Query 006106
Match_columns 661
No_of_seqs 264 out of 859
Neff 9.0
Searched_HMMs 46136
Date Thu Mar 28 18:26:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006106.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006106hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2001 Gamma-tubulin complex, 100.0 9E-101 2E-105 795.8 59.5 623 2-639 84-715 (734)
2 KOG2065 Gamma-tubulin ring com 100.0 4.2E-78 9E-83 598.8 44.5 591 15-661 1-665 (679)
3 PF04130 Spc97_Spc98: Spc97 / 100.0 2E-68 4.2E-73 600.2 45.9 505 18-544 1-542 (542)
4 KOG2000 Gamma-tubulin complex, 100.0 1.5E-53 3.2E-58 469.7 37.5 518 9-570 201-761 (879)
5 KOG4344 Uncharacterized conser 100.0 5.3E-28 1.2E-32 249.0 35.6 608 10-657 290-1113(1121)
6 PF14609 GCP5-Mod21: gamma-Tub 47.1 1.7E+02 0.0036 31.7 10.1 62 9-84 179-244 (653)
7 KOG4344 Uncharacterized conser 27.9 35 0.00076 37.8 1.8 123 93-219 451-581 (1121)
8 PF13060 DUF3921: Protein of u 26.0 1.2E+02 0.0025 21.4 3.4 45 501-545 6-51 (58)
9 KOG2000 Gamma-tubulin complex, 24.5 1.1E+02 0.0024 36.2 5.1 121 417-546 589-711 (879)
10 PLN00032 DNA-directed RNA poly 22.5 94 0.002 24.1 2.7 46 504-550 10-55 (71)
11 PF08673 RsbU_N: Phosphoserine 21.5 3.1E+02 0.0067 21.8 5.6 43 519-564 31-73 (77)
12 PF14689 SPOB_a: Sensor_kinase 21.1 3.5E+02 0.0076 20.3 5.7 37 312-348 18-54 (62)
13 PF15027 DUF4525: Domain of un 20.7 4.8E+02 0.011 22.8 6.9 59 60-120 38-102 (138)
No 1
>KOG2001 consensus Gamma-tubulin complex, DGRIP84/SPC97 component [Cytoskeleton]
Probab=100.00 E-value=8.9e-101 Score=795.79 Aligned_cols=623 Identities=44% Similarity=0.729 Sum_probs=539.3
Q ss_pred CCCCCCccchHHHHHHHHHHHhcCCCCCceeeecccCCCCCC-CCCCCccceEecCCCCHHHHHHHHHHHHHHhHHHHHH
Q 006106 2 AIGCYDAGVQELLVIDDLLSALVGIEGRYISIKRRVNHVHGN-DTYDSTVTFQVDASMDLALQEMAKRIFPLCESFVLTG 80 (661)
Q Consensus 2 ~~~~~~~~~~E~~lv~dlL~~L~G~~g~~~~~~~~~~~~~~~-~~~~~~~~f~i~~~~~~sl~~ll~~il~~g~~~~~l~ 80 (661)
++|.+|.+.||..+++||+++|.|++|.|+++..-. .+.. ..-..+..|.|.|+.+-+++.++++++|+|.+|..++
T Consensus 84 ~is~~~lp~QE~~li~dLl~af~Gv~~ryV~~Q~~~--~s~~~~~~~~~~~F~v~~~fd~~ir~la~eilpl~~yy~~v~ 161 (734)
T KOG2001|consen 84 EISDMPLPSQESKLIDDLLYAFVGVEGRYVSPQYMI--ISEAYEKWIDSIFFMVLPRFDLAIRELAEEILPLASYYLLVQ 161 (734)
T ss_pred CcccCCchhHHHHHHHHHHHHHcCCCcceeecchhh--hhhhhhhhccCcceeeccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999986511 1110 0001357899999999999999999999999999999
Q ss_pred HHhhhhcCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHhhhhhHHHHHHHHHHHHHhhcCCCchhh
Q 006106 81 QFVESRSQFKNGLVNHAFAASLRALLLDYEAMVAQLEHQFRLGRLSIQGLWFYCQPMLGSMQAVSAVIHKASANNFTGSA 160 (661)
Q Consensus 81 ~fv~~~~~~~~g~~~~Al~~~l~~~L~~y~~~i~~lE~~~~~~~lsL~~l~~~~~~~~~~l~~L~~i~~~~~~~~~~g~~ 160 (661)
+||+..+....|.|.+|+|+|+++.|.+|+..|.++|++.+.+.+|+++||++++|++..|+.++..++.+..+.++||.
T Consensus 162 ~fie~~s~f~~G~vn~alaaAlr~ll~dyy~li~qlE~e~R~~~lslq~L~~y~qP~m~~m~~l~~~~~~~~~~~~~gg~ 241 (734)
T KOG2001|consen 162 DFIEETSFFEYGQVNHALAAALRELLYDYYELISQLEQELRTNRLSLQDLWFYMQPMMRSMRRLAVAATTTVKKVCKGGA 241 (734)
T ss_pred HHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHhhhHHHHHHHHHHHhhhhccccCchH
Confidence 99999888899999999999999999999999999999999999999999999999999999998888888778999999
Q ss_pred HHHHHHHHHHhccCChHHHHHHHHHHHHHhHHHHHHHHHHHhcceEcCCCCcceeeeCCccccccccccchhhhhccccc
Q 006106 161 VLNLLQSQAKAMAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDKSLLKESLTQDYDAKYWRQRYS 240 (661)
Q Consensus 161 lL~~L~~~~~~~~g~~~~~~~l~~ll~~~~~p~~~~l~~Wi~~G~l~D~~~EFfI~~~~~~~~~~~~~~~~~~~W~~~y~ 240 (661)
+|+.|++++..+.||+.++.++.++++.+++||++|+..|+..|.++|||+||||.++ ...++.+++|+.++||+++|+
T Consensus 242 vls~l~~~~~~~~Gd~~a~~ll~~l~r~as~~Y~~mLe~Wi~~Gii~Dpy~EFmi~d~-~~~k~~l~ed~~d~YW~~RY~ 320 (734)
T KOG2001|consen 242 VLSLLQSSIKENLGDRSARMLLKKLLRNASQPYCTMLEEWIYQGIINDPYQEFMIYDN-LITKEDLPEDYTDKYWDQRYT 320 (734)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHhcchHHHHHHHHHhcccccCchHhHhhhhc-chhhhcCchhhhHHHHHHhhe
Confidence 9999999998899999999999999999999999999999999999999999999999 677788889999999999999
Q ss_pred c-ccCCCcchHHHHHHHHHhhhHHHHHHHhcCCCCCCCccccccc-ccCCchhhHHHHHHHHHHHHHHHHHHHHhhccHH
Q 006106 241 L-KDGIPSFLANIAGKILTTGKYLNVMRECGHSAQVPTSENSKLL-SFGSNHHYLECVKVAYEFASGELLNLIKERYDLM 318 (661)
Q Consensus 241 l-~~~lP~Fl~~~a~~Il~~GK~l~~Lr~~~~~~~~p~~e~~~~~-~f~~~~~~~~~I~~~~~~~s~~l~~ll~~~~~L~ 318 (661)
| +|.+|.|+.+.|+|||.||||+|++|+|+..++.|...+.... ....+..+.+.|+++|..||..++++++++++|.
T Consensus 321 ir~dqiP~fL~~~adkIL~tGKYLNVvReC~~~v~~p~~~n~~~~~~~~~e~~~~e~I~~ay~~A~~~lL~ll~~e~dL~ 400 (734)
T KOG2001|consen 321 IRKDQIPGFLLSEADKILRTGKYLNVVRECGKIVTIPQSSNEINDPADLMESNHEEYIKKAYEFANEILLKLLFEEYDLV 400 (734)
T ss_pred echhhcchHHHHHHHHHHHhhhHHHHHHHhCccCCCCcchhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 9 7899999999999999999999999999999887765432111 1222478899999999999999999999999999
Q ss_pred HHHHHHHHhHhcCCcchHHHHHHHHHHHHhcccccccHHHHHHHHHHHHH-hhhcccCCCCCccceeeccccHHHHHHhh
Q 006106 319 GKLRSIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALR-STAAAADPCHEDLTCSVERSSLLKRMATL 397 (661)
Q Consensus 319 ~hL~~l~~~fLL~~Gdf~~~f~~~~~~~L~~~~~~~~~~~L~~~l~~al~-~s~~~~d~~~~~l~~~l~~~~l~~~l~~~ 397 (661)
.||+.+|+||||.+|||+.+|+|.+.++|.|+.+.+++.+|+++|+.|++ .+.+..||++++++|.+.+.+++.++..+
T Consensus 401 ~hLrslK~YfLldQgdF~~~Fld~~~eEL~K~v~~i~p~kLqsLL~laLr~~s~a~~Dp~k~~L~i~~~~~~L~~ql~~~ 480 (734)
T KOG2001|consen 401 GHLRSLKHYFLLDQGDFFVTFLDKAEEELTKNVENISPEKLQSLLDLALREQSEAANDPMKEDLKICVDPTDLITQLSHI 480 (734)
T ss_pred HHHHHHHHHHhhcccchHHHHHHHHHHHHhcchhhcCHHHHHHHHHHHHHhhhcccCCchhhheeeeecHhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 77788999999999999999999998876
Q ss_pred hccccccCCCCCCCCCC---CCCcceeEEEeeeecCCCceeeechhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 006106 398 KGVEIKTSSDSVDLEQP---VSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQGARA 474 (661)
Q Consensus 398 ~~~~~~~~~~~~~~~~~---~~~~~~d~l~L~y~v~wPL~lilt~~~l~~Y~~iFr~Ll~lk~~~~~L~~~w~~~~~~r~ 474 (661)
..++... .+++...+| ..+.|+++++++|+|||||++||++++|.|||.|||++|.|||++++|+.+|..++..|.
