHHH---HhcCCHHHHHHHHHHHHHHhhhCC
Q 006091 630 MRRGM---EKDYTWENAAIQYEQVFEWASIDP 658 (662)
Q Consensus 630 ~~~~~---~~~fs~e~~a~~~~~iy~~~~~~~ 658 (662)
++++. .++|+|++++++|+++|++++...
T Consensus 358 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 389 (394)
T 2jjm_A 358 GERARESVYEQFRSEKIVSQYETIYYDVLRDD 389 (394)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh
Confidence 88773 489999999999999999988754
No 10
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=100.00 E-value=2e-38 Score=339.57 Aligned_cols=365 Identities=14% Similarity=0.096 Sum_probs=256.3
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEEE
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 231 (662)
|||++++..++| .||.++++.+++++|+++||+|+|+++.....
T Consensus 1 MkIl~i~~~~~~---~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~--------------------------------- 44 (374)
T 2iw1_A 1 MIVAFCLYKYFP---FGGLQRDFMRIASTVAARGHHVRVYTQSWEGD--------------------------------- 44 (374)
T ss_dssp -CEEEECSEECT---TCHHHHHHHHHHHHHHHTTCCEEEEESEECSC---------------------------------
T ss_pred CeEEEEEeecCC---CcchhhHHHHHHHHHHhCCCeEEEEecCCCCC---------------------------------
Confidence 899999998777 49999999999999999999999999763211
Q ss_pred eeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHhh
Q 006091 232 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 311 (662)
Q Consensus 232 ~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~~ 311 (662)
..++++++.++...+ .+..++..+...+.+.+... +||+||+|.+..++...+...
T Consensus 45 ~~~~~~v~~~~~~~~---------------~~~~~~~~~~~~l~~~i~~~--------~~Dvv~~~~~~~~~~~~~~~~- 100 (374)
T 2iw1_A 45 CPKAFELIQVPVKSH---------------TNHGRNAEYYAWVQNHLKEH--------PADRVVGFNKMPGLDVYFAAD- 100 (374)
T ss_dssp CCTTCEEEECCCCCS---------------SHHHHHHHHHHHHHHHHHHS--------CCSEEEESSCCTTCSEEECCS-
T ss_pred CCCCcEEEEEccCcc---------------cchhhHHHHHHHHHHHHhcc--------CCCEEEEecCCCCceeeeccc-
Confidence 013666666653321 11222222333333333222 699999997543321111000
Q ss_pred cCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHH--hcCEEEec
Q 006091 312 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIV--TADRLLTV 389 (662)
Q Consensus 312 ~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~--~ad~ii~v 389 (662)
. ..++.+.+.|+.. ..+... +.....+++..+. .+|.++++
T Consensus 101 ~------~~~~~~~~~~~~~----------------~~~~~~---------------~~~~~~~~~~~~~~~~~d~ii~~ 143 (374)
T 2iw1_A 101 V------CYAEKVAQEKGFL----------------YRLTSR---------------YRHYAAFERATFEQGKSTKLMML 143 (374)
T ss_dssp C------CHHHHHHHHCCHH----------------HHTSHH---------------HHHHHHHHHHHHSTTCCCEEEES
T ss_pred c------ccceeeeecccch----------------hhhcHH---------------HHHHHHHHHHHhhccCCcEEEEc
Confidence 0 1223332333210 000000 0111233444443 68999999
Q ss_pred CcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCC
Q 006091 390 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP 469 (662)
Q Consensus 390 S~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~ 469 (662)
|+..++.+. +.++.+..++.+||||+|...|.+.... ..+..++++++++ ++.+
T Consensus 144 s~~~~~~~~---------~~~~~~~~~~~vi~ngv~~~~~~~~~~~---------------~~~~~~~~~~~~~--~~~~ 197 (374)
T 2iw1_A 144 TDKQIADFQ---------KHYQTEPERFQILPPGIYPDRKYSEQIP---------------NSREIYRQKNGIK--EQQN 197 (374)
T ss_dssp CHHHHHHHH---------HHHCCCGGGEEECCCCCCGGGSGGGSCT---------------THHHHHHHHTTCC--TTCE
T ss_pred CHHHHHHHH---------HHhCCChhheEEecCCcCHHhcCcccch---------------hHHHHHHHHhCCC--CCCe
Confidence 999888774 3345566789999999998877654321 1256788999987 6778
Q ss_pred EEEEEecCCCccCHHHHHHHHHhccC---CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEE
Q 006091 470 LIGFIGRLDYQKGIDLIRLAAPEILA---DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 546 (662)
Q Consensus 470 ~Il~vGrl~~~Kg~d~Ll~A~~~l~~---~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~ 546 (662)
+|+|+||+.+.||++.+++|++.+.+ ++++|+++|+|+. +.+.+.+........+.+.|+.+ ++..+|+.||++
T Consensus 198 ~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~--~~~~~~~~~~~~~~~v~~~g~~~-~~~~~~~~ad~~ 274 (374)
T 2iw1_A 198 LLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKP--RKFEALAEKLGVRSNVHFFSGRN-DVSELMAAADLL 274 (374)
T ss_dssp EEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC--HHHHHHHHHHTCGGGEEEESCCS-CHHHHHHHCSEE
T ss_pred EEEEeccchhhcCHHHHHHHHHHhHhccCCceEEEEEcCCCH--HHHHHHHHHcCCCCcEEECCCcc-cHHHHHHhcCEE
Confidence 99999999999999999999999865 3899999999862 33333333322112233555543 466899999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEEC-CCCHHHHHHHHHHHHHHhhhCHHH
Q 006091 547 LMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFL-PLSEESMLTALRFAIRTYREHKSS 625 (662)
Q Consensus 547 v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~-~~d~~~la~aI~~~l~~~~~~~~~ 625 (662)
++||.+|+||++++|||+||+|||+++.||..|++.+ +.+|++++ +.|+++++++|.++++ |++.
T Consensus 275 v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~----------~~~g~~~~~~~~~~~l~~~i~~l~~----~~~~ 340 (374)
T 2iw1_A 275 LHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIAD----------ANCGTVIAEPFSQEQLNEVLRKALT----QSPL 340 (374)
T ss_dssp EECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHH----------HTCEEEECSSCCHHHHHHHHHHHHH----CHHH
T ss_pred EeccccCCcccHHHHHHHCCCCEEEecCCCchhhhcc----------CCceEEeCCCCCHHHHHHHHHHHHc----ChHH
Confidence 9999999999999999999999999999999999998 88999998 8999999999999987 8889
Q ss_pred HHHHHHHH--HHhcCCHHHHHHHHHHHHHHhhh
Q 006091 626 WEGLMRRG--MEKDYTWENAAIQYEQVFEWASI 656 (662)
Q Consensus 626 ~~~l~~~~--~~~~fs~e~~a~~~~~iy~~~~~ 656 (662)
++++++++ ..++|+|+.+++++.++++..+.
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 373 (374)
T 2iw1_A 341 RMAWAENARHYADTQDLYSLPEKAADIITGGLD 373 (374)
T ss_dssp HHHHHHHHHHHHHHSCCSCHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhc
Confidence 99998887 35678999999999999886653
No 11
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=100.00 E-value=4.6e-37 Score=335.10 Aligned_cols=363 Identities=16% Similarity=0.150 Sum_probs=250.9
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEE
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 229 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 229 (662)
++|||++++.. + ..||.++++.+|+++|+++||+|+|++..... ..+......
T Consensus 39 ~~mkIl~v~~~--~--~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~-----~~~~~~~~~------------------ 91 (416)
T 2x6q_A 39 KGRSFVHVNST--S--FGGGVAEILHSLVPLLRSIGIEARWFVIEGPT-----EFFNVTKTF------------------ 91 (416)
T ss_dssp TTCEEEEEESC--S--SSSTHHHHHHHHHHHHHHTTCEEEEEECCCCH-----HHHHHHHHH------------------
T ss_pred hccEEEEEeCC--C--CCCCHHHHHHHHHHHHHhCCCeEEEEEccCCc-----chhhhhccc------------------
Confidence 56999999975 3 26999999999999999999999999865211 011000000
Q ss_pred EEeeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHH
Q 006091 230 HEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 309 (662)
Q Consensus 230 ~~~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~ 309 (662)
.....+.+ .+ .+. ......+..+...+.+.++ ..+|||||+|++....+..+++
T Consensus 92 ~~~~~~~~-------~~-----~~~------~~~~~~~~~~~~~~~~~l~--------~~~~Dvv~~~~~~~~~~~~~~~ 145 (416)
T 2x6q_A 92 HNALQGNE-------SL-----KLT------EEMKELYLNVNRENSKFID--------LSSFDYVLVHDPQPAALIEFYE 145 (416)
T ss_dssp HHHHTTCC-------SC-----CCC------HHHHHHHHHHHHHHHHSSC--------GGGSSEEEEESSTTGGGGGGSC
T ss_pred ceeecccc-------cc-----ccc------HHHHHHHHHHHHHHHHHHh--------hcCCCEEEEeccchhhHHHHHH
Confidence 00000110 00 000 0011112222222223322 1269999999876544332211
Q ss_pred hhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEE-e
Q 006091 310 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLL-T 388 (662)
Q Consensus 310 ~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii-~ 388 (662)
..+|+|+++|+.... ... ....+++..+..+|.++ +
T Consensus 146 ---------~~~p~v~~~h~~~~~-------------~~~---------------------~~~~~~~~~~~~~~~~i~~ 182 (416)
T 2x6q_A 146 ---------KKSPWLWRCHIDLSS-------------PNR---------------------EFWEFLRRFVEKYDRYIFH 182 (416)
T ss_dssp ---------CCSCEEEECCSCCSS-------------CCH---------------------HHHHHHHHHHTTSSEEEES
T ss_pred ---------hcCCEEEEEccccCC-------------ccH---------------------HHHHHHHHHHHhCCEEEEe
Confidence 248999999975211 000 11123455566778776 5
Q ss_pred cCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCC
Q 006091 389 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 468 (662)
Q Consensus 389 vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~ 468 (662)
+|+...+.+ ...++.+||||+|...+.+.... ...+..++++++++ ++.
T Consensus 183 ~s~~~~~~~---------------~~~~~~vi~ngvd~~~~~~~~~~--------------~~~~~~~r~~~~~~--~~~ 231 (416)
T 2x6q_A 183 LPEYVQPEL---------------DRNKAVIMPPSIDPLSEKNVELK--------------QTEILRILERFDVD--PEK 231 (416)
T ss_dssp SGGGSCTTS---------------CTTTEEECCCCBCTTSTTTSCCC--------------HHHHHHHHHHTTCC--TTS
T ss_pred chHHHHhhC---------------CccceEEeCCCCChhhhcccccC--------------hhhHHHHHHHhCCC--CCC
Confidence 555433221 23689999999998766432210 11256788999987 678
Q ss_pred CEEEEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCCh---hhHHHHHHHHhh----cCCcEEEEcC-CChHHHHH
Q 006091 469 PLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDP---QFESWMRDTEAT----YKDKYRGWVG-FNVPISHR 538 (662)
Q Consensus 469 ~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~---~~~~~~~~l~~~----~~~~~~~~~~-~~~~~~~~ 538 (662)
++|+|+||+.+.||++.+++|++.+.+ ++++|+|+|+|+. .+...++.+... .++.+.|++. .+.+++..
T Consensus 232 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~ 311 (416)
T 2x6q_A 232 PIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNA 311 (416)
T ss_dssp CEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHH
T ss_pred cEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHH
Confidence 999999999999999999999999865 5899999999952 233333333332 2345555553 23556789
Q ss_pred HHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHH
Q 006091 539 ITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 618 (662)
Q Consensus 539 ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~ 618 (662)
+|+.||++|+||.+|+||++++|||+||+|||+++.||++|++.+ +.+|++++ |+++++++|..+++
T Consensus 312 ~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~----------~~~g~l~~--d~~~la~~i~~ll~- 378 (416)
T 2x6q_A 312 FQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQIVD----------GETGFLVR--DANEAVEVVLYLLK- 378 (416)
T ss_dssp HHHHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESCHHHHHHCCB----------TTTEEEES--SHHHHHHHHHHHHH-
T ss_pred HHHhCCEEEECCCcCCCccHHHHHHHcCCCEEEccCCCChhheec----------CCCeEEEC--CHHHHHHHHHHHHh-
Confidence 999999999999999999999999999999999999999999998 88999997 89999999999987
Q ss_pred hhhCHHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHhh
Q 006091 619 YREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEWAS 655 (662)
Q Consensus 619 ~~~~~~~~~~l~~~~---~~~~fs~e~~a~~~~~iy~~~~ 655 (662)
|++.++++++++ +.++|+|++++++|+++|++++
T Consensus 379 ---~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~l~ 415 (416)
T 2x6q_A 379 ---HPEVSKEMGAKAKERVRKNFIITKHMERYLDILNSLG 415 (416)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHTC-
T ss_pred ---CHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh
Confidence 888899998887 3468999999999999999875
No 12
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=100.00 E-value=5.3e-36 Score=324.36 Aligned_cols=365 Identities=17% Similarity=0.201 Sum_probs=252.4
Q ss_pred cCCceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEE
Q 006091 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIA 227 (662)
Q Consensus 148 ~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 227 (662)
..++|||++++..++|. .||.++++.+++++|+++||+|+|++........ +.+.
T Consensus 17 ~~~~MkIl~i~~~~~~~--~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~--~~~~--------------------- 71 (406)
T 2gek_A 17 RGSHMRIGMVCPYSFDV--PGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKL--PDYV--------------------- 71 (406)
T ss_dssp ----CEEEEECSSCTTS--CCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCC--CTTE---------------------
T ss_pred CCCcceEEEEeccCCCC--CCcHHHHHHHHHHHHHHCCCeEEEEecCCccccC--Cccc---------------------
Confidence 34679999999765553 6999999999999999999999999976432100 0000
Q ss_pred EEEEeeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHH
Q 006091 228 FFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVL 307 (662)
Q Consensus 228 ~~~~~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~l 307 (662)
...+ +++.++... ....+ .+ ....+ ..+.+.+... +||+||+|.......+.+
T Consensus 72 ----~~~~-~~~~~~~~~---~~~~~-----~~--~~~~~----~~l~~~l~~~--------~~Dii~~~~~~~~~~~~~ 124 (406)
T 2gek_A 72 ----VSGG-KAVPIPYNG---SVARL-----RF--GPATH----RKVKKWIAEG--------DFDVLHIHEPNAPSLSML 124 (406)
T ss_dssp ----EECC-CCC--------------------C--CHHHH----HHHHHHHHHH--------CCSEEEEECCCSSSHHHH
T ss_pred ----ccCC-cEEeccccC---Ccccc-----cc--cHHHH----HHHHHHHHhc--------CCCEEEECCccchHHHHH
Confidence 0011 222222100 00000 00 01111 1122222211 689999998776655444
Q ss_pred HHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEE
Q 006091 308 LASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLL 387 (662)
Q Consensus 308 l~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii 387 (662)
+... .++|+|+++|+... .. .+... ...+++..++.+|.++
T Consensus 125 ~~~~-------~~~~~i~~~h~~~~-----~~---------~~~~~------------------~~~~~~~~~~~~d~ii 165 (406)
T 2gek_A 125 ALQA-------AEGPIVATFHTSTT-----KS---------LTLSV------------------FQGILRPYHEKIIGRI 165 (406)
T ss_dssp HHHH-------EESSEEEEECCCCC-----SH---------HHHHH------------------HHSTTHHHHTTCSEEE
T ss_pred HHHh-------cCCCEEEEEcCcch-----hh---------hhHHH------------------HHHHHHHHHhhCCEEE
Confidence 4443 37999999998421 10 01000 0112235678999999
Q ss_pred ecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCC
Q 006091 388 TVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPD 467 (662)
Q Consensus 388 ~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~ 467 (662)
++|+..++.+.+ .+ +..++ +||||+|...+.+.... .+++ .+
T Consensus 166 ~~s~~~~~~~~~---------~~--~~~~~-vi~~~v~~~~~~~~~~~------------------------~~~~--~~ 207 (406)
T 2gek_A 166 AVSDLARRWQME---------AL--GSDAV-EIPNGVDVASFADAPLL------------------------DGYP--RE 207 (406)
T ss_dssp ESSHHHHHHHHH---------HH--SSCEE-ECCCCBCHHHHHTCCCC------------------------TTCS--CS
T ss_pred ECCHHHHHHHHH---------hc--CCCcE-EecCCCChhhcCCCchh------------------------hhcc--CC
Confidence 999998887742 12 34578 99999997665443211 1112 35
Q ss_pred CCEEEEEecC-CCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCC-ChHHHHHHHHhc
Q 006091 468 CPLIGFIGRL-DYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGC 543 (662)
Q Consensus 468 ~~~Il~vGrl-~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~ll~~a 543 (662)
.++|+|+|++ .+.||++.+++|++.+.+ ++++|+|+|+|+. +.+.+.+ .....++. +.|+ +.+++..+|+.|
T Consensus 208 ~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~--~~l~~~~-~~~~~~v~-~~g~~~~~~~~~~~~~a 283 (406)
T 2gek_A 208 GRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE--DELREQA-GDLAGHLR-FLGQVDDATKASAMRSA 283 (406)
T ss_dssp SCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH--HHHHHHT-GGGGGGEE-ECCSCCHHHHHHHHHHS
T ss_pred CeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH--HHHHHHH-HhccCcEE-EEecCCHHHHHHHHHHC
Confidence 6899999999 999999999999999976 4899999999963 3333333 22222333 4444 556677999999
Q ss_pred CEEEEcCC-CCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhC
Q 006091 544 DILLMPSR-FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREH 622 (662)
Q Consensus 544 Di~v~PS~-~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~ 622 (662)
|++|+||. .|+||++++|||+||+|||+++.||+.|++.+ +.+|+++++.|+++++++|.++++ +
T Consensus 284 dv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~----------~~~g~~~~~~d~~~l~~~i~~l~~----~ 349 (406)
T 2gek_A 284 DVYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRRVLAD----------GDAGRLVPVDDADGMAAALIGILE----D 349 (406)
T ss_dssp SEEEECCCSCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTT----------TTSSEECCTTCHHHHHHHHHHHHH----C
T ss_pred CEEEecCCCCCCCchHHHHHHHcCCCEEEecCCcHHHHhcC----------CCceEEeCCCCHHHHHHHHHHHHc----C
Confidence 99999996 89999999999999999999999999999998 889999999999999999999987 8
Q ss_pred HHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHhhhCCC
Q 006091 623 KSSWEGLMRRGM--EKDYTWENAAIQYEQVFEWASIDPP 659 (662)
Q Consensus 623 ~~~~~~l~~~~~--~~~fs~e~~a~~~~~iy~~~~~~~~ 659 (662)
++.+.++++++. .++|+|++++++|.++|++++...+
T Consensus 350 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 388 (406)
T 2gek_A 350 DQLRAGYVARASERVHRYDWSVVSAQIMRVYETVSGAGI 388 (406)
T ss_dssp HHHHHHHHHHHHHHGGGGBHHHHHHHHHHHHHHHCCTTC
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhcc
Confidence 888888888773 3489999999999999999987554
No 13
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=100.00 E-value=4.1e-36 Score=327.04 Aligned_cols=230 Identities=16% Similarity=0.151 Sum_probs=187.0
Q ss_pred HHHhcC--EEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHH
Q 006091 379 AIVTAD--RLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIAL 456 (662)
Q Consensus 379 ~~~~ad--~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~ 456 (662)
.++.+| .++++|+..++.+.. ++. ..++.+||||+|...|. ..
T Consensus 128 ~~~~~~~~~ii~~S~~~~~~~~~----------~~~-~~~~~vi~ngvd~~~~~------------------------~~ 172 (413)
T 3oy2_A 128 IFSHPKVVGVMAMSKCWISDICN----------YGC-KVPINIVSHFVDTKTIY------------------------DA 172 (413)
T ss_dssp GGGCTTEEEEEESSTHHHHHHHH----------TTC-CSCEEECCCCCCCCCCT------------------------TH
T ss_pred HHhccCCceEEEcCHHHHHHHHH----------cCC-CCceEEeCCCCCHHHHH------------------------HH
Confidence 346777 999999999888752 233 57899999999988771 24
Q ss_pred HHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChh----hHHHHHHHHhhcC--Cc----
Q 006091 457 QKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQ----FESWMRDTEATYK--DK---- 524 (662)
Q Consensus 457 r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~----~~~~~~~l~~~~~--~~---- 524 (662)
+++++++...+.++|+++||+.+.||++.+++|++.+.+ ++++|+|+|+|+.. ....++.+..... .+
T Consensus 173 ~~~~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l 252 (413)
T 3oy2_A 173 RKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHL 252 (413)
T ss_dssp HHHTTCGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHH
T ss_pred HHhcCCCcccCceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccc
Confidence 667777622268899999999999999999999999854 58999999999632 1234444333322 22
Q ss_pred --EEEEcCC-ChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccc-----
Q 006091 525 --YRGWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGT----- 596 (662)
Q Consensus 525 --~~~~~~~-~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~----- 596 (662)
++.+.|+ +.+++..+|+.||++|+||.+|+||++++|||+||+|||+++.||++|++.+ +.+
T Consensus 253 ~~vv~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~----------~~~~~i~~ 322 (413)
T 3oy2_A 253 NKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSG----------DCVYKIKP 322 (413)
T ss_dssp TTEEEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCHHHHHHSCT----------TTSEEECC
T ss_pred cceeeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCCChHHHHcc----------Cccccccc
Confidence 3556664 5677889999999999999999999999999999999999999999999988 555
Q ss_pred ----------eE--EECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHhhhCC
Q 006091 597 ----------GW--SFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM---EKDYTWENAAIQYEQVFEWASIDP 658 (662)
Q Consensus 597 ----------G~--l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~~---~~~fs~e~~a~~~~~iy~~~~~~~ 658 (662)
|+ ++++.|+++++++| .+++ +++.+.++++++. .++|+|+.++++|+++|++++.++
T Consensus 323 ~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~----~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 394 (413)
T 3oy2_A 323 SAWISVDDRDGIGGIEGIIDVDDLVEAF-TFFK----DEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVE 394 (413)
T ss_dssp CEEEECTTTCSSCCEEEECCHHHHHHHH-HHTT----SHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC--
T ss_pred ccccccccccCcceeeCCCCHHHHHHHH-HHhc----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 99 99999999999999 9887 8899999998874 368999999999999999998754
No 14
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=100.00 E-value=5.3e-35 Score=310.34 Aligned_cols=318 Identities=15% Similarity=0.091 Sum_probs=232.6
Q ss_pred ceeEEEEeec--------ccCc--cccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeec
Q 006091 151 SYNIVFVTAE--------AAPY--SKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCF 220 (662)
Q Consensus 151 ~MkIl~vs~~--------~~P~--~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 220 (662)
+|||++++.. +.|+ ...||.++++.+++++|+++||+|+|+++......
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~--------------------- 61 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAG--------------------- 61 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCC---------------------
T ss_pred ccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCC---------------------
Confidence 5999999998 4221 23699999999999999999999999987642210
Q ss_pred CCceEEEEEEEeeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCC
Q 006091 221 GGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWH 300 (662)
Q Consensus 221 ~~~~~~~~~~~~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~ 300 (662)
.++++++.. + ... .+.. .++.. +|||||+|.+.
T Consensus 62 ------------~~~~~~~~~--~------------------~~~---~l~~----~l~~~--------~~Dvi~~~~~~ 94 (342)
T 2iuy_A 62 ------------RPGLTVVPA--G------------------EPE---EIER----WLRTA--------DVDVVHDHSGG 94 (342)
T ss_dssp ------------STTEEECSC--C------------------SHH---HHHH----HHHHC--------CCSEEEECSSS
T ss_pred ------------CCcceeccC--C------------------cHH---HHHH----HHHhc--------CCCEEEECCch
Confidence 023322100 0 011 1111 11111 68999999876
Q ss_pred cchHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHH
Q 006091 301 AGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAI 380 (662)
Q Consensus 301 ~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 380 (662)
..+.. .+. .++| |+++|+.....
T Consensus 95 ~~~~~----~~~------~~~p-v~~~h~~~~~~---------------------------------------------- 117 (342)
T 2iuy_A 95 VIGPA----GLP------PGTA-FISSHHFTTRP---------------------------------------------- 117 (342)
T ss_dssp SSCST----TCC------TTCE-EEEEECSSSBC----------------------------------------------
T ss_pred hhHHH----Hhh------cCCC-EEEecCCCCCc----------------------------------------------
Confidence 54322 121 5899 99999752100
Q ss_pred HhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHh
Q 006091 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKEL 460 (662)
Q Consensus 381 ~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~l 460 (662)
..+|.++++|+..++.+.. ..++.+||||+|.+.|.+....
T Consensus 118 ~~~d~ii~~S~~~~~~~~~--------------~~~~~vi~ngvd~~~~~~~~~~------------------------- 158 (342)
T 2iuy_A 118 VNPVGCTYSSRAQRAHCGG--------------GDDAPVIPIPVDPARYRSAADQ------------------------- 158 (342)
T ss_dssp SCCTTEEESCHHHHHHTTC--------------CTTSCBCCCCBCGGGSCCSTTC-------------------------
T ss_pred ccceEEEEcCHHHHHHHhc--------------CCceEEEcCCCChhhcCccccc-------------------------
Confidence 0179999999998877641 4689999999998877654321
Q ss_pred CCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCC-ChHHHHHH
Q 006091 461 GLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRI 539 (662)
Q Consensus 461 gl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~l 539 (662)
. ++.++|+|+||+.+.||++.+++|++.+ +++|+|+|+|+ ....++.+......++. +.|+ +++++..+
T Consensus 159 -~---~~~~~i~~vG~~~~~Kg~~~li~a~~~~---~~~l~i~G~g~--~~~~l~~~~~~~~~~v~-~~g~~~~~~l~~~ 228 (342)
T 2iuy_A 159 -V---AKEDFLLFMGRVSPHKGALEAAAFAHAC---GRRLVLAGPAW--EPEYFDEITRRYGSTVE-PIGEVGGERRLDL 228 (342)
T ss_dssp -C---CCCSCEEEESCCCGGGTHHHHHHHHHHH---TCCEEEESCCC--CHHHHHHHHHHHTTTEE-ECCCCCHHHHHHH
T ss_pred -C---CCCCEEEEEeccccccCHHHHHHHHHhc---CcEEEEEeCcc--cHHHHHHHHHHhCCCEE-EeccCCHHHHHHH
Confidence 1 3457899999999999999999999998 89999999995 23333334333333333 4444 56667799
Q ss_pred HHhcCEEEEcCC----------CCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHH
Q 006091 540 TAGCDILLMPSR----------FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESML 609 (662)
Q Consensus 540 l~~aDi~v~PS~----------~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la 609 (662)
|+.||++++||. .|+||++++|||+||+|||+++.||+.|++.+. ++.+|+++++ |+++++
T Consensus 229 ~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~--------~~~~g~~~~~-d~~~l~ 299 (342)
T 2iuy_A 229 LASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSV--------GEVVGYGTDF-APDEAR 299 (342)
T ss_dssp HHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGG--------EEECCSSSCC-CHHHHH
T ss_pred HHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhccc--------CCCceEEcCC-CHHHHH
Confidence 999999999999 799999999999999999999999999999640 0368999999 999999
Q ss_pred HHHHHHHHHhhhCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhCCCC
Q 006091 610 TALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDPPY 660 (662)
Q Consensus 610 ~aI~~~l~~~~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy~~~~~~~~~ 660 (662)
++|.++++ .+.+++.+.++|+|++++++|.++|+++++.+.+
T Consensus 300 ~~i~~l~~---------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 341 (342)
T 2iuy_A 300 RTLAGLPA---------SDEVRRAAVRLWGHVTIAERYVEQYRRLLAGATW 341 (342)
T ss_dssp HHHHTSCC---------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHH---------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHccCCC
Confidence 99987763 2222333457899999999999999999987654
No 15
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=100.00 E-value=2e-34 Score=322.05 Aligned_cols=447 Identities=14% Similarity=0.138 Sum_probs=286.9
Q ss_pred EeecccCccccCcHHHHHhhHHHHHHhC-CCcEEEEeecCCCCCCcccchh----hhccc-------CceeEEeecCCce
Q 006091 157 VTAEAAPYSKTGGLGDVCGSLPVALAAR-GHRVMVVSPRYFNGTAADENFT----LAKDL-------GCCMKICCFGGEQ 224 (662)
Q Consensus 157 vs~~~~P~~~~GG~~~~~~~La~~L~~~-GheV~Vit~~~~~~~~~~~~~~----~~~~~-------~~~~~v~~~~~~~ 224 (662)
++.+-.. ++||+-++...-|..+.+. |-+...|.|...... ...+. ....+ .....-.......
T Consensus 33 ~swEV~N--kVGGIyTVl~tka~~~~~~~gd~y~~iGP~~~~~~--~~e~e~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 108 (725)
T 3nb0_A 33 TATEVAN--RVGGIYSVLKSKAPITVAQYKDHYHLIGPLNKATY--QNEVDILDWKKPEAFSDEMRPVQHALQTMESRGV 108 (725)
T ss_dssp EETTTTS--CSSHHHHHHHHHHHHHHHHHGGGEEEEEECCTTTH--HHHEEECCSSSGGGSCSTTHHHHHHHHHHHTTTC
T ss_pred eehhhhc--ccCCeEEEEecchhHHHHHhCCeEEEECCCCCCcC--CcceeecCCCCchhhcchhHHHHHHHHHHHHCCC
Confidence 4444333 6899999999999999886 999999988532211 11110 00000 0000000112223
Q ss_pred EEEEEEEeeCCceEEEE-eCCCCCCC-CCCCCCC----------CCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCcc
Q 006091 225 EIAFFHEYREGVDWVFV-DHPSYHRP-GNPYGDI----------NGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKC 292 (662)
Q Consensus 225 ~~~~~~~~~~gv~v~~i-~~~~~~~~-~~~y~~~----------~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pD 292 (662)
.+.+.+...+|-+.+.+ +...+... ...+.+. .+..-+...+|.+++.++++.+..+. .| .||
T Consensus 109 ~v~~GrW~i~G~P~viL~d~~~~~~~~~~~~~~lw~~~~i~s~~~yg~~dd~~~F~y~~~avl~~l~~~~--~~---~pd 183 (725)
T 3nb0_A 109 HFVYGRWLIEGAPKVILFDLDSVRGYSNEWKGDLWSLVGIPSPENDFETNDAILLGYTVAWFLGEVAHLD--SQ---HAI 183 (725)
T ss_dssp CEEEEEESSTTCCEEEEECSGGGGGGHHHHHHHHHHHHCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHC--CS---EEE
T ss_pred eEEEEEEecCCCceEEEEeChHHHHHHHHHHHHHHHHhCcCCCCcccchhHHHHHHHHHHHHHHHHHhcC--CC---CCc
Confidence 34445666777665544 54332211 0001000 01123566788888888777654331 13 699
Q ss_pred EEEeCCCCcchHHHHHHhhcCCCCCCCCCcEEEEecCCC---C---CCCCChhh-hhhcCCChhhhcccccccccccccc
Q 006091 293 IFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLS---H---QGVEPAAT-YKNLGLPSEWYGALEWVFPTWARTH 365 (662)
Q Consensus 293 VVh~h~~~~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~---~---~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~ 365 (662)
|+|+|+|++++++.+++... .++|+|+|+|++. + |+.++... +..++++.... .
T Consensus 184 IiH~HDW~tg~~~~~Lk~~~------~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~----------~--- 244 (725)
T 3nb0_A 184 VAHFHEWLAGVALPLCRKRR------IDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAG----------R--- 244 (725)
T ss_dssp EEEEESGGGCTHHHHHHHTT------CSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHH----------H---
T ss_pred EEEeCchhhhHHHHHHHHhC------CCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhh----------h---
Confidence 99999999999999998764 6899999999973 2 44433221 12222111100 0
Q ss_pred ccCcchhhhHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccc
Q 006091 366 ALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDD 445 (662)
Q Consensus 366 ~~~~~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~ 445 (662)
.......++++.++..||+|+|||+.+++++++ ++..+.+.+ ||||||+..|.|....
T Consensus 245 -~~i~~~~~~EKaga~~AD~ITTVS~~yA~Ei~~---------Ll~r~~d~i--IpNGID~~~f~p~~~~---------- 302 (725)
T 3nb0_A 245 -FGIYHRYCIERAAAHSADVFTTVSQITAFEAEH---------LLKRKPDGI--LPNGLNVIKFQAFHEF---------- 302 (725)
T ss_dssp -TTCHHHHHHHHHHHHHSSEEEESSHHHHHHHHH---------HTSSCCSEE--CCCCBCCCCCSSTTHH----------
T ss_pred -hchhHHHHHHHHHHHhCCEEEECCHHHHHHHHH---------HhcCCCCEE--EcCCccccccCcchhh----------
Confidence 012356789999999999999999999999963 444555544 9999999999875211
Q ss_pred cchhHHhHHHHHHHh------CCCCCCCC-CEEEEEecCC-CccCHHHHHHHHHhccC---------CCeEEEEEeCCCh
Q 006091 446 LSGKVQCKIALQKEL------GLPIRPDC-PLIGFIGRLD-YQKGIDLIRLAAPEILA---------DDIQFVMLGSGDP 508 (662)
Q Consensus 446 ~~~~~~~k~~~r~~l------gl~~~~~~-~~Il~vGrl~-~~Kg~d~Ll~A~~~l~~---------~d~~lvivG~g~~ 508 (662)
...+..+|.++++.+ +++.++++ ++|..+||++ .+||+|++++|+.+|.. .-+.|+|+..+..
T Consensus 303 ~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~ 382 (725)
T 3nb0_A 303 QNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNN 382 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEE
T ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCC
Confidence 234556666665554 44443344 4555579999 78999999999998852 1367888876621
Q ss_pred hh-------------------------------------------------H----------------------------
Q 006091 509 QF-------------------------------------------------E---------------------------- 511 (662)
Q Consensus 509 ~~-------------------------------------------------~---------------------------- 511 (662)
.. +
T Consensus 383 ~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~ 462 (725)
T 3nb0_A 383 SFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPI 462 (725)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCS
T ss_pred CCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCe
Confidence 10 0
Q ss_pred -----------HHHHHHHhh-------cCCcEEEEcCCC-hH------HHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcC
Q 006091 512 -----------SWMRDTEAT-------YKDKYRGWVGFN-VP------ISHRITAGCDILLMPSRFEPCGLNQLYAMRYG 566 (662)
Q Consensus 512 -----------~~~~~l~~~-------~~~~~~~~~~~~-~~------~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G 566 (662)
..+..++.. .+++++....+- .. ....+|+.||++|+||++|+||++++||||||
T Consensus 463 ~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G 542 (725)
T 3nb0_A 463 VTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMG 542 (725)
T ss_dssp BSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTT
T ss_pred eeeecccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcC
Confidence 000000110 012334333332 11 35689999999999999999999999999999
Q ss_pred CcEEEeCCcccccccccccccccCCCCccceEEEC---CCCHHHHHHHHHHHHHHhh-hCHHHHHHHHHHH--HHhcCCH
Q 006091 567 TIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFL---PLSEESMLTALRFAIRTYR-EHKSSWEGLMRRG--MEKDYTW 640 (662)
Q Consensus 567 ~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~---~~d~~~la~aI~~~l~~~~-~~~~~~~~l~~~~--~~~~fs~ 640 (662)
+|||+|+.||+.|+|.+.... ..++++|++|. +.|+++++++|.+++..+. .++..+.+++.++ +.+.|+|
T Consensus 543 ~PvI~s~~gG~~d~V~dg~~~---~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSW 619 (725)
T 3nb0_A 543 VPSITTNVSGFGSYMEDLIET---NQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDW 619 (725)
T ss_dssp CCEEEETTBHHHHHHHTTSCH---HHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBH
T ss_pred CCEEEeCCCChhhhhhccccc---cCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCH
Confidence 999999999999999871100 00024799883 5678889999988887654 3677777888777 4679999
Q ss_pred HHHHHHHHHHHHHhhh
Q 006091 641 ENAAIQYEQVFEWASI 656 (662)
Q Consensus 641 e~~a~~~~~iy~~~~~ 656 (662)
++++++|+++|+.++.
T Consensus 620 e~iA~~Yl~~Ye~aL~ 635 (725)
T 3nb0_A 620 KRMGLEYVKARQLALR 635 (725)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999999875
No 16
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.97 E-value=4e-32 Score=296.90 Aligned_cols=359 Identities=9% Similarity=0.013 Sum_probs=221.2
Q ss_pred CCceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEE
Q 006091 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAF 228 (662)
Q Consensus 149 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 228 (662)
..+|||++++..+.|....||.. .+.+|+++|+++||+|+|+|+.... ..+.. ...
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~-~v~~la~~L~~~GheV~Vvt~~~~~---~~~~~---~~~----------------- 99 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGIS-TALKLFEQFDNKKFKKRIILTDATP---NPKDL---QSF----------------- 99 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHH-HHHHHHTTSCTTTCEEEEEESSCCC---CHHHH---GGG-----------------
T ss_pred CCCceEEEEeCCCCccccccHHH-HHHHHHHHHHHcCCceEEEEecCCC---ChHHH---Hhh-----------------
Confidence 35799999999988842346664 5889999999999999999976421 00000 000
Q ss_pred EEEeeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHH
Q 006091 229 FHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 308 (662)
Q Consensus 229 ~~~~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll 308 (662)
.+.... + +.... .+ ...... +... .... ....+||+||+|.|.++.....+
T Consensus 100 -----~~~~~~--~---~~~~~-~~-------~~~i~~---~~~~-~~~~-------~~~~~~Dvv~a~~~~~~~~~~~~ 150 (413)
T 2x0d_A 100 -----KSFKYV--M---PEEDK-DF-------ALQIVP---FNDR-YNRT-------IPVAKHDIFIATAWWTAYAAQRI 150 (413)
T ss_dssp -----TTSEEC--C---TTCCC-CC-------SEEEEE---CSCC-TTCC-------EEECTTEEEEECSHHHHHHHHHH
T ss_pred -----hcccee--e---ccCCc-cc-------cceeee---cccc-cccc-------ccCCCCCEEEEehHHHHHHHHHh
Confidence 000000 0 00000 00 000000 0000 0000 00125899999988776555444
Q ss_pred HhhcC-CCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcC--E
Q 006091 309 ASKYR-PHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTAD--R 385 (662)
Q Consensus 309 ~~~~~-~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad--~ 385 (662)
..+.. ..+ ....|.++.+|++... + .... ....+.+..+..++ .
T Consensus 151 ~~~~~~~~~-~~~~~~~~~v~~~~~~-------~--~~~~-----------------------~~~~~~~~~~~~~~~~~ 197 (413)
T 2x0d_A 151 VSWQSDTYG-IPPNKILYIIQDFEPG-------F--YQWS-----------------------SQYVLAESTYKYRGPQI 197 (413)
T ss_dssp HHHHHHHHT-CCCCCEEEEECSCGGG-------G--SCSS-----------------------HHHHHHHHTTSCCSCEE
T ss_pred hhhhhhhcc-cccCcEEEEEeechhh-------c--CccC-----------------------hHHHHHHHHhccCCceE
Confidence 21100 000 0246788888875210 0 0000 00112233334444 5
Q ss_pred EEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCC
Q 006091 386 LLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIR 465 (662)
Q Consensus 386 ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~ 465 (662)
++++|+..++.+... +.+..++.+++||+|.+.|.+.. .+ .
T Consensus 198 vi~~S~~~~~~l~~~----------g~~~~~~~~i~~g~d~~~~~~~~--------------------------~~-~-- 238 (413)
T 2x0d_A 198 AVFNSELLKQYFNNK----------GYNFTDEYFFQPKINTTLKNYIN--------------------------DK-R-- 238 (413)
T ss_dssp EEEESHHHHHHHHHH----------TCCCSEEEEECCCCCHHHHTTTT--------------------------SC-C--
T ss_pred EEEcCHHHHHHHHHc----------CCCCCceEEeCCCcCchhhcccc--------------------------cc-c--
Confidence 889999999887531 22335688999999865433211 01 1
Q ss_pred CCCCEEEEEecC-CCccCHHHHHHHHHhccC--C---CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHH
Q 006091 466 PDCPLIGFIGRL-DYQKGIDLIRLAAPEILA--D---DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRI 539 (662)
Q Consensus 466 ~~~~~Il~vGrl-~~~Kg~d~Ll~A~~~l~~--~---d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 539 (662)
++.+.|+++||+ .+.||++.+++|++.+.+ + +++|+++|+|+... .+....++.+.|++ +.+++..+
T Consensus 239 ~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~~-----~l~~~~~v~f~G~~--~~~~l~~~ 311 (413)
T 2x0d_A 239 QKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKDI-----ALGKGIHLNSLGKL--TLEDYADL 311 (413)
T ss_dssp CCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCCE-----EEETTEEEEEEESC--CHHHHHHH
T ss_pred CCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCchhh-----hcCCcCcEEEcCCC--CHHHHHHH
Confidence 355788999996 689999999999999854 3 38999999986320 01111223444444 56778899
Q ss_pred HHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHh
Q 006091 540 TAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTY 619 (662)
Q Consensus 540 l~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~ 619 (662)
|+.||++++||.+|+||++++||||||+|||+++ +|..|++.+ +.+|+++++.|+++++++|..+++
T Consensus 312 ~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~~-~g~~e~v~~----------~~~G~lv~~~d~~~la~ai~~ll~-- 378 (413)
T 2x0d_A 312 LKRSSIGISLMISPHPSYPPLEMAHFGLRVITNK-YENKDLSNW----------HSNIVSLEQLNPENIAETLVELCM-- 378 (413)
T ss_dssp HHHCCEEECCCSSSSCCSHHHHHHHTTCEEEEEC-BTTBCGGGT----------BTTEEEESSCSHHHHHHHHHHHHH--
T ss_pred HHhCCEEEEecCCCCCCcHHHHHHhCCCcEEEeC-CCcchhhhc----------CCCEEEeCCCCHHHHHHHHHHHHc--
Confidence 9999999999999999999999999999999954 567899988 889999999999999999999987
Q ss_pred hhCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 006091 620 REHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASI 656 (662)
Q Consensus 620 ~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy~~~~~ 656 (662)
|++++++ ..+...+.|+|++++++ .++|++++.
T Consensus 379 --~~~~~~~-~~~~~~~~~~W~~~~~~-~~~~~~l~~ 411 (413)
T 2x0d_A 379 --SFNNRDV-DKKESSNMMFYINEFNE-FSFIKEIEE 411 (413)
T ss_dssp --HTC--------CCBSCGGGCCCC----TTHHHHHT
T ss_pred --CHHHHHH-hHHHHHHhCCHHHHHHH-HHHHHHHHh
Confidence 4444444 22223468999999877 667776654
No 17
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.96 E-value=4e-30 Score=280.55 Aligned_cols=202 Identities=13% Similarity=0.110 Sum_probs=154.0
Q ss_pred hHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhH
Q 006091 374 NVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCK 453 (662)
Q Consensus 374 ~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k 453 (662)
.+++.+++.+|.++++|+..++.+.. . . ++.+||||+|.+.|.+....
T Consensus 170 ~~~~~~~~~ad~vi~~S~~~~~~~~~------------~-~-~i~vipngvd~~~f~~~~~~------------------ 217 (406)
T 2hy7_A 170 REFDRVAPTLDVIALVSPAMAAEVVS------------R-D-NVFHVGHGVDHNLDQLGDPS------------------ 217 (406)
T ss_dssp HHHHHHGGGCSEEEESCGGGGGGCSC------------S-T-TEEECCCCBCTTHHHHHCSC------------------
T ss_pred HHHHHHHHhCCEEEEcCHHHHHHHHh------------c-C-CEEEEcCCcChHhcCccccc------------------
Confidence 45677888999999999998877642 1 1 89999999998766432110
Q ss_pred HHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCCh
Q 006091 454 IALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNV 533 (662)
Q Consensus 454 ~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 533 (662)
+ ..+.++|+|+||+.+.||+ ++++.+. .++++|+|+|+|+ .+.+....++.+.|++ +.
T Consensus 218 ---------~-~~~~~~i~~vGrl~~~Kg~---~~~l~~~-~~~~~l~ivG~g~------~~~~~l~~~V~f~G~~--~~ 275 (406)
T 2hy7_A 218 ---------P-YAEGIHAVAVGSMLFDPEF---FVVASKA-FPQVTFHVIGSGM------GRHPGYGDNVIVYGEM--KH 275 (406)
T ss_dssp ---------S-CCSSEEEEEECCTTBCHHH---HHHHHHH-CTTEEEEEESCSS------CCCTTCCTTEEEECCC--CH
T ss_pred ---------c-cCCCcEEEEEeccccccCH---HHHHHHh-CCCeEEEEEeCch------HHhcCCCCCEEEcCCC--CH
Confidence 1 0233789999999999999 4444332 3689999999985 1111111123333333 55
Q ss_pred HHHHHHHHhcCEEEEcCCCCCCcHHHHHHH-------HcCCcEEEeCCcccccccccccccccCCCCccceEE-ECCCCH
Q 006091 534 PISHRITAGCDILLMPSRFEPCGLNQLYAM-------RYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWS-FLPLSE 605 (662)
Q Consensus 534 ~~~~~ll~~aDi~v~PS~~E~fgl~~lEAm-------a~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l-~~~~d~ 605 (662)
+++..+|+.||++|+||..|+||++++||| |||+|||+|+. +.+ +.+|++ ++++|+
T Consensus 276 ~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~------v~~----------~~~G~l~v~~~d~ 339 (406)
T 2hy7_A 276 AQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA------VVG----------PYKSRFGYTPGNA 339 (406)
T ss_dssp HHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG------GTC----------SCSSEEEECTTCH
T ss_pred HHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh------ccc----------CcceEEEeCCCCH
Confidence 667899999999999999999999999999 99999999987 555 689999 999999
Q ss_pred HHHHHHHHHHHHHhhhCHHHHHHHHHHHHHhcCCHHHHHHHHHHH--HHHhhh
Q 006091 606 ESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQV--FEWASI 656 (662)
Q Consensus 606 ~~la~aI~~~l~~~~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~i--y~~~~~ 656 (662)
++++++|..+++ +++ + ...++|+|+.++++++++ |+++..
T Consensus 340 ~~la~ai~~ll~----~~~-~------~~~~~~sw~~~a~~~~~~~~y~~~~~ 381 (406)
T 2hy7_A 340 DSVIAAITQALE----APR-V------RYRQCLNWSDTTDRVLDPRAYPETRL 381 (406)
T ss_dssp HHHHHHHHHHHH----CCC-C------CCSCCCBHHHHHHHHHCGGGSGGGBS
T ss_pred HHHHHHHHHHHh----Ccc-h------hhhhcCCHHHHHHHHHHhhcccccCc
Confidence 999999999987 443 1 235789999999999999 987654
No 18
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.96 E-value=5.9e-29 Score=265.65 Aligned_cols=340 Identities=12% Similarity=-0.027 Sum_probs=221.2
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEEEEEE
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFH 230 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 230 (662)
+|||++++. + .||....+..|+++|+++||+|.|+++..... ....
T Consensus 6 ~mkIl~~~~---~---~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~---~~~~------------------------- 51 (364)
T 1f0k_A 6 GKRLMVMAG---G---TGGHVFPGLAVAHHLMAQGWQVRWLGTADRME---ADLV------------------------- 51 (364)
T ss_dssp -CEEEEECC---S---SHHHHHHHHHHHHHHHTTTCEEEEEECTTSTH---HHHG-------------------------
T ss_pred CcEEEEEeC---C---CccchhHHHHHHHHHHHcCCEEEEEecCCcch---hhhc-------------------------
Confidence 499999973 2 48899999999999999999999998763210 0000
Q ss_pred EeeCCceEEEEeCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHHHHh
Q 006091 231 EYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 310 (662)
Q Consensus 231 ~~~~gv~v~~i~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~ll~~ 310 (662)
...|++++.++...+.+.. .. ........+......+.+.++.. +||+||+|.....+...+++.
T Consensus 52 -~~~g~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~l~~~l~~~--------~pDvv~~~~~~~~~~~~~~~~ 116 (364)
T 1f0k_A 52 -PKHGIEIDFIRISGLRGKG-IK-----ALIAAPLRIFNAWRQARAIMKAY--------KPDVVLGMGGYVSGPGGLAAW 116 (364)
T ss_dssp -GGGTCEEEECCCCCCTTCC-HH-----HHHTCHHHHHHHHHHHHHHHHHH--------CCSEEEECSSTTHHHHHHHHH
T ss_pred -cccCCceEEecCCccCcCc-cH-----HHHHHHHHHHHHHHHHHHHHHhc--------CCCEEEEeCCcCchHHHHHHH
Confidence 0135666655433221110 00 00001111111112222222222 699999997554443334333
Q ss_pred hcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEEecC
Q 006091 311 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 390 (662)
Q Consensus 311 ~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS 390 (662)
. .++|+|++.|+.. +. + ..+...+.+|.+++++
T Consensus 117 ~-------~~~p~v~~~~~~~-----~~-----------~------------------------~~~~~~~~~d~v~~~~ 149 (364)
T 1f0k_A 117 S-------LGIPVVLHEQNGI-----AG-----------L------------------------TNKWLAKIATKVMQAF 149 (364)
T ss_dssp H-------TTCCEEEEECSSS-----CC-----------H------------------------HHHHHTTTCSEEEESS
T ss_pred H-------cCCCEEEEecCCC-----Cc-----------H------------------------HHHHHHHhCCEEEecC
Confidence 3 5799999999641 00 0 0112235789999877
Q ss_pred cchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCE
Q 006091 391 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 470 (662)
Q Consensus 391 ~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~ 470 (662)
+.. + + ++.+|+||+|...+.+.. .+++++++ ++.++
T Consensus 150 ~~~----------------~--~--~~~~i~n~v~~~~~~~~~----------------------~~~~~~~~--~~~~~ 185 (364)
T 1f0k_A 150 PGA----------------F--P--NAEVVGNPVRTDVLALPL----------------------PQQRLAGR--EGPVR 185 (364)
T ss_dssp TTS----------------S--S--SCEECCCCCCHHHHTSCC----------------------HHHHHTTC--CSSEE
T ss_pred hhh----------------c--C--CceEeCCccchhhcccch----------------------hhhhcccC--CCCcE
Confidence 532 1 1 577999999876554321 13456665 45564
Q ss_pred E-EEEecCCCccCHHHHHHHHHhccCCCeE-EEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEEE
Q 006091 471 I-GFIGRLDYQKGIDLIRLAAPEILADDIQ-FVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLM 548 (662)
Q Consensus 471 I-l~vGrl~~~Kg~d~Ll~A~~~l~~~d~~-lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~ 548 (662)
+ ++.|++.+.||.+.+++|++.+.+ +++ ++++|+|+ .+.+.+.+......++ .+.|+. +.+..+|+.||++|+
T Consensus 186 il~~~g~~~~~k~~~~li~a~~~l~~-~~~~l~i~G~~~--~~~l~~~~~~~~~~~v-~~~g~~-~~~~~~~~~ad~~v~ 260 (364)
T 1f0k_A 186 VLVVGGSQGARILNQTMPQVAAKLGD-SVTIWHQSGKGS--QQSVEQAYAEAGQPQH-KVTEFI-DDMAAAYAWADVVVC 260 (364)
T ss_dssp EEEECTTTCCHHHHHHHHHHHHHHGG-GEEEEEECCTTC--HHHHHHHHHHTTCTTS-EEESCC-SCHHHHHHHCSEEEE
T ss_pred EEEEcCchHhHHHHHHHHHHHHHhcC-CcEEEEEcCCch--HHHHHHHHhhcCCCce-EEecch-hhHHHHHHhCCEEEE
Confidence 4 455699999999999999999966 788 56788886 2333333333221222 234444 335689999999999
Q ss_pred cCCCCCCcHHHHHHHHcCCcEEEeCCcccc--------cccccccccccCCCCccceEEECCCC--HHHHHHHHHHHHHH
Q 006091 549 PSRFEPCGLNQLYAMRYGTIPVVHATGGLR--------DTVENFNPFAREGSGEGTGWSFLPLS--EESMLTALRFAIRT 618 (662)
Q Consensus 549 PS~~E~fgl~~lEAma~G~PvVas~~gg~~--------eii~~~~~~~~~~~~~~~G~l~~~~d--~~~la~aI~~~l~~ 618 (662)
|| + |++++|||+||+|||+++.+|.+ +++.+ ++|+++++.| +++++++|.++
T Consensus 261 ~s---g-~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-----------g~g~~~~~~d~~~~~la~~i~~l--- 322 (364)
T 1f0k_A 261 RS---G-ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-----------GAAKIIEQPQLSVDAVANTLAGW--- 322 (364)
T ss_dssp CC---C-HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-----------TSEEECCGGGCCHHHHHHHHHTC---
T ss_pred CC---c-hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-----------CcEEEeccccCCHHHHHHHHHhc---
Confidence 99 3 99999999999999999999875 35544 5699999988 99999888765
Q ss_pred hhhCHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHhhh
Q 006091 619 YREHKSSWEGLMRRGM--EKDYTWENAAIQYEQVFEWASI 656 (662)
Q Consensus 619 ~~~~~~~~~~l~~~~~--~~~fs~e~~a~~~~~iy~~~~~ 656 (662)
|++.++++++++. .+.|+|++++++|+++|++...
T Consensus 323 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~ 359 (364)
T 1f0k_A 323 ---SRETLLTMAERARAASIPDATERVANEVSRVARALEH 359 (364)
T ss_dssp ---CHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTTC--
T ss_pred ---CHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHh
Confidence 6788888888773 4689999999999999986543
No 19
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.95 E-value=7.2e-27 Score=259.30 Aligned_cols=295 Identities=14% Similarity=0.080 Sum_probs=197.0
Q ss_pred CccEEEeCCCCcchHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCc
Q 006091 290 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT 369 (662)
Q Consensus 290 ~pDVVh~h~~~~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 369 (662)
.+||||+|+++..+++.+++... .++|+++++|.. +|...... .++.
