BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006112
(660 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 111/283 (39%), Positives = 167/283 (59%), Gaps = 12/283 (4%)
Query: 336 FSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRN 394
FS KN+ +GG GKVY+G L +AVK++ + G + QF +E+ + HRN
Sbjct: 40 FSNKNIL--GRGGFGKVYKGRLADGTL-VAVKRLKEERXQGGELQFQTEVEMISMAVHRN 96
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYS--NTRPSLNWFQRFRIIKGVAFGLLYLH 452
L++LRG+C E LLVY YM NGS+ L ++P L+W +R RI G A GL YLH
Sbjct: 97 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH 156
Query: 453 EEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLR 512
+ + ++HRD+K AN+LLD + E +GDFGLA+L D+ + V GT+G++APE L
Sbjct: 157 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLS 216
Query: 513 NGRGTTSTDVYAFGVFMLEVACGRRPVQPGELD------LLDWVIDYWQKGDVLDASDPR 566
G+ + TDV+ +GV +LE+ G+R L LLDWV ++ + D
Sbjct: 217 TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVD 276
Query: 567 LEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLDGGAL 609
L+G Y +E++E ++++ L C+ S+P RP M +VV+ L+G L
Sbjct: 277 LQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL 319
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 111/294 (37%), Positives = 168/294 (57%), Gaps = 20/294 (6%)
Query: 335 RFSYKNLYKAT----------KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMK-QFVSE 383
RFS + L A+ +GG GKVY+G L +AVK++ + G + QF +E
Sbjct: 19 RFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXL-VAVKRLKEERTQGGELQFQTE 77
Query: 384 IVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYS--NTRPSLNWFQRFRII 441
+ + HRNL++LRG+C E LLVY YM NGS+ L ++P L+W +R RI
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 442 KGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVG 501
G A GL YLH+ + ++HRD+K AN+LLD + E +GDFGLA+L D+ + V G
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRG 197
Query: 502 TVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELD------LLDWVIDYWQ 555
+G++APE L G+ + TDV+ +GV +LE+ G+R L LLDWV +
Sbjct: 198 XIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 257
Query: 556 KGDVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLDGGAL 609
+ + D L+G Y +E++E ++++ L C+ S+P RP M +VV+ L+G L
Sbjct: 258 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/266 (36%), Positives = 148/266 (55%), Gaps = 11/266 (4%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G GKVY+GVL A++A+K+ +S G+++F +EI ++ RH +LV L G+C +
Sbjct: 50 GVFGKVYKGVLRDG-AKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108
Query: 407 ELLLVYDYMPNGSLDKILYSNTRP--SLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDI 464
E++L+Y YM NG+L + LY + P S++W QR I G A GL YLH + ++HRD+
Sbjct: 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDV 165
Query: 465 KPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVV-GTVGYLAPELLRNGRGTTSTDVY 523
K N+LLD + K+ DFG+++ + H VV GT+GY+ PE GR T +DVY
Sbjct: 166 KSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVY 225
Query: 524 AFGVFMLEVACGRRPVQ---PGEL-DLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
+FGV + EV C R + P E+ +L +W ++ G + DP L E +
Sbjct: 226 SFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKF 285
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLD 605
+ C + + RPSM V+ L+
Sbjct: 286 GDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 96/266 (36%), Positives = 147/266 (55%), Gaps = 11/266 (4%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G GKVY+GVL A++A+K+ +S G+++F +EI ++ RH +LV L G+C +
Sbjct: 50 GVFGKVYKGVLRDG-AKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108
Query: 407 ELLLVYDYMPNGSLDKILYSNTRP--SLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDI 464
E++L+Y YM NG+L + LY + P S++W QR I G A GL YLH + ++HRD+
Sbjct: 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDV 165
Query: 465 KPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVV-GTVGYLAPELLRNGRGTTSTDVY 523
K N+LLD + K+ DFG+++ H VV GT+GY+ PE GR T +DVY
Sbjct: 166 KSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVY 225
Query: 524 AFGVFMLEVACGRRPVQ---PGEL-DLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
+FGV + EV C R + P E+ +L +W ++ G + DP L E +
Sbjct: 226 SFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKF 285
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLD 605
+ C + + RPSM V+ L+
Sbjct: 286 GDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 145/280 (51%), Gaps = 34/280 (12%)
Query: 343 KATKGGSGKVYRGVLPSSHAEIAVKKVCH----DSDHGMKQFVSEIVSMGKLRHRNLVQL 398
K +GG G VY+G + ++ +AVKK+ ++ +QF EI M K +H NLV+L
Sbjct: 38 KMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 399 RGYCRRKGELLLVYDYMPNGS-LDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQ 457
G+ +L LVY YMPNGS LD++ + P L+W R +I +G A G+ +LHE
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH- 154
Query: 458 VVLHRDIKPANVLLDADLEGKLGDFGLARLYDH-GNDLHTTNVVGTVGYLAPELLRNGRG 516
+HRDIK AN+LLD K+ DFGLAR + + + +VGT Y+APE LR G
Sbjct: 155 --IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALR-GEI 211
Query: 517 TTSTDVYAFGVFMLEVACGRRPV-QPGELDLL-----------DWVIDYWQKGDVLDASD 564
T +D+Y+FGV +LE+ G V + E LL + DY K + DA
Sbjct: 212 TPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDK-KMNDADS 270
Query: 565 PRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYL 604
+E +Y + C H + RP +++V Q L
Sbjct: 271 TSVEAMY---------SVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 144/280 (51%), Gaps = 34/280 (12%)
Query: 343 KATKGGSGKVYRGVLPSSHAEIAVKKVCH----DSDHGMKQFVSEIVSMGKLRHRNLVQL 398
K +GG G VY+G + ++ +AVKK+ ++ +QF EI M K +H NLV+L
Sbjct: 38 KMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 399 RGYCRRKGELLLVYDYMPNGS-LDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQ 457
G+ +L LVY YMPNGS LD++ + P L+W R +I +G A G+ +LHE
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH- 154
Query: 458 VVLHRDIKPANVLLDADLEGKLGDFGLARLYDH-GNDLHTTNVVGTVGYLAPELLRNGRG 516
+HRDIK AN+LLD K+ DFGLAR + + +VGT Y+APE LR G
Sbjct: 155 --IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALR-GEI 211
Query: 517 TTSTDVYAFGVFMLEVACGRRPV-QPGELDLL-----------DWVIDYWQKGDVLDASD 564
T +D+Y+FGV +LE+ G V + E LL + DY K + DA
Sbjct: 212 TPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDK-KMNDADS 270
Query: 565 PRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYL 604
+E +Y + C H + RP +++V Q L
Sbjct: 271 TSVEAMY---------SVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 144/280 (51%), Gaps = 34/280 (12%)
Query: 343 KATKGGSGKVYRGVLPSSHAEIAVKKVCH----DSDHGMKQFVSEIVSMGKLRHRNLVQL 398
K +GG G VY+G + ++ +AVKK+ ++ +QF EI M K +H NLV+L
Sbjct: 32 KMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 89
Query: 399 RGYCRRKGELLLVYDYMPNGS-LDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQ 457
G+ +L LVY YMPNGS LD++ + P L+W R +I +G A G+ +LHE
Sbjct: 90 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH- 148
Query: 458 VVLHRDIKPANVLLDADLEGKLGDFGLARLYDH-GNDLHTTNVVGTVGYLAPELLRNGRG 516
+HRDIK AN+LLD K+ DFGLAR + + +VGT Y+APE LR G
Sbjct: 149 --IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALR-GEI 205
Query: 517 TTSTDVYAFGVFMLEVACGRRPV-QPGELDLL-----------DWVIDYWQKGDVLDASD 564
T +D+Y+FGV +LE+ G V + E LL + DY K + DA
Sbjct: 206 TPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDK-KMNDADS 264
Query: 565 PRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYL 604
+E +Y + C H + RP +++V Q L
Sbjct: 265 TSVEAMY---------SVASQCLHEKKNKRPDIKKVQQLL 295
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 140/274 (51%), Gaps = 22/274 (8%)
Query: 343 KATKGGSGKVYRGVLPSSHAEIAVKKVCH----DSDHGMKQFVSEIVSMGKLRHRNLVQL 398
K +GG G VY+G + ++ +AVKK+ ++ +QF EI K +H NLV+L
Sbjct: 29 KXGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVEL 86
Query: 399 RGYCRRKGELLLVYDYMPNGS-LDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQ 457
G+ +L LVY Y PNGS LD++ + P L+W R +I +G A G+ +LHE
Sbjct: 87 LGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH- 145
Query: 458 VVLHRDIKPANVLLDADLEGKLGDFGLARLYDH-GNDLHTTNVVGTVGYLAPELLRNGRG 516
+HRDIK AN+LLD K+ DFGLAR + + + +VGT Y APE LR G
Sbjct: 146 --IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALR-GEI 202
Query: 517 TTSTDVYAFGVFMLEVACGRRPV-QPGELDLL-----DWVIDYWQKGDVLDASDPRLEGI 570
T +D+Y+FGV +LE+ G V + E LL + + D +D +
Sbjct: 203 TPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKXNDADST 262
Query: 571 YVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYL 604
VE + + C H + RP +++V Q L
Sbjct: 263 SVEAXYSVASQ----CLHEKKNKRPDIKKVQQLL 292
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 106/209 (50%), Gaps = 26/209 (12%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKL----RHRNLVQLRGYC 402
GG GKVYR E+AVK HD D + Q + + KL +H N++ LRG C
Sbjct: 18 GGFGKVYRAFWIGD--EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVC 75
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPS---LNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
++ L LV ++ G L+++L P +NW + +A G+ YLH+E +
Sbjct: 76 LKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ------IARGMNYLHDEAIVPI 129
Query: 460 LHRDIKPANVLLDADLEG--------KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL 511
+HRD+K +N+L+ +E K+ DFGLAR + + + G ++APE++
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM---SAAGAYAWMAPEVI 186
Query: 512 RNGRGTTSTDVYAFGVFMLEVACGRRPVQ 540
R + +DV+++GV + E+ G P +
Sbjct: 187 RASMFSKGSDVWSYGVLLWELLTGEVPFR 215
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 106/199 (53%), Gaps = 7/199 (3%)
Query: 343 KATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMK--QFVSEIVSMGKLRHRNLVQLRG 400
K G G V+R S ++AVK + H + +F+ E+ M +LRH N+V G
Sbjct: 44 KIGAGSFGTVHRAEWHGS--DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 401 YCRRKGELLLVYDYMPNGSLDKILY-SNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
+ L +V +Y+ GSL ++L+ S R L+ +R + VA G+ YLH +
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPI 160
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRD+K N+L+D K+ DFGL+RL L + GT ++APE+LR+
Sbjct: 161 VHRDLKSPNLLVDKKYTVKVCDFGLSRL-KASXFLXSKXAAGTPEWMAPEVLRDEPSNEK 219
Query: 520 TDVYAFGVFMLEVACGRRP 538
+DVY+FGV + E+A ++P
Sbjct: 220 SDVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 107/199 (53%), Gaps = 7/199 (3%)
Query: 343 KATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMK--QFVSEIVSMGKLRHRNLVQLRG 400
K G G V+R S ++AVK + H + +F+ E+ M +LRH N+V G
Sbjct: 44 KIGAGSFGTVHRAEWHGS--DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 401 YCRRKGELLLVYDYMPNGSLDKILY-SNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
+ L +V +Y+ GSL ++L+ S R L+ +R + VA G+ YLH +
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPI 160
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HR++K N+L+D K+ DFGL+RL L + + GT ++APE+LR+
Sbjct: 161 VHRNLKSPNLLVDKKYTVKVCDFGLSRL-KASTFLSSKSAAGTPEWMAPEVLRDEPSNEK 219
Query: 520 TDVYAFGVFMLEVACGRRP 538
+DVY+FGV + E+A ++P
Sbjct: 220 SDVYSFGVILWELATLQQP 238
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 134/279 (48%), Gaps = 34/279 (12%)
Query: 347 GGSGKVYRGVLPSS--HAEIAVKKVCHDSDHGMKQ---FVSEIVSMGKLRHRNLVQLRGY 401
G G+VY+G+L +S E+ V + + KQ F+ E MG+ H N+++L G
Sbjct: 55 GEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGV 114
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ ++++ +YM NG+LDK L + Q +++G+A G+ YL +H