T Consensus 481 l~ie~~e-~~ans~~dP~~~l~lsGlE~faf~Y~vkwPLSlIIsrkal~kYQmLfR~lf~lkhVerqL~~~W~~~~~~r~ 559 (734)
T KOG2001|consen 481 LAIEPEE-ESANSQADPLEHLDLSGLEAFAFDYEVKWPLSLIISRKALIKYQMLFRYLFYLKHVERQLCETWQSHSKARS 559 (734)
T ss_pred HhcCccc-cccccccCcchhccccchhhheeeeccCCceeeeEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Confidence 5544211 111112334 568999999999999999999999999999999999999999999999999999988776
Q ss_pred cCCch-hhHHhHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCh-HHHH
Q 006106 475 FNASG-TAISRSSLLCRSMLKFINSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLLHLP-DLLK 552 (661)
Q Consensus 475 ~~~~~-~~~~~~~~lr~~m~~fv~~l~~Y~~~~VIe~~~~~~~~~l~~~~~~d~l~~~H~~fL~~i~~~~~L~~~-~l~~ 552 (661)
.+..+ .+.+.++.+|++|++||+++.+|++.+||||+|+.|+..+++++++|+++..|+.||+.|++.|+|+.+ .+++
T Consensus 560 ~~~~~~q~~r~s~~LR~RMl~fiqsi~~Y~~~eViEp~W~~l~~~l~~a~~vD~Vl~~he~fld~CLk~ClL~~~~~llk 639 (734)
T KOG2001|consen 560 SNTKGAQIVRASFLLRQRMLNFIQSIEYYMTQEVIEPNWHSLEKCLKNARNVDEVLNEHEGFLDTCLKRCLLTLSPLLLK 639 (734)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhccCChHHHHH
Confidence 66554 345778899999999999999999999999999999999999999999999999999999999999986 7899
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCChhHHHHHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHh
Q 006106 553 KVERLKSLCLQYAAATQWLISSSIDLPKLEEPSDGFSGSEKFKRLKLRSLSQVQKVMIRDATVTESILKFEREFNNELQS 632 (661)
Q Consensus 553 ~l~~il~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~F~~~~~~ 632 (661)
.+.++..+|..||..++.+.+.. .-++..+..+ .|.+ .. .+.+.+.+ --+.+.+-+.+++..|++|++.
T Consensus 640 ~~~kL~~vCl~f~~~~q~~~~~~---~~~~~~~~~~-~~~~-d~--~~k~~~t~----li~~leei~~~~~~~f~~~l~~ 708 (734)
T KOG2001|consen 640 SFSKLYKVCLMFCSFTQKLTQSD---PTDEEKNSVG-HPQF-DE--GRKEDDTL----LISKLEEIISNADKNFRDCLKN 708 (734)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc---chhhhhcccc-ccch-hh--hhhhhhHH----HHHHHHHHHHHhHHHHHHHHHH
Confidence 99999999999999999987421 0011000001 0111 00 00011111 0223345567799999999999
Q ss_pred HHHHhcc
Q 006106 633 LGPILSS 639 (661)
Q Consensus 633 l~~~l~~ 639 (661)
|+..|++
T Consensus 709 L~~rlsk 715 (734)
T KOG2001|consen 709 LLQRLSK 715 (734)
T ss_pred HHHHccc
Confidence 9999994
No 2
>KOG2065 consensus Gamma-tubulin ring complex protein [Cytoskeleton]
Probab=100.00 E-value=4.2e-78 Score=598.78 Aligned_cols=591 Identities=22% Similarity=0.347 Sum_probs=464.2
Q ss_pred HHHHHHHHhcCCCCCceeeecccCCCCCCCCCCCccceEecCCCCHHHHHHHHHHHHHHhHHHHHHHHh---hhhc----
Q 006106 15 VIDDLLSALVGIEGRYISIKRRVNHVHGNDTYDSTVTFQVDASMDLALQEMAKRIFPLCESFVLTGQFV---ESRS---- 87 (661)
Q Consensus 15 lv~dlL~~L~G~~g~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~sl~~ll~~il~~g~~~~~l~~fv---~~~~---- 87 (661)
|++|||.||.|++|..|.++.+.+ |-.. +.. ++.-++|++++++++++++|..|+.+.+|. ++.+
T Consensus 1 MiHeLLLAl~g~~g~~~~~~~R~~---GLa~---~~d--~p~FihPsEr~i~~rliklg~~Y~e~~rFtswIrsvTsH~~ 72 (679)
T KOG2065|consen 1 MIHELLLALRGHNGEQLGIKARFN---GLAE---TTD--IPQFIHPSEREIFMRLIKLGKVYQEVERFTSWIRSVTSHSS 72 (679)
T ss_pred CHHHHHHHHhCCChhheeehhhcc---cccc---ccC--CccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc
Confidence 689999999999999999987432 1111 011 122467899999999999999998888876 2211
Q ss_pred -----------CCCcChHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCCcHHHHHHhhhhhHHHHHHHHHHHHHhhcCC
Q 006106 88 -----------QFKNGLVNHAFAASLRALLLDYEAMVAQLEHQFRL-GRLSIQGLWFYCQPMLGSMQAVSAVIHKASANN 155 (661)
Q Consensus 88 -----------~~~~g~~~~Al~~~l~~~L~~y~~~i~~lE~~~~~-~~lsL~~l~~~~~~~~~~l~~L~~i~~~~~~~~ 155 (661)
...+|.|.+|+|.||..+|++|+..|..+|+.+.. ...+|+.++..+......+..+..++.++...+
T Consensus 73 ~r~~~~s~q~~~~lhg~Ylra~a~Gi~~~L~~Yr~ail~lEq~~Lg~~~~sls~V~~~L~~ff~Lfp~~~~vi~eI~~~~ 152 (679)
T KOG2065|consen 73 GRKSDTSGQLPDSLHGYYLRALAKGIEMALEEYRAAILRLEQYCLGNERNSLSYVYNALYAFFPLFPFMRNVITEIHVLN 152 (679)
T ss_pred cccccccccCCCccchHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHhhhhhHHHHHHHHHHHhcc
Confidence 12478999999999999999999999999999765 578899998888778888888999999998889
Q ss_pred CchhhHHHHHHHHHHhccCChHHHHHHHHHHHHHhHHHHHHHHHHHhcceEcCCCCcceeeeCCc--cccccccccchhh
Q 006106 156 FTGSAVLNLLQSQAKAMAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDKS--LLKESLTQDYDAK 233 (661)
Q Consensus 156 ~~g~~lL~~L~~~~~~~~g~~~~~~~l~~ll~~~~~p~~~~l~~Wi~~G~l~D~~~EFfI~~~~~--~~~~~~~~~~~~~ 233 (661)
.+||+||+.||++ ++|.|.++..+..++..|..++++++..||.+|.+.|+++||||+..+. ++..+.++...++
T Consensus 153 irGcqlL~~l~k~---HCg~p~ir~~l~~~l~~~h~vmy~qLaaWml~Gvl~D~H~EFFIK~q~~~~~d~ss~~ee~~e~ 229 (679)
T KOG2065|consen 153 IRGCQLLHNLHKQ---HCGHPDIRLELAIKLKPVHNVMYSQLAAWMLFGVLDDVHSEFFIKFQPTDAVDGSSFSEEATES 229 (679)
T ss_pred cchhHHHHHHHHh---ccCCCcHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccchheEEeccCCCCCCcccCchhhhhh
Confidence 9999999999996 5899999999999999999999999999999999999999999995442 1111111100000
Q ss_pred hh-----------ccccccc-----cCCCcchHH-HHHHHHHhhhHHHHHHHhcCCC-------CCCCcccc--------
Q 006106 234 YW-----------RQRYSLK-----DGIPSFLAN-IAGKILTTGKYLNVMRECGHSA-------QVPTSENS-------- 281 (661)
Q Consensus 234 ~W-----------~~~y~l~-----~~lP~Fl~~-~a~~Il~~GK~l~~Lr~~~~~~-------~~p~~e~~-------- 281 (661)
.- -..|.+. ...|.|.+- .+.++|+.|+...+.+.-.... +.|..|++
T Consensus 230 L~vhsLTgi~l~~l~D~rl~~E~nm~a~~~~~sl~~~s~~l~v~~~~s~~~~~R~~~~i~F~~~~~~~~e~eld~dlt~G 309 (679)
T KOG2065|consen 230 LLVHSLTGIALKNLEDYRLQYEVNMSALPGFFSLVLASKVLFVGQTVSVFKMGRNVKVINFKTDPLAAKEAELDSDLTYG 309 (679)
T ss_pred hhhcccchhhhhchhhhhHHHHHhhhccccceeeeccccceeeccchHHHhhccceeeeeccCCchhhHHhhccccchhh
Confidence 00 0123331 246777777 8899999999888887432110 11111110
Q ss_pred cccccCC-----------------chhhHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhHhcCCcchHHHHHHHHH
Q 006106 282 KLLSFGS-----------------NHHYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAR 344 (661)
Q Consensus 282 ~~~~f~~-----------------~~~~~~~I~~~~~~~s~~l~~ll~~~~~L~~hL~~l~~~fLL~~Gdf~~~f~~~~~ 344 (661)
.+.+=.+ ...|...|+.+++.|+.+||++.+++.+|.+||+++|+|||||+|||++.|++.+.