T Consensus 123 ~~DiV~vHdyhl~~l~~~lr~~~------~~~~i~~~~H~p-----fp~~~~~~-~lp~--------------------- 169 (482)
T 1uqt_A 123 DDDIIWIHDYHLLPFAHELRKRG------VNNRIGFFLHIP-----FPTPEIFN-ALPT--------------------- 169 (482)
T ss_dssp TTCEEEEESGGGTTHHHHHHHTT------CCSCEEEECCSC-----CCCHHHHT-TSTT---------------------
T ss_pred CCCEEEEECchHHHHHHHHHHhC------CCCcEEEEEcCC-----CCCHHHHh-hCcc---------------------
Confidence 46999999999999999888754 589999999974 22211100 0110
Q ss_pred chhhhHHHHHHHhcCEEEecCcchhhhhhcc---cCC-----cchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccC
Q 006091 370 GEAVNVLKGAIVTADRLLTVSKGYSWEITTV---EGG-----YGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHY 441 (662)
Q Consensus 370 ~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~---~~~-----~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~ 441 (662)
...+ ...+..+|.+...+..+.+.+... ..+ .+..+..+ ...++.+||||||++.|.+....
T Consensus 170 --~~~i-l~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~~~~~~~g-~~~~v~vip~GID~~~f~~~~~~------ 239 (482)
T 1uqt_A 170 --YDTL-LEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWG-KAFRTEVYPIGIEPKEIAKQAAG------ 239 (482)
T ss_dssp --HHHH-HHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETT-EEEEEEECCCCCCHHHHHHHHHS------
T ss_pred --HHHH-HHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccCCeEEECC-eEEEEEEEeccCCHHHHHHHhcC------
Confidence 0001 111223444444433333222100 000 00001111 34579999999998766431100
Q ss_pred cccccchhHHhHHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--C----CeEEEEEeCCC----hhhH
Q 006091 442 SIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D----DIQFVMLGSGD----PQFE 511 (662)
Q Consensus 442 ~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~----d~~lvivG~g~----~~~~ 511 (662)
..... ..+++++++ ++++|+++||+++.||++.+++|++.+.+ + +++|+++|.+. +.+.
T Consensus 240 -----~~~~~-~~~lr~~~~-----~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~ 308 (482)
T 1uqt_A 240 -----PLPPK-LAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQ 308 (482)
T ss_dssp -----CCCHH-HHHHHHHTT-----TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHH
T ss_pred -----cchHH-HHHHHHHhC-----CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCccchHHHH
Confidence 00011 346777776 46899999999999999999999998854 2 48899999631 2333
Q ss_pred HHHHHHHh---hcC--------CcEEEEcCC-ChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCC-----cEEEeCC
Q 006091 512 SWMRDTEA---TYK--------DKYRGWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGT-----IPVVHAT 574 (662)
Q Consensus 512 ~~~~~l~~---~~~--------~~~~~~~~~-~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~-----PvVas~~ 574 (662)
.+.+.+.+ ..+ ..+..+.+. +.+++.++|+.||++|+||..|+||++++||||||+ |+|+|+.
T Consensus 309 ~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~ 388 (482)
T 1uqt_A 309 DIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQF 388 (482)
T ss_dssp HHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETT
T ss_pred HHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECC
Confidence 33322221 111 123433343 567788999999999999999999999999999997 8999998
Q ss_pred cccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHH
Q 006091 575 GGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFE 652 (662)
Q Consensus 575 gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy~ 652 (662)
+|..+.+ + +|++++|.|+++++++|..+++ .++++++++++++ ..+.|+|+..+++|++.|+
T Consensus 389 ~G~~~~l-~------------~g~lv~p~d~~~lA~ai~~lL~---~~~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~ 452 (482)
T 1uqt_A 389 AGAANEL-T------------SALIVNPYDRDEVAAALDRALT---MSLAERISRHAEMLDVIVKNDINHWQECFISDLK 452 (482)
T ss_dssp BGGGGTC-T------------TSEEECTTCHHHHHHHHHHHHT---CCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCHHHh-C------------CeEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 8888777 3 6899999999999999999986 2456666776666 2457999999999999998
Q ss_pred Hh
Q 006091 653 WA 654 (662)
Q Consensus 653 ~~ 654 (662)
++
T Consensus 453 ~~ 454 (482)
T 1uqt_A 453 QI 454 (482)
T ss_dssp HS
T ss_pred hc
Confidence 87
No 20
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.95 E-value=2e-26 Score=261.47 Aligned_cols=212 Identities=10% Similarity=0.034 Sum_probs=158.6
Q ss_pred hcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhC
Q 006091 382 TADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELG 461 (662)
Q Consensus 382 ~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lg 461 (662)
.+|.++++|+.... + ..++.+|||.++.....+... +...++++|
T Consensus 328 ~~d~~i~~s~~~~~--------------~---~~~i~~ipn~~~~~~~~~~~~------------------~~~~r~~~~ 372 (568)
T 2vsy_A 328 LGDAFALPPALEPF--------------Y---SEHVLRLQGAFQPSDTSRVVA------------------EPPSRTQCG 372 (568)
T ss_dssp EECTTTSCTTTGGG--------------C---SSEEEECSSCSCCCCTTCCCC------------------CCCCTGGGT
T ss_pred EECCCcCCcccccC--------------C---cceeEcCCCcCCCCCCCCCCC------------------CCCCccccC
Confidence 46888888875332 1 268999999554322111110 012456778
Q ss_pred CCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--CCeEEEEEe-CCChhhHHHHHHHHhhcCC-cEEEEcCC-ChHHH
Q 006091 462 LPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLG-SGDPQFESWMRDTEATYKD-KYRGWVGF-NVPIS 536 (662)
Q Consensus 462 l~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG-~g~~~~~~~~~~l~~~~~~-~~~~~~~~-~~~~~ 536 (662)
++ ++ .+++++||+.+ ||++.+++|+..+.+ ++++|+|+| +|+ ..+.+.+.+...... ..+.+.|+ +.+++
T Consensus 373 ~~--~~-~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~~g~-~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~ 447 (568)
T 2vsy_A 373 LP--EQ-GVVLCCFNNSY-KLNPQSMARMLAVLREVPDSVLWLLSGPGE-ADARLRAFAHAQGVDAQRLVFMPKLPHPQY 447 (568)
T ss_dssp CC--TT-SCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCEEEEECCSTT-HHHHHHHHHHHTTCCGGGEEEECCCCHHHH
T ss_pred CC--CC-CEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcEEEEecCCHH-HHHHHHHHHHHcCCChhHEEeeCCCCHHHH
Confidence 76 33 45669999999 999999999999854 689999999 664 334444444433221 22334444 44567
Q ss_pred HHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEE-------eCCc-------ccccccccccccccCCCCccceEEECC
Q 006091 537 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVV-------HATG-------GLRDTVENFNPFAREGSGEGTGWSFLP 602 (662)
Q Consensus 537 ~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVa-------s~~g-------g~~eii~~~~~~~~~~~~~~~G~l~~~ 602 (662)
..+|+.||++|+||.+ +||++++|||+||+|||+ |+.| |++|+|.+
T Consensus 448 ~~~~~~adv~v~ps~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~------------------- 507 (568)
T 2vsy_A 448 LARYRHADLFLDTHPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVA------------------- 507 (568)
T ss_dssp HHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS-------------------
T ss_pred HHHHhcCCEEeeCCCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhcC-------------------
Confidence 7999999999999999 999999999999999999 9999 99988842
Q ss_pred CCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH-----HhcCCHHHHHHHHHHHHHHhhhCC
Q 006091 603 LSEESMLTALRFAIRTYREHKSSWEGLMRRGM-----EKDYTWENAAIQYEQVFEWASIDP 658 (662)
Q Consensus 603 ~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~~-----~~~fs~e~~a~~~~~iy~~~~~~~ 658 (662)
|+++++++|..++. |++.+.++++++. .+.|+|+.++++|+++|++++...
T Consensus 508 -~~~~la~~i~~l~~----~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~~ 563 (568)
T 2vsy_A 508 -DDAAFVAKAVALAS----DPAALTALHARVDVLRRASGVFHMDGFADDFGALLQALARRH 563 (568)
T ss_dssp -SHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHTT
T ss_pred -CHHHHHHHHHHHhc----CHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 79999999999987 8888999988763 267999999999999999998753
No 21
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=99.95 E-value=6.6e-26 Score=257.25 Aligned_cols=351 Identities=17% Similarity=0.161 Sum_probs=256.9
Q ss_pred CccEEEeCCCCcchHHH-HHHhhcCCCCC-----C--CCCcEEEEecCCCCCCC--CChhhhhhcC---------CChhh
Q 006091 290 EKCIFLVNDWHAGLVPV-LLASKYRPHGV-----Y--KDARSILVIHNLSHQGV--EPAATYKNLG---------LPSEW 350 (662)
Q Consensus 290 ~pDVVh~h~~~~~l~~~-ll~~~~~~~~~-----~--~gip~v~tiH~~~~~~~--~~~~~~~~~~---------l~~~~ 350 (662)
+||+||+|+||++++++ +++.....++. + ....+++|.|++.+++. ||...+..+- +..++
T Consensus 299 ~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~f 378 (796)
T 1l5w_A 299 DYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRF 378 (796)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CccEEEecCCccHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcHhhhhcCCHHHHHHHhHHHHHHHhccCHHH
Confidence 69999999999999888 55433100000 0 26889999999998886 5555443321 00101
Q ss_pred hccccccccc----cccccccCcchhhhHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCC
Q 006091 351 YGALEWVFPT----WARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDI 426 (662)
Q Consensus 351 ~~~~~~~~~~----~~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~ 426 (662)
...+...++. +.+. .+.....++|++.++..|+.|.+||+.+.+.+++..++ .++...+.++..|.|||+.
T Consensus 379 ~~~~~~~~~~~~~~~~~~-~i~~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~----~~~~~~p~k~~~iTNGI~~ 453 (796)
T 1l5w_A 379 KTLVEKTWPGDEKVWAKL-AVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLFP----EYHQLWPNKFHNVTNGITP 453 (796)
T ss_dssp HHHHHHHSTTCHHHHHHH-CSEETTEEEHHHHHHHHSSEEEESSHHHHHHHHHTTSH----HHHHHCGGGEEECCCCBCH
T ss_pred HHHHHHhcCCcHHHHhhh-hcccCCcccHHHHHHHhcCccccccHHHHHHHHhHHhh----HHHHhCccccCCCcCCCcH
Confidence 0011111100 1111 11123468999999999999999999999999876653 3445556789999999999
Q ss_pred CCC----CCCCchhhcccCc----------------ccc------c-chhHHhHHH----HHHHhCCCCCCCCCEEEEEe
Q 006091 427 TEW----NPSSDEHIASHYS----------------IDD------L-SGKVQCKIA----LQKELGLPIRPDCPLIGFIG 475 (662)
Q Consensus 427 ~~~----~~~~~~~i~~~~~----------------~~~------~-~~~~~~k~~----~r~~lgl~~~~~~~~Il~vG 475 (662)
..| +|..+..+...++ .++ + ..|..||.. +++++|++.+++.+.++++.
T Consensus 454 rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vk 533 (796)
T 1l5w_A 454 RRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIK 533 (796)
T ss_dssp HHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEES
T ss_pred HHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeee
Confidence 888 4544444545554 443 2 467788887 58999999999999999999
Q ss_pred cCCCccCHHH-HHHHHHhccC---------CCeEEEEEeCCChhhHHH------HHHHHh------hcCC--cEEEEcCC
Q 006091 476 RLDYQKGIDL-IRLAAPEILA---------DDIQFVMLGSGDPQFESW------MRDTEA------TYKD--KYRGWVGF 531 (662)
Q Consensus 476 rl~~~Kg~d~-Ll~A~~~l~~---------~d~~lvivG~g~~~~~~~------~~~l~~------~~~~--~~~~~~~~ 531 (662)
|+..+||+++ ++.++..+.+ .+++|++.|.+.|.++.. +..++. ..+. +++....|
T Consensus 534 Rl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY 613 (796)
T 1l5w_A 534 RLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDY 613 (796)
T ss_dssp CCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSC
T ss_pred cchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCC
Confidence 9999999999 8888887754 479999999998766654 555554 3344 78878889
Q ss_pred ChHHHHHHHHhcCEEEEcCC--CCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHH
Q 006091 532 NVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESML 609 (662)
Q Consensus 532 ~~~~~~~ll~~aDi~v~PS~--~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la 609 (662)
+....+.++++||++++||+ +|+||++.|-||..|++.|++--|...|+.++ .+.+|||+|-. +++++.
T Consensus 614 ~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~--------vG~~NgF~FG~-~~~ev~ 684 (796)
T 1l5w_A 614 CVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEK--------VGEENIFIFGH-TVEQVK 684 (796)
T ss_dssp CHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHH--------HCGGGSEECSC-CHHHHH
T ss_pred CHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeeehhhc--------cCCCcEEEecC-CHHHHH
Confidence 99999999999999999999 99999999999999999998888888877644 12579999976 777666
Q ss_pred ---HHHHHHHHHhhhCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 006091 610 ---TALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASI 656 (662)
Q Consensus 610 ---~aI~~~l~~~~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy~~~~~ 656 (662)
.+.......+..++ .++++..+.+...|+|+.. .+|..+|+.++.
T Consensus 685 ~l~~~~y~a~~~y~~~~-~~~~vvd~~~~g~fs~~~~-~~y~~Ly~~L~~ 732 (796)
T 1l5w_A 685 AILAKGYDPVKWRKKDK-VLDAVLKELESGKYSDGDK-HAFDQMLHSIGK 732 (796)
T ss_dssp HHHHHCCCHHHHHHHCH-HHHHHHHHHHHTTTTTTCT-TTTHHHHHHTST
T ss_pred HHHHcccCHHHHhhcCH-HHHHHHHHHHcCCCCCCcH-HHHHHHHHHHhc
Confidence 33333444444566 6888888888899999886 789999998864
No 22
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=99.95 E-value=3.5e-26 Score=259.50 Aligned_cols=471 Identities=14% Similarity=0.062 Sum_probs=312.1
Q ss_pred ccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhccc------------------CceeEEeecCCceEEE
Q 006091 166 KTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDL------------------GCCMKICCFGGEQEIA 227 (662)
Q Consensus 166 ~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~------------------~~~~~v~~~~~~~~~~ 227 (662)
..||+|+.+....+.++..|....-++..|..+...+.. ...++. ...+.|++.|.....-
T Consensus 112 gnGGLGrLAac~ldS~a~l~~p~~G~Gl~Y~~G~F~Q~i-~dG~Q~E~~d~wl~~g~pwe~~r~~~~~~V~f~g~~v~a~ 190 (796)
T 2c4m_A 112 GNGGLGRLAACFLDSAVTQDYPVTGYGLLYRFGLFRQSF-NEGFQVEKPDPWREEEYPFTIRRASDQLVVCFDDMKTRAI 190 (796)
T ss_dssp CCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEE-ETTEEEEECCCSSSSCCTTSEECGGGCEEEEETTEEEEEE
T ss_pred CCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeEEEe-eCCEEEeeCCccccCCCceeEecCCcEEEEEeCCEEEEEE
Confidence 589999999999999999999999999988776543322 111111 1122333333211111
Q ss_pred EEEEeeCC--------ceEEEEeCCC-CC-----CCC----------------CCCCCCCCC--CCchhHHHHHHHHHHh
Q 006091 228 FFHEYREG--------VDWVFVDHPS-YH-----RPG----------------NPYGDINGA--FGDNQFRYTLLCYAAC 275 (662)
Q Consensus 228 ~~~~~~~g--------v~v~~i~~~~-~~-----~~~----------------~~y~~~~~~--~~~~~~~~~~~~~a~~ 275 (662)
.+.....| ++++...... |. ... .+|+..... -.-.+.+-..|+.+.+
T Consensus 191 ~yd~pi~gy~~~~~n~lrlW~a~~~~~f~l~~fn~gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~l 270 (796)
T 2c4m_A 191 PYDMPITGYGTHNVGTLRLWKAEPWEEFDYDAFNAQRFTDAIIERERVSDICRVLYPNDTTYEGKKLRVRQQYFFTSASL 270 (796)
T ss_dssp EEEEEECCTTCCCCEEEEEEEEEESSSSCHHHHHTTCHHHHHHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccccCcCCCceEEEEEEecccccccchhhccCcchhhhhhchHhhhchhhcCcCCCCCcchHHHHHHhHHHHHHHHH
Confidence 11111111 2233332211 21 100 133321000 0111223345556655
Q ss_pred hh-cccc-----CCCCCCCCCccEEEeCCCCcchHHH-HHHhhcCCCCC-----C--CCCcEEEEecCCCCCCC--CChh
Q 006091 276 EA-PLVL-----PLGGFTYGEKCIFLVNDWHAGLVPV-LLASKYRPHGV-----Y--KDARSILVIHNLSHQGV--EPAA 339 (662)
Q Consensus 276 ~~-~~~~-----~~~~f~~~~pDVVh~h~~~~~l~~~-ll~~~~~~~~~-----~--~gip~v~tiH~~~~~~~--~~~~ 339 (662)
+. ++.. .+..+ .+||+||+|+||++++++ +++.....++. + ....+++|.|++.+++. ||..
T Consensus 271 q~ilr~~~~~~~~l~~l--~~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~ 348 (796)
T 2c4m_A 271 QAMIQDHLAHHKDLSNF--AEFHSVQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQ 348 (796)
T ss_dssp HHHHHHHHHHSSCSTTH--HHHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHH
T ss_pred HHHHHHHHHhCCChhhc--CCCeEEEeCCChHHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCCHH
Confidence 53 2211 11111 169999999999999888 55432100000 0 24689999999999886 6655
Q ss_pred hhhhcC---------CChhhhccccccccc-c---ccccccCcchhhhHHHHHHHhcCEEEecCcchhhhhhcccCCcch
Q 006091 340 TYKNLG---------LPSEWYGALEWVFPT-W---ARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGL 406 (662)
Q Consensus 340 ~~~~~~---------l~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l 406 (662)
.+..+- +...++..+... +. + .++ .+.....++|++.++..|+.|.+||+.+.+.+++..++
T Consensus 349 l~~~~lpr~~~ii~~I~~~~~~~~~~~-~~~~~~~~~~-~i~~~~~vnMa~lai~~S~~VNgVS~lHae~ik~~~f~--- 423 (796)
T 2c4m_A 349 IFQQLFWRVWEIIAEIDRRFRLERAAD-GLDEETINRM-APIQHGTVHMAWIACYAAYSINGVAALHTEIIKAETLA--- 423 (796)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHT-TCCHHHHHHH-CSEETTEEEHHHHHHHHCSEEEESSHHHHHHHHHTTTH---
T ss_pred HHHHHhHHHHHHHcCcCHHHHHHHHhc-CCcHhhhhcc-cceeCCcccHHHHHHHhcCceeeccHHHHHHhhhhhhh---
Confidence 543321 111111100000 00 0 010 11123468999999999999999999999999876553
Q ss_pred hhhhccCCCceeEecCCCCCCCC----CCCCchhhcccCc-----------------ccc-------cchhHHhHHH---
Q 006091 407 HEILSSRKSVLNGITNGIDITEW----NPSSDEHIASHYS-----------------IDD-------LSGKVQCKIA--- 455 (662)
Q Consensus 407 ~~~~~~~~~ki~vIpnGvd~~~~----~~~~~~~i~~~~~-----------------~~~-------~~~~~~~k~~--- 455 (662)
.++...+.++..|.|||+...| +|..+..+...++ .++ ...|..||..
T Consensus 424 -~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~ 502 (796)
T 2c4m_A 424 -DWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAE 502 (796)
T ss_dssp -HHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHH
T ss_pred -hHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3344556789999999999999 4544444444444 444 2567788888
Q ss_pred -HHHHhCCCCCCCCCEEEEEecCCCccCHHH-HHHHHHhccC---------CCeEEEEEeCCChhhHHH------HHHHH
Q 006091 456 -LQKELGLPIRPDCPLIGFIGRLDYQKGIDL-IRLAAPEILA---------DDIQFVMLGSGDPQFESW------MRDTE 518 (662)
Q Consensus 456 -~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~-Ll~A~~~l~~---------~d~~lvivG~g~~~~~~~------~~~l~ 518 (662)
+++++|++.+++.+.++++.|+..+||+++ ++..+.++.+ .+++|++.|.+.|.++.. +..++
T Consensus 503 ~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va 582 (796)
T 2c4m_A 503 WILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGYVRAKAIIKLINSIA 582 (796)
T ss_dssp HHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhHHHHHHHHHHHHHHH
Confidence 599999999999999999999999999999 8888877752 379999999998766654 55555
Q ss_pred h------hcCC--cEEEEcCCChHHHHHHHHhcCEEEEcCC--CCCCcHHHHHHHHcCCcEEEeCCcccccccccccccc
Q 006091 519 A------TYKD--KYRGWVGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFA 588 (662)
Q Consensus 519 ~------~~~~--~~~~~~~~~~~~~~~ll~~aDi~v~PS~--~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~ 588 (662)
. ..+. +++....|+....+.++++||++++||+ +|+||++.|-||..|++.|++--|...|+.++-
T Consensus 583 ~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~v---- 658 (796)
T 2c4m_A 583 DLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSV---- 658 (796)
T ss_dssp HHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHH----
T ss_pred HHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhc----
Confidence 4 3445 7888889999999999999999999999 999999999999999999998888888776441
Q ss_pred cCCCCccceEEECC--CCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 006091 589 REGSGEGTGWSFLP--LSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASI 656 (662)
Q Consensus 589 ~~~~~~~~G~l~~~--~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy~~~~~ 656 (662)
+.+|||+|-. .++.++... ......+..++ .++++..+.+...|+|+.. .+|..+|+.++.
T Consensus 659 ----G~~NgF~FG~~~~ev~~l~~~-y~a~~~y~~~~-~~~~vvd~~~~g~fs~~~~-~~y~~Ly~~L~~ 721 (796)
T 2c4m_A 659 ----GEENAYIFGARVEELPALRES-YKPYELYETVP-GLKRALDALDNGTLNDNNS-GLFYDLKHSLIH 721 (796)
T ss_dssp ----CGGGSEEESCCTTTHHHHHHT-CCHHHHHHHST-THHHHHHTTTSSSSCCTTC-CHHHHHHHHHHS
T ss_pred ----CCCcEEEecCchhhHHHHHHh-hChHHHhhcCH-HHHHHHHHHHcCCCCCCCH-HHHHHHHHHHHh
Confidence 2579999976 778877776 55655555566 5777777777889999887 789999999874
No 23
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.94 E-value=4.8e-27 Score=252.65 Aligned_cols=283 Identities=13% Similarity=0.024 Sum_probs=190.3
Q ss_pred CccEEEeCCC-CcchHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccC
Q 006091 290 EKCIFLVNDW-HAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALD 368 (662)
Q Consensus 290 ~pDVVh~h~~-~~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 368 (662)
+||+||+|+. ...+.+.+++ +. .++|+|++.|+......+ ..+
T Consensus 86 ~pDvv~~~~~~~~~~~~~~~a-~~------~~ip~v~~~~~~~~~~~~-----------~~~------------------ 129 (384)
T 1vgv_A 86 KPDVVLVHGDTTTTLATSLAA-FY------QRIPVGHVEAGLRTGDLY-----------SPW------------------ 129 (384)
T ss_dssp CCSEEEEETTCHHHHHHHHHH-HT------TTCCEEEESCCCCCSCTT-----------SST------------------
T ss_pred CCCEEEEeCCchHHHHHHHHH-HH------HCCCEEEEeccccccccc-----------CCC------------------
Confidence 7999999975 3344333333 33 589999998865210000 000
Q ss_pred cchhhhHHHHH-HHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCC-CCCCCCCCCchhhcccCccccc
Q 006091 369 TGEAVNVLKGA-IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGI-DITEWNPSSDEHIASHYSIDDL 446 (662)
Q Consensus 369 ~~~~~~~~k~~-~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGv-d~~~~~~~~~~~i~~~~~~~~~ 446 (662)
...+.+.. .+.+|.++++|+..++.+.. ++.++.++.+++||+ |...+.+...
T Consensus 130 ---~~~~~~~~~~~~~d~ii~~s~~~~~~l~~----------~g~~~~~i~vi~n~~~d~~~~~~~~~------------ 184 (384)
T 1vgv_A 130 ---PEEANRTLTGHLAMYHFSPTETSRQNLLR----------ENVADSRIFITGNTVIDALLWVRDQV------------ 184 (384)
T ss_dssp ---THHHHHHHHHTTCSEEEESSHHHHHHHHH----------TTCCGGGEEECCCHHHHHHHHHHHHT------------
T ss_pred ---chHhhHHHHHhhccEEEcCcHHHHHHHHH----------cCCChhhEEEeCChHHHHHHhhhhcc------------
Confidence 00112233 34599999999988877642 234457899999995 4211110000
Q ss_pred chhHHhHHHHHHHhC-CCCCCCCCEEEEEecCCCc-cCHHHHHHHHHhccC--CCeEEEEE-eCCChhhHHHHHHHHhh-
Q 006091 447 SGKVQCKIALQKELG-LPIRPDCPLIGFIGRLDYQ-KGIDLIRLAAPEILA--DDIQFVML-GSGDPQFESWMRDTEAT- 520 (662)
Q Consensus 447 ~~~~~~k~~~r~~lg-l~~~~~~~~Il~vGrl~~~-Kg~d~Ll~A~~~l~~--~d~~lviv-G~g~~~~~~~~~~l~~~- 520 (662)
......+.++++++| ++. .+..+++++||+.+. ||++.+++|++.+.+ ++++|+++ |.+ +...+.++.+...
T Consensus 185 ~~~~~~~~~~~~~~~~~~~-~~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~~-~~~~~~l~~~~~~~ 262 (384)
T 1vgv_A 185 MSSDKLRSELAANYPFIDP-DKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLN-PNVREPVNRILGHV 262 (384)
T ss_dssp TTCHHHHHHHHTTCTTCCT-TSEEEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBC-HHHHHHHHHHHTTC
T ss_pred ccchhhhHHHHHhccccCC-CCCEEEEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCCC-HHHHHHHHHHhhcC
Confidence 000001235667777 641 233578899999886 999999999999865 58999886 444 3333334333221
Q ss_pred cCCcEEEEcCCChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCC-cccccccccccccccCCCCccceEE
Q 006091 521 YKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT-GGLRDTVENFNPFAREGSGEGTGWS 599 (662)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~-gg~~eii~~~~~~~~~~~~~~~G~l 599 (662)
.++.+.+++++ +.+..+|+.||++|+|| |.+++|||+||+|||+++. |+..|++.+ + +|++
T Consensus 263 ~~v~~~g~~~~--~~~~~~~~~ad~~v~~S-----g~~~lEA~a~G~PvI~~~~~~~~~e~v~~----------g-~g~l 324 (384)
T 1vgv_A 263 KNVILIDPQEY--LPFVWLMNHAWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTA----------G-TVRL 324 (384)
T ss_dssp TTEEEECCCCH--HHHHHHHHHCSEEEESS-----STGGGTGGGGTCCEEEESSCCSCHHHHHH----------T-SEEE
T ss_pred CCEEEeCCCCH--HHHHHHHHhCcEEEECC-----cchHHHHHHcCCCEEEccCCCCcchhhhC----------C-ceEE
Confidence 23344444554 45779999999999999 4458999999999999986 999999987 5 9999
Q ss_pred ECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHhhhCC
Q 006091 600 FLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWASIDP 658 (662)
Q Consensus 600 ~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy~~~~~~~ 658 (662)
+++ |+++++++|.++++ |++.+++|++++ +...|+|+++++.+.++|++..+..
T Consensus 325 v~~-d~~~la~~i~~ll~----d~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 380 (384)
T 1vgv_A 325 VGT-DKQRIVEEVTRLLK----DENEYQAMSRAHNPYGDGQACSRILEALKNNRISLGSHH 380 (384)
T ss_dssp ECS-SHHHHHHHHHHHHH----CHHHHHHHHSSCCTTCCSCHHHHHHHHHHHTCCCC----
T ss_pred eCC-CHHHHHHHHHHHHh----ChHHHhhhhhccCCCcCCCHHHHHHHHHHHHHHhhcccc
Confidence 987 99999999999987 888899988766 3467999999999999988776543
No 24
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.94 E-value=4.5e-26 Score=244.07 Aligned_cols=217 Identities=15% Similarity=0.051 Sum_probs=158.7
Q ss_pred HhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCC-CCCCCCCCCCchhhcccCcccccchhHHhHHHHHHH
Q 006091 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG-IDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 459 (662)
Q Consensus 381 ~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnG-vd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~ 459 (662)
+.+|.++++|+..++.+.. ++.+++++.+|+|| +|...+.+.... +..++++
T Consensus 149 ~~~d~ii~~s~~~~~~~~~----------~g~~~~~i~vi~n~~~d~~~~~~~~~~-----------------~~~~~~~ 201 (375)
T 3beo_A 149 VMADLHFSPTAKSATNLQK----------ENKDESRIFITGNTAIDALKTTVKETY-----------------SHPVLEK 201 (375)
T ss_dssp HHCSEEEESSHHHHHHHHH----------TTCCGGGEEECCCHHHHHHHHHCCSSC-----------------CCHHHHT
T ss_pred hhhheeeCCCHHHHHHHHH----------cCCCcccEEEECChhHhhhhhhhhhhh-----------------hHHHHHh
Confidence 4599999999988877642 23455789999999 776544322100 1123444
Q ss_pred hCCCCCCCCCEEEEEecCCCc-cCHHHHHHHHHhccC--CCeEEEEEeCCC-hhhHHHHHHHHhh-cCCcEEEEcCCChH
Q 006091 460 LGLPIRPDCPLIGFIGRLDYQ-KGIDLIRLAAPEILA--DDIQFVMLGSGD-PQFESWMRDTEAT-YKDKYRGWVGFNVP 534 (662)
Q Consensus 460 lgl~~~~~~~~Il~vGrl~~~-Kg~d~Ll~A~~~l~~--~d~~lvivG~g~-~~~~~~~~~l~~~-~~~~~~~~~~~~~~ 534 (662)
+ + ++..+++++||+.+. ||++.+++|++.+.+ +++++++ |.|+ +.+.+.++.+... .++.+.++++ ..
T Consensus 202 ~--~--~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~~i~-~~g~~~~~~~~~~~~~~~~~~v~~~g~~~--~~ 274 (375)
T 3beo_A 202 L--G--NNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQVVY-PVHMNPVVRETANDILGDYGRIHLIEPLD--VI 274 (375)
T ss_dssp T--T--TSEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEEEEE-ECCSCHHHHHHHHHHHTTCTTEEEECCCC--HH
T ss_pred c--c--CCCeEEEEecccccchhHHHHHHHHHHHHHhhCCCeEEEE-eCCCCHHHHHHHHHHhhccCCEEEeCCCC--HH
Confidence 3 2 345577899999876 999999999999865 5788655 6553 2223333333111 2334444453 33
Q ss_pred HHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeC-CcccccccccccccccCCCCccceEEECCCCHHHHHHHHH
Q 006091 535 ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA-TGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALR 613 (662)
Q Consensus 535 ~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~-~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~ 613 (662)
.+..+|+.||++|+|| |.+++|||+||+|||+++ .||.+|++.+ + +|+++++ |+++++++|.
T Consensus 275 ~~~~~~~~ad~~v~~s-----g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~----------g-~g~~v~~-d~~~la~~i~ 337 (375)
T 3beo_A 275 DFHNVAARSYLMLTDS-----GGVQEEAPSLGVPVLVLRDTTERPEGIEA----------G-TLKLAGT-DEETIFSLAD 337 (375)
T ss_dssp HHHHHHHTCSEEEECC-----HHHHHHHHHHTCCEEECSSCCSCHHHHHT----------T-SEEECCS-CHHHHHHHHH
T ss_pred HHHHHHHhCcEEEECC-----CChHHHHHhcCCCEEEecCCCCCceeecC----------C-ceEEcCC-CHHHHHHHHH
Confidence 5778999999999999 778999999999999996 4999999887 5 9999986 9999999999
Q ss_pred HHHHHhhhCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHH
Q 006091 614 FAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFE 652 (662)
Q Consensus 614 ~~l~~~~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy~ 652 (662)
++++ |++.+++|++++ +.+.|+|+++++.+.++++
T Consensus 338 ~ll~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 338 ELLS----DKEAHDKMSKASNPYGDGRASERIVEAILKHFN 374 (375)
T ss_dssp HHHH----CHHHHHHHCCCCCTTCCSCHHHHHHHHHHHHTT
T ss_pred HHHh----ChHhHhhhhhcCCCCCCCcHHHHHHHHHHHHhh
Confidence 9987 888888888766 3467999999999988763
No 25
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.93 E-value=5.4e-24 Score=234.26 Aligned_cols=286 Identities=15% Similarity=0.129 Sum_probs=204.2
Q ss_pred ccEEEeCCCCcchHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcc
Q 006091 291 KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTG 370 (662)
Q Consensus 291 pDVVh~h~~~~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 370 (662)
-|+|.+||+|..++|.+++.+. ++.++.+.+|.. ||... .+..+.+. |
T Consensus 150 ~D~VwVhDYhL~llp~~lR~~~------~~~~igfFlHiP-----fPs~e---------~f~~Lp~~---~--------- 197 (496)
T 3t5t_A 150 DPVYLVHDYQLVGVPALLREQR------PDAPILLFVHIP-----WPSAD---------YWRILPKE---I--------- 197 (496)
T ss_dssp SCEEEEESGGGTTHHHHHHHHC------TTSCEEEECCSC-----CCCHH---------HHTTSCHH---H---------
T ss_pred CCEEEEeCccHhHHHHHHHhhC------CCCeEEEEEcCC-----CCCHH---------HHhhCcHh---H---------
Confidence 5899999999999999999876 789999999975 23222 22111100 0
Q ss_pred hhhhHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhh--------------ccCCCceeEecCCCCCCCCCCCCchh
Q 006091 371 EAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEIL--------------SSRKSVLNGITNGIDITEWNPSSDEH 436 (662)
Q Consensus 371 ~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~--------------~~~~~ki~vIpnGvd~~~~~~~~~~~ 436 (662)
..-+-..+..+|.|.+-+..+.+.+... +...+ .....++.++|+|||+..|.+....
T Consensus 198 --r~ell~gll~~DligF~t~~y~~~Fl~~-----~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~- 269 (496)
T 3t5t_A 198 --RTGILHGMLPATTIGFFADRWCRNFLES-----VADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQ- 269 (496)
T ss_dssp --HHHHHHHHTTSSEEEESSHHHHHHHHHH-----HHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CC-
T ss_pred --HHHHHHHHHhCCEEEEecHHHHHHHHHH-----HHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHH-
Confidence 1123345668999999998887654321 01111 1123478899999999888754321
Q ss_pred hcccCcccccchhHHhHHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--C---CeEEEEEeCC----C
Q 006091 437 IASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D---DIQFVMLGSG----D 507 (662)
Q Consensus 437 i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~---d~~lvivG~g----~ 507 (662)
.+.+++++++ ++++|+++||+++.||++.+++|+ ++.+ + ++.|+++|.. .
T Consensus 270 ---------------~~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~ 328 (496)
T 3t5t_A 270 ---------------LPEGIEEWAD-----GHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNRLYV 328 (496)
T ss_dssp ---------------CCTTHHHHHT-----TSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCCTTS
T ss_pred ---------------HHHHHHHHhC-----CceEEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCCCCc
Confidence 0135677776 478999999999999999999999 7754 3 3678888742 1
Q ss_pred hhhHHHHHHHHh---hc-------CCcEEEEcCCChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcC---CcEEEeCC
Q 006091 508 PQFESWMRDTEA---TY-------KDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYG---TIPVVHAT 574 (662)
Q Consensus 508 ~~~~~~~~~l~~---~~-------~~~~~~~~~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G---~PvVas~~ 574 (662)
+.+..+.+.+.+ .. .+.+.+.+ +.+++.++|+.||++++||..||||++++|||||| .|+|+|+.
T Consensus 329 ~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~v--~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~ 406 (496)
T 3t5t_A 329 PANADYVHRVETAVAEANAELGSDTVRIDNDN--DVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSET 406 (496)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTSEEEEECC--CHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETT
T ss_pred hHHHHHHHHHHHHHHHhccccCCcCEEEeCCC--CHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCC
Confidence 334333333322 11 23344333 56667899999999999999999999999999996 89999999
Q ss_pred cccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHH
Q 006091 575 GGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFE 652 (662)
Q Consensus 575 gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy~ 652 (662)
+|..+.+.+ +|++|+|.|++++|++|..+++. .+++++++.++. ....+++..-++.+++-+.
T Consensus 407 aGa~~~l~~------------~allVnP~D~~~lA~AI~~aL~m---~~~er~~r~~~~~~~V~~~d~~~W~~~fl~~L~ 471 (496)
T 3t5t_A 407 CGAAEVLGE------------YCRSVNPFDLVEQAEAISAALAA---GPRQRAEAAARRRDAARPWTLEAWVQAQLDGLA 471 (496)
T ss_dssp BTTHHHHGG------------GSEEECTTBHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHTTCBHHHHHHHHHHHHH
T ss_pred CCCHHHhCC------------CEEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHh
Confidence 999988844 79999999999999999999983 445555555554 3578999999999988877
Q ss_pred Hh
Q 006091 653 WA 654 (662)
Q Consensus 653 ~~ 654 (662)
.+
T Consensus 472 ~~ 473 (496)
T 3t5t_A 472 AD 473 (496)
T ss_dssp HH
T ss_pred hc
Confidence 65
No 26
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=99.92 E-value=1.2e-24 Score=247.84 Aligned_cols=352 Identities=16% Similarity=0.164 Sum_probs=251.8
Q ss_pred CccEEEeCCCCcchHHH-HHHhhcCCCCC-----C--CCCcEEEEecCCCCCCC--CChhhhhhcC---------CChhh
Q 006091 290 EKCIFLVNDWHAGLVPV-LLASKYRPHGV-----Y--KDARSILVIHNLSHQGV--EPAATYKNLG---------LPSEW 350 (662)
Q Consensus 290 ~pDVVh~h~~~~~l~~~-ll~~~~~~~~~-----~--~gip~v~tiH~~~~~~~--~~~~~~~~~~---------l~~~~ 350 (662)
+||+||+|+||++++++ +++.....++. + ....+++|.|++.+++. |+...+..+- +...+
T Consensus 320 ~p~viHlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~HTl~~eglE~wp~~l~~~lLPr~~~ii~~in~~f 399 (824)
T 2gj4_A 320 DKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQRF 399 (824)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCcEEEccCCchHhHHHHHHHHHHHhcCCCHHHHHHHhcCcEEEEeCCChHHHhhhchHHHHHHhCchHHHHHHHHHHHH
Confidence 58899999999999888 55432210000 0 12349999999999988 7766554421 01111
Q ss_pred hccccccccc----cccccccC--cchhhhHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCC
Q 006091 351 YGALEWVFPT----WARTHALD--TGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGI 424 (662)
Q Consensus 351 ~~~~~~~~~~----~~~~~~~~--~~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGv 424 (662)
+......++. +.++..+. ....++|++.++..|+.|.+||+.+.+.+++..++ .++...+.++..|.|||
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~----~~~~~~p~k~~~iTNGI 475 (824)
T 2gj4_A 400 LNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFK----DFYELEPHKFQNKTNGI 475 (824)
T ss_dssp HHHHHHHSTTCHHHHHHHCSEECSSSCEEEHHHHHHHTCSCEEESSHHHHHHHHHTTTH----HHHHHCGGGEEECCCCB
T ss_pred HHHHHHHcCCcHHHHHhhhhhhhcCCCcccHHHHHHHhcCceeeEcHHHHHHHhhHHhH----HHHHcChhhcccccCCc
Confidence 1111111111 11222222 24578999999999999999999999999876553 34445578999999999
Q ss_pred CCCCC----CCCCchhhccc-----------------Ccc-ccc-----chhHHhHHH----HHHHhCCCCCCCCCEEEE
Q 006091 425 DITEW----NPSSDEHIASH-----------------YSI-DDL-----SGKVQCKIA----LQKELGLPIRPDCPLIGF 473 (662)
Q Consensus 425 d~~~~----~~~~~~~i~~~-----------------~~~-~~~-----~~~~~~k~~----~r~~lgl~~~~~~~~Il~ 473 (662)
+...| +|..+..|... |.. +++ ..|..+|.. ++++.|++.+++.+.+++
T Consensus 476 ~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~ 555 (824)
T 2gj4_A 476 TPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQ 555 (824)
T ss_dssp CTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEE
T ss_pred ChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEee
Confidence 99999 44333233222 443 223 356777776 888999999899999999
Q ss_pred EecCCCccCHHHH-HHHHHhcc----CC-----CeEEEEEeCCChhhHHH------HHHHHhhc------CC--cEEEEc
Q 006091 474 IGRLDYQKGIDLI-RLAAPEIL----AD-----DIQFVMLGSGDPQFESW------MRDTEATY------KD--KYRGWV 529 (662)
Q Consensus 474 vGrl~~~Kg~d~L-l~A~~~l~----~~-----d~~lvivG~g~~~~~~~------~~~l~~~~------~~--~~~~~~ 529 (662)
+.|+..+||++++ +..+..+. .+ +++|++.|.+.|.++.. +..++... +. +++...
T Consensus 556 vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~ 635 (824)
T 2gj4_A 556 VKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLE 635 (824)
T ss_dssp ESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEET
T ss_pred eecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEEC
Confidence 9999999999998 88887773 22 57999999998766654 55555433 33 788888
Q ss_pred CCChHHHHHHHHhcCEEEEcCC--CCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHH
Q 006091 530 GFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEES 607 (662)
Q Consensus 530 ~~~~~~~~~ll~~aDi~v~PS~--~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~ 607 (662)
.|+....+.++++||++++||+ +|+||++.|-||..|++.|++--|...|+.++. +.+|||+|... .++
T Consensus 636 nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi~e~v--------G~~Ngf~FG~~-~~e 706 (824)
T 2gj4_A 636 NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEA--------GEENFFIFGMR-VED 706 (824)
T ss_dssp TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHH--------CGGGSEECSCC-HHH
T ss_pred CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccchhhhcc--------CCCCEEEeCCc-HHH
Confidence 8999999999999999999999 999999999999999999999888777876421 15799999765 666
Q ss_pred HHHHHH----HHHHHhhhCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhC
Q 006091 608 MLTALR----FAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASID 657 (662)
Q Consensus 608 la~aI~----~~l~~~~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy~~~~~~ 657 (662)
+ .+++ +....+..+ +.++++..+.+...|+|... .+|..+|+.++..
T Consensus 707 v-~~l~~~~~~a~~~Y~~~-~~l~~v~d~i~~g~fs~~~~-~~y~~ly~~l~~~ 757 (824)
T 2gj4_A 707 V-DRLDQRGYNAQEYYDRI-PELRQIIEQLSSGFFSPKQP-DLFKDIVNMLMHH 757 (824)
T ss_dssp H-HHHHHHCCCHHHHHHHC-HHHHHHHHHHHHTTTCTTST-TTTHHHHHHHHHC
T ss_pred H-HHHHHcCCCHHHHhcCC-HHHHHHHHHHHhCCCCCCCh-HHHHHHHHHHHcC
Confidence 6 4542 233333334 45777777777899999887 7799999888753
No 27
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.91 E-value=1.3e-23 Score=204.93 Aligned_cols=184 Identities=29% Similarity=0.502 Sum_probs=146.6
Q ss_pred EecCCCCCCCCC--CCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCCCCEEEEEecCC-CccCHHHHHHHHHhcc-
Q 006091 419 GITNGIDITEWN--PSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLD-YQKGIDLIRLAAPEIL- 494 (662)
Q Consensus 419 vIpnGvd~~~~~--~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~~~~Il~vGrl~-~~Kg~d~Ll~A~~~l~- 494 (662)
.||||||.+.|. +.... ....+..++++++++ +.++|+|+|++. +.||++.+++|+..+.
T Consensus 1 gipngvd~~~f~~~~~~~~-------------~~~~~~~~r~~~~~~---~~~~i~~~G~~~~~~K~~~~li~a~~~l~~ 64 (200)
T 2bfw_A 1 GSHNGIDCSFWNESYLTGS-------------RDERKKSLLSKFGMD---EGVTFMFIGRFDRGQKGVDVLLKAIEILSS 64 (200)
T ss_dssp ----CCCTTTSSGGGSCSC-------------HHHHHHHHHHHTTCC---SCEEEEEESCBCSSSSCHHHHHHHHHHHTT
T ss_pred CCCCccChhhccccccccc-------------hhhHHHHHHHHcCCC---CCCEEEEeeccccccCCHHHHHHHHHHHHh
Confidence 389999999987 65420 112256789999987 456999999999 9999999999999985
Q ss_pred -C--CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCC-ChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEE
Q 006091 495 -A--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPV 570 (662)
Q Consensus 495 -~--~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvV 570 (662)
+ ++++|+|+|.+++.+...++.+..... ++....++ +.+.+..+|+.||++++||.+|+||++++|||+||+|||
T Consensus 65 ~~~~~~~~l~i~G~~~~~~~~~l~~~~~~~~-~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI 143 (200)
T 2bfw_A 65 KKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPI 143 (200)
T ss_dssp SGGGGGEEEEEECCBCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEE
T ss_pred hccCCCeEEEEECCCChHHHHHHHHHHHhcC-CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEE
Confidence 3 489999999987544555555544443 44321444 556678999999999999999999999999999999999
Q ss_pred EeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH
Q 006091 571 VHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG 633 (662)
Q Consensus 571 as~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~ 633 (662)
+++.+++.|++ + +.+|+++++.|+++++++|.++++. +++.+.++++++
T Consensus 144 ~~~~~~~~e~~-~----------~~~g~~~~~~~~~~l~~~i~~l~~~---~~~~~~~~~~~a 192 (200)
T 2bfw_A 144 ASAVGGLRDII-T----------NETGILVKAGDPGELANAILKALEL---SRSDLSKFRENC 192 (200)
T ss_dssp EESCHHHHHHC-C----------TTTCEEECTTCHHHHHHHHHHHHHC---CHHHHHHHHHHH
T ss_pred EeCCCChHHHc-C----------CCceEEecCCCHHHHHHHHHHHHhc---CHHHHHHHHHHH
Confidence 99999999999 7 7899999999999999999988751 788888888877
No 28
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.89 E-value=1.7e-22 Score=191.16 Aligned_cols=159 Identities=19% Similarity=0.242 Sum_probs=124.8
Q ss_pred CCEEEEEecCCCccCHHHHHHHHHhccC-CCeEEEEEeCCChhhHHHHHHHHhhcCCcEE-EEcCCChHHHHHHHHhcCE
Q 006091 468 CPLIGFIGRLDYQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKDKYR-GWVGFNVPISHRITAGCDI 545 (662)
Q Consensus 468 ~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~-~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~ll~~aDi 545 (662)
+++|+|+||+.+.||++.+++|+..+.+ ++++|+|+|+|+ .... ++.+......++. +++ +.+++..+|+.||+
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~-~~~~-~~~~~~~~~~~v~~g~~--~~~~~~~~~~~adv 77 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKGP-DEKK-IKLLAQKLGVKAEFGFV--NSNELLEILKTCTL 77 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTTGGGEEEEEECCST-THHH-HHHHHHHHTCEEECCCC--CHHHHHHHHTTCSE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhccCCCeEEEEEeCCc-cHHH-HHHHHHHcCCeEEEeec--CHHHHHHHHHhCCE
Confidence 4689999999999999999999999864 489999999985 2333 3333333332222 333 45677899999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCC-cEEE-eCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCH
Q 006091 546 LLMPSRFEPCGLNQLYAMRYGT-IPVV-HATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHK 623 (662)
Q Consensus 546 ~v~PS~~E~fgl~~lEAma~G~-PvVa-s~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~ 623 (662)
+++||.+|+||++++|||+||+ |||+ ++.|+..+++.+ +.+ ++++.|+++++++|.++++ ++
T Consensus 78 ~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~----------~~~--~~~~~~~~~l~~~i~~l~~----~~ 141 (166)
T 3qhp_A 78 YVHAANVESEAIACLEAISVGIVPVIANSPLSATRQFALD----------ERS--LFEPNNAKDLSAKIDWWLE----NK 141 (166)
T ss_dssp EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSS----------GGG--EECTTCHHHHHHHHHHHHH----CH
T ss_pred EEECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccC----------Cce--EEcCCCHHHHHHHHHHHHh----CH
Confidence 9999999999999999999998 9999 568899999987 444 7889999999999999987 88
Q ss_pred HHHHHHHHHH--HHhcCCHHHHHHH
Q 006091 624 SSWEGLMRRG--MEKDYTWENAAIQ 646 (662)
Q Consensus 624 ~~~~~l~~~~--~~~~fs~e~~a~~ 646 (662)
+.+.++++++ ..++|+|++++++
T Consensus 142 ~~~~~~~~~~~~~~~~~s~~~~~~~ 166 (166)
T 3qhp_A 142 LERERMQNEYAKSALNYTLENSVIQ 166 (166)
T ss_dssp HHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHHHHHCChhhhhcC
Confidence 8899998887 3588999998764
No 29
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.89 E-value=5.2e-23 Score=220.79 Aligned_cols=217 Identities=11% Similarity=-0.009 Sum_probs=152.2
Q ss_pred HHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCC-CCCCCCCCCchhhcccCcccccchhHHhHHHHHH
Q 006091 380 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGI-DITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK 458 (662)
Q Consensus 380 ~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGv-d~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~ 458 (662)
...+|.++++|+..++.+.. .+.+++++.+++|++ |...+.+. +.++++
T Consensus 144 ~~~~~~~~~~s~~~~~~l~~----------~g~~~~ki~vi~n~~~d~~~~~~~--------------------~~~~~~ 193 (376)
T 1v4v_A 144 DVLTDLDFAPTPLAKANLLK----------EGKREEGILVTGQTGVDAVLLAAK--------------------LGRLPE 193 (376)
T ss_dssp HHHCSEEEESSHHHHHHHHT----------TTCCGGGEEECCCHHHHHHHHHHH--------------------HCCCCT
T ss_pred HHHhceeeCCCHHHHHHHHH----------cCCCcceEEEECCchHHHHhhhhh--------------------hhHHHH
Confidence 35689999999988877642 234557899999975 42111000 000111
Q ss_pred HhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--CCeEEEEE-eCCChhhHHHHHHHHhh-cCCcEEEEcCCChH
Q 006091 459 ELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVML-GSGDPQFESWMRDTEAT-YKDKYRGWVGFNVP 534 (662)
Q Consensus 459 ~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lviv-G~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~~ 534 (662)
++ + ++.++++++||+...||++.+++|++.+.+ ++++++++ |+++ ...+.++..... .++.+.+.+++.
T Consensus 194 ~~--~--~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~-~~~~~l~~~~~~~~~v~~~g~~g~~-- 266 (376)
T 1v4v_A 194 GL--P--EGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNP-VVREAVFPVLKGVRNFVLLDPLEYG-- 266 (376)
T ss_dssp TC--C--SSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCH-HHHHHHHHHHTTCTTEEEECCCCHH--
T ss_pred hc--C--CCCEEEEEeCcccchHHHHHHHHHHHHHHhhCCCeEEEEECCCCH-HHHHHHHHHhccCCCEEEECCCCHH--
Confidence 12 1 234567789999888999999999999854 57898886 7663 223333333222 223344444433
Q ss_pred HHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEe-CCcccccccccccccccCCCCccceEEECCCCHHHHHHHHH
Q 006091 535 ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-ATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALR 613 (662)
Q Consensus 535 ~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas-~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~ 613 (662)
.+..+|+.||++|+|| + |+ ++|||+||+|+|++ +.++..+++.+ ++|++++ .|+++++++|.
T Consensus 267 ~~~~~~~~ad~~v~~S--~--g~-~lEA~a~G~PvI~~~~~~~~~~~~~~-----------g~g~lv~-~d~~~la~~i~ 329 (376)
T 1v4v_A 267 SMAALMRASLLLVTDS--G--GL-QEEGAALGVPVVVLRNVTERPEGLKA-----------GILKLAG-TDPEGVYRVVK 329 (376)
T ss_dssp HHHHHHHTEEEEEESC--H--HH-HHHHHHTTCCEEECSSSCSCHHHHHH-----------TSEEECC-SCHHHHHHHHH
T ss_pred HHHHHHHhCcEEEECC--c--CH-HHHHHHcCCCEEeccCCCcchhhhcC-----------CceEECC-CCHHHHHHHHH
Confidence 5678999999999999 2 44 88999999999997 57899998765 5899986 59999999999
Q ss_pred HHHHHhhhCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 006091 614 FAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASI 656 (662)
Q Consensus 614 ~~l~~~~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy~~~~~ 656 (662)
++++ |++.+++|+++ .+.|.+...++++.+++.+++.
T Consensus 330 ~ll~----d~~~~~~~~~~--~~~~~~~~~~~~i~~~i~~~~~ 366 (376)
T 1v4v_A 330 GLLE----NPEELSRMRKA--KNPYGDGKAGLMVARGVAWRLG 366 (376)
T ss_dssp HHHT----CHHHHHHHHHS--CCSSCCSCHHHHHHHHHHHHTT
T ss_pred HHHh----ChHhhhhhccc--CCCCCCChHHHHHHHHHHHHhc
Confidence 9986 88888888864 3567777788888888877765
No 30
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.85 E-value=2.2e-20 Score=201.24 Aligned_cols=198 Identities=14% Similarity=0.026 Sum_probs=142.6
Q ss_pred HHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHH
Q 006091 376 LKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIA 455 (662)
Q Consensus 376 ~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~ 455 (662)
.+..+..+|.++++|+..++.+.. ++.+ ++.+|+|+. |.+....