Sbjct: 115 ISKYKPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLA---NMNYVH 170
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTS 519
RD+ N+L++++L K+ DFGL+R+ + + T G + + APE + + T++
Sbjct: 171 RDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSA 230
Query: 520 TDVYAFGVFMLEVAC-GRRPVQPGELDLLDWVIDYWQKG--DVLDASDPRLEGIYVEEQM 576
+DV++FG+ M EV G RP YW+ +V+ A + +G + M
Sbjct: 231 SDVWSFGIVMWEVMTYGERP--------------YWELSNHEVMKAIN---DGFRLPTPM 273
Query: 577 EI---VLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPD 612
+ + +L + C RP +V LD PD
Sbjct: 274 DCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 144/299 (48%), Gaps = 41/299 (13%)
Query: 347 GGSGKVYRGVLP-SSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
G G+V G L S EI+V KV + ++ + F+ E MG+ H N+++L G
Sbjct: 56 GEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGV 114
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ +++V +YM NGSLD L + Q +++G+A G+ YL + +H
Sbjct: 115 VTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLS---DMGYVH 170
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTS 519
RD+ N+L++++L K+ DFGLAR+ + + T G + + +PE + + T++
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 520 TDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKG--DVLDASDPRLEGIYVEEQM 576
+DV+++G+ + EV + G RP YW+ DV+ A D EG + M
Sbjct: 231 SDVWSYGIVLWEVMSYGERP--------------YWEMSNQDVIKAVD---EGYRLPPPM 273
Query: 577 EI---VLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSSVFGVLTAKNEAPNN 632
+ + +L L C + + RP Q+V LD + N ++T+ P+N
Sbjct: 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD------KLIRNPGSLKIITSAAARPSN 326
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 120/218 (55%), Gaps = 20/218 (9%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGM-KQFVSEIVSMGKLRHRNLV 396
+K L K G VY+G+ ++ +A+K+V DS+ G + EI M +L+H N+V
Sbjct: 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIV 66
Query: 397 QLRGYCRRKGELLLVYDYMPN---GSLDKILYSNTRPSL-----NWFQRFRIIKGVAFGL 448
+L + +L LV+++M N +D NT L +FQ +++++G+AF
Sbjct: 67 RLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQ-WQLLQGLAF-- 123
Query: 449 LYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAP 508
HE +LHRD+KP N+L++ + KLGDFGLAR + + ++ VV T+ Y AP
Sbjct: 124 --CHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAP 177
Query: 509 ELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGELD 545
++L R +TS D+++ G + E+ G +P+ PG D
Sbjct: 178 DVLMGSRTYSTSIDIWSCGCILAEMITG-KPLFPGTND 214
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 120/259 (46%), Gaps = 15/259 (5%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G G+VY GV +AVK + D+ +++F+ E M +++H NLVQL G C R+
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
++ ++M G+L L R +N + ++ + YL ++ +HRD+
Sbjct: 88 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 144
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFG 526
N L+ + K+ DFGL+RL + + APE L + + +DV+AFG
Sbjct: 145 RNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 204
Query: 527 VFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGLFC 586
V + E+A PG ID Q ++L+ D R+E E E V +L C
Sbjct: 205 VLLWEIATYGMSPYPG--------IDLSQVYELLE-KDYRMER--PEGCPEKVYELMRAC 253
Query: 587 SHSNPDTRPSMRQVVQYLD 605
NP RPS ++ Q +
Sbjct: 254 WQWNPSDRPSFAEIHQAFE 272
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 120/259 (46%), Gaps = 15/259 (5%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G G+VY GV +AVK + D+ +++F+ E M +++H NLVQL G C R+
Sbjct: 25 GQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREP 83
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
++ ++M G+L L R +N + ++ + YL ++ +HRD+
Sbjct: 84 PFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 140
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFG 526
N L+ + K+ DFGL+RL + + APE L + + +DV+AFG
Sbjct: 141 RNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 200
Query: 527 VFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGLFC 586
V + E+A PG ID Q ++L+ D R+E E E V +L C
Sbjct: 201 VLLWEIATYGMSPYPG--------IDLSQVYELLE-KDYRMER--PEGCPEKVYELMRAC 249
Query: 587 SHSNPDTRPSMRQVVQYLD 605
NP RPS ++ Q +
Sbjct: 250 WQWNPSDRPSFAEIHQAFE 268
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 130/272 (47%), Gaps = 33/272 (12%)
Query: 347 GGSGKVYRGVLP---SSHAEIAVKKV-CHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
G SG+V G L +A+K + ++ + F+SE MG+ H N+++L G
Sbjct: 60 GDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV 119
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHR 462
R ++V +YM NGSLD L ++ Q +++GV G+ YL + +HR
Sbjct: 120 TRGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLS---DLGYVHR 175
Query: 463 DIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTST 520
D+ NVL+D++L K+ DFGL+R+ + D T G + + APE + ++++
Sbjct: 176 DLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSAS 235
Query: 521 DVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQ--KGDVLDASDPRLEGIYVEEQM- 576
DV++FGV M EV A G RP YW DV+ + + EG + M
Sbjct: 236 DVWSFGVVMWEVLAYGERP--------------YWNMTNRDVISSVE---EGYRLPAPMG 278
Query: 577 --EIVLKLGLFCSHSNPDTRPSMRQVVQYLDG 606
+ +L L C H + RP Q+V LD
Sbjct: 279 CPHALHQLMLDCWHKDRAQRPRFSQIVSVLDA 310
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 123/258 (47%), Gaps = 19/258 (7%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G G+VY GV +AVK + D+ +++F+ E M +++H NLVQL G C R+
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
++ ++M G+L L R +N + ++ + YL ++ +HRD+
Sbjct: 88 PFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 144
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYA 524
N L+ + K+ DFGL+RL D +T + + + APE L + + +DV+A
Sbjct: 145 RNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 525 FGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGL 584
FGV + E+A PG ID Q ++L+ D R+E E E V +L
Sbjct: 203 FGVLLWEIATYGMSPYPG--------IDLSQVYELLE-KDYRMER--PEGCPEKVYELMR 251
Query: 585 FCSHSNPDTRPSMRQVVQ 602
C NP RPS ++ Q
Sbjct: 252 ACWQWNPSDRPSFAEIHQ 269
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 144/299 (48%), Gaps = 41/299 (13%)
Query: 347 GGSGKVYRGVLP-SSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
G G+V G L S EI+V KV + ++ + F+ E MG+ H N+++L G
Sbjct: 56 GEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGV 114
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ +++V +YM NGSLD L + Q +++G+A G+ YL + +H
Sbjct: 115 VTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLS---DMGFVH 170
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTS 519
RD+ N+L++++L K+ DFGL+R+ + + T G + + +PE + + T++
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 520 TDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKG--DVLDASDPRLEGIYVEEQM 576
+DV+++G+ + EV + G RP YW+ DV+ A D EG + M
Sbjct: 231 SDVWSYGIVLWEVMSYGERP--------------YWEMSNQDVIKAVD---EGYRLPPPM 273
Query: 577 EI---VLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSSVFGVLTAKNEAPNN 632
+ + +L L C + + RP Q+V LD + N ++T+ P+N
Sbjct: 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD------KLIRNPGSLKIITSAAARPSN 326
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 123/258 (47%), Gaps = 19/258 (7%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G G+VY GV +AVK + D+ +++F+ E M +++H NLVQL G C R+
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
++ ++M G+L L R +N + ++ + YL ++ +HRD+
Sbjct: 88 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 144
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYA 524
N L+ + K+ DFGL+RL D +T + + + APE L + + +DV+A
Sbjct: 145 RNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 525 FGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGL 584
FGV + E+A PG ID Q ++L+ D R+E E E V +L
Sbjct: 203 FGVLLWEIATYGMSPYPG--------IDLSQVYELLE-KDYRMER--PEGCPEKVYELMR 251
Query: 585 FCSHSNPDTRPSMRQVVQ 602
C NP RPS ++ Q
Sbjct: 252 ACWQWNPSDRPSFAEIHQ 269
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 120/259 (46%), Gaps = 15/259 (5%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G G+VY GV +AVK + D+ +++F+ E M +++H NLVQL G C R+
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREP 84
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
++ ++M G+L L R +N + ++ + YL ++ +HRD+
Sbjct: 85 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 141
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFG 526
N L+ + K+ DFGL+RL + + APE L + + +DV+AFG
Sbjct: 142 RNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 201
Query: 527 VFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGLFC 586
V + E+A PG ID Q ++L+ D R+E E E V +L C
Sbjct: 202 VLLWEIATYGMSPYPG--------IDLSQVYELLE-KDYRMER--PEGCPEKVYELMRAC 250
Query: 587 SHSNPDTRPSMRQVVQYLD 605
NP RPS ++ Q +
Sbjct: 251 WQWNPSDRPSFAEIHQAFE 269
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 124/261 (47%), Gaps = 19/261 (7%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G G+VY GV +AVK + D+ +++F+ E M +++H NLVQL G C R+
Sbjct: 28 GQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREP 86
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
++ ++M G+L L R +N + ++ + YL ++ +HRD+
Sbjct: 87 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 143
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYA 524
N L+ + K+ DFGL+RL D +T + + + APE L + + +DV+A
Sbjct: 144 RNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 201
Query: 525 FGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGL 584
FGV + E+A PG ID Q ++L+ D R+E E E V +L
Sbjct: 202 FGVLLWEIATYGMSPYPG--------IDLSQVYELLE-KDYRMER--PEGCPEKVYELMR 250
Query: 585 FCSHSNPDTRPSMRQVVQYLD 605
C NP RPS ++ Q +
Sbjct: 251 ACWQWNPSDRPSFAEIHQAFE 271
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 130/272 (47%), Gaps = 33/272 (12%)
Query: 347 GGSGKVYRGVLP---SSHAEIAVKKV-CHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
G SG+V G L +A+K + ++ + F+SE MG+ H N+++L G
Sbjct: 60 GDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV 119
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHR 462
R ++V +YM NGSLD L ++ Q +++GV G+ YL + +HR
Sbjct: 120 TRGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLS---DLGYVHR 175
Query: 463 DIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTST 520
D+ NVL+D++L K+ DFGL+R+ + D T G + + APE + ++++
Sbjct: 176 DLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSAS 235
Query: 521 DVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQ--KGDVLDASDPRLEGIYVEEQM- 576
DV++FGV M EV A G RP YW DV+ + + EG + M
Sbjct: 236 DVWSFGVVMWEVLAYGERP--------------YWNMTNRDVISSVE---EGYRLPAPMG 278
Query: 577 --EIVLKLGLFCSHSNPDTRPSMRQVVQYLDG 606
+ +L L C H + RP Q+V LD
Sbjct: 279 CPHALHQLMLDCWHKDRAQRPRFSQIVSVLDA 310
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 120/259 (46%), Gaps = 15/259 (5%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G G+VY GV +AVK + D+ +++F+ E M +++H NLVQL G C R+
Sbjct: 25 GQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREP 83
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
++ ++M G+L L R +N + ++ + YL ++ +HRD+
Sbjct: 84 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 140
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFG 526
N L+ + K+ DFGL+RL + + APE L + + +DV+AFG
Sbjct: 141 RNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 200
Query: 527 VFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGLFC 586
V + E+A PG ID Q ++L+ D R+E E E V +L C
