Query 006110
Match_columns 661
No_of_seqs 169 out of 831
Neff 4.9
Searched_HMMs 46136
Date Thu Mar 28 18:29:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006110.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006110hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00151 potassium transporter 100.0 2E-209 4E-214 1751.6 57.3 656 1-661 189-852 (852)
2 PLN00148 potassium transporter 100.0 1E-208 2E-213 1747.0 54.6 658 1-661 113-785 (785)
3 PLN00149 potassium transporter 100.0 1E-206 3E-211 1731.8 55.7 654 1-661 109-779 (779)
4 PLN00150 potassium ion transpo 100.0 2E-205 3E-210 1720.4 56.2 645 1-661 133-779 (779)
5 TIGR00794 kup potassium uptake 100.0 1E-196 2E-201 1641.6 53.4 603 1-661 84-688 (688)
6 PRK10745 trkD potassium transp 100.0 2E-184 3E-189 1523.9 46.1 527 38-661 96-622 (622)
7 COG3158 Kup K+ transporter [In 100.0 2E-176 4E-181 1427.2 43.3 527 38-661 101-627 (627)
8 PF02705 K_trans: K+ potassium 100.0 3E-167 5E-172 1375.9 37.7 459 29-491 76-534 (534)
9 TIGR00911 2A0308 L-type amino 92.7 0.43 9.4E-06 53.8 9.0 86 86-175 165-254 (501)
10 COG0531 PotE Amino acid transp 86.4 9.7 0.00021 41.7 12.8 179 85-267 133-324 (466)
11 TIGR00909 2A0306 amino acid tr 81.4 16 0.00035 40.0 12.0 212 86-315 133-359 (429)
12 PRK10435 cadB lysine/cadaverin 78.5 40 0.00086 37.5 13.9 23 89-111 124-146 (435)
13 TIGR00930 2a30 K-Cl cotranspor 77.9 86 0.0019 39.2 17.6 25 86-110 203-227 (953)
14 PRK15049 L-asparagine permease 77.3 27 0.00058 39.9 12.4 22 89-110 147-168 (499)
15 PRK10655 potE putrescine trans 76.9 59 0.0013 36.0 14.6 41 89-129 126-169 (438)
16 PF13520 AA_permease_2: Amino 76.6 15 0.00032 40.1 9.8 223 86-324 118-367 (426)
17 TIGR03813 put_Glu_GABA_T putat 74.8 35 0.00075 38.4 12.3 19 367-385 434-452 (474)
18 TIGR00907 2A0304 amino acid pe 74.2 40 0.00086 37.9 12.6 22 366-387 453-474 (482)
19 PF14362 DUF4407: Domain of un 66.9 60 0.0013 34.5 11.4 53 306-358 13-69 (301)
20 TIGR00906 2A0303 cationic amin 64.5 1.5E+02 0.0032 34.7 14.8 44 86-129 161-207 (557)
21 TIGR03810 arg_ornith_anti argi 63.9 1.8E+02 0.0038 32.8 14.9 44 225-268 274-317 (468)
22 PRK10238 aromatic amino acid t 62.2 1E+02 0.0022 34.7 12.6 113 89-205 129-250 (456)
23 TIGR00908 2A0305 ethanolamine 62.1 1.1E+02 0.0024 33.9 12.8 24 88-111 123-146 (442)
24 PRK11021 putative transporter; 60.0 2.5E+02 0.0054 30.9 14.9 28 86-113 115-142 (410)
25 TIGR00905 2A0302 transporter, 57.5 1.1E+02 0.0024 34.4 12.0 24 88-111 131-154 (473)
26 PRK10249 phenylalanine transpo 56.9 1.4E+02 0.0031 33.5 12.7 103 89-193 138-248 (458)
27 PRK10746 putative transport pr 52.1 2.8E+02 0.006 31.4 14.0 25 367-391 427-451 (461)
28 PF06570 DUF1129: Protein of u 51.9 62 0.0013 32.8 7.9 21 366-386 179-199 (206)
29 COG4059 MtrE Tetrahydromethano 51.6 15 0.00032 38.4 3.4 31 363-393 258-288 (304)
30 PRK11357 frlA putative fructos 44.1 1.4E+02 0.0031 33.1 10.0 43 88-130 129-174 (445)
31 TIGR00910 2A0307_GadC glutamat 43.5 3.2E+02 0.007 31.3 13.0 48 158-205 196-245 (507)
32 PRK11049 D-alanine/D-serine/gl 43.2 3.8E+02 0.0082 30.2 13.3 108 160-268 215-333 (469)
33 TIGR00913 2A0310 amino acid pe 42.3 2.8E+02 0.006 31.1 12.0 32 162-193 203-236 (478)
34 KOG3643 GABA receptor [Signal 40.6 24 0.00052 40.2 3.2 101 246-350 209-319 (459)
35 KOG4742 Predicted chitinase [G 39.4 13 0.00028 40.0 0.8 33 179-220 172-210 (286)
36 TIGR01773 GABAperm gamma-amino 38.2 6E+02 0.013 28.3 15.8 101 88-191 128-238 (452)
37 PRK10580 proY putative proline 34.9 4.2E+02 0.0092 29.6 11.9 99 90-192 127-237 (457)
38 PRK10644 arginine:agmatin anti 33.1 2.9E+02 0.0063 30.8 10.2 23 89-111 128-150 (445)
39 PRK11387 S-methylmethionine tr 32.8 7.6E+02 0.016 27.8 13.9 21 90-110 133-153 (471)
40 KOG3145 Cystine transporter Cy 32.6 38 0.00082 37.0 3.0 36 152-188 288-340 (372)
41 TIGR02121 Na_Pro_sym sodium/pr 27.6 7.7E+02 0.017 28.1 12.6 39 225-267 315-353 (487)
42 TIGR03428 ureacarb_perm permea 26.3 9.7E+02 0.021 27.0 18.6 25 86-110 144-168 (475)
43 PF05313 Pox_P21: Poxvirus P21 24.8 1.4E+02 0.0029 30.6 5.1 60 189-259 88-148 (189)
44 PF05545 FixQ: Cbb3-type cytoc 24.3 81 0.0018 24.9 2.9 26 378-403 22-47 (49)
45 TIGR01940 nqrE NADH:ubiquinone 21.5 2.6E+02 0.0057 28.8 6.6 47 287-333 14-62 (200)
46 PF00324 AA_permease: Amino ac 20.8 75 0.0016 35.7 2.9 36 158-193 202-239 (478)
47 PF11827 DUF3347: Protein of u 20.7 42 0.00091 33.4 0.7 20 204-223 144-163 (174)
48 PRK05151 electron transport co 20.2 3.2E+02 0.007 28.0 6.9 47 287-333 15-63 (193)
No 1
>PLN00151 potassium transporter; Provisional
Probab=100.00 E-value=2e-209 Score=1751.62 Aligned_cols=656 Identities=71% Similarity=1.186 Sum_probs=589.9
Q ss_pred CCCCCcchhhhccccccCCCChhhHHHHHHHHHHhhccchhhHHHHHHHhhhhhhhcCccccccceeeccccccccccCC
Q 006110 1 MLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHG 80 (661)
Q Consensus 1 l~~n~~~~d~~~s~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~l~G~al~~gDgviTPAiSVLSAveGl~v~~p~ 80 (661)
++||||++|+++|+|+++.++++++++.++|++||+|+++|++++++|++|+||+||||+||||||||||||||+++.|+
T Consensus 189 llpnq~~~de~ls~~~~~~~~~~~~~~~~~k~~lE~s~~~k~~ll~l~l~GtamviGDGvlTPAISVLSAVeGL~v~~p~ 268 (852)
T PLN00151 189 LLPNQLPSDERISSFRLKLPTPELERSLKIKERLETSSLLKKLLLLLVLAGTSMVIGDGVLTPAMSVMSAVSGLKVGVPG 268 (852)
T ss_pred ccccccchHhhhhhhcccCCccccchhHHHHHHhhhhHHHHHHHHHHHHHhHHHHhcccccccchhhhhhhccccccCCc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeehhHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHhhhhhhccccCcceeeecChHHHHHHHHhcCcchhh
Q 006110 81 FGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWS 160 (661)
Q Consensus 81 ~~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~FgPIm~~WF~~i~~~Gi~ni~~~~p~Vl~AlnP~yai~f~~~~~~~~~~ 160 (661)
+++++||||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+||||+|+++||++||.+||.
T Consensus 269 l~~~~VV~Is~~ILv~LF~~Q~~GT~kVg~~FgPImllWFl~i~~iGiynI~~~~p~Vl~AlnP~Y~~~Ff~~~~~~gw~ 348 (852)
T PLN00151 269 FGQDAVVMISVAFLVILFSVQRFGTSKVGFAFGPALALWFCSLGGIGIYNLVKYDSSVFRAFNPVYIYYFFKRNSTKAWS 348 (852)
T ss_pred CCCCeehhHHHHHHHHHHHHHhccchhhhhhhccHHHHHHHHHHHHHHHHHHhcCHHHHhhhCHHHHHHHHHhCCCceEE
Confidence 98899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceeeeecchhhhhccCCCCCccchhhhhhhhHhHHHHHhhccchhhhccCcccccccccccccCcchHHHHHHHHHH
Q 006110 161 ALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALA 240 (661)
Q Consensus 161 ~LG~VvL~vTG~EALyADmGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~Ll~~p~~~~npFf~~~P~~~~~P~~vlAtlA 240 (661)
+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++++||||+++|+|++||+|++||+|
T Consensus 349 ~LGgVvLciTGaEALfADLGHFg~~sIqiaw~~~V~P~LlL~Y~GQaA~L~~~p~~~~npFy~svP~~~~wP~~vlAtlA 428 (852)
T PLN00151 349 ALGGCVLCATGSEAMFADLGYFSVRSIQLAFTCLVLPCLLLAYMGQAAYLMKNPDSAEQIFFSSVPSSLFWPVFLIANLA 428 (852)
T ss_pred EecceeeeeccchhhhcccCCCCccceeeeehhhHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhchhhHHHHHHHhCCCcceeEEeCCCccCCccccchHHHHHHHHhheeeEEeCCchhHHhhhhchhhhHHH
Q 006110 241 AMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVML 320 (661)
Q Consensus 241 tIIASQA~ISg~FSl~~Qai~Lg~~Pr~~i~hTS~~~~GQIYiP~vNw~Lm~~~i~vv~~F~~s~~l~~AYGiAVt~~M~ 320 (661)
|||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||||||+||++||+
T Consensus 429 aIIASQA~ISgtFSii~Qai~Lg~fPRvkIvHTS~~~~GQIYIP~vNw~Lmv~~i~v~l~F~~s~~l~~AYGiAV~~vM~ 508 (852)
T PLN00151 429 ALIASRAMTTATFSCIKQSMALGCFPRLKIIHTSRKFMGQIYIPVINWFLLVMCLVVVCSFRSITDIGNAYGIAEVGVMM 508 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHHHHhheeeecCHHHHHHHhhhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhHhcccCCccHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcC
Q 006110 321 VSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKI 400 (661)
Q Consensus 321 iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~f~sanl~Kv~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~~~~~~ 400 (661)
+||+|+++||+.+|||+++++++|+++|+++|++|||||+.||+||||+||++|++++++|++||||++++++++.++++
T Consensus 509 iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sA~l~Ki~~GGW~Pl~la~v~~~iM~~W~yG~~~~~~~~~~~~v 588 (852)
T PLN00151 509 VSTILVTLVMLLIWQTNIFLVLCFPVVFLSVELVFFSSVLSSVGDGGWIPLVFASVFLCIMYIWNYGSKLKYQSEVRQKL 588 (852)
T ss_pred HHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHhcCCCCCcccceeEEEeecCCCCcchHHHHHhhhcCccceEEEEEEEEEecccccCCCceEEEEEecCCCCcE
Q 006110 401 SMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHM 480 (661)
Q Consensus 401 ~~~~~~~~~~~~~~~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lh~~vvfl~v~~~~~P~V~~~eR~~v~~~~~~~~~~ 480 (661)
|++++.++.++.++.||||+|+|||++.+|+|++|.||++|||++||++||||||++|+|+||++||+++++++++++|+
T Consensus 589 s~~~~~~L~~~~~~~RVpGiglf~t~~~~gvP~~f~h~i~~~~alHe~~Vfv~ik~~~vP~V~~~eR~lv~ri~~~~~~~ 668 (852)
T PLN00151 589 SMDLMRELGSNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHM 668 (852)
T ss_pred CHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEcCCCCCCE
Confidence 99999999888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEeeecccccChhHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccccccccCCCCC-CCCCCCcccccccccccc
Q 006110 481 FRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDPE-ASGSYGTEELKIPLMHER 559 (661)
Q Consensus 481 ~r~~~ryGy~d~~~~~~~~Fe~~lv~~L~~fi~~e~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~p~~~~~ 559 (661)
|||++||||||..+.+++|||++|+++|++|||.|+++..++.+..+..+++.+....... .++. +..+.+.+.....
T Consensus 669 yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~fi~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 747 (852)
T PLN00151 669 FRCIARYGYKDVRKENHQAFEQLLIESLEKFIRREAQERALESDGNDDTDDEDSVTSSRVLIAPNG-SVYSLGVPLLADY 747 (852)
T ss_pred EEEEEEEeecccccccchHHHHHHHHHHHHHHHhhhhhccccccccccccccccccccccccCCCc-ccccccccccccc
Confidence 9999999999998634899999999999999999975321211000000000000000000 0000 0000011100000
Q ss_pred cccc---CCCCCcccc----cccccCCCccCCCCCCHHHhHHHHHHhHhcCcEEEEeeceEEecCCcchhHHHHHHHHHH
Q 006110 560 RFDE---SGTSASEET----TSALPSSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYA 632 (661)
Q Consensus 560 ~~~~---e~~~~~~~~----~~~v~~~~~~~~~~~~~~~el~~L~~A~e~gvvY~lGr~~v~a~~~S~~~kKi~i~~lf~ 632 (661)
.+.. .....+.+. .++++ ..+.++++++|+++|++|||+|++|++||++|++|++|+++||+++|++|+
T Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~El~~l~~a~e~Gv~yilG~~~v~a~~~S~~~Kk~~in~~Y~ 823 (852)
T PLN00151 748 RLTSKPIPEASTSEEVSPVLPSSSM----SSDEDQSLEYELSFIREAKESGVVYLLGHGDVRARKNSWFIKKLVINYFYA 823 (852)
T ss_pred ccccccccccccccccccccccccc----ccccCccHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHH
Confidence 0000 000000000 01111 122246789999999999999999999999999999999999999999999
Q ss_pred HHHHhccccccccccCCCCEEEEeeEEEC
Q 006110 633 FLRRNCRAGAANMSVPHMNILQVGMTYMV 661 (661)
Q Consensus 633 fLrrN~r~~~~~l~IP~~rlvEvG~~~ei 661 (661)
|||||||++...|+|||+|++||||+|+|
T Consensus 824 fLRkN~R~~~~~L~iP~~~lleVGm~Y~v 852 (852)
T PLN00151 824 FLRKNCRRGIANLSVPHSNIMQVGMTYMV 852 (852)
T ss_pred HHHHhccCcccccCCChHHeEEeceEEEC
Confidence 99999999999999999999999999997
No 2
>PLN00148 potassium transporter; Provisional
Probab=100.00 E-value=1.1e-208 Score=1747.01 Aligned_cols=658 Identities=45% Similarity=0.850 Sum_probs=587.8
Q ss_pred CCCCCcchhhhccccccCCCChhhHHHHHHHHHHhhccchhhHHHHHHHhhhhhhhcCccccccceeeccccccccccCC
Q 006110 1 MLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHG 80 (661)
Q Consensus 1 l~~n~~~~d~~~s~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~l~G~al~~gDgviTPAiSVLSAveGl~v~~p~ 80 (661)
++||||++|+++|+|+.+.++.+ +++.++|++||+|+++|++++++|++|+||+||||+||||||||||||||+++.|+
T Consensus 113 ~~pn~~~~d~~ls~~~~~~~~~~-~~~~~~k~~lE~~~~~~~~ll~l~l~G~am~~gDgvlTPAISVLSAVeGl~v~~p~ 191 (785)
T PLN00148 113 LLPNQQAADEELSAYKYGPSTQT-VGSSPLKRFLEKHKRLRTALLLVVLFGACMVIGDGVLTPAISVLSSVSGLQVTETK 191 (785)
T ss_pred cCccchhhhhhhhhhccCccccc-hhhhHHHHHhhhchHHHHHHHHHHHHHHHHHHhccccchhHHHHHHhccceecCCC
Confidence 47999999999999988765544 56678999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeehhHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHhhhhhhccccCcceeeecChHHHHHHHHhcCcchhh
Q 006110 81 FGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWS 160 (661)
Q Consensus 81 ~~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~FgPIm~~WF~~i~~~Gi~ni~~~~p~Vl~AlnP~yai~f~~~~~~~~~~ 160 (661)
+++++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+|+||+||++||.+||++||.