T Consensus 310 ~ll~~~Ed~f~aml~dLk~~~~f~~~~fE~vVd~ir~~va~hLw~l~V~e~DL~gqlk~iKDffLLgrGeffq~F~~~~~ 389 (679)
T KOG2065|consen 310 QLLSGREDEFFAMLVDLKNEDTFNVFRFEKVVDDIRNYVAAHLWELAVNEVDLEGQLKLIKDFFLLGRGEFFQEFCSQMV 389 (679)
T ss_pred hhcCCChHHHHHHHHhhhcCCceeeeeHHHHHHHHHHHHHHHHHHHHHhHHhHHhHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 0110000 03567789999999999999999999999999999999999999999999999999
Q ss_pred HHHhcccccccHHHHHHHHHHHHHhhhcccCCCCCccceeeccccHHHHHHhhhccccccCCCCCCCCCCCCCcceeEEE
Q 006106 345 EELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEIKTSSDSVDLEQPVSITGLETFS 424 (661)
Q Consensus 345 ~~L~~~~~~~~~~~L~~~l~~al~~s~~~~d~~~~~l~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~ 424 (661)
..|+.|++..+.++++-.++.|...+....|.|-+.++..+....=.... +..+.+ ++.+......+..|||++.
T Consensus 390 ~~m~tpp~~~tE~dv~v~FqlaAtkt~~~dDkyl~~~sL~~~~~grs~~a---D~~~~~--tGka~ltsdtsvdGWdAl~ 464 (679)
T KOG2065|consen 390 GTMETPPEERTEKDVTVSFQLAATKTGITDDKYLDKFSLICQRSGRSEPA---DTSDFN--TGKAFLTSDTSVDGWDALS 464 (679)
T ss_pred HHhhCCchhhcccccchhhhhhhhhccccccccccceEEEecccCCCCcc---chhhhc--cCcccccCCCCccchhhhc
Confidence 99999999888888888899987776666777766666655443200000 000011 1111122345689999999
Q ss_pred eeeecCCCceeeechhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc---C-CchhhHHhHHHHHHHHHHHHHHHH
Q 006106 425 LSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQGARAF---N-ASGTAISRSSLLCRSMLKFINSLL 500 (661)
Q Consensus 425 L~y~v~wPL~lilt~~~l~~Y~~iFr~Ll~lk~~~~~L~~~w~~~~~~r~~---~-~~~~~~~~~~~lr~~m~~fv~~l~ 500 (661)
|.|+|.|||+++|||.++++||.||+||+++||+++.|+.+|...+..... . +.++.++ |++|+.|.+|++|+|
T Consensus 465 L~Y~v~WPl~llFtp~~~e~yn~VF~yLl~irr~Q~Elq~~WA~qm~r~h~~s~q~~d~~~I~--WRlRnhmaFl~~NlQ 542 (679)
T KOG2065|consen 465 LKYEVEWPLNLLFTPTTIERYNNVFRYLLIIRRYQYELQRVWAKQMWRAHSASDQPPDNKIIT--WRLRNHMAFLLNNLQ 542 (679)
T ss_pred eeeEeccchheeechhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccch--HHHHHHHHHHHhhhh
Confidence 999999999999999999999999999999999999999999876532111 1 1122232 899999999999999
Q ss_pred HHHHhhcccccHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 006106 501 HYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQYAAATQWLISSSIDLPK 580 (661)
Q Consensus 501 ~Y~~~~VIe~~~~~~~~~l~~~~~~d~l~~~H~~fL~~i~~~~~L~~~~l~~~l~~il~~~~~F~~~~~~~~~~~~~~~~ 580 (661)
+|+++||||++|..++..|+...||+.++.+|+.||++++.+|||...++..++.+|+++|.+||+++..-. +
T Consensus 543 yYiQVDVlESQf~~L~~~I~s~~DFe~i~~aH~~fLsnllsqsFll~~pV~~~L~~i~~lC~~Fcn~~~Q~~------~- 615 (679)
T KOG2065|consen 543 YYIQVDVLESQFGILMNVIKSRSDFEVIQRAHTVFLSNLLSQSFLLNEPVYGTLLKIFGLCEKFCNHMTQTK------D- 615 (679)
T ss_pred eeeeehhHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhccC------C-
Confidence 999999999999999999999999999999999999999999999999999999999999999998764311 0
Q ss_pred CCCCCCCCCChhHHHHHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHHHhcccccccchHHHHHHHHhccCCC
Q 006106 581 LEEPSDGFSGSEKFKRLKLRSLSQVQKVMIRDATVTESILKFEREFNNELQSLGPILSSSSQAEPYLTHLAQLVLGVGFD 660 (661)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~F~~~~~~l~~~l~~~~~~~~~~~~l~~ll~rld~n 660 (661)
+ .+...++++.+.+.|.++...|+++|++. ++....+.|+|||+|||||
T Consensus 616 P------------------------------~d~~~~el~~l~e~F~~qs~sL~~iL~sv-k~~q~~~~L~qlLLRLdfN 664 (679)
T KOG2065|consen 616 P------------------------------SDDLEDELDQLNESFGVQSASLIQILVSV-KSAQCLGPLSQLLLRLDFN 664 (679)
T ss_pred C------------------------------cccchHHHHHHHHHhhhhHHHHHHHHHHc-cccccccHHHHHHHHhchh
Confidence 0 01124678999999999999999999996 7888999999999999999
Q ss_pred C
Q 006106 661 K 661 (661)
Q Consensus 661 ~ 661 (661)
+
T Consensus 665 ~ 665 (679)
T KOG2065|consen 665 C 665 (679)
T ss_pred H
Confidence 6
No 3
>PF04130 Spc97_Spc98: Spc97 / Spc98 family; InterPro: IPR007259 Members of this family are spindle pole body (SBP) components such as Spc97, Spc98 and gamma-tubulin. The SPB functions as the microtubule-organising centre in yeast, with the microtubule cytoskeleton playing an essential role in chromosome segregation, cellular organisation and vesicle trafficking in eukaryotic cells. In most cells, the centrosome is the primary microtubule-organising centre that nucleates and organises microtubules. Gamma-tubulin localises to centrosomes and is required for microtubule nucleation. In Saccharomyces cerevisiae, gamma-tubulin forms a stable complex with Spc97 and Spc98 [].; GO: 0000226 microtubule cytoskeleton organization, 0000922 spindle pole, 0005815 microtubule organizing center; PDB: 3RIP_A.
Probab=100.00 E-value=2e-68 Score=600.22 Aligned_cols=505 Identities=29% Similarity=0.562 Sum_probs=354.0
Q ss_pred HHHHHhcCCCCCceeeecccCCCCCCCCCCCccceEecCC-----CCHHHHHHHHHHHHHHhHHHHHHHHhhhhcCC--C
Q 006106 18 DLLSALVGIEGRYISIKRRVNHVHGNDTYDSTVTFQVDAS-----MDLALQEMAKRIFPLCESFVLTGQFVESRSQF--K 90 (661)
Q Consensus 18 dlL~~L~G~~g~~~~~~~~~~~~~~~~~~~~~~~f~i~~~-----~~~sl~~ll~~il~~g~~~~~l~~fv~~~~~~--~ 90 (661)
|+|++|+|++|.+|++++. ...|.+.+. +++++++++++++++|+.|++|+.|++..... .