Sbjct: 201 VLLWEIATYGMSPYPG--------IDLSQVYELLE-KDYRMER--PEGCPEKVYELMRAC 249
Query: 587 SHSNPDTRPSMRQVVQYLD 605
NP RPS ++ Q +
Sbjct: 250 WQWNPSDRPSFAEIHQAFE 268
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 144/299 (48%), Gaps = 41/299 (13%)
Query: 347 GGSGKVYRGVLP-SSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
G G+V G L S EI+V KV + ++ + F+ E MG+ H N+++L G
Sbjct: 27 GEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGV 85
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ +++V +YM NGSLD L + Q +++G+A G+ YL + +H
Sbjct: 86 VTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLS---DMGYVH 141
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTS 519
RD+ N+L++++L K+ DFGL+R+ + + T G + + +PE + + T++
Sbjct: 142 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 201
Query: 520 TDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKG--DVLDASDPRLEGIYVEEQM 576
+DV+++G+ + EV + G RP YW+ DV+ A D EG + M
Sbjct: 202 SDVWSYGIVLWEVMSYGERP--------------YWEMSNQDVIKAVD---EGYRLPPPM 244
Query: 577 EI---VLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSSVFGVLTAKNEAPNN 632
+ + +L L C + + RP Q+V LD + N ++T+ P+N
Sbjct: 245 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD------KLIRNPGSLKIITSAAARPSN 297
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 144/299 (48%), Gaps = 41/299 (13%)
Query: 347 GGSGKVYRGVLP-SSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
G G+V G L S EI+V KV + ++ + F+ E MG+ H N+++L G
Sbjct: 56 GEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGV 114
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ +++V +YM NGSLD L + Q +++G+A G+ YL + +H
Sbjct: 115 VTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLS---DMGYVH 170
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTS 519
RD+ N+L++++L K+ DFGL+R+ + + T G + + +PE + + T++
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 520 TDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKG--DVLDASDPRLEGIYVEEQM 576
+DV+++G+ + EV + G RP YW+ DV+ A D EG + M
Sbjct: 231 SDVWSYGIVLWEVMSYGERP--------------YWEMSNQDVIKAVD---EGYRLPPPM 273
Query: 577 EI---VLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSSVFGVLTAKNEAPNN 632
+ + +L L C + + RP Q+V LD + N ++T+ P+N
Sbjct: 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD------KLIRNPGSLKIITSAAARPSN 326
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 124/261 (47%), Gaps = 19/261 (7%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G G+VY GV +AVK + D+ +++F+ E M +++H NLVQL G C R+
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
++ ++M G+L L R +N + ++ + YL ++ +HRD+
Sbjct: 88 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 144
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYA 524
N L+ + K+ DFGL+RL D +T + + + APE L + + +DV+A
Sbjct: 145 RNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 525 FGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGL 584
FGV + E+A PG ID Q ++L+ D R+E E E V +L
Sbjct: 203 FGVLLWEIATYGMSPYPG--------IDLSQVYELLE-KDYRMER--PEGCPEKVYELMR 251
Query: 585 FCSHSNPDTRPSMRQVVQYLD 605
C NP RPS ++ Q +
Sbjct: 252 ACWQWNPSDRPSFAEIHQAFE 272
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 123/258 (47%), Gaps = 19/258 (7%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G G+VY GV +AVK + D+ +++F+ E M +++H NLVQL G C R+
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
++ ++M G+L L R +N + ++ + YL ++ +HRD+
Sbjct: 83 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 139
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYA 524
N L+ + K+ DFGL+RL D +T + + + APE L + + +DV+A
Sbjct: 140 RNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 525 FGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGL 584
FGV + E+A PG ID Q ++L+ D R+E E E V +L
Sbjct: 198 FGVLLWEIATYGMSPYPG--------IDLSQVYELLE-KDYRMER--PEGCPEKVYELMR 246
Query: 585 FCSHSNPDTRPSMRQVVQ 602
C NP RPS ++ Q
Sbjct: 247 ACWQWNPSDRPSFAEIHQ 264
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 144/299 (48%), Gaps = 41/299 (13%)
Query: 347 GGSGKVYRGVLP-SSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
G G+V G L S EI+V KV + ++ + F+ E MG+ H N+++L G
Sbjct: 56 GEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGV 114
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ +++V +YM NGSLD L + Q +++G+A G+ YL + +H
Sbjct: 115 VTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLS---DMGYVH 170
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTS 519
RD+ N+L++++L K+ DFGL+R+ + + T G + + +PE + + T++
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 520 TDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKG--DVLDASDPRLEGIYVEEQM 576
+DV+++G+ + EV + G RP YW+ DV+ A D EG + M
Sbjct: 231 SDVWSYGIVLWEVMSYGERP--------------YWEMSNQDVIKAVD---EGYRLPPPM 273
Query: 577 EI---VLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSSVFGVLTAKNEAPNN 632
+ + +L L C + + RP Q+V LD + N ++T+ P+N
Sbjct: 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD------KLIRNPGSLKIITSAAARPSN 326
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 144/299 (48%), Gaps = 41/299 (13%)
Query: 347 GGSGKVYRGVLP-SSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
G G+V G L S EI+V KV + ++ + F+ E MG+ H N+++L G
Sbjct: 56 GEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGV 114
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ +++V +YM NGSLD L + Q +++G+A G+ YL + +H
Sbjct: 115 VTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLS---DMGYVH 170
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTS 519
RD+ N+L++++L K+ DFGL+R+ + + T G + + +PE + + T++
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 520 TDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKG--DVLDASDPRLEGIYVEEQM 576
+DV+++G+ + EV + G RP YW+ DV+ A D EG + M
Sbjct: 231 SDVWSYGIVLWEVMSYGERP--------------YWEMSNQDVIKAVD---EGYRLPPPM 273
Query: 577 EI---VLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSSVFGVLTAKNEAPNN 632
+ + +L L C + + RP Q+V LD + N ++T+ P+N
Sbjct: 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD------KLIRNPGSLKIITSAAARPSN 326
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 144/299 (48%), Gaps = 41/299 (13%)
Query: 347 GGSGKVYRGVLP-SSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
G G+V G L S EI+V KV + ++ + F+ E MG+ H N+++L G
Sbjct: 56 GEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGV 114
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ +++V +YM NGSLD L + Q +++G+A G+ YL + +H
Sbjct: 115 VTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLS---DMGYVH 170
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTS 519
RD+ N+L++++L K+ DFGL+R+ + + T G + + +PE + + T++
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 520 TDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKG--DVLDASDPRLEGIYVEEQM 576
+DV+++G+ + EV + G RP YW+ DV+ A D EG + M
Sbjct: 231 SDVWSYGIVLWEVMSYGERP--------------YWEMSNQDVIKAVD---EGYRLPPPM 273
Query: 577 EI---VLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSSVFGVLTAKNEAPNN 632
+ + +L L C + + RP Q+V LD + N ++T+ P+N
Sbjct: 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD------KLIRNPGSLKIITSAAARPSN 326
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 124/261 (47%), Gaps = 19/261 (7%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G G+VY GV +AVK + D+ +++F+ E M +++H NLVQL G C R+
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREP 84
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
++ ++M G+L L R +N + ++ + YL ++ +HRD+
Sbjct: 85 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 141
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYA 524
N L+ + K+ DFGL+RL D +T + + + APE L + + +DV+A
Sbjct: 142 RNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 199
Query: 525 FGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGL 584
FGV + E+A PG ID Q ++L+ D R+E E E V +L
Sbjct: 200 FGVLLWEIATYGMSPYPG--------IDLSQVYELLE-KDYRMER--PEGCPEKVYELMR 248
Query: 585 FCSHSNPDTRPSMRQVVQYLD 605
C NP RPS ++ Q +
Sbjct: 249 ACWQWNPSDRPSFAEIHQAFE 269
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 124/261 (47%), Gaps = 19/261 (7%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G G+VY GV +AVK + D+ +++F+ E M +++H NLVQL G C R+
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREP 84
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
++ ++M G+L L R +N + ++ + YL ++ +HRD+
Sbjct: 85 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 141
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYA 524
N L+ + K+ DFGL+RL D +T + + + APE L + + +DV+A
Sbjct: 142 RNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 199
Query: 525 FGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGL 584
FGV + E+A PG ID Q ++L+ D R+E E E V +L
Sbjct: 200 FGVLLWEIATYGMSPYPG--------IDLSQVYELLE-KDYRMER--PEGCPEKVYELMR 248
Query: 585 FCSHSNPDTRPSMRQVVQYLD 605
C NP RPS ++ Q +
Sbjct: 249 ACWQWNPSDRPSFAEIHQAFE 269
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 123/258 (47%), Gaps = 19/258 (7%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G G+VY GV +AVK + D+ +++F+ E M +++H NLVQL G C R+
Sbjct: 37 GQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREP 95
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
++ ++M G+L L R +N + ++ + YL ++ +HRD+
Sbjct: 96 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 152
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYA 524
N L+ + K+ DFGL+RL D +T + + + APE L + + +DV+A
Sbjct: 153 RNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 210
Query: 525 FGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGL 584
FGV + E+A PG ID Q ++L+ D R+E E E V +L
Sbjct: 211 FGVLLWEIATYGMSPYPG--------IDLSQVYELLE-KDYRMER--PEGCPEKVYELMR 259
Query: 585 FCSHSNPDTRPSMRQVVQ 602
C NP RPS ++ Q
Sbjct: 260 ACWQWNPSDRPSFAEIHQ 277
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 144/299 (48%), Gaps = 41/299 (13%)
Query: 347 GGSGKVYRGVLP-SSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
G G+V G L S EI+V KV + ++ + F+ E MG+ H N+++L G
Sbjct: 54 GEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGV 112
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ +++V +YM NGSLD L + Q +++G+A G+ YL + +H
Sbjct: 113 VTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLS---DMGYVH 168
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTS 519
RD+ N+L++++L K+ DFGL+R+ + + T G + + +PE + + T++
Sbjct: 169 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 228
Query: 520 TDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKG--DVLDASDPRLEGIYVEEQM 576
+DV+++G+ + EV + G RP YW+ DV+ A D EG + M
Sbjct: 229 SDVWSYGIVLWEVMSYGERP--------------YWEMSNQDVIKAVD---EGYRLPPPM 271
Query: 577 EI---VLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSSVFGVLTAKNEAPNN 632
+ + +L L C + + RP Q+V LD + N ++T+ P+N
Sbjct: 272 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD------KLIRNPGSLKIITSAAARPSN 324
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 144/299 (48%), Gaps = 41/299 (13%)
Query: 347 GGSGKVYRGVLP-SSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
G G+V G L S EI+V KV + ++ + F+ E MG+ H N+++L G
Sbjct: 44 GEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGV 102
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ +++V +YM NGSLD L + Q +++G+A G+ YL + +H
Sbjct: 103 VTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLS---DMGYVH 158