T Consensus 147 ~~~~~~~~d~ii~~S~~~~~~l~~----------~g~~--ki~vi~n~~----f~~~~~~-------------------- 190 (374)
T 2xci_A 147 EKILSKKFDLIIMRTQEDVEKFKT----------FGAK--RVFSCGNLK----FICQKGK-------------------- 190 (374)
T ss_dssp HHHHHTTCSEEEESCHHHHHHHHT----------TTCC--SEEECCCGG----GCCCCCS--------------------
T ss_pred HHHHHHhCCEEEECCHHHHHHHHH----------cCCC--eEEEcCCCc----cCCCcCh--------------------
Confidence 455678899999999998887752 2333 899999984 1111100
Q ss_pred HHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhcCCcE--------
Q 006091 456 LQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKY-------- 525 (662)
Q Consensus 456 ~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~~~~~-------- 525 (662)
++ . -..+++++.|+ ..||++.+++|++.+.+ ++++|+|+|+|+...+.+.+.+.+ ....+
T Consensus 191 -~~--~----l~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~~~lvivG~g~~~~~~l~~~~~~-~gl~~~~~~~~~~ 260 (374)
T 2xci_A 191 -GI--K----LKGEFIVAGSI--HTGEVEIILKAFKEIKKTYSSLKLILVPRHIENAKIFEKKARD-FGFKTSFFENLEG 260 (374)
T ss_dssp -CC--C----CSSCEEEEEEE--CGGGHHHHHHHHHHHHTTCTTCEEEEEESSGGGHHHHHHHHHH-TTCCEEETTCCCS
T ss_pred -hh--h----hcCCEEEEEeC--CCchHHHHHHHHHHHHhhCCCcEEEEECCCHHHHHHHHHHHHH-CCCceEEecCCCC
Confidence 00 0 12367777775 46899999999999965 589999999986332344444433 22221
Q ss_pred -EEEcCCChHHHHHHHHhcCEEEEcCCC-CCCcHHHHHHHHcCCcEEEe-CCcccccccccccccccCCCCccceEEECC
Q 006091 526 -RGWVGFNVPISHRITAGCDILLMPSRF-EPCGLNQLYAMRYGTIPVVH-ATGGLRDTVENFNPFAREGSGEGTGWSFLP 602 (662)
Q Consensus 526 -~~~~~~~~~~~~~ll~~aDi~v~PS~~-E~fgl~~lEAma~G~PvVas-~~gg~~eii~~~~~~~~~~~~~~~G~l~~~ 602 (662)
+.+.++. +++..+|+.||++++||.+ |++|++++||||||+|||++ +.++.+|++.+ ...+|+++++
T Consensus 261 ~v~~~~~~-~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~---------~~~~G~l~~~ 330 (374)
T 2xci_A 261 DVILVDRF-GILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEF---------LEKEGAGFEV 330 (374)
T ss_dssp SEEECCSS-SCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHH---------HHHTTCEEEC
T ss_pred cEEEECCH-HHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHH---------HHHCCCEEEe
Confidence 2334433 3466899999999988765 67899999999999999985 78999998875 0247888888
Q ss_pred CCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH
Q 006091 603 LSEESMLTALRFAIRTYREHKSSWEGLMRRGM 634 (662)
Q Consensus 603 ~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~~ 634 (662)
.|+++|+++|.++++ | +++++|++++.
T Consensus 331 ~d~~~La~ai~~ll~----d-~~r~~mg~~ar 357 (374)
T 2xci_A 331 KNETELVTKLTELLS----V-KKEIKVEEKSR 357 (374)
T ss_dssp CSHHHHHHHHHHHHH----S-CCCCCHHHHHH
T ss_pred CCHHHHHHHHHHHHh----H-HHHHHHHHHHH
Confidence 999999999999997 6 77778887763
No 31
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.85 E-value=1.4e-20 Score=180.71 Aligned_cols=137 Identities=21% Similarity=0.241 Sum_probs=116.2
Q ss_pred CCCCEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCCh--hhHHHHHHHHhhc--CCcEEEEcCCChHHHHHHHH
Q 006091 466 PDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDP--QFESWMRDTEATY--KDKYRGWVGFNVPISHRITA 541 (662)
Q Consensus 466 ~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~--~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~ll~ 541 (662)
.++++|+|+|++.+.||++.+++|++.+ ++++|+|+|.++. ............. ++.+.+++ +.+++..+|+
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l--~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~--~~~e~~~~~~ 96 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL--QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSV--SEEELIDLYS 96 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC--TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESC--CHHHHHHHHH
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC--CCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCC--CHHHHHHHHH
Confidence 5778999999999999999999999998 6899999999863 2333333112222 34455554 5666789999
Q ss_pred hcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 542 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 542 ~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
.||++++||..|++|++++|||+||+|||+++.+++.|++.+ +.+|+++ +.|+++++++|.++++
T Consensus 97 ~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~----------~~~g~~~-~~d~~~l~~~i~~l~~ 161 (177)
T 2f9f_A 97 RCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVIN----------EKTGYLV-NADVNEIIDAMKKVSK 161 (177)
T ss_dssp HCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCB----------TTTEEEE-CSCHHHHHHHHHHHHH
T ss_pred hCCEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcC----------CCccEEe-CCCHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999998 7899999 8999999999999997
No 32
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.77 E-value=2e-17 Score=179.30 Aligned_cols=159 Identities=12% Similarity=0.073 Sum_probs=118.8
Q ss_pred CCEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEE
Q 006091 468 CPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILL 547 (662)
Q Consensus 468 ~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v 547 (662)
..++++.|++. .|+.+.+.++++.+.+.++++++++++....+. ++ ....++. +.++.+ ...+|+.||++|
T Consensus 243 ~~vlv~~G~~~-~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~-l~----~~~~~v~-~~~~~~--~~~~l~~ad~~v 313 (412)
T 3otg_A 243 PLVYLTLGTSS-GGTVEVLRAAIDGLAGLDADVLVASGPSLDVSG-LG----EVPANVR-LESWVP--QAALLPHVDLVV 313 (412)
T ss_dssp CEEEEECTTTT-CSCHHHHHHHHHHHHTSSSEEEEECCSSCCCTT-CC----CCCTTEE-EESCCC--HHHHGGGCSEEE
T ss_pred CEEEEEcCCCC-cCcHHHHHHHHHHHHcCCCEEEEEECCCCChhh-hc----cCCCcEE-EeCCCC--HHHHHhcCcEEE
Confidence 34667778886 788888888888877668888887765421111 10 1122332 344442 558999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCcEEEeCCc----ccccccccccccccCCCCccceEEECCC--CHHHHHHHHHHHHHHhhh
Q 006091 548 MPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIRTYRE 621 (662)
Q Consensus 548 ~PS~~E~fgl~~lEAma~G~PvVas~~g----g~~eii~~~~~~~~~~~~~~~G~l~~~~--d~~~la~aI~~~l~~~~~ 621 (662)
.++ .+.+++|||++|+|+|+...+ +..+.+.+ .++|+++++. |+++++++|.+++.
T Consensus 314 ~~~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~----------~g~g~~~~~~~~~~~~l~~ai~~ll~---- 375 (412)
T 3otg_A 314 HHG----GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQ----------AGAGDHLLPDNISPDSVSGAAKRLLA---- 375 (412)
T ss_dssp ESC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH----------HTSEEECCGGGCCHHHHHHHHHHHHH----
T ss_pred ECC----chHHHHHHHHhCCCEEecCCchhHHHHHHHHHH----------cCCEEecCcccCCHHHHHHHHHHHHh----
Confidence 876 237899999999999996554 46777877 7899999876 89999999999987
Q ss_pred CHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHH
Q 006091 622 HKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEW 653 (662)
Q Consensus 622 ~~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy~~ 653 (662)
|++.++++++.+ +.+.++++++++.+++++.+
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 376 EESYRAGARAVAAEIAAMPGPDEVVRLLPGFASR 409 (412)
T ss_dssp CHHHHHHHHHHHHHHHHSCCHHHHHTTHHHHHC-
T ss_pred CHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcc
Confidence 888888888766 46788999999999988754
No 33
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=99.74 E-value=3.8e-17 Score=173.09 Aligned_cols=243 Identities=12% Similarity=-0.011 Sum_probs=160.5
Q ss_pred CccEEEeCCCC--cchH-HHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccc
Q 006091 290 EKCIFLVNDWH--AGLV-PVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHA 366 (662)
Q Consensus 290 ~pDVVh~h~~~--~~l~-~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 366 (662)
++|+|+++... .... ..++...++ .++|+|+.+||+. +.... ..
T Consensus 74 ~~DvIi~q~P~~~~~~~~~~~~~~lk~-----~~~k~i~~ihDl~-----pl~~~------~~----------------- 120 (339)
T 3rhz_A 74 HGDVVIFQTPTWNTTEFDEKLMNKLKL-----YDIKIVLFIHDVV-----PLMFS------GN----------------- 120 (339)
T ss_dssp TTCEEEEEECCSSCHHHHHHHHHHHTT-----SSCEEEEEESCCH-----HHHCG------GG-----------------
T ss_pred CCCEEEEeCCCcchhhHHHHHHHHHHh-----cCCEEEEEecccH-----HhhCc------cc-----------------
Confidence 68999987543 2222 334443321 4899999999873 11100 00
Q ss_pred cCcchhhhHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCccccc
Q 006091 367 LDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDL 446 (662)
Q Consensus 367 ~~~~~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~ 446 (662)
......++..++.||.|+++|+.+++.+.. .+.+..++.++++. |... +.. .
T Consensus 121 ---~~~~~~E~~~y~~aD~Ii~~S~~~~~~l~~----------~G~~~~ki~~~~~~-~~~~--~~~-~----------- 172 (339)
T 3rhz_A 121 ---FYLMDRTIAYYNKADVVVAPSQKMIDKLRD----------FGMNVSKTVVQGMW-DHPT--QAP-M----------- 172 (339)
T ss_dssp ---GGGHHHHHHHHTTCSEEEESCHHHHHHHHH----------TTCCCSEEEECCSC-CCCC--CCC-C-----------
T ss_pred ---hhhHHHHHHHHHHCCEEEECCHHHHHHHHH----------cCCCcCceeecCCC-CccC--ccc-c-----------
Confidence 011236788899999999999999988753 23444566544432 2211 000 0
Q ss_pred chhHHhHHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEE
Q 006091 447 SGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYR 526 (662)
Q Consensus 447 ~~~~~~k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~ 526 (662)
..+ .++++|+|+|++.....+ ..+ .++++|+|+|+|+.. ...++.+.
T Consensus 173 --------------~~~--~~~~~i~yaG~l~k~~~L-------~~l-~~~~~f~ivG~G~~~---------~l~nV~f~ 219 (339)
T 3rhz_A 173 --------------FPA--GLKREIHFPGNPERFSFV-------KEW-KYDIPLKVYTWQNVE---------LPQNVHKI 219 (339)
T ss_dssp --------------CCC--EEEEEEEECSCTTTCGGG-------GGC-CCSSCEEEEESCCCC---------CCTTEEEE
T ss_pred --------------ccc--CCCcEEEEeCCcchhhHH-------HhC-CCCCeEEEEeCCccc---------CcCCEEEe
Confidence 001 245789999999853322 222 368999999999732 12255666
Q ss_pred EEcCCChHHHHHHHHhcCEEEEcCCC-------CCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEE
Q 006091 527 GWVGFNVPISHRITAGCDILLMPSRF-------EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWS 599 (662)
Q Consensus 527 ~~~~~~~~~~~~ll~~aDi~v~PS~~-------E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l 599 (662)
|++ +.+++..+++.+|+.++.... .++|.+++||||||+|||+++.+++++++.+ +++|++
T Consensus 220 G~~--~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v~~----------~~~G~~ 287 (339)
T 3rhz_A 220 NYR--PDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQELIEN----------NGLGWI 287 (339)
T ss_dssp ECC--CHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTHHHHH----------HTCEEE
T ss_pred CCC--CHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHHHHHh----------CCeEEE
Confidence 666 667788899988998886211 2579999999999999999999999999999 889999
Q ss_pred ECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH--HhcCCHHHHHHH
Q 006091 600 FLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM--EKDYTWENAAIQ 646 (662)
Q Consensus 600 ~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~~--~~~fs~e~~a~~ 646 (662)
++ +.++++++|..+ .++.+++|++++. .+.+++...+++
T Consensus 288 ~~--~~~e~~~~i~~l------~~~~~~~m~~na~~~a~~~~~~~f~k~ 328 (339)
T 3rhz_A 288 VK--DVEEAIMKVKNV------NEDEYIELVKNVRSFNPILRKGFFTRR 328 (339)
T ss_dssp ES--SHHHHHHHHHHC------CHHHHHHHHHHHHHHTHHHHTTHHHHH
T ss_pred eC--CHHHHHHHHHHh------CHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 97 578888777754 3566788888873 334444444433
No 34
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.72 E-value=2e-16 Score=171.64 Aligned_cols=221 Identities=13% Similarity=0.065 Sum_probs=146.1
Q ss_pred HhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCC-CCCCCCCCCCchhhcccCcccccchhHHhHHHHHHH
Q 006091 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG-IDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 459 (662)
Q Consensus 381 ~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnG-vd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~ 459 (662)
+.+|.++++++..++.+.. .+.+++++.++.|. +|...+.+.. .......+.+++++
T Consensus 165 ~~a~~~~~~se~~~~~l~~----------~G~~~~ki~vvGn~~~d~~~~~~~~------------~~~~~~~~~~~r~~ 222 (396)
T 3dzc_A 165 ALTQYHFAPTDTSRANLLQ----------ENYNAENIFVTGNTVIDALLAVREK------------IHTDMDLQATLESQ 222 (396)
T ss_dssp HTCSEEEESSHHHHHHHHH----------TTCCGGGEEECCCHHHHHHHHHHHH------------HHHCHHHHHHHHHT
T ss_pred HhcCEEECCCHHHHHHHHH----------cCCCcCcEEEECCcHHHHHHHhhhh------------cccchhhHHHHHHH
Confidence 5789999999988877642 24556789999985 4421110000 00000113677888
Q ss_pred hC-CCCCCCCCEEE-EEecCC-CccCHHHHHHHHHhccC--CCeEEEEE-eCCChhhHHHHHHHHh-hcCCcEEEEcCCC
Q 006091 460 LG-LPIRPDCPLIG-FIGRLD-YQKGIDLIRLAAPEILA--DDIQFVML-GSGDPQFESWMRDTEA-TYKDKYRGWVGFN 532 (662)
Q Consensus 460 lg-l~~~~~~~~Il-~vGrl~-~~Kg~d~Ll~A~~~l~~--~d~~lviv-G~g~~~~~~~~~~l~~-~~~~~~~~~~~~~ 532 (662)
+| ++ +++++++ +.+|.. ..|+++.+++|++.+.+ +++++++. |.+ +...+.++.... ..++.+.+.+++
T Consensus 223 lg~l~--~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~~-~~~~~~l~~~~~~~~~v~~~~~lg~- 298 (396)
T 3dzc_A 223 FPMLD--ASKKLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHLN-PNVREPVNKLLKGVSNIVLIEPQQY- 298 (396)
T ss_dssp CTTCC--TTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCBC-HHHHHHHHHHTTTCTTEEEECCCCH-
T ss_pred hCccC--CCCCEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCCC-hHHHHHHHHHHcCCCCEEEeCCCCH-
Confidence 88 44 3455544 454644 35789999999999865 58999886 555 333333333211 112233333433
Q ss_pred hHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEe-CCcccccccccccccccCCCCccceEEECCCCHHHHHHH
Q 006091 533 VPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-ATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTA 611 (662)
Q Consensus 533 ~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas-~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~a 611 (662)
.....+|+.||++|.+| + |+ .+|||++|+|+|++ +.++..|++.. +++++++. |+++++++
T Consensus 299 -~~~~~l~~~ad~vv~~S---G-g~-~~EA~a~G~PvV~~~~~~~~~e~v~~-----------G~~~lv~~-d~~~l~~a 360 (396)
T 3dzc_A 299 -LPFVYLMDRAHIILTDS---G-GI-QEEAPSLGKPVLVMRETTERPEAVAA-----------GTVKLVGT-NQQQICDA 360 (396)
T ss_dssp -HHHHHHHHHCSEEEESC---S-GG-GTTGGGGTCCEEECCSSCSCHHHHHH-----------TSEEECTT-CHHHHHHH
T ss_pred -HHHHHHHHhcCEEEECC---c-cH-HHHHHHcCCCEEEccCCCcchHHHHc-----------CceEEcCC-CHHHHHHH
Confidence 33558999999999999 3 44 38999999999998 78888888876 46788764 89999999
Q ss_pred HHHHHHHhhhCHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 006091 612 LRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVF 651 (662)
Q Consensus 612 I~~~l~~~~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy 651 (662)
|..++. |++.+++|++++ ..|.....++++.+++
T Consensus 361 i~~ll~----d~~~~~~m~~~~--~~~~~~~aa~ri~~~l 394 (396)
T 3dzc_A 361 LSLLLT----DPQAYQAMSQAH--NPYGDGKACQRIADIL 394 (396)
T ss_dssp HHHHHH----CHHHHHHHHTSC--CTTCCSCHHHHHHHHH
T ss_pred HHHHHc----CHHHHHHHhhcc--CCCcCChHHHHHHHHH
Confidence 999887 888888888753 3465556666665554
No 35
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.72 E-value=1e-16 Score=174.32 Aligned_cols=220 Identities=15% Similarity=0.035 Sum_probs=144.8
Q ss_pred HhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCC-CCCCCCCCCCchhhcccCcccccchhHHhHHHHHHH
Q 006091 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG-IDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 459 (662)
Q Consensus 381 ~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnG-vd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~ 459 (662)
..+|.+++.++..++.+.. .+.+++++.++.|. +|...+.+.... +.+.+++
T Consensus 168 ~~a~~~~~~se~~~~~l~~----------~Gi~~~~i~vvGn~~~D~~~~~~~~~~-----------------~~~~~~~ 220 (403)
T 3ot5_A 168 VMADIHFSPTKQAKENLLA----------EGKDPATIFVTGNTAIDALKTTVQKDY-----------------HHPILEN 220 (403)
T ss_dssp HHCSEEEESSHHHHHHHHH----------TTCCGGGEEECCCHHHHHHHHHSCTTC-----------------CCHHHHS
T ss_pred HhcCEEECCCHHHHHHHHH----------cCCCcccEEEeCCchHHHHHhhhhhhc-----------------chHHHHh
Confidence 4589999999988877653 24556789999884 554322111100 1123444
Q ss_pred hCCCCCCCCCEEEEEecCCC-ccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhh-cCCcEEEEcCCChHH
Q 006091 460 LGLPIRPDCPLIGFIGRLDY-QKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT-YKDKYRGWVGFNVPI 535 (662)
Q Consensus 460 lgl~~~~~~~~Il~vGrl~~-~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~ 535 (662)
+ + +++.++++.||... .|+++.+++|+..+.+ +++++++.+..++...+.++..... .++.+.+++ ....
T Consensus 221 l--~--~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~v~l~~~l--~~~~ 294 (403)
T 3ot5_A 221 L--G--DNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGGHERIHLIEPL--DAID 294 (403)
T ss_dssp C--T--TCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCC--CHHH
T ss_pred c--c--CCCEEEEEeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhCCCCCEEEeCCC--CHHH
Confidence 4 2 33445566677543 4789999999998865 5899998743323333333332111 122333333 3345
Q ss_pred HHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEe-CCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHH
Q 006091 536 SHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-ATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRF 614 (662)
Q Consensus 536 ~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas-~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~ 614 (662)
+..+|+.||+++.+| |...+|||++|+|+|++ +.++..|.+.. ++|+++.. |+++++++|..
T Consensus 295 ~~~l~~~ad~vv~~S-----Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~-----------g~~~lv~~-d~~~l~~ai~~ 357 (403)
T 3ot5_A 295 FHNFLRKSYLVFTDS-----GGVQEEAPGMGVPVLVLRDTTERPEGIEA-----------GTLKLIGT-NKENLIKEALD 357 (403)
T ss_dssp HHHHHHHEEEEEECC-----HHHHHHGGGTTCCEEECCSSCSCHHHHHH-----------TSEEECCS-CHHHHHHHHHH
T ss_pred HHHHHHhcCEEEECC-----ccHHHHHHHhCCCEEEecCCCcchhheeC-----------CcEEEcCC-CHHHHHHHHHH
Confidence 678999999999888 45559999999999998 78888888765 58999875 89999999999
Q ss_pred HHHHhhhCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 006091 615 AIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASI 656 (662)
Q Consensus 615 ~l~~~~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy~~~~~ 656 (662)
++. +++.+++|++++ ..|.....+++..+++...+.
T Consensus 358 ll~----~~~~~~~m~~~~--~~~g~~~aa~rI~~~l~~~l~ 393 (403)
T 3ot5_A 358 LLD----NKESHDKMAQAA--NPYGDGFAANRILAAIKSHFE 393 (403)
T ss_dssp HHH----CHHHHHHHHHSC--CTTCCSCHHHHHHHHHHHHHT
T ss_pred HHc----CHHHHHHHHhhc--CcccCCcHHHHHHHHHHHHhC
Confidence 887 888888887653 335444555555555555443
No 36
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.66 E-value=1.2e-14 Score=155.87 Aligned_cols=162 Identities=10% Similarity=0.007 Sum_probs=107.0
Q ss_pred CCCCEE-EEEecCCCccCHHHHHHHHHhccCC-CeEEEEE-eCCChhhHHHHHHHHhh-cCCcEEEEcCCChHHHHHHHH
Q 006091 466 PDCPLI-GFIGRLDYQKGIDLIRLAAPEILAD-DIQFVML-GSGDPQFESWMRDTEAT-YKDKYRGWVGFNVPISHRITA 541 (662)
Q Consensus 466 ~~~~~I-l~vGrl~~~Kg~d~Ll~A~~~l~~~-d~~lviv-G~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~ll~ 541 (662)
++++.+ ++.|++...+..+.+.++++.+... +++++++ |.+ ..+...+..... .+.++. +|.++ +.++|+
T Consensus 178 ~~~~~ilv~gGs~g~~~~~~~~~~al~~l~~~~~~~vi~~~G~~--~~~~~~~~~~~~~~~~~v~---~f~~d-m~~~l~ 251 (365)
T 3s2u_A 178 GRRVNLLVLGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQ--HAEITAERYRTVAVEADVA---PFISD-MAAAYA 251 (365)
T ss_dssp TSCCEEEECCTTTTCSHHHHHHHHHHHTSCTTTCCEEEEECCTT--THHHHHHHHHHTTCCCEEE---SCCSC-HHHHHH
T ss_pred CCCcEEEEECCcCCccccchhhHHHHHhcccccceEEEEecCcc--ccccccceecccccccccc---cchhh-hhhhhc
Confidence 455544 4557888888888999999988653 5665544 444 344444444332 233333 44333 568999
Q ss_pred hcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCccc--------ccccccccccccCCCCccceEEECCC--CHHHHHHH
Q 006091 542 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGL--------RDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTA 611 (662)
Q Consensus 542 ~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~--------~eii~~~~~~~~~~~~~~~G~l~~~~--d~~~la~a 611 (662)
.||++|.-+ -++++.|+|++|+|+|....... .+.+.+ .+.|++++.. +++.|+++
T Consensus 252 ~aDlvI~ra----G~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~----------~G~a~~l~~~~~~~~~L~~~ 317 (365)
T 3s2u_A 252 WADLVICRA----GALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVR----------SGAGRLLPQKSTGAAELAAQ 317 (365)
T ss_dssp HCSEEEECC----CHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHT----------TTSEEECCTTTCCHHHHHHH
T ss_pred cceEEEecC----CcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHH----------CCCEEEeecCCCCHHHHHHH
Confidence 999999654 27899999999999998765432 233444 5788988754 58999999
Q ss_pred HHHHHHHhhhCHHHHHHHHHHHHH--hcCCHHHHHHHHHHHH
Q 006091 612 LRFAIRTYREHKSSWEGLMRRGME--KDYTWENAAIQYEQVF 651 (662)
Q Consensus 612 I~~~l~~~~~~~~~~~~l~~~~~~--~~fs~e~~a~~~~~iy 651 (662)
|.+++. |++.+++|++++.. .....+++++.++++.
T Consensus 318 i~~ll~----d~~~~~~m~~~a~~~~~~~aa~~ia~~i~~la 355 (365)
T 3s2u_A 318 LSEVLM----HPETLRSMADQARSLAKPEATRTVVDACLEVA 355 (365)
T ss_dssp HHHHHH----CTHHHHHHHHHHHHTCCTTHHHHHHHHHHHHC
T ss_pred HHHHHC----CHHHHHHHHHHHHhcCCccHHHHHHHHHHHHH
Confidence 999987 89999999998742 3334455555555443
No 37
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.66 E-value=1.3e-14 Score=158.39 Aligned_cols=160 Identities=11% Similarity=0.019 Sum_probs=110.2
Q ss_pred CCCEEEEEecCCCccCHHHHHHHHHhccC-CCeEEE-EEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcC
Q 006091 467 DCPLIGFIGRLDYQKGIDLIRLAAPEILA-DDIQFV-MLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 544 (662)
Q Consensus 467 ~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~-~d~~lv-ivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aD 544 (662)
+..++++.|++. .++.+.+.++++.+.+ ++++++ ++|++.. .+. + . ....++. +.++.+.. .+|+.||
T Consensus 232 ~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~-~~~-l---~-~~~~~v~-~~~~~~~~--~~l~~ad 301 (430)
T 2iyf_A 232 EKVVLVSLGSAF-TKQPAFYRECVRAFGNLPGWHLVLQIGRKVT-PAE-L---G-ELPDNVE-VHDWVPQL--AILRQAD 301 (430)
T ss_dssp SEEEEEECTTTC-C-CHHHHHHHHHHHTTCTTEEEEEECC---C-GGG-G---C-SCCTTEE-EESSCCHH--HHHTTCS
T ss_pred CCeEEEEcCCCC-CCcHHHHHHHHHHHhcCCCeEEEEEeCCCCC-hHH-h---c-cCCCCeE-EEecCCHH--HHhhccC
Confidence 345778899998 5666666666655554 478884 6787742 111 1 1 1222332 44443333 6899999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcc----cccccccccccccCCCCccceEEECCC--CHHHHHHHHHHHHHH
Q 006091 545 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIRT 618 (662)
Q Consensus 545 i~v~PS~~E~fgl~~lEAma~G~PvVas~~gg----~~eii~~~~~~~~~~~~~~~G~l~~~~--d~~~la~aI~~~l~~ 618 (662)
++|..+ -+.+++|||++|+|+|+...++ ..+.+.+ .++|++++.. ++++++++|.+++.
T Consensus 302 ~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~----------~g~g~~~~~~~~~~~~l~~~i~~ll~- 366 (430)
T 2iyf_A 302 LFVTHA----GAGGSQEGLATATPMIAVPQAVDQFGNADMLQG----------LGVARKLATEEATADLLRETALALVD- 366 (430)
T ss_dssp EEEECC----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH----------TTSEEECCCC-CCHHHHHHHHHHHHH-
T ss_pred EEEECC----CccHHHHHHHhCCCEEECCCccchHHHHHHHHH----------cCCEEEcCCCCCCHHHHHHHHHHHHc-
Confidence 999865 2378999999999999997654 4566666 6789999876 88999999999987
Q ss_pred hhhCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHh
Q 006091 619 YREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWA 654 (662)
Q Consensus 619 ~~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy~~~ 654 (662)
|++.++++++.+ +.+.++++++++.+++++++.
T Consensus 367 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 401 (430)
T 2iyf_A 367 ---DPEVARRLRRIQAEMAQEGGTRRAADLIEAELPAR 401 (430)
T ss_dssp ---CHHHHHHHHHHHHHHHHHCHHHHHHHHHHTTSCC-
T ss_pred ---CHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhhcc
Confidence 787777777665 445689999999988877644
No 38
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.64 E-value=8.7e-16 Score=166.00 Aligned_cols=152 Identities=15% Similarity=0.014 Sum_probs=98.5
Q ss_pred CCCEEEEEecCCCcc----------CHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHH
Q 006091 467 DCPLIGFIGRLDYQK----------GIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPIS 536 (662)
Q Consensus 467 ~~~~Il~vGrl~~~K----------g~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 536 (662)
...+++++|++...| .++.+++++..+ +++++++++++. .+ . +.. ...++. +.++.+ .
T Consensus 227 ~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~---~~~~v~~~~~~~-~~-~---l~~-~~~~v~-~~~~~~--~ 294 (398)
T 4fzr_A 227 QPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL---GFEVVVAVSDKL-AQ-T---LQP-LPEGVL-AAGQFP--L 294 (398)
T ss_dssp SCEEECC----------------CCSHHHHHHHGGGG---TCEEEECCCC--------------CCTTEE-EESCCC--H
T ss_pred CCEEEEEccCcccccccccccchHHHHHHHHHHHHhC---CCEEEEEeCCcc-hh-h---hcc-CCCcEE-EeCcCC--H
Confidence 345677789996544 467777777665 789999888742 11 1 111 122322 333332 4
Q ss_pred HHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEe----CCcccccccccccccccCCCCccceEEECCC--CHHHHHH
Q 006091 537 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH----ATGGLRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLT 610 (662)
Q Consensus 537 ~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas----~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~--d~~~la~ 610 (662)
..+|+.||++|.. +-+.+++|||++|+|+|+. +..+..+.+.+ .++|+++++. +++++++
T Consensus 295 ~~ll~~ad~~v~~----gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~----------~g~g~~~~~~~~~~~~l~~ 360 (398)
T 4fzr_A 295 SAIMPACDVVVHH----GGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHA----------AGAGVEVPWEQAGVESVLA 360 (398)
T ss_dssp HHHGGGCSEEEEC----CCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHH----------TTSEEECC-------CHHH
T ss_pred HHHHhhCCEEEec----CCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHH----------cCCEEecCcccCCHHHHHH
Confidence 5799999999964 3468999999999999994 44577788887 7899999876 7889999
Q ss_pred HHHHHHHHhhhCHHHHHHHHHHH--HHhcCCHHHHHHHHH
Q 006091 611 ALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYE 648 (662)
Q Consensus 611 aI~~~l~~~~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~ 648 (662)
+|.+++. |++.++++++.+ +....+++++++.++
T Consensus 361 ai~~ll~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 396 (398)
T 4fzr_A 361 ACARIRD----DSSYVGNARRLAAEMATLPTPADIVRLIE 396 (398)
T ss_dssp HHHHHHH----CTHHHHHHHHHHHHHTTSCCHHHHHHHHT
T ss_pred HHHHHHh----CHHHHHHHHHHHHHHHcCCCHHHHHHHHh
Confidence 9999987 788888887766 467889999888764
No 39
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.59 E-value=5.8e-13 Score=143.31 Aligned_cols=158 Identities=15% Similarity=-0.015 Sum_probs=107.1
Q ss_pred CCCEEEEEecCCCcc--CHHHHHHHHHhccCCCeEEEE-EeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhc
Q 006091 467 DCPLIGFIGRLDYQK--GIDLIRLAAPEILADDIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGC 543 (662)
Q Consensus 467 ~~~~Il~vGrl~~~K--g~d~Ll~A~~~l~~~d~~lvi-vG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~a 543 (662)
...++++.|+....+ .+..++++++. .++++++ +|++. ..+. +. ....++. +.++.+.. .+|+.|
T Consensus 231 ~~~v~v~~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~-~~~~----~~-~~~~~v~-~~~~~~~~--~ll~~a 298 (402)
T 3ia7_A 231 APVLLVSLGNQFNEHPEFFRACAQAFAD---TPWHVVMAIGGFL-DPAV----LG-PLPPNVE-AHQWIPFH--SVLAHA 298 (402)
T ss_dssp CCEEEEECCSCSSCCHHHHHHHHHHHTT---SSCEEEEECCTTS-CGGG----GC-SCCTTEE-EESCCCHH--HHHTTE
T ss_pred CCEEEEECCCCCcchHHHHHHHHHHHhc---CCcEEEEEeCCcC-Chhh----hC-CCCCcEE-EecCCCHH--HHHhhC
Confidence 345667788887665 34444444443 3577766 46542 1111 11 1122332 34443333 799999
Q ss_pred CEEEEcCCCCCCcHHHHHHHHcCCcEEEeC-----CcccccccccccccccCCCCccceEEECCC--CHHHHHHHHHHHH
Q 006091 544 DILLMPSRFEPCGLNQLYAMRYGTIPVVHA-----TGGLRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAI 616 (662)
Q Consensus 544 Di~v~PS~~E~fgl~~lEAma~G~PvVas~-----~gg~~eii~~~~~~~~~~~~~~~G~l~~~~--d~~~la~aI~~~l 616 (662)
|++|..+- ..+++|||++|+|+|+.. ..+..+.+.+ .+.|.+++.. ++++++++|.+++
T Consensus 299 d~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~----------~g~g~~~~~~~~~~~~l~~~~~~ll 364 (402)
T 3ia7_A 299 RACLTHGT----TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIE----------LGLGSVLRPDQLEPASIREAVERLA 364 (402)
T ss_dssp EEEEECCC----HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHH----------TTSEEECCGGGCSHHHHHHHHHHHH
T ss_pred CEEEECCC----HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHH----------cCCEEEccCCCCCHHHHHHHHHHHH
Confidence 99997762 267899999999999654 3466677777 7899998765 8999999999998
Q ss_pred HHhhhCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHh
Q 006091 617 RTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWA 654 (662)
Q Consensus 617 ~~~~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy~~~ 654 (662)
. |++.++++.+.+ +....+++++++.+++++...
T Consensus 365 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 400 (402)
T 3ia7_A 365 A----DSAVRERVRRMQRDILSSGGPARAADEVEAYLGRV 400 (402)
T ss_dssp H----CHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred c----CHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhc
Confidence 7 787777776655 467789999999988887653
No 40
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.55 E-value=7e-14 Score=151.10 Aligned_cols=153 Identities=15% Similarity=0.091 Sum_probs=105.6
Q ss_pred CCEEEEEecCCCc-cCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEE
Q 006091 468 CPLIGFIGRLDYQ-KGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 546 (662)
Q Consensus 468 ~~~Il~vGrl~~~-Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~ 546 (662)
..++++.|++... ++.+.+.++++.+.+.+++++++++++. ... +. ....++. +.++.+ ...+|+.||++
T Consensus 233 ~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~-~~~----l~-~~~~~v~-~~~~~~--~~~ll~~ad~~ 303 (398)
T 3oti_A 233 PEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLD-ISP----LG-TLPRNVR-AVGWTP--LHTLLRTCTAV 303 (398)
T ss_dssp CEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSC-CGG----GC-SCCTTEE-EESSCC--HHHHHTTCSEE
T ss_pred CEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcC-hhh----hc-cCCCcEE-EEccCC--HHHHHhhCCEE
Confidence 4566778999654 4555555555555444899999988752 111 11 1122332 334432 34689999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCcEEE----eCCcccc--cccccccccccCCCCccceEEECCC--CHHHHHHHHHHHHHH
Q 006091 547 LMPSRFEPCGLNQLYAMRYGTIPVV----HATGGLR--DTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIRT 618 (662)
Q Consensus 547 v~PS~~E~fgl~~lEAma~G~PvVa----s~~gg~~--eii~~~~~~~~~~~~~~~G~l~~~~--d~~~la~aI~~~l~~ 618 (662)
|.. +-+.+++|||++|+|+|+ .+..+.. +.+.+ .++|+++++. +.+.++ ++++
T Consensus 304 v~~----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~----------~g~g~~~~~~~~~~~~l~----~ll~- 364 (398)
T 3oti_A 304 VHH----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSR----------RGIGLVSTSDKVDADLLR----RLIG- 364 (398)
T ss_dssp EEC----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHH----------HTSEEECCGGGCCHHHHH----HHHH-
T ss_pred EEC----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHH----------CCCEEeeCCCCCCHHHHH----HHHc-
Confidence 964 345789999999999999 5667788 88888 7899999765 455544 5555
Q ss_pred hhhCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHH
Q 006091 619 YREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVF 651 (662)
Q Consensus 619 ~~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy 651 (662)
|++.++++.+.+ +....+++.+++.++++.
T Consensus 365 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 365 ---DESLRTAAREVREEMVALPTPAETVRRIVERI 396 (398)
T ss_dssp ---CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 888888877766 567899999999887764
No 41
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.54 E-value=7e-14 Score=150.46 Aligned_cols=158 Identities=9% Similarity=0.033 Sum_probs=107.0
Q ss_pred CCEEEEEecCCCccCH-HHHHHHHHhccC-CCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCE
Q 006091 468 CPLIGFIGRLDYQKGI-DLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 545 (662)
Q Consensus 468 ~~~Il~vGrl~~~Kg~-d~Ll~A~~~l~~-~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi 545 (662)
..++++.|++...|+. ..+++++.+..+ ++++++++++++. .+. +. ....++. +.++.+. ..+++.||+
T Consensus 219 ~~vlv~~G~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~~~~-~~~----l~-~~~~~v~-~~~~~~~--~~ll~~ad~ 289 (391)
T 3tsa_A 219 RRVCICMGRMVLNATGPAPLLRAVAAATELPGVEAVIAVPPEH-RAL----LT-DLPDNAR-IAESVPL--NLFLRTCEL 289 (391)
T ss_dssp EEEEEECCHHHHHHHCSHHHHHHHHHHHTSTTEEEEEECCGGG-GGG----CT-TCCTTEE-ECCSCCG--GGTGGGCSE
T ss_pred CEEEEEcCCCCCcccchHHHHHHHHHhccCCCeEEEEEECCcc-hhh----cc-cCCCCEE-EeccCCH--HHHHhhCCE
Confidence 3456667888764433 444554444333 3899999988742 111 11 1122332 3343321 247799999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCcEEEe----CCcccccccccccccccCCCCccceEEECC----CCHHHHHHHHHHHHH
Q 006091 546 LLMPSRFEPCGLNQLYAMRYGTIPVVH----ATGGLRDTVENFNPFAREGSGEGTGWSFLP----LSEESMLTALRFAIR 617 (662)
Q Consensus 546 ~v~PS~~E~fgl~~lEAma~G~PvVas----~~gg~~eii~~~~~~~~~~~~~~~G~l~~~----~d~~~la~aI~~~l~ 617 (662)
+|..+ -+.+++|||++|+|+|+. +..+..+.+.+ .++|+++++ .++++++++|.+++.
T Consensus 290 ~v~~~----G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~----------~g~g~~~~~~~~~~~~~~l~~ai~~ll~ 355 (391)
T 3tsa_A 290 VICAG----GSGTAFTATRLGIPQLVLPQYFDQFDYARNLAA----------AGAGICLPDEQAQSDHEQFTDSIATVLG 355 (391)
T ss_dssp EEECC----CHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHH----------TTSEEECCSHHHHTCHHHHHHHHHHHHT
T ss_pred EEeCC----CHHHHHHHHHhCCCEEecCCcccHHHHHHHHHH----------cCCEEecCcccccCCHHHHHHHHHHHHc
Confidence 99643 457899999999999994 44556677777 789999988 789999999999886
Q ss_pred HhhhCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHH
Q 006091 618 TYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFE 652 (662)
Q Consensus 618 ~~~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy~ 652 (662)
|++.++++++.+ +....+++++++.++++..
T Consensus 356 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 356 ----DTGFAAAAIKLSDEITAMPHPAALVRTLENTAA 388 (391)
T ss_dssp ----CTHHHHHHHHHHHHHHTSCCHHHHHHHHHHC--
T ss_pred ----CHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 777777777655 5678899999888776543
No 42
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.53 E-value=5e-12 Score=136.99 Aligned_cols=156 Identities=12% Similarity=0.017 Sum_probs=104.1
Q ss_pred CCEEEEEecCCCccC--HHHHHHHHHhccCCCeEEEE-EeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcC
Q 006091 468 CPLIGFIGRLDYQKG--IDLIRLAAPEILADDIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 544 (662)
Q Consensus 468 ~~~Il~vGrl~~~Kg--~d~Ll~A~~~l~~~d~~lvi-vG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aD 544 (662)
..++++.|+...... +..+++++..+ ++++++ +|.+.. .+. +. ....++. +.++.+.. .+|+.||
T Consensus 248 ~~v~v~~Gs~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~-~~~----l~-~~~~~v~-~~~~~~~~--~ll~~ad 315 (415)
T 3rsc_A 248 PVVLVSLGTTFNDRPGFFRDCARAFDGQ---PWHVVMTLGGQVD-PAA----LG-DLPPNVE-AHRWVPHV--KVLEQAT 315 (415)
T ss_dssp CEEEEECTTTSCCCHHHHHHHHHHHTTS---SCEEEEECTTTSC-GGG----GC-CCCTTEE-EESCCCHH--HHHHHEE
T ss_pred CEEEEECCCCCCChHHHHHHHHHHHhcC---CcEEEEEeCCCCC-hHH----hc-CCCCcEE-EEecCCHH--HHHhhCC
Confidence 446677788765432 44444444433 588887 565521 111 11 1122333 33443332 6999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcEEEe----CCcccccccccccccccCCCCccceEEECCC--CHHHHHHHHHHHHHH
Q 006091 545 ILLMPSRFEPCGLNQLYAMRYGTIPVVH----ATGGLRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIRT 618 (662)
Q Consensus 545 i~v~PS~~E~fgl~~lEAma~G~PvVas----~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~--d~~~la~aI~~~l~~ 618 (662)
++|..+ | ..+++|||++|+|+|+. +.....+.+.+ .+.|..++.. ++++++++|.+++.
T Consensus 316 ~~v~~~---G-~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~----------~g~g~~~~~~~~~~~~l~~~i~~ll~- 380 (415)
T 3rsc_A 316 VCVTHG---G-MGTLMEALYWGRPLVVVPQSFDVQPMARRVDQ----------LGLGAVLPGEKADGDTLLAAVGAVAA- 380 (415)
T ss_dssp EEEESC---C-HHHHHHHHHTTCCEEECCCSGGGHHHHHHHHH----------HTCEEECCGGGCCHHHHHHHHHHHHT-
T ss_pred EEEECC---c-HHHHHHHHHhCCCEEEeCCcchHHHHHHHHHH----------cCCEEEcccCCCCHHHHHHHHHHHHc-
Confidence 999775 2 26889999999999994 44456667776 6789988765 78999999999886
Q ss_pred hhhCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHH
Q 006091 619 YREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEW 653 (662)
Q Consensus 619 ~~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy~~ 653 (662)
|++.++++.+.+ +.....++++++.+++++.+
T Consensus 381 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 381 ---DPALLARVEAMRGHVRRAGGAARAADAVEAYLAR 414 (415)
T ss_dssp ---CHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhc
Confidence 787777776655 45678888888888877654
No 43
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.49 E-value=1.4e-11 Score=132.19 Aligned_cols=153 Identities=14% Similarity=0.178 Sum_probs=109.2
Q ss_pred CCEEEEEecCCCc-------cCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHH
Q 006091 468 CPLIGFIGRLDYQ-------KGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT 540 (662)
Q Consensus 468 ~~~Il~vGrl~~~-------Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll 540 (662)
..++++.|++... +.++.+++++..+ +++++++++++ ..+. ++. ...++.+ +|+ +. .++|
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~~-~~~~-l~~--~~~~v~~-~~~--~~---~~~l 277 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW---DVELIVAAPDT-VAEA-LRA--EVPQARV-GWT--PL---DVVA 277 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT---TCEEEEECCHH-HHHH-HHH--HCTTSEE-ECC--CH---HHHG
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC---CcEEEEEeCCC-CHHh-hCC--CCCceEE-cCC--CH---HHHH
Confidence 4577888998875 6788888888765 78888876542 2221 111 1234555 665 22 3689
Q ss_pred HhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcc----cccccccccccccCCCCccceEEECCC--CHHHHHHHHHH
Q 006091 541 AGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRF 614 (662)
Q Consensus 541 ~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg----~~eii~~~~~~~~~~~~~~~G~l~~~~--d~~~la~aI~~ 614 (662)
+.||++|..+ -+.+++|||++|+|+|+...++ ..+.+.+ .++|+++++. ++++++++|.+
T Consensus 278 ~~~d~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~----------~g~g~~~~~~~~~~~~l~~~i~~ 343 (384)
T 2p6p_A 278 PTCDLLVHHA----GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVAD----------YGAAIALLPGEDSTEAIADSCQE 343 (384)
T ss_dssp GGCSEEEECS----CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHH----------HTSEEECCTTCCCHHHHHHHHHH
T ss_pred hhCCEEEeCC----cHHHHHHHHHhCCCEEEccCcccchHHHHHHHH----------CCCeEecCcCCCCHHHHHHHHHH
Confidence 9999999864 3468999999999999987643 6666766 6789998764 78999999999
Q ss_pred HHHHhhhCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHH
Q 006091 615 AIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVF 651 (662)
Q Consensus 615 ~l~~~~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy 651 (662)
++. |++.++++.+.+ +...-..+++++.+.++.
T Consensus 344 ll~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 344 LQA----KDTYARRAQDLSREISGMPLPATVVTALEQLA 378 (384)
T ss_dssp HHH----CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHc----CHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 987 787777777655 445557777777666554
No 44
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.38 E-value=5.9e-13 Score=143.53 Aligned_cols=218 Identities=11% Similarity=0.015 Sum_probs=134.1
Q ss_pred HhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCC-CCCCCCCCCCchhhcccCcccccchhHHhHHHHHHH
Q 006091 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG-IDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 459 (662)
Q Consensus 381 ~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnG-vd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~ 459 (662)
..+|.+++.++..++.+.. .+.+++++.++.|. +|...+. .....+.+++++
T Consensus 145 ~~a~~~~~~te~~~~~l~~----------~G~~~~~I~vtGnp~~D~~~~~-----------------~~~~~~~~~~~~ 197 (385)
T 4hwg_A 145 HISDVNITLTEHARRYLIA----------EGLPAELTFKSGSHMPEVLDRF-----------------MPKILKSDILDK 197 (385)
T ss_dssp HHCSEEEESSHHHHHHHHH----------TTCCGGGEEECCCSHHHHHHHH-----------------HHHHHHCCHHHH
T ss_pred hhhceeecCCHHHHHHHHH----------cCCCcCcEEEECCchHHHHHHh-----------------hhhcchhHHHHH
Confidence 4689999999988877653 24556789998874 3421110 001123457888
Q ss_pred hCCCCCCCCCEEEEEecCC---CccCHHHHHHHHHhccCC-CeEEEEEeCCChhhHHHHHHH-H-hhcCCcEEEEcCCCh
Q 006091 460 LGLPIRPDCPLIGFIGRLD---YQKGIDLIRLAAPEILAD-DIQFVMLGSGDPQFESWMRDT-E-ATYKDKYRGWVGFNV 533 (662)
Q Consensus 460 lgl~~~~~~~~Il~vGrl~---~~Kg~d~Ll~A~~~l~~~-d~~lvivG~g~~~~~~~~~~l-~-~~~~~~~~~~~~~~~ 533 (662)
+|++ +++.++++.+|.. ..|+++.+++|+..+.+. ++++++... +...+.++.. . .....++...-+...
T Consensus 198 lgl~--~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~--p~~~~~l~~~~~~~~~~~~v~l~~~lg~ 273 (385)
T 4hwg_A 198 LSLT--PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTH--PRTKKRLEDLEGFKELGDKIRFLPAFSF 273 (385)
T ss_dssp TTCC--TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEEC--HHHHHHHHTSGGGGGTGGGEEECCCCCH
T ss_pred cCCC--cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECC--hHHHHHHHHHHHHhcCCCCEEEEcCCCH
Confidence 9987 4444556666643 457899999999988653 677777543 3333333322 1 111123332222233
Q ss_pred HHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCc-ccccccccccccccCCCCccceEEECCCCHHHHHHHH
Q 006091 534 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG-GLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTAL 612 (662)
Q Consensus 534 ~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~g-g~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI 612 (662)
.....+|+.||+++.+| |..+.||+++|+|+|+.+.. ...|.+.. ++++++. .|.+++++++
T Consensus 274 ~~~~~l~~~adlvvt~S-----Ggv~~EA~alG~Pvv~~~~~ter~e~v~~-----------G~~~lv~-~d~~~i~~ai 336 (385)
T 4hwg_A 274 TDYVKLQMNAFCILSDS-----GTITEEASILNLPALNIREAHERPEGMDA-----------GTLIMSG-FKAERVLQAV 336 (385)
T ss_dssp HHHHHHHHHCSEEEECC-----TTHHHHHHHTTCCEEECSSSCSCTHHHHH-----------TCCEECC-SSHHHHHHHH
T ss_pred HHHHHHHHhCcEEEECC-----ccHHHHHHHcCCCEEEcCCCccchhhhhc-----------CceEEcC-CCHHHHHHHH
Confidence 34668999999999777 55789999999999997543 35677655 4778775 4899999999
Q ss_pred HHHHHHhhhCHHHHHHHHHHH--H-HhcCCHHHHHHHHHHH
Q 006091 613 RFAIRTYREHKSSWEGLMRRG--M-EKDYTWENAAIQYEQV 650 (662)
Q Consensus 613 ~~~l~~~~~~~~~~~~l~~~~--~-~~~fs~e~~a~~~~~i 650 (662)
..++. |+..+++|+.+. + ....+-+++++.+.+.
T Consensus 337 ~~ll~----d~~~~~~m~~~~~~~~g~g~aa~rI~~~l~~~ 373 (385)
T 4hwg_A 337 KTITE----EHDNNKRTQGLVPDYNEAGLVSKKILRIVLSY 373 (385)
T ss_dssp HHHHT----TCBTTBCCSCCCHHHHTCCCHHHHHHHHHHHH
T ss_pred HHHHh----ChHHHHHhhccCCCCCCCChHHHHHHHHHHHH
Confidence 98886 554444443211 2 2233444555444443
No 45
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.18 E-value=1.2e-09 Score=119.56 Aligned_cols=154 Identities=16% Similarity=0.129 Sum_probs=107.0
Q ss_pred CEEEEEecCCC-----ccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhc
Q 006091 469 PLIGFIGRLDY-----QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGC 543 (662)
Q Consensus 469 ~~Il~vGrl~~-----~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~a 543 (662)
.++++.|++.. .|.+..++++++.+ ++++++++.++ ..+. +. ....++. +.++-+. ..+|..|
T Consensus 269 ~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~-~~~~----l~-~~~~~v~-~~~~~~~--~~ll~~a 336 (441)
T 2yjn_A 269 RVCLTLGISSRENSIGQVSIEELLGAVGDV---DAEIIATFDAQ-QLEG----VA-NIPDNVR-TVGFVPM--HALLPTC 336 (441)
T ss_dssp EEEEEC----------CCSTTTTHHHHHTS---SSEEEECCCTT-TTSS----CS-SCCSSEE-ECCSCCH--HHHGGGC
T ss_pred EEEEECCCCcccccChHHHHHHHHHHHHcC---CCEEEEEECCc-chhh----hc-cCCCCEE-EecCCCH--HHHHhhC
Confidence 46778899875 48888999998776 78888876653 1111 11 1122332 4444332 3589999
Q ss_pred CEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCc----ccccccccccccccCCCCccceEEECCC--CHHHHHHHHHHHHH
Q 006091 544 DILLMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIR 617 (662)
Q Consensus 544 Di~v~PS~~E~fgl~~lEAma~G~PvVas~~g----g~~eii~~~~~~~~~~~~~~~G~l~~~~--d~~~la~aI~~~l~ 617 (662)
|++|.. +-+.+++|||++|+|+|+.... ...+.+.+ .+.|++++.. ++++++++|.+++.
T Consensus 337 d~~V~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~----------~g~g~~~~~~~~~~~~l~~~i~~ll~ 402 (441)
T 2yjn_A 337 AATVHH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQE----------FGAGIALPVPELTPDQLRESVKRVLD 402 (441)
T ss_dssp SEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH----------HTSEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CEEEEC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHH----------cCCEEEcccccCCHHHHHHHHHHHhc
Confidence 999974 3357999999999999998764 35566766 6789998765 78999999999987
Q ss_pred HhhhCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHH
Q 006091 618 TYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFE 652 (662)
Q Consensus 618 ~~~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy~ 652 (662)
|++.++++.+.+ +......+++++.+++++.