T Consensus 1 dll~~L~G~~s~~f~~~~~------------~~~~~~~~~~~~~~~~~~~~~~l~~i~~~g~~~~~l~~~i~~~~~~~~~ 68 (542)
T PF04130_consen 1 DLLYALQGVESTFFIWDKD------------SDRFELRPNISSHLSPPSLRSILNEILEIGTLYRRLRSFIERVSSSSSE 68 (542)
T ss_dssp HHHHHHTT---SSSEEETT-------------TEEE--S----TTS-HHHHHHHHHHHHHHHHHHHHHHHHHHTS----S
T ss_pred CHHHHccCCCCceEEEeCC------------CCeEEECCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Confidence 7999999999999999982 246666654 57899999999999999999999999975433 3
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCCcHHHHHHhhhhhHHHHHHHHHHHHHh----hcCCCchhhHHHHH
Q 006106 91 NGLVNHAFAASLRALLLDYEAMVAQLEHQFRL-GRLSIQGLWFYCQPMLGSMQAVSAVIHKA----SANNFTGSAVLNLL 165 (661)
Q Consensus 91 ~g~~~~Al~~~l~~~L~~y~~~i~~lE~~~~~-~~lsL~~l~~~~~~~~~~l~~L~~i~~~~----~~~~~~g~~lL~~L 165 (661)
.|++.+|||++++++|.+|+..|..+|.++.. +.+||..+...++|+...++.|++++.++ ..+..+|+.||+.|
T Consensus 69 ~~~~~~a~~~~l~~~L~~y~~~l~~le~~~~~~~~~sL~~l~~~l~~~~~~l~~L~~l~~~~~~~~~~~~~~g~~lL~~L 148 (542)
T PF04130_consen 69 RGPTLQAFASALSSILQEYREFLSELEESILSNGSLSLLQLLAQLRPWFRRLEALADLIQEIIQLSLSQNLRGGQLLSIL 148 (542)
T ss_dssp -SHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH-TT--HHHHHHHTHHHHHHHHHHHHHHHHH----HHHT--THHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCcHHHHHHHH
Confidence 89999999999999999999999999999876 78999999999999999999999999987 33478999999999
Q ss_pred HHHH-HhccCChHHHHHHHHHHHHHhHHHHHHHHHHHhcceEcCCCCcceeeeCCccccccccccchhhhhcccccc-cc
Q 006106 166 QSQA-KAMAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDKSLLKESLTQDYDAKYWRQRYSL-KD 243 (661)
Q Consensus 166 ~~~~-~~~~g~~~~~~~l~~ll~~~~~p~~~~l~~Wi~~G~l~D~~~EFfI~~~~~~~~~~~~~~~~~~~W~~~y~l-~~ 243 (661)
|+.+ ...+|++..++++..|+..|++||++++..||.+|++.||++||||..+++. ....++++|.++|.+ .+
T Consensus 149 ~~~~~~~~~g~~~~~~~l~~ll~~~~~p~l~~l~~Wl~~G~l~D~~~EFfI~~~~~~-----~~~~~~~~w~~~f~l~~~ 223 (542)
T PF04130_consen 149 YERIYHQQSGDPELRKILQRLLNRCLQPYLRMLDSWLYRGELDDPYDEFFIQRNKES-----NSESSEDFWDDRFVLRES 223 (542)
T ss_dssp HHHH---HS--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TTS-SSEEE---------------------EEE-GG
T ss_pred HHHHhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCccceeEeecccc-----cCcccchhhccCEEECcc
Confidence 9987 3358999999999999999999999999999999999999999999998321 123467899999999 67
Q ss_pred CCCcchHH-HHHHHHHhhhHHHHHHHhcCCCCCCCccccc---------------cccc--CCchhhHHHHHHHHHHHHH
Q 006106 244 GIPSFLAN-IAGKILTTGKYLNVMRECGHSAQVPTSENSK---------------LLSF--GSNHHYLECVKVAYEFASG 305 (661)
Q Consensus 244 ~lP~Fl~~-~a~~Il~~GK~l~~Lr~~~~~~~~p~~e~~~---------------~~~f--~~~~~~~~~I~~~~~~~s~ 305 (661)
.+|.|++. +|++|+.+||++++|+.|+............ ...+ .....+.+.|++++..+++
T Consensus 224 ~~P~fl~~~~a~~Il~~Gk~~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~ 303 (542)
T PF04130_consen 224 RVPSFLSKDLAEKILEIGKSLRLLRSCNPEHEWCSDQELSSDLCLSDKESSESSSLQPFEPLDQDKLESKIESQYKLVNK 303 (542)
T ss_dssp GS-TTS-HHHHHHHHHHHHHHHT------S------TT-SHHH----HHHHHHHHHHT-SS--HHHHHHHHHHHHHHHHH
T ss_pred cCChhcCHHHHHHHHHHHHHHHHHHHhccccccchhccchhhhhhhhhhhhhHHHhcccccccHHHHHHHHHHHHHHHHH
Confidence 89999955 9999999999999999998764321111000 0011 1125677899999999999
Q ss_pred HHHHHHHhhccHHHHHHHHHHhHhcCCcchHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHhhhcccCCCCCccceee
Q 006106 306 ELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSV 385 (661)
Q Consensus 306 ~l~~ll~~~~~L~~hL~~l~~~fLL~~Gdf~~~f~~~~~~~L~~~~~~~~~~~L~~~l~~al~~s~~~~d~~~~~l~~~l 385 (661)
.++++++++++|.+||+++|+||||++|||+..|++.+++.+.++..+.+...++..++.++........+...... .
T Consensus 304 ~l~~~l~~~~~l~~~l~~l~~~~Ll~~gdf~~~f~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 381 (542)
T PF04130_consen 304 SLLDLLFEDYNLLEHLKALRDFFLLGDGDFADSFLESLFEKLESPSSRSSDSNLNSILQEALRASSADWSDESSNLR-S- 381 (542)
T ss_dssp HHHHHHHHHS-HHHHHHHHHHHTT---HHHHHHHHHHHHHHHSS---TTHHHHHHHHHHHHHHHTT---TTSGGGEE-E-
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCccccchhhHHHHHHHHHHhCccccccchhhhh-h-
Confidence 99999999999999999999999999999999999999999999888888888888888888765433222100000 0
Q ss_pred ccccHHHHHHhhhccccccCCCCCCCCCCCCCcceeEEEeeeecCCCceeeechhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006106 386 ERSSLLKRMATLKGVEIKTSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGA 465 (661)
Q Consensus 386 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~L~y~v~wPL~lilt~~~l~~Y~~iFr~Ll~lk~~~~~L~~~ 465 (661)
........... ...... ........+.+..+|+.+.|+|++||||++|||+++|.+|++||+|||++|++++.|+++
T Consensus 382 ~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~l~L~y~~~~PL~lilt~~~~~~Y~~IF~~Ll~lk~~~~~L~~~ 458 (542)
T PF04130_consen 382 GEISSSTSLSS--NLSSND-SSSRNSNNSSSLEGWDALTLSYKVPWPLNLILTPSVMEKYNRIFRFLLQLKRAEWALQSV 458 (542)
T ss_dssp ---------------------------------TTTTEEEEE---TTGGGTS-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccchh--hhhhhh-hhcccccccccccccceeEEEecCCccHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000000000 000000 001112345678999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcc-cc----CCchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHhccCCCHHHHHHHHHHHHHHHH
Q 006106 466 WQVHQGAR-AF----NASGTAISRSSLLCRSMLKFINSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCL 540 (661)
Q Consensus 466 w~~~~~~r-~~----~~~~~~~~~~~~lr~~m~~fv~~l~~Y~~~~VIe~~~~~~~~~l~~~~~~d~l~~~H~~fL~~i~ 540 (661)
|...+..+ .. .......++++.+|++|.|||+++++|++.+||++.|.+|.++++++.|+|+|+++|++||++|+
T Consensus 459 w~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~m~~fv~~l~~y~~~~vI~~~~~~f~~~l~~~~~~d~l~~~H~~yL~~i~ 538 (542)
T PF04130_consen 459 WRQLRRLSRKFGKPDRQSRPQLRRLQILRHRMQHFVNSLQSYLQFDVIEPSWSEFMEKLEKAKSLDELIEAHDDYLDRIL 538 (542)
T ss_dssp HHHHTSGGG--------S-SHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHT---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHH
Confidence 99876421 11 11224577889999999999999999999999999999999999999999999999999999999
Q ss_pred HHhc
Q 006106 541 RECL 544 (661)
Q Consensus 541 ~~~~ 544 (661)
++||
T Consensus 539 ~~~f 542 (542)
T PF04130_consen 539 RRCF 542 (542)
T ss_dssp HHHH
T ss_pred HhhC
Confidence 9997
No 4
>KOG2000 consensus Gamma-tubulin complex, DGRIP91/SPC98 component [Cytoskeleton]
Probab=100.00 E-value=1.5e-53 Score=469.74 Aligned_cols=518 Identities=26% Similarity=0.419 Sum_probs=435.8
Q ss_pred cchHHHHHHHHHHHhcCCCCCceeeecccCCCCCCCCCCCccceEecCC--CCHHHHHHHHHHHHHHhHHHHHHHHhhhh
Q 006106 9 GVQELLVIDDLLSALVGIEGRYISIKRRVNHVHGNDTYDSTVTFQVDAS--MDLALQEMAKRIFPLCESFVLTGQFVESR 86 (661)
Q Consensus 9 ~~~E~~lv~dlL~~L~G~~g~~~~~~~~~~~~~~~~~~~~~~~f~i~~~--~~~sl~~ll~~il~~g~~~~~l~~fv~~~ 86 (661)
.+.|..+|++++++++|+.|.++.++... ..|.+... ++.+...++..+.++|.+|.++..|+...