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTS 519
RD+ N+L++++L K+ DFGL+R+ + + T G + + +PE + + T++
Sbjct: 159 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 218
Query: 520 TDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKG--DVLDASDPRLEGIYVEEQM 576
+DV+++G+ + EV + G RP YW+ DV+ A D EG + M
Sbjct: 219 SDVWSYGIVLWEVMSYGERP--------------YWEMSNQDVIKAVD---EGYRLPPPM 261
Query: 577 EI---VLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSSVFGVLTAKNEAPNN 632
+ + +L L C + + RP Q+V LD + N ++T+ P+N
Sbjct: 262 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD------KLIRNPGSLKIITSAAARPSN 314
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 124/261 (47%), Gaps = 19/261 (7%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G G+VY GV +AVK + D+ +++F+ E M +++H NLVQL G C R+
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
++ ++M G+L L R +N + ++ + YL ++ +HRD+
Sbjct: 83 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 139
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYA 524
N L+ + K+ DFGL+RL D +T + + + APE L + + +DV+A
Sbjct: 140 RNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 525 FGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGL 584
FGV + E+A PG ID Q ++L+ D R+E E E V +L
Sbjct: 198 FGVLLWEIATYGMSPYPG--------IDLSQVYELLE-KDYRMER--PEGCPEKVYELMR 246
Query: 585 FCSHSNPDTRPSMRQVVQYLD 605
C NP RPS ++ Q +
Sbjct: 247 ACWQWNPSDRPSFAEIHQAFE 267
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 143/299 (47%), Gaps = 41/299 (13%)
Query: 347 GGSGKVYRGVLP-SSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
G G+V G L S EI+V KV + ++ + F+ E MG+ H N+++L G
Sbjct: 56 GEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGV 114
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ +++V +YM NGSLD L + Q +++G+A G+ YL + +H
Sbjct: 115 VTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLS---DMGYVH 170
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTS 519
RD+ N+L++++L K+ DFGL R+ + + T G + + +PE + + T++
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 520 TDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKG--DVLDASDPRLEGIYVEEQM 576
+DV+++G+ + EV + G RP YW+ DV+ A D EG + M
Sbjct: 231 SDVWSYGIVLWEVMSYGERP--------------YWEMSNQDVIKAVD---EGYRLPPPM 273
Query: 577 EI---VLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSSVFGVLTAKNEAPNN 632
+ + +L L C + + RP Q+V LD + N ++T+ P+N
Sbjct: 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD------KLIRNPGSLKIITSAAARPSN 326
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 126/266 (47%), Gaps = 19/266 (7%)
Query: 342 YKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+K G G+VY GV +AVK + D+ +++F+ E M +++H NLVQL G
Sbjct: 265 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
C R+ ++ ++M G+L L R +N + ++ + YL ++ +H
Sbjct: 324 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 380
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTS 519
R++ N L+ + K+ DFGL+RL D +T + + + APE L + +
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPESLAYNKFSIK 438
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
+DV+AFGV + E+A PG ID Q ++L+ D R+E E E V
Sbjct: 439 SDVWAFGVLLWEIATYGMSPYPG--------IDLSQVYELLE-KDYRME--RPEGCPEKV 487
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLD 605
+L C NP RPS ++ Q +
Sbjct: 488 YELMRACWQWNPSDRPSFAEIHQAFE 513
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 126/266 (47%), Gaps = 19/266 (7%)
Query: 342 YKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+K G G+VY GV +AVK + D+ +++F+ E M +++H NLVQL G
Sbjct: 223 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 281
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
C R+ ++ ++M G+L L R +N + ++ + YL ++ +H
Sbjct: 282 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 338
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTS 519
R++ N L+ + K+ DFGL+RL D +T + + + APE L + +
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPESLAYNKFSIK 396
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
+DV+AFGV + E+A PG ID Q ++L+ D R+E E E V
Sbjct: 397 SDVWAFGVLLWEIATYGMSPYPG--------IDLSQVYELLE-KDYRMER--PEGCPEKV 445
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLD 605
+L C NP RPS ++ Q +
Sbjct: 446 YELMRACWQWNPSDRPSFAEIHQAFE 471
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 124/261 (47%), Gaps = 19/261 (7%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G G+VY GV +AVK + D+ +++F+ E M +++H NLVQL G C R+
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
++ ++M G+L L R ++ + ++ + YL ++ +HRD+
Sbjct: 83 PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 139
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYA 524
N L+ + K+ DFGL+RL D +T + + + APE L + + +DV+A
Sbjct: 140 RNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 525 FGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGL 584
FGV + E+A PG ID Q ++L+ D R+E E E V +L
Sbjct: 198 FGVLLWEIATYGMSPYPG--------IDLSQVYELLE-KDYRMER--PEGCPEKVYELMR 246
Query: 585 FCSHSNPDTRPSMRQVVQYLD 605
C NP RPS ++ Q +
Sbjct: 247 ACWQWNPSDRPSFAEIHQAFE 267
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 124/261 (47%), Gaps = 19/261 (7%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G G+VY GV +AVK + D+ +++F+ E M +++H NLVQL G C R+
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
++ ++M G+L L R ++ + ++ + YL ++ +HRD+
Sbjct: 88 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 144
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYA 524
N L+ + K+ DFGL+RL D +T + + + APE L + + +DV+A
Sbjct: 145 RNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 525 FGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGL 584
FGV + E+A PG ID Q ++L+ D R+E E E V +L
Sbjct: 203 FGVLLWEIATYGMSPYPG--------IDLSQVYELLE-KDYRMER--PEGCPEKVYELMR 251
Query: 585 FCSHSNPDTRPSMRQVVQYLD 605
C NP RPS ++ Q +
Sbjct: 252 ACWQWNPSDRPSFAEIHQAFE 272
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 124/261 (47%), Gaps = 19/261 (7%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G G+VY GV +AVK + D+ +++F+ E M +++H NLVQL G C R+
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
++ ++M G+L L R ++ + ++ + YL ++ +HRD+
Sbjct: 83 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 139
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYA 524
N L+ + K+ DFGL+RL D +T + + + APE L + + +DV+A
Sbjct: 140 RNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 525 FGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGL 584
FGV + E+A PG ID Q ++L+ D R+E E E V +L
Sbjct: 198 FGVLLWEIATYGMSPYPG--------IDLSQVYELLE-KDYRMER--PEGCPEKVYELMR 246
Query: 585 FCSHSNPDTRPSMRQVVQYLD 605
C NP RPS ++ Q +
Sbjct: 247 ACWQWNPSDRPSFAEIHQAFE 267
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 124/261 (47%), Gaps = 19/261 (7%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G G+VY GV +AVK + D+ +++F+ E M +++H NLVQL G C R+
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
++ ++M G+L L R ++ + ++ + YL ++ +HRD+
Sbjct: 83 PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 139
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYA 524
N L+ + K+ DFGL+RL D +T + + + APE L + + +DV+A
Sbjct: 140 RNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 525 FGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGL 584
FGV + E+A PG ID Q ++L+ D R+E E E V +L
Sbjct: 198 FGVLLWEIATYGMSPYPG--------IDLSQVYELLE-KDYRMER--PEGCPEKVYELMR 246
Query: 585 FCSHSNPDTRPSMRQVVQYLD 605
C NP RPS ++ Q +
Sbjct: 247 ACWQWNPSDRPSFAEIHQAFE 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 124/261 (47%), Gaps = 19/261 (7%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G G+VY GV +AVK + D+ +++F+ E M +++H NLVQL G C R+
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
++ ++M G+L L R ++ + ++ + YL ++ +HRD+
Sbjct: 83 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 139
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYA 524
N L+ + K+ DFGL+RL D +T + + + APE L + + +DV+A
Sbjct: 140 RNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 525 FGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGL 584
FGV + E+A PG ID Q ++L+ D R+E E E V +L
Sbjct: 198 FGVLLWEIATYGMSPYPG--------IDLSQVYELLE-KDYRMER--PEGCPEKVYELMR 246
Query: 585 FCSHSNPDTRPSMRQVVQYLD 605
C NP RPS ++ Q +
Sbjct: 247 ACWQWNPSDRPSFAEIHQAFE 267
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 120/259 (46%), Gaps = 15/259 (5%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G G+VY GV +AVK + D+ +++F+ E M +++H NLVQL G C R+
Sbjct: 22 GQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREP 80
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
++ ++M G+L L R ++ + ++ + YL ++ +HRD+
Sbjct: 81 PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 137
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFG 526
N L+ + K+ DFGL+RL + + APE L + + +DV+AFG
Sbjct: 138 RNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 197
Query: 527 VFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGLFC 586
V + E+A PG ID Q ++L+ D R+E E E V +L C
Sbjct: 198 VLLWEIATYGMSPYPG--------IDPSQVYELLE-KDYRMER--PEGCPEKVYELMRAC 246
Query: 587 SHSNPDTRPSMRQVVQYLD 605
NP RPS ++ Q +
Sbjct: 247 WQWNPSDRPSFAEIHQAFE 265
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 143/299 (47%), Gaps = 41/299 (13%)
Query: 347 GGSGKVYRGVLP-SSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
G G+V G L S EI+V KV + ++ + F+ E MG+ H N+++L G
Sbjct: 56 GEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGV 114
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ +++V + M NGSLD L + Q +++G+A G+ YL + +H
Sbjct: 115 VTKSKPVMIVTEXMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLS---DMGAVH 170
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTS 519
RD+ N+L++++L K+ DFGL+R+ + + T G + + +PE + + T++
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 520 TDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKG--DVLDASDPRLEGIYVEEQM 576
+DV+++G+ + EV + G RP YW+ DV+ A D EG + M
Sbjct: 231 SDVWSYGIVLWEVMSYGERP--------------YWEMSNQDVIKAVD---EGYRLPPPM 273
Query: 577 EI---VLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSSVFGVLTAKNEAPNN 632
+ + +L L C + + RP Q+V LD + N ++T+ P+N
Sbjct: 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD------KLIRNPGSLKIITSAAARPSN 326
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 119/235 (50%), Gaps = 25/235 (10%)
Query: 378 KQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQR 437
+ F+SE MG+ H N++ L G + ++++ ++M NGSLD L N Q
Sbjct: 79 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG-QFTVIQL 137
Query: 438 FRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHT 496
+++G+A G+ YL + +HRD+ N+L++++L K+ DFGL+R L D +D
Sbjct: 138 VGMLRGIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 194
Query: 497 TNVVG---TVGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVID 552
T+ +G + + APE ++ + T+++DV+++G+ M EV + G RP
Sbjct: 195 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP-------------- 240
Query: 553 YWQ--KGDVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
YW DV++A + + + +L L C + + RP Q+V LD
Sbjct: 241 YWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 295
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 119/241 (49%), Gaps = 29/241 (12%)
Query: 373 SDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSL 432
++ + F+ E MG+ H N++ L G + +++V +YM NGSLD L N