T Consensus 192 ~~~~~vv~is~~ILv~LF~vQ~~GT~kVg~~FgPIm~lWf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~ 271 (785)
T PLN00148 192 LTDGELVLLACVILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGSIGLYNIIHWNPKIIHALSPYYIIKFFRVTGKDGWI 271 (785)
T ss_pred CCCCeehhHHHHHHHHHHHHhccccHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCHHHhhhcCHHHHHHHHHhCCCceEE
Confidence 98899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceeeeecchhhhhccCCCCCccchhhhhhhhHhHHHHHhhccchhhhccCcccccccccccccCcchHHHHHHHHHH
Q 006110 161 ALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALA 240 (661)
Q Consensus 161 ~LG~VvL~vTG~EALyADmGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~Ll~~p~~~~npFf~~~P~~~~~P~~vlAtlA 240 (661)
+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++.+||||+++|+|++||++++||+|
T Consensus 272 ~LGgV~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~L~L~Y~GQaA~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlA 351 (785)
T PLN00148 272 SLGGILLSITGTEAMFADLGHFTAASIRLAFATVIYPCLVVQYMGQAAFLSKNIPSIPNSFYDSIPDPVFWPVFVIATLA 351 (785)
T ss_pred eecchheeccchhhhhhhccCCCccceEEeeeehHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhchhhHHHHHHHhCCCcceeEEeCCCccCCccccchHHHHHHHHhheeeEEeCCchhHHhhhhchhhhHHH
Q 006110 241 AMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVML 320 (661)
Q Consensus 241 tIIASQA~ISg~FSl~~Qai~Lg~~Pr~~i~hTS~~~~GQIYiP~vNw~Lm~~~i~vv~~F~~s~~l~~AYGiAVt~~M~ 320 (661)
|||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||||||+||++||+
T Consensus 352 tIIASQA~ISg~FSi~~Qai~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~la~AYGiAV~~vM~ 431 (785)
T PLN00148 352 AIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLAVTIGFRDTTLIGNAYGLACMTVMF 431 (785)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHHhheeeccchhHHHhhhhheeeHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhHhcccCCccHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcC
Q 006110 321 VSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKI 400 (661)
Q Consensus 321 iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~f~sanl~Kv~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~~~~~~ 400 (661)
+||+|+++||+.+|||+++++++|+++|+++|++|||||+.||+||||+||++|++++++|++||||++++++++.++++
T Consensus 432 iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~~ 511 (785)
T PLN00148 432 ITTFLMALVIIFVWQKSIILAALFLLFFGFIEGVYLSAALMKVPQGGWVPLVLSAIFMSIMYIWHYGTRKKYNFDLHNKV 511 (785)
T ss_pred HHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHhcCCCCCcccceeEEEeecCCCCcchHHHHHhhhcCccceEEEEEEEEEecccccCCCceEEEEEecCCCCcE
Q 006110 401 SMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHM 480 (661)
Q Consensus 401 ~~~~~~~~~~~~~~~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lh~~vvfl~v~~~~~P~V~~~eR~~v~~~~~~~~~~ 480 (661)
|++++.++.++.++.||||+|+|||++.+|+|++|.||++|||++||++||||||++|+|+||++||+++++++++++++
T Consensus 512 ~~~~~~~l~~~~~~~RVpG~~vf~t~~~~gvP~~f~h~~~~~~~lHe~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~yr~ 591 (785)
T PLN00148 512 SLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRM 591 (785)
T ss_pred CHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCCceE
Confidence 99999888777778899999999999999999999999999999999999999999999999999999999999988899
Q ss_pred EEEEEEEeeecccccChhHHHHHHHHHHHHHHHHHHHHHHHh-hhcccCccccccccC--------CCCCCCCC--CCcc
Q 006110 481 FRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALE-RNLLESDLDSVSVAS--------RDPEASGS--YGTE 549 (661)
Q Consensus 481 ~r~~~ryGy~d~~~~~~~~Fe~~lv~~L~~fi~~e~~~~~l~-~~~~~~~~~~~~~~~--------~~~~~~~~--~~~~ 549 (661)
|||++||||||..++ ++|||++|+++|++|||.|+.+...+ .+.++. ++..+..+ +....+++ .+..
T Consensus 592 ~r~vvryGy~d~~~~-~~dFe~~Lv~~L~~FIr~e~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (785)
T PLN00148 592 YRCIVRYGYKDIQRD-DGDFENMLVQSIAEFIQMEAEEPQSSASESSSN-DGRMAVISTRDVQSSSLLMVSEQELADIDD 669 (785)
T ss_pred EEEEEEEccCccccc-chHHHHHHHHHHHHHHHhhhhcccccccccccc-cccccccccccccccccccccccccccccc
Confidence 999999999999876 99999999999999999997421000 000000 00000000 00000000 0000
Q ss_pred ccccc---cccccccccCCCCCccccccccc-CCCccCCCCCCHHHhHHHHHHhHhcCcEEEEeeceEEecCCcchhHHH
Q 006110 550 ELKIP---LMHERRFDESGTSASEETTSALP-SSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKL 625 (661)
Q Consensus 550 s~~~p---~~~~~~~~~e~~~~~~~~~~~v~-~~~~~~~~~~~~~~el~~L~~A~e~gvvY~lGr~~v~a~~~S~~~kKi 625 (661)
+.++. ......+..|.++++..++++++ ..+.+.+.+++.++|+++|++|||+||+|++||++|++|++|+++||+
T Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~~L~~A~eaGVvYIlG~s~v~Ar~~Ss~~KKi 749 (785)
T PLN00148 670 SIQSSKSLTLQSLQSAYEDENPGQSRRRRVRFQLPENPGMDPSVREELMDLIEAKEAGVAYIMGHSYVKARRSSSFLKKL 749 (785)
T ss_pred ccccccccccccccccccccccccccccceeecccccccccchHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHH
Confidence 00000 00000111111111222334455 222333345788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccccccCCCCEEEEeeEEEC
Q 006110 626 VINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV 661 (661)
Q Consensus 626 ~i~~lf~fLrrN~r~~~~~l~IP~~rlvEvG~~~ei 661 (661)
++|++|+|||||||++.+.|+|||+|++||||+|||
T Consensus 750 vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGM~Y~V 785 (785)
T PLN00148 750 AIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 785 (785)
T ss_pred HHHHHHHHHHHhccCcccccCCChHHeEEcceEEEC
Confidence 999999999999999999999999999999999997
No 3
>PLN00149 potassium transporter; Provisional
Probab=100.00 E-value=1.3e-206 Score=1731.76 Aligned_cols=654 Identities=47% Similarity=0.819 Sum_probs=581.4
Q ss_pred CCCCCcchhhhccccccCCCC---hhhHHHHHHHHHHhhccchhhHHHHHHHhhhhhhhcCccccccceeeccccccccc
Q 006110 1 MLPNRQPADEQISSFRLKLPT---PELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQGE 77 (661)
Q Consensus 1 l~~n~~~~d~~~s~~~~~~~~---~~~~~~~~~~~~le~~~~~~~~l~~l~l~G~al~~gDgviTPAiSVLSAveGl~v~ 77 (661)
++||||++|+++|+|+++.++ ++.+++.++|++||+++.+|++++++|++|+||+||||+||||||||||||||+++
T Consensus 109 l~pn~~~~d~~ls~~~~~~~~~~~~~~~~~~~~k~~le~~~~~~~~ll~l~l~G~~m~igDgvlTPAISVLSAVeGl~v~ 188 (779)
T PLN00149 109 SLPNCQLADEELSEYKKDSGSSSMPLSGFGSSLKSTLEKHRVLQRFLLVLALIGTCMVIGDGVLTPAISVFSAVSGLELS 188 (779)
T ss_pred CCccccchhhhhhhhhccccccccccchhhhHHHHHHhhhhHHHHHHHHHHHHHHHHHHhccccchhHHHHHHhhccccc
Confidence 589999999999999887654 33345678999999999899999999999999999999999999999999999999
Q ss_pred cCCCCCcee-ehhHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHhhhhhhccccCcceeeecChHHHHHHHHhcCc
Q 006110 78 IHGFGESAL-VIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGK 156 (661)
Q Consensus 78 ~p~~~~~~V-v~is~~ILv~LF~iQ~~GT~kvg~~FgPIm~~WF~~i~~~Gi~ni~~~~p~Vl~AlnP~yai~f~~~~~~ 156 (661)
.|...++++ +||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+|+||+||++||.+||.
T Consensus 189 ~~~~~~~~vvv~is~~ILv~LF~~Q~~GT~kvg~~FgPIml~Wf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~f~~~~~~ 268 (779)
T PLN00149 189 MSKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLTWLLCISAIGVYNIFHWNPHVYQALSPYYMYKFLKKTQR 268 (779)
T ss_pred CCCccCCceehHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCHhHhhhcCHHHHHHHHHHCCC
Confidence 976544555 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhccceeeeecchhhhhccCCCCCccchhhhhhhhHhHHHHHhhccchhhhccCcc---cccccccccccCcchHHH
Q 006110 157 DAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPD---SANRIFYDSVPDSLFWPV 233 (661)
Q Consensus 157 ~~~~~LG~VvL~vTG~EALyADmGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~Ll~~p~---~~~npFf~~~P~~~~~P~ 233 (661)
+||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||+ +++||||+++|+|++||+
T Consensus 269 ~g~~~LGgV~L~iTG~EALyADlGHF~~~~Ir~aw~~~V~P~L~L~Y~GQaA~l~~~p~~~~~~~~pFy~~iP~~~~~P~ 348 (779)
T PLN00149 269 GGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSKHHVIESDYRIGFYVSVPEKLRWPV 348 (779)
T ss_pred ceeEeecchhhcccchhhhhhcccCCCccceeeeehhhHHHHHHHHhhhHHHHHhcCcchhccccCcHHHhCCchhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999997 556699999999999999
Q ss_pred HHHHHHHHHHhhhhhhhchhhHHHHHHHhCCCcceeEEeCCCccCCccccchHHHHHHHHhheeeEEeCCchhHHhhhhc
Q 006110 234 FVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGI 313 (661)
Q Consensus 234 ~vlAtlAtIIASQA~ISg~FSl~~Qai~Lg~~Pr~~i~hTS~~~~GQIYiP~vNw~Lm~~~i~vv~~F~~s~~l~~AYGi 313 (661)
+++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||||||+
T Consensus 349 ~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGi 428 (779)
T PLN00149 349 LVIAILAAVVGSQAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQIYIPEINWTLMLLCLAVTVGFRDTKRLGNASGL 428 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeHHHHHHHHHHHHhheeEecChHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhHhcccCCccHHHHHHHHHHHHHHHHhhhHHHHHH
Q 006110 314 AEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYR 393 (661)
Q Consensus 314 AVt~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~f~sanl~Kv~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~ 393 (661)
||++||++||+|+++||+.+|+|+++++++|+++|+++|++|||||+.||+||||+||++|++++++|++||||++++++
T Consensus 429 AV~~vM~iTT~L~~lv~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~ 508 (779)
T PLN00149 429 AVITVMLVTTCLMSLVIVLCWHKSVLLAICFIFFFGTIEALYFSASLIKFLEGAWVPIALSFIFLLVMYVWHYGTLKRYE 508 (779)
T ss_pred hhehHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCChHHHHHhcCCCCCcccceeEEEeecCCCCcchHHHHHhhhcCccceEEEEEEEEEecccccCCCceEEEEEe
Q 006110 394 SEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRV 473 (661)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lh~~vvfl~v~~~~~P~V~~~eR~~v~~~ 473 (661)
++.++++|++++.++.++.++.||||+|+|||++.+|+|++|.||++|||++||++||+|||++|+|+||++||++++++
T Consensus 509 ~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~~~~~~~lhe~~Vfv~ik~~~vP~V~~~eR~~v~~i 588 (779)
T PLN00149 509 FDVQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGRI 588 (779)
T ss_pred HHhhcCCCHHHHHHhccCCCCcccCcEEEEEcCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEe
Confidence 99999999999988887777889999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEEEEeeecccccChhHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccc-ccccCCCCCCCCCC------
Q 006110 474 GPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDS-VSVASRDPEASGSY------ 546 (661)
Q Consensus 474 ~~~~~~~~r~~~ryGy~d~~~~~~~~Fe~~lv~~L~~fi~~e~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~------ 546 (661)
+++++++|||++||||||..++ ++|||++|+++|++|||.|+.+...+++... +.++ .+..++.....+..
T Consensus 589 ~~~~~~~~r~vvryGy~d~~~d-~~dFE~~Lve~L~~FI~~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (779)
T PLN00149 589 GPKEYRLYRCIVRYGYRDVHKD-DMEFEKDLVCSIAEFIRSEKPEPNGAPENEE-GEDERMTVVGTCSTHLEGIQLREDD 666 (779)
T ss_pred cCCCceEEEEEEEEeecccccc-chHHHHHHHHHHHHHHHhhhhcccccccccc-ccccccccccccccccccccccccc
Confidence 9988899999999999999876 8999999999999999999742111100000 0000 00000000000000
Q ss_pred --CccccccccccccccccCCCCCccccccccc-CCCccCCCCCCHHHhHHHHHHhHhcCcEEEEeeceEEecCCcchhH
Q 006110 547 --GTEELKIPLMHERRFDESGTSASEETTSALP-SSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLK 623 (661)
Q Consensus 547 --~~~s~~~p~~~~~~~~~e~~~~~~~~~~~v~-~~~~~~~~~~~~~~el~~L~~A~e~gvvY~lGr~~v~a~~~S~~~k 623 (661)
+..+.+.+..+...+. + .+..+++++ ..+.+.+.++++++|+++|++|||+||+|++||++|++|++|+++|
T Consensus 667 ~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~s~v~Ar~~Ss~~K 741 (779)
T PLN00149 667 SDKQEPAGTSELREIRSP-P----VSRPKKRVRFVVPESPKIDRGAREELQELMEAREAGMAYILGHSYVRAKQGSSMMK 741 (779)
T ss_pred ccccccccccccccccCc-c----ccCcccceeeccccccccchhHHHHHHHHHHHHHcCcEEEecCceEEEcCCCcHHH
Confidence 0000000000000000 0 011124555 2333444567889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccccccCCCCEEEEeeEEEC
Q 006110 624 KLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV 661 (661)
Q Consensus 624 Ki~i~~lf~fLrrN~r~~~~~l~IP~~rlvEvG~~~ei 661 (661)
|+++|++|+|||||||++...|+|||+|++||||+|||
T Consensus 742 K~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~v 779 (779)
T PLN00149 742 KLVINYGYDFLRRNSRGPRYALSVPHASTLEVGMVYHV 779 (779)
T ss_pred HHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 99999999999999999999999999999999999997
No 4
>PLN00150 potassium ion transporter family protein; Provisional
Probab=100.00 E-value=1.5e-205 Score=1720.41 Aligned_cols=645 Identities=49% Similarity=0.902 Sum_probs=579.4
Q ss_pred CCCCCcchhhhccccccCCCChhhHHHHHHHHHHhhccchhhHHHHHHHhhhhhhhcCccccccceeeccccccccccCC
Q 006110 1 MLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHG 80 (661)
Q Consensus 1 l~~n~~~~d~~~s~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~l~G~al~~gDgviTPAiSVLSAveGl~v~~p~ 80 (661)
++||||++|+++|+|+++ +..+..++|++||+++.+|++++++|++|+||+||||+||||||||||||||++..|+
T Consensus 133 l~~~~~~~~~~~s~~~~~----~~~r~~~~k~~lE~~~~~~~~l~~l~l~G~~m~~gDgviTPAISVLSAVeGL~v~~p~ 208 (779)
T PLN00150 133 LLPNQHPTDVELTTYVVD----NMNRKTRIQRKLENSRVWQNVLLLIVLLGTCMVIGDGILTPSISVLSAVVGIKAASSG 208 (779)
T ss_pred cCCccccchhhhhhcccc----cchhhhHHHHhhhcchHHHHHHHHHHHHHHHHHhcccccccchhhhhhhccccccCCC
Confidence 579999999999999864 2334456999999999899999999999999999999999999999999999999999
Q ss_pred CCCceeehhHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHhhhhhhccccCcceeeecChHHHHHHHHhcCcchhh
Q 006110 81 FGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWS 160 (661)
Q Consensus 81 ~~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~FgPIm~~WF~~i~~~Gi~ni~~~~p~Vl~AlnP~yai~f~~~~~~~~~~ 160 (661)
+++++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+|+||+||++||.+||.+||.