T Consensus 201 ~i~e~~lvk~v~yvl~gv~~~~~~~~~~~------------~~~~~k~~~~~~~~~~~l~~~lSelg~l~~~~~~~~~~~ 268 (879)
T KOG2000|consen 201 LIKEEDLVKDVLYVLQGVDGALFSFDSEL------------ECFVVKGPVHLPRGISGLLYLLSELGVLYQRVSTFSDQL 268 (879)
T ss_pred cchHHHHHHHHHHHHhhhhhceeecccHH------------hhhhhhccccchhhHHHHHHHHHHHhHHHHhhhhhcchh
Confidence 48999999999999999999999987722 22323222 45677888999999999999999999874
Q ss_pred cCC---CcChHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----------CCcHHHHHHhhhhhHHHHHHHHHHHHHhh
Q 006106 87 SQF---KNGLVNHAFAASLRALLLDYEAMVAQLEHQFRLG-----------RLSIQGLWFYCQPMLGSMQAVSAVIHKAS 152 (661)
Q Consensus 87 ~~~---~~g~~~~Al~~~l~~~L~~y~~~i~~lE~~~~~~-----------~lsL~~l~~~~~~~~~~l~~L~~i~~~~~ 152 (661)
... ..|.+.|||++++++.+++|+..+..+..++... .+++..++.++.....+|++++.+++.+.
T Consensus 269 ~l~~~~~~g~v~qaf~~~l~~elq~y~~~v~~~~s~~~~~~~~~~~~~~~~~~~l~r~la~~~~~~~rl~i~~~l~e~~~ 348 (879)
T KOG2000|consen 269 VLDNPYCIGLVGQAFTAELSDELQYYYALVRSLLTSLSRNKIGIVNLKLVSEVTLLRLLAWIYEPGIRLQILCKLVEHCQ 348 (879)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccceecccccchhhhhhhhhHHHHHHHHhhcchhhhHHHHHHHHhc
Confidence 322 4799999999999999999999999888776321 14677788888788889999999999997
Q ss_pred cCCCchhhHHHHHHHHHHhccCChHHHHHHHHHHHHHhHHHHHHHHHHHhcceEcCCCCcceeeeCCccccccccccchh
Q 006106 153 ANNFTGSAVLNLLQSQAKAMAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDKSLLKESLTQDYDA 232 (661)
Q Consensus 153 ~~~~~g~~lL~~L~~~~~~~~g~~~~~~~l~~ll~~~~~p~~~~l~~Wi~~G~l~D~~~EFfI~~~~~~~~~~~~~~~~~ 232 (661)
..+|+.++..++... .+|++.++.+...++...+.|+.+++..|+..|.+.|+|+||||.+++.... -..+
T Consensus 349 --~~~g~~l~~~~~~f~--~~g~~~i~~i~~~lL~~~~~p~~~~i~~wi~~G~l~D~y~EFfV~~~~~~~~-----~~~d 419 (879)
T KOG2000|consen 349 --VPKGGKLLSAVHEFL--THGDLYVHPIVFSLLHSSCSPYYRMLRNWLLEGELRDTYGEFFVAENPDPGS-----VKDD 419 (879)
T ss_pred --ccCCCcchHHHHHHH--HhCCCcccHHHHHHhhhcchHHHHHHHHHHHcCcccccccceEEeccCCCCc-----cccc
Confidence 778889999998875 5999999999999999999999999999999999999999999999886322 1246
Q ss_pred hhhcccccc-ccCCCcchHH-HHHHHHHhhhHHHHHHHhcCCCCCCCcccc---------cccccCCchhhHHHHHHHHH
Q 006106 233 KYWRQRYSL-KDGIPSFLAN-IAGKILTTGKYLNVMRECGHSAQVPTSENS---------KLLSFGSNHHYLECVKVAYE 301 (661)
Q Consensus 233 ~~W~~~y~l-~~~lP~Fl~~-~a~~Il~~GK~l~~Lr~~~~~~~~p~~e~~---------~~~~f~~~~~~~~~I~~~~~ 301 (661)
.+|++.|.+ .+++|+|++. +|.||+.|||++++|+.|+.+..|-..-.. .-..++.+..+...|+++|.
T Consensus 420 ~lw~~~~~l~~~~lP~Fi~~~~a~kI~l~GKsinfL~~~c~e~~w~~e~~~~~~~~~s~~~~l~~~~~~~l~~~v~~ay~ 499 (879)
T KOG2000|consen 420 RLWHDGYKLRYEMLPSFIPMELAQKILLIGKSINFLRDCCNEQTWSDEIDAKASVEESSTRDLEYASDVGLLGSVSEAYS 499 (879)
T ss_pred cccccccccchhhcccccCHHHHHHHHHhhhHHHHHHHhccccccccchhHHHHHhhhhhhhhccCCChhHHHHHhhhhc
Confidence 899999999 5899999999 999999999999999999886544221000 11234445678889999999
Q ss_pred HHHHHHHHHHHhhccHHHHHHHHHHhHhcCCcchHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHhh-hcccCCCCCc
Q 006106 302 FASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALRST-AAAADPCHED 380 (661)
Q Consensus 302 ~~s~~l~~ll~~~~~L~~hL~~l~~~fLL~~Gdf~~~f~~~~~~~L~~~~~~~~~~~L~~~l~~al~~s-~~~~d~~~~~ 380 (661)
...+++.+++.+.+++.+|+.++|+|.|+|+|||+..+++.+.+.+..|...+..+.|+..++.|+|.+ +++.||-
T Consensus 500 e~inhl~~ll~~~~~l~dh~~a~k~ylllGqgDfid~lme~~~n~l~~p~~tl~~~~lt~~ldsaiR~s~na~yd~~--- 576 (879)
T KOG2000|consen 500 EIVNHLNDILEEVISLLDHNQALKRYLLLGQSDFIDVLMEEKKNILARPRDTLPEHKLTGVLDSAVRSSLNAQYDDR--- 576 (879)
T ss_pred cchHHHHHHHHHHhhHHHHHHHHHHHHHhccchHHHHHHHhhcchhcCcchhhhHhHHHHHHHHHHhhhhccccCCh---
Confidence 999999999999999999999999999999999999999999999999999999999999999999998 7766542
Q ss_pred cceeeccccHHHHHHhhhccccccCCCCCCCCCCCCCcceeEEEeeeecCCCceeeechhHHHHHHHHHHHHHHHHHHHH
Q 006106 381 LTCSVERSSLLKRMATLKGVEIKTSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVER 460 (661)
Q Consensus 381 l~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~L~y~v~wPL~lilt~~~l~~Y~~iFr~Ll~lk~~~~ 460 (661)
+.+.++ |++.. +-..+..|||.+.++|.+.-|+++++|++++.+|-+||+|||++||+++
T Consensus 577 --------~vL~Rl------d~~~~------~~~~gd~gwdvfsl~y~v~~p~s~v~t~~~~~~ylrif~flwrlkR~e~ 636 (879)
T KOG2000|consen 577 --------DVLNRL------DVRVL------KLSHGDDGWDVFSLDYAVDGPLSLVLTRELMLKYLRVFNFLWKLKRVEF 636 (879)
T ss_pred --------hhhhhh------hhHhh------hccCCcccceeeeecceecccHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 122222 22211 1234678999999999999999999999999999999999999999999
Q ss_pred HH-HHHHHHhhh-cc--cc--C----CchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHhccCCC-HHHHH
Q 006106 461 QL-CGAWQVHQG-AR--AF--N----ASGTAISRSSLLCRSMLKFINSLLHYLTFEVLEPNWHVMHNRLQTAKS-IDEVI 529 (661)
Q Consensus 461 ~L-~~~w~~~~~-~r--~~--~----~~~~~~~~~~~lr~~m~~fv~~l~~Y~~~~VIe~~~~~~~~~l~~~~~-~d~l~ 529 (661)
.| ..+|+..++ .+ +. . ......++++.+..+|.||+.++|+|+..+|||.+|+.|..+++++.+ .|..+
T Consensus 637 ~L~~~i~k~~m~~~~~~~~~~~~~i~~~~~~~~r~h~~~~E~~~f~sq~q~y~~f~vie~~wk~l~~~~~~a~~~ld~~~ 716 (879)
T KOG2000|consen 637 LLELHIWKMLMKDCNVAKRDRLLKIPEISCALHRCHILTNEMNHFISQMQYYILFEVIECSWKELSKKMEPARNPLDFQL 716 (879)
T ss_pred HHHHHHHHhhhhhhcccccchhcchHHHHhhhhhhhhHHHHHHHHHHhhhhccccchhhcChHHHHHHHhhccCchHHHH
Confidence 99 789998873 11 11 1 112345677888899999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHHHhcCCC-h---HHHHHHHHHHHHHHHHHHHHHH
Q 006106 530 QHHDFFLDKCLRECLLHL-P---DLLKKVERLKSLCLQYAAATQW 570 (661)
Q Consensus 530 ~~H~~fL~~i~~~~~L~~-~---~l~~~l~~il~~~~~F~~~~~~ 570 (661)
++|+-|+++|.-.|++.+ + .+...+..+++.++.+......