Sbjct: 63 TEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKND-GQF 121
Query: 433 NWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGN 492
Q +++G++ G+ YL + +HRD+ N+L++++L K+ DFGL+R+ +
Sbjct: 122 TVIQLVGMLRGISAGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 178
Query: 493 DLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYAFGVFMLEVAC-GRRPVQPGELDLLDW 549
+ T G + + APE + + T+++DV+++G+ M EV G RP
Sbjct: 179 EAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP----------- 227
Query: 550 VIDYWQ--KGDVLDASDPRLEGIYVEEQMEI---VLKLGLFCSHSNPDTRPSMRQVVQYL 604
YW+ DV+ A + EG + M+ + +L L C ++RP ++V L
Sbjct: 228 ---YWEMTNQDVIKAVE---EGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNML 281
Query: 605 D 605
D
Sbjct: 282 D 282
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 126/266 (47%), Gaps = 19/266 (7%)
Query: 342 YKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+K G G+VY GV +AVK + D+ +++F+ E M +++H NLVQL G
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
C R+ ++ ++M G+L L R ++ + ++ + YL ++ +H
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 341
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTS 519
R++ N L+ + K+ DFGL+RL D +T + + + APE L + +
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPESLAYNKFSIK 399
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
+DV+AFGV + E+A PG ID Q ++L+ D R+E E E V
Sbjct: 400 SDVWAFGVLLWEIATYGMSPYPG--------IDLSQVYELLE-KDYRMER--PEGCPEKV 448
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLD 605
+L C NP RPS ++ Q +
Sbjct: 449 YELMRACWQWNPSDRPSFAEIHQAFE 474
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 143/299 (47%), Gaps = 41/299 (13%)
Query: 347 GGSGKVYRGVLP-SSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
G G+V G L S EI+V KV + ++ + F+ E MG+ H N+++L G
Sbjct: 27 GEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGV 85
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ +++V + M NGSLD L + Q +++G+A G+ YL + +H
Sbjct: 86 VTKSKPVMIVTEXMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLS---DMGYVH 141
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTS 519
RD+ N+L++++L K+ DFGL+R+ + + T G + + +PE + + T++
Sbjct: 142 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 201
Query: 520 TDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKG--DVLDASDPRLEGIYVEEQM 576
+DV+++G+ + EV + G RP YW+ DV+ A D EG + M
Sbjct: 202 SDVWSYGIVLWEVMSYGERP--------------YWEMSNQDVIKAVD---EGYRLPPPM 244
Query: 577 EI---VLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSSVFGVLTAKNEAPNN 632
+ + +L L C + + RP Q+V LD + N ++T+ P+N
Sbjct: 245 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD------KLIRNPGSLKIITSAAARPSN 297
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 117/241 (48%), Gaps = 29/241 (12%)
Query: 373 SDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSL 432
+D + F+SE MG+ H N++ L G + ++++ +YM NGSLD L N
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKND-GRF 128
Query: 433 NWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGN 492
Q +++G+ G+ YL + +HRD+ N+L++++L K+ DFG++R+ +
Sbjct: 129 TVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDP 185
Query: 493 DLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDW 549
+ T G + + APE + + T+++DV+++G+ M EV + G RP
Sbjct: 186 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP----------- 234
Query: 550 VIDYWQKG--DVLDASDPRLEGIYVEEQMEIVL---KLGLFCSHSNPDTRPSMRQVVQYL 604
YW DV+ A + EG + M+ + +L L C RP Q+V L
Sbjct: 235 ---YWDMSNQDVIKAIE---EGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 288
Query: 605 D 605
D
Sbjct: 289 D 289
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 120/259 (46%), Gaps = 15/259 (5%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G G+VY GV +AVK + D+ +++F+ E M +++H NLVQL G C R+
Sbjct: 22 GQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREP 80
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
++ ++M G+L L R ++ + ++ + YL ++ +HRD+
Sbjct: 81 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 137
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFG 526
N L+ + K+ DFGL+RL + + APE L + + +DV+AFG
Sbjct: 138 RNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 197
Query: 527 VFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGLFC 586
V + E+A PG ID Q ++L+ D R+E E E V +L C
Sbjct: 198 VLLWEIATYGMSPYPG--------IDPSQVYELLE-KDYRMER--PEGCPEKVYELMRAC 246
Query: 587 SHSNPDTRPSMRQVVQYLD 605
NP RPS ++ Q +
Sbjct: 247 WQWNPSDRPSFAEIHQAFE 265
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 139/281 (49%), Gaps = 30/281 (10%)
Query: 337 SYKNLYKATKGGS-GKVYRGVLPS---SHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKLR 391
SY + + G G+V RG L + + +A+K + ++ ++F+SE MG+
Sbjct: 16 SYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFE 75
Query: 392 HRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYL 451
H N+++L G ++++ ++M NG+LD L N Q +++G+A G+ YL
Sbjct: 76 HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLND-GQFTVIQLVGMLRGIASGMRYL 134
Query: 452 HEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVG---TVGYLA 507
E +HRD+ N+L++++L K+ DFGL+R L ++ +D T+ +G + + A
Sbjct: 135 A---EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTA 191
Query: 508 PELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKG--DVLDASD 564
PE + + T+++D +++G+ M EV + G RP YW DV++A +
Sbjct: 192 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERP--------------YWDMSNQDVINAIE 237
Query: 565 PRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
+ + +L L C + + RP QVV LD
Sbjct: 238 QDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALD 278
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 143/299 (47%), Gaps = 41/299 (13%)
Query: 347 GGSGKVYRGVLP-SSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
G G+V G L S EI+V KV + ++ + F+ E MG+ H N+++L G
Sbjct: 56 GEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGV 114
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ +++V + M NGSLD L + Q +++G+A G+ YL + +H
Sbjct: 115 VTKSKPVMIVTEXMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLS---DMGYVH 170
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTS 519
RD+ N+L++++L K+ DFGL+R+ + + T G + + +PE + + T++
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 520 TDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKG--DVLDASDPRLEGIYVEEQM 576
+DV+++G+ + EV + G RP YW+ DV+ A D EG + M
Sbjct: 231 SDVWSYGIVLWEVMSYGERP--------------YWEMSNQDVIKAVD---EGYRLPPPM 273
Query: 577 EI---VLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSSVFGVLTAKNEAPNN 632
+ + +L L C + + RP Q+V LD + N ++T+ P+N
Sbjct: 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD------KLIRNPGSLKIITSAAARPSN 326
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 120/259 (46%), Gaps = 15/259 (5%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G G+VY GV +AVK + D+ +++F+ E M +++H NLVQL G C R+
Sbjct: 22 GQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREP 80
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
++ ++M G+L L R ++ + ++ + YL ++ +HRD+
Sbjct: 81 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 137
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFG 526
N L+ + K+ DFGL+RL + + APE L + + +DV+AFG
Sbjct: 138 RNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 197
Query: 527 VFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGLFC 586
V + E+A PG ID Q ++L+ D R+E E E V +L C
Sbjct: 198 VLLWEIATYGMSPYPG--------IDPSQVYELLE-KDYRMER--PEGCPEKVYELMRAC 246
Query: 587 SHSNPDTRPSMRQVVQYLD 605
NP RPS ++ Q +
Sbjct: 247 WQWNPSDRPSFAEIHQAFE 265
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 139/281 (49%), Gaps = 30/281 (10%)
Query: 337 SYKNLYKATKGGS-GKVYRGVLPS---SHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKLR 391
SY + + G G+V RG L + + +A+K + ++ ++F+SE MG+
Sbjct: 14 SYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFE 73
Query: 392 HRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYL 451
H N+++L G ++++ ++M NG+LD L N Q +++G+A G+ YL
Sbjct: 74 HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLND-GQFTVIQLVGMLRGIASGMRYL 132
Query: 452 HEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVG---TVGYLA 507
E +HRD+ N+L++++L K+ DFGL+R L ++ +D T+ +G + + A
Sbjct: 133 A---EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTA 189
Query: 508 PELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKG--DVLDASD 564
PE + + T+++D +++G+ M EV + G RP YW DV++A +
Sbjct: 190 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERP--------------YWDMSNQDVINAIE 235
Query: 565 PRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
+ + +L L C + + RP QVV LD
Sbjct: 236 QDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALD 276
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 117/241 (48%), Gaps = 29/241 (12%)
Query: 373 SDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSL 432
+D + F+SE MG+ H N++ L G + ++++ +YM NGSLD L N
Sbjct: 49 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKND-GRF 107
Query: 433 NWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGN 492
Q +++G+ G+ YL + +HRD+ N+L++++L K+ DFG++R+ +
Sbjct: 108 TVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDP 164
Query: 493 DLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDW 549
+ T G + + APE + + T+++DV+++G+ M EV + G RP
Sbjct: 165 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP----------- 213
Query: 550 VIDYWQKG--DVLDASDPRLEGIYVEEQMEIVL---KLGLFCSHSNPDTRPSMRQVVQYL 604
YW DV+ A + EG + M+ + +L L C RP Q+V L
Sbjct: 214 ---YWDMSNQDVIKAIE---EGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 267
Query: 605 D 605
D
Sbjct: 268 D 268
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 117/241 (48%), Gaps = 29/241 (12%)
Query: 373 SDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSL 432
+D + F+SE MG+ H N++ L G + ++++ +YM NGSLD L N
Sbjct: 55 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKND-GRF 113
Query: 433 NWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGN 492
Q +++G+ G+ YL + +HRD+ N+L++++L K+ DFG++R+ +
Sbjct: 114 TVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDP 170
Query: 493 DLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDW 549
+ T G + + APE + + T+++DV+++G+ M EV + G RP
Sbjct: 171 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP----------- 219
Query: 550 VIDYWQKG--DVLDASDPRLEGIYVEEQMEIVL---KLGLFCSHSNPDTRPSMRQVVQYL 604
YW DV+ A + EG + M+ + +L L C RP Q+V L
Sbjct: 220 ---YWDMSNQDVIKAIE---EGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 273
Query: 605 D 605
D
Sbjct: 274 D 274
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 118/235 (50%), Gaps = 25/235 (10%)
Query: 378 KQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQR 437
+ F+SE MG+ H N++ L G + ++++ ++M NGSLD L N Q
Sbjct: 53 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQND-GQFTVIQL 111
Query: 438 FRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHT 496
+++G+A G+ YL + +HR + N+L++++L K+ DFGL+R L D +D
Sbjct: 112 VGMLRGIAAGMKYLA---DMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 168
Query: 497 TNVVG---TVGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVID 552
T+ +G + + APE ++ + T+++DV+++G+ M EV + G RP
Sbjct: 169 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP-------------- 214
Query: 553 YWQ--KGDVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