T Consensus 209 l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~FgPIm~~Wf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~ 288 (779)
T PLN00150 209 LDTNLVTIISCVILVILFSLQRFGTHKVSFLFAPIFLCWFFSLALIGCYNIIKWDKSVFLAFNPLYIVSFFIRNGRQGWE 288 (779)
T ss_pred CCCCeehhhHHHHHHHHHHHHhccchhhhhhhccHHHHHHHHHHHHHHHHHHhcCHHHHhhcCHHHHHHHHHhCCCceEE
Confidence 98899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceeeeecchhhhhccCCCCCccchhhhhhhhHhHHHHHhhccchhhhccCcccccccccccccCcchHHHHHHHHHH
Q 006110 161 ALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALA 240 (661)
Q Consensus 161 ~LG~VvL~vTG~EALyADmGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~Ll~~p~~~~npFf~~~P~~~~~P~~vlAtlA 240 (661)
+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++.+||||+++|+|++||++++||+|
T Consensus 289 ~LG~V~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~LlL~Y~GQaA~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlA 368 (779)
T PLN00150 289 SLGGIVLCMTGTEAMFADLGHFTVKSMQIAFTSLVYPCLLLTYLGQAAYLVKHMEDVNDPFYRSLPKPIYWPIFVLATCS 368 (779)
T ss_pred EecceeeeecchhhhhccccCCCccceeeeehhhHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhchhhHHHHHHHhCCCcceeEEeCCCccCCccccchHHHHHHHHhheeeEEeCCchhHHhhhhchhhhHHH
Q 006110 241 AMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVML 320 (661)
Q Consensus 241 tIIASQA~ISg~FSl~~Qai~Lg~~Pr~~i~hTS~~~~GQIYiP~vNw~Lm~~~i~vv~~F~~s~~l~~AYGiAVt~~M~ 320 (661)
|||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||||||+||++||+
T Consensus 369 tIIASQA~ISg~FSi~~Qai~Lg~fPrvkI~hTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~ 448 (779)
T PLN00150 369 AMIASQAMISATFSIVKQAMALGCFPRVKIVHTSNKVHGQVYIPEINWILMVLCLVITAGFRDTDEIGNAYGIAVVGVMI 448 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeHHHHHHHHHHHHhheEEecChHHHHHHhhhheehhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhHhcccCCccHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcC
Q 006110 321 VSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKI 400 (661)
Q Consensus 321 iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~f~sanl~Kv~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~~~~~~ 400 (661)
+||+|+++||+.+|||+++++++|+++|+++|++|||||+.||+||||+||++|++++++|++|+||++++++++.++++
T Consensus 449 iTT~L~~~v~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v 528 (779)
T PLN00150 449 ITTCLMTLVMIIIWRKHILLALLFFTVFAIIEGIYFSAVLFKVTQGGWVPLVIAAVFGTVMYTWHYGTRKRYLYEMQHKV 528 (779)
T ss_pred HHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHhcCCCCCcccceeEEEeecCCCCcchHHHHHhhhcCccceEEEEEEEEEecccccCCCceEEEEEecCCCCcE
Q 006110 401 SMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHM 480 (661)
Q Consensus 401 ~~~~~~~~~~~~~~~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lh~~vvfl~v~~~~~P~V~~~eR~~v~~~~~~~~~~ 480 (661)
|+++|.+..++.++.||||+|+|||++++|+|++|.||++|||++||++||+|||++|+|+||++||+++++++++++++
T Consensus 529 ~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~v~~~~~lhe~~Vfl~i~~~~vP~V~~~eR~~v~~i~~~~~r~ 608 (779)
T PLN00150 529 SVGWLLGLGPSLGLVRVPGIGLMYTDLAHGVPPLFSHFITNLPAIHSTVVFVCIKYLPVNTVPQDERFLIRRIGPRAYSM 608 (779)
T ss_pred CHHHHHhhcccCCCcccCcEEEEEeCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCCceE
Confidence 99999888777778899999999999999999999999999999999999999999999999999999999999988889
Q ss_pred EEEEEEEeeecccccChhHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccccccccCCCCCCCCCC-Cccccccccc-cc
Q 006110 481 FRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDPEASGSY-GTEELKIPLM-HE 558 (661)
Q Consensus 481 ~r~~~ryGy~d~~~~~~~~Fe~~lv~~L~~fi~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~p~~-~~ 558 (661)
|||++||||||..++ ++|||++|+++|++|||.|+.+...+++...++.+..+...+ .+++ ...+.+.+.. ..
T Consensus 609 ~r~vvryGy~d~~~d-~~dFE~~LvesL~~FIr~e~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 683 (779)
T PLN00150 609 YRCAARYGYTDLEKK-DDNFEQLLIASLERFIEIESFREQSDLESMAASWTPEELMGE----GNSVGSGLFTQYDQSDIN 683 (779)
T ss_pred EEEEEEEccCcCccc-chHHHHHHHHHHHHHHHhhhhccccccccccccccccccccc----CCcccccccccccccccc
Confidence 999999999999876 899999999999999999974211110000000000000000 0000 0000000000 00
Q ss_pred cccccCCCCCcccccccccCCCccCCCCCCHHHhHHHHHHhHhcCcEEEEeeceEEecCCcchhHHHHHHHHHHHHHHhc
Q 006110 559 RRFDESGTSASEETTSALPSSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNC 638 (661)
Q Consensus 559 ~~~~~e~~~~~~~~~~~v~~~~~~~~~~~~~~~el~~L~~A~e~gvvY~lGr~~v~a~~~S~~~kKi~i~~lf~fLrrN~ 638 (661)
.++..+... .++++++ ..+.+++.++|+++|++|||+|++|++||++|++|++|+++||+++|++|+||||||
T Consensus 684 ~~~~~~~~~---~~~~~~~----~~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~v~Ak~~Ss~~KK~vIN~~Y~FLRkNc 756 (779)
T PLN00150 684 FATSQEWKR---PSSQEDS----VSGHSSDTQDEVAFLNKCKEAGVVYILGNNDVKARKDSGFFKKVIINYIYTFLRRIS 756 (779)
T ss_pred ccccccccc---ccccccc----cccccccHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhc
Confidence 000000000 0011222 122346889999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCEEEEeeEEEC
Q 006110 639 RAGAANMSVPHMNILQVGMTYMV 661 (661)
Q Consensus 639 r~~~~~l~IP~~rlvEvG~~~ei 661 (661)
|++...|+|||+|++||||+|||
T Consensus 757 R~~~~~L~IPh~~LleVGmvY~V 779 (779)
T PLN00150 757 RDSEVVLNIPHECLLKVGMVYYV 779 (779)
T ss_pred cCCccccCCChHHeEEeceEEEC
Confidence 99999999999999999999997
No 5
>TIGR00794 kup potassium uptake protein. Proteins of the KUP family include the KUP (TrkD) protein of E. coli, a partially sequenced ORF from Lactococcus lactis, high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus, Neurospora crassa, and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter, and uptake is blocked by protonophores such as CCCP (but not arsenate), the energy coupling mechanism has not been defined. However, the N. crassa protein has been shown to be a K+:H+ symporter, establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli.
Probab=100.00 E-value=1.1e-196 Score=1641.57 Aligned_cols=603 Identities=43% Similarity=0.765 Sum_probs=568.5
Q ss_pred CCCCCcchhhhccccccCCCChhhHHHHHHHHHHhhccchhhHHHHHHHhhhhhhhcCccccccceeeccccccccccCC
Q 006110 1 MLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHG 80 (661)
Q Consensus 1 l~~n~~~~d~~~s~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~l~G~al~~gDgviTPAiSVLSAveGl~v~~p~ 80 (661)
++||||++|+++++|+.+.+.+ .++..++|+++|++++.|++++++|++|+||+||||+||||||||||||||+++.|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~le~~~~~~~~l~~~~l~G~al~~gDgviTPAiSVLSAVeGl~v~~p~ 162 (688)
T TIGR00794 84 ARPVHQELDRAESSYSTKSPNL-LNKTTSLKTKLELSKFISKFLVIFGLLGGSMVMGDGVLTPAISVLSAVSGLEIVAPS 162 (688)
T ss_pred CCCcccchhhhhhhcccccccc-cchhhHHHHHhhhhHHHHHHHHHHHHHhHHHHhcccccccchhhhhhhccccccCCC
Confidence 3689999999999999887664 567788999999998888899999999999999999999999999999999999999
Q ss_pred CCCceeehhHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHhhhhhhccccCcceeeecChHHHHHHHHhcCcchhh
Q 006110 81 FGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWS 160 (661)
Q Consensus 81 ~~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~FgPIm~~WF~~i~~~Gi~ni~~~~p~Vl~AlnP~yai~f~~~~~~~~~~ 160 (661)
+++++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+|+||+||++||.+||+.||.
T Consensus 163 ~~~~~Vv~it~~ILv~LF~iQ~~GT~kvg~~FgPim~vWF~~l~~~Gi~~I~~~~P~Vl~AlnP~ya~~f~~~~~~~~~~ 242 (688)
T TIGR00794 163 LSDTWVVPISCIILVLLFLIQRFGTAKVGFTFAPIILVWLLLLAGIGIYNIVKFNPEVLKALSPYYAVQFFIEYGTVGWV 242 (688)
T ss_pred CCCCeehhHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCHHHHhHhCHHHHHHHHHHCCCceee
Confidence 97799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceeeeecchhhhhccCCCCCccchhhhhhhhHhHHHHHhhccchhhhccCcccccccccccccCcchHHHHHHHHHH
Q 006110 161 ALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALA 240 (661)
Q Consensus 161 ~LG~VvL~vTG~EALyADmGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~Ll~~p~~~~npFf~~~P~~~~~P~~vlAtlA 240 (661)
+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||||||++||++.+||||+++|+|++|||+++||+|
T Consensus 243 ~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~~vlAtlA 322 (688)
T TIGR00794 243 SLGGVVLSITGVEAMFADLGHFGKLPIQLAWFTFVYPSLILCYIGQAAYLSKHPEAIKNPFFLSIPDWALWPLFIIATLA 322 (688)
T ss_pred eccchhheeccHhhhhcccCCCCcccceeehHHHHHHHHHHHHcchHHHHhcCcchhcCcHHHhCchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhchhhHHHHHHHhCCCcceeEEeCCCccCCccccchHHHHHHHHhheeeEEeCCchhHHhhhhchhhhHHH
Q 006110 241 AMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVML 320 (661)
Q Consensus 241 tIIASQA~ISg~FSl~~Qai~Lg~~Pr~~i~hTS~~~~GQIYiP~vNw~Lm~~~i~vv~~F~~s~~l~~AYGiAVt~~M~ 320 (661)
|||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||+|||+||++||+
T Consensus 323 tIIASQA~IsG~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYiP~vNw~Lmv~~i~vvl~F~~S~~la~AYGiaVt~tM~ 402 (688)
T TIGR00794 323 AIIASQAVISGVFSITSQAVRLGCFPRVKIIHTSEKYHGQIYIPFVNWLLMLGVIAVTAGFRDTNNLGAAYGIAVTGTFL 402 (688)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHheeEEecChHHHHHHhhhhhhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhHhcccCCccHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcC
Q 006110 321 VSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKI 400 (661)
Q Consensus 321 iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~f~sanl~Kv~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~~~~~~ 400 (661)
|||+|+++||+.+|||+++++++++++|+.+|+.||+||+.|++||||+||++|++++++|++|+|||+++++++.++++
T Consensus 403 iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~ 482 (688)
T TIGR00794 403 VTTCLMTVVMTIVWKWNIYFVALFLLVFLSVELIYFSSNLDKVPEGGWFPLSLSGIFMSVMTTWRYGRFRKLRRDHEHRV 482 (688)
T ss_pred HHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHhcCCCC-CcccceeEEEeecCCCCcchHHHHHhhhcCccceEEEEEEEEEecccccCCCceEEEEEecCCCCc
Q 006110 401 SMDFLLDLGSTLG-TVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYH 479 (661)
Q Consensus 401 ~~~~~~~~~~~~~-~~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lh~~vvfl~v~~~~~P~V~~~eR~~v~~~~~~~~~ 479 (661)
|+++|++.+.+.. ..|+||+|+|+|++++++|+++.||++|||++||++||+||+++|+|+||++||++++++++++ |
T Consensus 483 ~~~~~~~~l~~~~~l~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lhe~~vfltv~~~~~P~Vp~~eR~~v~~l~~~~-g 561 (688)
T TIGR00794 483 SISALIASLQPKPGLVRVPGIGIYYSNLVNGIPAVFGHLVTKFPSIHEVFIFLSLRTLDAPTVHNEERVQISQVGPTE-G 561 (688)
T ss_pred CHHHHHHHHhhcCCCcccCCeEEEeeCCccCCCHHHHHHHHhCCccceEEEEEEEEECCCCcCCcceEEEEEEEcCCC-C
Confidence 9999998765444 3799999999999999999999999999999999999999999999999999999999999744 8
Q ss_pred EEEEEEEEeeecccccChhHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccccccccCCCCCCCCCCCcccccccccccc
Q 006110 480 MFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDPEASGSYGTEELKIPLMHER 559 (661)
Q Consensus 480 ~~r~~~ryGy~d~~~~~~~~Fe~~lv~~L~~fi~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~p~~~~~ 559 (661)
+|||++||||||+|++ +++|+++++++|.+|++++..+. +. +.++ . +
T Consensus 562 ~~rv~~~yGf~e~~~~-~~~l~~~ii~~L~~fi~~~~~~~-~~-~~~~---------------~--------~------- 608 (688)
T TIGR00794 562 MYRCVIRYGFMDTPNE-PKELAAHIVNSIVEFVEHECGFN-LN-NLEE---------------L--------S------- 608 (688)
T ss_pred EEEEEEEecCCcCCCc-HHHHHHHHHHHHHHHHHHHhhhc-cc-cccc---------------c--------c-------
Confidence 9999999999999999 99999999999999999875310 00 0000 0 0
Q ss_pred ccccCCCCCcccccccccCCCccCCCCCCHHHhHHHHHHhHhcCcEEEEeeceEEecCCcchhHHHHH-HHHHHHHHHhc
Q 006110 560 RFDESGTSASEETTSALPSSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVI-NYFYAFLRRNC 638 (661)
Q Consensus 560 ~~~~e~~~~~~~~~~~v~~~~~~~~~~~~~~~el~~L~~A~e~gvvY~lGr~~v~a~~~S~~~kKi~i-~~lf~fLrrN~ 638 (661)
+ . +.+...++|.+++++++|+|++|++||++++++++++++|| |+ |++|+||+|||