T Consensus 717 eah~~~~~ti~i~~~l~~~~~~~s~~~~l~~l~e~Il~~~~~~~~ 761 (879)
T KOG2000|consen 717 EAHRPFLDTISIRGILQEKASVESIEHSLSALLELILNLAELQSS 761 (879)
T ss_pred hhccccccceeecccccCcccchhhHHhHHHHHHHHhhhhccccc
Confidence 999999999999999996 3 3778888888888888876544
No 5
>KOG4344 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.97 E-value=5.3e-28 Score=249.02 Aligned_cols=608 Identities=18% Similarity=0.181 Sum_probs=390.9
Q ss_pred chHHHHHHHHHHHhcCCCCCceeeecccCCCCCCCCCCCccceEecCCCCHHHHHHHHHHHHHHhHHHHHHHHhhhhcCC
Q 006106 10 VQELLVIDDLLSALVGIEGRYISIKRRVNHVHGNDTYDSTVTFQVDASMDLALQEMAKRIFPLCESFVLTGQFVESRSQF 89 (661)
Q Consensus 10 ~~E~~lv~dlL~~L~G~~g~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~sl~~ll~~il~~g~~~~~l~~fv~~~~~~ 89 (661)
++|...+.+-++.+-|...-|+. .. +.++.. ...-..++....+-.+..++.+.-+|.....|..|+......
T Consensus 290 vtepprifeqlWllggtdkLFif-ih----idgkcq--drhlialphlahpcdnfaleqiaalghnafgLlafidekmgh 362 (1121)
T KOG4344|consen 290 VTEPPRIFEQLWLLGGTDKLFIF-IH----IDGKCQ--DRHLIALPHLAHPCDNFALEQIAALGHNAFGLLAFIDEKMGH 362 (1121)
T ss_pred cCCCCcHHHHHHHhcCCceEEEE-Ee----ecceee--eeeeeeccccccchHHHHHHHHHHhhhhHHHHHhccchhccC
Confidence 56777888889988887665443 33 223221 112222333345667888999999999999999998754211
Q ss_pred C------------------cChHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCCcHHHHHHhhhhhHHH--HHHHHHH
Q 006106 90 K------------------NGLVNHAFAASLRALLLDYEAMVAQLEHQFRL--GRLSIQGLWFYCQPMLGS--MQAVSAV 147 (661)
Q Consensus 90 ~------------------~g~~~~Al~~~l~~~L~~y~~~i~~lE~~~~~--~~lsL~~l~~~~~~~~~~--l~~L~~i 147 (661)
+ +=..-+||--++-+.--.|...++.++.-+.+ +.++|..+.-.+.+.+.. +..+..+
T Consensus 363 epcllleglfmfpkkascafFefdkAfmralvkdfisfkeelaeIckcianndqnflLadVVdaLadmlelrhiidlHkl 442 (1121)
T KOG4344|consen 363 EPCLLLEGLFMFPKKASCAFFEFDKAFMRALVKDFISFKEELAEICKCIANNDQNFLLADVVDALADMLELRHIIDLHKL 442 (1121)
T ss_pred CchHhhhhcccccCccccchhhHHHHHHHHHHHHHhhhHHHHHhHHhhhhcCCceeeHHHHHHHHHHHHhhHHHHHHHHH
Confidence 0 11345666666666666677888888865533 356666666555554433 2222222
Q ss_pred HHH-h-h-c----CCCchhhHHHHHHHHHHh--ccCC--hHH-HHHHHHHHHHHhHHHHHHHHHHHhcceEcCCCCccee
Q 006106 148 IHK-A-S-A----NNFTGSAVLNLLQSQAKA--MAGD--NTV-RSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFI 215 (661)
Q Consensus 148 ~~~-~-~-~----~~~~g~~lL~~L~~~~~~--~~g~--~~~-~~~l~~ll~~~~~p~~~~l~~Wi~~G~l~D~~~EFfI 215 (661)
.-. + + + .......|++-+++.+.. ..|+ +.. ..++-.|......|+++.+..|+..|.+.|...||.|
T Consensus 443 ffhGVaetppdeffavgardLlnpickaiiaYddrgeadeakntlilFsiefeehfpqLqlldElaedghLddGaaefii 522 (1121)
T KOG4344|consen 443 FFHGVAETPPDEFFAVGARDLLNPICKAIIAYDDRGEADEAKNTLILFSIEFEEHFPQLQLLDELAEDGHLDDGAAEFII 522 (1121)
T ss_pred hhcccccCCCchhhhhhHHHHHHHHHHHHHHhccccccCcccceEEEEEEehhhhhHHHHHHHHHHHhccccccHHHHHH
Confidence 211 0 0 0 122335799999987653 2343 222 2234456677889999999999999999999999999
Q ss_pred eeCCccccccccccchhhhh--------------------------ccccccc----cCCCcchHHHHHHHHHhhhHHHH
Q 006106 216 AEDKSLLKESLTQDYDAKYW--------------------------RQRYSLK----DGIPSFLANIAGKILTTGKYLNV 265 (661)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~W--------------------------~~~y~l~----~~lP~Fl~~~a~~Il~~GK~l~~ 265 (661)
.+..+.-- ....+| ..+=... +-+-+|..+.-..|..+||..+.
T Consensus 523 arlknrlv------kHrdfqyaphqklataekfeneekmcdiadassgraagedhlqefiVeFckeedaniimagkrkql 596 (1121)
T KOG4344|consen 523 ARLKNRLV------KHRDFQYAPHQKLATAEKFENEEKMCDIADASSGRAAGEDHLQEFIVEFCKEEDANIIMAGKRKQL 596 (1121)
T ss_pred HHHhcccc------ccchhhhccHHHHHHHHHhhhHHHHhhhhccccccccChHHHHHHHHHHHHHHHHHHHHhhhHHHh
Confidence 88765210 011122 1111111 12335566645578899999999
Q ss_pred HHH--hcCCC----------C-CC----------------------C---------ccc----------------cc---
Q 006106 266 MRE--CGHSA----------Q-VP----------------------T---------SEN----------------SK--- 282 (661)
Q Consensus 266 Lr~--~~~~~----------~-~p----------------------~---------~e~----------------~~--- 282 (661)
+++ |..+. + .| . .|. .+
T Consensus 597 lgnlqcaEddKOGaeafdaeqscpLYqLfLEhalergehgddlcspntLsEmlqankEiqLmklhdeaeshffalddVhc 676 (1121)
T KOG4344|consen 597 LGNLQCAEDDLCLAEAFDAEQSCPLYQLFLEHALERGEHGDDLCSPNTLSEMLQANKEIQLMKLHDEAESHFFALDDVHC 676 (1121)
T ss_pred hccccccchhhHHHHhhhhhhcCcHHHHHHHHHHHhccccccccCHHHHHHHHhhccccchhhHHHHHHHhHHHHhhccC
Confidence 985 32211 0 00 0 000 00
Q ss_pred ---ccccCC----c-------------------------------hhhHHHHHHH--HHHHHHHHHHHHHhhccHHHHHH
Q 006106 283 ---LLSFGS----N-------------------------------HHYLECVKVA--YEFASGELLNLIKERYDLMGKLR 322 (661)
Q Consensus 283 ---~~~f~~----~-------------------------------~~~~~~I~~~--~~~~s~~l~~ll~~~~~L~~hL~ 322 (661)
-..|.. + ..+.+.|+++ +...+..||.-+.+++.+.+.|+
T Consensus 677 gadaidfadepeedkDfedkfacgdvcvdrsqeirncelFaiflqpclephidkQrerLdccgnLManikKdlelsecLQ 756 (1121)
T KOG4344|consen 677 GADAIDFADEPEEDKDFEDKFACGDVCVDRSQEIRNCELFAIFLQPCLEPHIDKQRERLDCCGNLMANIKKDLELSECLQ 756 (1121)
T ss_pred cccccchhhCCCccccHHHhhccccccccccccceehhhHHHHhhhhhhHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 000100 0 1123568888 66678999999999999999999
Q ss_pred HHHHhHhcCCcchHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHhhhcccC---CCCCccceeeccccHHH-HHHhh-
Q 006106 323 SIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALRSTAAAAD---PCHEDLTCSVERSSLLK-RMATL- 397 (661)
Q Consensus 323 ~l~~~fLL~~Gdf~~~f~~~~~~~L~~~~~~~~~~~L~~~l~~al~~s~~~~d---~~~~~l~~~l~~~~l~~-~l~~~- 397 (661)
+.+.||++.+||.+..|.-..+..+.....+.+....+..|+.|..-. .+- |+...+.+.+++-+-.. .|.++
T Consensus 757 akreffeaegedlmrdfwlaiedaIRakckeqnVaekmrfLqeamgle--krYlfvedsnaLfirfEnvdnakkaLgsvl 834 (1121)
T KOG4344|consen 757 AKREFFEAEGEDLMRDFWLAIEDAIRAKCKEQNVAEKMRFLQEAMGLE--KRYLFVEDSNALFIRFENVDNAKKALGSVL 834 (1121)
T ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHhhhh--hcccccccccceeEEeecccchhhhcchhh
Confidence 999999999999999999999988776666666666666677665311 111 23334444444211000 01100
Q ss_pred ----hc------------cccccCCCCCCCCCCCCCcceeEEEeeee--cCCCceeeechhHHHHHHHHHHHHHHHHHHH
Q 006106 398 ----KG------------VEIKTSSDSVDLEQPVSITGLETFSLSYK--VQWPLSIVISRKALTKYQMVFRLLFHCKHVE 459 (661)
Q Consensus 398 ----~~------------~~~~~~~~~~~~~~~~~~~~~d~l~L~y~--v~wPL~lilt~~~l~~Y~~iFr~Ll~lk~~~ 459 (661)
.. +.+...+.- +...-....++|++.|+|+ +|||..+|||+.+|..||.+|+.|+++|++.