T Consensus 403 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 403 ----DPAHRAGAARMRDDMLAEPSPAEVVGICEELAA 435 (441)
T ss_dssp ----CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 788777777655 4567888888888877654
No 46
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=99.17 E-value=3e-09 Score=120.93 Aligned_cols=348 Identities=17% Similarity=0.182 Sum_probs=213.5
Q ss_pred CccEEEeCCCCcchHHHHHHhhcC-CCCC-------CCCCcEEEEecCCCCCC--CCChhhhhhcCC-C--------hhh
Q 006091 290 EKCIFLVNDWHAGLVPVLLASKYR-PHGV-------YKDARSILVIHNLSHQG--VEPAATYKNLGL-P--------SEW 350 (662)
Q Consensus 290 ~pDVVh~h~~~~~l~~~ll~~~~~-~~~~-------~~gip~v~tiH~~~~~~--~~~~~~~~~~~l-~--------~~~ 350 (662)
++.+||.|+-|++++.+-+.+.+- .+++ ....-+++|-|++-..+ .||...+..+-. . ..+
T Consensus 359 ~~~~ihlNDtHpalai~ELmR~L~d~~gl~wd~Aw~iv~~t~~yTnHT~lpealE~wpv~l~~~lLpr~~~II~ein~~f 438 (879)
T 1ygp_A 359 DQVAIQLNDTHPTLAIVELQRVLVDLEKLDWHEAWDIVTKTFAYTNHTVMQEALEKWPRRLFGHLLPRHLEIIYDINWFF 438 (879)
T ss_dssp HHEEEEEESSTTTHHHHHHHHHHHHTTCCCHHHHHHHHHHHEEEEECCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CceEEEccCCcHHHHHHHHHHHHhhhcCCCHHHHHHHHHHheeeecCcCchHhhccCCHHHHHHHCCcHHHHHHHHHHHH
Confidence 578999999888766655443220 0000 01246899999985443 244443332210 0 001
Q ss_pred hccccccccc----cccccccCcc---hhhhHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCC-ceeEecC
Q 006091 351 YGALEWVFPT----WARTHALDTG---EAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKS-VLNGITN 422 (662)
Q Consensus 351 ~~~~~~~~~~----~~~~~~~~~~---~~~~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~-ki~vIpn 422 (662)
...+...++. ..++...... ..++|...++..+..|-.||.-+.+.+.+..+ ..++..-+. |+.-++|
T Consensus 439 ~~~~~~~~~~d~~~~~~l~ii~~~~~~~~v~MA~LAi~~S~~vNGVs~LH~ev~k~~~f----~df~~l~P~~kf~n~TN 514 (879)
T 1ygp_A 439 LEDVAKKFPKDVDLLSRISIIEENSPERQIRMAFLAIVGSHKVNGVVELHSELIKTTIF----KDFIKFYGPSKFVNVTN 514 (879)
T ss_dssp HHHHHHHSTTCTHHHHHHCSEECCSSSCEEEHHHHHHHHEEEEEESSHHHHHHHHHTTT----HHHHHHHCGGGEEECCC
T ss_pred HHHHHHHcCCCHHHHHhcceeccCCCcceeehHHHHHHhcCceeEehHHHHHHHHHHHh----HHHHHhCCCCcccCcCC
Confidence 1111111111 1111111112 36788999999999999999888877754322 233333345 8999999
Q ss_pred CCCCCCCCCCCchhhc-----------ccCc------------ccc------c-chhHHhHH----HHHHHh-CCCCC--
Q 006091 423 GIDITEWNPSSDEHIA-----------SHYS------------IDD------L-SGKVQCKI----ALQKEL-GLPIR-- 465 (662)
Q Consensus 423 Gvd~~~~~~~~~~~i~-----------~~~~------------~~~------~-~~~~~~k~----~~r~~l-gl~~~-- 465 (662)
||....|-...++.+. ..+. .+| + .-|..+|. -++++. |+..+
T Consensus 515 GVt~rrWl~~~Np~L~~Li~~~iG~~~~~W~~d~~~L~~l~~~~~D~~f~~~l~~iK~~nK~~La~~i~~~~~g~~ld~~ 594 (879)
T 1ygp_A 515 GITPRRWLKQANPSLAKLISETLNDPTEEYLLDMAKLTQLEKYVEDKEFLKKWNQVKLNNKIRLVDLIKKENDGVDIINR 594 (879)
T ss_dssp CBCHHHHTTTTCHHHHHHHHHHTTCTTCGGGTCGGGGGGGGGGGGCTHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSCS
T ss_pred CcCCchhhhhcCHHHHHHHHHhcCCChhhhhhCHHHHHHHHhhCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEecCC
Confidence 9977666432222110 0111 111 0 12333343 356667 88888
Q ss_pred ---CCCCEEEEEecCCCccCHHH-HHHHHHhcc----C--------------CCeEEEEEeCCChhhH------HHHHHH
Q 006091 466 ---PDCPLIGFIGRLDYQKGIDL-IRLAAPEIL----A--------------DDIQFVMLGSGDPQFE------SWMRDT 517 (662)
Q Consensus 466 ---~~~~~Il~vGrl~~~Kg~d~-Ll~A~~~l~----~--------------~d~~lvivG~g~~~~~------~~~~~l 517 (662)
++...++++-|+..+|+..+ ++..+..+. . .+.++++.|...|.+. .++..+
T Consensus 595 ~~~p~sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~~~~~~~~p~~~~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~v 674 (879)
T 1ygp_A 595 EYLDDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKNMLKNGASIEEVARKYPRKVSIFGGKSAPGYYMAKLIIKLINCV 674 (879)
T ss_dssp TTGGGCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHSCCEEEEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCCCCeeeeeeeehhhHhHHHHHHHHHHHHHHHHHHhCccccCCCcccccCCCCeEEEEeccCCCCcHHHHHHHHHHHHH
Confidence 88899999999999999999 666655431 1 3688888888755433 222223
Q ss_pred Hhh------cCC--cEEEEcCCChHHHHHHHHhcCEEEEcCC--CCCCcHHHHHHHHcCCcEEEeCCccccccccccccc
Q 006091 518 EAT------YKD--KYRGWVGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPF 587 (662)
Q Consensus 518 ~~~------~~~--~~~~~~~~~~~~~~~ll~~aDi~v~PS~--~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~ 587 (662)
+.. ... +++....|+-.....++.+|||....|+ .|++|.+-|.+|..|.+.|+|--|...|+.++.
T Consensus 675 a~~iN~Dp~v~~~LKVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMKfalNGaLtlgtlDGanvEi~e~v--- 751 (879)
T 1ygp_A 675 ADIVNNDESIEHLLKVVFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTVDGANVEITREI--- 751 (879)
T ss_dssp HHHHTTCGGGTTSEEEEEETTCCHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTTTCEEEEESCTHHHHHHHHH---
T ss_pred HHHhccChhhCCceEEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCchhhHHHHcCCeeeecccchhHHHHHHc---
Confidence 321 122 6777777888888899999999999997 599999999999999999999999998887541
Q ss_pred ccCCCCccceEEEC-------------------------------------C---CCHHHHHHHHHH------HH---HH
Q 006091 588 AREGSGEGTGWSFL-------------------------------------P---LSEESMLTALRF------AI---RT 618 (662)
Q Consensus 588 ~~~~~~~~~G~l~~-------------------------------------~---~d~~~la~aI~~------~l---~~ 618 (662)
+.+|+|+|- + .+-+.+.+.|.. ++ ..
T Consensus 752 -----G~eN~fiFG~~~~ev~~~~~~~~~~~y~~~~~l~~v~d~i~~g~f~~~~~~~f~~l~~~L~~~~D~y~vl~Df~s 826 (879)
T 1ygp_A 752 -----GEDNVFLFGNLSENVEELRYNHQYHPQDLPSSLDSVLSYIESGQFSPENPNEFKPLVDSIKYHGDYYLVSDDFES 826 (879)
T ss_dssp -----CGGGSEEESCCHHHHHHHHHHHHHSCCCCCHHHHHHHHHTC--CCCTTSTTTTHHHHHHHHHSTTTTCHHHHHHH
T ss_pred -----CcccEEEccCCHHHHHHHHHhCchhccCCCHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhcCCCeEEEeccHHH
Confidence 135677662 1 223444444432 22 12
Q ss_pred h----------hhCHH-HHHHHHHHHH--HhcCCHHHHHHHHHH
Q 006091 619 Y----------REHKS-SWEGLMRRGM--EKDYTWENAAIQYEQ 649 (662)
Q Consensus 619 ~----------~~~~~-~~~~l~~~~~--~~~fs~e~~a~~~~~ 649 (662)
| ..|++ .|.+++...+ .-.||-++++.+|.+
T Consensus 827 Y~~~q~~v~~~Y~d~~~~W~~~~i~NiA~~G~FSSDRtI~eYa~ 870 (879)
T 1ygp_A 827 YLATHELVDQEFHNQRSEWLKKSVLSLANVGFFSSDRCIEEYSD 870 (879)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHGGGBHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCccCchHHHHHHHH
Confidence 2 23556 7888877663 458999999999965
No 47
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.16 E-value=3.8e-08 Score=106.84 Aligned_cols=157 Identities=12% Similarity=0.004 Sum_probs=99.5
Q ss_pred CCEEEEEecCCCccCHHHHHHHHHhccCCCeEEEE-EeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEE
Q 006091 468 CPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 546 (662)
Q Consensus 468 ~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvi-vG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~ 546 (662)
..++++.|+.. .+..+.+.++++.+.+.++++++ +|.+.. .+. +. ....++. ..++-+.. .+|+.||++
T Consensus 256 ~~v~v~~Gs~~-~~~~~~~~~~~~al~~~~~~~~~~~g~~~~-~~~----~~-~~~~~v~-~~~~~~~~--~~l~~~d~~ 325 (424)
T 2iya_A 256 PVLLIALGSAF-TDHLDFYRTCLSAVDGLDWHVVLSVGRFVD-PAD----LG-EVPPNVE-VHQWVPQL--DILTKASAF 325 (424)
T ss_dssp CEEEEECCSSS-CCCHHHHHHHHHHHTTCSSEEEEECCTTSC-GGG----GC-SCCTTEE-EESSCCHH--HHHTTCSEE
T ss_pred CEEEEEcCCCC-cchHHHHHHHHHHHhcCCcEEEEEECCcCC-hHH----hc-cCCCCeE-EecCCCHH--HHHhhCCEE
Confidence 44667778887 44445544444445445788754 576531 111 11 1222332 33343322 689999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCcEEEeCCc----ccccccccccccccCCCCccceEEECCC--CHHHHHHHHHHHHHHhh
Q 006091 547 LMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIRTYR 620 (662)
Q Consensus 547 v~PS~~E~fgl~~lEAma~G~PvVas~~g----g~~eii~~~~~~~~~~~~~~~G~l~~~~--d~~~la~aI~~~l~~~~ 620 (662)
|..+ -..+++|||++|+|+|+.... ...+.+.+ .+.|+.++.. +.++++++|.+++.
T Consensus 326 v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~----------~g~g~~~~~~~~~~~~l~~~i~~ll~--- 388 (424)
T 2iya_A 326 ITHA----GMGSTMEALSNAVPMVAVPQIAEQTMNAERIVE----------LGLGRHIPRDQVTAEKLREAVLAVAS--- 388 (424)
T ss_dssp EECC----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH----------TTSEEECCGGGCCHHHHHHHHHHHHH---
T ss_pred EECC----chhHHHHHHHcCCCEEEecCccchHHHHHHHHH----------CCCEEEcCcCCCCHHHHHHHHHHHHc---
Confidence 8743 237899999999999998654 23455555 5788888754 78999999999987
Q ss_pred hCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHH
Q 006091 621 EHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFE 652 (662)
Q Consensus 621 ~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy~ 652 (662)
|++.++++.+.+ +......+++++.++++..
T Consensus 389 -~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 389 -DPGVAERLAAVRQEIREAGGARAAADILEGILA 421 (424)
T ss_dssp -CHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHh
Confidence 777666666544 3445566777766666543
No 48
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.03 E-value=2.2e-08 Score=108.27 Aligned_cols=153 Identities=14% Similarity=-0.003 Sum_probs=96.2
Q ss_pred CCCEEEEEecCC-CccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCE
Q 006091 467 DCPLIGFIGRLD-YQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 545 (662)
Q Consensus 467 ~~~~Il~vGrl~-~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi 545 (662)
.+.++++.|++. +.+.++.+++++..+ ++++++.++... ... . ....++. ..++-+. ..+|..||+
T Consensus 221 ~~~Vlv~~Gs~~~~~~~~~~~~~al~~~---~~~vv~~~g~~~-~~~----~--~~~~~v~-~~~~~~~--~~ll~~~d~ 287 (404)
T 3h4t_A 221 SPPVYVGFGSGPAPAEAARVAIEAVRAQ---GRRVVLSSGWAG-LGR----I--DEGDDCL-VVGEVNH--QVLFGRVAA 287 (404)
T ss_dssp SCCEEECCTTSCCCTTHHHHHHHHHHHT---TCCEEEECTTTT-CCC----S--SCCTTEE-EESSCCH--HHHGGGSSE
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHhC---CCEEEEEeCCcc-ccc----c--cCCCCEE-EecCCCH--HHHHhhCcE
Confidence 456777789988 677788888888876 677777754321 110 0 1122222 2333322 368899999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCcEEEeCCcc----cccccccccccccCCCCccceEEECCC--CHHHHHHHHHHHHHHh
Q 006091 546 LLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIRTY 619 (662)
Q Consensus 546 ~v~PS~~E~fgl~~lEAma~G~PvVas~~gg----~~eii~~~~~~~~~~~~~~~G~l~~~~--d~~~la~aI~~~l~~~ 619 (662)
+|..+ | ..++.||+++|+|+|+....+ ..+.+.+ .+.|..++.. +.++++++|.+++.
T Consensus 288 ~v~~g---G-~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~----------~G~g~~l~~~~~~~~~l~~ai~~ll~-- 351 (404)
T 3h4t_A 288 VVHHG---G-AGTTTAVTRAGAPQVVVPQKADQPYYAGRVAD----------LGVGVAHDGPTPTVESLSAALATALT-- 351 (404)
T ss_dssp EEECC---C-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH----------HTSEEECSSSSCCHHHHHHHHHHHTS--
T ss_pred EEECC---c-HHHHHHHHHcCCCEEEcCCcccHHHHHHHHHH----------CCCEeccCcCCCCHHHHHHHHHHHhC--
Confidence 99766 2 268899999999999975442 2334555 5788887643 68888888888763
Q ss_pred hhCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHH
Q 006091 620 REHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFE 652 (662)
Q Consensus 620 ~~~~~~~~~l~~~~--~~~~fs~e~~a~~~~~iy~ 652 (662)
++.++++.+.+ +.. -..+++++.+++++.
T Consensus 352 ---~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 352 ---PGIRARAAAVAGTIRT-DGTTVAAKLLLEAIS 382 (404)
T ss_dssp ---HHHHHHHHHHHTTCCC-CHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHh
Confidence 45555555443 222 455666665555543
No 49
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=98.91 E-value=8.1e-09 Score=110.84 Aligned_cols=151 Identities=18% Similarity=0.167 Sum_probs=91.6
Q ss_pred CEEEEEecCCCcc-CHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhc--CCcEEEEcCCChHHHHHHHHhcCE
Q 006091 469 PLIGFIGRLDYQK-GIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATY--KDKYRGWVGFNVPISHRITAGCDI 545 (662)
Q Consensus 469 ~~Il~vGrl~~~K-g~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~ll~~aDi 545 (662)
.+++..|++...+ +.+.+.+++..+.+.+.++++.+.+... .. .... +..+..|+ + ...+|..+|+
T Consensus 239 ~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~-~~-----~~~~~~~v~~~~~~--p---~~~lL~~~~~ 307 (400)
T 4amg_A 239 RIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDL-AL-----LGELPANVRVVEWI--P---LGALLETCDA 307 (400)
T ss_dssp EEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCC-CC-----CCCCCTTEEEECCC--C---HHHHHTTCSE
T ss_pred EEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCccc-cc-----cccCCCCEEEEeec--C---HHHHhhhhhh
Confidence 4555668876544 4455556666665567888887654311 00 0011 22333444 2 2368999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCcEEEeCCc----ccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhh
Q 006091 546 LLMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYRE 621 (662)
Q Consensus 546 ~v~PS~~E~fgl~~lEAma~G~PvVas~~g----g~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~ 621 (662)
+|.- +-..+++|||++|+|+|+.... ...+.+.+ .+.|+.++..+ .++++|+++++
T Consensus 308 ~v~h----~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~----------~G~g~~l~~~~--~~~~al~~lL~---- 367 (400)
T 4amg_A 308 IIHH----GGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTG----------LGIGFDAEAGS--LGAEQCRRLLD---- 367 (400)
T ss_dssp EEEC----CCHHHHHHHHHHTCCEEECCC---CHHHHHHHHH----------HTSEEECCTTT--CSHHHHHHHHH----
T ss_pred eecc----CCccHHHHHHHhCCCEEEecCcccHHHHHHHHHH----------CCCEEEcCCCC--chHHHHHHHHc----
Confidence 8853 3446899999999999995433 34555655 57788876543 45778888887
Q ss_pred CHHHHHHHHHHH--HHhcCCHHHHHHHHHHH
Q 006091 622 HKSSWEGLMRRG--MEKDYTWENAAIQYEQV 650 (662)
Q Consensus 622 ~~~~~~~l~~~~--~~~~fs~e~~a~~~~~i 650 (662)
|++.+++..+-+ +...=+...+++.++++
T Consensus 368 d~~~r~~a~~l~~~~~~~~~~~~~a~~le~l 398 (400)
T 4amg_A 368 DAGLREAALRVRQEMSEMPPPAETAAXLVAL 398 (400)
T ss_dssp CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 777665554433 34445677777666553
No 50
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.72 E-value=9.6e-07 Score=95.54 Aligned_cols=133 Identities=12% Similarity=0.001 Sum_probs=88.6
Q ss_pred CCEEEEEecCC---CccCHHHHHHHHHhccCCCeEEEEE-eCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhc
Q 006091 468 CPLIGFIGRLD---YQKGIDLIRLAAPEILADDIQFVML-GSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGC 543 (662)
Q Consensus 468 ~~~Il~vGrl~---~~Kg~d~Ll~A~~~l~~~d~~lviv-G~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~a 543 (662)
..++++.|++. ..+.++.++++++.+ +++++++ |.++... .....++. ..++-+ ...+|..|
T Consensus 238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~~~--------~~~~~~v~-~~~~~~--~~~ll~~~ 303 (416)
T 1rrv_A 238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQ---GRRVILSRGWTELVL--------PDDRDDCF-AIDEVN--FQALFRRV 303 (416)
T ss_dssp CCEEECCTTCCSHHHHHHHHHHHHHHHHT---TCCEEEECTTTTCCC--------SCCCTTEE-EESSCC--HHHHGGGS
T ss_pred CeEEEecCCCCccChHHHHHHHHHHHHHC---CCeEEEEeCCccccc--------cCCCCCEE-EeccCC--hHHHhccC
Confidence 45777789885 467778888888776 5677775 6653210 11222222 333322 23588999
Q ss_pred CEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCc----ccccccccccccccCCCCccceEEECC--CCHHHHHHHHHHHHH
Q 006091 544 DILLMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVENFNPFAREGSGEGTGWSFLP--LSEESMLTALRFAIR 617 (662)
Q Consensus 544 Di~v~PS~~E~fgl~~lEAma~G~PvVas~~g----g~~eii~~~~~~~~~~~~~~~G~l~~~--~d~~~la~aI~~~l~ 617 (662)
|++|.-+ -..+++||+++|+|+|+.... ...+.+.+ .+.|+.++. .+.++++++|.++ .
T Consensus 304 d~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~----------~g~g~~~~~~~~~~~~l~~~i~~l-~ 368 (416)
T 1rrv_A 304 AAVIHHG----SAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAA----------LGIGVAHDGPTPTFESLSAALTTV-L 368 (416)
T ss_dssp SEEEECC----CHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHH----------HTSEEECSSSCCCHHHHHHHHHHH-T
T ss_pred CEEEecC----ChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHH----------CCCccCCCCCCCCHHHHHHHHHHh-h
Confidence 9999743 246999999999999997543 24445555 578888864 4788888888877 5
Q ss_pred HhhhCHHHHHHHHHHH
Q 006091 618 TYREHKSSWEGLMRRG 633 (662)
Q Consensus 618 ~~~~~~~~~~~l~~~~ 633 (662)
|++.++++.+.+
T Consensus 369 ----~~~~~~~~~~~~ 380 (416)
T 1rrv_A 369 ----APETRARAEAVA 380 (416)
T ss_dssp ----SHHHHHHHHHHT
T ss_pred ----CHHHHHHHHHHH
Confidence 777666666543
No 51
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=98.71 E-value=1e-07 Score=106.69 Aligned_cols=183 Identities=15% Similarity=0.083 Sum_probs=110.3
Q ss_pred HhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--CCeEEE--EEeCCChhhHHHHHHHHh-hcCCcEEEEcCC-C
Q 006091 459 ELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFV--MLGSGDPQFESWMRDTEA-TYKDKYRGWVGF-N 532 (662)
Q Consensus 459 ~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lv--ivG~g~~~~~~~~~~l~~-~~~~~~~~~~~~-~ 532 (662)
.++++.+.+.++++..++ ..|..+.+++++.++.+ ++..++ ++|.+.......++.+.. ....++. +.+. +
T Consensus 432 ~~~lp~~~G~v~Fg~fn~--~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~~Rv~-F~g~~p 508 (631)
T 3q3e_A 432 DYLLRENPEVVNIGIAST--TMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLGDSAT-AHPHSP 508 (631)
T ss_dssp CCCCCSCCSEEEEEEEEC--STTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHGGGEE-EECCCC
T ss_pred cccCCcCCCeEEEEECCc--cccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCCccEE-EcCCCC
Confidence 345552112455666665 57889999999998876 455543 367543223333333322 2223433 4443 3
Q ss_pred hHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHH
Q 006091 533 VPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTAL 612 (662)
Q Consensus 533 ~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI 612 (662)
.++..+.|+.+||++.|+.+.+ |++.+|||++|+|||+.....+.+-+..= ... ..|-.+|++. .+.+++++..
T Consensus 509 ~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmGVPVVTl~G~~~asRvgaS-lL~---~~GLpE~LIA-~d~eeYv~~A 582 (631)
T 3q3e_A 509 YHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLGLVGVCKTGAEVHEHIDEG-LFK---RLGLPEWLIA-NTVDEYVERA 582 (631)
T ss_dssp HHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTTCCEEEECCSSHHHHHHHH-HHH---HTTCCGGGEE-SSHHHHHHHH
T ss_pred HHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcCCCEEeccCCcHHHHhHHH-HHH---hcCCCcceec-CCHHHHHHHH
Confidence 4444578999999999998755 99999999999999997655554433200 000 0023343222 3688888888
Q ss_pred HHHHHHhhhCHHHHHHHHHHHHHh-----cCCHHHHHHHHHHHHHHhhh
Q 006091 613 RFAIRTYREHKSSWEGLMRRGMEK-----DYTWENAAIQYEQVFEWASI 656 (662)
Q Consensus 613 ~~~l~~~~~~~~~~~~l~~~~~~~-----~fs~e~~a~~~~~iy~~~~~ 656 (662)
..+.. |++.++++.++.... -|+ ...++|.+.|++++.
T Consensus 583 v~La~----D~~~l~~LR~~Lr~~~~~spLFd--~~~~~~e~~ye~~~~ 625 (631)
T 3q3e_A 583 VRLAE----NHQERLELRRYIIENNGLNTLFT--GDPRPMGQVFLEKLN 625 (631)
T ss_dssp HHHHH----CHHHHHHHHHHHHHSCCHHHHTC--SCCTHHHHHHHHHHH
T ss_pred HHHhC----CHHHHHHHHHHHHHHhhhCCCcc--hhHHHHHHHHHHHHH
Confidence 88776 899888888776422 333 345555555555543
No 52
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=98.64 E-value=1.6e-07 Score=88.44 Aligned_cols=131 Identities=15% Similarity=0.047 Sum_probs=91.8
Q ss_pred CCCEEEEEecCC---CccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHH--H
Q 006091 467 DCPLIGFIGRLD---YQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT--A 541 (662)
Q Consensus 467 ~~~~Il~vGrl~---~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll--~ 541 (662)
...++++.|++. +.|.+..+++++..+ ++++++++++.. .+ ....++. +.++-+. ..++ +
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~~~-~~--------~~~~~v~-~~~~~~~--~~~l~~~ 85 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI---PQKVLWRFDGNK-PD--------TLGLNTR-LYKWIPQ--NDLLGHP 85 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS---SSEEEEECCSSC-CT--------TCCTTEE-EESSCCH--HHHHTST
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC---CCeEEEEECCcC-cc--------cCCCcEE-EecCCCH--HHHhcCC
Confidence 345778889985 678888888888765 578888876641 11 1122222 3333222 1456 8
Q ss_pred hcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCc----ccccccccccccccCCCCccceEEECCC--CHHHHHHHHHHH
Q 006091 542 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFA 615 (662)
Q Consensus 542 ~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~g----g~~eii~~~~~~~~~~~~~~~G~l~~~~--d~~~la~aI~~~ 615 (662)
.||++|.. +-+.+++|||++|+|+|+.... +..+.+.+ .+.|+++++. ++++++++|.++
T Consensus 86 ~ad~~I~~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~----------~g~g~~~~~~~~~~~~l~~~i~~l 151 (170)
T 2o6l_A 86 KTRAFITH----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA----------RGAAVRVDFNTMSSTDLLNALKRV 151 (170)
T ss_dssp TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT----------TTSEEECCTTTCCHHHHHHHHHHH
T ss_pred CcCEEEEc----CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH----------cCCeEEeccccCCHHHHHHHHHHH
Confidence 99999974 3468999999999999998764 34566666 6899999866 789999999999
Q ss_pred HHHhhhCHHHHHHHH
Q 006091 616 IRTYREHKSSWEGLM 630 (662)
Q Consensus 616 l~~~~~~~~~~~~l~ 630 (662)
+. |++.++++.
T Consensus 152 l~----~~~~~~~a~ 162 (170)
T 2o6l_A 152 IN----DPSYKENVM 162 (170)
T ss_dssp HH----CHHHHHHHH
T ss_pred Hc----CHHHHHHHH
Confidence 87 666444433
No 53
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.04 E-value=2e-05 Score=85.05 Aligned_cols=155 Identities=13% Similarity=0.033 Sum_probs=101.3
Q ss_pred CCEEEEEecC-CCccCHHHHHHHHHhccCCCeEEEEE-eCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCE
Q 006091 468 CPLIGFIGRL-DYQKGIDLIRLAAPEILADDIQFVML-GSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 545 (662)
Q Consensus 468 ~~~Il~vGrl-~~~Kg~d~Ll~A~~~l~~~d~~lviv-G~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi 545 (662)
..++++.|++ .+.+..+.++++++.+ +.+++++ |.++... .....++ .+.++-+. ..+|..||+
T Consensus 239 ~~v~v~~Gs~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~~~--------~~~~~~v-~~~~~~~~--~~~l~~~d~ 304 (415)
T 1iir_A 239 PPVYLGFGSLGAPADAVRVAIDAIRAH---GRRVILSRGWADLVL--------PDDGADC-FAIGEVNH--QVLFGRVAA 304 (415)
T ss_dssp CCEEEECC---CCHHHHHHHHHHHHHT---TCCEEECTTCTTCCC--------SSCGGGE-EECSSCCH--HHHGGGSSE
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHC---CCeEEEEeCCCcccc--------cCCCCCE-EEeCcCCh--HHHHhhCCE
Confidence 4677888998 5888889999999877 4566665 7653210 1111222 24444332 257899999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCcEEEeCCcc----cccccccccccccCCCCccceEEECC--CCHHHHHHHHHHHHHHh
Q 006091 546 LLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGEGTGWSFLP--LSEESMLTALRFAIRTY 619 (662)
Q Consensus 546 ~v~PS~~E~fgl~~lEAma~G~PvVas~~gg----~~eii~~~~~~~~~~~~~~~G~l~~~--~d~~~la~aI~~~l~~~ 619 (662)
+|..+ -..+++|||++|+|+|+....+ ..+.+.+ .+.|+.++. .+.++++++|.++ .
T Consensus 305 ~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~----------~g~g~~~~~~~~~~~~l~~~i~~l-~-- 367 (415)
T 1iir_A 305 VIHHG----GAGTTHVAARAGAPQILLPQMADQPYYAGRVAE----------LGVGVAHDGPIPTFDSLSAALATA-L-- 367 (415)
T ss_dssp EEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH----------HTSEEECSSSSCCHHHHHHHHHHH-T--
T ss_pred EEeCC----ChhHHHHHHHcCCCEEECCCCCccHHHHHHHHH----------CCCcccCCcCCCCHHHHHHHHHHH-c--
Confidence 99754 2369999999999999986543 4555665 678998865 3788888888877 5
Q ss_pred hhCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhC
Q 006091 620 REHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASID 657 (662)
Q Consensus 620 ~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy~~~~~~ 657 (662)
|++.++++.+.+ +.+....-+++..+.+++++..
T Consensus 368 --~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 368 --TPETHARATAVA--GTIRTDGAAVAARLLLDAVSRE 401 (415)
T ss_dssp --SHHHHHHHHHHH--HHSCSCHHHHHHHHHHHHHHTC
T ss_pred --CHHHHHHHHHHH--HHHhhcChHHHHHHHHHHHHhc
Confidence 777666655543 3344455556666666666553
No 54
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.25 E-value=0.01 Score=68.67 Aligned_cols=179 Identities=9% Similarity=-0.053 Sum_probs=108.3
Q ss_pred HHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccC--CCeEEEEEeCCChhhHHHHHHHHhhc-C-CcEEEEcCC-
Q 006091 457 QKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATY-K-DKYRGWVGF- 531 (662)
Q Consensus 457 r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~--~d~~lvivG~g~~~~~~~~~~l~~~~-~-~~~~~~~~~- 531 (662)
|..+||| .+.++++...+ ..|=-+.+++++.++++ ++-+|++..........+.+.+.... . .++. +.+.
T Consensus 514 R~~~gLp--~~~v~f~~fN~--~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~-f~~~~ 588 (723)
T 4gyw_A 514 RSQYGLP--EDAIVYCNFNQ--LYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRII-FSPVA 588 (723)
T ss_dssp GGGGTCC--TTSEEEECCSC--GGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEE-EEECC
T ss_pred hhhcCCC--CCCEEEEeCCc--cccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEE-ECCCC
Confidence 5677887 45444443333 46656677777776655 68899888776433333333333321 1 2333 3332
Q ss_pred ChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCccccc-----ccccccccccCCCCccceEEECCCCHH
Q 006091 532 NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRD-----TVENFNPFAREGSGEGTGWSFLPLSEE 606 (662)
Q Consensus 532 ~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~e-----ii~~~~~~~~~~~~~~~G~l~~~~d~~ 606 (662)
+.++-...+..+||++=|..+ +-+.+.+||+.+|+|||+-....+.. ++... |-.-++ ..|.+
T Consensus 589 ~~~~~l~~~~~~Di~LDt~p~-~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~---------gl~e~i--a~~~~ 656 (723)
T 4gyw_A 589 PKEEHVRRGQLADVCLDTPLC-NGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCL---------GCLELI--AKNRQ 656 (723)
T ss_dssp CHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHH---------TCGGGB--CSSHH
T ss_pred CHHHHHHHhCCCeEEeCCCCc-CCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHc---------CCcccc--cCCHH
Confidence 333334688999999988777 66899999999999999954222211 11110 011122 23677
Q ss_pred HHHHHHHHHHHHhhhCHHHHHHHHHHH---H--HhcCCHHHHHHHHHHHHHHhhh
Q 006091 607 SMLTALRFAIRTYREHKSSWEGLMRRG---M--EKDYTWENAAIQYEQVFEWASI 656 (662)
Q Consensus 607 ~la~aI~~~l~~~~~~~~~~~~l~~~~---~--~~~fs~e~~a~~~~~iy~~~~~ 656 (662)
++.+.-..+.. |++.+.++...- + ..-|+-...++.+++.|+++..
T Consensus 657 ~Y~~~a~~la~----d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~ 707 (723)
T 4gyw_A 657 EYEDIAVKLGT----DLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWE 707 (723)
T ss_dssp HHHHHHHHHHH----CHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhc----CHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHH
Confidence 77766666655 777666665443 1 2368999999999999987753
No 55
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=96.11 E-value=0.017 Score=58.79 Aligned_cols=93 Identities=11% Similarity=0.025 Sum_probs=58.4
Q ss_pred CEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEEE
Q 006091 469 PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLM 548 (662)
Q Consensus 469 ~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v~ 548 (662)
.++++.|-.++..-...+++++... .--.++.|.+.+.+++..+...... ++. ..++.++ +.++|+.||++|.
T Consensus 159 ~ILv~~GG~d~~~l~~~vl~~L~~~---~~i~vv~G~~~~~~~~l~~~~~~~~--~v~-v~~~~~~-m~~~m~~aDlvI~ 231 (282)
T 3hbm_A 159 DFFICMGGTDIKNLSLQIASELPKT---KIISIATSSSNPNLKKLQKFAKLHN--NIR-LFIDHEN-IAKLMNESNKLII 231 (282)
T ss_dssp EEEEECCSCCTTCHHHHHHHHSCTT---SCEEEEECTTCTTHHHHHHHHHTCS--SEE-EEESCSC-HHHHHHTEEEEEE
T ss_pred eEEEEECCCchhhHHHHHHHHhhcC---CCEEEEECCCchHHHHHHHHHhhCC--CEE-EEeCHHH-HHHHHHHCCEEEE
Confidence 3556777766554334455555432 2245667888765555444433222 332 2234333 5689999999998
Q ss_pred cCCCCCCcHHHHHHHHcCCcEEEeC
Q 006091 549 PSRFEPCGLNQLYAMRYGTIPVVHA 573 (662)
Q Consensus 549 PS~~E~fgl~~lEAma~G~PvVas~ 573 (662)
+. |.++.|++++|+|.|.-.
T Consensus 232 ~g-----G~T~~E~~~~g~P~i~ip 251 (282)
T 3hbm_A 232 SA-----SSLVNEALLLKANFKAIC 251 (282)
T ss_dssp ES-----SHHHHHHHHTTCCEEEEC
T ss_pred CC-----cHHHHHHHHcCCCEEEEe
Confidence 43 589999999999999864
No 56
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=95.61 E-value=0.21 Score=51.65 Aligned_cols=111 Identities=17% Similarity=0.156 Sum_probs=72.7
Q ss_pred HHHHHHHhCCCCCCCCC-EEEEEec-CCCccCH--HHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcC----Cc
Q 006091 453 KIALQKELGLPIRPDCP-LIGFIGR-LDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYK----DK 524 (662)
Q Consensus 453 k~~~r~~lgl~~~~~~~-~Il~vGr-l~~~Kg~--d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~----~~ 524 (662)
+.++++.++++ .+++ +++..|. ..+.|.+ +.+.+++..|.+.+++++++|... ..+..+.+..... ..
T Consensus 167 ~~~~~~~~~~~--~~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~--e~~~~~~i~~~~~~~~~~~ 242 (348)
T 1psw_A 167 KSYTCNQFSLS--SERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAK--DHEAGNEILAALNTEQQAW 242 (348)
T ss_dssp HHHHHHHTTCC--SSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGG--GHHHHHHHHTTSCHHHHTT
T ss_pred HHHHHHHhCCC--CCCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChh--hHHHHHHHHHhhhhccccc
Confidence 45567778865 3444 4455565 5566765 488888888876689999988653 2334444443321 23
Q ss_pred EEEEcCC-ChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEe
Q 006091 525 YRGWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (662)
Q Consensus 525 ~~~~~~~-~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas 572 (662)
.....+. +-.++.++++.||++|... .|..-+ |.|+|+|+|+-
T Consensus 243 ~~~l~g~~sl~e~~ali~~a~l~I~~D----sg~~Hl-Aaa~g~P~v~l 286 (348)
T 1psw_A 243 CRNLAGETQLDQAVILIAACKAIVTND----SGLMHV-AAALNRPLVAL 286 (348)
T ss_dssp EEECTTTSCHHHHHHHHHTSSEEEEES----SHHHHH-HHHTTCCEEEE
T ss_pred eEeccCcCCHHHHHHHHHhCCEEEecC----CHHHHH-HHHcCCCEEEE
Confidence 4444443 3455678999999999875 244444 99999999994
No 57
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=94.66 E-value=0.23 Score=53.94 Aligned_cols=132 Identities=15% Similarity=0.065 Sum_probs=73.3
Q ss_pred CCC-EEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhh--cCCcEEEEcCCChHHHHHHHHhc
Q 006091 467 DCP-LIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEAT--YKDKYRGWVGFNVPISHRITAGC 543 (662)
Q Consensus 467 ~~~-~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~ll~~a 543 (662)
+++ +++..|.+... ..+.+.+.+..|...+.+|+++-..+. ...+-...... .+..++.|+ ++ ..+|+.+
T Consensus 272 ~~~vVyvsfGS~~~~-~~~~~~el~~~l~~~~~~flw~~~~~~-~~~lp~~~~~~~~~~~~vv~w~--Pq---~~vL~h~ 344 (454)
T 3hbf_A 272 NSSVVYISFGSVVTP-PPHELTALAESLEECGFPFIWSFRGDP-KEKLPKGFLERTKTKGKIVAWA--PQ---VEILKHS 344 (454)
T ss_dssp TTCEEEEECCSSCCC-CHHHHHHHHHHHHHHCCCEEEECCSCH-HHHSCTTHHHHTTTTEEEESSC--CH---HHHHHST
T ss_pred CCceEEEecCCCCcC-CHHHHHHHHHHHHhCCCeEEEEeCCcc-hhcCCHhHHhhcCCceEEEeeC--CH---HHHHhhc
Confidence 344 44556776542 234444444444333677777644321 11111111111 223344444 22 2689999
Q ss_pred CEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCc----ccccccccccccccCCCCc-cceEEECC--CCHHHHHHHHHHHH
Q 006091 544 DILLMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVENFNPFAREGSGE-GTGWSFLP--LSEESMLTALRFAI 616 (662)
Q Consensus 544 Di~v~PS~~E~fgl~~lEAma~G~PvVas~~g----g~~eii~~~~~~~~~~~~~-~~G~l~~~--~d~~~la~aI~~~l 616 (662)
++.++-+. +=..+++||+++|+|+|+-... -....+.+ . +.|+.++. -+.+++.++|++++
T Consensus 345 ~v~~fvtH--~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~----------~~g~Gv~l~~~~~~~~~l~~av~~ll 412 (454)
T 3hbf_A 345 SVGVFLTH--SGWNSVLECIVGGVPMISRPFFGDQGLNTILTES----------VLEIGVGVDNGVLTKESIKKALELTM 412 (454)
T ss_dssp TEEEEEEC--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT----------TSCSEEECGGGSCCHHHHHHHHHHHH
T ss_pred CcCeEEec--CCcchHHHHHHcCCCEecCcccccHHHHHHHHHH----------hhCeeEEecCCCCCHHHHHHHHHHHH
Confidence 96554442 1235899999999999996532 12233333 3 67887764 56899999999988
Q ss_pred H
Q 006091 617 R 617 (662)
Q Consensus 617 ~ 617 (662)
.
T Consensus 413 ~ 413 (454)
T 3hbf_A 413 S 413 (454)
T ss_dssp S
T ss_pred C
Confidence 5
No 58
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=93.21 E-value=0.53 Score=51.05 Aligned_cols=127 Identities=9% Similarity=0.053 Sum_probs=71.6
Q ss_pred CEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEE-eCCCh-hh-HHHHHHHHhhcCCcEEEEcCCChHHHHHHHH--hc
Q 006091 469 PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVML-GSGDP-QF-ESWMRDTEATYKDKYRGWVGFNVPISHRITA--GC 543 (662)
Q Consensus 469 ~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lviv-G~g~~-~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~--~a 543 (662)
.+++..|..... ..+.+.+.+..+...+++++++ |.... .. +.+.+.. ..+..+..|+ ++ . .+|+ ++
T Consensus 273 vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~l~~~~~~~~--~~~~~v~~w~--pq--~-~vL~h~~~ 344 (456)
T 2c1x_A 273 VVYISFGTVTTP-PPAEVVALSEALEASRVPFIWSLRDKARVHLPEGFLEKT--RGYGMVVPWA--PQ--A-EVLAHEAV 344 (456)
T ss_dssp EEEEECCSSCCC-CHHHHHHHHHHHHHHTCCEEEECCGGGGGGSCTTHHHHH--TTTEEEESCC--CH--H-HHHTSTTE
T ss_pred eEEEecCccccC-CHHHHHHHHHHHHhcCCeEEEEECCcchhhCCHHHHhhc--CCceEEecCC--CH--H-HHhcCCcC
Confidence 345556776543 3344444444443335666664 43210 00 1111111 1233444444 22 2 5788 67
Q ss_pred CEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCc----ccccccccccccccCCCCc-cceEEECC--CCHHHHHHHHHHHH
Q 006091 544 DILLMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVENFNPFAREGSGE-GTGWSFLP--LSEESMLTALRFAI 616 (662)
Q Consensus 544 Di~v~PS~~E~fgl~~lEAma~G~PvVas~~g----g~~eii~~~~~~~~~~~~~-~~G~l~~~--~d~~~la~aI~~~l 616 (662)
|++|.=. =..+++||+++|+|+|+-... .....+.+ . +.|+.++. -+.++++++|++++
T Consensus 345 ~~fvth~----G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~----------~~g~g~~l~~~~~~~~~l~~~i~~ll 410 (456)
T 2c1x_A 345 GAFVTHC----GWNSLWESVAGGVPLICRPFFGDQRLNGRMVED----------VLEIGVRIEGGVFTKSGLMSCFDQIL 410 (456)
T ss_dssp EEEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH----------TSCCEEECGGGSCCHHHHHHHHHHHH
T ss_pred CEEEecC----CcchHHHHHHhCceEEecCChhhHHHHHHHHHH----------HhCeEEEecCCCcCHHHHHHHHHHHH
Confidence 7777432 356899999999999996432 22334444 4 67887753 36899999999998
Q ss_pred H
Q 006091 617 R 617 (662)
Q Consensus 617 ~ 617 (662)
.
T Consensus 411 ~ 411 (456)
T 2c1x_A 411 S 411 (456)
T ss_dssp H
T ss_pred C
Confidence 6
No 59
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=93.19 E-value=0.44 Score=54.95 Aligned_cols=195 Identities=10% Similarity=0.012 Sum_probs=101.9
Q ss_pred HHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCC--CCCCCCchhhcccCcccccchhHHhHHHH
Q 006091 379 AIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDIT--EWNPSSDEHIASHYSIDDLSGKVQCKIAL 456 (662)
Q Consensus 379 ~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~--~~~~~~~~~i~~~~~~~~~~~~~~~k~~~ 456 (662)
.....|.+++.|+...+.+. +.++..+.++ +..|..-. .+... .....+..+
T Consensus 475 ~~~~~D~~~~~s~~~~~~~~---------~~f~~~~~~i--~~~G~PR~D~l~~~~---------------~~~~~~~~~ 528 (729)
T 3l7i_A 475 ETSRWDYLISPNRYSTEIFR---------SAFWMDEERI--LEIGYPRNDVLVNRA---------------NDQEYLDEI 528 (729)
T ss_dssp HHTTCSEEEESSHHHHHHHH---------HHTCCCGGGE--EESCCGGGHHHHHST---------------TCHHHHHHH
T ss_pred hhccCCEEEeCCHHHHHHHH---------HHhCCCcceE--EEcCCCchHHHhccc---------------chHHHHHHH
Confidence 34567999999987776554 2333333343 44454211 01000 112235678
Q ss_pred HHHhCCCCCCCCCEEEEEecCCCcc----C-----HHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHH-hhcCCcEE
Q 006091 457 QKELGLPIRPDCPLIGFIGRLDYQK----G-----IDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTE-ATYKDKYR 526 (662)
Q Consensus 457 r~~lgl~~~~~~~~Il~vGrl~~~K----g-----~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~-~~~~~~~~ 526 (662)
+++++++ +++++|+|+-.+.... | +..-++.+.+....++.+++-. .|.... ... ......+.
T Consensus 529 ~~~~~~~--~~kk~ILyaPT~r~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~li~r~--Hp~~~~---~~~~~~~~~~~~ 601 (729)
T 3l7i_A 529 RTHLNLP--SDKKVIMYAPTWRDDEFVSKGKYLFELKIDLDNLYKELGDDYVILLRM--HYLISN---ALDLSGYENFAI 601 (729)
T ss_dssp HHHTTCC--SSCEEEEECCCCCGGGCCGGGSSCCCCTTCHHHHHHHHTTTEEEEECC--CHHHHT---TCCCTTCTTTEE
T ss_pred HHHhCCC--CCCeEEEEeeeeeCCccccccccccchhhHHHHHHHHcCCCeEEEEec--Ccchhc---cccccccCCcEE
Confidence 8999988 7889999997766531 1 1112333333323466666532 222111 000 01122233
Q ss_pred EEcCCChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCccccccccc-ccccccCCCCccceEEECCCCH
Q 006091 527 GWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVEN-FNPFAREGSGEGTGWSFLPLSE 605 (662)
Q Consensus 527 ~~~~~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~-~~~~~~~~~~~~~G~l~~~~d~ 605 (662)
....+ ..+..+|..||++|.= ++-++.|++..++|||-...- ..+...+ ...+- +-...-.|-++ .+.
T Consensus 602 ~~~~~--~di~~ll~~aD~lITD-----ySSv~fD~~~l~kPiif~~~D-~~~Y~~~~rg~y~-d~~~~~pg~~~--~~~ 670 (729)
T 3l7i_A 602 DVSNY--NDVSELFLISDCLITD-----YSSVMFDYGILKRPQFFFAYD-IDKYDKGLRGFYM-NYMEDLPGPIY--TEP 670 (729)
T ss_dssp ECTTC--SCHHHHHHTCSEEEES-----SCTHHHHHGGGCCCEEEECTT-TTTTTSSCCSBSS-CTTSSSSSCEE--SSH
T ss_pred eCCCC--cCHHHHHHHhCEEEee-----chHHHHhHHhhCCCEEEecCC-HHHHhhccCCccc-ChhHhCCCCeE--CCH
Confidence 23222 2355799999999854 355999999999999986211 1111110 00000 00001234454 368
Q ss_pred HHHHHHHHHHHH
Q 006091 606 ESMLTALRFAIR 617 (662)
Q Consensus 606 ~~la~aI~~~l~ 617 (662)
++|.++|.....
T Consensus 671 ~eL~~~i~~~~~ 682 (729)
T 3l7i_A 671 YGLAKELKNLDK 682 (729)
T ss_dssp HHHHHHHTTHHH
T ss_pred HHHHHHHhhhhc
Confidence 999999987764
No 60
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=93.04 E-value=0.56 Score=50.96 Aligned_cols=130 Identities=17% Similarity=0.165 Sum_probs=72.3
Q ss_pred CEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCC-hhh-HHHHHHHHhhcCCcEEEEcCCChHHHHHHHH--hcC
Q 006091 469 PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGD-PQF-ESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCD 544 (662)
Q Consensus 469 ~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~-~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~--~aD 544 (662)
.+++..|.+...-+.+.+.+++..|.+.+.+++++-..+ ... +...+......+..++.|+ ++ . .+|+ ++|
T Consensus 278 vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~v~~w~--pq--~-~vL~h~~~~ 352 (463)
T 2acv_A 278 VVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWA--PQ--V-EVLAHKAIG 352 (463)
T ss_dssp EEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHHHCSEEEESSC--CH--H-HHHHSTTEE
T ss_pred eEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCCcccCChhHHHhhccCCCEEEEccC--CH--H-HHhCCCccC
Confidence 445556776622233444444444433367777764322 111 2222222112233444444 22 2 4776 677
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcEEEeCCc----ccccc-cccccccccCCCCccceEEE-C-------CCCHHHHHHH
Q 006091 545 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDT-VENFNPFAREGSGEGTGWSF-L-------PLSEESMLTA 611 (662)
Q Consensus 545 i~v~PS~~E~fgl~~lEAma~G~PvVas~~g----g~~ei-i~~~~~~~~~~~~~~~G~l~-~-------~~d~~~la~a 611 (662)
+||.-. =..+++||+++|+|+|+-... ..... +.+ -+.|+.+ + ..+.+++.++
T Consensus 353 ~fvth~----G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~----------~g~g~~l~~~~~~~~~~~~~~~l~~a 418 (463)
T 2acv_A 353 GFVSHC----GWNSILESMWFGVPILTWPIYAEQQLNAFRLVKE----------WGVGLGLRVDYRKGSDVVAAEEIEKG 418 (463)
T ss_dssp EEEECC----CHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHT----------SCCEEESCSSCCTTCCCCCHHHHHHH
T ss_pred eEEecC----CchhHHHHHHcCCCeeeccchhhhHHHHHHHHHH----------cCeEEEEecccCCCCccccHHHHHHH
Confidence 777433 246899999999999996532 22333 344 5788887 2 2478999999
Q ss_pred HHHHHH
Q 006091 612 LRFAIR 617 (662)
Q Consensus 612 I~~~l~ 617 (662)
|+++++
T Consensus 419 i~~ll~ 424 (463)
T 2acv_A 419 LKDLMD 424 (463)
T ss_dssp HHHHTC
T ss_pred HHHHHh
Confidence 998884
No 61
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=92.77 E-value=1.2 Score=48.62 Aligned_cols=129 Identities=8% Similarity=-0.068 Sum_probs=71.3
Q ss_pred CEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCCh-------hhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH
Q 006091 469 PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDP-------QFESWMRDTEATYKDKYRGWVGFNVPISHRITA 541 (662)
Q Consensus 469 ~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~-------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~ 541 (662)
.+++..|.+.. ...+.+.+.+..|.+.+.+++++-..+. ..+...+.+ ..+..+..|+ ++ . .+|+
T Consensus 297 vv~vs~GS~~~-~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~--~~~~~v~~~~--pq--~-~~L~ 368 (482)
T 2pq6_A 297 VVYVNFGSTTV-MTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEI--ADRGLIASWC--PQ--D-KVLN 368 (482)
T ss_dssp EEEEECCSSSC-CCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHH--TTTEEEESCC--CH--H-HHHT
T ss_pred eEEEecCCccc-CCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhHHHhc--CCCEEEEeec--CH--H-HHhc
Confidence 34455677542 2344444444444444788877633210 112222222 2233444444 22 2 4887
Q ss_pred hcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCc----ccccccc-cccccccCCCCccceEEEC-CCCHHHHHHHHHHH
Q 006091 542 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVE-NFNPFAREGSGEGTGWSFL-PLSEESMLTALRFA 615 (662)
Q Consensus 542 ~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~g----g~~eii~-~~~~~~~~~~~~~~G~l~~-~~d~~~la~aI~~~ 615 (662)
.+++-++-+. +=..+++||+++|+|+|+-... .....+. + -+.|+.++ ..+.+++.++|+++
T Consensus 369 h~~~~~~vth--~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~----------~G~g~~l~~~~~~~~l~~~i~~l 436 (482)
T 2pq6_A 369 HPSIGGFLTH--CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNE----------WEIGMEIDTNVKREELAKLINEV 436 (482)
T ss_dssp STTEEEEEEC--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHT----------SCCEEECCSSCCHHHHHHHHHHH
T ss_pred CCCCCEEEec--CCcchHHHHHHcCCCEEecCcccchHHHHHHHHHH----------hCEEEEECCCCCHHHHHHHHHHH
Confidence 7666332221 2356899999999999997543 2222232 3 46787775 24789999999998
Q ss_pred HH
Q 006091 616 IR 617 (662)
Q Consensus 616 l~ 617 (662)
+.
T Consensus 437 l~ 438 (482)
T 2pq6_A 437 IA 438 (482)
T ss_dssp HT
T ss_pred Hc
Confidence 86
No 62
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=92.53 E-value=0.7 Score=50.46 Aligned_cols=68 Identities=7% Similarity=-0.118 Sum_probs=47.1
Q ss_pred HHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCc----cccccc-ccccccccCCCCccceEEECC-----CCHHH
Q 006091 538 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTV-ENFNPFAREGSGEGTGWSFLP-----LSEES 607 (662)
Q Consensus 538 ~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~g----g~~eii-~~~~~~~~~~~~~~~G~l~~~-----~d~~~ 607 (662)
.+|+.+++.++-+. +=..+++||+++|+|+|+-... .....+ ++ -+.|+.++. .+.++
T Consensus 351 ~vL~h~~v~~fvtH--gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~----------~G~g~~l~~~~~~~~~~~~ 418 (480)
T 2vch_A 351 QVLAHPSTGGFLTH--CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSED----------IRAALRPRAGDDGLVRREE 418 (480)
T ss_dssp HHHHSTTEEEEEEC--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHT----------TCCEECCCCCTTSCCCHHH
T ss_pred HHhCCCCcCeEEec--ccchhHHHHHHcCCCEEeccccccchHHHHHHHHH----------hCeEEEeecccCCccCHHH
Confidence 68999996443331 2245899999999999996432 223333 34 467777653 47899
Q ss_pred HHHHHHHHHH
Q 006091 608 MLTALRFAIR 617 (662)
Q Consensus 608 la~aI~~~l~ 617 (662)
++++|++++.
T Consensus 419 l~~av~~vl~ 428 (480)
T 2vch_A 419 VARVVKGLME 428 (480)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999999885
No 63
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=92.45 E-value=0.68 Score=48.23 Aligned_cols=111 Identities=16% Similarity=0.075 Sum_probs=72.1
Q ss_pred HHHHHhCCCCCCCCCEE-EEEecCCCccCH--HHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcC-
Q 006091 455 ALQKELGLPIRPDCPLI-GFIGRLDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVG- 530 (662)
Q Consensus 455 ~~r~~lgl~~~~~~~~I-l~vGrl~~~Kg~--d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~- 530 (662)
++.++.|++ +++++| +..|.-.+.|.+ +.+.+++..|.+.+++++++|+.. ..+..+.+............+
T Consensus 174 ~~l~~~g~~--~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~--e~~~~~~i~~~~~~~~~~l~g~ 249 (349)
T 3tov_A 174 EFYSSHGLT--DTDILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPM--DLEMVQPVVEQMETKPIVATGK 249 (349)
T ss_dssp HHHHHTTCC--TTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTT--THHHHHHHHHTCSSCCEECTTC
T ss_pred HHHHHcCCC--CCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcc--hHHHHHHHHHhcccccEEeeCC
Confidence 455667776 455555 455654556664 678888888866688999988643 334445554443333343443
Q ss_pred CChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCC
Q 006091 531 FNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT 574 (662)
Q Consensus 531 ~~~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~ 574 (662)
.+-.++.++++.||++|..- .|..-+ |.|+|+|+|+--.
T Consensus 250 ~sl~e~~ali~~a~~~i~~D----sG~~Hl-Aaa~g~P~v~lfg 288 (349)
T 3tov_A 250 FQLGPLAAAMNRCNLLITND----SGPMHV-GISQGVPIVALYG 288 (349)
T ss_dssp CCHHHHHHHHHTCSEEEEES----SHHHHH-HHTTTCCEEEECS
T ss_pred CCHHHHHHHHHhCCEEEECC----CCHHHH-HHhcCCCEEEEEC
Confidence 24455678999999999763 355556 8999999999543
No 64
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=90.43 E-value=0.26 Score=48.11 Aligned_cols=68 Identities=16% Similarity=0.169 Sum_probs=44.9
Q ss_pred CCChHHHHHHHH-hcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCccc--------ccccccccccccCCCCccceEEE
Q 006091 530 GFNVPISHRITA-GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGL--------RDTVENFNPFAREGSGEGTGWSF 600 (662)
Q Consensus 530 ~~~~~~~~~ll~-~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~--------~eii~~~~~~~~~~~~~~~G~l~ 600 (662)
+|.++ +..+|+ .||++|.=. =..+++|++++|+|.|.-..... ++.+.+ .+.++++
T Consensus 120 ~f~~~-m~~~l~~~AdlvIsha----GagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~----------~G~~~~~ 184 (224)
T 2jzc_A 120 DFSTK-MQSIIRDYSDLVISHA----GTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVE----------LGYVWSC 184 (224)
T ss_dssp CSSSS-HHHHHHHHCSCEEESS----CHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHH----------HSCCCEE
T ss_pred eccch-HHHHHHhcCCEEEECC----cHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHH----------CCCEEEc
Confidence 55443 557999 999998643 35689999999999999654321 223433 2345555
Q ss_pred CCCCHHHHHHHHHHH
Q 006091 601 LPLSEESMLTALRFA 615 (662)
Q Consensus 601 ~~~d~~~la~aI~~~ 615 (662)
+++.++++|.++
T Consensus 185 ---~~~~L~~~i~~l 196 (224)
T 2jzc_A 185 ---APTETGLIAGLR 196 (224)
T ss_dssp ---CSCTTTHHHHHH
T ss_pred ---CHHHHHHHHHHH
Confidence 456666677665
No 65
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=88.94 E-value=0.84 Score=46.71 Aligned_cols=97 Identities=10% Similarity=0.041 Sum_probs=62.0
Q ss_pred CCEEEEEecCCCccCH--HHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcC-CChHHHHHHHHhcC
Q 006091 468 CPLIGFIGRLDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVG-FNVPISHRITAGCD 544 (662)
Q Consensus 468 ~~~Il~vGrl~~~Kg~--d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~ll~~aD 544 (662)
+.+++..|.=.+.|.+ +.+.+.+..|.+.++++++++.++ ...+..+.+..... .. ...+ .+-.++.++++.||
T Consensus 179 ~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~-~e~~~~~~i~~~~~-~~-~l~g~~sl~el~ali~~a~ 255 (326)
T 2gt1_A 179 EYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAP-HEEERAKRLAEGFA-YV-EVLPKMSLEGVARVLAGAK 255 (326)
T ss_dssp SEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSH-HHHHHHHHHHTTCT-TE-EECCCCCHHHHHHHHHTCS
T ss_pred CEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCH-HHHHHHHHHHhhCC-cc-cccCCCCHHHHHHHHHhCC
Confidence 3445556655566664 588888888877788988874443 23334444444322 22 2233 24455678999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcEEEe
Q 006091 545 ILLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (662)
Q Consensus 545 i~v~PS~~E~fgl~~lEAma~G~PvVas 572 (662)
++|..- .|..=+ |.|.|+|+|+-
T Consensus 256 l~I~~D----SG~~Hl-Aaa~g~P~v~l 278 (326)
T 2gt1_A 256 FVVSVD----TGLSHL-TAALDRPNITV 278 (326)
T ss_dssp EEEEES----SHHHHH-HHHTTCCEEEE
T ss_pred EEEecC----CcHHHH-HHHcCCCEEEE
Confidence 999773 255556 77899999995
No 66
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=72.70 E-value=2.6 Score=44.54 Aligned_cols=37 Identities=19% Similarity=0.273 Sum_probs=30.9
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||++++. | .+|--.-+..|+++|+++||+|+++++.