T Consensus 609 -~---------~------------~~~~~~eee~~~~~~~~~~gv~yflg~~~~~~~~~~~~~~~-~~I~~lf~~l~rn~ 665 (688)
T TIGR00794 609 -D---------K------------RCRMPIEEIFENAMETKEHGYSYFMGEESLILKKRSPILRK-IRVNHVFLFIRRNA 665 (688)
T ss_pred -c---------c------------ccccchHHHHHHHHHHhhcCCEEEeeceEEEECCCccHHHH-HHHHHHHHHHHHhc
Confidence 0 0 00123567888899999999999999999999999997776 55 99999999999
Q ss_pred cccccccccCCCCEEEEeeEEEC
Q 006110 639 RAGAANMSVPHMNILQVGMTYMV 661 (661)
Q Consensus 639 r~~~~~l~IP~~rlvEvG~~~ei 661 (661)
|+++++|+||+||++|||++|||
T Consensus 666 ~~~~~~~~iP~~rvvevG~~~~i 688 (688)
T TIGR00794 666 RRAPKVLEIPPDRLLEVGTVVEI 688 (688)
T ss_pred cChhhheeCChhhEEEEeeEEEC
Confidence 99999999999999999999997
No 6
>PRK10745 trkD potassium transport protein Kup; Provisional
Probab=100.00 E-value=1.5e-184 Score=1523.87 Aligned_cols=527 Identities=32% Similarity=0.592 Sum_probs=508.8
Q ss_pred cchhhHHHHHHHhhhhhhhcCccccccceeeccccccccccCCCCCceeehhHHHHHHHHHHhhhccccccccchhhHHH
Q 006110 38 SSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHGFGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLA 117 (661)
Q Consensus 38 ~~~~~~l~~l~l~G~al~~gDgviTPAiSVLSAveGl~v~~p~~~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~FgPIm~ 117 (661)
++.|.+++++|++|+||+||||+||||||||||||||++.+|+++ ++|+||||+||++||++||+||+|||++|||||+
T Consensus 96 ~~~~~~l~~lgl~Gaal~~gDgvITPAISVLSAVEGL~v~~p~l~-~~Vvpit~~ILv~LF~iQ~~GT~~vG~~FgPIm~ 174 (622)
T PRK10745 96 ARTTSMLVIMGLIGGSFFYGEVVITPAISVMSAIEGLEIVAPQLD-TYIVPLSIIVLTLLFMIQKHGTGMVGKLFAPIML 174 (622)
T ss_pred cchhHHHHHHHHHHHHHHhhccccchhHHHHHHhhcccccCCCCC-CccHHHHHHHHHHHHHHhccccHHHhhhhhhHHH
Confidence 455668999999999999999999999999999999999999996 7999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhccccCcceeeecChHHHHHHHHhcCcchhhhccceeeeecchhhhhccCCCCCccchhhhhhhhHhH
Q 006110 118 LWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFP 197 (661)
Q Consensus 118 ~WF~~i~~~Gi~ni~~~~p~Vl~AlnP~yai~f~~~~~~~~~~~LG~VvL~vTG~EALyADmGHFg~~~Ir~aw~~~V~P 197 (661)
+||++||++|+|||++ ||+||+|+||+||++||.+||..||.+||+|+||+||+||||||||||||+|||+||+++|||
T Consensus 175 vWF~~i~~~Gi~~I~~-~P~Vl~AlnP~ya~~f~~~~~~~gf~~LG~V~L~vTGaEALYADmGHFG~~~Ir~aW~~~v~P 253 (622)
T PRK10745 175 TWFLTLAVLGLRSIIA-NPEVLHALNPMWAVHFFLEYKTVSFFALGAVVLAITGVEALYADMGHFGKFPIRLAWFTVVLP 253 (622)
T ss_pred HHHHHHHHHHHHHHhc-CHHHHhHhCHHHHHHHHHhCCCceEEEecceeeeccchHHHhhccCCCCccceeeeehhhHHH
Confidence 9999999999999998 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccchhhhccCcccccccccccccCcchHHHHHHHHHHHHHhhhhhhhchhhHHHHHHHhCCCcceeEEeCCCcc
Q 006110 198 CLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKR 277 (661)
Q Consensus 198 ~L~L~Y~GQgA~Ll~~p~~~~npFf~~~P~~~~~P~~vlAtlAtIIASQA~ISg~FSl~~Qai~Lg~~Pr~~i~hTS~~~ 277 (661)
||+|||+||||+|++||++.+||||+++|+|++|||+++||+||||||||+|||+||+++||++||||||+||+|||+++
T Consensus 254 ~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~viLATlAtIIASQAvISGaFSl~~QAi~Lg~~Prl~I~hTS~~~ 333 (622)
T PRK10745 254 SLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLILATLATVIASQAVISGVFSLTRQAVRLGYLPPMRIIHTSEME 333 (622)
T ss_pred HHHHHhcchHHHHhcCchhhcCcHHHhCChhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhCCCCCceEEeCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccchHHHHHHHHhheeeEEeCCchhHHhhhhchhhhHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Q 006110 278 MGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMS 357 (661)
Q Consensus 278 ~GQIYiP~vNw~Lm~~~i~vv~~F~~s~~l~~AYGiAVt~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~f~s 357 (661)
+||||||.|||+||++|+++|++||||+|||+|||+|||+||+|||+|++++++.+|+|+++++++++++|+.+|+.||+
T Consensus 334 ~GQIYIP~vNw~Lmv~~i~~vl~F~sS~~La~AYGiAVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~ 413 (622)
T PRK10745 334 SGQIYIPFVNWLLYVAVVIVIVSFEHSSNLAAAYGIAVTGTMVLTSILSTTVARKNWHWNKYFVALILIAFLCIDIPLFS 413 (622)
T ss_pred CCceeeHHHHHHHHHHHHeeEEEecCchHHHHHhhhhheeHhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHhcccCCccHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcCChHHHHHhcCCCCCcccceeEEEeecCCCCcchHHHH
Q 006110 358 AVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQ 437 (661)
Q Consensus 358 anl~Kv~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~avf~t~~~~~vP~~~~h 437 (661)
||+.|++||||+||++|++++++|+||++||++++++++++++|+++|++.+++.++.|+||+|+|+|+.++++|+++.|
T Consensus 414 anl~Ki~~GGW~pl~ia~v~~~iM~tW~~G~~~~~~~~~~~~~~l~~f~~~l~~~~~~rvpG~avflt~~~~~vP~~l~h 493 (622)
T PRK10745 414 ANLDKLLSGGWLPLSLGLVMFIVMTTWKSERFRLLRRMHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALLH 493 (622)
T ss_pred HHHHhhcCCChHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCHHHHHHHhhhcCCCccCeEEEEEeCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999998777789999999999999999999999
Q ss_pred HhhhcCccceEEEEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeecccccChhHHHHHHHHHHHHHHHHHHH
Q 006110 438 FLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQ 517 (661)
Q Consensus 438 ~l~~~~~lh~~vvfl~v~~~~~P~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~~Fe~~lv~~L~~fi~~e~~ 517 (661)
|+||||++||++||+||+++|+|+||++||++++++++ |+|||++||||||+||+ |+
T Consensus 494 ~lk~~~~lhe~~v~l~v~~~~~P~V~~~eR~~v~~l~~---g~~rv~~~yGf~e~~~i-~~------------------- 550 (622)
T PRK10745 494 NLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQLSP---TFWRVVASYGWRETPNV-EE------------------- 550 (622)
T ss_pred HhhcCCccceEEEEEEEEECCCcccCcccEEEEEEECC---CEEEEEEEecCCCCCCH-HH-------------------
Confidence 99999999999999999999999999999999999997 79999999999999999 77
Q ss_pred HHHHhhhcccCccccccccCCCCCCCCCCCccccccccccccccccCCCCCcccccccccCCCccCCCCCCHHHhHHHHH
Q 006110 518 DLALERNLLESDLDSVSVASRDPEASGSYGTEELKIPLMHERRFDESGTSASEETTSALPSSVMALDEDPSLEYELSALR 597 (661)
Q Consensus 518 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~p~~~~~~~~~e~~~~~~~~~~~v~~~~~~~~~~~~~~~el~~L~ 597 (661)
.++ .|+ . ++.+.|+
T Consensus 551 --~L~-~~~----------------~-------------------------------------------~g~~~~~---- 564 (622)
T PRK10745 551 --VFH-RCG----------------L-------------------------------------------EGLSCRM---- 564 (622)
T ss_pred --HHH-HHH----------------h-------------------------------------------CCCCCCc----
Confidence 444 222 0 1223345
Q ss_pred HhHhcCcEEEEeeceEEecCCcchhHHHHHHHHHHHHHHhccccccccccCCCCEEEEeeEEEC
Q 006110 598 EAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV 661 (661)
Q Consensus 598 ~A~e~gvvY~lGr~~v~a~~~S~~~kKi~i~~lf~fLrrN~r~~~~~l~IP~~rlvEvG~~~ei 661 (661)
++++||+|||+++++++++|.+ ||+++|+||.||+++++++|++|+|||+|+|+++|+
T Consensus 565 ----~~~s~fl~r~~l~~~~~~~m~~--wr~~lF~~m~rna~~~~~~f~lP~~rvvelG~~v~i 622 (622)
T PRK10745 565 ----METSFFMSHESLILGKRPWYLR--LRGKLFLLLQRNALRAPDQFEIPPNRVIELGTQVEI 622 (622)
T ss_pred ----cceEEEEeeEEEEeCCCCCcHH--HHHHHHHHHHHcCCCHHHHhCCCcccEEEEeeEEeC
Confidence 8999999999999999999999 999999999999999999999999999999999996
No 7
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-176 Score=1427.22 Aligned_cols=527 Identities=35% Similarity=0.636 Sum_probs=515.1
Q ss_pred cchhhHHHHHHHhhhhhhhcCccccccceeeccccccccccCCCCCceeehhHHHHHHHHHHhhhccccccccchhhHHH
Q 006110 38 SSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHGFGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLA 117 (661)
Q Consensus 38 ~~~~~~l~~l~l~G~al~~gDgviTPAiSVLSAveGl~v~~p~~~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~FgPIm~ 117 (661)
+|...++.++|++|+|+|||||+||||||||||||||++++|.++ ++|+|||++||++||++||+||++||++|||||+
T Consensus 101 ~~~~~~l~~~g~iGaalf~GD~vITPAiSVlSAvEGL~iv~p~~~-~~Vvpitl~IL~~LF~iQ~~GT~~Vg~~FGPVm~ 179 (627)
T COG3158 101 PRRTALLIILGLIGAALFYGDAVITPAISVLSAVEGLEIVTPALD-PYVVPITLIILVLLFLIQRFGTGRVGKLFGPVML 179 (627)
T ss_pred CCCchhhhhHHHHhHHHHhcccccchhHHHHHHhccccccCcccc-CccHHHHHHHHHHHHHHhcccchhhhhhhccHHH
Confidence 366779999999999999999999999999999999999999998 9999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhccccCcceeeecChHHHHHHHHhcCcchhhhccceeeeecchhhhhccCCCCCccchhhhhhhhHhH
Q 006110 118 LWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFP 197 (661)
Q Consensus 118 ~WF~~i~~~Gi~ni~~~~p~Vl~AlnP~yai~f~~~~~~~~~~~LG~VvL~vTG~EALyADmGHFg~~~Ir~aw~~~V~P 197 (661)
+||+++|++|++||.+ ||+||+|+||+||++|+.++|..||++||+||||+||+||||||||||||+|||.||+++|+|
T Consensus 180 lWF~~l~~~Gl~~i~~-~p~IL~AiNP~yAi~fl~~~~~~gf~vLGaVfLavTGaEALYADmGHfGr~pI~~AWf~vv~P 258 (627)
T COG3158 180 LWFLALAVLGLINIID-DPEILRAINPYYAVHFLLEEGFVGFFVLGAVFLAVTGAEALYADMGHFGRKPIRVAWFFVVLP 258 (627)
T ss_pred HHHHHHHHHHHHHHhc-CHHHHHHhChHHHHHHHHhCCceEEEEeeeeeeeeccHHHHHhhccccCCccHHHHHHHHHHH
Confidence 9999999999999998 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccchhhhccCcccccccccccccCcchHHHHHHHHHHHHHhhhhhhhchhhHHHHHHHhCCCcceeEEeCCCcc
Q 006110 198 CLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKR 277 (661)
Q Consensus 198 ~L~L~Y~GQgA~Ll~~p~~~~npFf~~~P~~~~~P~~vlAtlAtIIASQA~ISg~FSl~~Qai~Lg~~Pr~~i~hTS~~~ 277 (661)
||+|||+||||++++|||+..||||.++|+|++|||++|||+||||||||+|||+||++|||++||++||+||.|||+++
T Consensus 259 ~L~LNY~GQGA~vL~~p~a~~npFF~~~P~~aliP~viLAT~ATVIASQAvISGaFSLtrQAi~Lg~lPrm~I~~TSe~~ 338 (627)
T COG3158 259 CLLLNYFGQGALLLSNPEAIGNPFFLLAPDWALIPLVILATAATVIASQAVISGAFSLTRQAIRLGYLPRMRIRHTSETE 338 (627)
T ss_pred HHHHHHccccceeccCcccccCcHHHhChhhHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHhCCCCceEEEecCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccchHHHHHHHHhheeeEEeCCchhHHhhhhchhhhHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Q 006110 278 MGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMS 357 (661)
Q Consensus 278 ~GQIYiP~vNw~Lm~~~i~vv~~F~~s~~l~~AYGiAVt~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~f~s 357 (661)
.||||||.|||+|++++++++++||+|++||+|||||||+||+|||+|++++++..|||+++.+.++.++|+++|..||+
T Consensus 339 ~GQIYiP~VN~~L~~~V~~~vl~F~~S~~LAaAYGiAVTgtM~iTt~L~~~~~~~~w~w~~~~~~~~~~~f~~id~~Ff~ 418 (627)
T COG3158 339 SGQIYIPAVNWLLLVAVVFVVLGFGSSSNLAAAYGIAVTGTMVITTILLTVVMRKKWKWRKWLVALILIVFLAIDILFFA 418 (627)
T ss_pred cceEEehHHHHHHHHHHhheeeEecChHHHHHhhChheeehhHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHhcccCCccHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcCChHHHHHhcCCCCCcccceeEEEeecCCCCcchHHHH
Q 006110 358 AVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQ 437 (661)
Q Consensus 358 anl~Kv~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~avf~t~~~~~vP~~~~h 437 (661)
||+.|+.||||+|+++|++++++|+||++|+++++++.+++++|+|.|++++++.++.||||||||+|++.+.+|.+++|
T Consensus 419 AN~~Ki~~GGw~pllia~~i~~vM~tW~~g~~~l~~~~~~~~i~l~~fi~~l~~~~p~~v~gTAVfLt~~~~~vP~aLlh 498 (627)
T COG3158 419 ANLLKIHDGGWLPLLLAAVIFFVMWTWKRGRQILFEKTRENGIPLDAFIASLEKHPPVRVPGTAVFLTRDPDVVPRALLH 498 (627)
T ss_pred hhhhhhccCCChHHHHHHHHHHHHHHhhhhhHHHHHHhhcCCCCHHHHHHHHhhCCCcccCceEEEEcCCCCcCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcCccceEEEEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeecccccChhHHHHHHHHHHHHHHHHHHH
Q 006110 438 FLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQ 517 (661)
Q Consensus 438 ~l~~~~~lh~~vvfl~v~~~~~P~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~~Fe~~lv~~L~~fi~~e~~ 517 (661)
|+|||+++||++||+|+++.++|+|+++||++++++++ +++|++++|||||+||+ |+
T Consensus 499 nlkhnkvlhe~nv~ltv~t~~~P~v~~~~r~~ve~l~~---~f~rV~l~~Gfme~pnv-p~------------------- 555 (627)
T COG3158 499 NLKHNKVLHERNVFLTVRTEDVPYVHPTDRVKVEQLSD---DFVRVVLHFGFMETPNV-PR------------------- 555 (627)
T ss_pred HhhhhheeeeeEEEEEEEecCCCCCCccceeeeeeccC---ceEEEEEEeeccCCCCH-HH-------------------
Confidence 99999999999999999999999999999999999998 69999999999999999 77
Q ss_pred HHHHhhhcccCccccccccCCCCCCCCCCCccccccccccccccccCCCCCcccccccccCCCccCCCCCCHHHhHHHHH