YW DV++A + + + +L L C + + RP Q+V LD
Sbjct: 215 YWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 269
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 116/236 (49%), Gaps = 29/236 (12%)
Query: 378 KQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQR 437
+ F+ E MG+ H N+V L G R +++V ++M NG+LD L + Q
Sbjct: 89 RDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHD-GQFTVIQL 147
Query: 438 FRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTT 497
+++G+A G+ YL + +HRD+ N+L++++L K+ DFGL+R+ + + T
Sbjct: 148 VGMLRGIAAGMRYLA---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYT 204
Query: 498 NVVGT--VGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYW 554
G V + APE ++ + T+++DV+++G+ M EV + G RP YW
Sbjct: 205 TTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP--------------YW 250
Query: 555 QKG--DVLDASDPRLEGIYVEEQMEI---VLKLGLFCSHSNPDTRPSMRQVVQYLD 605
DV+ A + EG + M+ + +L L C RP Q+V LD
Sbjct: 251 DMSNQDVIKAIE---EGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILD 303
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 119/258 (46%), Gaps = 19/258 (7%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G G+VY GV +AVK + D+ +++F+ E M +++H NLVQL G C +
Sbjct: 43 GQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTLEP 101
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
+V +YMP G+L L R + + ++ + YL ++ +HRD+
Sbjct: 102 PFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 158
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYA 524
N L+ + K+ DFGL+RL D +T + + + APE L + +DV+A
Sbjct: 159 RNCLVGENHVVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWA 216
Query: 525 FGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGL 584
FGV + E+A PG +DL V D +KG ++ + +Y +L
Sbjct: 217 FGVLLWEIATYGMSPYPG-IDLSQ-VYDLLEKGYRMEQPEGCPPKVY---------ELMR 265
Query: 585 FCSHSNPDTRPSMRQVVQ 602
C +P RPS + Q
Sbjct: 266 ACWKWSPADRPSFAETHQ 283
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 119/247 (48%), Gaps = 27/247 (10%)
Query: 363 EIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY-CRRKGELLLVYDYMPNGSLD 421
++AVK C +D + F++E M +LRH NLVQL G KG L +V +YM GSL
Sbjct: 218 KVAVK--CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 275
Query: 422 KILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGD 481
L S R L + V + YL +HRD+ NVL+ D K+ D
Sbjct: 276 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSD 332
Query: 482 FGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRP 538
FGL + + +T G V + APE LR + +T +DV++FG+ + E+ + GR P
Sbjct: 333 FGLTK------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386
Query: 539 VQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMR 598
+ L D V+ +KG +DA D +Y V+K C H + TRP+
Sbjct: 387 YP--RIPLKD-VVPRVEKGYKMDAPDGCPPAVY------DVMK---NCWHLDAATRPTFL 434
Query: 599 QVVQYLD 605
Q+ + L+
Sbjct: 435 QLREQLE 441
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 129/271 (47%), Gaps = 20/271 (7%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R + K + + G +G+V+ G + H ++AVK + S F++E M +L+H+
Sbjct: 12 RETLKLVERLGAGQAGEVWMGYY-NGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQR 69
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L ++ + ++ +YM NGSL L + + L + + +A G+ ++ E
Sbjct: 70 LVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+ +HRD++ AN+L+ L K+ DFGLARL + + + APE + G
Sbjct: 128 --RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYG 185
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
T +DV++FG+ + E+ R PG + VI ++G + D E +Y
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERGYRMVRPDNCPEELY--- 240
Query: 575 QMEIVLKLGLFCSHSNPDTRPS---MRQVVQ 602
+L C P+ RP+ +R V++
Sbjct: 241 ------QLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 118/247 (47%), Gaps = 27/247 (10%)
Query: 363 EIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY-CRRKGELLLVYDYMPNGSLD 421
++AVK C +D + F++E M +LRH NLVQL G KG L +V +YM GSL
Sbjct: 31 KVAVK--CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 88
Query: 422 KILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGD 481
L S R L + V + YL +HRD+ NVL+ D K+ D
Sbjct: 89 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSD 145
Query: 482 FGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRP 538
FGL + + +T G V + APE LR + +T +DV++FG+ + E+ + GR P
Sbjct: 146 FGLTK------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
Query: 539 VQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMR 598
+ L D V+ +KG +DA D +Y E M+ C H + RPS
Sbjct: 200 YP--RIPLKD-VVPRVEKGYKMDAPDGCPPAVY--EVMK-------NCWHLDAAMRPSFL 247
Query: 599 QVVQYLD 605
Q+ + L+
Sbjct: 248 QLREQLE 254
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 118/247 (47%), Gaps = 27/247 (10%)
Query: 363 EIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY-CRRKGELLLVYDYMPNGSLD 421
++AVK C +D + F++E M +LRH NLVQL G KG L +V +YM GSL
Sbjct: 46 KVAVK--CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 103
Query: 422 KILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGD 481
L S R L + V + YL +HRD+ NVL+ D K+ D
Sbjct: 104 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSD 160
Query: 482 FGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRP 538
FGL + + +T G V + APE LR + +T +DV++FG+ + E+ + GR P
Sbjct: 161 FGLTK------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
Query: 539 VQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMR 598
+ L D V+ +KG +DA D +Y E M+ C H + RPS
Sbjct: 215 YP--RIPLKD-VVPRVEKGYKMDAPDGCPPAVY--EVMK-------NCWHLDAAMRPSFL 262
Query: 599 QVVQYLD 605
Q+ + L+
Sbjct: 263 QLREQLE 269
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 117/247 (47%), Gaps = 27/247 (10%)
Query: 363 EIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY-CRRKGELLLVYDYMPNGSLD 421
++AVK C +D + F++E M +LRH NLVQL G KG L +V +YM GSL
Sbjct: 37 KVAVK--CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 94
Query: 422 KILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGD 481
L S R L + V + YL +HRD+ NVL+ D K+ D
Sbjct: 95 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSD 151
Query: 482 FGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRP 538
FGL + + +T G V + APE LR +T +DV++FG+ + E+ + GR P
Sbjct: 152 FGLTK------EASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVP 205
Query: 539 VQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMR 598
+ L D V+ +KG +DA D +Y E M+ C H + RPS
Sbjct: 206 YP--RIPLKD-VVPRVEKGYKMDAPDGCPPAVY--EVMK-------NCWHLDAAMRPSFL 253
Query: 599 QVVQYLD 605
Q+ + L+
Sbjct: 254 QLREQLE 260
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 128/271 (47%), Gaps = 20/271 (7%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R + K + + G G+V+ G + H ++AVK + S F++E M +L+H+
Sbjct: 21 RETLKLVERLGAGQFGEVWMGYY-NGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQR 78
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L ++ + ++ +YM NGSL L + + L + + +A G+ ++ E
Sbjct: 79 LVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 136
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+ +HRD++ AN+L+ L K+ DFGLARL + + + APE + G
Sbjct: 137 --RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG 194
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
T +DV++FG+ + E+ R PG + VI ++G + D E +Y
Sbjct: 195 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERGYRMVRPDNCPEELY--- 249
Query: 575 QMEIVLKLGLFCSHSNPDTRPS---MRQVVQ 602
+L C P+ RP+ +R V++
Sbjct: 250 ------QLMRLCWKERPEDRPTFDYLRSVLE 274
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 128/271 (47%), Gaps = 20/271 (7%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R + K + + G G+V+ G + H ++AVK + S F++E M +L+H+
Sbjct: 12 RETLKLVERLGAGQFGEVWMGYY-NGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQR 69
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L ++ + ++ +YM NGSL L + + L + + +A G+ ++ E
Sbjct: 70 LVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+ +HRD++ AN+L+ L K+ DFGLARL + + + APE + G
Sbjct: 128 --RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG 185
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
T +DV++FG+ + E+ R PG + VI ++G + D E +Y
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERGYRMVRPDNCPEELY--- 240
Query: 575 QMEIVLKLGLFCSHSNPDTRPS---MRQVVQ 602
+L C P+ RP+ +R V++
Sbjct: 241 ------QLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 123/262 (46%), Gaps = 17/262 (6%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R + K + + G G+V+ G + H ++AVK + S F++E M +L+H+
Sbjct: 20 RETLKLVERLGAGQFGEVWMGYY-NGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQR 77
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L ++ + ++ +YM NGSL L + + L + + +A G+ ++ E
Sbjct: 78 LVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 135
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+ +HRD++ AN+L+ L K+ DFGLARL + + + APE + G
Sbjct: 136 --RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG 193
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
T +DV++FG+ + E+ R PG + VI ++G + D E +Y
Sbjct: 194 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERGYRMVRPDNCPEELY--- 248
Query: 575 QMEIVLKLGLFCSHSNPDTRPS 596
+L C P+ RP+
Sbjct: 249 ------QLMRLCWKERPEDRPT 264
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 123/262 (46%), Gaps = 17/262 (6%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R + K + + G G+V+ G + H ++AVK + S F++E M +L+H+
Sbjct: 18 RETLKLVERLGAGQFGEVWMGYY-NGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQR 75
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L ++ + ++ +YM NGSL L + + L + + +A G+ ++ E
Sbjct: 76 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 133
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+ +HRD++ AN+L+ L K+ DFGLARL + + + APE + G
Sbjct: 134 --RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG 191
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
T +DV++FG+ + E+ R PG + VI ++G + D E +Y
Sbjct: 192 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERGYRMVRPDNCPEELY--- 246
Query: 575 QMEIVLKLGLFCSHSNPDTRPS 596
+L C P+ RP+
Sbjct: 247 ------QLMRLCWKERPEDRPT 262
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 117/271 (43%), Gaps = 17/271 (6%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R S + K +G G+V+ G + +A+K + + F+ E M KLRH
Sbjct: 7 RESLRLEVKLGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 64
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LVQL + + +V +YM GSL L T L Q + +A G+ Y+
Sbjct: 65 LVQLYAVVSEE-PIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER- 122
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+HRD++ AN+L+ +L K+ DFGLARL + + + APE G
Sbjct: 123 --MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYG 180
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
R T +DV++FG+ + E+ R PG ++ +VLD + E
Sbjct: 181 RFTIKSDVWSFGILLTELTTKGRVPYPGMVN-----------REVLDQVERGYRMPCPPE 229
Query: 575 QMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
E + L C P+ RP+ + +L+
Sbjct: 230 CPESLHDLMCQCWRKEPEERPTFEYLQAFLE 260
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 128/271 (47%), Gaps = 20/271 (7%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R + K + + G G+V+ G + H ++AVK + S F++E M +L+H+
Sbjct: 14 RETLKLVERLGAGQFGEVWMGYY-NGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQR 71
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L ++ + ++ +YM NGSL L + + L + + +A G+ ++ E