T Consensus 1 M~Il~~~~---~---~~GHv~P~l~la~~L~~~Gh~V~~~~~~ 37 (415)
T 1iir_A 1 MRVLLATC---G---SRGDTEPLVALAVRVRDLGADVRMCAPP 37 (415)
T ss_dssp CEEEEECC---S---CHHHHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred CeEEEEcC---C---CchhHHHHHHHHHHHHHCCCeEEEEcCH
Confidence 89999853 3 4666777889999999999999999866
No 67
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=68.88 E-value=7 Score=34.90 Aligned_cols=40 Identities=23% Similarity=0.218 Sum_probs=32.5
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcE-EEEe
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRV-MVVS 192 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV-~Vit 192 (662)
..|||+++... +|| ..-......++|.++.+.||+| .|+-
T Consensus 11 ~~~~~~ivv~~-~Py--g~~~a~~Al~~A~aala~g~eV~~VFf 51 (140)
T 2d1p_A 11 GSMRFAIVVTG-PAY--GTQQASSAFQFAQALIADGHELSSVFF 51 (140)
T ss_dssp CCCEEEEEECS-CSS--SSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CceEEEEEEcC-CCC--CcHHHHHHHHHHHHHHHCCCccCEEEE
Confidence 46999999875 676 3456677799999999999999 8875
No 68
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=68.32 E-value=6.8 Score=34.23 Aligned_cols=40 Identities=20% Similarity=0.284 Sum_probs=31.3
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcE-EEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRV-MVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV-~Vit~~ 194 (662)
||++++... .|+ ..-.......++.++.+.||+| .|+-..
T Consensus 1 mk~~iiv~~-~p~--~~~~~~~al~~a~a~~~~g~~v~~vff~~ 41 (130)
T 2hy5_A 1 MKFALQINE-GPY--QHQASDSAYQFAKAALEKGHEIFRVFFYH 41 (130)
T ss_dssp CEEEEEECS-CTT--TSTHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred CEEEEEEeC-CCC--CcHHHHHHHHHHHHHHhcCCeeCEEEEec
Confidence 789988864 565 2446677899999999999999 887533
No 69
>1xv5_A AGT, DNA alpha-glucosyltransferase; HET: DNA CME UDP; 1.73A {Enterobacteria phage T4} PDB: 1y6f_A* 1y6g_A* 1ya6_A* 1y8z_A*
Probab=67.35 E-value=85 Score=29.65 Aligned_cols=154 Identities=16% Similarity=0.107 Sum_probs=91.5
Q ss_pred EEEEEecCCCccCHHHHHHHHHhccCC-CeEEEEEeCCChhhHHHHHHHHhhcC----------------CcEEEEc-CC
Q 006091 470 LIGFIGRLDYQKGIDLIRLAAPEILAD-DIQFVMLGSGDPQFESWMRDTEATYK----------------DKYRGWV-GF 531 (662)
Q Consensus 470 ~Il~vGrl~~~Kg~d~Ll~A~~~l~~~-d~~lvivG~g~~~~~~~~~~l~~~~~----------------~~~~~~~-~~ 531 (662)
+=-|+||-...||.-.+.+--+++.++ .-.-++-|-.. ...++.--....+ .+-...+ -+
T Consensus 199 inrwigrtttwkgfyqmfdfhekflkpagkstvmegler--spafiaikekgipyeyygnreidkmnlapnqpaqildcy 276 (401)
T 1xv5_A 199 INRWIGRTTTWKGFYQMFDFHEKFLKPAGKSTVMEGLER--SPAFIAIKEKGIPYEYYGNREIDKMNLAPNQPAQILDCY 276 (401)
T ss_dssp EEEEECCSCGGGCHHHHHHHHHHTTTTTTCEEEEECCCC--SHHHHHHHHTTCCEEEECGGGGGGCCCSSSCCEEEESCC
T ss_pred hhhhhcccchhHhHHHHhhHHHHhcCccchhhhhhhhhc--CCceEEEcccCCchhhcCcchhhhhcCCCCCcchhhhhe
Confidence 346899999999999999988888876 44455555431 1111211111111 1111111 12
Q ss_pred ChHHHHHHHHhcCEEEEcCCC------CCCcHHHHHHHHcCCcEEEeC-CcccccccccccccccCCCCccce-EEECCC
Q 006091 532 NVPISHRITAGCDILLMPSRF------EPCGLNQLYAMRYGTIPVVHA-TGGLRDTVENFNPFAREGSGEGTG-WSFLPL 603 (662)
Q Consensus 532 ~~~~~~~ll~~aDi~v~PS~~------E~fgl~~lEAma~G~PvVas~-~gg~~eii~~~~~~~~~~~~~~~G-~l~~~~ 603 (662)
-..++-+-|..+.+....|.. -..-.+-+|--|||+.+|--. +|..-..-.+-.|-|. ...| +.|+.+
T Consensus 277 insemlermsksgfgyqlsklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntplts----hdsgiiwfden 352 (401)
T 1xv5_A 277 INSEMLERMSKSGFGYQLSKLNQKYLQRSLEYTHLELGACGTIPVFWKSTGENLKFRVDNTPLTS----HDSGIIWFDEN 352 (401)
T ss_dssp CHHHHHHHHHTEEEEEECCCCCGGGCSSCCCHHHHHHHHHTSEEEEEHHHHHHSBCTTTCCBGGG----SCCSCEEECTT
T ss_pred ecHHHHHHhhhcCcccchHHHHHHHHHhhhhhheeecccccceeeeecccCcceEEEecCCcccc----cCCceEEecCC
Confidence 233344677888888877752 356778899999999888753 2322111111111111 1233 567899
Q ss_pred CHHHHHHHHHHHHHHhhhCHHHHHHHHHHH
Q 006091 604 SEESMLTALRFAIRTYREHKSSWEGLMRRG 633 (662)
Q Consensus 604 d~~~la~aI~~~l~~~~~~~~~~~~l~~~~ 633 (662)
|.++.-+.|+++-. |++++.+-.+.+
T Consensus 353 dmestferikelss----dralydrereka 378 (401)
T 1xv5_A 353 DMESTFERIKELSS----DRALYDREREKA 378 (401)
T ss_dssp CHHHHHHHHHHHHT----CHHHHHHHHHHH
T ss_pred chHHHHHHHHHhcc----chhhhhHHHHHH
Confidence 99999999988765 888777666655
No 70
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=65.76 E-value=5.5 Score=39.00 Aligned_cols=41 Identities=27% Similarity=0.413 Sum_probs=30.3
Q ss_pred cCCceeEEEEeecccCccccCcHH--HHHhhHHHHHHhCCCcEEEEeec
Q 006091 148 TRVSYNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 148 ~~~~MkIl~vs~~~~P~~~~GG~~--~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.+.+|||+.|++. .||+| +.+.+||.+|+++|++|.+|-..
T Consensus 2 ~~~~~~vI~v~s~------kGGvGKTt~a~~LA~~la~~g~~VlliD~D 44 (257)
T 1wcv_1 2 LRAKVRRIALANQ------KGGVGKTTTAINLAAYLARLGKRVLLVDLD 44 (257)
T ss_dssp ---CCCEEEECCS------SCCHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCCEEEEEEeC------CCCchHHHHHHHHHHHHHHCCCCEEEEECC
Confidence 3456887777652 47776 57889999999999999999654
No 71
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=65.38 E-value=4.8 Score=38.76 Aligned_cols=36 Identities=19% Similarity=0.349 Sum_probs=28.8
Q ss_pred eeEEEEeecccCccccCcHHH--HHhhHHHHHHhCCCcEEEEeecC
Q 006091 152 YNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSPRY 195 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~--~~~~La~~L~~~GheV~Vit~~~ 195 (662)
|||++ +. .||+|+ .+.+||..|+++|++|.+|-...
T Consensus 1 mkI~v-s~-------kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAV-AG-------KGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEE-EC-------SSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEE-ec-------CCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 88887 53 366655 78899999999999999996653
No 72
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=64.45 E-value=17 Score=35.33 Aligned_cols=42 Identities=17% Similarity=0.047 Sum_probs=27.5
Q ss_pred cccccCCceeEEEEeecccCccccCcHHHHHhhHHHHHHhC--CCcEEEEeec
Q 006091 144 DKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR--GHRVMVVSPR 194 (662)
Q Consensus 144 ~~~~~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~--GheV~Vit~~ 194 (662)
......++|||+++.+ |.+.....+.++|.+. +++|..|..+
T Consensus 15 ~~~~~~~~~rI~~l~S---------G~g~~~~~~l~~l~~~~~~~~I~~Vvt~ 58 (229)
T 3auf_A 15 NLYFQGHMIRIGVLIS---------GSGTNLQAILDGCREGRIPGRVAVVISD 58 (229)
T ss_dssp SSSCBTTCEEEEEEES---------SCCHHHHHHHHHHHTTSSSEEEEEEEES
T ss_pred cccccCCCcEEEEEEe---------CCcHHHHHHHHHHHhCCCCCeEEEEEcC
Confidence 3334445689999963 2345677788888876 6787666544
No 73
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=64.27 E-value=4.9 Score=40.14 Aligned_cols=33 Identities=36% Similarity=0.547 Sum_probs=25.9
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||++. ||.|-.=..|++.|.++||+|++++-+
T Consensus 1 MkILVT----------GatGfIG~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVG----------GGTGFIGTALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEE----------TTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE----------CCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 887643 666666677999999999999999743
No 74
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=63.61 E-value=7.3 Score=39.14 Aligned_cols=40 Identities=25% Similarity=0.301 Sum_probs=29.1
Q ss_pred CceeEEEEeecccCccccCcH-HHHHhhHHHHHHhCCCcEEEEee
Q 006091 150 VSYNIVFVTAEAAPYSKTGGL-GDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~-~~~~~~La~~L~~~GheV~Vit~ 193 (662)
.+||||+|... |. ..+. ........++|.+.||+|.|+-.
T Consensus 21 ~~MKiLII~aH--P~--~~S~n~aL~~~~~~~l~~~G~eV~v~DL 61 (280)
T 4gi5_A 21 QSMKVLLIYAH--PE--PRSLNGALKNFAIRHLQQAGHEVQVSDL 61 (280)
T ss_dssp -CCEEEEEECC--SC--TTSHHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred hCCeEEEEEeC--CC--CccHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 57999999875 54 2333 34556678889999999999853
No 75
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=59.74 E-value=87 Score=27.16 Aligned_cols=117 Identities=9% Similarity=0.110 Sum_probs=68.4
Q ss_pred hccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH--hcCEEEEcCCC-CCCcHHHHHHHH----
Q 006091 492 EILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMR---- 564 (662)
Q Consensus 492 ~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~--~aDi~v~PS~~-E~fgl~~lEAma---- 564 (662)
.+.+++++++||-+.+ .....++.+-+......+.... +.....+.+. ..|++++=-.. +--|+.+++.+.
T Consensus 7 ~~m~k~~rILiVDD~~-~~r~~l~~~L~~~G~~~v~~a~-~g~~al~~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~ 84 (134)
T 3to5_A 7 AILNKNMKILIVDDFS-TMRRIVKNLLRDLGFNNTQEAD-DGLTALPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEE 84 (134)
T ss_dssp --CCTTCCEEEECSCH-HHHHHHHHHHHHTTCCCEEEES-SHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTT
T ss_pred HHhCCCCEEEEEeCCH-HHHHHHHHHHHHcCCcEEEEEC-CHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCC
Confidence 3445578888886653 4444444443333323232221 3333334444 46777765543 456888888886
Q ss_pred -cCCcEEE-eCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 565 -YGTIPVV-HATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 565 -~G~PvVa-s~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
..+|||. |..+...+..+-+ ..|.++++..|.++++|.++|.++++
T Consensus 85 ~~~ipvI~lTa~~~~~~~~~~~-------~~Ga~~yl~KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 85 LKHLPVLMITAEAKREQIIEAA-------QAGVNGYIVKPFTAATLKEKLDKIFE 132 (134)
T ss_dssp TTTCCEEEEESSCCHHHHHHHH-------HTTCCEEEESSCCHHHHHHHHHHHCC
T ss_pred CCCCeEEEEECCCCHHHHHHHH-------HCCCCEEEECCCCHHHHHHHHHHHHh
Confidence 4678887 4444333322211 12788999999999999999987763
No 76
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=58.28 E-value=13 Score=33.23 Aligned_cols=43 Identities=19% Similarity=0.116 Sum_probs=30.1
Q ss_pred ccCCceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 147 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 147 ~~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
+++..||++++..- |- .-=+...+..++..|.++||+|+|-+.
T Consensus 2 ~~~~~m~~LilLGC--PE--~Pvq~p~~lYl~~~Lk~~G~~v~VA~n 44 (157)
T 1kjn_A 2 KTESTGKALMVLGC--PE--SPVQIPLAIYTSHKLKKKGFRVTVTAN 44 (157)
T ss_dssp ----CCEEEEECCC--SC--STTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccccceeeeEEecC--CC--CcchhhHHHHHHHHHHhcCCeeEEecC
Confidence 35667999888764 21 233666788899999999999999863
No 77
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=58.15 E-value=12 Score=37.31 Aligned_cols=63 Identities=19% Similarity=0.072 Sum_probs=40.3
Q ss_pred HHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCC
Q 006091 536 SHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPL 603 (662)
Q Consensus 536 ~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~ 603 (662)
+.+++..+|+++--+..+..--.+..|+..|+|+|...+|.-.+.+....-.+ ...++++.++
T Consensus 67 l~~ll~~~DVVIDfT~p~a~~~~~~~al~~G~~vVigTTG~s~~~~~~L~~aa-----~~~~vv~a~N 129 (272)
T 4f3y_A 67 IERVCAEADYLIDFTLPEGTLVHLDAALRHDVKLVIGTTGFSEPQKAQLRAAG-----EKIALVFSAN 129 (272)
T ss_dssp HHHHHHHCSEEEECSCHHHHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHT-----TTSEEEECSC
T ss_pred HHHHhcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHh-----ccCCEEEECC
Confidence 44677899999987765544445667899999999987775444332211111 2467777654
No 78
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=54.73 E-value=84 Score=26.87 Aligned_cols=109 Identities=10% Similarity=0.092 Sum_probs=64.1
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhhcCC--cEEEEcCCChHHHHHHHH-----------hcCEEEEcCCC-CCCcHHHHHH
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEATYKD--KYRGWVGFNVPISHRITA-----------GCDILLMPSRF-EPCGLNQLYA 562 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~ll~-----------~aDi~v~PS~~-E~fgl~~lEA 562 (662)
..+++|+.+.+ .....+..+-..... .+.... +.......+. ..|++++-... +.-|+.+++.
T Consensus 4 ~~~ILivddd~-~~~~~l~~~L~~~g~~~~v~~~~--~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~~~~~ 80 (152)
T 3heb_A 4 SVTIVMIEDDL-GHARLIEKNIRRAGVNNEIIAFT--DGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGIDILKL 80 (152)
T ss_dssp -CEEEEECCCH-HHHHHHHHHHHHTTCCCCEEEES--SHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHHHHHH
T ss_pred CceEEEEeCCH-HHHHHHHHHHHhCCCcceEEEeC--CHHHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHHHHHH
Confidence 45777887764 333333333332222 333232 3333334442 46788776543 4568888888
Q ss_pred HHc-----CCcEEE-eCCccc---ccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHH
Q 006091 563 MRY-----GTIPVV-HATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 618 (662)
Q Consensus 563 ma~-----G~PvVa-s~~gg~---~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~ 618 (662)
+.. .+|+|+ |..... .+.+.. |..+++..|.+.+++.++|..+...
T Consensus 81 lr~~~~~~~~pii~~t~~~~~~~~~~~~~~----------g~~~~l~KP~~~~~l~~~i~~~~~~ 135 (152)
T 3heb_A 81 VKENPHTRRSPVVILTTTDDQREIQRCYDL----------GANVYITKPVNYENFANAIRQLGLF 135 (152)
T ss_dssp HHHSTTTTTSCEEEEESCCCHHHHHHHHHT----------TCSEEEECCSSHHHHHHHHHHHHHH
T ss_pred HHhcccccCCCEEEEecCCCHHHHHHHHHC----------CCcEEEeCCCCHHHHHHHHHHHHHH
Confidence 765 567777 333322 223333 6789999999999999999887653
No 79
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=54.64 E-value=9.2 Score=37.86 Aligned_cols=40 Identities=18% Similarity=0.148 Sum_probs=29.5
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCC
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 197 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~ 197 (662)
++||||+.+.... .+..+..|+++|.+ +|+|.|++|...+
T Consensus 10 ~~m~ILlTNDDGi-------~apGi~aL~~~l~~-~~~V~VVAP~~~~ 49 (261)
T 3ty2_A 10 PKLRLLLSNDDGV-------YAKGLAILAKTLAD-LGEVDVVAPDRNR 49 (261)
T ss_dssp -CCEEEEECSSCT-------TCHHHHHHHHHHTT-TSEEEEEEESSCC
T ss_pred CCCeEEEEcCCCC-------CCHHHHHHHHHHHh-cCCEEEEecCCCC
Confidence 4699998876522 24457888999988 7999999997544
No 80
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=54.55 E-value=38 Score=32.44 Aligned_cols=38 Identities=18% Similarity=0.166 Sum_probs=25.9
Q ss_pred CCceeEEEEeecccCccccCcHHHHHhhHHHHHHh-CCCcEEEEeecC
Q 006091 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSPRY 195 (662)
Q Consensus 149 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~-~GheV~Vit~~~ 195 (662)
.++|||+++.+ |.+.-...|..++.+ .+++|..|.++.
T Consensus 3 ~~~~riavl~S---------G~Gsnl~all~~~~~~~~~eI~~Vis~~ 41 (215)
T 3tqr_A 3 REPLPIVVLIS---------GNGTNLQAIIGAIQKGLAIEIRAVISNR 41 (215)
T ss_dssp -CCEEEEEEES---------SCCHHHHHHHHHHHTTCSEEEEEEEESC
T ss_pred CCCcEEEEEEe---------CCcHHHHHHHHHHHcCCCCEEEEEEeCC
Confidence 46799998763 446667778777766 467887776653
No 81
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=53.02 E-value=15 Score=32.40 Aligned_cols=38 Identities=24% Similarity=0.393 Sum_probs=31.1
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||+++... + +|....++..++..|.+.|++|.++...
T Consensus 2 ~ki~I~y~S--~---tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 39 (148)
T 3f6r_A 2 SKVLIVFGS--S---TGNTESIAQKLEELIAAGGHEVTLLNAA 39 (148)
T ss_dssp CEEEEEEEC--S---SSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred CeEEEEEEC--C---CchHHHHHHHHHHHHHhCCCeEEEEehh
Confidence 688877643 3 5888999999999999999999998644
No 82
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=52.37 E-value=1e+02 Score=25.79 Aligned_cols=107 Identities=10% Similarity=0.144 Sum_probs=63.7
Q ss_pred eEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH----hcCEEEEcCCC-CCCcHHHHHHHHc---CCcE
Q 006091 498 IQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA----GCDILLMPSRF-EPCGLNQLYAMRY---GTIP 569 (662)
Q Consensus 498 ~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~----~aDi~v~PS~~-E~fgl~~lEAma~---G~Pv 569 (662)
.+++|+.+.+ .....+..+-......+.... +.+.....+. ..|++++-... +.-|+.+++.+.. .+|+
T Consensus 4 ~~ilivdd~~-~~~~~l~~~l~~~g~~v~~~~--~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~i 80 (143)
T 3jte_A 4 AKILVIDDES-TILQNIKFLLEIDGNEVLTAS--SSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAV 80 (143)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHHTTCEEEEES--SHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEE
T ss_pred CEEEEEcCCH-HHHHHHHHHHHhCCceEEEeC--CHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeE
Confidence 4677777764 333333333333333333222 3333334444 57888876553 4567777766654 6777
Q ss_pred EE-eCCccc---ccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 570 VV-HATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 570 Va-s~~gg~---~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
|. +..... .+.+.. |..+++..|.+.+++..+|..++.
T Consensus 81 i~ls~~~~~~~~~~~~~~----------g~~~~l~kp~~~~~l~~~l~~~~~ 122 (143)
T 3jte_A 81 IILTGHGDLDNAILAMKE----------GAFEYLRKPVTAQDLSIAINNAIN 122 (143)
T ss_dssp EEEECTTCHHHHHHHHHT----------TCSEEEESSCCHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHh----------CcceeEeCCCCHHHHHHHHHHHHH
Confidence 76 333322 233343 778999999999999999998886
No 83
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=52.18 E-value=49 Score=28.18 Aligned_cols=67 Identities=16% Similarity=0.179 Sum_probs=43.9
Q ss_pred HhcCEEEEcCCC-CCCcHHHHHHHHc---CCcEEE-eCCccc---ccccccccccccCCCCccceEEECCCCHHHHHHHH
Q 006091 541 AGCDILLMPSRF-EPCGLNQLYAMRY---GTIPVV-HATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTAL 612 (662)
Q Consensus 541 ~~aDi~v~PS~~-E~fgl~~lEAma~---G~PvVa-s~~gg~---~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI 612 (662)
...|++++-... +.-|+.+++.+.. .+|+|. +..... .+.+.. |..+++..|.+.++|..+|
T Consensus 66 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~~~~~----------ga~~~l~Kp~~~~~L~~~i 135 (146)
T 4dad_A 66 DAFDILMIDGAALDTAELAAIEKLSRLHPGLTCLLVTTDASSQTLLDAMRA----------GVRDVLRWPLEPRALDDAL 135 (146)
T ss_dssp TTCSEEEEECTTCCHHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHTT----------TEEEEEESSCCHHHHHHHH
T ss_pred CCCCEEEEeCCCCCccHHHHHHHHHHhCCCCcEEEEeCCCCHHHHHHHHHh----------CCceeEcCCCCHHHHHHHH
Confidence 346777765543 3346666665543 677776 333322 223333 7789999999999999999
Q ss_pred HHHHH
Q 006091 613 RFAIR 617 (662)
Q Consensus 613 ~~~l~ 617 (662)
..++.
T Consensus 136 ~~~~~ 140 (146)
T 4dad_A 136 KRAAA 140 (146)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88875
No 84
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=51.81 E-value=16 Score=32.96 Aligned_cols=38 Identities=16% Similarity=0.156 Sum_probs=31.0
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||+++.. .+ +|....++..+++.|.+.|++|.++...
T Consensus 1 Mkv~IvY~--S~---tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 38 (161)
T 3hly_A 1 MSVLIGYL--SD---YGYSDRLSQAIGRGLVKTGVAVEMVDLR 38 (161)
T ss_dssp -CEEEEEC--TT---STTHHHHHHHHHHHHHHTTCCEEEEETT
T ss_pred CEEEEEEE--CC---ChHHHHHHHHHHHHHHhCCCeEEEEECC
Confidence 88888754 34 5999999999999999999999988543
No 85
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=51.62 E-value=1.1e+02 Score=25.77 Aligned_cols=111 Identities=8% Similarity=0.012 Sum_probs=66.0
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhhcCCc-EEEEcCCChHHHHHHHH--hcCEEEEcCCC-CCCcHHHHHHHHc-----CC
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEATYKDK-YRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMRY-----GT 567 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~ll~--~aDi~v~PS~~-E~fgl~~lEAma~-----G~ 567 (662)
..+++|+.+.. .....+..+-...... .+.... +.+.....+. ..|++++-... +.-|+.+++.+.. .+
T Consensus 5 ~~~ILivdd~~-~~~~~l~~~L~~~~~~~~v~~~~-~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~ 82 (144)
T 3kht_A 5 SKRVLVVEDNP-DDIALIRRVLDRKDIHCQLEFVD-NGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHT 82 (144)
T ss_dssp CEEEEEECCCH-HHHHHHHHHHHHTTCCEEEEEES-SHHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTC
T ss_pred CCEEEEEeCCH-HHHHHHHHHHHhcCCCeeEEEEC-CHHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCC
Confidence 46777887764 3333333333332223 122222 3333334443 46888776553 4568888888775 57
Q ss_pred cEEEe-CCcccc---cccccccccccCCCCccceEEECCC-CHHHHHHHHHHHHHHh
Q 006091 568 IPVVH-ATGGLR---DTVENFNPFAREGSGEGTGWSFLPL-SEESMLTALRFAIRTY 619 (662)
Q Consensus 568 PvVas-~~gg~~---eii~~~~~~~~~~~~~~~G~l~~~~-d~~~la~aI~~~l~~~ 619 (662)
|+|+- ...... +.+.. |..+++..|. +.+++.++|..+++.+
T Consensus 83 pii~~s~~~~~~~~~~~~~~----------ga~~~l~Kp~~~~~~l~~~i~~~l~~~ 129 (144)
T 3kht_A 83 PIVILTDNVSDDRAKQCMAA----------GASSVVDKSSNNVTDFYGRIYAIFSYW 129 (144)
T ss_dssp CEEEEETTCCHHHHHHHHHT----------TCSEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHc----------CCCEEEECCCCcHHHHHHHHHHHHHHH
Confidence 78774 332222 22333 7789999999 9999999999988743
No 86
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=50.62 E-value=1.2e+02 Score=26.08 Aligned_cols=107 Identities=9% Similarity=0.035 Sum_probs=59.0
Q ss_pred eEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH----hcCEEEEcCCC-CCCcHHHHHHHHc---CCcE
Q 006091 498 IQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA----GCDILLMPSRF-EPCGLNQLYAMRY---GTIP 569 (662)
Q Consensus 498 ~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~----~aDi~v~PS~~-E~fgl~~lEAma~---G~Pv 569 (662)
.+++|+.+.. .....+..+-......+..... +.......+. ..|++++-... +.-|+.+++.+.. .+|+
T Consensus 37 ~~Ilivdd~~-~~~~~l~~~L~~~g~~v~~~~~-~~~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~i 114 (157)
T 3hzh_A 37 FNVLIVDDSV-FTVKQLTQIFTSEGFNIIDTAA-DGEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNARV 114 (157)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCE
T ss_pred eEEEEEeCCH-HHHHHHHHHHHhCCCeEEEEEC-CHHHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCcE
Confidence 4666666653 2333333322222333332222 3332333333 34888876553 4567777766653 6777
Q ss_pred EEe-CCcccc---cccccccccccCCCCccceEEECCCCHHHHHHHHHHHH
Q 006091 570 VVH-ATGGLR---DTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAI 616 (662)
Q Consensus 570 Vas-~~gg~~---eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l 616 (662)
|+. ...... +.+.. |..+++..|.+.+++.++|..++
T Consensus 115 i~ls~~~~~~~~~~~~~~----------g~~~~l~KP~~~~~l~~~i~~~l 155 (157)
T 3hzh_A 115 IMISALGKEQLVKDCLIK----------GAKTFIVKPLDRAKVLQRVMSVF 155 (157)
T ss_dssp EEEESCCCHHHHHHHHHT----------TCSEEEESSCCHHHHHHHHHHTT
T ss_pred EEEeccCcHHHHHHHHHc----------CCCEEEeCCCCHHHHHHHHHHHh
Confidence 773 332222 22333 67899999999999999888765
No 87
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=49.87 E-value=18 Score=30.30 Aligned_cols=40 Identities=23% Similarity=0.188 Sum_probs=30.4
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhC-CC-cEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR-GH-RVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~-Gh-eV~Vit~~ 194 (662)
||++++... .|+ ..........++.++.+. || +|.|+-..
T Consensus 2 ~k~~ii~~~-~p~--~~~~~~~al~~a~~~~~~~g~~~v~vff~~ 43 (117)
T 1jx7_A 2 QKIVIVANG-APY--GSESLFNSLRLAIALREQESNLDLRLFLMS 43 (117)
T ss_dssp CEEEEEECC-CTT--TCSHHHHHHHHHHHHHHHCTTCEEEEEECG
T ss_pred cEEEEEEcC-CCC--CcHHHHHHHHHHHHHHhcCCCccEEEEEEc
Confidence 478888874 565 344566689999999999 99 99998644
No 88
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=49.25 E-value=1.2e+02 Score=25.78 Aligned_cols=110 Identities=8% Similarity=0.110 Sum_probs=60.7
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHh---cCEEEEcCCC-CCCcHHHHHHHHc---CCcE
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAG---CDILLMPSRF-EPCGLNQLYAMRY---GTIP 569 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~---aDi~v~PS~~-E~fgl~~lEAma~---G~Pv 569 (662)
.++++++.+.+.....+...+........+.... +.+.....+.. .|++++-... +.-|+.+++.+.. .+|+
T Consensus 3 ~~~iLivdd~~~~~~~l~~~L~~~~g~~~v~~~~-~~~~a~~~l~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~i 81 (154)
T 2qsj_A 3 LTVVLIVDDHHLIRAGAKNLLEGAFSGMRVEGAE-TVSDALAFLEADNTVDLILLDVNLPDAEAIDGLVRLKRFDPSNAV 81 (154)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHHHCTTEEEEEES-SHHHHHHHHHTTCCCSEEEECC------CHHHHHHHHHHCTTSEE
T ss_pred ccEEEEEcCCHHHHHHHHHHHHhCCCceEEEEec-CHHHHHHHHhccCCCCEEEEeCCCCCCchHHHHHHHHHhCCCCeE
Confidence 3567777776433333333333331222232332 33334455544 6888876543 3457777776653 6788
Q ss_pred EEe-CCcc---cccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 570 VVH-ATGG---LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 570 Vas-~~gg---~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
|.- .... ..+.+.. |..+++..|.+.+++.++|..++.
T Consensus 82 i~ls~~~~~~~~~~~~~~----------g~~~~l~kp~~~~~L~~~l~~~~~ 123 (154)
T 2qsj_A 82 ALISGETDHELIRAALEA----------GADGFIPKSADPQVLIHAVSLILE 123 (154)
T ss_dssp EEC-----CHHHHHHHHT----------TCCBBCCTTSCHHHHHHHHHHHHT
T ss_pred EEEeCCCCHHHHHHHHHc----------cCCEEEeCCCCHHHHHHHHHHHHc
Confidence 774 3222 1222333 678899999999999999998876
No 89
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=49.05 E-value=20 Score=31.44 Aligned_cols=42 Identities=12% Similarity=-0.094 Sum_probs=31.8
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
..+|+++|... .|| ...-......+|...++.||+|.|+-..
T Consensus 14 ~~~kl~ii~~s-gP~--~~~~~~~al~lA~~A~a~g~eV~vFf~~ 55 (134)
T 3mc3_A 14 QXXXILIVVTH-GPE--DLDRTYAPLFMASISASMEYETSVFFMI 55 (134)
T ss_dssp CCCEEEEEECC-CGG--GTHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred ccceEEEEEcc-CCC--CHHHHHHHHHHHHHHHHCCCCEEEEEEe
Confidence 35788888875 454 3456667788899999999999998644
No 90
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=48.56 E-value=1.2e+02 Score=25.48 Aligned_cols=110 Identities=4% Similarity=0.056 Sum_probs=66.7
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH--hcCEEEEcCCC-CCCcHHHHHHHHc-----CCc
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMRY-----GTI 568 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~--~aDi~v~PS~~-E~fgl~~lEAma~-----G~P 568 (662)
..+++++.+.+.....+...+... ...+. .. .+.......+. ..|++++-... +.-|+.+++.+.. .+|
T Consensus 8 ~~~iLivd~~~~~~~~l~~~L~~~-g~~v~-~~-~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~p 84 (147)
T 2zay_A 8 WWRIMLVDTQLPALAASISALSQE-GFDII-QC-GNAIEAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIP 84 (147)
T ss_dssp CEEEEEECTTGGGGHHHHHHHHHH-TEEEE-EE-SSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSC
T ss_pred CceEEEEeCCHHHHHHHHHHHHHc-CCeEE-Ee-CCHHHHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCC
Confidence 567788877654444444444432 22333 22 13333333433 47888876554 4567888888775 577
Q ss_pred EEE-eCCcccc---cccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHh
Q 006091 569 PVV-HATGGLR---DTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTY 619 (662)
Q Consensus 569 vVa-s~~gg~~---eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~ 619 (662)
+|+ +...... +.+.. |..+++..|.+.+++..+|..++...
T Consensus 85 ii~ls~~~~~~~~~~~~~~----------g~~~~l~kp~~~~~L~~~i~~~~~~~ 129 (147)
T 2zay_A 85 VIALSGRATAKEEAQLLDM----------GFIDFIAKPVNAIRLSARIKRVLKLL 129 (147)
T ss_dssp EEEEESSCCHHHHHHHHHH----------TCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHhC----------CCCEEEeCCCCHHHHHHHHHHHHHHH
Confidence 776 4433222 22333 67899999999999999999888743
No 91
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=48.34 E-value=1.3e+02 Score=25.77 Aligned_cols=110 Identities=8% Similarity=0.034 Sum_probs=65.0
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH--hcCEEEEcCCC-CCCcHHHHHHHHc-----CCc
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMRY-----GTI 568 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~--~aDi~v~PS~~-E~fgl~~lEAma~-----G~P 568 (662)
..+++|+.+.+ .....+..+-......+. .. .+.+.....+. ..|++++-... +.-|+.+++.+.. .+|
T Consensus 7 ~~~ILivdd~~-~~~~~l~~~L~~~g~~v~-~~-~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~p 83 (154)
T 3gt7_A 7 AGEILIVEDSP-TQAEHLKHILEETGYQTE-HV-RNGREAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIP 83 (154)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHTTTCEEE-EE-SSHHHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSC
T ss_pred CCcEEEEeCCH-HHHHHHHHHHHHCCCEEE-Ee-CCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCC
Confidence 46777777764 333333333222222332 22 13333334443 46888876654 4568888887763 567
Q ss_pred EEE-eCCcccc---cccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHh
Q 006091 569 PVV-HATGGLR---DTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTY 619 (662)
Q Consensus 569 vVa-s~~gg~~---eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~ 619 (662)
+|+ +...... +.+.. |..+++..|.+.+++..+|..++...
T Consensus 84 ii~~s~~~~~~~~~~~~~~----------g~~~~l~KP~~~~~l~~~i~~~l~~~ 128 (154)
T 3gt7_A 84 VILLTILSDPRDVVRSLEC----------GADDFITKPCKDVVLASHVKRLLSGV 128 (154)
T ss_dssp EEEEECCCSHHHHHHHHHH----------CCSEEEESSCCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCChHHHHHHHHC----------CCCEEEeCCCCHHHHHHHHHHHHHHH
Confidence 776 3333222 23333 67899999999999999999998753
No 92
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=47.89 E-value=1.2e+02 Score=25.03 Aligned_cols=108 Identities=6% Similarity=-0.036 Sum_probs=61.6
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH--hcCEEEEcCCC-CCCcHHHHHHHHc-----CCc
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMRY-----GTI 568 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~--~aDi~v~PS~~-E~fgl~~lEAma~-----G~P 568 (662)
..+++|+.+.. .....++.+-. ....+. .. .+.+.....+. ..|++++-... +.-|+.+++.+.. .+|
T Consensus 4 ~~~ilivdd~~-~~~~~l~~~l~-~~~~v~-~~-~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~p 79 (133)
T 3nhm_A 4 KPKVLIVENSW-TMRETLRLLLS-GEFDCT-TA-ADGASGLQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIP 79 (133)
T ss_dssp -CEEEEECSCH-HHHHHHHHHHT-TTSEEE-EE-SSHHHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCC
T ss_pred CCEEEEEcCCH-HHHHHHHHHHh-CCcEEE-EE-CCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCC
Confidence 34677776653 33333333322 222222 22 13333333443 46887776543 4567888877765 677
Q ss_pred EEEe-CCccc--ccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHH
Q 006091 569 PVVH-ATGGL--RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 618 (662)
Q Consensus 569 vVas-~~gg~--~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~ 618 (662)
+|.. ..... .+.+.. |..+++..|.+.+++.++|..++..
T Consensus 80 ii~~s~~~~~~~~~~~~~----------g~~~~l~KP~~~~~l~~~i~~~l~~ 122 (133)
T 3nhm_A 80 VIFVSGYAPRTEGPADQP----------VPDAYLVKPVKPPVLIAQLHALLAR 122 (133)
T ss_dssp EEEEESCCC-----TTSC----------CCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHhHHHHhhc----------CCceEEeccCCHHHHHHHHHHHHhh
Confidence 7773 32211 122222 6788999999999999999998874
No 93
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=47.43 E-value=14 Score=36.44 Aligned_cols=39 Identities=26% Similarity=0.291 Sum_probs=29.6
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCC
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 197 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~ 197 (662)
+||||+.+.... .+..+..|+++|.+.| +|.|++|...+
T Consensus 1 ~M~ILlTNDDGi-------~apGi~aL~~~l~~~g-~V~VVAP~~~~ 39 (251)
T 2phj_A 1 MPTFLLVNDDGY-------FSPGINALREALKSLG-RVVVVAPDRNL 39 (251)
T ss_dssp -CEEEEECSSCT-------TCHHHHHHHHHHTTTS-EEEEEEESSCC
T ss_pred CCEEEEECCCCC-------CCHHHHHHHHHHHhcC-CEEEEecCCCc
Confidence 499998876521 2445788999999998 99999997544
No 94
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=47.04 E-value=15 Score=38.12 Aligned_cols=37 Identities=22% Similarity=0.382 Sum_probs=29.2
Q ss_pred eeEEEEeecccCccccCcHHH--HHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~--~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||+.|++. .||+|+ .+.+||..|++.|++|.+|-..
T Consensus 1 MkvIav~s~------KGGvGKTT~a~nLA~~LA~~G~rVLlID~D 39 (361)
T 3pg5_A 1 MRTISFFNN------KGGVGKTTLSTNVAHYFALQGKRVLYVDCD 39 (361)
T ss_dssp CEEEEBCCS------SCCHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEcC------CCCCcHHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 777766642 577765 7788999999999999999655
No 95
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=46.99 E-value=1.3e+02 Score=25.18 Aligned_cols=106 Identities=7% Similarity=0.048 Sum_probs=56.8
Q ss_pred eEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHH--HhcCEEEEcCCC-CCCcHHHHHHHH-----cCCcE
Q 006091 498 IQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT--AGCDILLMPSRF-EPCGLNQLYAMR-----YGTIP 569 (662)
Q Consensus 498 ~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll--~~aDi~v~PS~~-E~fgl~~lEAma-----~G~Pv 569 (662)
.+++|+.+.. .....+..+-... ..+. .. .+.......+ ...|++++-... +.-|+.+++.+. ..+|+
T Consensus 4 ~~iLivdd~~-~~~~~l~~~l~~~-~~v~-~~-~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~i 79 (140)
T 3n53_A 4 KKILIIDQQD-FSRIELKNFLDSE-YLVI-ES-KNEKEALEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPL 79 (140)
T ss_dssp CEEEEECSCH-HHHHHHHHHHTTT-SEEE-EE-SSHHHHHHHHHHHCCSEEEEETTC------CHHHHHHTSTTCTTCCE
T ss_pred CEEEEEeCCH-HHHHHHHHHHHhc-ceEE-Ee-CCHHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCE
Confidence 4566776653 3333333332222 2222 22 1333333333 246888776543 445666776666 46787
Q ss_pred EEe-CCccc---ccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 570 VVH-ATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 570 Vas-~~gg~---~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
|.- ..... .+.+.. |..+++..|.+.+++.++|..++.
T Consensus 80 i~~s~~~~~~~~~~~~~~----------g~~~~l~KP~~~~~l~~~i~~~~~ 121 (140)
T 3n53_A 80 ILLFSSEHKEAIVNGLHS----------GADDYLTKPFNRNDLLSRIEIHLR 121 (140)
T ss_dssp EEEECC----CTTTTTTC----------CCSEEEESSCCHHHHHHHHHHHHH
T ss_pred EEEecCCCHHHHHHHHhc----------CCCeeeeCCCCHHHHHHHHHHHHh
Confidence 773 33222 222332 678999999999999999998876
No 96
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=46.89 E-value=24 Score=30.12 Aligned_cols=38 Identities=24% Similarity=0.142 Sum_probs=29.1
Q ss_pred eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 153 kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
|++++... .|| ..-.+.-..+++.++.+.||+|.|+-.
T Consensus 3 k~~~vv~~-~P~--g~~~~~~al~~a~a~~a~~~~v~vff~ 40 (119)
T 2d1p_B 3 RIAFVFST-APH--GTAAGREGLDALLATSALTDDLAVFFI 40 (119)
T ss_dssp CEEEEECS-CTT--TSTHHHHHHHHHHHHHTTCSCEEEEEC
T ss_pred EEEEEEcC-CCC--CcHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 58888875 675 233556778999999999999999853
No 97
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=46.57 E-value=15 Score=39.65 Aligned_cols=38 Identities=21% Similarity=0.269 Sum_probs=30.7
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
++||+++.. | ..|=-.-+..|++.|+++||+|+++++.
T Consensus 8 ~~~vl~~p~---p---~~GHi~P~l~La~~L~~rG~~VT~v~t~ 45 (482)
T 2pq6_A 8 KPHVVMIPY---P---VQGHINPLFKLAKLLHLRGFHITFVNTE 45 (482)
T ss_dssp CCEEEEECC---S---SHHHHHHHHHHHHHHHHTTCEEEEEEEH
T ss_pred CCEEEEecC---c---cchhHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 478998863 4 2455667899999999999999999876
No 98
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=46.46 E-value=15 Score=35.90 Aligned_cols=36 Identities=28% Similarity=0.396 Sum_probs=27.5
Q ss_pred eeEEEEeecccCccccCcH--HHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGL--GDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~--~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||+.|+. .||+ .+.+.+||.+|+++|++|.+|=..
T Consensus 1 M~vI~vs~-------KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 1 MRQVAIYG-------KGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp CEEEEEEE-------CTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred CcEEEEec-------CCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 67666653 2555 457889999999999999999654
No 99
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=45.56 E-value=13 Score=40.34 Aligned_cols=40 Identities=15% Similarity=0.054 Sum_probs=30.5
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhC-CCcEEEEeecC
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR-GHRVMVVSPRY 195 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~-GheV~Vit~~~ 195 (662)
++|+|+++.. | ..|=-.-+..|++.|+++ ||+|+++++..
T Consensus 5 ~~~~vl~~p~---p---~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~ 45 (480)
T 2vch_A 5 KTPHVAIIPS---P---GMGHLIPLVEFAKRLVHLHGLTVTFVIAGE 45 (480)
T ss_dssp -CCEEEEECC---S---CHHHHHHHHHHHHHHHHHHCCEEEEEECCS
T ss_pred CCcEEEEecC---c---chhHHHHHHHHHHHHHhCCCCEEEEEECCC
Confidence 4588888863 4 245556678999999998 99999998763
No 100
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=45.35 E-value=97 Score=29.02 Aligned_cols=129 Identities=12% Similarity=0.031 Sum_probs=64.8
Q ss_pred cCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCC----------------C-hHHHHHHHHhc
Q 006091 481 KGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF----------------N-VPISHRITAGC 543 (662)
Q Consensus 481 Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~----------------~-~~~~~~ll~~a 543 (662)
.+.+...+..+.|.+.++.+|- |.+...+...-+.. .......++.++. . .+.-..+...|
T Consensus 42 ~~~~~A~~lg~~LA~~G~~vVs-Gg~~GiM~aa~~gA-l~~GG~~iGVlP~e~~~~~~~~~~~~~~~~f~~Rk~~m~~~s 119 (195)
T 1rcu_A 42 ELRDICLELGRTLAKKGYLVFN-GGRDGVMELVSQGV-REAGGTVVGILPDEEAGNPYLSVAVKTGLDFQMRSFVLLRNA 119 (195)
T ss_dssp GGHHHHHHHHHHHHHTTCEEEE-CCSSHHHHHHHHHH-HHTTCCEEEEESTTCCCCTTCSEEEECCCCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHCCCEEEe-CCHHHHHHHHHHHH-HHcCCcEEEEeCCcccCCCCcceeeecCCCHHHHHHHHHHhC
Confidence 5666666666666666776554 75544343333332 2222233333221 1 11122355688
Q ss_pred CEEEEcCCCCCCcH--HHHHHHHcCCcEEEeC-Ccccccccccccccc-cCCCCccceEEECCCCHHHHHHHHHH
Q 006091 544 DILLMPSRFEPCGL--NQLYAMRYGTIPVVHA-TGGLRDTVENFNPFA-REGSGEGTGWSFLPLSEESMLTALRF 614 (662)
Q Consensus 544 Di~v~PS~~E~fgl--~~lEAma~G~PvVas~-~gg~~eii~~~~~~~-~~~~~~~~G~l~~~~d~~~la~aI~~ 614 (662)
|.+|... .++|. .+.||+..++||++-+ .|...+.+...-.+. -.++....-+.+ ..|++++.+.|++
T Consensus 120 da~Ivlp--GG~GTL~E~~eal~~~kPV~lln~~g~w~~~l~~~~~~G~fi~~~~~~~i~~-~~~~ee~~~~l~~ 191 (195)
T 1rcu_A 120 DVVVSIG--GEIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLDNRRIVEIHQ-AWTVEEAVQIIEQ 191 (195)
T ss_dssp SEEEEES--CCHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSSTTCCSCEEE-ESSHHHHHHHHHT
T ss_pred CEEEEec--CCCcHHHHHHHHHhcCCCEEEECCCCccHHHHHHHHHcCCcCCHHHcCeEEE-eCCHHHHHHHHHH
Confidence 8877543 24554 5689999999999986 444433432210000 000111223333 3578887777654
No 101
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=45.06 E-value=18 Score=36.43 Aligned_cols=64 Identities=17% Similarity=0.045 Sum_probs=39.2
Q ss_pred HHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCC
Q 006091 536 SHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLS 604 (662)
Q Consensus 536 ~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d 604 (662)
+.+++..+|+++--+..+..--.+..++..|+|+|...+|...+......-.+ ...++++.++=
T Consensus 82 l~~ll~~aDVvIDFT~p~a~~~~~~~~l~~Gv~vViGTTG~~~e~~~~L~~aa-----~~~~~~~a~N~ 145 (288)
T 3ijp_A 82 PESAFSNTEGILDFSQPQASVLYANYAAQKSLIHIIGTTGFSKTEEAQIADFA-----KYTTIVKSGNM 145 (288)
T ss_dssp HHHHTTSCSEEEECSCHHHHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHH-----TTSEEEECSCC
T ss_pred HHHHhcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHh-----CcCCEEEECCC
Confidence 44677899999966654433334566889999999987775443322111111 24677776643
No 102
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=45.04 E-value=1.4e+02 Score=25.27 Aligned_cols=66 Identities=18% Similarity=0.204 Sum_probs=45.5
Q ss_pred hcCEEEEcCCC-CCCcHHHHHHHHc---CCcEEE-eCCcc---cccccccccccccCCCCccceEEECCCCHHHHHHHHH
Q 006091 542 GCDILLMPSRF-EPCGLNQLYAMRY---GTIPVV-HATGG---LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALR 613 (662)
Q Consensus 542 ~aDi~v~PS~~-E~fgl~~lEAma~---G~PvVa-s~~gg---~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~ 613 (662)
..|++++-... +.-|+.+++.+.. .+|+|. +.... ..+.+.. |..+++..|.+.+++.++|.
T Consensus 66 ~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~----------g~~~~l~Kp~~~~~l~~~i~ 135 (150)
T 4e7p_A 66 SVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKRAGYFERAVKA----------GVDAYVLKERSIADLMQTLH 135 (150)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHT----------TCSEEEETTSCHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHC----------CCcEEEecCCCHHHHHHHHH
Confidence 46777776543 4567777777664 567776 33322 2233333 77899999999999999999
Q ss_pred HHHH
Q 006091 614 FAIR 617 (662)
Q Consensus 614 ~~l~ 617 (662)
.++.
T Consensus 136 ~~~~ 139 (150)
T 4e7p_A 136 TVLE 139 (150)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 8875
No 103
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=44.46 E-value=22 Score=31.35 Aligned_cols=40 Identities=18% Similarity=0.088 Sum_probs=30.4
Q ss_pred ce-eEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 151 SY-NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 151 ~M-kIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
.| ||+++.. ..|| ..-...-..+++.++.+.||+|.|+-.
T Consensus 4 ~Mkk~~ivv~-~~P~--g~~~~~~al~~a~a~~a~~~~v~Vff~ 44 (136)
T 2hy5_B 4 VVKKFMYLNR-KAPY--GTIYAWEALEVVLIGAAFDQDVCVLFL 44 (136)
T ss_dssp -CCEEEEEEC-SCTT--TSSHHHHHHHHHHHHGGGCCEEEEEEC
T ss_pred chhEEEEEEe-CCCC--CcHHHHHHHHHHHHHHhCCCCEEEEEE
Confidence 36 5888886 4676 233666789999999999999999854
No 104
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=44.17 E-value=52 Score=31.39 Aligned_cols=34 Identities=15% Similarity=0.162 Sum_probs=23.5
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCC--cEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGH--RVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~Gh--eV~Vit~~ 194 (662)
|||+++.+ |.+.....+..+|.+.+| +|..|..+
T Consensus 2 ~rI~vl~S---------G~g~~~~~~l~~l~~~~~~~~i~~Vvs~ 37 (216)
T 2ywr_A 2 LKIGVLVS---------GRGSNLQAIIDAIESGKVNASIELVISD 37 (216)
T ss_dssp EEEEEEEC---------SCCHHHHHHHHHHHTTSSCEEEEEEEES
T ss_pred CEEEEEEe---------CCcHHHHHHHHHHHhCCCCCeEEEEEeC
Confidence 79998863 334567788888988888 65544444
No 105
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=43.58 E-value=1.5e+02 Score=25.13 Aligned_cols=109 Identities=6% Similarity=-0.034 Sum_probs=62.9
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhhcCC-cEEEEcCCChHHHHHHHH---------hcCEEEEcCCC-CCCcHHHHHHHHc
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEATYKD-KYRGWVGFNVPISHRITA---------GCDILLMPSRF-EPCGLNQLYAMRY 565 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~ll~---------~aDi~v~PS~~-E~fgl~~lEAma~ 565 (662)
..+++++.+.+ .....+..+-..... ..+.... +.......+. ..|++++--.. +.-|+.+++.+..
T Consensus 8 ~~~ILivdd~~-~~~~~l~~~L~~~~~~~~v~~~~-~~~~al~~l~~~~~~~~~~~~dlillD~~lp~~~g~~l~~~l~~ 85 (149)
T 1i3c_A 8 PKVILLVEDSK-ADSRLVQEVLKTSTIDHELIILR-DGLAAMAFLQQQGEYENSPRPNLILLDLNLPKKDGREVLAEIKQ 85 (149)
T ss_dssp CEEEEEECCCH-HHHHHHHHHHHSCCSCEEEEEEC-SHHHHHHHHTTCGGGTTCCCCSEEEECSCCSSSCHHHHHHHHHH
T ss_pred CCeEEEEECCH-HHHHHHHHHHHhcCCCccEEEeC-CHHHHHHHHHhccccccCCCCCEEEEeCCCCCCcHHHHHHHHHh
Confidence 46777777764 333333333222221 1222222 3333334554 36888876544 3457888887763
Q ss_pred -----CCcEEE-eCCcccc---cccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 566 -----GTIPVV-HATGGLR---DTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 566 -----G~PvVa-s~~gg~~---eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
.+|+|. |...... +.+.. |..+++..|.+.+++.++|+.++.
T Consensus 86 ~~~~~~~piiils~~~~~~~~~~~~~~----------ga~~~l~KP~~~~~L~~~i~~~~~ 136 (149)
T 1i3c_A 86 NPDLKRIPVVVLTTSHNEDDVIASYEL----------HVNCYLTKSRNLKDLFKMVQGIES 136 (149)
T ss_dssp CTTTTTSCEEEEESCCCHHHHHHHHHT----------TCSEEEECCSSHHHHHHHHHHHHH
T ss_pred CcCcCCCeEEEEECCCChHHHHHHHHc----------CCcEEEECCCCHHHHHHHHHHHHH
Confidence 467766 4433222 22333 678999999999999999987765
No 106
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=42.73 E-value=22 Score=31.10 Aligned_cols=38 Identities=18% Similarity=0.157 Sum_probs=30.6
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||+++.. .+ +|....++..+++.|.+.|++|.++...