Q 006110 518 DLALERNLLESDLDSVSVASRDPEASGSYGTEELKIPLMHERRFDESGTSASEETTSALPSSVMALDEDPSLEYELSALR 597 (661)
Q Consensus 518 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~p~~~~~~~~~e~~~~~~~~~~~v~~~~~~~~~~~~~~~el~~L~ 597 (661)
.+. .|+ + +|...|+
T Consensus 556 --~l~-~~~----------------~-------------------------------------------~G~~f~i---- 569 (627)
T COG3158 556 --ALR-LCR----------------K-------------------------------------------KGLKFDI---- 569 (627)
T ss_pred --HHH-HHh----------------h-------------------------------------------cCceecc----
Confidence 565 443 1 3556677
Q ss_pred HhHhcCcEEEEeeceEEecCCcchhHHHHHHHHHHHHHHhccccccccccCCCCEEEEeeEEEC
Q 006110 598 EAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV 661 (661)
Q Consensus 598 ~A~e~gvvY~lGr~~v~a~~~S~~~kKi~i~~lf~fLrrN~r~~~~~l~IP~~rlvEvG~~~ei 661 (661)
++++||+||++++++++++|.+ |++++|..|.||+.+++++|+||+|||||+|.++||
T Consensus 570 ----m~tsFfl~re~l~~~~~~g~~~--w~~~lfi~l~r~aa~~~~~F~lp~~rvvElGtqveI 627 (627)
T COG3158 570 ----METSFFLSRESLIASKNSGMPR--WRDRLFIALARNAASPTDYFKLPPNRVVELGTQVEI 627 (627)
T ss_pred ----cceEEEEEeeeeecCCCCCchH--HHHHHHHHHHHhcCCHHHhhCCCCCcEEEeeeeeeC
Confidence 9999999999999999999999 999999999999999999999999999999999987
No 8
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members.; GO: 0015079 potassium ion transmembrane transporter activity, 0071805 potassium ion transmembrane transport, 0016020 membrane
Probab=100.00 E-value=2.5e-167 Score=1375.93 Aligned_cols=459 Identities=44% Similarity=0.802 Sum_probs=451.5
Q ss_pred HHHHHHhhccchhhHHHHHHHhhhhhhhcCccccccceeeccccccccccCCCCCceeehhHHHHHHHHHHhhhcccccc
Q 006110 29 QLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHGFGESALVIVSIIILVALFSIQRFGTGKV 108 (661)
Q Consensus 29 ~~~~~le~~~~~~~~l~~l~l~G~al~~gDgviTPAiSVLSAveGl~v~~p~~~~~~Vv~is~~ILv~LF~iQ~~GT~kv 108 (661)
.+++..|++++.|+.++++|++|+||+||||+||||||||||||||++.+|+++ ++|+||||+||++||++||+||+||
T Consensus 76 L~~~~~~~~~~~~~~l~~l~l~G~al~~gDgviTPAISVlSAvEGl~v~~p~~~-~~Vv~it~~ILv~LF~iQ~~GT~~i 154 (534)
T PF02705_consen 76 LIRRFLKSSKRRRWLLLILGLLGAALFYGDGVITPAISVLSAVEGLEVATPSLE-PYVVPITIAILVGLFAIQRFGTAKI 154 (534)
T ss_pred HHHHhhccchhHHHHHHHHHHHHhhhhhcceeecchHHHHHHhhhhhccCCCCc-ceehhHHHHHHHHHHHHHhhhhhHH
Confidence 356677888788888899999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred ccchhhHHHHHHHHHHhhhhhhccccCcceeeecChHHHHHHHHhcCcchhhhccceeeeecchhhhhccCCCCCccchh
Q 006110 109 GFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQ 188 (661)
Q Consensus 109 g~~FgPIm~~WF~~i~~~Gi~ni~~~~p~Vl~AlnP~yai~f~~~~~~~~~~~LG~VvL~vTG~EALyADmGHFg~~~Ir 188 (661)
|++|||||++||++||++|+|||++ +|+||+|+||+||++||.+||+.||.+||+|+||+||+||||||||||||+|||
T Consensus 155 g~~FgPim~~WF~~l~~~G~~~I~~-~p~Vl~A~nP~yai~f~~~~~~~~~~~LG~V~L~~TGaEALyADmGHfg~~~Ir 233 (534)
T PF02705_consen 155 GKLFGPIMLLWFLTLGVLGLYNIIQ-HPEVLKALNPYYAIRFFIRNGWIGFFVLGAVFLCVTGAEALYADMGHFGRKPIR 233 (534)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHhh-CHHHHHHhCHHHHHHHHHHcCCchhhhcchHHHHHhhHHHHHhhhccccchhhh
Confidence 9999999999999999999999999 599999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhHHHHHhhccchhhhccCcccccccccccccCcchHHHHHHHHHHHHHhhhhhhhchhhHHHHHHHhCCCcce
Q 006110 189 IAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRL 268 (661)
Q Consensus 189 ~aw~~~V~P~L~L~Y~GQgA~Ll~~p~~~~npFf~~~P~~~~~P~~vlAtlAtIIASQA~ISg~FSl~~Qai~Lg~~Pr~ 268 (661)
+||+++|||||+|||+||||+|++||++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+
T Consensus 234 ~aw~~~V~PaL~LnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~ilAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~ 313 (534)
T PF02705_consen 234 IAWFFLVFPALLLNYFGQGALLLSHPEAVSNPFFLLIPEWLLWPMVILATLATIIASQAVISGAFSLTRQAIQLGYFPRL 313 (534)
T ss_pred hhHHHHHHHHHHHHHccHHHHHHcCcchhhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeCCCccCCccccchHHHHHHHHhheeeEEeCCchhHHhhhhchhhhHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Q 006110 269 KIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVF 348 (661)
Q Consensus 269 ~i~hTS~~~~GQIYiP~vNw~Lm~~~i~vv~~F~~s~~l~~AYGiAVt~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f 348 (661)
||+|||++++||||||+|||+||++|+++|++||||+|||+|||+||++||++||+|++++++.+|||+++++++++++|
T Consensus 314 ~I~hTS~~~~GQIYIP~vNw~L~i~~i~vvl~F~~S~~la~AYGiAVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f 393 (534)
T PF02705_consen 314 KIVHTSEKEEGQIYIPEVNWLLMIGVIAVVLGFRSSSNLAAAYGIAVTGTMLITTILLFLVMRRVWKWPLWLALLFFLFF 393 (534)
T ss_pred EEEECCcccCCcEechHHHHHHHHHHHhhheEECChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHhcccCCccHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcCChHHHHHhcCCCCCcccceeEEEeecCC
Q 006110 349 GSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELV 428 (661)
Q Consensus 349 ~~id~~f~sanl~Kv~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~avf~t~~~ 428 (661)
+++|+.||+||+.|++||||+||++|++++++|+||++||++++++++++++++++++++.++.++.|+||+|+|+|+..
T Consensus 394 l~id~~ff~anl~K~~~GGW~pl~ia~~l~~iM~tW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~aVFlt~~~ 473 (534)
T PF02705_consen 394 LVIDLLFFSANLLKFPHGGWFPLLIAAVLFTIMYTWRRGRKLLYEFERENKLPLDDFLELLEDQSIPRVPGTAVFLTRSP 473 (534)
T ss_pred HHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhhhhCCCceecceEEEEcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchHHHHHhhhcCccceEEEEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeec
Q 006110 429 QGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHMFRCVTRYGYKD 491 (661)
Q Consensus 429 ~~vP~~~~h~l~~~~~lh~~vvfl~v~~~~~P~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d 491 (661)
+++|+++.||++||+++||+++|++++++|+|+||++||+++++++++ |+|||++||||||
T Consensus 474 ~~vP~~l~h~l~~~~vlhe~~v~l~v~~~~vP~V~~~~R~~v~~l~~~--g~~rv~~ryGf~e 534 (534)
T PF02705_consen 474 DGVPPALLHNLKHNKVLHERVVFLTVKTEPVPRVPPEERYEVERLGPD--GFYRVTLRYGFME 534 (534)
T ss_pred ccCcHHHHHHHHhCCcccceEEEEEEEEeccCCCCCceEEEEEEecCC--CEEEEEEEecCCC
Confidence 999999999999999999999999999999999999999999999962 8999999999998
No 9
>TIGR00911 2A0308 L-type amino acid transporter.
Probab=92.72 E-value=0.43 Score=53.81 Aligned_cols=86 Identities=13% Similarity=0.128 Sum_probs=42.4
Q ss_pred eehhHHHHHHHHHHhhhccccccccc---hhhHHHHHHHHHHhhhhhhccccCcceeeecChHHHHHHHHhcCcchhh-h
Q 006110 86 LVIVSIIILVALFSIQRFGTGKVGFM---FAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWS-A 161 (661)
Q Consensus 86 Vv~is~~ILv~LF~iQ~~GT~kvg~~---FgPIm~~WF~~i~~~Gi~ni~~~~p~Vl~AlnP~yai~f~~~~~~~~~~-~ 161 (661)
...+++++++++..+.-+|....+++ +.-+.++=++.+.++|++.+.+.++. ..+|...+.-. .++..+|. .
T Consensus 165 ~~~i~~~~i~~~~~ln~~Gvk~~~~~~~i~~~~~l~~l~~~ii~~~~~~~~~~~~---~~~~~~~f~~~-~~~~~~~~~a 240 (501)
T TIGR00911 165 IRLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGGVE---SLNPKNAFEGT-ETSAGGIVLA 240 (501)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc---ccCcccccCCC-CCcHHHHHHH
Confidence 34577778888889999997665543 33222222233334555543321111 11222111000 02233443 4
Q ss_pred ccceeeeecchhhh
Q 006110 162 LGGCVLCITGAEAM 175 (661)
Q Consensus 162 LG~VvL~vTG~EAL 175 (661)
+..++.+.+|-|+.
T Consensus 241 ~~~~~~af~G~e~~ 254 (501)
T TIGR00911 241 FYSGIWAYGGWNYL 254 (501)
T ss_pred HHHHHHHHHhHHHH
Confidence 66777888888864
No 10
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]
Probab=86.39 E-value=9.7 Score=41.69 Aligned_cols=179 Identities=16% Similarity=0.132 Sum_probs=98.3
Q ss_pred eeehhHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHhhhhhhccccCcceeeecChHHHHHHHHhcCcchhhhccc
Q 006110 85 ALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGG 164 (661)
Q Consensus 85 ~Vv~is~~ILv~LF~iQ~~GT~kvg~~FgPIm~~WF~~i~~~Gi~ni~~~~p~Vl~AlnP~yai~f~~~~~~~~~~~LG~ 164 (661)
....++.+++++++.++-+|....++...-..++=++.+.++++..+..++......+++... .......-...++.
T Consensus 133 ~~~~~~~~~~~~~~~ln~~G~~~~~~~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 209 (466)
T COG0531 133 LIILIALALIALLTLLNLRGIKASAKINSIITILKIIILLIFIILGLFAFGFSNGNLFAPFNP---GGGSFGGILAAILL 209 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccCCCccc---ccchHHHHHHHHHH
Confidence 467789999999999999999888876665555555555555555544433222222221111 00000123455667
Q ss_pred eeeeecchhhh--hc-cCCCCCccchhhhhhhhHhHHHHHhhccchhhhccCcc-ccc-----cccccc---cc-CcchH
Q 006110 165 CVLCITGAEAM--FA-DLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPD-SAN-----RIFYDS---VP-DSLFW 231 (661)
Q Consensus 165 VvL~vTG~EAL--yA-DmGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~Ll~~p~-~~~-----npFf~~---~P-~~~~~ 231 (661)
++.+.+|-|+. +| ++=+ .+|.|-+|-..-..-+.++-.+++-+....-|. +.. +|+... .. .+..+
T Consensus 210 ~~~~f~G~e~~~~~a~E~kn-p~r~ip~aii~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~ 288 (466)
T COG0531 210 AFFAFTGFEAIATLAEEVKN-PKRTIPRAIILSLLIVLILYILGALVIVGVLPAGDLAASAPSAPLALAALFGGGNWGAI 288 (466)
T ss_pred HHHHhhcHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHHHhCccHHHHhccCCCccHHHHHHHcCccHHHH
Confidence 78889998864 33 2334 555565555443333333333333333333332 111 454432 23 35555
Q ss_pred HHHHHHHHHHHHhhhhhhhchhhHHHHHHHhCCCcc
Q 006110 232 PVFVLAALAAMIASQAMISATFSCIKQAMALGCFPR 267 (661)
Q Consensus 232 P~~vlAtlAtIIASQA~ISg~FSl~~Qai~Lg~~Pr 267 (661)
-+.+++.+++.-+..+.+.+.--+..+.-+-|++|+
T Consensus 289 ~i~~~~~~~~~~~~~~~~~~~sR~~~~~ardg~lP~ 324 (466)
T COG0531 289 IIAILALLSLFGSLLAWILAVSRVLYAMARDGLLPK 324 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccH
Confidence 555555555555556666666566666677899998
No 11
>TIGR00909 2A0306 amino acid transporter.
Probab=81.40 E-value=16 Score=40.04 Aligned_cols=212 Identities=15% Similarity=0.124 Sum_probs=94.5
Q ss_pred eehhHHHHHHHHHHhhhccccccc---cchhhHHHHHHHHHHhhhhhhccccCcceeeecChHHHHHHHHhcCcch-hhh
Q 006110 86 LVIVSIIILVALFSIQRFGTGKVG---FMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDA-WSA 161 (661)
Q Consensus 86 Vv~is~~ILv~LF~iQ~~GT~kvg---~~FgPIm~~WF~~i~~~Gi~ni~~~~p~Vl~AlnP~yai~f~~~~~~~~-~~~ 161 (661)
+..++++++++...+..+|....+ ..++.+.++=++.+.+.|+.+. ++.-+..+.|. +..+ ...
T Consensus 133 ~~~~~i~~~~~~~~l~~~g~~~~~~~~~v~~~~~i~~l~~~~~~~~~~~---~~~~~~~~~~~---------~~~~~~~~ 200 (429)
T TIGR00909 133 FNLPALLIVLFLTYILYLGAKESGKVNDILVVLKVAALLLFAALGAIHF---ASNNYTPFMPM---------GFGGVGAA 200 (429)
T ss_pred ccHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhhHHHhhC---cHHhcCCCCCC---------cHHHHHHH
Confidence 334567778888888998976554 5566665554444444454432 22222222221 1222 122
Q ss_pred ccceeeeecchhhhh--ccCCCCCccchhhhhhhhHhHHHHHhhccchhhhcc--Ccc---cccccccc----cccCcch
Q 006110 162 LGGCVLCITGAEAMF--ADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMK--YPD---SANRIFYD----SVPDSLF 230 (661)
Q Consensus 162 LG~VvL~vTG~EALy--ADmGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~Ll~--~p~---~~~npFf~----~~P~~~~ 230 (661)
+...+.+.+|=|+.- ++-=+-.+|.+.+|-..-+.=+. +.|..-...... .++ ..++|+.. ...++.-
T Consensus 201 ~~~~~~af~G~e~~~~~~~E~~~p~r~ip~ai~~~~~~~~-v~Yil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (429)
T TIGR00909 201 TALVFFAFIGFEAISTAAEEVKNPERDIPKAIILSLIVVT-LLYVLVAAVILGAVPWRQLAGSTAPLSLVGYDLGQGIGG 279 (429)
T ss_pred HHHHHHHHhhHHHHHhhHHhccCccccccHHHHHHHHHHH-HHHHHHHHHHhcCcCHHHhCCCCcHHHHHHHHhCchHHH
Confidence 344556667777653 23334455666666543222222 224433222221 111 12234332 2223333
Q ss_pred HHHHHHHHHHHHHhhhhhhhchhhHHHHHHHhCCCcceeEEeCCCccCCccccchHHHHHHHHhheeeEEeCCchhHHhh
Q 006110 231 WPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANA 310 (661)
Q Consensus 231 ~P~~vlAtlAtIIASQA~ISg~FSl~~Qai~Lg~~Pr~~i~hTS~~~~GQIYiP~vNw~Lm~~~i~vv~~F~~s~~l~~A 310 (661)
+-+.+.+.++..-+..+.+.+.==+....-+.|.+|+. .-++++|. | .|..--++......+...+.+.+.+.+.