Sbjct: 72 LVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 129
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+ +HRD++ AN+L+ L K+ DFGLARL + + + APE + G
Sbjct: 130 --RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG 187
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
T +DV++FG+ + E+ R PG + VI ++G + D E +Y
Sbjct: 188 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERGYRMVRPDNCPEELY--- 242
Query: 575 QMEIVLKLGLFCSHSNPDTRPS---MRQVVQ 602
+L C P+ RP+ +R V++
Sbjct: 243 ------QLMRLCWKERPEDRPTFDYLRSVLE 267
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 128/271 (47%), Gaps = 20/271 (7%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R + K + + G G+V+ G + H ++AVK + S F++E M +L+H+
Sbjct: 12 RETLKLVERLGAGQFGEVWMGYY-NGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQR 69
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L ++ + ++ +YM NGSL L + + L + + +A G+ ++ E
Sbjct: 70 LVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+ +HRD++ AN+L+ L K+ DFGLARL + + + APE + G
Sbjct: 128 --RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG 185
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
T +DV++FG+ + E+ R PG + VI ++G + D E +Y
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERGYRMVRPDNCPEELY--- 240
Query: 575 QMEIVLKLGLFCSHSNPDTRPS---MRQVVQ 602
+L C P+ RP+ +R V++
Sbjct: 241 ------QLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 128/271 (47%), Gaps = 20/271 (7%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R + K + + G G+V+ G + H ++AVK + S F++E M +L+H+
Sbjct: 13 RETLKLVERLGAGQFGEVWMGYY-NGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQR 70
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L ++ + ++ +YM NGSL L + + L + + +A G+ ++ E
Sbjct: 71 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 128
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+ +HRD++ AN+L+ L K+ DFGLARL + + + APE + G
Sbjct: 129 --RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG 186
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
T +DV++FG+ + E+ R PG + VI ++G + D E +Y
Sbjct: 187 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERGYRMVRPDNCPEELY--- 241
Query: 575 QMEIVLKLGLFCSHSNPDTRPS---MRQVVQ 602
+L C P+ RP+ +R V++
Sbjct: 242 ------QLMRLCWKERPEDRPTFDYLRSVLE 266
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 111/212 (52%), Gaps = 15/212 (7%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKV-CHDSDHGM-KQFVSEIVSMGKLRHRN 394
Y+ L K +G G V++ +H +A+K+V D D G+ + EI + +L+H+N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYS---NTRPSLNWFQRFRIIKGVAFGLLYL 451
+V+L +L LV+++ + L K S + P + F+++KG+ F
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC---- 117
Query: 452 HEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL 511
+ VLHRD+KP N+L++ + E KL DFGLAR + ++ VV T+ Y P++L
Sbjct: 118 ---HSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVL 173
Query: 512 RNGR-GTTSTDVYAFGVFMLEVACGRRPVQPG 542
+ +TS D+++ G E+A RP+ PG
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAARPLFPG 205
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 117/271 (43%), Gaps = 17/271 (6%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R S + K +G G+V+ G + +A+K + + F+ E M KLRH
Sbjct: 266 RESLRLEVKLGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 323
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LVQL + + +V +YM GSL L T L Q + +A G+ Y+
Sbjct: 324 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER- 381
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+HRD++ AN+L+ +L K+ DFGLARL + + + APE G
Sbjct: 382 --MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 439
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
R T +DV++FG+ + E+ R PG ++ +VLD + E
Sbjct: 440 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----------EVLDQVERGYRMPCPPE 488
Query: 575 QMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
E + L C P+ RP+ + +L+
Sbjct: 489 CPESLHDLMCQCWRKEPEERPTFEYLQAFLE 519
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 136/300 (45%), Gaps = 37/300 (12%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVS--EIVSMGKLRHRN 394
Y+NL +G G V + + +A+KK D M + ++ EI + +LRH N
Sbjct: 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHEN 85
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQR--FRIIKGVAFGLLYLH 452
LV L C++K LV++++ + LD + Q+ F+II G+ F + H
Sbjct: 86 LVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGF--CHSH 143
Query: 453 EEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLR 512
++HRDIKP N+L+ KL DFG AR +++ V T Y APELL
Sbjct: 144 N-----IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE-VATRWYRAPELLV 197
Query: 513 -NGRGTTSTDVYAFGVFMLEVACGRRPVQPGELD------LLDWVIDYWQKGDVLDASDP 565
+ + + DV+A G + E+ G P+ PG+ D ++ + + + L +P
Sbjct: 198 GDVKYGKAVDVWAIGCLVTEMFMG-EPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNP 256
Query: 566 RLEGIYVEEQM-------------EIVLKLGLFCSHSNPDTRPSMRQVVQY----LDGGA 608
G+ + E E+V+ L C H +PD RP +++ + +DG A
Sbjct: 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFA 316
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 116/230 (50%), Gaps = 28/230 (12%)
Query: 379 QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF 438
Q + E+ + + +V G GE+ + ++M GSLD++L R +
Sbjct: 69 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKV 128
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTT 497
I V GL YL E+ + ++HRD+KP+N+L+++ E KL DFG++ +L D
Sbjct: 129 SI--AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 180
Query: 498 NVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGE-----LDLLDWVID 552
+ VGT Y++PE L+ + +D+++ G+ ++E+A GR P+ G +LLD+++
Sbjct: 181 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIV- 239
Query: 553 YWQKGDVLDASDPRL-EGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVV 601
+ P+L G++ E + V K C NP R ++Q++
Sbjct: 240 --------NEPPPKLPSGVFSLEFQDFVNK----CLIKNPAERADLKQLM 277
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 128/271 (47%), Gaps = 20/271 (7%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R + K + + G G+V+ G + H ++AVK + S F++E M +L+H+
Sbjct: 17 RETLKLVERLGAGQFGEVWMGYY-NGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQR 74
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L ++ + ++ +YM NGSL L + + L + + +A G+ ++ E
Sbjct: 75 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 132
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+ +HRD++ AN+L+ L K+ DFGLARL + + + APE + G
Sbjct: 133 --RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 190
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
T +DV++FG+ + E+ R PG + VI ++G + D E +Y
Sbjct: 191 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERGYRMVRPDNCPEELY--- 245
Query: 575 QMEIVLKLGLFCSHSNPDTRPS---MRQVVQ 602
+L C P+ RP+ +R V++
Sbjct: 246 ------QLMRLCWKERPEDRPTFDYLRSVLE 270
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 123/262 (46%), Gaps = 17/262 (6%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R + K + + G G+V+ G + H ++AVK + S F++E M +L+H+
Sbjct: 22 RETLKLVERLGAGQFGEVWMGYY-NGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQR 79
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L ++ + ++ +YM NGSL L + + L + + +A G+ ++ E
Sbjct: 80 LVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 137
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+ +HRD++ AN+L+ L K+ DFGLARL + + + APE + G
Sbjct: 138 --RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 195
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
T +DV++FG+ + E+ R PG + VI ++G + D E +Y
Sbjct: 196 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERGYRMVRPDNCPEELY--- 250
Query: 575 QMEIVLKLGLFCSHSNPDTRPS 596
+L C P+ RP+
Sbjct: 251 ------QLMRLCWKERPEDRPT 266
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 128/271 (47%), Gaps = 20/271 (7%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R + K + + G G+V+ G + H ++AVK + S F++E M +L+H+
Sbjct: 18 RETLKLVERLGAGQFGEVWMGYY-NGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQR 75
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L ++ + ++ +YM NGSL L + + L + + +A G+ ++ E
Sbjct: 76 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 133
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+ +HRD++ AN+L+ L K+ DFGLARL + + + APE + G
Sbjct: 134 --RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 191
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
T +DV++FG+ + E+ R PG + VI ++G + D E +Y
Sbjct: 192 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERGYRMVRPDNCPEELY--- 246
Query: 575 QMEIVLKLGLFCSHSNPDTRPS---MRQVVQ 602
+L C P+ RP+ +R V++
Sbjct: 247 ------QLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 114/263 (43%), Gaps = 17/263 (6%)
Query: 343 KATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
K +G G+V+ G + +A+K + + F+ E M KLRH LVQL
Sbjct: 191 KLGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHR 462
+ + +V +YM GSL L T L Q + +A G+ Y+ +HR
Sbjct: 249 SEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 304
Query: 463 DIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDV 522
D++ AN+L+ +L K+ DFGLARL + + + APE GR T +DV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 523 YAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKL 582
++FG+ + E+ R PG ++ +VLD + E E + L
Sbjct: 365 WSFGILLTELTTKGRVPYPGMVN-----------REVLDQVERGYRMPCPPECPESLHDL 413
Query: 583 GLFCSHSNPDTRPSMRQVVQYLD 605
C P+ RP+ + +L+
Sbjct: 414 MCQCWRKEPEERPTFEYLQAFLE 436
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 114/263 (43%), Gaps = 17/263 (6%)
Query: 343 KATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
K +G G+V+ G + +A+K + + F+ E M KLRH LVQL
Sbjct: 191 KLGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHR 462
+ + +V +YM GSL L T L Q + +A G+ Y+ +HR
Sbjct: 249 SEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 304
Query: 463 DIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDV 522
D++ AN+L+ +L K+ DFGLARL + + + APE GR T +DV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 523 YAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKL 582
++FG+ + E+ R PG ++ +VLD + E E + L
Sbjct: 365 WSFGILLTELTTKGRVPYPGMVN-----------REVLDQVERGYRMPCPPECPESLHDL 413
Query: 583 GLFCSHSNPDTRPSMRQVVQYLD 605
C P+ RP+ + +L+
Sbjct: 414 MCQCWRKEPEERPTFEYLQAFLE 436
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 117/271 (43%), Gaps = 17/271 (6%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R S + K +G G+V+ G + +A+K + + F+ E M KLRH
Sbjct: 10 RESLRLEVKLGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 67
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LVQL + + +V +YM GSL L T L Q + +A G+ Y+
Sbjct: 68 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER- 125
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+HRD++ AN+L+ +L K+ DFGLARL + + + APE G
Sbjct: 126 --MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 183
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
R T +DV++FG+ + E+ R PG ++ +VLD + E
Sbjct: 184 RFTIKSDVWSFGILLTELTTKGRVPYPGMVN-----------REVLDQVERGYRMPCPPE 232
Query: 575 QMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
E + L C P+ RP+ + +L+
Sbjct: 233 CPESLHDLMCQCWRKEPEERPTFEYLQAFLE 263
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 128/271 (47%), Gaps = 20/271 (7%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R + K + + G G+V+ G + H ++AVK + S F++E M +L+H+
