Citrus Sinensis ID: 006099

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-
MEDEKGVLVQSLIDTVNEISTISDYRGTVKKQYCNLARRLKLLTPMFEEIKESKEAIPEETSKALVSLKEALASAKELLRFGSEGSKIYLVLERGEIMTKFYEVTAQLEQALSAISYENLDISDEVKEQVELVLSQFRRAKGRVDAPDVELYEELLSLYNKNNDVTPDPAVLRGLAEKLQLMGIADLTQESLALHEMVASTGGDPGETIEKMSMLLKKIKDFVQTENPNLDAPLKEKNPGPSQGGQASSDRNHKAPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEAGHRTCPKTQQTLTSTAVTPNYVLRSLIAQWCEANGIEPPKRPSSSRPSKTSSACSPAERTKIEILLCKLTSGSPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRTQEHAVTALLNLSICEDNKGSIVSSGAVPSIVHVLRIGSMEARENAAATLFSLSVIDENKVTIGASGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMHLLTEPGGGMVDEALAILAILSSHPEGKAAIGAAEAVPVLVEVIGNGSPRNRENAAAVLVHLCAGDQQYLAEAKELGVMGPLVDLAQNGTDRGKRKAAQLLERMSRFIEQQKQAQVQTESQSQIQEARLPSNAADS
ccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHccHHHHHHccccccHHHHHHHHHHHHHcccccccHHHHHccccHHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHcccccHHHHHHHHcccHHHHHHHHHHHHHHccccccHHHHHHcccHHHHHHHHccccccHHHHHHHHHHHHccccHHHHHHHccccHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHcccccccccc
****KGVLVQSLIDTVNEISTISDYRGTVKKQYCNLARRLKLLTPMFEEIKE**********KALVSLKEALASAKELLRFGSEGSKIYLVLERGEIMTKFYEVTAQLEQALSAISYENLDISDEVKEQVELVLSQFRRAKGRVDAPDVELYEELLSLYNKNNDVTPDPAVLRGLAEKLQLMGIADLTQESLALHEM***************SMLLKKIKDFVQTENP****************************VIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEAGHRTCPKTQQTLTSTAVTPNYVLRSLIAQWCEAN***************************IEILLCKL*******QRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRTQEHAVTALLNLSICEDNKGSIVSSGAVPSIVHVLRIGSMEARENAAATLFSLSVIDENKVTIGASGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMHLLTEPGGGMVDEALAILAILSSHPEGKAAIGAAEAVPVLVEVIGNGSPRNRENAAAVLVHLCAGDQQYLAEAKELGVMGPLVDLAQNGTDRGKRKAAQLLERMS*******************************
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MEDEKGVLVQSLIDTVNEISTISDYRGTVKKQYCNLARRLKLLTPMFEEIKESKEAIPEETSKALVSLKEALASAKELLRFGSEGSKIYLVLERGEIMTKFYEVTAQLEQALSAISYENLDISDEVKEQVELVLSQFRRAKGRVDAPDVELYEELLSLYNKNNDVTPDPAVLRGLAEKLQLMGIADLTQESLALHEMVASTGGDPGETIEKMSMLLKKIKDFVQTENPNLDAPLKEKNPGPSQGGQASSDRNHKAPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEAGHRTCPKTQQTLTSTAVTPNYVLRSLIAQWCEANGIEPPKRPSSSRPSKTSSACSPAERTKIEILLCKLTSGSPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRTQEHAVTALLNLSICEDNKGSIVSSGAVPSIVHVLRIGSMEARENAAATLFSLSVIDENKVTIGASGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMHLLTEPGGGMVDEALAILAILSSHPEGKAAIGAAEAVPVLVEVIGNGSPRNRENAAAVLVHLCAGDQQYLAEAKELGVMGPLVDLAQNGTDRGKRKAAQLLERMSRFIEQQKQAQVQTESQSQIQEARLPSNAADS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
U-box domain-containing protein 13 Functions as an E3 ubiquitin ligase.confidentQ9SNC6
Protein spotted leaf 11 Defense related protein that negatively regulates programmed cell death. In vitro, possesses E3 ubiquitin ligase activity.probableA2ZLU6

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2Z6G, chain A
Confidence level:very confident
Coverage over the Query: 353-646
View the alignment between query and template
View the model in PyMOL
Template: 2C2L, chain A
Confidence level:very confident
Coverage over the Query: 70-220,251-331
View the alignment between query and template
View the model in PyMOL
Template: 4EPO, chain C
Confidence level:probable
Coverage over the Query: 253-326
View the alignment between query and template
View the model in PyMOL