T Consensus 835 tsklcavllphypqlahylhvklisqi-nsnsikvveaLdaieLdferpmamhqdiiislacmkdYNqVflLlLkiKWAk 913 (1121)
T KOG4344|consen 835 TSKLCAVLLPHYPQLAHYLHVKLISQI-NSNSIKVVEALDAIELDFERPMAMHQDIIISLACMKDYNQVFLLLLKIKWAK 913 (1121)
T ss_pred hhhhhhhhcccchhhhhHHHHHHHhhh-cccchhhhhhhhheeecccCCcccchheEecHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000000000 0011223678999999999 8999999999999999999999999999999
Q ss_pred HHHHHHHHHh---hh----cc---------------ccCCchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHH
Q 006106 460 RQLCGAWQVH---QG----AR---------------AFNASGTAISRSSLLCRSMLKFINSLLHYLTFEVLEPNWHVMHN 517 (661)
Q Consensus 460 ~~L~~~w~~~---~~----~r---------------~~~~~~~~~~~~~~lr~~m~~fv~~l~~Y~~~~VIe~~~~~~~~ 517 (661)
|.|.++-... +. .| +.++.+..++|...+|.+++|||++|+.|+|..|+++...+|+.
T Consensus 914 wkLdnllfgelvsmaekpRakegliheqdtvaqfcapkdliglqIhRleilRfkLiffiNnLHahIMeailhStgleFeh 993 (1121)
T KOG4344|consen 914 WKLDNLLFGELVSMAEKPRAKEGLIHEQDTVAQFCAPKDLIGLQIHRLEILRFKLIFFINNLHAHIMEAILHSTGLEFEH 993 (1121)
T ss_pred HhhhhhhhhhhhhhhhhhhhhccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHH
Confidence 9999854321 11 01 11224567899999999999999999999999999999999999
Q ss_pred HhccCCCHHHHHHHHHHHHHHHHHHhcCCC--hHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCChhHHH
Q 006106 518 RLQTAKSIDEVIQHHDFFLDKCLRECLLHL--PDLLKKVERLKSLCLQYAAATQWLISSSIDLPKLEEPSDGFSGSEKFK 595 (661)
Q Consensus 518 ~l~~~~~~d~l~~~H~~fL~~i~~~~~L~~--~~l~~~l~~il~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (661)
++++|+|+|+++..|.+||..|...|+|++ +.+..+|.+|+.+++.|+.-|+...+- + +..+.
T Consensus 994 qieEaKdldeLiiiHdehLatihdhClLrdefkafkeAidkifhLalmfadeWqtcasc-m--hagda------------ 1058 (1121)
T KOG4344|consen 994 QIEEAKDLDELIIIHDEHLATIHDHCLLRDEFKAFKEAIDKIFHLALMFADEWQTCASC-M--HAGDA------------ 1058 (1121)
T ss_pred HHhhhcCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchhhhh-h--ccccc------------
Confidence 999999999999999999999999999997 578899999999999999999876531 1 21110
Q ss_pred HHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHHHhccc--ccccchHHHHHHHHhcc
Q 006106 596 RLKLRSLSQVQKVMIRDATVTESILKFEREFNNELQSLGPILSSS--SQAEPYLTHLAQLVLGV 657 (661)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~F~~~~~~l~~~l~~~--~~~~~~~~~l~~ll~rl 657 (661)
-+......++ . .+.-+.-...|.++..+++..++.. ....++...|+-+|..=
T Consensus 1059 ----KOGdesIedd--e---iDdsetqrrsfencalflVaeiekavcRchfmhadiLalllhag 1113 (1121)
T KOG4344|consen 1059 ----LCLDESIEDD--E---IDDSETQRRSFENCALFLVAEIEKAVCRCHFMHADILALLLHAG 1113 (1121)
T ss_pred ----hhhhhhhhcc--c---ccchHHHHhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHhcC
Confidence 0000000000 0 0001112255889999998888763 24677888888777653
No 6
>PF14609 GCP5-Mod21: gamma-Tubulin ring complex non-core subunit mod21
Probab=47.08 E-value=1.7e+02 Score=31.74 Aligned_cols=62 Identities=10% Similarity=0.115 Sum_probs=44.1
Q ss_pred cchHHHHHHHHHHHhcCCCCCceeeecccCCCCCCCCCCCccceEecCCC---CHH-HHHHHHHHHHHHhHHHHHHHHhh
Q 006106 9 GVQELLVIDDLLSALVGIEGRYISIKRRVNHVHGNDTYDSTVTFQVDASM---DLA-LQEMAKRIFPLCESFVLTGQFVE 84 (661)
Q Consensus 9 ~~~E~~lv~dlL~~L~G~~g~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~---~~s-l~~ll~~il~~g~~~~~l~~fv~ 84 (661)
++.|+-+++|.+++|.|++|-+|...+ ..+...|.. +.+ ++.++..+...|..+..+++-..
T Consensus 179 riseqs~~~e~IymL~Gy~~~~f~~ve--------------~~l~~~P~~~~ls~~i~~~il~~~~~~G~~l~~~nqva~ 244 (653)
T PF14609_consen 179 RISEQSWKYEIIYMLMGYQGHIFTCVE--------------EILRHAPQNQHLSYWIQQHILSNFCNWGRELHIMNQVAN 244 (653)
T ss_pred eecccchHHHHHHHHhcCcchhhhhhH--------------hhhcccccccchHHHHHHHHHHHhhccccchHHHHHHhC
Confidence 688999999999999999999996544 233333333 222 46677778888888777775443
No 7
>KOG4344 consensus Uncharacterized conserved protein [Function unknown]
Probab=27.93 E-value=35 Score=37.78 Aligned_cols=123 Identities=12% Similarity=0.033 Sum_probs=79.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC--CcHHHHHHhhhhhHHHHHHHHHHHHHhhcCCCch------hhHHHH
Q 006106 93 LVNHAFAASLRALLLDYEAMVAQLEHQFRLGR--LSIQGLWFYCQPMLGSMQAVSAVIHKASANNFTG------SAVLNL 164 (661)
Q Consensus 93 ~~~~Al~~~l~~~L~~y~~~i~~lE~~~~~~~--lsL~~l~~~~~~~~~~l~~L~~i~~~~~~~~~~g------~~lL~~ 164 (661)
+...-|+-+.+.+|+...+.|...+.....++ -++...-.+++...+.|+.+.+++.... -.+| ..+++.
T Consensus 451 ppdeffavgardLlnpickaiiaYddrgeadeakntlilFsiefeehfpqLqlldElaedgh--LddGaaefiiarlknr 528 (1121)
T KOG4344|consen 451 PPDEFFAVGARDLLNPICKAIIAYDDRGEADEAKNTLILFSIEFEEHFPQLQLLDELAEDGH--LDDGAAEFIIARLKNR 528 (1121)
T ss_pred CCchhhhhhHHHHHHHHHHHHHHhccccccCcccceEEEEEEehhhhhHHHHHHHHHHHhcc--ccccHHHHHHHHHhcc
Confidence 44567899999999999999988887654432 1222111224445556666666665432 1233 345555
Q ss_pred HHHHHHhccCChHHHHHHHHHHHHHhHHHHHHHHHHHhcceEcCCCCcceeeeCC
Q 006106 165 LQSQAKAMAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDK 219 (661)
Q Consensus 165 L~~~~~~~~g~~~~~~~l~~ll~~~~~p~~~~l~~Wi~~G~l~D~~~EFfI~~~~ 219 (661)
++.... .-....+.+.........+-|+..+..|.......|...||+|.-..