T Consensus 280 ~~~~i~~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP~~-~~~~~~~~-~---~P~~a~~~~~~i~~~~~~~~~~~~l~~~ 354 (429)
T TIGR00909 280 LILTAGAVFSIASVMLAGIYGTSRVLFAMSRDGLLPGS-LSKVHPKT-G---TPHMSIIIFSLTAALLASLVPLEGLAEL 354 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH-HHHcCCCC-C---CcHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 33444444444443333333333333344578999973 22223221 2 5654333322222222334555555554
Q ss_pred hhchh
Q 006110 311 YGIAE 315 (661)
Q Consensus 311 YGiAV 315 (661)
.+++.
T Consensus 355 ~~~~~ 359 (429)
T TIGR00909 355 TSIGT 359 (429)
T ss_pred HHHHH
Confidence 44333
No 12
>PRK10435 cadB lysine/cadaverine antiporter; Provisional
Probab=78.50 E-value=40 Score=37.52 Aligned_cols=23 Identities=17% Similarity=0.177 Sum_probs=17.0
Q ss_pred hHHHHHHHHHHhhhccccccccc
Q 006110 89 VSIIILVALFSIQRFGTGKVGFM 111 (661)
Q Consensus 89 is~~ILv~LF~iQ~~GT~kvg~~ 111 (661)
++++++.++..+..+|+...+++
T Consensus 124 ~~~~i~~~~~~ln~~gvk~~~~i 146 (435)
T PRK10435 124 ACIAIVWVFTFVNMLGGTWVSRL 146 (435)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHH
Confidence 34566667888999998877664
No 13
>TIGR00930 2a30 K-Cl cotransporter.
Probab=77.93 E-value=86 Score=39.24 Aligned_cols=25 Identities=20% Similarity=0.179 Sum_probs=17.9
Q ss_pred eehhHHHHHHHHHHhhhcccccccc
Q 006110 86 LVIVSIIILVALFSIQRFGTGKVGF 110 (661)
Q Consensus 86 Vv~is~~ILv~LF~iQ~~GT~kvg~ 110 (661)
+-.++++++++++.+--+|....++
T Consensus 203 ~~iia~i~l~ll~~In~~Gvk~~ak 227 (953)
T TIGR00930 203 IRIYGTVTVVVLLGISFAGMEWENK 227 (953)
T ss_pred chHHHHHHHHHHHHHHHhhHHHHHH
Confidence 3456778888888888888855443
No 14
>PRK15049 L-asparagine permease; Provisional
Probab=77.31 E-value=27 Score=39.87 Aligned_cols=22 Identities=9% Similarity=0.077 Sum_probs=15.6
Q ss_pred hHHHHHHHHHHhhhcccccccc
Q 006110 89 VSIIILVALFSIQRFGTGKVGF 110 (661)
Q Consensus 89 is~~ILv~LF~iQ~~GT~kvg~ 110 (661)
+..++++++..+.-+|....+.
T Consensus 147 ~~~~~~~l~~~iN~~gvk~~~~ 168 (499)
T PRK15049 147 FALAALTIVGTMNMIGVKWFAE 168 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4666777778888888766554
No 15
>PRK10655 potE putrescine transporter; Provisional
Probab=76.86 E-value=59 Score=36.00 Aligned_cols=41 Identities=17% Similarity=0.071 Sum_probs=23.5
Q ss_pred hHHHHHHHHHHhhhccccccccc---hhhHHHHHHHHHHhhhhh
Q 006110 89 VSIIILVALFSIQRFGTGKVGFM---FAPVLALWFFSLGSIGLY 129 (661)
Q Consensus 89 is~~ILv~LF~iQ~~GT~kvg~~---FgPIm~~WF~~i~~~Gi~ 129 (661)
+++++++.+..+.-+|+...+++ ..-.+++-++.+.+.|++
T Consensus 126 ~~~~~l~~~~~ln~~g~~~~~~i~~i~~~~~l~~l~~~~i~~~~ 169 (438)
T PRK10655 126 ATIGVLWLCTVANFGGARITGQISSVTVWGVIIPVVGLSIIGWF 169 (438)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566677788999997666554 223333334444444544
No 16
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A ....
Probab=76.62 E-value=15 Score=40.08 Aligned_cols=223 Identities=15% Similarity=0.179 Sum_probs=119.0
Q ss_pred eehhHHHHHHHHHHhhhccccccccc---hhhHHH-HHHHHHHhhhhhhccccCcce-----eeecChHHHHHHHHhcCc
Q 006110 86 LVIVSIIILVALFSIQRFGTGKVGFM---FAPVLA-LWFFSLGSIGLYNLVKYDISV-----VRAFNPIYIYLFFKKNGK 156 (661)
Q Consensus 86 Vv~is~~ILv~LF~iQ~~GT~kvg~~---FgPIm~-~WF~~i~~~Gi~ni~~~~p~V-----l~AlnP~yai~f~~~~~~ 156 (661)
...+++++++..+.+.-+|....+++ .+=+.+ .-++.+.+.|++...+ +..- ....+|. +.
T Consensus 118 ~~~i~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~i~~~l~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~---------~~ 187 (426)
T PF13520_consen 118 QFLIAIILILLFTLLNLLGIKLSGKIQNILTVIKIVIPLLVLIILGIVSFSF-SGFNSLSFSLSTFFPS---------GW 187 (426)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTC-CHHH----SHSCSSCS---------SS
T ss_pred heeeeecccccceEeeechhhhhhhhhhhhhhhhhhhhhhhheeEEEeeecc-cccccccccccccCCc---------cc
Confidence 35577888888899999998766644 333333 3445555666665533 1111 1112222 11
Q ss_pred c-hhhhccceeeeecchhhhhccCCCCCccchhhhhhhhHhHHHHHhhccchhhhccCcc----cccc------cccccc
Q 006110 157 D-AWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPD----SANR------IFYDSV 225 (661)
Q Consensus 157 ~-~~~~LG~VvL~vTG~EALyADmGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~Ll~~p~----~~~n------pFf~~~ 225 (661)
. -+..++..+.+.+|-|+.=.-.+-.-+|.+.+|=..-+.-+.++.-+..-++...-|. ..+| .+++..
T Consensus 188 ~~~~~~~~~~~~~~~G~e~~~~~~~E~k~k~ip~ai~~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (426)
T PF13520_consen 188 PGFLAGFSVAFFAFSGFEAIASLAEENKNKTIPRAIIISIIIVAIIYILFSIALLGALPDDELANSSNSPSPFAVLASAV 267 (426)
T ss_dssp SHHHHHHHHHGGGGTTTTHHHHGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTHCHHHTTTCHHCHHHHHHHHH
T ss_pred cchhhHHHHHHhhcccccccccccccccchhheeecccchhHHHHHHhhhhheeeecccchhhhcccccccccchhhccc
Confidence 1 2556677888889988865544445456666655443333333332333333333221 1112 223322
Q ss_pred -cCcchHHHHHHHHHHHHHhhhhhhhchhhHHHHHHHhCCCcceeEEeCCCccCCccccchHHHHHHHHhh-eee--EEe
Q 006110 226 -PDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCV-VVV--SIF 301 (661)
Q Consensus 226 -P~~~~~P~~vlAtlAtIIASQA~ISg~FSl~~Qai~Lg~~Pr~~i~hTS~~~~GQIYiP~vNw~Lm~~~i-~vv--~~F 301 (661)
.++..+.+.+.+.++..-+-.+.+.+.--++.+.-+.|.+|+ +..+++ | .| .|..--+++..+. ++. ..|
T Consensus 268 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~sR~l~~~a~d~~lP~-~~~~~~-k-~~---~P~~a~~~~~~i~~i~~~~~~~ 341 (426)
T PF13520_consen 268 GGSWLAIIVSIAAILSLFGSINAFIFGASRLLYAMARDGVLPK-WFAKVN-K-FG---TPYNAIILVAVISSILLLLFLF 341 (426)
T ss_dssp HCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSG-GGGTTS-S-SS---SCHHHHHHHHHHHHHHHHHTTT
T ss_pred cccccccccccccccccccccchhhcchhhcccccccccchhh-hhhhcc-c-cC---CceeeehhhhHHHHHHHHHHHh
Confidence 457778787777777777666666666566667778899994 233333 2 22 3555444443333 222 223
Q ss_pred C---CchhHHhhhhchhhhHHHHHHH
Q 006110 302 Q---STTDIANAYGIAEVGVMLVSST 324 (661)
Q Consensus 302 ~---~s~~l~~AYGiAVt~~M~iTT~ 324 (661)
- +.+.+.+.+.+......+++.+
T Consensus 342 ~~~~~~~~l~~~~~~~~~~~~~~~~~ 367 (426)
T PF13520_consen 342 IPQSSFDILVSLSSVGYLISYILVIL 367 (426)
T ss_dssp SSSSHHHHHHHHHHHHTHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 3356666666666666666543
No 17
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter. Members of this protein family are putative putative glutamate/gamma-aminobutyrate antiporters. Each member of the seed alignment is found adjacent to a glutamate decarboxylase, which converts glutamate (Glu) to gamma-aminobutyrate (GABA). However, the majority belong to genome contexts with a glutaminase (converts Gln to Glu) as well as the decarboxylase that converts Glu to GABA. The specificity of the transporter remains uncertain.
Probab=74.77 E-value=35 Score=38.37 Aligned_cols=19 Identities=16% Similarity=0.092 Sum_probs=14.1
Q ss_pred ccHHHHHHHHHHHHHHHHh
Q 006110 367 GWLPLAFASVFLCVMYIWN 385 (661)
Q Consensus 367 GW~pl~ia~~~~~iM~~W~ 385 (661)
-|.+++++++++....-|-
T Consensus 434 ny~~~~~~~~~~~~~~~~~ 452 (474)
T TIGR03813 434 RYVGLLIGLAALFVTAPFL 452 (474)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4788888888777766665
No 18
>TIGR00907 2A0304 amino acid permease (GABA permease).
Probab=74.24 E-value=40 Score=37.88 Aligned_cols=22 Identities=23% Similarity=0.523 Sum_probs=17.1
Q ss_pred CccHHHHHHHHHHHHHHHHhhh
Q 006110 366 GGWLPLAFASVFLCVMYIWNYG 387 (661)
Q Consensus 366 GGW~pl~ia~~~~~iM~~W~~G 387 (661)
.-|.++++++++...+..|...
T Consensus 453 ~ny~~~~~~~~~~~~~~~~~~~ 474 (482)
T TIGR00907 453 MNYAVVVFAGVLAISLVYWKYK 474 (482)
T ss_pred CChHhHHHHHHHHHHHHHheEe
Confidence 3599999988888888777653
No 19
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=66.88 E-value=60 Score=34.52 Aligned_cols=53 Identities=15% Similarity=0.208 Sum_probs=39.3
Q ss_pred hHHhhhhchhhhHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH----HHHHHHHH
Q 006110 306 DIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGS----VELLYMSA 358 (661)
Q Consensus 306 ~l~~AYGiAVt~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~----id~~f~sa 358 (661)
+-=..||-+|..|.++.++-+++.+....+.+++.++++.++++. +|-..+|+
T Consensus 13 ~k~~~~G~~vl~ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lDR~ivss 69 (301)
T PF14362_consen 13 NKYAGIGAAVLFTALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLDRFIVSS 69 (301)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 334578999999999999888888888899887777766665554 55555554
No 20
>TIGR00906 2A0303 cationic amino acid transport permease.
Probab=64.53 E-value=1.5e+02 Score=34.66 Aligned_cols=44 Identities=14% Similarity=0.285 Sum_probs=25.9
Q ss_pred eehhHHHHHHHHHHhhhcccccccc---chhhHHHHHHHHHHhhhhh
Q 006110 86 LVIVSIIILVALFSIQRFGTGKVGF---MFAPVLALWFFSLGSIGLY 129 (661)
Q Consensus 86 Vv~is~~ILv~LF~iQ~~GT~kvg~---~FgPIm~~WF~~i~~~Gi~ 129 (661)
...+++++++++..+--+|+...++ .+.-+.++-++.+.+.|+.
T Consensus 161 ~~~~a~~ii~l~~~ln~~Gik~s~~v~~i~~~iki~~l~~~iv~g~~ 207 (557)
T TIGR00906 161 PDFFAVCLILLLAVLLSFGVKESAWVNKIFTAINILVLLFVIIAGFT 207 (557)
T ss_pred chHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHhhhHHHh
Confidence 3446677777777888899876654 3333333334444455554
No 21
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=63.94 E-value=1.8e+02 Score=32.80 Aligned_cols=44 Identities=7% Similarity=-0.203 Sum_probs=27.2
Q ss_pred ccCcchHHHHHHHHHHHHHhhhhhhhchhhHHHHHHHhCCCcce
Q 006110 225 VPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRL 268 (661)
Q Consensus 225 ~P~~~~~P~~vlAtlAtIIASQA~ISg~FSl~~Qai~Lg~~Pr~ 268 (661)
..+|..+.+.+.+.+++.-+..+.+.+.=-+..+.-+-|.+|+.
T Consensus 274 ~g~~~~~~i~~~~~is~~~~~~~~~~~~sR~~~a~ardg~lP~~ 317 (468)
T TIGR03810 274 VGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPKY 317 (468)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHH
Confidence 34555555555555555555555555555566666788999965
No 22
>PRK10238 aromatic amino acid transporter; Provisional
Probab=62.16 E-value=1e+02 Score=34.71 Aligned_cols=113 Identities=17% Similarity=0.131 Sum_probs=52.2
Q ss_pred hHHHHHHHHHHhhhcccccccc---chhhHHHHHHHHHHhhhhhhccc--cCcc-eeeecChHHHHHHHHhcCcchh-hh
Q 006110 89 VSIIILVALFSIQRFGTGKVGF---MFAPVLALWFFSLGSIGLYNLVK--YDIS-VVRAFNPIYIYLFFKKNGKDAW-SA 161 (661)
Q Consensus 89 is~~ILv~LF~iQ~~GT~kvg~---~FgPIm~~WF~~i~~~Gi~ni~~--~~p~-Vl~AlnP~yai~f~~~~~~~~~-~~ 161 (661)
..+++++.++.+.-+|+...|. .+.-+-++-++.+-++|+.-+.. .+|. .+.-+.+. .-+..++..++ ..
T Consensus 129 ~~~i~~~~~~~lN~~gv~~~~~~~~~~~~iki~~i~~~ii~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~ 205 (456)
T PRK10238 129 SAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIFGGWLLFSGNGGPQATVSNLWDQ---GGFLPHGFTGLVMM 205 (456)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccccccCCC---CCCccccHHHHHHH
Confidence 4555566777888888766554 22333333233222334332221 1121 11111010 00111222232 23
Q ss_pred ccceeeeecchhh--hhccCCCCCccchhhhhhhhHhHHHHHhhcc
Q 006110 162 LGGCVLCITGAEA--MFADLGHFSVKAIQIAFTLVVFPCLLLAYMG 205 (661)
Q Consensus 162 LG~VvL~vTG~EA--LyADmGHFg~~~Ir~aw~~~V~P~L~L~Y~G 205 (661)
++.++.+.+|-|+ ..|.=-+=.+|.+-+|=.. +.-.+.+.|++
T Consensus 206 ~~~~~~af~G~e~~~~~aeE~knP~r~iPrAi~~-~~~~i~~~y~~ 250 (456)
T PRK10238 206 MAIIMFSFGGLELVGITAAEADNPEQSIPKATNQ-VIYRILIFYIG 250 (456)
T ss_pred HHHHHHHhcCHHHHHHHHHhhcChhhHHHHHHHH-HHHHHHHHHHH
Confidence 5567778888887 3444445666777777543 33444455654
No 23
>TIGR00908 2A0305 ethanolamine permease. The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily.