T Consensus 1 mki~iiy~--S~---~Gnt~~~a~~i~~~l~~~g~~v~~~~~~ 38 (147)
T 1f4p_A 1 PKALIVYG--ST---TGNTEYTAETIARELADAGYEVDSRDAA 38 (147)
T ss_dssp CEEEEEEE--CS---SSHHHHHHHHHHHHHHHHTCEEEEEEGG
T ss_pred CeEEEEEE--CC---cCHHHHHHHHHHHHHHhcCCeeEEEehh
Confidence 78887754 34 5888889999999999999999988543
No 107
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=42.68 E-value=27 Score=32.21 Aligned_cols=37 Identities=19% Similarity=0.295 Sum_probs=28.9
Q ss_pred eeEEEEeecccCccccCc--HHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGG--LGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG--~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||+.|++. .|| -.+.+.+||..|+++|++|.+|-..
T Consensus 1 M~vi~v~s~------kgG~GKTt~a~~la~~la~~g~~vlliD~D 39 (206)
T 4dzz_A 1 MKVISFLNP------KGGSGKTTAVINIATALSRSGYNIAVVDTD 39 (206)
T ss_dssp CEEEEECCS------STTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEeC------CCCccHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 787777652 344 4568889999999999999999654
No 108
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=42.64 E-value=1.5e+02 Score=24.79 Aligned_cols=109 Identities=14% Similarity=0.120 Sum_probs=64.5
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH---hcCEEEEcCCC-C-CCcHHHHHHHH--cCCcE
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA---GCDILLMPSRF-E-PCGLNQLYAMR--YGTIP 569 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~---~aDi~v~PS~~-E-~fgl~~lEAma--~G~Pv 569 (662)
..+++|+.+.+ .....+..+-......+.... +.......+. ..|++++-... + .-|+.+++.+. ..+|+
T Consensus 5 ~~~ilivdd~~-~~~~~l~~~L~~~g~~v~~~~--~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~i 81 (140)
T 3h5i_A 5 DKKILIVEDSK-FQAKTIANILNKYGYTVEIAL--TGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQISELPV 81 (140)
T ss_dssp -CEEEEECSCH-HHHHHHHHHHHHTTCEEEEES--SHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCE
T ss_pred CcEEEEEeCCH-HHHHHHHHHHHHcCCEEEEec--ChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCE
Confidence 45677777764 333333333333333333222 3333334453 35888876654 4 56777777665 37788
Q ss_pred EEe-CCccc---ccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHH
Q 006091 570 VVH-ATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 618 (662)
Q Consensus 570 Vas-~~gg~---~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~ 618 (662)
|+- ..... .+.+.. |..+++..|.+.+++.++|..+++.
T Consensus 82 i~ls~~~~~~~~~~~~~~----------g~~~~l~KP~~~~~l~~~i~~~l~~ 124 (140)
T 3h5i_A 82 VFLTAHTEPAVVEKIRSV----------TAYGYVMKSATEQVLITIVEMALRL 124 (140)
T ss_dssp EEEESSSSCCCCGGGGGS----------CEEEEEETTCCHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHhC----------CCcEEEeCCCCHHHHHHHHHHHHHH
Confidence 773 33222 223333 6789999999999999999988863
No 109
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=42.38 E-value=1.2e+02 Score=23.88 Aligned_cols=105 Identities=14% Similarity=0.009 Sum_probs=58.3
Q ss_pred EEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH--hcCEEEEcCCC-CCCcHHHHHHHH-----cCCcEE
Q 006091 499 QFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMR-----YGTIPV 570 (662)
Q Consensus 499 ~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~--~aDi~v~PS~~-E~fgl~~lEAma-----~G~PvV 570 (662)
+++++.+.+.....+...+. .....+.... +.+.....+. ..|++++-... +.-|+.+++.+. ..+|+|
T Consensus 3 ~iliv~~~~~~~~~l~~~l~-~~g~~v~~~~--~~~~~~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii 79 (119)
T 2j48_A 3 HILLLEEEDEAATVVCEMLT-AAGFKVIWLV--DGSTALDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLV 79 (119)
T ss_dssp EEEEECCCHHHHHHHHHHHH-HTTCEEEEES--CHHHHHHHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCE
T ss_pred EEEEEeCCHHHHHHHHHHHH-hCCcEEEEec--CHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEE
Confidence 56677666433333333333 2233333222 3333323333 46887776543 456778888776 456777
Q ss_pred E-eCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHH
Q 006091 571 V-HATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAI 616 (662)
Q Consensus 571 a-s~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l 616 (662)
+ +......+.+.. |..+++..|.+.+++.++|..++
T Consensus 80 ~~~~~~~~~~~~~~----------g~~~~l~kp~~~~~l~~~l~~~~ 116 (119)
T 2j48_A 80 LFLGEPPVDPLLTA----------QASAILSKPLDPQLLLTTLQGLC 116 (119)
T ss_dssp EEESSCCSSHHHHH----------HCSEECSSCSTTHHHHHHHHTTC
T ss_pred EEeCCCCchhhhhc----------CHHHhccCCCCHHHHHHHHHHHh
Confidence 6 333322233333 66788889989998888886543
No 110
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=42.31 E-value=1.5e+02 Score=24.73 Aligned_cols=110 Identities=9% Similarity=0.075 Sum_probs=63.6
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhhcCC-cEEEEcCCChHHHHHHHH------------hcCEEEEcCCC-CCCcHHHHHH
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEATYKD-KYRGWVGFNVPISHRITA------------GCDILLMPSRF-EPCGLNQLYA 562 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~ll~------------~aDi~v~PS~~-E~fgl~~lEA 562 (662)
..+++++.+.+.....+...+...... .+.... +.+.....+. ..|++++-... +.-|+.+++.
T Consensus 6 ~~~iLivdd~~~~~~~l~~~L~~~g~~~~v~~~~--~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~ 83 (149)
T 1k66_A 6 TQPLLVVEDSDEDFSTFQRLLQREGVVNPIYRCI--TGDQALDFLYQTGSYCNPDIAPRPAVILLDLNLPGTDGREVLQE 83 (149)
T ss_dssp TSCEEEECCCHHHHHHHHHHHHHTTBCSCEEEEC--SHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCCSSSCHHHHHHH
T ss_pred CccEEEEECCHHHHHHHHHHHHHcCCCceEEEEC--CHHHHHHHHHhcccccCcccCCCCcEEEEECCCCCCCHHHHHHH
Confidence 456777776643333333333332211 333222 3333334554 36888876554 4567888887
Q ss_pred HH-----cCCcEEEe-CCccc---ccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHH
Q 006091 563 MR-----YGTIPVVH-ATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 618 (662)
Q Consensus 563 ma-----~G~PvVas-~~gg~---~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~ 618 (662)
+. ..+|+|+- ..... .+.+.. |..+++..|.+.+++.++|..++..
T Consensus 84 l~~~~~~~~~~ii~~t~~~~~~~~~~~~~~----------g~~~~l~kP~~~~~l~~~i~~~~~~ 138 (149)
T 1k66_A 84 IKQDEVLKKIPVVIMTTSSNPKDIEICYSY----------SISSYIVKPLEIDRLTETVQTFIKY 138 (149)
T ss_dssp HTTSTTGGGSCEEEEESCCCHHHHHHHHHT----------TCSEEEECCSSHHHHHHHHHHHHHH
T ss_pred HHhCcccCCCeEEEEeCCCCHHHHHHHHHC----------CCCEEEeCCCCHHHHHHHHHHHHHH
Confidence 76 35677763 33322 222333 6789999999999999999888763
No 111
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=41.85 E-value=22 Score=33.92 Aligned_cols=36 Identities=25% Similarity=0.084 Sum_probs=29.2
Q ss_pred ceeEEEEeecccCccccCcHHHH--HhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDV--CGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~--~~~La~~L~~~GheV~Vit~~ 194 (662)
.+||++.. +||.+.| ..++.+.|.+.|++|.||.+.
T Consensus 5 ~k~Illgi--------TGsiaayk~~~~ll~~L~~~g~eV~vv~T~ 42 (207)
T 3mcu_A 5 GKRIGFGF--------TGSHCTYEEVMPHLEKLIAEGAEVRPVVSY 42 (207)
T ss_dssp TCEEEEEE--------CSCGGGGTTSHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEEE--------EChHHHHHHHHHHHHHHHhCCCEEEEEEeh
Confidence 36777665 4777777 789999999999999999765
No 112
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=41.68 E-value=25 Score=32.38 Aligned_cols=39 Identities=10% Similarity=0.131 Sum_probs=31.5
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHh-CCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~-~GheV~Vit~~ 194 (662)
+|||++|... + .|.....+..+++.|.+ .|++|.++-..
T Consensus 1 Mmkilii~~S--~---~g~t~~la~~i~~~l~~~~g~~v~~~~l~ 40 (198)
T 3b6i_A 1 MAKVLVLYYS--M---YGHIETMARAVAEGASKVDGAEVVVKRVP 40 (198)
T ss_dssp -CEEEEEECC--S---SSHHHHHHHHHHHHHHTSTTCEEEEEECC
T ss_pred CCeEEEEEeC--C---CcHHHHHHHHHHHHHhhcCCCEEEEEEcc
Confidence 3799998764 4 47788899999999998 89999998643
No 113
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=41.49 E-value=28 Score=32.59 Aligned_cols=40 Identities=20% Similarity=0.129 Sum_probs=32.5
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.+|||++|... | .|.....+..+++.|.+.|++|.++-..
T Consensus 5 ~mmkilii~~S--~---~g~T~~la~~i~~~l~~~g~~v~~~~l~ 44 (211)
T 1ydg_A 5 APVKLAIVFYS--S---TGTGYAMAQEAAEAGRAAGAEVRLLKVR 44 (211)
T ss_dssp CCCEEEEEECC--S---SSHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCeEEEEEEC--C---CChHHHHHHHHHHHHhcCCCEEEEEecc
Confidence 35899999753 5 4778889999999999999999998643
No 114
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=41.24 E-value=1.5e+02 Score=24.58 Aligned_cols=109 Identities=6% Similarity=-0.035 Sum_probs=62.8
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhhcCC-cEEEEcCCChHHHHHHHHh-------cCEEEEcCCC-CCCcHHHHHHHHc--
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEATYKD-KYRGWVGFNVPISHRITAG-------CDILLMPSRF-EPCGLNQLYAMRY-- 565 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~ll~~-------aDi~v~PS~~-E~fgl~~lEAma~-- 565 (662)
..+++|+.+.+ .....+..+-..... ..+.... +.+.....+.. .|++++-... +.-|+.+++.+..
T Consensus 9 ~~~iLivdd~~-~~~~~l~~~l~~~~~~~~v~~~~-~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~ 86 (146)
T 3ilh_A 9 IDSVLLIDDDD-IVNFLNTTIIRMTHRVEEIQSVT-SGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQHF 86 (146)
T ss_dssp EEEEEEECSCH-HHHHHHHHHHHTTCCEEEEEEES-SHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHHHC
T ss_pred cceEEEEeCCH-HHHHHHHHHHHhcCCCeeeeecC-CHHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHHHHHhh
Confidence 35677776663 333333333332222 1222222 33334345544 7888876654 5668888877665
Q ss_pred -----CCcEEEeCCcccc----cccccccccccCCCCc-cceEEECCCCHHHHHHHHHHHHH
Q 006091 566 -----GTIPVVHATGGLR----DTVENFNPFAREGSGE-GTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 566 -----G~PvVas~~gg~~----eii~~~~~~~~~~~~~-~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
.+|+|......-. +.+.. + ..+++..|.+.+++.++|.....
T Consensus 87 ~~~~~~~~ii~~t~~~~~~~~~~~~~~----------g~~~~~l~KP~~~~~L~~~i~~~~~ 138 (146)
T 3ilh_A 87 QPMKNKSIVCLLSSSLDPRDQAKAEAS----------DWVDYYVSKPLTANALNNLYNKVLN 138 (146)
T ss_dssp GGGTTTCEEEEECSSCCHHHHHHHHHC----------SSCCEEECSSCCHHHHHHHHHHHHC
T ss_pred hhccCCCeEEEEeCCCChHHHHHHHhc----------CCcceeeeCCCCHHHHHHHHHHHHH
Confidence 5677664322222 22222 4 67899999999999999987764
No 115
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=40.93 E-value=23 Score=34.16 Aligned_cols=40 Identities=18% Similarity=0.128 Sum_probs=29.8
Q ss_pred ceeEEEEeecccCccccCc-HHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGG-LGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG-~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.|||++|... |. .++ ....+..+++.|.+.||+|.++-..
T Consensus 1 ~mkiLiI~gs--pr--~~S~t~~l~~~~~~~l~~~g~ev~~~dL~ 41 (228)
T 3tem_A 1 GKKVLIVYAH--QE--PKSFNGSLKNVAVDELSRQGCTVTVSDLY 41 (228)
T ss_dssp CCEEEEEECC--SC--TTSHHHHHHHHHHHHHHHHTCEEEEEETT
T ss_pred CCEEEEEEeC--CC--CCCHHHHHHHHHHHHHHHCCCEEEEEEhh
Confidence 3899999975 43 244 4556677788888889999998644
No 116
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=40.44 E-value=20 Score=35.12 Aligned_cols=38 Identities=18% Similarity=0.183 Sum_probs=28.9
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCC
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 197 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~ 197 (662)
||||+.+.... .+.-+..|+++|.+.| +|+|++|...+
T Consensus 1 M~ILlTNDDGi-------~apGi~aL~~~l~~~g-~V~VVAP~~~~ 38 (244)
T 2e6c_A 1 MRILVTNDDGI-------YSPGLWALAEAASQFG-EVFVAAPDTEQ 38 (244)
T ss_dssp CEEEEECSSCT-------TCHHHHHHHHHHTTTS-EEEEEEECSSC
T ss_pred CeEEEEcCCCC-------CcHhHHHHHHHHHhCC-CEEEEecCCCC
Confidence 89998776532 2345788999999998 99999997543
No 117
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=40.09 E-value=22 Score=33.05 Aligned_cols=33 Identities=27% Similarity=0.397 Sum_probs=24.7
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||+++.. +|++| ..+++.|.++||+|.+++..
T Consensus 1 MkvlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGA-------TGRAG---SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEcC-------CchhH---HHHHHHHHhCCCEEEEEEcC
Confidence 78765542 46677 46788899999999998654
No 118
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=39.88 E-value=24 Score=32.64 Aligned_cols=38 Identities=16% Similarity=0.197 Sum_probs=31.3
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
+|||++|... .|.....+..+++.|.+.|++|.++...
T Consensus 4 mmkilii~~S------~g~T~~la~~i~~~l~~~g~~v~~~~l~ 41 (199)
T 2zki_A 4 KPNILVLFYG------YGSIVELAKEIGKGAEEAGAEVKIRRVR 41 (199)
T ss_dssp CCEEEEEECC------SSHHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CcEEEEEEeC------ccHHHHHHHHHHHHHHhCCCEEEEEehh
Confidence 5899998764 3778888999999999999999998643
No 119
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=39.70 E-value=48 Score=27.96 Aligned_cols=43 Identities=14% Similarity=0.178 Sum_probs=29.3
Q ss_pred CCceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCC
Q 006091 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 197 (662)
Q Consensus 149 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~ 197 (662)
.++|||++++.. ....+..+..+-++..++|.+|.+.+..++.
T Consensus 4 ~~~mkIlL~C~a------GmSTsllv~km~~~a~~~gi~v~i~a~~~~~ 46 (108)
T 3nbm_A 4 SKELKVLVLCAG------SGTSAQLANAINEGANLTEVRVIANSGAYGA 46 (108)
T ss_dssp -CCEEEEEEESS------SSHHHHHHHHHHHHHHHHTCSEEEEEEETTS
T ss_pred ccCceEEEECCC------CCCHHHHHHHHHHHHHHCCCceEEEEcchHH
Confidence 357999999962 1223445666667777789999998755443
No 120
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=39.66 E-value=31 Score=31.85 Aligned_cols=38 Identities=13% Similarity=0.170 Sum_probs=31.3
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
+|||++|... | .|.....+..+++.|.+.|++|.++..
T Consensus 5 M~kilii~~S--~---~g~T~~la~~i~~~l~~~g~~v~~~~l 42 (200)
T 2a5l_A 5 SPYILVLYYS--R---HGATAEMARQIARGVEQGGFEARVRTV 42 (200)
T ss_dssp CCEEEEEECC--S---SSHHHHHHHHHHHHHHHTTCEEEEEBC
T ss_pred cceEEEEEeC--C---CChHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 3699998764 5 477888999999999999999999854
No 121
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=39.58 E-value=1.6e+02 Score=24.37 Aligned_cols=109 Identities=12% Similarity=0.102 Sum_probs=64.2
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH--hcCEEEEcCCC-CCCcHHHHHHHHc-----CCc
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMRY-----GTI 568 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~--~aDi~v~PS~~-E~fgl~~lEAma~-----G~P 568 (662)
..+++|+.+.. .....+..+-......+. ... +.+.....+. ..|++++-... +.-|+.+++.+.. .+|
T Consensus 6 ~~~iLivdd~~-~~~~~l~~~l~~~g~~v~-~~~-~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ 82 (140)
T 3grc_A 6 RPRILICEDDP-DIARLLNLMLEKGGFDSD-MVH-SAAQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLA 82 (140)
T ss_dssp CSEEEEECSCH-HHHHHHHHHHHHTTCEEE-EEC-SHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCE
T ss_pred CCCEEEEcCCH-HHHHHHHHHHHHCCCeEE-EEC-CHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCC
Confidence 45677776654 333333333222222332 221 3333333443 46888876553 5668888888775 678
Q ss_pred EEEeCCcccc-----cccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHH
Q 006091 569 PVVHATGGLR-----DTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 618 (662)
Q Consensus 569 vVas~~gg~~-----eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~ 618 (662)
+|.-....-. +.+.. |..+++..|.+.+++..+|..+++.
T Consensus 83 ii~~s~~~~~~~~~~~~~~~----------g~~~~l~kP~~~~~l~~~i~~~l~~ 127 (140)
T 3grc_A 83 IVVVSANAREGELEFNSQPL----------AVSTWLEKPIDENLLILSLHRAIDN 127 (140)
T ss_dssp EEEECTTHHHHHHHHCCTTT----------CCCEEECSSCCHHHHHHHHHHHHHH
T ss_pred EEEEecCCChHHHHHHhhhc----------CCCEEEeCCCCHHHHHHHHHHHHHh
Confidence 8774332222 22222 6789999999999999999988874
No 122
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=39.50 E-value=23 Score=33.63 Aligned_cols=36 Identities=17% Similarity=0.066 Sum_probs=29.0
Q ss_pred ceeEEEEeecccCccccCcHHHH--HhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDV--CGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~--~~~La~~L~~~GheV~Vit~~ 194 (662)
.+||++-. +|+.+.+ ..++.+.|.+.|++|.|+.+.
T Consensus 7 ~k~I~lgi--------TGs~aa~~k~~~ll~~L~~~g~eV~vv~T~ 44 (201)
T 3lqk_A 7 GKHVGFGL--------TGSHCTYHEVLPQMERLVELGAKVTPFVTH 44 (201)
T ss_dssp TCEEEEEC--------CSCGGGGGGTHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEEE--------EChHHHHHHHHHHHHHHhhCCCEEEEEECh
Confidence 46777665 4666766 999999999999999999765
No 123
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=39.13 E-value=22 Score=34.90 Aligned_cols=38 Identities=18% Similarity=0.162 Sum_probs=28.8
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCC
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 197 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~ 197 (662)
||||+.+.... .+.-+..|+++|.+.| +|+|++|...+
T Consensus 1 M~ILlTNDDGi-------~apGi~aL~~~l~~~g-~V~VVAP~~~~ 38 (247)
T 1j9j_A 1 MRILVTNDDGI-------QSKGIIVLAELLSEEH-EVFVVAPDKER 38 (247)
T ss_dssp CEEEEECSSCT-------TCHHHHHHHHHHTTTS-EEEEEEESSCC
T ss_pred CeEEEEcCCCC-------CcHhHHHHHHHHHhCC-CEEEEecCCCC
Confidence 89998776532 2345788999999988 99999997544
No 124
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=38.87 E-value=26 Score=34.15 Aligned_cols=42 Identities=17% Similarity=0.339 Sum_probs=28.8
Q ss_pred cccCCceeEEEEeecccCccccCcHH--HHHhhHHHHHHhCCCcEEEEeec
Q 006091 146 AQTRVSYNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 146 ~~~~~~MkIl~vs~~~~P~~~~GG~~--~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.+..++|||+.|+.. .||+| +.+.+||.+|+ +|+.|.+|-..
T Consensus 21 ~~~~~~~~vI~v~s~------kGGvGKTT~a~~LA~~la-~g~~VlliD~D 64 (267)
T 3k9g_A 21 SMDNKKPKIITIASI------KGGVGKSTSAIILATLLS-KNNKVLLIDMD 64 (267)
T ss_dssp -----CCEEEEECCS------SSSSCHHHHHHHHHHHHT-TTSCEEEEEEC
T ss_pred cCCCCCCeEEEEEeC------CCCchHHHHHHHHHHHHH-CCCCEEEEECC
Confidence 344566787777652 45554 67889999999 99999999655
No 125
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=38.72 E-value=28 Score=36.36 Aligned_cols=36 Identities=19% Similarity=0.269 Sum_probs=29.3
Q ss_pred ceeEEEEeecccCccccCcHHH--HHhhHHHHHHhCCCcEEEEee
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~--~~~~La~~L~~~GheV~Vit~ 193 (662)
+|+|++++. .||+|+ .+.++|.+|+++|+.|.+|..
T Consensus 1 M~~i~~~~g-------kGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 1 MALILTFLG-------KSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp -CEEEEEEC-------SBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CcEEEEEeC-------CCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 378888875 477776 568899999999999999976
No 126
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=38.67 E-value=24 Score=32.99 Aligned_cols=33 Identities=30% Similarity=0.474 Sum_probs=24.4
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||++... +|++| ..+++.|.++||+|.+++-.
T Consensus 1 MkilVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLGA-------TGRAG---SAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcC-------CCHHH---HHHHHHHHHCCCEEEEEEec
Confidence 78665532 46666 56788999999999998643
No 127
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=38.52 E-value=20 Score=30.73 Aligned_cols=39 Identities=5% Similarity=0.037 Sum_probs=29.3
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCC--CcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG--HRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~G--heV~Vit~~ 194 (662)
||+++|.....|. -...++..+|....++| |+|.|+--.
T Consensus 8 ~K~~ivi~s~d~~----~~~~~al~~A~~a~~~G~~~eV~i~~~G 48 (117)
T 2fb6_A 8 DKLTILWTTDNKD----TVFNMLAMYALNSKNRGWWKHINIILWG 48 (117)
T ss_dssp SEEEEEECCCCHH----HHHHTHHHHHHHHHHHTSCSEEEEEECS
T ss_pred CeEEEEEEcCChH----HHHHHHHHHHHHHHHcCCCCcEEEEEEC
Confidence 9999998764331 12256889999999999 899999643
No 128
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=38.30 E-value=29 Score=32.71 Aligned_cols=25 Identities=12% Similarity=0.097 Sum_probs=21.2
Q ss_pred HHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 170 LGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 170 ~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.|..-..+++.|.+.||+|+++...
T Consensus 8 ~G~~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 8 GETTAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCHHHHHHHHHHHhCCCeEEEEECC
Confidence 3677788999999999999999744
No 129
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=38.17 E-value=29 Score=35.70 Aligned_cols=40 Identities=25% Similarity=0.355 Sum_probs=28.7
Q ss_pred CceeEEEEeecccCccccCcHH--HHHhhHHHHHHhCCCcEEEEeecC
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVSPRY 195 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~--~~~~~La~~L~~~GheV~Vit~~~ 195 (662)
.+||+++|+.. .||+| +.+.+||..|+++|++|.+|....
T Consensus 23 ~~~~~i~v~sg------KGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 64 (349)
T 3ug7_A 23 KDGTKYIMFGG------KGGVGKTTMSAATGVYLAEKGLKVVIVSTDP 64 (349)
T ss_dssp SCSCEEEEEEC------SSSTTHHHHHHHHHHHHHHSSCCEEEEECCT
T ss_pred cCCCEEEEEeC------CCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 34554444432 35555 578889999999999999998663
No 130
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=37.94 E-value=25 Score=35.77 Aligned_cols=37 Identities=24% Similarity=0.453 Sum_probs=28.8
Q ss_pred ceeEEEEeecccCccccCcHHH--HHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~--~~~~La~~L~~~GheV~Vit~~ 194 (662)
.-||.-|+. .||+|+ .+-+||.+|+++|++|.+|-..
T Consensus 47 ~aKVIAIaG-------KGGVGKTTtavNLA~aLA~~GkkVllID~D 85 (314)
T 3fwy_A 47 GAKVFAVYG-------KGGIGKSTTSSNLSAAFSILGKRVLQIGCD 85 (314)
T ss_dssp CCEEEEEEC-------STTSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred CceEEEEEC-------CCccCHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 346666653 488776 6789999999999999999655
No 131
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=37.73 E-value=1.3e+02 Score=25.18 Aligned_cols=108 Identities=12% Similarity=0.118 Sum_probs=63.1
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhh-cCCcEEEEcCCChHHHHHHHHh---cCEEEEcCCCC--CCcHHHHHHHHc-----
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEAT-YKDKYRGWVGFNVPISHRITAG---CDILLMPSRFE--PCGLNQLYAMRY----- 565 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~ll~~---aDi~v~PS~~E--~fgl~~lEAma~----- 565 (662)
..+++|+.+.+ .....+..+-.. ....+.... +.......+.. .|++++-.... .-|+.+++.+..
T Consensus 4 ~~~ilivdd~~-~~~~~l~~~L~~~~~~~v~~~~--~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ 80 (140)
T 3lua_A 4 DGTVLLIDYFE-YEREKTKIIFDNIGEYDFIEVE--NLKKFYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIRNNSRTA 80 (140)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHHHCCCEEEEEC--SHHHHHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHHHSGGGT
T ss_pred CCeEEEEeCCH-HHHHHHHHHHHhccCccEEEEC--CHHHHHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHHhCcccC
Confidence 35677777664 333333333333 333443222 33333344433 68888765543 346777776665
Q ss_pred CCcEEEe-CCccc---ccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 566 GTIPVVH-ATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 566 G~PvVas-~~gg~---~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
.+|+|.- ..... .+.+.. |..+++..|.+.+++.++|..++.
T Consensus 81 ~~~ii~ls~~~~~~~~~~~~~~----------g~~~~l~KP~~~~~l~~~i~~~~~ 126 (140)
T 3lua_A 81 NTPVIIATKSDNPGYRHAALKF----------KVSDYILKPYPTKRLENSVRSVLK 126 (140)
T ss_dssp TCCEEEEESCCCHHHHHHHHHS----------CCSEEEESSCCTTHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHc----------CCCEEEECCCCHHHHHHHHHHHHH
Confidence 7788874 33222 222333 678999999999999999998875
No 132
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=37.21 E-value=1.8e+02 Score=24.18 Aligned_cols=111 Identities=9% Similarity=0.036 Sum_probs=63.6
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH--hcCEEEEcCCC-CCCcHHHHHHHHc---CCcEE
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMRY---GTIPV 570 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~--~aDi~v~PS~~-E~fgl~~lEAma~---G~PvV 570 (662)
..+++++.+.+.....+...+........+.... +.......+. ..|++++-... +.-|+.+++.+.. ..|+|
T Consensus 9 ~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~-~~~~al~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii 87 (143)
T 2qv0_A 9 KMKVIIVEDEFLAQQELSWLINTHSQMEIVGSFD-DGLDVLKFLQHNKVDAIFLDINIPSLDGVLLAQNISQFAHKPFIV 87 (143)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHHSCCEEEEEES-CHHHHHHHHHHCCCSEEEECSSCSSSCHHHHHHHHTTSTTCCEEE
T ss_pred ceEEEEEcCCHHHHHHHHHHHHhCCCceEEEEeC-CHHHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHccCCCceEE
Confidence 5678888776433333333343332333332332 3333333443 46888876544 4567788877764 34454
Q ss_pred E-eCCc-ccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHH
Q 006091 571 V-HATG-GLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 618 (662)
Q Consensus 571 a-s~~g-g~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~ 618 (662)
. +... ...+.+.. |..+++..|.+.+++..+|..++..
T Consensus 88 ~~s~~~~~~~~~~~~----------g~~~~l~KP~~~~~l~~~i~~~~~~ 127 (143)
T 2qv0_A 88 FITAWKEHAVEAFEL----------EAFDYILKPYQESRIINMLQKLTTA 127 (143)
T ss_dssp EEESCCTTHHHHHHT----------TCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHhC----------CcceEEeCCCCHHHHHHHHHHHHHH
Confidence 4 3332 12222333 6789999999999999999988764
No 133
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=37.10 E-value=82 Score=29.87 Aligned_cols=35 Identities=14% Similarity=0.110 Sum_probs=24.4
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhC--CCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR--GHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~--GheV~Vit~~ 194 (662)
+|||+++.. |.+.....+.++|.+. +|+|..|.++
T Consensus 3 m~ki~vl~s---------G~g~~~~~~l~~l~~~~l~~~I~~Vit~ 39 (212)
T 3av3_A 3 MKRLAVFAS---------GSGTNFQAIVDAAKRGDLPARVALLVCD 39 (212)
T ss_dssp CEEEEEECC---------SSCHHHHHHHHHHHTTCCCEEEEEEEES
T ss_pred CcEEEEEEE---------CCcHHHHHHHHHHHhCCCCCeEEEEEeC
Confidence 478888753 3345677788888877 6888766655
No 134
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=37.04 E-value=38 Score=33.77 Aligned_cols=41 Identities=10% Similarity=0.079 Sum_probs=30.4
Q ss_pred CCceeEEEEeecccCccccCcHH-HHHhhHHHHHHhCCCcEEEEee
Q 006091 149 RVSYNIVFVTAEAAPYSKTGGLG-DVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 149 ~~~MkIl~vs~~~~P~~~~GG~~-~~~~~La~~L~~~GheV~Vit~ 193 (662)
..+|||++|+.. |. .+|.. ..+..+++.+.+.|++|.++-.
T Consensus 56 ~~~mKILiI~GS--~R--~~S~T~~La~~~~~~l~~~G~eveiidL 97 (279)
T 2fzv_A 56 APPVRILLLYGS--LR--ARSFSRLAVEEAARLLQFFGAETRIFDP 97 (279)
T ss_dssp CSCCEEEEEESC--CS--SSCHHHHHHHHHHHHHHHTTCEEEEBCC
T ss_pred CCCCEEEEEEeC--CC--CCCHHHHHHHHHHHHHhhCCCEEEEEeh
Confidence 457999999975 43 35544 5666688888889999999854
No 135
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=36.61 E-value=1.8e+02 Score=24.02 Aligned_cols=110 Identities=8% Similarity=-0.013 Sum_probs=64.9
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH--hcCEEEEcCCC-CCCcHHHHHHHHc-----CCc
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMRY-----GTI 568 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~--~aDi~v~PS~~-E~fgl~~lEAma~-----G~P 568 (662)
..+++++.+.+.....+...+........+.... +.+.....+. ..|++++-... +.-|+.+++.+.. .+|
T Consensus 8 ~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~-~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ 86 (143)
T 3cnb_A 8 DFSILIIEDDKEFADMLTQFLENLFPYAKIKIAY-NPFDAGDLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATANII 86 (143)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHHCTTCEEEEEC-SHHHHHHHHHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSE
T ss_pred CceEEEEECCHHHHHHHHHHHHhccCccEEEEEC-CHHHHHHHHHhcCCCEEEEecccCCCcHHHHHHHHHhCccccCCc
Confidence 5677888776433333333333313334232332 3333334443 46888876654 4567888887765 567
Q ss_pred EEE-eCCcccc---cccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 569 PVV-HATGGLR---DTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 569 vVa-s~~gg~~---eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
+|+ +...... +.+.. |..+++..|.+.+++.++|..++.
T Consensus 87 ii~~s~~~~~~~~~~~~~~----------g~~~~l~kP~~~~~l~~~i~~~~~ 129 (143)
T 3cnb_A 87 VIAMTGALTDDNVSRIVAL----------GAETCFGKPLNFTLLEKTIKQLVE 129 (143)
T ss_dssp EEEEESSCCHHHHHHHHHT----------TCSEEEESSCCHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHhc----------CCcEEEeCCCCHHHHHHHHHHHHH
Confidence 776 4433222 22333 678999999999999999998876
No 136
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=36.41 E-value=24 Score=35.25 Aligned_cols=38 Identities=18% Similarity=0.100 Sum_probs=28.9
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCC
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 197 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~ 197 (662)
||||+.+.... .+.-+..|+++|.+.| +|+|++|...+
T Consensus 1 M~ILlTNDDGi-------~ApGi~aL~~aL~~~g-~V~VVAP~~~q 38 (280)
T 1l5x_A 1 MKILVTNDDGV-------HSPGLRLLYQFALSLG-DVDVVAPESPK 38 (280)
T ss_dssp CEEEEECSSCT-------TCHHHHHHHHHHGGGS-EEEEEEESSCT
T ss_pred CeEEEEcCCCC-------CcHhHHHHHHHHHhCC-CEEEEecCCCC
Confidence 89998776532 2344788999999998 99999997544
No 137
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=36.06 E-value=35 Score=31.37 Aligned_cols=39 Identities=10% Similarity=0.119 Sum_probs=31.8
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHh-CCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~-~GheV~Vit~~ 194 (662)
+|||++|... + .|.....+..+++.|.+ .|++|.++...
T Consensus 4 M~kiliiy~S--~---~GnT~~~a~~i~~~l~~~~g~~v~~~~l~ 43 (188)
T 2ark_A 4 MGKVLVIYDT--R---TGNTKKMAELVAEGARSLEGTEVRLKHVD 43 (188)
T ss_dssp CEEEEEEECC--S---SSHHHHHHHHHHHHHHTSTTEEEEEEETT
T ss_pred CCEEEEEEEC--C---CcHHHHHHHHHHHHHhhcCCCeEEEEEhh
Confidence 4799988753 4 58888899999999999 99999988543
No 138
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=36.02 E-value=34 Score=29.14 Aligned_cols=33 Identities=21% Similarity=0.482 Sum_probs=23.6
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.|||+++.. |.++ ..+++.|.+.||+|.++...
T Consensus 4 ~m~i~IiG~--------G~iG---~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGI--------GRVG---YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC--------CHHH---HHHHHHHHhCCCeEEEEECC
Confidence 488887742 3344 56788999999999998643
No 139
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=35.96 E-value=1.8e+02 Score=23.81 Aligned_cols=110 Identities=6% Similarity=-0.046 Sum_probs=63.3
Q ss_pred eEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH---------hcCEEEEcCCC-CCCcHHHHHHHH---
Q 006091 498 IQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA---------GCDILLMPSRF-EPCGLNQLYAMR--- 564 (662)
Q Consensus 498 ~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~---------~aDi~v~PS~~-E~fgl~~lEAma--- 564 (662)
.+++++.+.+.....+...+........+.... +.......+. ..|++++-... +.-|+.+++.+.
T Consensus 3 ~~ilivdd~~~~~~~l~~~L~~~~~~~~v~~~~-~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~ 81 (140)
T 1k68_A 3 KKIFLVEDNKADIRLIQEALANSTVPHEVVTVR-DGMEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVLAEIKSDP 81 (140)
T ss_dssp CEEEEECCCHHHHHHHHHHHHTCSSCCEEEEEC-SHHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHHHHHHST
T ss_pred CeEEEEeCCHHHHHHHHHHHHhcCCCceEEEEC-CHHHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHHHHHHcCc
Confidence 467777766433333333333221111222222 3333334544 47888876554 456778877776
Q ss_pred --cCCcEEE-eCCccc---ccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHH
Q 006091 565 --YGTIPVV-HATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 618 (662)
Q Consensus 565 --~G~PvVa-s~~gg~---~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~ 618 (662)
..+|+|. +..... .+.+.. |..+++..|.+.+++..+|..++..
T Consensus 82 ~~~~~pii~ls~~~~~~~~~~~~~~----------g~~~~l~kP~~~~~l~~~i~~~~~~ 131 (140)
T 1k68_A 82 TLKRIPVVVLSTSINEDDIFHSYDL----------HVNCYITKSANLSQLFQIVKGIEEF 131 (140)
T ss_dssp TGGGSCEEEEESCCCHHHHHHHHHT----------TCSEEEECCSSHHHHHHHHHHHHHH
T ss_pred ccccccEEEEecCCcHHHHHHHHHh----------chhheecCCCCHHHHHHHHHHHHHH
Confidence 3577776 333322 222333 6789999999999999999888763
No 140
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=35.88 E-value=27 Score=34.39 Aligned_cols=39 Identities=23% Similarity=0.215 Sum_probs=29.1
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCC
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 197 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~ 197 (662)
.||||+.+.... .+.-+..|+++|++.| +|+|++|...+
T Consensus 1 ~M~ILlTNDDGi-------~apGi~aL~~~L~~~g-~V~VVAP~~~~ 39 (254)
T 2v4n_A 1 SMRILLSNDDGV-------HAPGIQTLAKALREFA-DVQVVAPDRNR 39 (254)
T ss_dssp CCEEEEECSSCT-------TCHHHHHHHHHHTTTS-EEEEEEESSCC
T ss_pred CCeEEEEcCCCC-------CCHHHHHHHHHHHhCC-cEEEEeeCCCC
Confidence 489998876532 2345788899998886 99999997544
No 141
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=35.80 E-value=2e+02 Score=24.30 Aligned_cols=108 Identities=8% Similarity=0.105 Sum_probs=61.8
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHh---cCEEEEcCCC-CCCcHHHHHHHHc---CCcE
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAG---CDILLMPSRF-EPCGLNQLYAMRY---GTIP 569 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~---aDi~v~PS~~-E~fgl~~lEAma~---G~Pv 569 (662)
..+++|+.+.+ .....+..+-.. ...+.... +.......+.. .|++++-... +.-|+.+++.+.. .+|+
T Consensus 4 ~~~ILivdd~~-~~~~~l~~~L~~-~~~v~~~~--~~~~a~~~l~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~i 79 (151)
T 3kcn_A 4 NERILLVDDDY-SLLNTLKRNLSF-DFEVTTCE--SGPEALACIKKSDPFSVIMVDMRMPGMEGTEVIQKARLISPNSVY 79 (151)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHTT-TSEEEEES--SHHHHHHHHHHSCCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEE
T ss_pred CCeEEEEeCCH-HHHHHHHHHhcc-CceEEEeC--CHHHHHHHHHcCCCCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEE
Confidence 35677777764 333333332222 22333222 33333344442 3888876543 4567777776653 6677
Q ss_pred EE-eCCccc---ccccccccccccCCCCc-cceEEECCCCHHHHHHHHHHHHHH
Q 006091 570 VV-HATGGL---RDTVENFNPFAREGSGE-GTGWSFLPLSEESMLTALRFAIRT 618 (662)
Q Consensus 570 Va-s~~gg~---~eii~~~~~~~~~~~~~-~~G~l~~~~d~~~la~aI~~~l~~ 618 (662)
|. +..... .+.+.. | ..+++..|.+.+++.++|..++..
T Consensus 80 i~~s~~~~~~~~~~~~~~----------g~~~~~l~KP~~~~~L~~~i~~~l~~ 123 (151)
T 3kcn_A 80 LMLTGNQDLTTAMEAVNE----------GQVFRFLNKPCQMSDIKAAINAGIKQ 123 (151)
T ss_dssp EEEECGGGHHHHHHHHHH----------TCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHc----------CCeeEEEcCCCCHHHHHHHHHHHHHH
Confidence 66 333322 233333 5 578999999999999999998873
No 142
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=35.45 E-value=35 Score=31.65 Aligned_cols=40 Identities=15% Similarity=0.210 Sum_probs=30.0
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHH-HHhCCCcEEEEee
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVA-LAARGHRVMVVSP 193 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~-L~~~GheV~Vit~ 193 (662)
+|||++|+.. |. +.|-....+..+++. |.+.|++|.++-.
T Consensus 2 Mmkilii~gS--~r-~~g~t~~la~~i~~~~l~~~g~~v~~~dl 42 (197)
T 2vzf_A 2 TYSIVAISGS--PS-RNSTTAKLAEYALAHVLARSDSQGRHIHV 42 (197)
T ss_dssp CEEEEEEECC--SS-TTCHHHHHHHHHHHHHHHHSSEEEEEEEG
T ss_pred CceEEEEECC--CC-CCChHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 4799999864 42 135566777778888 8999999999864
No 143
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=35.44 E-value=2e+02 Score=24.25 Aligned_cols=110 Identities=13% Similarity=0.068 Sum_probs=62.3
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHH--HhcCEEEEcCCC-CCCcHHHHHHHHc---CCcEE
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT--AGCDILLMPSRF-EPCGLNQLYAMRY---GTIPV 570 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll--~~aDi~v~PS~~-E~fgl~~lEAma~---G~PvV 570 (662)
..+++|+.+.+.....+...+........+.... +.....+.+ ...|++++-... +.-|+.+++.+.. .+|+|
T Consensus 15 ~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~-~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii 93 (152)
T 3eul_A 15 KVRVVVGDDHPLFREGVVRALSLSGSVNVVGEAD-DGAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVL 93 (152)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHSSEEEEEEES-SHHHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEE
T ss_pred eEEEEEEcCCHHHHHHHHHHHhhCCCeEEEEEeC-CHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEE
Confidence 4567777665422233333333332222232232 332232333 356887776543 4567777776654 56676
Q ss_pred E-eCCccc---ccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 571 V-HATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 571 a-s~~gg~---~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
. +..... .+.+.. |..+++..|.+.+++.++|..++.
T Consensus 94 ~~s~~~~~~~~~~~~~~----------g~~~~l~Kp~~~~~l~~~i~~~~~ 134 (152)
T 3eul_A 94 LISAHDEPAIVYQALQQ----------GAAGFLLKDSTRTEIVKAVLDCAK 134 (152)
T ss_dssp EEESCCCHHHHHHHHHT----------TCSEEEETTCCHHHHHHHHHHHHH
T ss_pred EEEccCCHHHHHHHHHc----------CCCEEEecCCCHHHHHHHHHHHHc
Confidence 6 333322 223333 778999999999999999998886
No 144
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=35.36 E-value=22 Score=36.43 Aligned_cols=38 Identities=32% Similarity=0.492 Sum_probs=30.2
Q ss_pred CceeEEEEeecccCccccCcHH--HHHhhHHHHHHhCCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~--~~~~~La~~L~~~GheV~Vit~~ 194 (662)
..|+|++++. .||+| +.+.+||.+|++.|++|.+|...
T Consensus 14 ~~~~i~~~sg-------kGGvGKTt~a~~lA~~la~~g~~vllid~D 53 (334)
T 3iqw_A 14 RSLRWIFVGG-------KGGVGKTTTSCSLAIQLAKVRRSVLLLSTD 53 (334)
T ss_dssp TTCCEEEEEC-------STTSSHHHHHHHHHHHHTTSSSCEEEEECC
T ss_pred CCeEEEEEeC-------CCCccHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 4578888875 35555 57889999999999999999865
No 145
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=34.69 E-value=2e+02 Score=24.31 Aligned_cols=109 Identities=11% Similarity=0.116 Sum_probs=61.8
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhh-cCCcEEEEcCCChHHHHHHHH--hcCEEEEcCCC-CCCcHHHHHHHHc---CCcE
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEAT-YKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMRY---GTIP 569 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~ll~--~aDi~v~PS~~-E~fgl~~lEAma~---G~Pv 569 (662)
..+++++.+.+ .....+..+-.. ....+..... +.......+. ..|++++-... +.-|+.+++.+.. .+|+
T Consensus 5 ~~~ILivdd~~-~~~~~l~~~L~~~~~~~v~~~~~-~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~i 82 (153)
T 3cz5_A 5 TARIMLVDDHP-IVREGYRRLIERRPGYAVVAEAA-DAGEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARI 82 (153)
T ss_dssp CEEEEEECSCH-HHHHHHHHHHTTSTTEEEEEEES-SHHHHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCE
T ss_pred ccEEEEECCcH-HHHHHHHHHHhhCCCcEEEEEeC-CHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeE
Confidence 45677777664 333333333222 2222222222 3333334443 46888876543 4457777776654 6777
Q ss_pred EE-eCCccc---ccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 570 VV-HATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 570 Va-s~~gg~---~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
|+ +..... .+.+.. |..+++..|.+.+++.++|..++.
T Consensus 83 i~ls~~~~~~~~~~~~~~----------g~~~~l~kp~~~~~L~~~i~~~~~ 124 (153)
T 3cz5_A 83 LIFTMHQGSAFALKAFEA----------GASGYVTKSSDPAELVQAIEAILA 124 (153)
T ss_dssp EEEESCCSHHHHHHHHHT----------TCSEEEETTSCTTHHHHHHHHHTT
T ss_pred EEEECCCCHHHHHHHHHC----------CCcEEEecCCCHHHHHHHHHHHHh
Confidence 77 333322 222333 678999999999999999988875
No 146
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=34.65 E-value=47 Score=32.74 Aligned_cols=42 Identities=26% Similarity=0.454 Sum_probs=32.1
Q ss_pred CCceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 149 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.++|||+.|+.. .| .-|-.+.+.+||..|++.|..|.+|-..
T Consensus 79 ~~~~kvI~vts~-kg---G~GKTt~a~nLA~~lA~~G~rVLLID~D 120 (271)
T 3bfv_A 79 DSAVQSIVITSE-AP---GAGKSTIAANLAVAYAQAGYKTLIVDGD 120 (271)
T ss_dssp TCCCCEEEEECS-ST---TSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCeEEEEECC-CC---CCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 356888888763 12 2456678899999999999999999654
No 147
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=34.57 E-value=28 Score=32.97 Aligned_cols=35 Identities=20% Similarity=0.322 Sum_probs=25.3
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
..|+|++... +||+| ..+++.|.++||+|.+++-.
T Consensus 20 ~~~~ilVtGa-------tG~iG---~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 20 QGMRVLVVGA-------NGKVA---RYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp -CCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCCeEEEECC-------CChHH---HHHHHHHHhCCCeEEEEECC
Confidence 4577765542 47777 45788899999999998744
No 148
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=34.42 E-value=41 Score=33.26 Aligned_cols=40 Identities=15% Similarity=0.099 Sum_probs=28.6
Q ss_pred ceeEEEEeecccCccccCcH-HHHHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGL-GDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~-~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
+|||++|... |. .+|. ...+..+++.|.+.||+|.++-..
T Consensus 2 MmkiLiI~gS--pr--~~s~t~~la~~~~~~l~~~g~eV~~~dL~ 42 (273)
T 1d4a_A 2 GRRALIVLAH--SE--RTSFNYAMKEAAAAALKKKGWEVVESDLY 42 (273)
T ss_dssp CCEEEEEECC--SC--TTSHHHHHHHHHHHHHHHTTCEEEEEETT
T ss_pred CCEEEEEEeC--CC--CccHHHHHHHHHHHHHHhCCCeEEEEEcc
Confidence 4899999875 53 2443 445666777788899999998643
No 149
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=33.97 E-value=29 Score=35.59 Aligned_cols=25 Identities=32% Similarity=0.325 Sum_probs=19.5
Q ss_pred cCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 167 TGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 167 ~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
+|++| ..+++.|.++||+|.+++..
T Consensus 33 tG~iG---~~l~~~L~~~g~~V~~~~r~ 57 (375)
T 1t2a_A 33 TGQDG---SYLAEFLLEKGYEVHGIVRR 57 (375)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred CchHH---HHHHHHHHHCCCEEEEEECC
Confidence 46666 56788899999999998754
No 150
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=33.50 E-value=22 Score=33.30 Aligned_cols=38 Identities=16% Similarity=0.105 Sum_probs=28.5
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
+|||++|... |.. ++ +.....+++++.+.|++|.++-.
T Consensus 1 MmkiLiI~gs--p~~--~~-s~l~~~l~~~~~~~g~ev~~~dL 38 (192)
T 3f2v_A 1 MPKTLIILAH--PNI--SQ-STVHKHWSDAVRQHTDRFTVHEL 38 (192)
T ss_dssp -CCEEEEECC--TTG--GG-CSHHHHHHHHHTTCTTTEEEEEH
T ss_pred CCEEEEEEeC--CCc--cH-HHHHHHHHHHHHhCCCeEEEEEc
Confidence 4899999875 542 22 36778888888889999999864
No 151
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=33.21 E-value=2.1e+02 Score=23.69 Aligned_cols=109 Identities=8% Similarity=-0.031 Sum_probs=63.4
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH--hcCEEEEcCCC-CCCcHHHHHHHHc-----CCc
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMRY-----GTI 568 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~--~aDi~v~PS~~-E~fgl~~lEAma~-----G~P 568 (662)
..+++++.+.+.....+...+.. ....+. .. .+.+.....+. ..|++++-... +.-|+.+++.+.. .+|
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~-~g~~v~-~~-~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~p 83 (142)
T 3cg4_A 7 KGDVMIVDDDAHVRIAVKTILSD-AGFHII-SA-DSGGQCIDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGIA 83 (142)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHH-TTCEEE-EE-SSHHHHHHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHH-CCeEEE-Ee-CCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCC
Confidence 56777887764333333333332 223333 22 13333334444 35777765543 4567888888765 466
Q ss_pred EEE-eCCccc---ccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHH
Q 006091 569 PVV-HATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 618 (662)
Q Consensus 569 vVa-s~~gg~---~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~ 618 (662)
+|+ +..... .+.+.. |..+++..|.+.+++.++|..++..
T Consensus 84 ii~~s~~~~~~~~~~~~~~----------g~~~~l~kp~~~~~l~~~i~~~~~~ 127 (142)
T 3cg4_A 84 IVMLTAKNAPDAKMIGLQE----------YVVDYITKPFDNEDLIEKTTFFMGF 127 (142)
T ss_dssp EEEEECTTCCCCSSTTGGG----------GEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHhc----------CccEEEeCCCCHHHHHHHHHHHHHH
Confidence 766 333222 222333 6789999999999999999988763
No 152
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=33.14 E-value=3.1e+02 Score=25.68 Aligned_cols=112 Identities=13% Similarity=0.150 Sum_probs=62.6
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH--hcCEEEEcCCC-CCCcHHHHHHHHc---CCcEE
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMRY---GTIPV 570 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~--~aDi~v~PS~~-E~fgl~~lEAma~---G~PvV 570 (662)
..+++|+.+.+ .....+..+-......+. .. .+.+.....+. ..|++++--.. +.-|+.+++.+.. .+|+|
T Consensus 23 ~~~ILivdd~~-~~~~~l~~~L~~~g~~v~-~~-~~~~~al~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii 99 (250)
T 3r0j_A 23 EARVLVVDDEA-NIVELLSVSLKFQGFEVY-TA-TNGAQALDRARETRPDAVILDVXMPGMDGFGVLRRLRADGIDAPAL 99 (250)
T ss_dssp SCEEEEECSCH-HHHHHHHHHHHHTTCEEE-EE-SSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEE
T ss_pred CceEEEEECCH-HHHHHHHHHHHHCCCEEE-EE-CCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEE
Confidence 45677776653 222223322222222332 22 13333333332 46887765543 4567788777754 57777
Q ss_pred E-eCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHH
Q 006091 571 V-HATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 618 (662)
Q Consensus 571 a-s~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~ 618 (662)
. |........+.-+. .|..+++..|.+.+++..+|..++..
T Consensus 100 ~lt~~~~~~~~~~~~~-------~Ga~~yl~Kp~~~~~L~~~i~~~~~~ 141 (250)
T 3r0j_A 100 FLTARDSLQDKIAGLT-------LGGDDYVTKPFSLEEVVARLRVILRR 141 (250)
T ss_dssp EEECSTTHHHHHHHHT-------STTCEEEESSCCHHHHHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHH-------cCCcEEEeCCCCHHHHHHHHHHHHHh
Confidence 6 44333222222111 17789999999999999999998863
No 153
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=32.97 E-value=16 Score=39.48 Aligned_cols=66 Identities=20% Similarity=0.267 Sum_probs=40.4
Q ss_pred HHhcCEEEEcCCC-CCCcHHHHHHHHcCCcEEEeC--CcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHH
Q 006091 540 TAGCDILLMPSRF-EPCGLNQLYAMRYGTIPVVHA--TGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAI 616 (662)
Q Consensus 540 l~~aDi~v~PS~~-E~fgl~~lEAma~G~PvVas~--~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l 616 (662)
+..+|+++..... |.-=++.+-|-.+|++-+.+. .....++++. .+-...++| ....+..|.+.+
T Consensus 298 i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa~vn~~~~~~l~~~----------~gid~visp--~~~~a~~I~~~i 365 (461)
T 4g65_A 298 IDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMVLIQRGAYVDLVQG----------GVIDVAISP--QQATISALLTHV 365 (461)
T ss_dssp GGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHCS----------SSSCEEECH--HHHHHHHHHHHH
T ss_pred chhhcEEEEcccCcHHHHHHHHHHHHcCCccccccccccchhhhhhc----------cccceeeCH--HHHHHHHHHHHh
Confidence 4688999988765 433345567888998887764 3455566655 344455543 334455555554
Q ss_pred H
Q 006091 617 R 617 (662)
Q Consensus 617 ~ 617 (662)
.
T Consensus 366 ~ 366 (461)
T 4g65_A 366 R 366 (461)
T ss_dssp H
T ss_pred h
Confidence 3
No 154
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=32.88 E-value=33 Score=32.70 Aligned_cols=34 Identities=26% Similarity=0.508 Sum_probs=23.9
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
||.++|+.- +||+| ..+++.|.++|++|.++...
T Consensus 1 Mk~vlVtGa------sg~iG---~~l~~~L~~~g~~V~~~~r~ 34 (255)
T 2dkn_A 1 MSVIAITGS------ASGIG---AALKELLARAGHTVIGIDRG 34 (255)
T ss_dssp -CEEEEETT------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEeCC------CcHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 666667631 46676 55788899999999888643
No 155
>3cwq_A Para family chromosome partitioning protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: ADP; 2.47A {Synechocystis SP}
Probab=32.50 E-value=31 Score=32.36 Aligned_cols=35 Identities=20% Similarity=0.322 Sum_probs=26.0
Q ss_pred eeEEEEeecccCccccCcH--HHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGL--GDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~--~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|.|++++. .||+ .+.+.+||.+|+++| +|.+|-..