T Consensus 529 lvkHrd--fqyaphqklataekfeneekmcdiadassgraagedhlqefiVeFck 581 (1121)
T KOG4344|consen 529 LVKHRD--FQYAPHQKLATAEKFENEEKMCDIADASSGRAAGEDHLQEFIVEFCK 581 (1121)
T ss_pred ccccch--hhhccHHHHHHHHHhhhHHHHhhhhccccccccChHHHHHHHHHHHH
Confidence 555321 11123445566667777889999999999999999999999987543
No 8
>PF13060 DUF3921: Protein of unknown function (DUF3921)
Probab=26.00 E-value=1.2e+02 Score=21.42 Aligned_cols=45 Identities=11% Similarity=0.224 Sum_probs=31.4
Q ss_pred HHHHhhcccccHHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHhcC
Q 006106 501 HYLTFEVLEPNWHVMHNRLQT-AKSIDEVIQHHDFFLDKCLRECLL 545 (661)
Q Consensus 501 ~Y~~~~VIe~~~~~~~~~l~~-~~~~d~l~~~H~~fL~~i~~~~~L 545 (661)
--+-...|+..+.++-+.++. ..-.|++.++.++||+.+....++
T Consensus 6 lsmiqkaih~tydelgkei~~~g~~~d~i~kaqeeylsals~et~i 51 (58)
T PF13060_consen 6 LSMIQKAIHRTYDELGKEIDLQGVIADEIQKAQEEYLSALSHETLI 51 (58)
T ss_pred HHHHHHHHHHhHHHHhHHhhhcchHHHHHHHHHHHHHHHhhHHHHH
Confidence 334445666777777777753 234799999999999987665544
No 9
>KOG2000 consensus Gamma-tubulin complex, DGRIP91/SPC98 component [Cytoskeleton]
Probab=24.54 E-value=1.1e+02 Score=36.18 Aligned_cols=121 Identities=10% Similarity=-0.072 Sum_probs=88.2
Q ss_pred CcceeEEEeeeecCCCceeeechhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-h-ccccCCchhhHHhHHHHHHHHHH
Q 006106 417 ITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQ-G-ARAFNASGTAISRSSLLCRSMLK 494 (661)
Q Consensus 417 ~~~~d~l~L~y~v~wPL~lilt~~~l~~Y~~iFr~Ll~lk~~~~~L~~~w~~~~-~-~r~~~~~~~~~~~~~~lr~~m~~ 494 (661)
..++|.-...|++..++.-.++.-.- ..+|..+|++.+-.|.+...|.... . ++....... -.-..|..|.|
T Consensus 589 ~~~gd~gwdvfsl~y~v~~p~s~v~t---~~~~~~ylrif~flwrlkR~e~~L~~~i~k~~m~~~~---~~~~~~~~~i~ 662 (879)
T KOG2000|consen 589 LSHGDDGWDVFSLDYAVDGPLSLVLT---RELMLKYLRVFNFLWKLKRVEFLLELHIWKMLMKDCN---VAKRDRLLKIP 662 (879)
T ss_pred ccCCcccceeeeecceecccHHHHhh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhc---ccccchhcchH
Confidence 46778889999999999998875332 8999999999999999999998773 2 221110000 02356678899
Q ss_pred HHHHHHHHHHhhcccccHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhcCC
Q 006106 495 FINSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLLH 546 (661)
Q Consensus 495 fv~~l~~Y~~~~VIe~~~~~~~~~l~~~~~~d~l~~~H~~fL~~i~~~~~L~ 546 (661)
++.+...++...+.|-+ .|..+++--..++ +++.|-.++...+..-...
T Consensus 663 ~~~~~~~r~h~~~~E~~--~f~sq~q~y~~f~-vie~~wk~l~~~~~~a~~~ 711 (879)
T KOG2000|consen 663 EISCALHRCHILTNEMN--HFISQMQYYILFE-VIECSWKELSKKMEPARNP 711 (879)
T ss_pred HHHhhhhhhhhHHHHHH--HHHHhhhhccccc-hhhcChHHHHHHHhhccCc
Confidence 99999999988776644 4455555445555 8999999998888776663
No 10
>PLN00032 DNA-directed RNA polymerase; Provisional
Probab=22.46 E-value=94 Score=24.13 Aligned_cols=46 Identities=22% Similarity=0.355 Sum_probs=33.7
Q ss_pred HhhcccccHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhcCCChHH
Q 006106 504 TFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLLHLPDL 550 (661)
Q Consensus 504 ~~~VIe~~~~~~~~~l~~~~~~d~l~~~H~~fL~~i~~~~~L~~~~l 550 (661)
...||...|.+|.+.+++-.|..++...-. .=..|.+..||+..++
T Consensus 10 CGkvig~~we~y~~~~~~g~~~~~~LD~LG-~~RYCCRRMllsHvdl 55 (71)
T PLN00032 10 CGKVIGNKWDTYLDLLQADYSEGDALDALG-LVRYCCRRMLMTHVDL 55 (71)
T ss_pred CCCCcHHHHHHHHHHHhcCCCHHHHHHHhC-chhhhhhhHHHHHHHH
Confidence 456899999999999988888877665533 2245677788876555
No 11
>PF08673 RsbU_N: Phosphoserine phosphatase RsbU, N-terminal domain; InterPro: IPR014787 The phosphoserine phosphatase RsbU acts as a positive regulator of the general stress-response factor of Gram-positive organisms, sigma-B. RsbU dephosphorylates rsbV in response to environmental stress conveyed from the rsbXST module. The phosphatase activity of RsbU is stimulated during the stress response by associating with the RsbT kinase. This association leads to the induction of sigmaB activity. The N-terminal domain forms a helix-swapped dimer that is otherwise similar to the KaiA domain dimer. Deletions in the N-terminal domain are deleterious to the activity of RsbU. The C-terminal domain of RsbU is similar to the catalytic domains of PP2C-type phosphatases [].; PDB: 2J6Y_D 2J6Z_A 2J70_A 1W53_A.
Probab=21.48 E-value=3.1e+02 Score=21.82 Aligned_cols=43 Identities=16% Similarity=0.277 Sum_probs=28.2
Q ss_pred hccCCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Q 006106 519 LQTAKSIDEVIQHHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQY 564 (661)
Q Consensus 519 l~~~~~~d~l~~~H~~fL~~i~~~~~L~~~~l~~~l~~il~~~~~F 564 (661)
+++.-++++|+..|.+++..+...+ ...+...++=++.+..-|
T Consensus 31 i~~~I~PEeIv~iH~~~v~~l~~~~---~~~v~~sld~LlEvm~~y 73 (77)
T PF08673_consen 31 IEKDISPEEIVEIHKSAVQELSPSL---PEDVLDSLDFLLEVMIGY 73 (77)
T ss_dssp HHTT--HHHHHHHHHHHHHHH-TTS----HHHHHHHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHHHHHHHcccc---HHHHHHHHHHHHHHHHHc
Confidence 3455689999999999999887665 556666666666655544
No 12
>PF14689 SPOB_a: Sensor_kinase_SpoOB-type, alpha-helical domain; PDB: 1F51_C 2FTK_B 1IXM_B.
Probab=21.14 E-value=3.5e+02 Score=20.28 Aligned_cols=37 Identities=19% Similarity=0.280 Sum_probs=30.1
Q ss_pred HhhccHHHHHHHHHHhHhcCCcchHHHHHHHHHHHHh
Q 006106 312 KERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELM 348 (661)
Q Consensus 312 ~~~~~L~~hL~~l~~~fLL~~Gdf~~~f~~~~~~~L~ 348 (661)
...|++..||+.+..+.=+|+.|=+...++.+..++.
T Consensus 18 ~~RHD~~NhLqvI~gllqlg~~~~a~eYi~~~~~~~~ 54 (62)
T PF14689_consen 18 AQRHDFLNHLQVIYGLLQLGKYEEAKEYIKELSKDLQ 54 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 3579999999999999999999888888877765543
No 13
>PF15027 DUF4525: Domain of unknown function (DUF4525)
Probab=20.69 E-value=4.8e+02 Score=22.83 Aligned_cols=59 Identities=17% Similarity=0.258 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhhhcC---CCcChHHHHH---HHHHHHHHHHHHHHHHHHHHhh
Q 006106 60 LALQEMAKRIFPLCESFVLTGQFVESRSQ---FKNGLVNHAF---AASLRALLLDYEAMVAQLEHQF 120 (661)
Q Consensus 60 ~sl~~ll~~il~~g~~~~~l~~fv~~~~~---~~~g~~~~Al---~~~l~~~L~~y~~~i~~lE~~~ 120 (661)
+|...+-++|+.+...| ++...++... .++|..+.+. -.++..+|.+..+.+..||.++
T Consensus 38 ~ss~~LR~QILdLSkrY--VKaLAeEn~~~~dgp~~~smagYaDLKktiAVLLddiLqRl~kLE~kv 102 (138)
T PF15027_consen 38 QSSAELREQILDLSKRY--VKALAEENKNVVDGPYGASMAGYADLKKTIAVLLDDILQRLVKLESKV 102 (138)
T ss_pred cChHHHHHHHHHHHHHH--HHHHHHHcCCCCCCCcchhhHHHHHHhhhhhhhhhHHHHHHHHHHHHH
Confidence 34446667888887655 3444444322 2344444444 3456677888888888888765
Done!