Probab=62.14 E-value=1.1e+02 Score=33.89 Aligned_cols=24 Identities=13% Similarity=0.505 Sum_probs=17.1
Q ss_pred hhHHHHHHHHHHhhhccccccccc
Q 006110 88 IVSIIILVALFSIQRFGTGKVGFM 111 (661)
Q Consensus 88 ~is~~ILv~LF~iQ~~GT~kvg~~ 111 (661)
.+++++++.+..+.-+|....+++
T Consensus 123 ~~~~~~~~~~~~ln~~g~~~~~~i 146 (442)
T TIGR00908 123 LAALVFYIVFIGINILGVGEAAKL 146 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhH
Confidence 355666667778888888777664
No 24
>PRK11021 putative transporter; Provisional
Probab=59.98 E-value=2.5e+02 Score=30.85 Aligned_cols=28 Identities=14% Similarity=0.303 Sum_probs=21.5
Q ss_pred eehhHHHHHHHHHHhhhccccccccchh
Q 006110 86 LVIVSIIILVALFSIQRFGTGKVGFMFA 113 (661)
Q Consensus 86 Vv~is~~ILv~LF~iQ~~GT~kvg~~Fg 113 (661)
..++++++++.+..+.-+|....+++-.
T Consensus 115 ~~~~~~~~~~~~~~ln~~Gv~~~~~~~~ 142 (410)
T PRK11021 115 LLLAELLTLALLWLLNLRGASSSANLQT 142 (410)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 3567788888889999999888776443
No 25
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=57.55 E-value=1.1e+02 Score=34.40 Aligned_cols=24 Identities=13% Similarity=0.228 Sum_probs=16.8
Q ss_pred hhHHHHHHHHHHhhhccccccccc
Q 006110 88 IVSIIILVALFSIQRFGTGKVGFM 111 (661)
Q Consensus 88 ~is~~ILv~LF~iQ~~GT~kvg~~ 111 (661)
.+++++++.++.+.-+|+...+++
T Consensus 131 ~~~~~~~~~~~~ln~~Gi~~~~~i 154 (473)
T TIGR00905 131 LGASVLLWVFTFLVLRGVRQAAFI 154 (473)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHH
Confidence 345666667788899998766543
No 26
>PRK10249 phenylalanine transporter; Provisional
Probab=56.94 E-value=1.4e+02 Score=33.46 Aligned_cols=103 Identities=16% Similarity=0.133 Sum_probs=52.3
Q ss_pred hHHHHHHHHHHhhhccccccccc---hhhHHHHHHHHHHhhhhhhccccCcceeeecChHHHHHH--HHhcCcch-hhhc
Q 006110 89 VSIIILVALFSIQRFGTGKVGFM---FAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLF--FKKNGKDA-WSAL 162 (661)
Q Consensus 89 is~~ILv~LF~iQ~~GT~kvg~~---FgPIm~~WF~~i~~~Gi~ni~~~~p~Vl~AlnP~yai~f--~~~~~~~~-~~~L 162 (661)
++.++++++..+.-+|....|++ +.=+.++..+.+.++|+.-+...++.- ..++.+.... +..+++.+ +..+
T Consensus 138 ~~~~~~~l~~~lN~~gv~~~~~i~~~~~~ikv~~i~~~i~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~ 215 (458)
T PRK10249 138 WAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGLWLLFSGHGGE--KASIDNLWRYGGFFATGWNGLILSL 215 (458)
T ss_pred HHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC--CCChhhccCCCCCCCCcHHHHHHHH
Confidence 35666777778888888766643 333334444444455554333211110 1111111000 01234444 3556
Q ss_pred cceeeeecchhhh--hccCCCCCccchhhhhhh
Q 006110 163 GGCVLCITGAEAM--FADLGHFSVKAIQIAFTL 193 (661)
Q Consensus 163 G~VvL~vTG~EAL--yADmGHFg~~~Ir~aw~~ 193 (661)
..++.+.+|-|.. .|+=-+-.+|.|-+|=..
T Consensus 216 ~~~~~af~G~e~~~~~a~E~~~P~k~iPrai~~ 248 (458)
T PRK10249 216 AVIMFSFGGLELIGITAAEARDPEKSIPKAVNQ 248 (458)
T ss_pred HHHHHHHcCHHHHHHHHHHhcCHhhHHHHHHHH
Confidence 6677888898865 555556666776665443
No 27
>PRK10746 putative transport protein YifK; Provisional
Probab=52.14 E-value=2.8e+02 Score=31.36 Aligned_cols=25 Identities=16% Similarity=0.086 Sum_probs=16.6
Q ss_pred ccHHHHHHHHHHHHHHHHhhhHHHH
Q 006110 367 GWLPLAFASVFLCVMYIWNYGSVLK 391 (661)
Q Consensus 367 GW~pl~ia~~~~~iM~~W~~G~~~~ 391 (661)
.......+.+++.++..+....+.-
T Consensus 427 ~~~~~~~~~~~~~~~~~~y~~~~~~ 451 (461)
T PRK10746 427 TRMSLFVGIIFLLAVTLIYKVFGLN 451 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4567777777777777766654433
No 28
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=51.87 E-value=62 Score=32.78 Aligned_cols=21 Identities=5% Similarity=0.287 Sum_probs=17.4
Q ss_pred CccHHHHHHHHHHHHHHHHhh
Q 006110 366 GGWLPLAFASVFLCVMYIWNY 386 (661)
Q Consensus 366 GGW~pl~ia~~~~~iM~~W~~ 386 (661)
.+|+-+++|++.+.+-+-|++
T Consensus 179 ~~~~~iiig~i~~~~~~~lkk 199 (206)
T PF06570_consen 179 PPWVYIIIGVIAFALRFYLKK 199 (206)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 389999999999998876654
No 29
>COG4059 MtrE Tetrahydromethanopterin S-methyltransferase, subunit E [Coenzyme metabolism]
Probab=51.60 E-value=15 Score=38.38 Aligned_cols=31 Identities=26% Similarity=0.667 Sum_probs=26.4
Q ss_pred ccCCccHHHHHHHHHHHHHHHHhhhHHHHHH
Q 006110 363 IAEGGWLPLAFASVFLCVMYIWNYGSVLKYR 393 (661)
Q Consensus 363 v~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~ 393 (661)
=-+|||..++++.++..+...|++.-+.+.+
T Consensus 258 ~i~~G~isiv~Gliiv~iLii~N~kvEv~AR 288 (304)
T COG4059 258 SIQGGWISIVAGLIIVLILIIWNRKVEVKAR 288 (304)
T ss_pred ccccchhhhHHHHHHHHHHHHhcchhhhhhh
Confidence 3489999999999999999999997666543
No 30
>PRK11357 frlA putative fructoselysine transporter; Provisional
Probab=44.11 E-value=1.4e+02 Score=33.08 Aligned_cols=43 Identities=7% Similarity=0.139 Sum_probs=24.5
Q ss_pred hhHHHHHHHHHHhhhccccc---cccchhhHHHHHHHHHHhhhhhh
Q 006110 88 IVSIIILVALFSIQRFGTGK---VGFMFAPVLALWFFSLGSIGLYN 130 (661)
Q Consensus 88 ~is~~ILv~LF~iQ~~GT~k---vg~~FgPIm~~WF~~i~~~Gi~n 130 (661)
.+.+++++.+..+.-+|.+. +...+.=+.++=++.+.++|++.
T Consensus 129 ~~~~~~~~~~~~ln~~gv~~~~~v~~~~~~~~~~~l~~~ii~g~~~ 174 (445)
T PRK11357 129 FIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFW 174 (445)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666667777888888754 33344433334344455555543
No 31
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter. Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009
Probab=43.49 E-value=3.2e+02 Score=31.33 Aligned_cols=48 Identities=15% Similarity=0.168 Sum_probs=24.8
Q ss_pred hhhhccceeeeecchhhh--hccCCCCCccchhhhhhhhHhHHHHHhhcc
Q 006110 158 AWSALGGCVLCITGAEAM--FADLGHFSVKAIQIAFTLVVFPCLLLAYMG 205 (661)
Q Consensus 158 ~~~~LG~VvL~vTG~EAL--yADmGHFg~~~Ir~aw~~~V~P~L~L~Y~G 205 (661)
++..+-+++.+.+|-|+. +|+==+-.+|.+-+|=...+.=+.++.++|
T Consensus 196 ~~~~~~~~~faf~G~E~~a~~a~E~knP~r~~PrAi~~~~i~~~~l~~l~ 245 (507)
T TIGR00910 196 TLVVFVAFIGAYMGVEASASHINELENPGRDYPLAMILLMIAAICLDAIG 245 (507)
T ss_pred HHHHHHHHHHHHhcHHHHHHHHHHccCCcccccHHHHHHHHHHHHHHHHH
Confidence 334444456678898865 444344555655555444333334443443
No 32
>PRK11049 D-alanine/D-serine/glycine permease; Provisional
Probab=43.20 E-value=3.8e+02 Score=30.21 Aligned_cols=108 Identities=13% Similarity=0.056 Sum_probs=47.8
Q ss_pred hhccceeeeecchhhh--hccCCCCCccchhhhhhhhHhHHHHHhhccchhhhc--cCccc---ccccccccc----cCc
Q 006110 160 SALGGCVLCITGAEAM--FADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLM--KYPDS---ANRIFYDSV----PDS 228 (661)
Q Consensus 160 ~~LG~VvL~vTG~EAL--yADmGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~Ll--~~p~~---~~npFf~~~----P~~ 228 (661)
..+..++.+.+|-|+. .|.==+-.+|.|.+|-.. +.-...+-|.-....+. .++++ .++||-... -++
T Consensus 215 ~~~~~~~~af~G~e~~~~~a~E~knP~r~iPrai~~-~~~~~~~~y~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~ 293 (469)
T PRK11049 215 AGFQIAVFAFVGIELVGTTAAETKDPEKSLPRAINS-IPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPA 293 (469)
T ss_pred HHHHHHHHHHhcHHHHHHHHHHhcCHhhHHHHHHHH-HHHHHHHHHHHHHHHHeeecCccccCccCCcHHHHHHHcCChh
Confidence 3445566677787754 233235556666666532 22233334443332222 12222 235653321 122
Q ss_pred chHHHHHHHHHHHHHhhhhhhhchhhHHHHHHHhCCCcce
Q 006110 229 LFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRL 268 (661)
Q Consensus 229 ~~~P~~vlAtlAtIIASQA~ISg~FSl~~Qai~Lg~~Pr~ 268 (661)
...-+.+++.++.+-+..+.+.+.=-+....-+-|.+|+.
T Consensus 294 ~~~~~~~~~~~s~~~~~~~~~~~~sR~l~a~ardg~lP~~ 333 (469)
T PRK11049 294 AASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKA 333 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence 2222223333333333333333333344444578999964
No 33
>TIGR00913 2A0310 amino acid permease (yeast).
Probab=42.35 E-value=2.8e+02 Score=31.12 Aligned_cols=32 Identities=19% Similarity=0.081 Sum_probs=18.5
Q ss_pred ccceeeeecchhhh--hccCCCCCccchhhhhhh
Q 006110 162 LGGCVLCITGAEAM--FADLGHFSVKAIQIAFTL 193 (661)
Q Consensus 162 LG~VvL~vTG~EAL--yADmGHFg~~~Ir~aw~~ 193 (661)
+..++.+.+|-|+. +|+==+-.+|.|-+|=..
T Consensus 203 ~~~~~~af~G~e~~~~~a~E~knP~r~iPrai~~ 236 (478)
T TIGR00913 203 FVTAAFSFGGTELVALTAGEAANPRKSIPRAAKR 236 (478)
T ss_pred HHHHHhhhccHHHHHHHHHhhcChhhHHHHHHHH
Confidence 33456777888753 444445556666666433
No 34
>KOG3643 consensus GABA receptor [Signal transduction mechanisms]
Probab=40.56 E-value=24 Score=40.17 Aligned_cols=101 Identities=21% Similarity=0.335 Sum_probs=62.8
Q ss_pred hhhhhchhhHHH-HHHHhCCCcceeEEeCCCccCC----ccccchHHHHHHHHhheeeEEeCCchhHHhhhhchhhhHHH
Q 006110 246 QAMISATFSCIK-QAMALGCFPRLKIIHTSRKRMG----QIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVML 320 (661)
Q Consensus 246 QA~ISg~FSl~~-Qai~Lg~~Pr~~i~hTS~~~~G----QIYiP~vNw~Lm~~~i~vv~~F~~s~~l~~AYGiAVt~~M~ 320 (661)
|=.|.+.+...+ ..-..|-.||+.+...=++..| |+|+|.+= +..+-=|..-=|-++-++=-.+++|.+..
T Consensus 209 qFti~~~~~~s~~~~~sTG~Y~RL~l~F~l~Rnigf~ilQ~y~PS~L----iVilSWVSFWin~~a~pARv~lGITTVLT 284 (459)
T KOG3643|consen 209 QFTITEYHVTSRLVSFSTGNYSRLSLSFQLRRNIGFYILQTYIPSTL----IVILSWVSFWINRDASPARVALGITTVLT 284 (459)
T ss_pred ceEEEEEEEEEEEEEEccccceeEEEEEEEEeeccEEEEeeecchhh----hhHHhHhHhhhccccchhheeeceehHHh
Confidence 344555554432 2234899999999998888888 99999862 11111222233556667778899999999
Q ss_pred HHHHHHHHHHH-----HHHhcchHHHHHHHHHHHH
Q 006110 321 VSSTLVTIVML-----LIWQTNLLLVLCFPLVFGS 350 (661)
Q Consensus 321 iTT~L~~~v~~-----~~w~~~~~~~~~~~~~f~~ 350 (661)
|||++...=.. ++.-.-+.+.++|+.+|++
T Consensus 285 MTTl~t~~n~slPrvSYVKAiDiYL~vCFvfVF~s 319 (459)
T KOG3643|consen 285 MTTLMTSTNESLPRVSYVKAIDVYLGVCFVFVFLS 319 (459)
T ss_pred HHHHHhhhhccCCCccceeeehhhhhHHHHHHHHH
Confidence 99988765221 1222233445666666655
No 35
>KOG4742 consensus Predicted chitinase [General function prediction only]
Probab=39.38 E-value=13 Score=40.04 Aligned_cols=33 Identities=18% Similarity=0.327 Sum_probs=25.4
Q ss_pred CCCCCccchhhhhhhhHhHHHHHhhccchh-----hhccCccccc-cc
Q 006110 179 LGHFSVKAIQIAFTLVVFPCLLLAYMGQAA-----YLMKYPDSAN-RI 220 (661)
Q Consensus 179 mGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA-----~Ll~~p~~~~-np 220 (661)
=++|||.+||++|-. ..||+. =||+|||-+. ||
T Consensus 172 k~Y~GRG~iQlsWNy---------NYG~ag~alg~dLL~~Pe~V~~np 210 (286)
T KOG4742|consen 172 KSYYGRGPIQLSWNY---------NYGAAGKALGLDLLRNPELVAMNP 210 (286)
T ss_pred CcccccCcccccccc---------cccHhHhhcCchhhcCcchhccCc
Confidence 469999999999988 345543 4788999776 54
No 36
>TIGR01773 GABAperm gamma-aminobutyrate permease. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity.