T Consensus 1 kvI~v~s~-------KGGvGKTT~a~~LA~~la~~g-~VlliD~D 37 (209)
T 3cwq_A 1 MIITVASF-------KGGVGKTTTAVHLSAYLALQG-ETLLIDGD 37 (209)
T ss_dssp CEEEEEES-------STTSSHHHHHHHHHHHHHTTS-CEEEEEEC
T ss_pred CEEEEEcC-------CCCCcHHHHHHHHHHHHHhcC-CEEEEECC
Confidence 45666653 3555 468899999999999 99998654
No 156
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=32.33 E-value=2.1e+02 Score=23.51 Aligned_cols=108 Identities=10% Similarity=0.048 Sum_probs=63.3
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH--hcCEEEEcCCC-CCCcHHHHHHHHc---CCcEE
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMRY---GTIPV 570 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~--~aDi~v~PS~~-E~fgl~~lEAma~---G~PvV 570 (662)
..+++|+.+.......+...+.. ....+.... +.+.....+. ..|++++-... +.-|+.+++.+.. .+|+|
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~-~~~~v~~~~--~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii 83 (137)
T 3hdg_A 7 ALKILIVEDDTDAREWLSTIISN-HFPEVWSAG--DGEEGERLFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVI 83 (137)
T ss_dssp CCCEEEECSCHHHHHHHHHHHHT-TCSCEEEES--SHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEE
T ss_pred ccEEEEEeCCHHHHHHHHHHHHh-cCcEEEEEC--CHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEE
Confidence 46778887764322333333333 222232222 3333333333 56888876653 4567777776664 57777
Q ss_pred EeC-Ccc---cccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 571 VHA-TGG---LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 571 as~-~gg---~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
+.. ... ..+.+.. |..+++..|.+.+++.++|..+++
T Consensus 84 ~~s~~~~~~~~~~~~~~----------g~~~~l~kP~~~~~l~~~i~~~~~ 124 (137)
T 3hdg_A 84 VISAFSEMKYFIKAIEL----------GVHLFLPKPIEPGRLMETLEDFRH 124 (137)
T ss_dssp ECCCCCCHHHHHHHHHH----------CCSEECCSSCCHHHHHHHHHHHHH
T ss_pred EEecCcChHHHHHHHhC----------CcceeEcCCCCHHHHHHHHHHHHH
Confidence 743 222 1223333 678999999999999999998876
No 157
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=32.21 E-value=50 Score=31.60 Aligned_cols=37 Identities=24% Similarity=0.442 Sum_probs=28.6
Q ss_pred eeEEEEeecccCccccC--cHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTG--GLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~G--G~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||+.|+.. .| |-.+.+.+||.+|+++|+.|.+|-..
T Consensus 2 ~~vi~v~s~------kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (260)
T 3q9l_A 2 ARIIVVTSG------KGGVGKTTSSAAIATGLAQKGKKTVVIDFA 40 (260)
T ss_dssp CEEEEEECS------STTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEECC------CCCCcHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 576666652 34 45668899999999999999999655
No 158
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=32.20 E-value=40 Score=29.48 Aligned_cols=36 Identities=19% Similarity=0.313 Sum_probs=29.2
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEe
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit 192 (662)
|||+++-. .. +|....++..+++.|.+.|++|.++.
T Consensus 2 ~ki~I~Y~--S~---tGnT~~~A~~ia~~l~~~g~~v~~~~ 37 (147)
T 2hna_A 2 ADITLISG--ST---LGGAEYVAEHLAEKLEEAGFTTETLH 37 (147)
T ss_dssp CSEEEECC--TT---SCCCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CeEEEEEE--CC---chHHHHHHHHHHHHHHHCCCceEEec
Confidence 57776632 23 69999999999999999999998873
No 159
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=32.19 E-value=51 Score=32.00 Aligned_cols=39 Identities=26% Similarity=0.388 Sum_probs=29.2
Q ss_pred CceeEEEEeecccCccccCcHH--HHHhhHHHHHHhCCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~--~~~~~La~~L~~~GheV~Vit~~ 194 (662)
+.|||+.|++. .||+| +.+.+||.+|+++|++|.+|-..
T Consensus 16 ~~~~vI~v~s~------kGGvGKTT~a~nLA~~la~~G~~VlliD~D 56 (262)
T 2ph1_A 16 KIKSRIAVMSG------KGGVGKSTVTALLAVHYARQGKKVGILDAD 56 (262)
T ss_dssp TCSCEEEEECS------SSCTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCeEEEEEcC------CCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 34666666642 35555 58899999999999999998654
No 160
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=31.97 E-value=61 Score=31.65 Aligned_cols=44 Identities=27% Similarity=0.319 Sum_probs=34.5
Q ss_pred cccCCceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 146 AQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 146 ~~~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
....+.||.+||+..- + .-|-..++..|+++|+++|+.|..+=|
T Consensus 20 ~~~~~~m~~i~Itgt~-t---~vGKT~vt~gL~~~l~~~G~~V~~fKP 63 (251)
T 3fgn_A 20 LYFQSHMTILVVTGTG-T---GVGKTVVCAALASAARQAGIDVAVCKP 63 (251)
T ss_dssp --CCSSCEEEEEEESS-T---TSCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HhcccCCCEEEEEeCC-C---CCcHHHHHHHHHHHHHHCCCeEEEEee
Confidence 3445679999999753 2 357888999999999999999999854
No 161
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=31.97 E-value=35 Score=32.79 Aligned_cols=34 Identities=24% Similarity=0.494 Sum_probs=25.7
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
||+++|+.- +||+| ..+++.|+++|++|.++...
T Consensus 1 mk~vlVTGa------s~gIG---~~~a~~l~~~G~~V~~~~r~ 34 (257)
T 1fjh_A 1 MSIIVISGC------ATGIG---AATRKVLEAAGHQIVGIDIR 34 (257)
T ss_dssp CCEEEEETT------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCC------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 677778742 57777 45788999999998887543
No 162
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=31.76 E-value=61 Score=28.98 Aligned_cols=39 Identities=15% Similarity=0.079 Sum_probs=31.3
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
..||++|.. .+ .|....++..+++.|.+.|++|.++...
T Consensus 4 ~~kv~IvY~--S~---~GnT~~iA~~ia~~l~~~g~~v~~~~~~ 42 (159)
T 3fni_A 4 ETSIGVFYV--SE---YGYSDRLAQAIINGITKTGVGVDVVDLG 42 (159)
T ss_dssp CCEEEEEEC--TT---STTHHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEEE--CC---ChHHHHHHHHHHHHHHHCCCeEEEEECc
Confidence 356777753 34 5999999999999999999999988544
No 163
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=31.74 E-value=2.1e+02 Score=23.35 Aligned_cols=109 Identities=11% Similarity=0.149 Sum_probs=62.2
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHH-H--hcCEEEEcCCC-CCCcHHHHHHHHc-----CC
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT-A--GCDILLMPSRF-EPCGLNQLYAMRY-----GT 567 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll-~--~aDi~v~PS~~-E~fgl~~lEAma~-----G~ 567 (662)
..+++++.+.+ .....++.+-.......+.... +.......+ . ..|++++-... +.-|+.+++.+.. .+
T Consensus 5 ~~~iLivdd~~-~~~~~l~~~L~~~g~~~v~~~~-~~~~a~~~~~~~~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~ 82 (129)
T 3h1g_A 5 SMKLLVVDDSS-TMRRIIKNTLSRLGYEDVLEAE-HGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEI 82 (129)
T ss_dssp -CCEEEECSCH-HHHHHHHHHHHHTTCCCEEEES-SHHHHHHHHHHCTTCCEEEECSCCSSSCHHHHHHHHHTSTTCTTC
T ss_pred CcEEEEEeCCH-HHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCC
Confidence 34677777664 3333333333332222122222 332222333 2 46888765443 4568888888764 56
Q ss_pred cEEE-eCCcccc---cccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 568 IPVV-HATGGLR---DTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 568 PvVa-s~~gg~~---eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
|+|. |...... +.+.. |..+++..|.+++++.++|+.++.
T Consensus 83 pii~~s~~~~~~~~~~~~~~----------g~~~~l~KP~~~~~L~~~l~~~l~ 126 (129)
T 3h1g_A 83 PIIMITAEGGKAEVITALKA----------GVNNYIVKPFTPQVLKEKLEVVLG 126 (129)
T ss_dssp CEEEEESCCSHHHHHHHHHH----------TCCEEEESCCCHHHHHHHHHHHHC
T ss_pred eEEEEeCCCChHHHHHHHHc----------CccEEEeCCCCHHHHHHHHHHHhc
Confidence 7777 4333222 23333 678999999999999999988764
No 164
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=31.45 E-value=30 Score=32.39 Aligned_cols=33 Identities=24% Similarity=0.358 Sum_probs=24.9
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||++... +|++| ..+++.|.++||+|.+++-.
T Consensus 1 M~ilItGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIVGS-------TGRVG---KSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp CEEEEEST-------TSHHH---HHHHHHHTTSSCEEEEEESS
T ss_pred CeEEEECC-------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 78775542 46666 56788999999999998754
No 165
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=31.25 E-value=41 Score=32.38 Aligned_cols=41 Identities=10% Similarity=0.080 Sum_probs=30.2
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhC-CCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR-GHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~-GheV~Vit~~ 194 (662)
+|||++|... |. ..|-....+..++..|.+. |++|.++...
T Consensus 1 MmkIliI~gS--~r-~~s~T~~la~~i~~~l~~~~g~~v~~~dl~ 42 (242)
T 1sqs_A 1 MNKIFIYAGV--RN-HNSKTLEYTKRLSSIISSRNNVDISFRTPF 42 (242)
T ss_dssp CCEEEEEECC--CC-TTCHHHHHHHHHHHHHHHHSCCEEEEECTT
T ss_pred CCeEEEEECC--CC-CCChHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence 3799999864 53 1355666777888888888 9999998543
No 166
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=30.55 E-value=58 Score=29.78 Aligned_cols=39 Identities=5% Similarity=0.076 Sum_probs=28.6
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhC------CCcEEEEee
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR------GHRVMVVSP 193 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~------GheV~Vit~ 193 (662)
|||++|... |.. .|-....+..++..|.+. |++|.++-.
T Consensus 1 Mkilii~gS--~r~-~~~t~~la~~~~~~l~~~~~~~~~g~~v~~~dl 45 (191)
T 1t0i_A 1 MKVGIIMGS--VRA-KRVCPEIAAYVKRTIENSEELIDQKLKIQVVDL 45 (191)
T ss_dssp CEEEEEECC--CCS-SCSHHHHHHHHHHHHHTCTTTTTTTCEEEEECH
T ss_pred CeEEEEeCC--CCC-CCchHHHHHHHHHHHHHhhccCCCCceEEEEeh
Confidence 899999875 431 355666777778888876 799999854
No 167
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=30.50 E-value=30 Score=34.76 Aligned_cols=41 Identities=5% Similarity=-0.167 Sum_probs=28.0
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEe
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit 192 (662)
.+|||+++..-..+- ..-.-.....++++|.+.||+|.++.
T Consensus 12 ~~~~v~vl~gg~s~E--~~vsl~s~~~v~~al~~~g~~v~~i~ 52 (317)
T 4eg0_A 12 RFGKVAVLFGGESAE--REVSLTSGRLVLQGLRDAGIDAHPFD 52 (317)
T ss_dssp GGCEEEEECCCSSTT--HHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hcceEEEEECCCCCc--ceeeHHHHHHHHHHHHHCCCEEEEEe
Confidence 468999997532211 11112356889999999999999996
No 168
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=30.33 E-value=59 Score=30.60 Aligned_cols=39 Identities=28% Similarity=0.384 Sum_probs=28.1
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||+.|+.. -+ .-|-.+.+.+||.+|+++|++|.+|-..
T Consensus 2 ~~~i~v~s~-kg---GvGKTt~a~~LA~~la~~g~~VlliD~D 40 (237)
T 1g3q_A 2 GRIISIVSG-KG---GTGKTTVTANLSVALGDRGRKVLAVDGD 40 (237)
T ss_dssp CEEEEEECS-ST---TSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred ceEEEEecC-CC---CCCHHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 466666542 11 2355668899999999999999999654
No 169
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=30.19 E-value=64 Score=30.86 Aligned_cols=39 Identities=10% Similarity=0.171 Sum_probs=31.8
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
+||.+||+..- + .-|-..++..|+++|+++|+.|..+=|
T Consensus 3 ~mk~i~Itgt~-t---~vGKT~vt~~L~~~l~~~G~~V~~~KP 41 (228)
T 3of5_A 3 AMKKFFIIGTD-T---EVGKTYISTKLIEVCEHQNIKSLCLKP 41 (228)
T ss_dssp TCEEEEEEESS-S---SSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCcEEEEEeCC-C---CCCHHHHHHHHHHHHHHCCCeeEEecc
Confidence 58989998752 2 357888999999999999999999743
No 170
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=30.08 E-value=30 Score=32.92 Aligned_cols=36 Identities=11% Similarity=0.143 Sum_probs=25.5
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCC-CcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG-HRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~G-heV~Vit~~ 194 (662)
.+||.++|+.- +||+| ..+++.|.++| ++|.+++-.
T Consensus 21 ~~mk~vlVtGa------tG~iG---~~l~~~L~~~G~~~V~~~~R~ 57 (236)
T 3qvo_A 21 GHMKNVLILGA------GGQIA---RHVINQLADKQTIKQTLFARQ 57 (236)
T ss_dssp -CCEEEEEETT------TSHHH---HHHHHHHTTCTTEEEEEEESS
T ss_pred CcccEEEEEeC------CcHHH---HHHHHHHHhCCCceEEEEEcC
Confidence 45676667641 47777 56788999999 899888644
No 171
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=30.05 E-value=25 Score=35.17 Aligned_cols=36 Identities=28% Similarity=0.377 Sum_probs=24.8
Q ss_pred cccCCceeEEEEeecccCccccCcHHHHHhhHHHHHHhC-----C-CcEEEEe
Q 006091 146 AQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR-----G-HRVMVVS 192 (662)
Q Consensus 146 ~~~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~-----G-heV~Vit 192 (662)
+|...+|||++|.. |.+|. .++..|.+. | |+|+++.
T Consensus 3 ~m~~~~m~I~iiG~--------G~mG~---~~a~~L~~~~~~~~g~~~V~~~~ 44 (317)
T 2qyt_A 3 AMNQQPIKIAVFGL--------GGVGG---YYGAMLALRAAATDGLLEVSWIA 44 (317)
T ss_dssp ----CCEEEEEECC--------SHHHH---HHHHHHHHHHHHTTSSEEEEEEC
T ss_pred CCCCCCCEEEEECc--------CHHHH---HHHHHHHhCccccCCCCCEEEEE
Confidence 45556799999863 65664 567778888 9 9999985
No 172
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=29.89 E-value=34 Score=32.34 Aligned_cols=34 Identities=21% Similarity=0.432 Sum_probs=24.6
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
||+++|+.- .||+| ..+++.|.++|+.|.++...
T Consensus 1 Mk~vlVTGa------s~gIG---~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGA------SSGLG---AELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEEST------TSHHH---HHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEecC------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 787888752 47777 56888999999998887543
No 173
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=29.84 E-value=40 Score=31.42 Aligned_cols=32 Identities=28% Similarity=0.507 Sum_probs=23.1
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
|||+++. |.+..-..++..|.+.||+|.++..
T Consensus 1 m~i~iiG----------a~G~~G~~ia~~l~~~g~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLG----------GTGNLGKGLALRLATLGHEIVVGSR 32 (212)
T ss_dssp CEEEEET----------TTSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CeEEEEc----------CCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 6777663 3444446788999999999998754
No 174
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=29.81 E-value=31 Score=31.14 Aligned_cols=38 Identities=26% Similarity=0.267 Sum_probs=28.0
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
+|||+++-. .. +|....++..+++.|.+.|++|.++..
T Consensus 9 ~~ki~I~Y~--S~---tGnT~~~A~~ia~~l~~~g~~v~~~~~ 46 (167)
T 1ykg_A 9 MPGITIISA--SQ---TGNARRVAEALRDDLLAAKLNVKLVNA 46 (167)
T ss_dssp ---CEEEEE--CS---SSHHHHHHHHHHHHHHHHTCCCEEEEG
T ss_pred CCeEEEEEE--CC---chHHHHHHHHHHHHHHHCCCceEEeeh
Confidence 457766642 23 688999999999999999999988754
No 175
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=29.78 E-value=58 Score=32.35 Aligned_cols=40 Identities=18% Similarity=0.204 Sum_probs=29.4
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
++|||+.|+. -+ .-|-.+.+.+||.+|+++|+.|.+|-..
T Consensus 39 ~~~~vI~v~~--KG---GvGKTT~a~nLA~~La~~G~~VlliD~D 78 (307)
T 3end_A 39 TGAKVFAVYG--KG---GIGKSTTSSNLSAAFSILGKRVLQIGCD 78 (307)
T ss_dssp -CCEEEEEEC--ST---TSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred CCceEEEEEC--CC---CccHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4577776763 22 2345568899999999999999999665
No 176
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=29.75 E-value=48 Score=30.44 Aligned_cols=42 Identities=5% Similarity=0.043 Sum_probs=29.5
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCC--CcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG--HRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~G--heV~Vit~~ 194 (662)
+|||++|... |....|-....+..++..|.+.| ++|.++-..
T Consensus 1 Mmkilii~~S--~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl~ 44 (201)
T 1t5b_A 1 MSKVLVLKSS--ILAGYSQSGQLTDYFIEQWREKHVADEITVRDLA 44 (201)
T ss_dssp CCEEEEEECC--SSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEETT
T ss_pred CCeEEEEEeC--CCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Confidence 3799999864 52112445667778888898876 899888543
No 177
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=29.73 E-value=29 Score=33.50 Aligned_cols=33 Identities=21% Similarity=0.153 Sum_probs=24.9
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
||+++|+.- +||+|. .+++.|+++|++|.++..
T Consensus 1 Mk~vlVTGa------s~gIG~---~ia~~l~~~G~~V~~~~r 33 (254)
T 1zmt_A 1 MSTAIVTNV------KHFGGM---GSALRLSEAGHTVACHDE 33 (254)
T ss_dssp -CEEEESST------TSTTHH---HHHHHHHHTTCEEEECCG
T ss_pred CeEEEEeCC------CchHHH---HHHHHHHHCCCEEEEEeC
Confidence 788888752 577874 588899999999888653
No 178
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=29.69 E-value=2.3e+02 Score=23.10 Aligned_cols=108 Identities=10% Similarity=0.090 Sum_probs=61.4
Q ss_pred eEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHH--HhcCEEEEcCCC-CCCcHHHHHHHHc---CCcEEE
Q 006091 498 IQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT--AGCDILLMPSRF-EPCGLNQLYAMRY---GTIPVV 571 (662)
Q Consensus 498 ~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll--~~aDi~v~PS~~-E~fgl~~lEAma~---G~PvVa 571 (662)
++++++.+.+ .....+..+-......+.....-..+ ....+ ...|++++-... +.-|+.+++.+.. .+|+|.
T Consensus 2 ~~ilivdd~~-~~~~~l~~~L~~~g~~v~~~~~~~~~-a~~~~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~ 79 (134)
T 3f6c_A 2 LNAIIIDDHP-LAIAAIRNLLIKNDIEILAELTEGGS-AVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIII 79 (134)
T ss_dssp EEEEEECCCH-HHHHHHHHHHHHTTEEEEEEESSSTT-HHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEE
T ss_pred eEEEEEcCCH-HHHHHHHHHHhhCCcEEEEEcCCHHH-HHHHHHhcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEE
Confidence 4677777664 33333333333333333323321222 22333 357888876654 4567777777664 566666
Q ss_pred -eCCcc---cccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 572 -HATGG---LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 572 -s~~gg---~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
|.... ..+.+.. |..+++..|.+.+++.++|..++.
T Consensus 80 ~s~~~~~~~~~~~~~~----------g~~~~l~kp~~~~~l~~~i~~~~~ 119 (134)
T 3f6c_A 80 VSAKNDHFYGKHCADA----------GANGFVSKKEGMNNIIAAIEAAKN 119 (134)
T ss_dssp EECC---CTHHHHHHT----------TCSEEEEGGGCTHHHHHHHHHHHT
T ss_pred EeCCCChHHHHHHHHh----------CCCEEEeCCCCHHHHHHHHHHHHC
Confidence 33222 2233333 678999999999999999988875
No 179
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=29.61 E-value=2.4e+02 Score=23.33 Aligned_cols=107 Identities=9% Similarity=0.044 Sum_probs=62.1
Q ss_pred eEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH--hcCEEEEcCCC-CCCcHHHHHHHHc-----CCcE
Q 006091 498 IQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMRY-----GTIP 569 (662)
Q Consensus 498 ~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~--~aDi~v~PS~~-E~fgl~~lEAma~-----G~Pv 569 (662)
.+++++.+.+ .....+..+-......+. .. .+.+...+.+. ..|++++-... +.-|+.+++.+.. .+|+
T Consensus 5 ~~iLivdd~~-~~~~~l~~~L~~~g~~v~-~~-~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pi 81 (136)
T 3t6k_A 5 HTLLIVDDDD-TVAEMLELVLRGAGYEVR-RA-ASGEEALQQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPI 81 (136)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHHTTCEEE-EE-SSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCE
T ss_pred CEEEEEeCCH-HHHHHHHHHHHHCCCEEE-Ee-CCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccE
Confidence 4566666653 333333333333222333 22 13333333443 46888776543 4567888877754 5677
Q ss_pred EE-eCCcccc---cccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 570 VV-HATGGLR---DTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 570 Va-s~~gg~~---eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
|. |..+... +.+.. |..+++..|.+.+++..+|..++.
T Consensus 82 i~~t~~~~~~~~~~~~~~----------ga~~~l~KP~~~~~L~~~i~~~l~ 123 (136)
T 3t6k_A 82 LMLTAQGDISAKIAGFEA----------GANDYLAKPFEPQELVYRVKNILA 123 (136)
T ss_dssp EEEECTTCHHHHHHHHHH----------TCSEEEETTCCHHHHHHHHHHHHH
T ss_pred EEEecCCCHHHHHHHHhc----------CcceEEeCCCCHHHHHHHHHHHHh
Confidence 76 4333222 22333 678999999999999999998876
No 180
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=29.59 E-value=78 Score=26.68 Aligned_cols=43 Identities=7% Similarity=0.013 Sum_probs=29.6
Q ss_pred ccCCceeEEEEeecccCccccCcHHH-HHhhHHHHHHhCCCcEEEEeecC
Q 006091 147 QTRVSYNIVFVTAEAAPYSKTGGLGD-VCGSLPVALAARGHRVMVVSPRY 195 (662)
Q Consensus 147 ~~~~~MkIl~vs~~~~P~~~~GG~~~-~~~~La~~L~~~GheV~Vit~~~ 195 (662)
...+++||+++|.. .=|.+. ....+-+.+.+.|.++.|-+...
T Consensus 17 ~~~~~kkIlvvC~s------G~gTS~ll~~kl~~~~~~~gi~~~V~~~~~ 60 (113)
T 1tvm_A 17 FQGSKRKIIVACGG------AVATSTMAAEEIKELCQSHNIPVELIQCRV 60 (113)
T ss_dssp CSCSSEEEEEESCS------CSSHHHHHHHHHHHHHHHTTCCEEEEEECT
T ss_pred hcccccEEEEECCC------CHHHHHHHHHHHHHHHHHcCCeEEEEEecH
Confidence 33456889999962 113333 46888889999999987766543
No 181
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=29.52 E-value=51 Score=31.21 Aligned_cols=39 Identities=15% Similarity=0.202 Sum_probs=29.0
Q ss_pred CceeEEEEeecccCccccCc--HHHHHhhHHHHHHhC-CCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGG--LGDVCGSLPVALAAR-GHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG--~~~~~~~La~~L~~~-GheV~Vit~~ 194 (662)
++|||+.|++. .|| -.+.+.+||.+|+++ |+.|.+|-..
T Consensus 2 ~~~~vI~v~s~------kGGvGKTt~a~~LA~~la~~~g~~VlliD~D 43 (245)
T 3ea0_A 2 NAKRVFGFVSA------KGGDGGSCIAANFAFALSQEPDIHVLAVDIS 43 (245)
T ss_dssp -CCEEEEEEES------STTSSHHHHHHHHHHHHTTSTTCCEEEEECC
T ss_pred CCCeEEEEECC------CCCcchHHHHHHHHHHHHhCcCCCEEEEECC
Confidence 35777666652 344 456788999999999 9999999655
No 182
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=29.08 E-value=64 Score=32.25 Aligned_cols=42 Identities=21% Similarity=0.419 Sum_probs=32.1
Q ss_pred CCceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 149 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
..++||+.|+.. .| .-|-.+.+.+||..|++.|..|.+|-..
T Consensus 101 ~~~~kvI~vts~-kg---G~GKTtva~nLA~~lA~~G~rVLLID~D 142 (299)
T 3cio_A 101 ETENNILMITGA-TP---DSGKTFVSSTLAAVIAQSDQKVLFIDAD 142 (299)
T ss_dssp SCSCCEEEEEES-SS---SSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCeEEEEECC-CC---CCChHHHHHHHHHHHHhCCCcEEEEECC
Confidence 346788888763 12 2466778999999999999999999654
No 183
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=29.00 E-value=46 Score=31.20 Aligned_cols=41 Identities=17% Similarity=0.074 Sum_probs=28.8
Q ss_pred ceeEEEEeecccCccccCc-HHHHHhhHHHHHHhC--CCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGG-LGDVCGSLPVALAAR--GHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG-~~~~~~~La~~L~~~--GheV~Vit~~ 194 (662)
+|||++|... |.. .+| ....+..+++.|.+. |++|.++-..
T Consensus 1 MmkiLii~gS--pr~-~~s~t~~l~~~~~~~~~~~~~g~~v~~~dL~ 44 (212)
T 3r6w_A 1 MSRILAVHAS--PRG-ERSQSRRLAEVFLAAYREAHPQARVARREVG 44 (212)
T ss_dssp CCCEEEEECC--SCS-TTCHHHHHHHHHHHHHHHHCTTCCEEEEESS
T ss_pred CCEEEEEEeC--CCC-CCCHHHHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 4899999875 531 123 455667778888887 9999998643
No 184
>2f5x_A BUGD; periplasmic binding protein, transport protein; 1.72A {Bordetella pertussis tohama I}
Probab=28.95 E-value=4.4e+02 Score=26.19 Aligned_cols=156 Identities=10% Similarity=0.037 Sum_probs=83.8
Q ss_pred CEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCC--hHHHHHHHH-hcCE
Q 006091 469 PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFN--VPISHRITA-GCDI 545 (662)
Q Consensus 469 ~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~ll~-~aDi 545 (662)
+.++.+..=.+.|.++.|+.+++.-.. .+.+-..|.|... .-..+.+.+....++. .++|. .+.+.+++. ..|+
T Consensus 112 ~~~lvv~~ds~~~sl~dL~~~ak~~p~-~~~~g~~g~Gs~~-hl~~~~l~~~~Gi~~~-~Vpy~G~~~a~~aL~~G~VD~ 188 (312)
T 2f5x_A 112 PMTIIARGDFPPNNIKELAEYVKKNAD-KISLANAGIGAAS-HLCGTMLVEALGVNLL-TIPYKGTAPAMNDLLGKQVDL 188 (312)
T ss_dssp EEEEEECTTCSCCSHHHHHHHHHHHGG-GCEEEESSTTSHH-HHHHHHHHHHHTCCCE-EEECSSHHHHHHHHHTTSSCE
T ss_pred cEEEEEeCCCCCCCHHHHHHHHHhCCC-ceEEeCCCCCcHH-HHHHHHHHHHHCCCeE-EeccCChHHHHHHHHcCCccE
Confidence 456666666789999999988775311 3555555545321 1112222222233333 23342 233334554 7888
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCc-EEEeC----Ccccccc--cccccccccCCCCccceEEECCCCHHHHHHHHHHHHHH
Q 006091 546 LLMPSRFEPCGLNQLYAMRYGTI-PVVHA----TGGLRDT--VENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 618 (662)
Q Consensus 546 ~v~PS~~E~fgl~~lEAma~G~P-vVas~----~gg~~ei--i~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~ 618 (662)
++... -.+++.+..|.. +|+.. ...++++ +.+.. +....-..-.|++++.+.++++.++|.+++..
T Consensus 189 ~~~~~------~~~~~~i~~g~lr~Lav~~~~r~~~~pdvPt~~E~G-~~~~~~~~w~gl~ap~g~p~~vv~~l~~al~~ 261 (312)
T 2f5x_A 189 MCDQT------TNTTQQITSGKVKAYAVTSLKRVPTLPDLPTMDESG-YKGFEVGIWHGMWAPKGTPKPVVDKLVKSLQA 261 (312)
T ss_dssp EEEEH------HHHHHHHHTTSSEEEEECSSSCCTTSTTSCBTTTTT-CTTCCCEEEEEEEEETTCCHHHHHHHHHHHHH
T ss_pred EEech------HHHHHHHHcCCeEEEEEcCccchhhcCCCCCHhhcC-CCCeeEEEEEEEEEcCCCCHHHHHHHHHHHHH
Confidence 87653 245566667754 34321 1112221 10000 00000012368888888888999999998888
Q ss_pred hhhCHHHHHHHHHHHH
Q 006091 619 YREHKSSWEGLMRRGM 634 (662)
Q Consensus 619 ~~~~~~~~~~l~~~~~ 634 (662)
...+++..+.+...++
T Consensus 262 ~~~~p~~~~~~~~~g~ 277 (312)
T 2f5x_A 262 GLADPKFQERMKQLGA 277 (312)
T ss_dssp HHTCHHHHHHHHHTTC
T ss_pred HHcCHHHHHHHHHCCC
Confidence 7788887777766553
No 185
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=28.71 E-value=65 Score=30.96 Aligned_cols=39 Identities=28% Similarity=0.354 Sum_probs=27.8
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||+.|+.. -+ .-|-.+.+.+||.+|+++|++|.+|-..
T Consensus 2 ~~~I~v~s~-kg---GvGKTt~a~~LA~~la~~g~~VlliD~D 40 (263)
T 1hyq_A 2 VRTITVASG-KG---GTGKTTITANLGVALAQLGHDVTIVDAD 40 (263)
T ss_dssp CEEEEEEES-SS---CSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEECC-CC---CCCHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 466656542 11 2355678899999999999999999654
No 186
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=28.67 E-value=41 Score=34.67 Aligned_cols=41 Identities=22% Similarity=0.293 Sum_probs=31.9
Q ss_pred CCceeEEEEeecccCccccCcHHHHHhhHHHHHH--hCCCcEEEEeec
Q 006091 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALA--ARGHRVMVVSPR 194 (662)
Q Consensus 149 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~--~~GheV~Vit~~ 194 (662)
...|||++++.. + .-|-.+.+.+||..|+ +.|++|.+|...
T Consensus 15 ~~~~~i~~~~gk--G---GvGKTt~a~~lA~~la~~~~g~~vllid~D 57 (348)
T 3io3_A 15 HDSLKWIFVGGK--G---GVGKTTTSSSVAVQLALAQPNEQFLLISTD 57 (348)
T ss_dssp CTTCSEEEEECS--T---TSSHHHHHHHHHHHHHHHCTTSCEEEEECC
T ss_pred CCCcEEEEEeCC--C---CCcHHHHHHHHHHHHHHhcCCCeEEEEECC
Confidence 356899999862 1 2344557889999999 999999999876
No 187
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=28.65 E-value=43 Score=34.04 Aligned_cols=37 Identities=27% Similarity=0.510 Sum_probs=29.2
Q ss_pred ceeEEEEeecccCccccCcHH--HHHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~--~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.++|++++. .||+| +.+.+||.+|+++|++|.++...
T Consensus 18 ~~~i~v~sg-------kGGvGKTTva~~LA~~lA~~G~rVllvD~D 56 (329)
T 2woo_A 18 SLKWIFVGG-------KGGVGKTTTSCSLAIQMSKVRSSVLLISTD 56 (329)
T ss_dssp TCCEEEEEC-------SSSSSHHHHHHHHHHHHHTSSSCEEEEECC
T ss_pred CCEEEEEeC-------CCCCcHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 467877765 25554 58889999999999999999765
No 188
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=28.44 E-value=44 Score=34.45 Aligned_cols=39 Identities=21% Similarity=0.451 Sum_probs=31.0
Q ss_pred CceeEEEEeecccCccccCcHH--HHHhhHHHHHH--hCCCcEEEEeecC
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLG--DVCGSLPVALA--ARGHRVMVVSPRY 195 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~--~~~~~La~~L~--~~GheV~Vit~~~ 195 (662)
..++|++++.. ||+| +.+.+||.+|+ +.|++|.+|....
T Consensus 16 ~~~~i~v~sgK-------GGvGKTTvaanLA~~lA~~~~G~rVLLvD~D~ 58 (354)
T 2woj_A 16 TTHKWIFVGGK-------GGVGKTTSSCSIAIQMALSQPNKQFLLISTDP 58 (354)
T ss_dssp SSCCEEEEEES-------TTSSHHHHHHHHHHHHHHHCTTSCEEEEECCS
T ss_pred CCcEEEEEeCC-------CCCcHHHHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 35778888863 5555 58889999999 9999999998764
No 189
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=28.37 E-value=98 Score=29.47 Aligned_cols=38 Identities=24% Similarity=0.266 Sum_probs=23.9
Q ss_pred cCCceeEEEEeecccCccccCcHHHHHhhHHHHHHh-CCCcEEEEeec
Q 006091 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSPR 194 (662)
Q Consensus 148 ~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~-~GheV~Vit~~ 194 (662)
...+|||+++.+ |.+.....|..++.+ .+++|..|..+
T Consensus 9 ~~~~~ri~vl~S---------G~gsnl~all~~~~~~~~~eI~~Vis~ 47 (215)
T 3da8_A 9 PSAPARLVVLAS---------GTGSLLRSLLDAAVGDYPARVVAVGVD 47 (215)
T ss_dssp CCSSEEEEEEES---------SCCHHHHHHHHHSSTTCSEEEEEEEES
T ss_pred CCCCcEEEEEEe---------CChHHHHHHHHHHhccCCCeEEEEEeC
Confidence 346789998863 345566777776644 34577666555
No 190
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=28.30 E-value=58 Score=31.70 Aligned_cols=40 Identities=18% Similarity=0.066 Sum_probs=29.4
Q ss_pred CceeEEEEeecccCccccCcH-HHHHhhHHHHHHhCCCcEEEEee
Q 006091 150 VSYNIVFVTAEAAPYSKTGGL-GDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~-~~~~~~La~~L~~~GheV~Vit~ 193 (662)
.+|||++|+.. |. .+|. ...+..+++.+.+.|++|.++-.
T Consensus 33 ~~mkIliI~GS--~r--~~s~t~~La~~~~~~l~~~g~eve~idL 73 (247)
T 2q62_A 33 HRPRILILYGS--LR--TVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp SCCEEEEEECC--CC--SSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCCeEEEEEcc--CC--CCCHHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 46899999975 43 2454 45666688888889999999853
No 191
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=28.28 E-value=51 Score=30.74 Aligned_cols=35 Identities=11% Similarity=0.254 Sum_probs=24.7
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHH-hCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALA-ARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~-~~GheV~Vit~~ 194 (662)
+||.++|+.- +||+| ..+++.|. +.||+|.+++..
T Consensus 4 mmk~vlVtGa------sg~iG---~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 4 MYXYITILGA------AGQIA---QXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp SCSEEEEEST------TSHHH---HHHHHHHHHHCCCEEEEEESS
T ss_pred eEEEEEEEeC------CcHHH---HHHHHHHHhcCCceEEEEecC
Confidence 4785556531 47777 56778888 899999988644
No 192
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=28.01 E-value=1.5e+02 Score=28.04 Aligned_cols=34 Identities=24% Similarity=0.194 Sum_probs=22.6
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhC--CCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR--GHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~--GheV~Vit~~ 194 (662)
|||+++.+ |.+.....|..++.+. +|+|..|..+
T Consensus 1 ~ri~vl~S---------g~gsnl~ali~~~~~~~~~~~i~~Vis~ 36 (212)
T 1jkx_A 1 MNIVVLIS---------GNGSNLQAIIDACKTNKIKGTVRAVFSN 36 (212)
T ss_dssp CEEEEEES---------SCCHHHHHHHHHHHTTSSSSEEEEEEES
T ss_pred CEEEEEEE---------CCcHHHHHHHHHHHcCCCCceEEEEEeC
Confidence 68888764 2234567777777765 5787766555
No 193
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=27.53 E-value=42 Score=33.64 Aligned_cols=32 Identities=6% Similarity=0.041 Sum_probs=26.2
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
+|||+++.. | ....+++++.++||+|.++.+.
T Consensus 2 ~m~Ililg~---------g---~~~~l~~a~~~~G~~v~~~~~~ 33 (334)
T 2r85_A 2 KVRIATYAS---------H---SALQILKGAKDEGFETIAFGSS 33 (334)
T ss_dssp CSEEEEESS---------T---THHHHHHHHHHTTCCEEEESCG
T ss_pred ceEEEEECC---------h---hHHHHHHHHHhCCCEEEEEECC
Confidence 489998863 3 5678999999999999999765
No 194
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=27.53 E-value=3.1e+02 Score=24.22 Aligned_cols=109 Identities=13% Similarity=0.182 Sum_probs=62.3
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH--hcCEEEEcCCC-CCCcHHHHHHHHc---CCcEE
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMRY---GTIPV 570 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~--~aDi~v~PS~~-E~fgl~~lEAma~---G~PvV 570 (662)
..+++|+.+.+ .....+..+-......+ ... .+.....+.+. ..|++++-... +.-|+.+++.+.. .+|+|
T Consensus 7 ~~~iLivdd~~-~~~~~l~~~L~~~g~~v-~~~-~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii 83 (184)
T 3rqi_A 7 DKNFLVIDDNE-VFAGTLARGLERRGYAV-RQA-HNKDEALKLAGAEKFEFITVXLHLGNDSGLSLIAPLCDLQPDARIL 83 (184)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHHTTCEE-EEE-CSHHHHHHHHTTSCCSEEEECSEETTEESHHHHHHHHHHCTTCEEE
T ss_pred CCeEEEEcCCH-HHHHHHHHHHHHCCCEE-EEe-CCHHHHHHHHhhCCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEE
Confidence 35677776653 33333333322222232 222 13333334443 35777765432 4457777776654 67777
Q ss_pred E-eCCccc---ccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHH
Q 006091 571 V-HATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 618 (662)
Q Consensus 571 a-s~~gg~---~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~ 618 (662)
. |..... .+.+.. |..+++..|.+.+++..+|..++..
T Consensus 84 ~lt~~~~~~~~~~a~~~----------Ga~~~l~KP~~~~~L~~~i~~~~~~ 125 (184)
T 3rqi_A 84 VLTGYASIATAVQAVKD----------GADNYLAKPANVESILAALQTNASE 125 (184)
T ss_dssp EEESSCCHHHHHHHHHH----------TCSEEEESSCCHHHHHHHTSTTHHH
T ss_pred EEeCCCCHHHHHHHHHh----------CHHHheeCCCCHHHHHHHHHHHHHH
Confidence 7 433322 233344 7789999999999999999887753
No 195
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=27.24 E-value=67 Score=31.55 Aligned_cols=38 Identities=24% Similarity=0.219 Sum_probs=28.1
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||+.|+. -+ .-|-.+.+.+||.+|+++|++|.+|=..
T Consensus 2 MkvIavs~--KG---GvGKTT~a~nLA~~La~~G~rVlliD~D 39 (289)
T 2afh_E 2 MRQCAIYG--KG---GIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp CEEEEEEE--CT---TSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred ceEEEEeC--CC---cCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 77777753 12 2345557889999999999999999654
No 196
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=27.02 E-value=48 Score=31.92 Aligned_cols=36 Identities=14% Similarity=0.250 Sum_probs=26.0
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.+.|+++|+.- .||+| ..+++.|.++|++|.++...
T Consensus 20 ~m~k~vlITGa------s~gIG---~~la~~l~~~G~~V~~~~r~ 55 (251)
T 3orf_A 20 HMSKNILVLGG------SGALG---AEVVKFFKSKSWNTISIDFR 55 (251)
T ss_dssp --CCEEEEETT------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred ccCCEEEEECC------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 34577778742 46777 56889999999998888644
No 197
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=26.95 E-value=2e+02 Score=26.34 Aligned_cols=68 Identities=9% Similarity=0.132 Sum_probs=46.8
Q ss_pred HhcCEEEEcCCC-CCCcHHHHHHHH---cCCcEEEe-CCccc---ccccccccccccCCCCccceEEECCCCHHHHHHHH
Q 006091 541 AGCDILLMPSRF-EPCGLNQLYAMR---YGTIPVVH-ATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTAL 612 (662)
Q Consensus 541 ~~aDi~v~PS~~-E~fgl~~lEAma---~G~PvVas-~~gg~---~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI 612 (662)
...|++++--.. +.-|+.+++.+. ..+|+|.- ..... .+.+.. |..|++..|.+.+++.++|
T Consensus 42 ~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~~----------ga~~~l~Kp~~~~~L~~~i 111 (220)
T 1p2f_A 42 EAFHVVVLDVMLPDYSGYEICRMIKETRPETWVILLTLLSDDESVLKGFEA----------GADDYVTKPFNPEILLARV 111 (220)
T ss_dssp SCCSEEEEESBCSSSBHHHHHHHHHHHCTTSEEEEEESCCSHHHHHHHHHH----------TCSEEEESSCCHHHHHHHH
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEEcCCCHHHHHHHHHc----------CCCEEEECCCCHHHHHHHH
Confidence 567888865543 445777777665 46787773 33322 222333 6789999999999999999
Q ss_pred HHHHHH
Q 006091 613 RFAIRT 618 (662)
Q Consensus 613 ~~~l~~ 618 (662)
..++..
T Consensus 112 ~~~~~~ 117 (220)
T 1p2f_A 112 KRFLER 117 (220)
T ss_dssp HHHHHH
T ss_pred HHHHcc
Confidence 998864
No 198
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=26.70 E-value=61 Score=30.47 Aligned_cols=35 Identities=14% Similarity=0.117 Sum_probs=27.0
Q ss_pred eeEEEEeecccCccccCc-HHHHHhhHHHHHHhC-CCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGG-LGDVCGSLPVALAAR-GHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG-~~~~~~~La~~L~~~-GheV~Vit~~ 194 (662)
|||++-.. |+ ...++.++.+.|.+. |++|.||.+.
T Consensus 1 ~~IllgvT--------Gsiaa~k~~~ll~~L~~~~g~~V~vv~T~ 37 (197)
T 1sbz_A 1 MKLIVGMT--------GATGAPLGVALLQALREMPNVETHLVMSK 37 (197)
T ss_dssp CEEEEEEC--------SSSCHHHHHHHHHHHHTCTTCEEEEEECH
T ss_pred CEEEEEEe--------ChHHHHHHHHHHHHHHhccCCEEEEEECc
Confidence 67776653 33 335789999999999 9999999754
No 199
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=26.66 E-value=52 Score=32.04 Aligned_cols=34 Identities=32% Similarity=0.419 Sum_probs=25.9
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
..|+++|+.- +||+| ..+++.|+++|++|.++..
T Consensus 20 ~~k~~lVTGa------s~gIG---~~ia~~l~~~G~~V~~~~r 53 (267)
T 1vl8_A 20 RGRVALVTGG------SRGLG---FGIAQGLAEAGCSVVVASR 53 (267)
T ss_dssp TTCEEEEETT------TSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECC------CCHHH---HHHHHHHHHCCCEEEEEeC
Confidence 4577888752 57777 5688999999999988754
No 200
>3klo_A Transcriptional regulator VPST; REC domain, HTH domain, DNA-binding, transcription regulation; HET: C2E TAR; 2.80A {Vibrio cholerae} PDB: 3kln_A*
Probab=26.54 E-value=1.9e+02 Score=26.65 Aligned_cols=114 Identities=7% Similarity=-0.011 Sum_probs=61.5
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHH--HhcCEEEEcCCC-CCCcHHHHHHHHc----CCcE
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT--AGCDILLMPSRF-EPCGLNQLYAMRY----GTIP 569 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll--~~aDi~v~PS~~-E~fgl~~lEAma~----G~Pv 569 (662)
..+++++.+.+.....+...+.......+.....-..+.+..++ ...|++++--.. +.-|+.+++.+.. .+|+
T Consensus 7 ~~~IlivdD~~~~~~~l~~~L~~~~~~~v~~~~~~~~~~~~~~~~~~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~i 86 (225)
T 3klo_A 7 KLNVRMLSDVCMQSRLLKEALESKLPLALEITPFSELWLEENKPESRSIQMLVIDYSRISDDVLTDYSSFKHISCPDAKE 86 (225)
T ss_dssp SEEEEEESCCSHHHHHHHHHHHHHSSEEEEEECGGGHHHHTTCSGGGGCCEEEEEGGGCCHHHHHHHHHHHHHHCTTCEE
T ss_pred ceEEEEEcCcHHHHHHHHHHHhhCCCceEEEEeCCcHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHhhCCCCcE
Confidence 46777887765333333333332322233322211222121112 356888865443 3457777766644 6777
Q ss_pred EE-eCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 570 VV-HATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 570 Va-s~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
|. |..........-+ ..|..|++..|.+++++..+|..++.
T Consensus 87 i~lt~~~~~~~~~~~~-------~~Ga~~~l~Kp~~~~~L~~~i~~~~~ 128 (225)
T 3klo_A 87 VIINCPQDIEHKLLFK-------WNNLAGVFYIDDDMDTLIKGMSKILQ 128 (225)
T ss_dssp EEEEECTTCCHHHHTT-------STTEEEEEETTCCHHHHHHHHHHHHT
T ss_pred EEEECCcchhHHHHHH-------HhCCCEEEecCCCHHHHHHHHHHHHC
Confidence 76 3332222221110 12778999999999999999998875
No 201
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=26.36 E-value=2.5e+02 Score=22.56 Aligned_cols=109 Identities=10% Similarity=0.108 Sum_probs=61.9
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH--hcCEEEEcCCC-CCCcHHHHHHHHc-----CCc
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMRY-----GTI 568 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~--~aDi~v~PS~~-E~fgl~~lEAma~-----G~P 568 (662)
..+++++.+.+ .....+..+-.......+.... +.......+. ..|++++-... +.-|+.+++.+.. .+|
T Consensus 4 ~~~ilivdd~~-~~~~~l~~~l~~~~~~~v~~~~-~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ 81 (128)
T 1jbe_A 4 ELKFLVVDDFS-TMRRIVRNLLKELGFNNVEEAE-DGVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIRAXXAMSALP 81 (128)
T ss_dssp TCCEEEECSCH-HHHHHHHHHHHHTTCCCEEEES-SHHHHHHHHTTCCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCC
T ss_pred ccEEEEECCCH-HHHHHHHHHHHHcCCcEEEeeC-CHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCc
Confidence 45677777654 3333333332222221222222 3333323443 36888765543 4567888888764 567
Q ss_pred EEE-eCCccc---ccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 569 PVV-HATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 569 vVa-s~~gg~---~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
+|. |..... .+.+.. |..+++..|.+.+++.++|..++.
T Consensus 82 ii~~s~~~~~~~~~~~~~~----------ga~~~l~KP~~~~~l~~~i~~~~~ 124 (128)
T 1jbe_A 82 VLMVTAEAKKENIIAAAQA----------GASGYVVKPFTAATLEEKLNKIFE 124 (128)
T ss_dssp EEEEESSCCHHHHHHHHHT----------TCSEEEESSCCHHHHHHHHHHHHH
T ss_pred EEEEecCccHHHHHHHHHh----------CcCceeecCCCHHHHHHHHHHHHH
Confidence 766 333322 223333 678999999999999999987765
No 202
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=26.22 E-value=51 Score=31.15 Aligned_cols=33 Identities=21% Similarity=0.399 Sum_probs=25.6
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
||+++|+.- .||+| ..+++.|.++|++|.++..
T Consensus 2 ~k~vlITGa------s~gIG---~~ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 2 MKVAVITGA------SRGIG---EAIARALARDGYALALGAR 34 (235)
T ss_dssp CCEEEEESC------SSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECC------CcHHH---HHHHHHHHHCCCEEEEEeC
Confidence 778888752 47777 5688999999999888754
No 203
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=26.17 E-value=41 Score=32.79 Aligned_cols=34 Identities=32% Similarity=0.518 Sum_probs=25.9
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
..|+++|+.- .||+| ..+++.|+++|+.|.++..
T Consensus 24 ~~k~vlITGa------s~gIG---~~~a~~l~~~G~~v~~~~~ 57 (269)
T 3gk3_A 24 AKRVAFVTGG------MGGLG---AAISRRLHDAGMAVAVSHS 57 (269)
T ss_dssp CCCEEEETTT------TSHHH---HHHHHHHHTTTCEEEEEEC
T ss_pred cCCEEEEECC------CchHH---HHHHHHHHHCCCEEEEEcC
Confidence 3578888752 47777 5688999999999988763
No 204
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=26.15 E-value=73 Score=30.41 Aligned_cols=43 Identities=19% Similarity=0.254 Sum_probs=28.5
Q ss_pred CceeEEEEeecccCcc--ccCcHH-HHHhhHHHHHHhCCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYS--KTGGLG-DVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~--~~GG~~-~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.+|||++|... |.. ..++.. ..+..+++.|.+.||+|.++-..
T Consensus 24 ~M~kiLiI~gs--p~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL~ 69 (218)
T 3rpe_A 24 AMSNVLIINAM--KEFAHSKGALNLTLTNVAADFLRESGHQVKITTVD 69 (218)
T ss_dssp CCCCEEEEECC--CCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEGG
T ss_pred cCcceEEEEeC--CCcccCCChHHHHHHHHHHHHHhhCCCEEEEEECC
Confidence 35799999875 421 123444 34556667777899999998654
No 205
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=26.13 E-value=45 Score=33.60 Aligned_cols=33 Identities=39% Similarity=0.527 Sum_probs=25.3
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
+|||++|.. |.+|. .++..|++.||+|++++..
T Consensus 2 ~mkI~IiGa--------GaiG~---~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 2 SLNILVIGT--------GAIGS---FYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp -CEEEEESC--------CHHHH---HHHHHHHHTTCEEEEECST
T ss_pred CCEEEEECc--------CHHHH---HHHHHHHhCCCeEEEEeCC
Confidence 489998863 66774 5778899999999998643
No 206
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=25.85 E-value=2.8e+02 Score=22.78 Aligned_cols=63 Identities=11% Similarity=0.231 Sum_probs=40.8
Q ss_pred hcCEEEEcCCCCCCcHHHHHHHHc---CCcEEEe-CCccc---ccccccccccccCCCCccceEEECCC-CHHHHHHHHH
Q 006091 542 GCDILLMPSRFEPCGLNQLYAMRY---GTIPVVH-ATGGL---RDTVENFNPFAREGSGEGTGWSFLPL-SEESMLTALR 613 (662)
Q Consensus 542 ~aDi~v~PS~~E~fgl~~lEAma~---G~PvVas-~~gg~---~eii~~~~~~~~~~~~~~~G~l~~~~-d~~~la~aI~ 613 (662)
..|++++| +.-|+.+++.+.. .+|+|.- ..... .+.+.. |..+++..|. +.+++..+|.
T Consensus 62 ~~dlvi~~---~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~----------g~~~~l~kP~~~~~~l~~~i~ 128 (137)
T 2pln_A 62 NYDLVMVS---DKNALSFVSRIKEKHSSIVVLVSSDNPTSEEEVHAFEQ----------GADDYIAKPYRSIKALVARIE 128 (137)
T ss_dssp CCSEEEEC---STTHHHHHHHHHHHSTTSEEEEEESSCCHHHHHHHHHT----------TCSEEEESSCSCHHHHHHHHH
T ss_pred CCCEEEEc---CccHHHHHHHHHhcCCCccEEEEeCCCCHHHHHHHHHc----------CCceeeeCCCCCHHHHHHHHH
Confidence 35777733 3446666666653 6777773 33322 222333 6789999999 9999999998
Q ss_pred HHHH
Q 006091 614 FAIR 617 (662)
Q Consensus 614 ~~l~ 617 (662)
.++.
T Consensus 129 ~~~~ 132 (137)
T 2pln_A 129 ARLR 132 (137)
T ss_dssp HHTC
T ss_pred HHHh
Confidence 7764
No 207
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=25.81 E-value=71 Score=29.14 Aligned_cols=41 Identities=24% Similarity=0.231 Sum_probs=28.2
Q ss_pred cccCCceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 146 AQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 146 ~~~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
++...+|||++=+.. +|.+. -..+...|.++||+|.=+.+.
T Consensus 16 ~~~~~~MkIaIgsDh-------aG~~l-K~~i~~~L~~~G~eV~D~G~~ 56 (166)
T 3s5p_A 16 TQGPGSMKVAFASDH-------GGRDL-RMFLQQRASAHGYEVMDLGTE 56 (166)
T ss_dssp ---CTTCEEEEEECG-------GGHHH-HHHHHHHHHHTTCEEEEEEC-
T ss_pred CCCCCceEEEEEECc-------hHHHH-HHHHHHHHHHCCCEEEEcCCC
Confidence 344566999988763 55553 467788899999999888654
No 208
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=25.80 E-value=61 Score=26.40 Aligned_cols=33 Identities=24% Similarity=0.371 Sum_probs=22.7
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCC-CcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG-HRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~G-heV~Vit~~ 194 (662)
.|||+++. .|++| ..+++.|.+.| ++|.++...
T Consensus 5 ~~~v~I~G--------~G~iG---~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVG--------AGKIG---QMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEEC--------CSHHH---HHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEEC--------CCHHH---HHHHHHHHhCCCceEEEEeCC
Confidence 46777653 14455 56788899999 998887543
No 209
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=25.79 E-value=75 Score=31.54 Aligned_cols=41 Identities=22% Similarity=0.485 Sum_probs=31.2
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.++||+.|+.. .| .-|-.+.+.+||..|++.|..|.+|-..
T Consensus 90 ~~~kvI~vts~-kg---G~GKTtva~nLA~~lA~~G~rVLLID~D 130 (286)
T 3la6_A 90 AQNNVLMMTGV-SP---SIGMTFVCANLAAVISQTNKRVLLIDCD 130 (286)
T ss_dssp TTCCEEEEEES-SS---SSSHHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred CCCeEEEEECC-CC---CCcHHHHHHHHHHHHHhCCCCEEEEecc
Confidence 45677777763 22 2466778899999999999999999654
No 210
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=25.75 E-value=41 Score=32.45 Aligned_cols=41 Identities=20% Similarity=0.200 Sum_probs=27.0
Q ss_pred ccccCCceeEEEEeecccCccccCcHHHHHhhHHHHHHhCC---CcEEEEeec
Q 006091 145 KAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG---HRVMVVSPR 194 (662)
Q Consensus 145 ~~~~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~G---heV~Vit~~ 194 (662)
+......||.++|+.- +||+| ..+++.|.++| +.|.++...
T Consensus 14 ~~~~~~~~k~vlITGa------sggIG---~~la~~L~~~G~~~~~V~~~~r~ 57 (267)
T 1sny_A 14 LVPRGSHMNSILITGC------NRGLG---LGLVKALLNLPQPPQHLFTTCRN 57 (267)
T ss_dssp ------CCSEEEESCC------SSHHH---HHHHHHHHTSSSCCSEEEEEESC
T ss_pred ccccCCCCCEEEEECC------CCcHH---HHHHHHHHhcCCCCcEEEEEecC
Confidence 3334456778888742 47777 56889999999 999888654
No 211
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=25.68 E-value=40 Score=33.27 Aligned_cols=39 Identities=13% Similarity=0.145 Sum_probs=26.9
Q ss_pred ceeEEEEeecccCccccCcHHH---HHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGD---VCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~---~~~~La~~L~~~GheV~Vit~~ 194 (662)
+|||+++.....+ .-.. ....++++|.++||+|.++.+.
T Consensus 2 ~~~i~il~gg~s~-----e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSA-----EREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSST-----THHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCc-----cceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 4889998742111 1112 3467999999999999998654
No 212
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=25.64 E-value=59 Score=30.19 Aligned_cols=41 Identities=7% Similarity=0.135 Sum_probs=27.8
Q ss_pred ceeEEEEeecccCc-cccCcHHHHHhhHHHHHHhCC--CcEEEEee
Q 006091 151 SYNIVFVTAEAAPY-SKTGGLGDVCGSLPVALAARG--HRVMVVSP 193 (662)
Q Consensus 151 ~MkIl~vs~~~~P~-~~~GG~~~~~~~La~~L~~~G--heV~Vit~ 193 (662)
+|||++|... |. ...|-....+..+++.|.+.| ++|.++-.
T Consensus 1 M~kilii~gS--~r~~~~s~t~~la~~~~~~~~~~g~~~~v~~~dL 44 (208)
T 2hpv_A 1 MSKLLVVKAH--PLTKEESRSVRALETFLASYRETNPSDEIEILDV 44 (208)
T ss_dssp -CEEEEEECC--SSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEET
T ss_pred CCeEEEEEec--CCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEeeC
Confidence 3799999875 42 012334556677888888887 99999853
No 213
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=25.35 E-value=57 Score=29.67 Aligned_cols=33 Identities=24% Similarity=0.211 Sum_probs=24.0
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|+|+++.. +|++| ..+++.|.++||+|.+++..
T Consensus 4 ~~ilVtGa-------tG~iG---~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIFGA-------TGQTG---LTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CEEEEEST-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcC-------CcHHH---HHHHHHHHHCCCeEEEEEeC
Confidence 67765532 36666 56788899999999998754
No 214
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=25.23 E-value=2.8e+02 Score=22.73 Aligned_cols=65 Identities=17% Similarity=0.165 Sum_probs=44.3
Q ss_pred cCEEEEcCCC-CCCcHHHHHHHHc----CCcEEE-eCCcccc---cccccccccccCCCCccceEEECCCCHHHHHHHHH
Q 006091 543 CDILLMPSRF-EPCGLNQLYAMRY----GTIPVV-HATGGLR---DTVENFNPFAREGSGEGTGWSFLPLSEESMLTALR 613 (662)
Q Consensus 543 aDi~v~PS~~-E~fgl~~lEAma~----G~PvVa-s~~gg~~---eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~ 613 (662)
.|++++=-.. +.-|+.+++.+.. .+|+|. |...... +.+.. |..+++..|.+.+++.++|.
T Consensus 53 ~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~~~~~~~~~~~~~~----------ga~~~l~KP~~~~~L~~~l~ 122 (133)
T 2r25_B 53 YNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVALTAFADDSNIKECLES----------GMNGFLSKPIKRPKLKTILT 122 (133)
T ss_dssp CSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEEESCCSHHHHHHHHHT----------TCSEEEESSCCHHHHHHHHH
T ss_pred CCEEEEeCCCCCCChHHHHHHHHhhcCCCCCEEEEECCCCHHHHHHHHHc----------CCCEEEeCCCCHHHHHHHHH
Confidence 5888876543 3467888877753 467776 4433322 22333 67899999999999999998
Q ss_pred HHHH
Q 006091 614 FAIR 617 (662)
Q Consensus 614 ~~l~ 617 (662)
.++.
T Consensus 123 ~~~~ 126 (133)
T 2r25_B 123 EFCA 126 (133)
T ss_dssp HHCT
T ss_pred HHHH
Confidence 7764
No 215
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=25.21 E-value=89 Score=30.26 Aligned_cols=40 Identities=18% Similarity=0.313 Sum_probs=32.3
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
++||.+||+..- + .-|-..++..|+++|+++|..|..+=|
T Consensus 19 ~m~k~i~ItgT~-t---~vGKT~vs~gL~~~L~~~G~~V~~fKP 58 (242)
T 3qxc_A 19 FQGHMLFISATN-T---NAGKTTCARLLAQYCNACGVKTILLKP 58 (242)
T ss_dssp CCCEEEEEEESS-T---TSSHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred hcCcEEEEEeCC-C---CCcHHHHHHHHHHHHHhCCCceEEEee
Confidence 468999999752 2 356777999999999999999999844
No 216
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=25.02 E-value=56 Score=32.67 Aligned_cols=34 Identities=26% Similarity=0.373 Sum_probs=24.6
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.|||++... +|++| ..+++.|.++||+|.+++..
T Consensus 13 ~M~ilVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 13 HVKYAVLGA-------TGLLG---HHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCEEEEEST-------TSHHH---HHHHHHHHHTTCEEEEEECT
T ss_pred CCEEEEECC-------CcHHH---HHHHHHHHHCCCEEEEEecC
Confidence 477765532 36666 55788899999999998754
No 217
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=24.89 E-value=76 Score=30.14 Aligned_cols=36 Identities=14% Similarity=0.091 Sum_probs=27.3
Q ss_pred ceeEEEEeecccCccccCc-HHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGG-LGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG-~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
++||++-.. |+ ...+..+|.+.|.+.|++|.|+.+.
T Consensus 4 ~k~IllgvT--------Gaiaa~k~~~ll~~L~~~g~eV~vv~T~ 40 (209)
T 3zqu_A 4 PERITLAMT--------GASGAQYGLRLLDCLVQEEREVHFLISK 40 (209)
T ss_dssp CSEEEEEEC--------SSSCHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred CCEEEEEEE--------CHHHHHHHHHHHHHHHHCCCEEEEEECc
Confidence 367776653 44 3456789999999999999999754
No 218
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=24.83 E-value=47 Score=32.91 Aligned_cols=32 Identities=25% Similarity=0.493 Sum_probs=24.1
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
+|||++|.. |.+| ..++..|.+.||+|+++..
T Consensus 3 ~m~i~iiG~--------G~~G---~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGA--------GAMG---SRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECc--------CHHH---HHHHHHHHhCCCcEEEEEC
Confidence 589998852 5555 5578889999999999853
No 219
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=24.82 E-value=48 Score=33.60 Aligned_cols=33 Identities=18% Similarity=0.338 Sum_probs=25.5
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
.+|||++|.. |.+| ..++..|.+.||+|+++..
T Consensus 13 ~~~kI~iIG~--------G~mG---~ala~~L~~~G~~V~~~~r 45 (335)
T 1z82_A 13 MEMRFFVLGA--------GSWG---TVFAQMLHENGEEVILWAR 45 (335)
T ss_dssp -CCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECS
T ss_pred cCCcEEEECc--------CHHH---HHHHHHHHhCCCeEEEEeC
Confidence 5799999863 5555 5678889999999999854
No 220
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=24.80 E-value=45 Score=33.57 Aligned_cols=37 Identities=27% Similarity=0.329 Sum_probs=23.3
Q ss_pred cCCceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 148 ~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
..+.|+|++... +|++| ..+++.|.++||+|.++...
T Consensus 16 ~~~~~~vlVtGa-------tG~iG---~~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 16 PRGSHMILVTGS-------AGRVG---RAVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp -----CEEEETT-------TSHHH---HHHHHHHHHTTCCEEEEESS
T ss_pred ccCCCEEEEECC-------CChHH---HHHHHHHHhCCCEEEEEeCC
Confidence 345677765532 46666 56788999999999998644
No 221
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=24.76 E-value=64 Score=30.02 Aligned_cols=39 Identities=13% Similarity=0.149 Sum_probs=30.7
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.|||+++-. ..+|....++..++..|.+.|++|.++...
T Consensus 21 ~~kv~IvY~-----S~tGnTe~~A~~ia~~l~~~g~~v~v~~l~ 59 (191)
T 1bvy_F 21 NTPLLVLYG-----SNMGTAEGTARDLADIAMSKGFAPQVATLD 59 (191)
T ss_dssp CCCEEEEEE-----CSSSHHHHHHHHHHHHHHTTTCCCEEEEGG
T ss_pred CCeEEEEEE-----CCChHHHHHHHHHHHHHHhCCCceEEeeHH
Confidence 466766643 126999999999999999999999997644
No 222
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=24.60 E-value=46 Score=34.12 Aligned_cols=30 Identities=27% Similarity=0.410 Sum_probs=22.6
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEE
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVV 191 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vi 191 (662)
.|||++|.. .| .| ..+|..|+++|++|+|+
T Consensus 1 sm~V~IVGa--Gp----aG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 1 SMHVGIIGA--GI----GG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CCEEEEECC--SH----HH-----HHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECc--CH----HH-----HHHHHHHHhCCCCEEEE
Confidence 389999963 12 22 44778899999999998
No 223
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=24.52 E-value=52 Score=35.18 Aligned_cols=40 Identities=15% Similarity=0.221 Sum_probs=31.4
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhC--CCcEEEEeecC
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR--GHRVMVVSPRY 195 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~--GheV~Vit~~~ 195 (662)
+++||+++.. | ..|=-.=+.+||+.|+++ ||+|+++++..
T Consensus 8 ~~~~vv~~p~---p---~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~ 49 (463)
T 2acv_A 8 KNSELIFIPA---P---GIGHLASALEFAKLLTNHDKNLYITVFCIKF 49 (463)
T ss_dssp HCEEEEEECC---S---STTTHHHHHHHHHHHHHTCTTEEEEEEECCC
T ss_pred CCCEEEEEcC---c---ccchHHHHHHHHHHHHhcCCCcEEEEEEcCC
Confidence 3589998863 4 355556678999999999 99999998764
No 224
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=24.40 E-value=46 Score=34.33 Aligned_cols=34 Identities=29% Similarity=0.418 Sum_probs=26.1
Q ss_pred CCceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 149 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
..+|||++|.. |.+| ..++..|++.||+|.++..
T Consensus 27 ~~~mkI~VIGa--------G~mG---~alA~~La~~G~~V~l~~r 60 (356)
T 3k96_A 27 PFKHPIAILGA--------GSWG---TALALVLARKGQKVRLWSY 60 (356)
T ss_dssp CCCSCEEEECC--------SHHH---HHHHHHHHTTTCCEEEECS
T ss_pred ccCCeEEEECc--------cHHH---HHHHHHHHHCCCeEEEEeC
Confidence 34689999863 5455 4588899999999999854
No 225
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=24.24 E-value=2.9e+02 Score=22.54 Aligned_cols=108 Identities=9% Similarity=0.074 Sum_probs=60.8
Q ss_pred eEEEEEeCCChhhHHHHHH-HHhhcCCcEEEEcCCChHHHHHHHH--hcCEEEEcCCC-CCCcHHHHHHHHc---CCcEE
Q 006091 498 IQFVMLGSGDPQFESWMRD-TEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMRY---GTIPV 570 (662)
Q Consensus 498 ~~lvivG~g~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~ll~--~aDi~v~PS~~-E~fgl~~lEAma~---G~PvV 570 (662)
.+++++.+.+ .....+.. +........+.... +.......+. ..|++++--.. +.-|+.+++.+.. .+|+|
T Consensus 4 ~~Ilivdd~~-~~~~~l~~~l~~~~~~~~v~~~~-~~~~al~~~~~~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii 81 (133)
T 3b2n_A 4 TSLIIAEDQN-MLRQAMVQLIKLHGDFEILADTD-NGLDAMKLIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVI 81 (133)
T ss_dssp EEEEEECSCH-HHHHHHHHHHHHHSSEEEEEEES-CHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEE
T ss_pred eEEEEECCCH-HHHHHHHHHHhhCCCcEEEEEcC-CHHHHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEE
Confidence 3566666653 33333333 33222112222222 3333333433 46888876554 3457777777753 56777
Q ss_pred E-eCCccc---ccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 571 V-HATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 571 a-s~~gg~---~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
. |..... .+.+.. |..+++..|.+.+++.++|..++.
T Consensus 82 ~ls~~~~~~~~~~~~~~----------ga~~~l~Kp~~~~~L~~~i~~~~~ 122 (133)
T 3b2n_A 82 IVTTFKRPGYFEKAVVN----------DVDAYVLKERSIEELVETINKVNN 122 (133)
T ss_dssp EEESCCCHHHHHHHHHT----------TCSEEEETTSCHHHHHHHHHHHHC
T ss_pred EEecCCCHHHHHHHHHc----------CCcEEEECCCCHHHHHHHHHHHHc
Confidence 6 433322 223333 778999999999999999987764
No 226
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=23.96 E-value=4e+02 Score=23.98 Aligned_cols=108 Identities=15% Similarity=0.171 Sum_probs=60.8
Q ss_pred eEEEEEeCCChhhHHHHHHHHhhcC-CcEEEEcCCChHHHHHHHH--hcCEEEEcCCC-CCCcHHHHHHHHc---CCcEE
Q 006091 498 IQFVMLGSGDPQFESWMRDTEATYK-DKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMRY---GTIPV 570 (662)
Q Consensus 498 ~~lvivG~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~ll~--~aDi~v~PS~~-E~fgl~~lEAma~---G~PvV 570 (662)
.+++++.+.+ .....+..+-.... ..++.... +.......+. ..|++++--.. +.-|+.+++.+.. .+|+|
T Consensus 6 ~~ilivdd~~-~~~~~l~~~L~~~~~~~vv~~~~-~~~~al~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii 83 (215)
T 1a04_A 6 ATILLIDDHP-MLRTGVKQLISMAPDITVVGEAS-NGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIV 83 (215)
T ss_dssp EEEEEECSCH-HHHHHHHHHHTTCTTEEEEEEES-SHHHHHHHHHHHCCSEEEEETTSTTSCHHHHHHHHHHSCCCSEEE
T ss_pred eEEEEECCCH-HHHHHHHHHHhcCCCcEEEEEeC-CHHHHHHHHHhcCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEE
Confidence 5666776653 33333333322221 12222222 3333323333 46888875543 4567888777754 46666
Q ss_pred E-eCCcccc---cccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 571 V-HATGGLR---DTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 571 a-s~~gg~~---eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
. |...... +.+.. |..|++..|.+++++.++|..++.
T Consensus 84 ~ls~~~~~~~~~~~~~~----------Ga~~~l~Kp~~~~~L~~~i~~~~~ 124 (215)
T 1a04_A 84 VFSVSNHEEDVVTALKR----------GADGYLLKDMEPEDLLKALHQAAA 124 (215)
T ss_dssp EEECCCCHHHHHHHHHT----------TCSEEEETTCCHHHHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHc----------CCcEEEeCCCCHHHHHHHHHHHHc
Confidence 6 3333222 22333 678999999999999999998875
No 227
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=23.83 E-value=51 Score=33.05 Aligned_cols=33 Identities=33% Similarity=0.381 Sum_probs=24.5
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.|||++|.. |.+|.. ++..|++.||+|++++..
T Consensus 2 ~mkI~IiGa--------GaiG~~---~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 2 SLRIAIVGA--------GALGLY---YGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp --CEEEECC--------STTHHH---HHHHHHHTSCCEEEECST
T ss_pred CCEEEEECc--------CHHHHH---HHHHHHHCCCeEEEEEcC
Confidence 489999863 777754 678899999999998643
No 228
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=23.60 E-value=4.2e+02 Score=24.10 Aligned_cols=112 Identities=10% Similarity=0.104 Sum_probs=63.4
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH--hcCEEEEcCCC-CCCcHHHHHHHH---cCCcEE
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMR---YGTIPV 570 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~--~aDi~v~PS~~-E~fgl~~lEAma---~G~PvV 570 (662)
..+++++.+.+ .....+..+-......+. .. .+.......+. ..|++++-... +.-|+.+++.+. ..+|+|
T Consensus 7 ~~~ilivdd~~-~~~~~l~~~L~~~g~~v~-~~-~~~~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii 83 (233)
T 1ys7_A 7 SPRVLVVDDDS-DVLASLERGLRLSGFEVA-TA-VDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83 (233)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHHTTCEEE-EE-SSHHHHHHHHHHSCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEE
T ss_pred CCeEEEEeCCH-HHHHHHHHHHHhCCCEEE-EE-CCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEE
Confidence 45677777764 333333332222223333 22 13333333443 46888776543 456778877775 367887
Q ss_pred Ee-CCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHH
Q 006091 571 VH-ATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 618 (662)
Q Consensus 571 as-~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~ 618 (662)
.- ..........-+ ..|..+++..|.+.+++..+|..++..
T Consensus 84 ~lt~~~~~~~~~~~~-------~~ga~~~l~Kp~~~~~L~~~i~~~~~~ 125 (233)
T 1ys7_A 84 VLSARSSVDDRVAGL-------EAGADDYLVKPFVLAELVARVKALLRR 125 (233)
T ss_dssp EEECCCTTTCCCTTT-------TTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred EEEcCCCHHHHHHHH-------HcCCCEEEeCCCCHHHHHHHHHHHHhh
Confidence 73 333222222111 127789999999999999999988764
No 229
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=23.56 E-value=3.2e+02 Score=22.70 Aligned_cols=66 Identities=12% Similarity=0.187 Sum_probs=42.9
Q ss_pred hcCEEEEcCCC-CCCcHHHHHHHH---cCCcEEEe-CCccc---ccccccccccccCCCCccceEEECCCCHHHHHHHHH
Q 006091 542 GCDILLMPSRF-EPCGLNQLYAMR---YGTIPVVH-ATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALR 613 (662)
Q Consensus 542 ~aDi~v~PS~~-E~fgl~~lEAma---~G~PvVas-~~gg~---~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~ 613 (662)
..|++++-... +.-|+.+++.+. ..+|+|.- ..... .+.+.. |..+++..|.+.+++.++|.
T Consensus 49 ~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~----------ga~~~l~KP~~~~~L~~~i~ 118 (141)
T 3cu5_A 49 PPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSGYSDKEYLKAAIKF----------RAIRYVEKPIDPSEIMDALK 118 (141)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECCSTTTCCC----------------CCCEEECSSCCHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeCCCcHHHHHHHHhC----------CccEEEeCCCCHHHHHHHHH
Confidence 46888865543 346777777765 36777764 33222 222333 67899999999999999998
Q ss_pred HHHH
Q 006091 614 FAIR 617 (662)
Q Consensus 614 ~~l~ 617 (662)
.++.
T Consensus 119 ~~~~ 122 (141)
T 3cu5_A 119 QSIQ 122 (141)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8775
No 230
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=23.31 E-value=3.1e+02 Score=22.49 Aligned_cols=67 Identities=9% Similarity=0.184 Sum_probs=44.9
Q ss_pred hcCEEEEcCCC-C--CCcHHHHHHHHc---CCcEEE-eCCccc---ccccccccccccCCCCccceEEECCCCHHHHHHH
Q 006091 542 GCDILLMPSRF-E--PCGLNQLYAMRY---GTIPVV-HATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTA 611 (662)
Q Consensus 542 ~aDi~v~PS~~-E--~fgl~~lEAma~---G~PvVa-s~~gg~---~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~a 611 (662)
..|++++-... + .-|+.+++.+.. .+|+|. |..... .+.+.. |..+++..|.+.+++.++
T Consensus 50 ~~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~----------ga~~~l~KP~~~~~l~~~ 119 (136)
T 3kto_A 50 DAIGMIIEAHLEDKKDSGIELLETLVKRGFHLPTIVMASSSDIPTAVRAMRA----------SAADFIEKPFIEHVLVHD 119 (136)
T ss_dssp TEEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCEEEEESSCCHHHHHHHHHT----------TCSEEEESSBCHHHHHHH
T ss_pred CCCEEEEeCcCCCCCccHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHc----------ChHHheeCCCCHHHHHHH
Confidence 35777765543 4 456777766654 677776 333322 223333 778999999999999999
Q ss_pred HHHHHHH
Q 006091 612 LRFAIRT 618 (662)
Q Consensus 612 I~~~l~~ 618 (662)
|..++..
T Consensus 120 i~~~~~~ 126 (136)
T 3kto_A 120 VQQIING 126 (136)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9988763
No 231
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=23.17 E-value=59 Score=35.19 Aligned_cols=34 Identities=21% Similarity=0.423 Sum_probs=25.5
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
+|||++... +|.+| ..|++.|.++||+|.+++-.
T Consensus 147 ~m~VLVTGa-------tG~IG---~~l~~~L~~~G~~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAITGS-------RGLVG---RALTAQLQTGGHEVIQLVRK 180 (516)
T ss_dssp CCEEEEEST-------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECC-------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 688876542 36666 56788999999999998755
No 232
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=22.93 E-value=44 Score=33.20 Aligned_cols=33 Identities=12% Similarity=0.320 Sum_probs=25.7
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.|||++|.. |.+|. .++..|++.||+|++++..
T Consensus 2 ~mkI~iiGa--------Ga~G~---~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIGP--------GAVGT---TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp -CCEEEECC--------SHHHH---HHHHHHHHHCTTCEEEESS
T ss_pred CcEEEEECC--------CHHHH---HHHHHHHHCCCeEEEEEec
Confidence 489999863 77775 5778888999999998754
No 233
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=22.93 E-value=29 Score=33.62 Aligned_cols=33 Identities=18% Similarity=0.232 Sum_probs=25.1
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
..|||.+|.. |-+| ..|+..|.+.||+|.++..
T Consensus 5 ~~mkI~IIG~--------G~~G---~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDD--------GSST---VNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCEEEEECC--------SCCC---SCHHHHHHHTTCEEEECSS
T ss_pred CCcEEEEEee--------CHHH---HHHHHHHHHCCCEEEEecC
Confidence 4599999863 3333 6799999999999988743
No 234
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=22.86 E-value=61 Score=30.10 Aligned_cols=38 Identities=16% Similarity=0.315 Sum_probs=24.7
Q ss_pred eeEEEEeecccCccccCcH-HHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGL-GDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~-~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||++|... |. .++. ...+..+++.| +.|++|.++-..
T Consensus 1 MkiLiI~gs--pr--~~s~t~~l~~~~~~~~-~~g~~v~~~dL~ 39 (196)
T 3lcm_A 1 MKILIVYTH--PN--PTSFNAEILKQVQTNL-SKEHTVSTLDLY 39 (196)
T ss_dssp CEEEEEECC--SC--TTSHHHHHHHHHHHHS-CTTSEEEEEETT
T ss_pred CEEEEEEeC--CC--CCChHHHHHHHHHHHh-cCCCeEEEEEcc
Confidence 899999975 53 2443 33444445555 679999998643
No 235
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=22.85 E-value=84 Score=30.87 Aligned_cols=37 Identities=30% Similarity=0.442 Sum_probs=27.8
Q ss_pred eeEEEEeecccCccccCcHH--HHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~--~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||+.|+.. .||+| +.+.+||.+|+++|+.|.+|-..
T Consensus 4 ~kvI~v~s~------KGGvGKTT~a~nLA~~La~~G~~VlliD~D 42 (286)
T 2xj4_A 4 TRVIVVGNE------KGGAGKSTIAVHLVTALLYGGAKVAVIDLD 42 (286)
T ss_dssp CEEEEECCS------SSCTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEcC------CCCCCHHHHHHHHHHHHHHCCCcEEEEECC
Confidence 466666542 35554 58899999999999999998544
No 236
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=22.83 E-value=82 Score=31.15 Aligned_cols=34 Identities=15% Similarity=0.100 Sum_probs=25.0
Q ss_pred eeEEEEeecccCccccC--cHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTG--GLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~G--G~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.|+++|+.- .| |+|. .+++.|+++|++|.++...
T Consensus 30 ~k~vlVTGa------sg~~GIG~---~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 30 GKKGVIIGV------ANDKSLAW---GIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp TCEEEEECC------CSTTSHHH---HHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEeC------CCCCCHHH---HHHHHHHHCCCEEEEEeCC
Confidence 468888752 33 7774 5889999999998887543
No 237
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=22.79 E-value=61 Score=32.47 Aligned_cols=32 Identities=31% Similarity=0.330 Sum_probs=25.0
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
+|||++|.. |.+|. .++..|+ .||+|++++..
T Consensus 2 ~mkI~IiGa--------Ga~G~---~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGG--------GSVGL---LCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CCEEEEECC--------SHHHH---HHHHHHH-TTSEEEEECSC
T ss_pred CCEEEEECC--------CHHHH---HHHHHHh-cCCceEEEECC
Confidence 589999863 77775 5677888 99999998643
No 238
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=22.57 E-value=60 Score=30.67 Aligned_cols=32 Identities=9% Similarity=0.159 Sum_probs=24.8
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEe
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit 192 (662)
.+|||++|. .|.+-..++..|.+.||+|.++.
T Consensus 22 ~mmkI~IIG-----------~G~mG~~la~~l~~~g~~V~~v~ 53 (220)
T 4huj_A 22 SMTTYAIIG-----------AGAIGSALAERFTAAQIPAIIAN 53 (220)
T ss_dssp GSCCEEEEE-----------CHHHHHHHHHHHHHTTCCEEEEC
T ss_pred cCCEEEEEC-----------CCHHHHHHHHHHHhCCCEEEEEE
Confidence 358999886 34445678999999999999854
No 239
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=22.38 E-value=61 Score=31.91 Aligned_cols=33 Identities=30% Similarity=0.339 Sum_probs=23.4
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||++... +|++| ..+++.|.++||+|.++...
T Consensus 1 m~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 33 (312)
T 3ko8_A 1 MRIVVTGG-------AGFIG---SHLVDKLVELGYEVVVVDNL 33 (312)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEECCC
T ss_pred CEEEEECC-------CChHH---HHHHHHHHhCCCEEEEEeCC
Confidence 67664432 36666 56788999999999988643
No 240
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=22.22 E-value=3.5e+02 Score=22.71 Aligned_cols=107 Identities=8% Similarity=0.070 Sum_probs=61.0
Q ss_pred eEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH--hcCEEEEcCCC-CCCcHHHHHHHH---cCCcEEE
Q 006091 498 IQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMR---YGTIPVV 571 (662)
Q Consensus 498 ~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~--~aDi~v~PS~~-E~fgl~~lEAma---~G~PvVa 571 (662)
.+++++.+.+.....+...+. .....+.... +.......+. ..|++++-... +.-|+.+++.+. ..+|+|+
T Consensus 4 ~~ILivdd~~~~~~~l~~~L~-~~g~~v~~~~--~~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ 80 (155)
T 1qkk_A 4 PSVFLIDDDRDLRKAMQQTLE-LAGFTVSSFA--SATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMIL 80 (155)
T ss_dssp CEEEEECSCHHHHHHHHHHHH-HTTCEEEEES--CHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEE
T ss_pred CEEEEEeCCHHHHHHHHHHHH-HcCcEEEEEC--CHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEE
Confidence 466777666432333333333 2233333221 3333323332 46888776543 445777776664 3678877
Q ss_pred e-CCccc---ccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 572 H-ATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 572 s-~~gg~---~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
. ..... .+.+.. |..+++..|.+.+++..+|..++.
T Consensus 81 ls~~~~~~~~~~~~~~----------g~~~~l~kP~~~~~L~~~i~~~~~ 120 (155)
T 1qkk_A 81 VTGHGDIPMAVQAIQD----------GAYDFIAKPFAADRLVQSARRAEE 120 (155)
T ss_dssp EECGGGHHHHHHHHHT----------TCCEEEESSCCHHHHHHHHHHHHH
T ss_pred EECCCChHHHHHHHhc----------CCCeEEeCCCCHHHHHHHHHHHHH
Confidence 4 33321 223333 678999999999999999998876
No 241
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=22.21 E-value=74 Score=32.18 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=26.0
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
+|||.||. .||.+ +..+|+.|.++||+|.+.=.
T Consensus 4 ~~~i~~iG--------iGg~G--ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 4 MKHIHIIG--------IGGTF--MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCEEEEES--------CCSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEEE--------ECHHH--HHHHHHHHHhCCCEEEEEcC
Confidence 57888886 48888 44678899999999999743
No 242
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=22.14 E-value=77 Score=31.15 Aligned_cols=40 Identities=13% Similarity=0.068 Sum_probs=27.7
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||++++...... .... .....++.++.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~-~~~~--~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANI-NIKK--DSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGC-CTTT--CHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhC-CcCC--ChHHHHHHHHHHCCCEEEEEchh
Confidence 6999998643221 1122 23457999999999999999754
No 243
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=22.13 E-value=76 Score=29.83 Aligned_cols=42 Identities=10% Similarity=0.124 Sum_probs=28.4
Q ss_pred ceeEEEEeecccCccccCcH-HHHHhhHHHHHHhC--CCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGL-GDVCGSLPVALAAR--GHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~-~~~~~~La~~L~~~--GheV~Vit~~ 194 (662)
+|||++|... |....++. ...+..+...|.+. |++|.++-..
T Consensus 4 M~kiLiI~gS--pr~~~~S~s~~l~~~~~~~~~~~~~g~ev~~~dL~ 48 (211)
T 3p0r_A 4 MTKVLFVKAN--NRPAEQAVSVKLYEAFLASYKEAHPNDTVVELDLY 48 (211)
T ss_dssp CCEEEEEECC--CSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEEGG
T ss_pred cCEEEEEEeC--CCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 5899999976 42112444 44556677777776 8999998643
No 244
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=22.06 E-value=48 Score=28.73 Aligned_cols=34 Identities=21% Similarity=0.260 Sum_probs=25.8
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
...+|+++. .|.+-..+++.|.+.||+|.++...
T Consensus 6 ~~~~viIiG-----------~G~~G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 6 ICNHALLVG-----------YGRVGSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CCSCEEEEC-----------CSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCCEEEEC-----------cCHHHHHHHHHHHHCCCCEEEEECC
Confidence 345677664 3556678899999999999999754
No 245
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=22.04 E-value=66 Score=35.52 Aligned_cols=41 Identities=24% Similarity=0.296 Sum_probs=31.4
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecC
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 195 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~ 195 (662)
.++||++++.. + .-|-.+.+.+||..|+++|+.|.+|....
T Consensus 6 ~~~~i~~~sgk--G---GvGKTT~a~~lA~~lA~~G~rVLlvd~D~ 46 (589)
T 1ihu_A 6 NIPPYLFFTGK--G---GVGKTSISCATAIRLAEQGKRVLLVSTDP 46 (589)
T ss_dssp SCCSEEEEECS--T---TSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCEEEEEeCC--C---cCHHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 45789988853 2 23444688899999999999999998763
No 246
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=21.96 E-value=59 Score=31.73 Aligned_cols=32 Identities=28% Similarity=0.314 Sum_probs=24.1
Q ss_pred eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|||++|.. |.+| ..++..|.+.||+|+++...
T Consensus 1 m~i~iiG~--------G~~G---~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGC--------GALG---QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECc--------CHHH---HHHHHHHHhCCCCEEEEEcC
Confidence 78888752 4455 56888999999999998543
No 247
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=21.73 E-value=69 Score=30.96 Aligned_cols=25 Identities=28% Similarity=0.491 Sum_probs=21.0
Q ss_pred cCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 167 TGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 167 ~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
+|++| ..+|++|.++|++|++++..
T Consensus 28 SG~mG---~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 28 TGHLG---KIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp CCHHH---HHHHHHHHHTTCEEEEEECT
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 56677 56899999999999999865
No 248
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=21.65 E-value=60 Score=32.32 Aligned_cols=32 Identities=13% Similarity=0.180 Sum_probs=24.4
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEe
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit 192 (662)
..|||++|.. |-++ ..++..|++.||+|.++.
T Consensus 6 ~~~~I~iIG~--------G~mG---~~~a~~l~~~G~~V~~~d 37 (303)
T 3g0o_A 6 TDFHVGIVGL--------GSMG---MGAARSCLRAGLSTWGAD 37 (303)
T ss_dssp -CCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEEC
T ss_pred CCCeEEEECC--------CHHH---HHHHHHHHHCCCeEEEEE
Confidence 4689999852 4444 568899999999999874
No 249
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=21.56 E-value=63 Score=29.54 Aligned_cols=34 Identities=21% Similarity=0.401 Sum_probs=23.3
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
++|||++... +||+| ..+++.|. +|++|.++...
T Consensus 2 ~kM~vlVtGa-------sg~iG---~~~~~~l~-~g~~V~~~~r~ 35 (202)
T 3d7l_A 2 NAMKILLIGA-------SGTLG---SAVKERLE-KKAEVITAGRH 35 (202)
T ss_dssp CSCEEEEETT-------TSHHH---HHHHHHHT-TTSEEEEEESS
T ss_pred CCcEEEEEcC-------CcHHH---HHHHHHHH-CCCeEEEEecC
Confidence 3578654432 46777 55788888 99999887543
No 250
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=21.47 E-value=67 Score=32.16 Aligned_cols=33 Identities=18% Similarity=0.269 Sum_probs=25.1
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
.+|||++|.. |-+ =..++..|++.||+|.++..
T Consensus 20 ~m~~I~iIG~--------G~m---G~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 20 HMMEVGFLGL--------GIM---GKAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CSCEEEEECC--------SHH---HHHHHHHHHHTTCEEEEECS
T ss_pred cCCEEEEECc--------cHH---HHHHHHHHHHCCCeEEEEeC
Confidence 4689999852 434 46688999999999998743
No 251
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=21.23 E-value=3.2e+02 Score=21.91 Aligned_cols=108 Identities=10% Similarity=0.135 Sum_probs=61.1
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH--hcCEEEEcCCC-CCCcHHHHHHHHc---CCcEE
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMRY---GTIPV 570 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~--~aDi~v~PS~~-E~fgl~~lEAma~---G~PvV 570 (662)
+.+++++.+.+. ....+..+-......+. .. .+.......+. ..|++++-... +.-|+.+++.+.. .+|+|
T Consensus 3 ~~~ilivdd~~~-~~~~l~~~l~~~~~~v~-~~-~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii 79 (126)
T 1dbw_A 3 DYTVHIVDDEEP-VRKSLAFMLTMNGFAVK-MH-QSAEAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSI 79 (126)
T ss_dssp CCEEEEEESSHH-HHHHHHHHHHHTTCEEE-EE-SCHHHHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEE
T ss_pred CCEEEEEcCCHH-HHHHHHHHHHhCCcEEE-Ee-CCHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEE
Confidence 356777777643 33333333222222332 22 23333334443 35777765443 3457777777653 57777
Q ss_pred E-eCCccc---ccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 571 V-HATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 571 a-s~~gg~---~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
. |..... .+.+.. |..+++..|.+.+++.++|..++.
T Consensus 80 ~~s~~~~~~~~~~~~~~----------ga~~~l~Kp~~~~~l~~~i~~~~~ 120 (126)
T 1dbw_A 80 VITGHGDVPMAVEAMKA----------GAVDFIEKPFEDTVIIEAIERASE 120 (126)
T ss_dssp EEECTTCHHHHHHHHHT----------TCSEEEESSCCHHHHHHHHHHHHT
T ss_pred EEECCCCHHHHHHHHHh----------CHHHheeCCCCHHHHHHHHHHHHH
Confidence 6 443322 223333 678999999999999999987764
No 252
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=21.09 E-value=95 Score=31.96 Aligned_cols=40 Identities=23% Similarity=0.374 Sum_probs=30.3
Q ss_pred CCceeEEEEeecccCccccCcH--HHHHhhHHHHHHhCCCcEEEEeec
Q 006091 149 RVSYNIVFVTAEAAPYSKTGGL--GDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 149 ~~~MkIl~vs~~~~P~~~~GG~--~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.++|||+.|++. .||+ .+.+.+||.+|+++|++|.+|-..
T Consensus 140 ~~~~kvIav~s~------KGGvGKTT~a~nLA~~La~~g~rVlliD~D 181 (373)
T 3fkq_A 140 NDKSSVVIFTSP------CGGVGTSTVAAACAIAHANMGKKVFYLNIE 181 (373)
T ss_dssp TTSCEEEEEECS------STTSSHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCCceEEEEECC------CCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 456777666642 3554 567889999999999999999755
No 253
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=20.77 E-value=1.1e+02 Score=29.28 Aligned_cols=38 Identities=16% Similarity=0.196 Sum_probs=26.7
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
+|+|++|+.+ |. -....+.-....++++|++|.|++..
T Consensus 1 m~~vL~v~aH--PD----De~l~~ggtia~~~~~G~~v~vv~lT 38 (227)
T 1uan_A 1 MLDLLVVAPH--PD----DGELGCGGTLARAKAEGLSTGILDLT 38 (227)
T ss_dssp CEEEEEEESS--TT----HHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CceEEEEEeC--CC----cHHHhHHHHHHHHHhCCCcEEEEEEc
Confidence 4789999864 53 34444555556677899999999865
No 254
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=20.69 E-value=71 Score=31.54 Aligned_cols=35 Identities=20% Similarity=0.165 Sum_probs=23.0
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
+|+.++|+.- +|++| ..+++.|.++||+|.++...
T Consensus 11 ~~~~vlVTGa------tG~iG---~~l~~~L~~~G~~V~~~~r~ 45 (321)
T 2pk3_A 11 GSMRALITGV------AGFVG---KYLANHLTEQNVEVFGTSRN 45 (321)
T ss_dssp --CEEEEETT------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CcceEEEECC------CChHH---HHHHHHHHHCCCEEEEEecC
Confidence 4555556531 46666 56788899999999987643
No 255
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=20.61 E-value=54 Score=28.78 Aligned_cols=24 Identities=25% Similarity=0.248 Sum_probs=20.4
Q ss_pred HHHHhhHHHHHHhCCCcEEEEeec
Q 006091 171 GDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 171 ~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
|.+-..+++.|.+.||+|+++...
T Consensus 12 G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 12 SILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CHHHHHHHHHHHHCCCCEEEEECC
Confidence 566688999999999999999754
No 256
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=20.57 E-value=3.5e+02 Score=22.02 Aligned_cols=108 Identities=8% Similarity=0.041 Sum_probs=63.5
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH--h-cCEEEEcCCC-CCCcHHHHHHHHc----CCc
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--G-CDILLMPSRF-EPCGLNQLYAMRY----GTI 568 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~--~-aDi~v~PS~~-E~fgl~~lEAma~----G~P 568 (662)
..+++|+.+.+ .....+..+-......+.... +.......+. . .|++++-... +.-|+.+++.+.. .+|
T Consensus 7 ~~~ilivdd~~-~~~~~l~~~L~~~g~~v~~~~--~~~~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ 83 (136)
T 3hdv_A 7 RPLVLVVDDNA-VNREALILYLKSRGIDAVGAD--GAEEARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRASERAALS 83 (136)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHHTTCCEEEES--SHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHTSTTTTCE
T ss_pred CCeEEEECCCH-HHHHHHHHHHHHcCceEEEeC--CHHHHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHhcCCCCCC
Confidence 45677777764 333333333333333444332 3332323333 2 6777776543 5668888887764 367
Q ss_pred EEEe-CCccc---ccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 569 PVVH-ATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 569 vVas-~~gg~---~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
+|.. ..... .+.+.. |..+++..|.+.+++.++|+++..
T Consensus 84 ii~~s~~~~~~~~~~~~~~----------g~~~~l~KP~~~~~l~~~i~~~~~ 126 (136)
T 3hdv_A 84 IIVVSGDTDVEEAVDVMHL----------GVVDFLLKPVDLGKLLELVNKELK 126 (136)
T ss_dssp EEEEESSCCHHHHHHHHHT----------TCSEEEESSCCHHHHHHHHHHHHC
T ss_pred EEEEeCCCChHHHHHHHhC----------CcceEEeCCCCHHHHHHHHHHHhc
Confidence 7763 33322 223333 678999999999999999988775
No 257
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=20.53 E-value=3.6e+02 Score=28.51 Aligned_cols=78 Identities=17% Similarity=0.086 Sum_probs=50.2
Q ss_pred HcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHHhcCCHHHH
Q 006091 564 RYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENA 643 (662)
Q Consensus 564 a~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~~~~~fs~e~~ 643 (662)
..|+|+....+|---+-++.|++.. -...++-.+|..+|.+.+.+.+. +.+...++.++-..-+|+.+.+
T Consensus 264 ~~g~PI~fig~Ge~vddL~~f~~~~------~~~~llg~gd~~~l~e~~~~~~~----~~~~~~~~~~k~~~~~f~l~d~ 333 (443)
T 3dm5_A 264 ATGAPIKFIGTGEKIDDIEPFDPPR------FVSRLLGLGDIQGLLEKFKELEK----EVEIKEEDIERFLRGKFTLKDM 333 (443)
T ss_dssp TTCCCEEEEECSSSTTCEEECCHHH------HHHHHTTTTCHHHHHHHHHHHHT----THHHHHHHHHHHHTTCCCHHHH
T ss_pred HHCCCEEEEEcCCChHHhhhCCHHH------HHHHHcCCCcHHHHHHHHHHhhh----hhHHHHHHHHHHhhCCcCHHHH
Confidence 5799998654553335566554432 23445567899999999888764 3321123554445568999999
Q ss_pred HHHHHHHH
Q 006091 644 AIQYEQVF 651 (662)
Q Consensus 644 a~~~~~iy 651 (662)
.+++.++-
T Consensus 334 ~~q~~~~~ 341 (443)
T 3dm5_A 334 YAQLEAMR 341 (443)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988763
No 258
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=20.51 E-value=97 Score=30.55 Aligned_cols=39 Identities=13% Similarity=0.013 Sum_probs=27.7
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
..+||++|+.+ |. -....+.-+...++++|++|.|++..
T Consensus 6 ~~~rvLvv~aH--PD----De~lg~GGtia~~~~~G~~V~vv~~T 44 (273)
T 3dff_A 6 GATRLLAISPH--LD----DAVLSFGAGLAQAAQDGANVLVYTVF 44 (273)
T ss_dssp --CEEEEEESS--TT----HHHHHHHHHHHHHHHTTCEEEEEETT
T ss_pred CCCCEEEEEeC--CC----hHHHhHHHHHHHHHHCCCcEEEEEEe
Confidence 36899999964 53 34455556666788899999999865
No 259
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=20.36 E-value=1.1e+02 Score=30.68 Aligned_cols=27 Identities=19% Similarity=0.346 Sum_probs=22.7
Q ss_pred cHHHHHhhHHHHHHhCCCcEEEEeecC
Q 006091 169 GLGDVCGSLPVALAARGHRVMVVSPRY 195 (662)
Q Consensus 169 G~~~~~~~La~~L~~~GheV~Vit~~~ 195 (662)
|-.+.+.+||.+|+++|++|.+|....
T Consensus 26 GKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 26 GKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp SHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred hHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 445578899999999999999998764
No 260
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=20.32 E-value=73 Score=31.61 Aligned_cols=25 Identities=28% Similarity=0.343 Sum_probs=19.1
Q ss_pred cCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 167 TGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 167 ~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
+|++| ..+++.|.++||+|.+++..
T Consensus 10 tG~iG---~~l~~~L~~~g~~V~~~~r~ 34 (330)
T 2c20_A 10 AGYIG---SHAVKKLVDEGLSVVVVDNL 34 (330)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred CcHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 35555 66788899999999998643
No 261
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=20.31 E-value=68 Score=30.86 Aligned_cols=36 Identities=31% Similarity=0.315 Sum_probs=27.0
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
..||.++|+.- .||+| ..+++.|.++|++|.++...
T Consensus 5 ~~~k~vlVTGa------s~gIG---~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 5 RFVRHALITAG------TKGLG---KQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp -CCCEEEETTT------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred cccCEEEEeCC------CchhH---HHHHHHHHHCCCEEEEEcCC
Confidence 35788888752 46777 57899999999999987543
No 262
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=20.29 E-value=3.6e+02 Score=22.11 Aligned_cols=107 Identities=13% Similarity=0.116 Sum_probs=59.6
Q ss_pred CeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH--hcCEEEEcCCC-CCCcHHHHHHHHc---CCcEE
Q 006091 497 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMRY---GTIPV 570 (662)
Q Consensus 497 d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~--~aDi~v~PS~~-E~fgl~~lEAma~---G~PvV 570 (662)
..+++++.+.+ .....+..+-......+. .. .+.......+. ..|++++-. . +.-|+.+++.+.. .+|+|
T Consensus 4 ~~~iLivdd~~-~~~~~l~~~L~~~g~~v~-~~-~~~~~a~~~l~~~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii 79 (142)
T 2qxy_A 4 TPTVMVVDESR-ITFLAVKNALEKDGFNVI-WA-KNEQEAFTFLRREKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVA 79 (142)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHGGGTCEEE-EE-SSHHHHHHHHTTSCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEE
T ss_pred CCeEEEEeCCH-HHHHHHHHHHHhCCCEEE-EE-CCHHHHHHHHhccCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEE
Confidence 35677776654 333333333333333333 22 13333333443 468877765 4 2345556655543 57777
Q ss_pred Ee-CCccc---ccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 571 VH-ATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 571 as-~~gg~---~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
.- ..... .+.+.. |..+++..|.+.+++.++|..++.
T Consensus 80 ~ls~~~~~~~~~~~~~~----------g~~~~l~kP~~~~~l~~~i~~~~~ 120 (142)
T 2qxy_A 80 VLSAYVDKDLIINSVKA----------GAVDYILKPFRLDYLLERVKKIIS 120 (142)
T ss_dssp EEESCCCHHHHHHHHHH----------TCSCEEESSCCHHHHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHC----------CcceeEeCCCCHHHHHHHHHHHHh
Confidence 63 33322 222333 678899999999999999998876
No 263
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=20.28 E-value=41 Score=33.94 Aligned_cols=35 Identities=14% Similarity=0.102 Sum_probs=24.6
Q ss_pred CceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
.+|+|++... +|++| ..+++.|.++||+|.+++-.
T Consensus 24 ~~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 24 SPKTWLITGV-------AGFIG---SNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp SCCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred CCCeEEEECC-------CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 3466665432 35565 56888899999999998754
No 264
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=20.24 E-value=73 Score=31.79 Aligned_cols=24 Identities=25% Similarity=0.355 Sum_probs=18.7
Q ss_pred cCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 167 TGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 167 ~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
+|++| ..+++.|.++||+|.++..
T Consensus 10 tG~iG---~~l~~~L~~~g~~V~~~~r 33 (347)
T 1orr_A 10 CGFLG---SNLASFALSQGIDLIVFDN 33 (347)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEEC
T ss_pred CchhH---HHHHHHHHhCCCEEEEEeC
Confidence 46666 5678889999999998863
No 265
>3ez2_A Plasmid partition protein A; type IA, DNA binding, winged-HTH, DNA bindin; HET: ADP EPE; 2.05A {Escherichia coli} PDB: 3ez6_A* 3ez7_A
Probab=20.15 E-value=79 Score=32.83 Aligned_cols=39 Identities=21% Similarity=0.344 Sum_probs=28.4
Q ss_pred CceeEEEEeecccCccccCcHH--HHHhhHHHHHH------hCCCcEEEEeec
Q 006091 150 VSYNIVFVTAEAAPYSKTGGLG--DVCGSLPVALA------ARGHRVMVVSPR 194 (662)
Q Consensus 150 ~~MkIl~vs~~~~P~~~~GG~~--~~~~~La~~L~------~~GheV~Vit~~ 194 (662)
.+|||+.|++. .||+| +.+.+||.+|+ ++|+.|.+|-..
T Consensus 106 ~~~~vIav~s~------KGGvGKTT~a~nLA~~La~~~~~~~~g~rVlliD~D 152 (398)
T 3ez2_A 106 SEAYVIFISNL------KGGVSKTVSTVSLAHAMRAHPHLLMEDLRILVIDLD 152 (398)
T ss_dssp CSCEEEEECCS------SSSSSHHHHHHHHHHHHHHCTTTGGGCCCEEEEEEC
T ss_pred CCCeEEEEEeC------CCCccHHHHHHHHHHHHHhcchhhcCCCeEEEEeCC
Confidence 45777666642 46665 47788999999 479999999655
No 266
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=20.12 E-value=79 Score=29.37 Aligned_cols=34 Identities=29% Similarity=0.371 Sum_probs=23.9
Q ss_pred ceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeec
Q 006091 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (662)
Q Consensus 151 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~ 194 (662)
+|||+++.. +|++| ..+++.|.++||+|.+++..
T Consensus 4 m~~ilItGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 4 VKKIVLIGA-------SGFVG---SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CCEEEEETC-------CHHHH---HHHHHHHHTTTCEEEEECSC
T ss_pred CCEEEEEcC-------CchHH---HHHHHHHHHCCCEEEEEEcC
Confidence 366664432 35555 66889999999999998654
No 267
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=20.09 E-value=75 Score=31.56 Aligned_cols=37 Identities=24% Similarity=0.443 Sum_probs=24.9
Q ss_pred cccCCceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEee
Q 006091 146 AQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (662)
Q Consensus 146 ~~~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~ 193 (662)
+|....+||++|.. |.+| ..+|..|++.||+|+++..
T Consensus 10 ~~~~~~~~I~VIG~--------G~mG---~~iA~~la~~G~~V~~~d~ 46 (302)
T 1f0y_A 10 AKKIIVKHVTVIGG--------GLMG---AGIAQVAAATGHTVVLVDQ 46 (302)
T ss_dssp --CCCCCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECS
T ss_pred cccccCCEEEEECC--------CHHH---HHHHHHHHhCCCeEEEEEC
Confidence 33333467988852 4444 4578889999999998753
No 268
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=20.03 E-value=1.3e+02 Score=35.18 Aligned_cols=87 Identities=16% Similarity=0.139 Sum_probs=45.2
Q ss_pred ccCCCcceeEEEEeCCCCCcccccccc-cccCcccccccccccccccccCCceeEEEEeecccCccccCcHHHHHhhHHH
Q 006091 101 EKDGSGLVIGFHFIPPSGDHEVIDSSK-DIDGYGVKKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPV 179 (662)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~ 179 (662)
-.|.-|.+|||.-.+..-+.....+.. .....+.... .....+..+..++|||++++.- .| ..|+...+..+.+
T Consensus 160 ~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~krIaIlTSG-Gd---aPGmNAaIRaVVr 234 (989)
T 3opy_A 160 TRDPMGDVISFSSYPSLNSKKITSPDFFLHPKKEVRSE-ESIVEQVKSEEGKKKIAIITSG-GD---APGMNAAVRAVTR 234 (989)
T ss_dssp EESSSEEEEECCSSSCC-CCCSCCCCC----------------------CCSEEEEEEECS-SC---CTTHHHHHHHHHH
T ss_pred EecCCCCEEeeecCCCccccCCCchhhhcccccchhhc-ccccccccccccCCEEEEEeeC-CC---chhHHHHHHHHHH
Confidence 458899999997764321111111110 0000000000 1111122223456899999974 34 4688889999999
Q ss_pred HHHhCCCcEEEEe
Q 006091 180 ALAARGHRVMVVS 192 (662)
Q Consensus 180 ~L~~~GheV~Vit 192 (662)
.....|++|.-+-
T Consensus 235 ~a~~~G~~V~Gi~ 247 (989)
T 3opy_A 235 AGIFYGCKVYACY 247 (989)
T ss_dssp HHHHTTEEEEEEC
T ss_pred HHHHCCCEEEEEe
Confidence 8888898776664
No 269
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=20.02 E-value=3.6e+02 Score=21.96 Aligned_cols=107 Identities=11% Similarity=0.071 Sum_probs=59.1
Q ss_pred eEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHH--hcCEEEEcCCC------CCCcHHHHHHHH---cC
Q 006091 498 IQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF------EPCGLNQLYAMR---YG 566 (662)
Q Consensus 498 ~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~--~aDi~v~PS~~------E~fgl~~lEAma---~G 566 (662)
.+++++.+.+ .....+..+-......+. .. .+.......+. ..|++++-... +.-|+.+++.+. ..
T Consensus 4 ~~ilivdd~~-~~~~~l~~~L~~~g~~v~-~~-~~~~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~ 80 (140)
T 2qr3_A 4 GTIIIVDDNK-GVLTAVQLLLKNHFSKVI-TL-SSPVSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRD 80 (140)
T ss_dssp CEEEEECSCH-HHHHHHHHHHTTTSSEEE-EE-CCHHHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTT
T ss_pred ceEEEEeCCH-HHHHHHHHHHHhCCcEEE-Ee-CCHHHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcC
Confidence 4667776654 333333333222222333 22 13333334444 35777765443 345677776665 36
Q ss_pred CcEEEe-CCcc---cccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHH
Q 006091 567 TIPVVH-ATGG---LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 617 (662)
Q Consensus 567 ~PvVas-~~gg---~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~ 617 (662)
+|+|+- .... ..+.+.. |..+++..|.+.+++.++|..++.
T Consensus 81 ~~ii~ls~~~~~~~~~~~~~~----------g~~~~l~kp~~~~~l~~~l~~~~~ 125 (140)
T 2qr3_A 81 LPVVLFTAYADIDLAVRGIKE----------GASDFVVKPWDNQKLLETLLNAAS 125 (140)
T ss_dssp CCEEEEEEGGGHHHHHHHHHT----------TCCEEEEESCCHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCHHHHHHHHHc----------CchheeeCCCCHHHHHHHHHHHHH
Confidence 777773 3222 1223333 678999999999999999988875
Done!