Probab=38.22 E-value=6e+02 Score=28.26 Aligned_cols=101 Identities=15% Similarity=0.118 Sum_probs=46.9
Q ss_pred hhHHHHHHHHHHhhhccccccccchhh---HHHHHHHHHHhhhhhhccccCcce----eeecChHHHHHHHHhcCcc-hh
Q 006110 88 IVSIIILVALFSIQRFGTGKVGFMFAP---VLALWFFSLGSIGLYNLVKYDISV----VRAFNPIYIYLFFKKNGKD-AW 159 (661)
Q Consensus 88 ~is~~ILv~LF~iQ~~GT~kvg~~FgP---Im~~WF~~i~~~Gi~ni~~~~p~V----l~AlnP~yai~f~~~~~~~-~~ 159 (661)
.+++++++.+..+.-+|+...+.+--. +.++-++.+.++|+..+...+|.. +.-+.+.-. +..++.. -+
T Consensus 128 ~~~~~~~~~~~~~n~~gv~~~~~~~~~~~~~ki~~l~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~~~~ 204 (452)
T TIGR01773 128 LFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAIIAFIILGAVAIFGFAPGSEVSGFSNLTGKGG---FFPNGIGAVL 204 (452)
T ss_pred HHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCccccccCCCC---cCcccHHHHH
Confidence 356666666777888898777655433 222233333444544333222221 111111000 0112222 12
Q ss_pred hhccceeeeecchhhh--hccCCCCCccchhhhh
Q 006110 160 SALGGCVLCITGAEAM--FADLGHFSVKAIQIAF 191 (661)
Q Consensus 160 ~~LG~VvL~vTG~EAL--yADmGHFg~~~Ir~aw 191 (661)
..+...+.+.+|-|+. +|+==+-.+|.|.+|=
T Consensus 205 ~a~~~~~~af~G~e~~~~~a~E~k~P~r~iPrAi 238 (452)
T TIGR01773 205 LAILVTMFSFMGTEIVTIAAAESSNPIKSITRAT 238 (452)
T ss_pred HHHHHHHHHhccHHHHhHHHHhhcChhhHHHHHH
Confidence 3445566777888864 2332334455666664
No 37
>PRK10580 proY putative proline-specific permease; Provisional
Probab=34.88 E-value=4.2e+02 Score=29.63 Aligned_cols=99 Identities=14% Similarity=0.127 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhhhcccccccc---chhhHHHHHHHHHHhhhhhhc---ccc--Ccceee-ecChHHHHHHHHhcCcchh-
Q 006110 90 SIIILVALFSIQRFGTGKVGF---MFAPVLALWFFSLGSIGLYNL---VKY--DISVVR-AFNPIYIYLFFKKNGKDAW- 159 (661)
Q Consensus 90 s~~ILv~LF~iQ~~GT~kvg~---~FgPIm~~WF~~i~~~Gi~ni---~~~--~p~Vl~-AlnP~yai~f~~~~~~~~~- 159 (661)
.+++++.++.++-+|+...|+ .+.-+.++-++.+.++|+.-+ ... +|.-.. .+++. .++ .++..++
T Consensus 127 ~~~~~~l~~~ln~~gv~~~~~~~~~~~~~~~~~l~~~ii~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~-~~g~~~~~ 202 (457)
T PRK10580 127 VLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVAGIGIIIWGIGNGGQPTGIHNLWSNG---GFF-SNGWLGMV 202 (457)
T ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCccccCCCC---CCC-CcchHHHH
Confidence 445566678889999765554 444444444444444443211 110 111000 00000 011 2233232
Q ss_pred hhccceeeeecchhhh--hccCCCCCccchhhhhh
Q 006110 160 SALGGCVLCITGAEAM--FADLGHFSVKAIQIAFT 192 (661)
Q Consensus 160 ~~LG~VvL~vTG~EAL--yADmGHFg~~~Ir~aw~ 192 (661)
..+..++.+.+|-|+. .|.=-+-.+|.|.+|=.
T Consensus 203 ~~~~~~~fsf~G~e~~~~~a~E~knP~k~iPrAi~ 237 (457)
T PRK10580 203 MSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAIN 237 (457)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHhcChhhHHHHHHH
Confidence 3455667788888865 33333556666666644
No 38
>PRK10644 arginine:agmatin antiporter; Provisional
Probab=33.05 E-value=2.9e+02 Score=30.77 Aligned_cols=23 Identities=9% Similarity=0.231 Sum_probs=16.0
Q ss_pred hHHHHHHHHHHhhhccccccccc
Q 006110 89 VSIIILVALFSIQRFGTGKVGFM 111 (661)
Q Consensus 89 is~~ILv~LF~iQ~~GT~kvg~~ 111 (661)
+.+++++++..+.-+|+...+++
T Consensus 128 ~~~~~~~~~~~ln~~gvk~~~~i 150 (445)
T PRK10644 128 TCVVVLWIFVLLNIVGPKMITRV 150 (445)
T ss_pred HHHHHHHHHHHHHHhchHHHHHH
Confidence 45566667778888898766543
No 39
>PRK11387 S-methylmethionine transporter; Provisional
Probab=32.82 E-value=7.6e+02 Score=27.80 Aligned_cols=21 Identities=10% Similarity=0.180 Sum_probs=12.8
Q ss_pred HHHHHHHHHHhhhcccccccc
Q 006110 90 SIIILVALFSIQRFGTGKVGF 110 (661)
Q Consensus 90 s~~ILv~LF~iQ~~GT~kvg~ 110 (661)
.+++++.+..+.-+|....++
T Consensus 133 ~~~~~~~~~~in~~gvk~~~~ 153 (471)
T PRK11387 133 CLLFCALIFGLNVVSTRFFAE 153 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHH
Confidence 344445566777788766553
No 40
>KOG3145 consensus Cystine transporter Cystinosin [Amino acid transport and metabolism]
Probab=32.59 E-value=38 Score=36.98 Aligned_cols=36 Identities=22% Similarity=0.609 Sum_probs=27.5
Q ss_pred HhcCcchhhhccceeeeecchhh-----------------hhccCCCCCccchh
Q 006110 152 KKNGKDAWSALGGCVLCITGAEA-----------------MFADLGHFSVKAIQ 188 (661)
Q Consensus 152 ~~~~~~~~~~LG~VvL~vTG~EA-----------------LyADmGHFg~~~Ir 188 (661)
.|....|| +.|+|+|=+|||-| .|+|+|-||-.-+.
T Consensus 288 tRKSt~gw-sIgnIlLDfTGG~~slLQMilQ~~N~~sw~~f~gnp~KfGLg~vS 340 (372)
T KOG3145|consen 288 TRKSTVGW-SIGNILLDFTGGTASLLQMILQSSNDNSWDTFYGNPGKFGLGLVS 340 (372)
T ss_pred eecccccc-ccccEEEEecccHHHHHHHHHHHhccccHHHHhcCchhhhhhhHH
Confidence 34445676 57999999999965 68999999966543
No 41
>TIGR02121 Na_Pro_sym sodium/proline symporter. This family consists of the sodium/proline symporter (proline permease) from a number of Gram-negative and Gram-positive bacteria and from the archaeal genus Methanosarcina. Using the related pantothenate permease as an outgroup, candidate sequences from Bifidobacterium longum and several from archaea are found to be outside the clade defined by known proline permeases. These sequences, scoring between 570 and -40, define the range between trusted and noise cutoff scores.
Probab=27.60 E-value=7.7e+02 Score=28.10 Aligned_cols=39 Identities=18% Similarity=0.225 Sum_probs=18.3
Q ss_pred ccCcchHHHHHHHHHHHHHhhhhhhhchhhHHHHHHHhCCCcc
Q 006110 225 VPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPR 267 (661)
Q Consensus 225 ~P~~~~~P~~vlAtlAtIIASQA~ISg~FSl~~Qai~Lg~~Pr 267 (661)
.|+++ --+++.+.+|++.. ..++...-....+..+...+
T Consensus 315 ~p~~l-~gl~~a~ilaA~mS---T~~s~l~s~ss~~~~Diy~~ 353 (487)
T TIGR02121 315 FHPWI-AGILLAAILAAIMS---TISSQLLVSSSALTEDFYKA 353 (487)
T ss_pred ccHHH-HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
Confidence 35442 33444455555444 34554444445555554444
No 42
>TIGR03428 ureacarb_perm permease, urea carboxylase system. A number of bacteria obtain nitrogen by biotin- and ATP-dependent urea degradation system distinct from urease. The two characterized proteins of this system are the enzymes urea carboxylase and allophanate hydrolase, but other, uncharacterized proteins co-occur as genes encoded nearby in multiple organisms. This family includes predicted permeases of the amino acid permease family, likely to transport either urea or a compound from which urea is derived. It is found so far only Actinobacteria, whereas a number of other species with the urea carboxylase have an adjacent ABC transporter operon.
Probab=26.27 E-value=9.7e+02 Score=26.97 Aligned_cols=25 Identities=20% Similarity=0.236 Sum_probs=17.4
Q ss_pred eehhHHHHHHHHHHhhhcccccccc
Q 006110 86 LVIVSIIILVALFSIQRFGTGKVGF 110 (661)
Q Consensus 86 Vv~is~~ILv~LF~iQ~~GT~kvg~ 110 (661)
...++++++++...+.-+|+...++
T Consensus 144 ~~~~~~~~~~~~~~in~~g~k~~~~ 168 (475)
T TIGR03428 144 AVLLGSVLLVLTTVINCIGVEWMSR 168 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 3456666777777888889776554
No 43
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=24.82 E-value=1.4e+02 Score=30.56 Aligned_cols=60 Identities=22% Similarity=0.305 Sum_probs=38.7
Q ss_pred hhhhhhHhHHHHHhhccchhhh-ccCcccccccccccccCcchHHHHHHHHHHHHHhhhhhhhchhhHHHHH
Q 006110 189 IAFTLVVFPCLLLAYMGQAAYL-MKYPDSANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQA 259 (661)
Q Consensus 189 ~aw~~~V~P~L~L~Y~GQgA~L-l~~p~~~~npFf~~~P~~~~~P~~vlAtlAtIIASQA~ISg~FSl~~Qa 259 (661)
+|=+.+=+|||+.+|+ +.+ +.||.+..| -.+-+--++.|+..=++-||+ +|-.|+.+..-
T Consensus 88 iAs~llP~PsLVIaYC---l~mqi~~~~~~~~-------~gMsIvcv~~Si~ti~~~~~s-~s~~~~ti~yI 148 (189)
T PF05313_consen 88 IASLLLPFPSLVIAYC---LSMQIYNPGANNN-------VGMSIVCVIMSIITIIVNSVS-GSSGAYTISYI 148 (189)
T ss_pred HHHHHcCccHHHHHHH---HHheeecCCCcce-------ehhHHHHHHHHHHHHHHHhhh-HhHHHHHHHHH
Confidence 4445566899999995 444 678887666 344444555555555666777 66666666543
No 44
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=24.32 E-value=81 Score=24.86 Aligned_cols=26 Identities=27% Similarity=0.446 Sum_probs=12.8
Q ss_pred HHHHHHHhhhHHHHHHHHHhhcCChH
Q 006110 378 LCVMYIWNYGSVLKYRSEVREKISMD 403 (661)
Q Consensus 378 ~~iM~~W~~G~~~~~~~~~~~~~~~~ 403 (661)
|.....|-+-++++.+++....+|++
T Consensus 22 F~gi~~w~~~~~~k~~~e~aa~lpl~ 47 (49)
T PF05545_consen 22 FIGIVIWAYRPRNKKRFEEAANLPLD 47 (49)
T ss_pred HHHHHHHHHcccchhhHHHHHccCcc
Confidence 33334444444444445555566655
No 45
>TIGR01940 nqrE NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit. This model represents the NqrE subunit of the six-protein, Na(+)-pumping NADH-quinone reductase of a number of marine and pathogenic Gram-negative bacteria. This oxidoreductase complex functions primarily as a sodium ion pump.
Probab=21.50 E-value=2.6e+02 Score=28.84 Aligned_cols=47 Identities=11% Similarity=0.287 Sum_probs=29.9
Q ss_pred HHHHHHHhheeeEEeCCchhHHhhh--hchhhhHHHHHHHHHHHHHHHH
Q 006110 287 NWFLMIMCVVVVSIFQSTTDIANAY--GIAEVGVMLVSSTLVTIVMLLI 333 (661)
Q Consensus 287 Nw~Lm~~~i~vv~~F~~s~~l~~AY--GiAVt~~M~iTT~L~~~v~~~~ 333 (661)
|-..+.-.+.+.-...-|+++.+|- |+||+.+|.+++.+...+-..+
T Consensus 14 ~N~vl~~~LGlCp~l~vs~~~~~a~gmGlAvtfV~~~s~~~~~~i~~~i 62 (200)
T TIGR01940 14 ENMALSFFLGMCTFLAVSKKVSTAFGLGVAVTFVLTITVPINNLIYTYI 62 (200)
T ss_pred hhHHHHHHHhcCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333333344444445566666665 6788999999998888876654
No 46
>PF00324 AA_permease: Amino acid permease; InterPro: IPR004841 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell. A number of such proteins have been found to be evolutionary related [], [], []. These proteins seem to contain up to 12 transmembrane segments. The best conserved region in this family is located in the second transmembrane segment. This domain is found in a wide variety of permeases, as well as several hypothetical proteins. ; GO: 0006810 transport, 0055085 transmembrane transport, 0016020 membrane
Probab=20.84 E-value=75 Score=35.66 Aligned_cols=36 Identities=28% Similarity=0.242 Sum_probs=22.4
Q ss_pred hhhhccceeeeecchh--hhhccCCCCCccchhhhhhh
Q 006110 158 AWSALGGCVLCITGAE--AMFADLGHFSVKAIQIAFTL 193 (661)
Q Consensus 158 ~~~~LG~VvL~vTG~E--ALyADmGHFg~~~Ir~aw~~ 193 (661)
-|..+.-++.+.+|-| +.+|+==.=.+|.|.+|-..
T Consensus 202 ~~~~~~~~~~af~G~e~~a~~a~E~k~P~k~IPra~~~ 239 (478)
T PF00324_consen 202 FFAALVFAFFAFVGFESIAILAEEAKNPRKTIPRATLL 239 (478)
T ss_pred HHHhhhhhhcccccccccccccccCCCchhhhhhHhhh
Confidence 3556677788888888 34554445556666655444
No 47
>PF11827 DUF3347: Protein of unknown function (DUF3347); InterPro: IPR021782 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 169 to 570 amino acids in length.
Probab=20.68 E-value=42 Score=33.42 Aligned_cols=20 Identities=10% Similarity=0.317 Sum_probs=18.6
Q ss_pred ccchhhhccCcccccccccc
Q 006110 204 MGQAAYLMKYPDSANRIFYD 223 (661)
Q Consensus 204 ~GQgA~Ll~~p~~~~npFf~ 223 (661)
=||||+=|++-+.+.||||-
T Consensus 144 ~~kGa~WLs~~~~I~NPYfG 163 (174)
T PF11827_consen 144 NNKGAYWLSDSKEIKNPYFG 163 (174)
T ss_pred CCCCCeeCCCCCcCcCCCCc
Confidence 58999999999999999996
No 48
>PRK05151 electron transport complex protein RsxA; Provisional
Probab=20.21 E-value=3.2e+02 Score=28.01 Aligned_cols=47 Identities=19% Similarity=0.277 Sum_probs=30.9
Q ss_pred HHHHHHHhheeeEEeCCchhHHhhh--hchhhhHHHHHHHHHHHHHHHH
Q 006110 287 NWFLMIMCVVVVSIFQSTTDIANAY--GIAEVGVMLVSSTLVTIVMLLI 333 (661)
Q Consensus 287 Nw~Lm~~~i~vv~~F~~s~~l~~AY--GiAVt~~M~iTT~L~~~v~~~~ 333 (661)
|-..+.-.+.+.-...-|+++.+|. |+||+.+|.+++.+...+-..+
T Consensus 15 nN~vl~~~LG~Cp~laVs~~~~~a~gmGlav~fV~~~s~~~~~~i~~~i 63 (193)
T PRK05151 15 NNFVLVKFLGLCPFMGVSKKLETAIGMGLATTFVLTLASICAWLVNTYI 63 (193)
T ss_pred hhHHHHHHHhcCchhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333443444444455566677766 6788999999999888877655
Done!