Sbjct: 7 RETLKLVERLGAGQFGEVWMGYY-NGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQR 64
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L ++ + ++ +YM NGSL L + + L + + +A G+ ++ E
Sbjct: 65 LVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 122
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+ +HRD++ AN+L+ L K+ DFGLARL + + + APE + G
Sbjct: 123 --RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 180
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
T +DV++FG+ + E+ R PG + VI ++G + D E +Y
Sbjct: 181 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERGYRMVRPDNCPEELY--- 235
Query: 575 QMEIVLKLGLFCSHSNPDTRPS---MRQVVQ 602
+L C P+ RP+ +R V++
Sbjct: 236 ------QLMRLCWKERPEDRPTFDYLRSVLE 260
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 128/271 (47%), Gaps = 20/271 (7%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R + K + + G G+V+ G + H ++AVK + S F++E M +L+H+
Sbjct: 12 RETLKLVERLGAGQFGEVWMGYY-NGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQR 69
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L ++ + ++ +YM NGSL L + + L + + +A G+ ++ E
Sbjct: 70 LVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+ +HRD++ AN+L+ L K+ DFGLARL + + + APE + G
Sbjct: 128 --RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 185
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
T +DV++FG+ + E+ R PG + VI ++G + D E +Y
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERGYRMVRPDNCPEELY--- 240
Query: 575 QMEIVLKLGLFCSHSNPDTRPS---MRQVVQ 602
+L C P+ RP+ +R V++
Sbjct: 241 ------QLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 117/236 (49%), Gaps = 34/236 (14%)
Query: 379 QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF 438
Q + E+ + + +V G GE+ + ++M GSLD++L R +
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKV 109
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTT 497
I V GL YL E+ + ++HRD+KP+N+L+++ E KL DFG++ +L D
Sbjct: 110 SI--AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 161
Query: 498 NVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGE-----------LDL 546
+ VGT Y++PE L+ + +D+++ G+ ++E+A GR P+ P + +L
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFEL 221
Query: 547 LDWVIDYWQKGDVLDASDPRL-EGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVV 601
LD+++ + P+L G++ E + V K C NP R ++Q++
Sbjct: 222 LDYIV---------NEPPPKLPSGVFSLEFQDFVNK----CLIKNPAERADLKQLM 264
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 119/252 (47%), Gaps = 36/252 (14%)
Query: 363 EIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDK 422
++A+K++ +S+ K F+ E+ + ++ H N+V+L G C + LV +Y GSL
Sbjct: 33 DVAIKQI--ESESERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYN 88
Query: 423 IL-------YSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDAD- 474
+L Y +++W + +GVA YLH + ++HRD+KP N+LL A
Sbjct: 89 VLHGAEPLPYYTAAHAMSWC--LQCSQGVA----YLHSMQPKALIHRDLKPPNLLLVAGG 142
Query: 475 LEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVAC 534
K+ DFG A H TN G+ ++APE+ + DV+++G+ + EV
Sbjct: 143 TVLKICDFGTA----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT 198
Query: 535 GRRPVQP--GELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPD 592
R+P G + W + + + P L ++ + + L C +P
Sbjct: 199 RRKPFDEIGGPAFRIMWAVH--------NGTRPPL----IKNLPKPIESLMTRCWSKDPS 246
Query: 593 TRPSMRQVVQYL 604
RPSM ++V+ +
Sbjct: 247 QRPSMEEIVKIM 258
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 119/252 (47%), Gaps = 36/252 (14%)
Query: 363 EIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDK 422
++A+K++ +S+ K F+ E+ + ++ H N+V+L G C + LV +Y GSL
Sbjct: 34 DVAIKQI--ESESERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYN 89
Query: 423 IL-------YSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDAD- 474
+L Y +++W + +GVA YLH + ++HRD+KP N+LL A
Sbjct: 90 VLHGAEPLPYYTAAHAMSWC--LQCSQGVA----YLHSMQPKALIHRDLKPPNLLLVAGG 143
Query: 475 LEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVAC 534
K+ DFG A H TN G+ ++APE+ + DV+++G+ + EV
Sbjct: 144 TVLKICDFGTA----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT 199
Query: 535 GRRPVQP--GELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPD 592
R+P G + W + + + P L ++ + + L C +P
Sbjct: 200 RRKPFDEIGGPAFRIMWAVH--------NGTRPPL----IKNLPKPIESLMTRCWSKDPS 247
Query: 593 TRPSMRQVVQYL 604
RPSM ++V+ +
Sbjct: 248 QRPSMEEIVKIM 259
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 114/263 (43%), Gaps = 17/263 (6%)
Query: 343 KATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
K +G G+V+ G + +A+K + + F+ E M KLRH LVQL
Sbjct: 191 KLGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHR 462
+ + +V +YM GSL L T L Q + +A G+ Y+ +HR
Sbjct: 249 SEE-PIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 304
Query: 463 DIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDV 522
D++ AN+L+ +L K+ DFGLARL + + + APE GR T +DV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 523 YAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKL 582
++FG+ + E+ R PG ++ +VLD + E E + L
Sbjct: 365 WSFGILLTELTTKGRVPYPGMVNR-----------EVLDQVERGYRMPCPPECPESLHDL 413
Query: 583 GLFCSHSNPDTRPSMRQVVQYLD 605
C P+ RP+ + +L+
Sbjct: 414 MCQCWRKEPEERPTFEYLQAFLE 436
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 97/184 (52%), Gaps = 9/184 (4%)
Query: 379 QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF 438
Q + E+ + + +V G GE+ + ++M GSLD++L R +
Sbjct: 112 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKV 171
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTT 497
I V GL YL E+ + ++HRD+KP+N+L+++ E KL DFG++ +L D
Sbjct: 172 SI--AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 223
Query: 498 NVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKG 557
+ VGT Y++PE L+ + +D+++ G+ ++E+A GR P+ P + L+ + +G
Sbjct: 224 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 283
Query: 558 DVLD 561
D +
Sbjct: 284 DAAE 287
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 132/270 (48%), Gaps = 25/270 (9%)
Query: 346 KGGSGKVYRGVLPSSHAE---IAVKKVCHDSDHG-MKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G VY G L + + AVK + +D G + QF++E + M H N++ L G
Sbjct: 99 RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI 158
Query: 402 C-RRKGELLLVYDYMPNGSLDKILYSNTR-PSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
C R +G L+V YM +G L + + T P++ F + VA G+ +L +
Sbjct: 159 CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFLAS---KKF 213
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGND-LHT-TNVVGTVGYLAPELLRNGRG 516
+HRD+ N +LD K+ DFGLAR +YD D +H T V ++A E L+ +
Sbjct: 214 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 273
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQM 576
TT +DV++FGV + E+ P P +++ D + Y +G L + + +Y
Sbjct: 274 TTKSDVWSFGVLLWELMTRGAPPYP-DVNTFDITV-YLLQGRRLLQPEYCPDPLY----- 326
Query: 577 EIVLKLGLFCSHSNPDTRPSMRQVVQYLDG 606
E++LK C H + RPS ++V +
Sbjct: 327 EVMLK----CWHPKAEMRPSFSELVSRISA 352
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 117/271 (43%), Gaps = 17/271 (6%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R S + K +G G+V+ G + +A+K + + F+ E M KLRH
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 74
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LVQL + + +V +YM GSL L L Q + +A G+ Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER- 132
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+HRD++ AN+L+ +L K+ DFGLARL + + + APE G
Sbjct: 133 --MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYG 190
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
R T +DV++FG+ + E+ R PG ++ +VLD + E
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPYPGMVN-----------REVLDQVERGYRMPCPPE 239
Query: 575 QMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
E + L C +P+ RP+ + +L+
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 117/271 (43%), Gaps = 17/271 (6%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R S + K +G G+V+ G + +A+K + + F+ E M KLRH
Sbjct: 14 RESLRLEVKLGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 71
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LVQL + + +V +YM GSL L T L Q + +A G+ Y+
Sbjct: 72 LVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER- 129
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+HRD++ AN+L+ +L K+ DFGLARL + + + APE G
Sbjct: 130 --MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYG 187
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
R T +DV++FG+ + E+ R PG ++ +VLD + E
Sbjct: 188 RFTIKSDVWSFGILLTELTTKGRVPYPGMVN-----------REVLDQVERGYRMPCPPE 236
Query: 575 QMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
E + L C P+ RP+ + +L+
Sbjct: 237 CPESLHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 114/226 (50%), Gaps = 24/226 (10%)
Query: 379 QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF 438
Q + E+ + + +V G GE+ + ++M GSLD++L R +
Sbjct: 53 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKV 112
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTT 497
I V GL YL E+ + ++HRD+KP+N+L+++ E KL DFG++ +L D
Sbjct: 113 SI--AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE----MAN 164
Query: 498 NVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGEL-DLLDWVIDYWQK 556
VGT Y++PE L+ + +D+++ G+ ++E+A GR P P + +LLD+++
Sbjct: 165 EFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIV----- 219
Query: 557 GDVLDASDPRL-EGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVV 601
+ P+L ++ E + V K C NP R ++Q++
Sbjct: 220 ----NEPPPKLPSAVFSLEFQDFVNK----CLIKNPAERADLKQLM 257
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 132/270 (48%), Gaps = 25/270 (9%)
Query: 346 KGGSGKVYRGVLPSSHAE---IAVKKVCHDSDHG-MKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G VY G L + + AVK + +D G + QF++E + M H N++ L G
Sbjct: 38 RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI 97
Query: 402 C-RRKGELLLVYDYMPNGSLDKILYSNTR-PSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
C R +G L+V YM +G L + + T P++ F + VA G+ +L +
Sbjct: 98 CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFLAS---KKF 152
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGND-LHT-TNVVGTVGYLAPELLRNGRG 516
+HRD+ N +LD K+ DFGLAR +YD D +H T V ++A E L+ +
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 212
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQM 576
TT +DV++FGV + E+ P P +++ D + Y +G L + + +Y
Sbjct: 213 TTKSDVWSFGVLLWELMTRGAPPYP-DVNTFDITV-YLLQGRRLLQPEYCPDPLY----- 265
Query: 577 EIVLKLGLFCSHSNPDTRPSMRQVVQYLDG 606
E++LK C H + RPS ++V +
Sbjct: 266 EVMLK----CWHPKAEMRPSFSELVSRISA 291
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 132/270 (48%), Gaps = 25/270 (9%)
Query: 346 KGGSGKVYRGVLPSSHAE---IAVKKVCHDSDHG-MKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G VY G L + + AVK + +D G + QF++E + M H N++ L G
Sbjct: 40 RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI 99
Query: 402 C-RRKGELLLVYDYMPNGSLDKILYSNTR-PSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
C R +G L+V YM +G L + + T P++ F + VA G+ +L +
Sbjct: 100 CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFLAS---KKF 154
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGND-LHT-TNVVGTVGYLAPELLRNGRG 516
+HRD+ N +LD K+ DFGLAR +YD D +H T V ++A E L+ +
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQM 576
TT +DV++FGV + E+ P P +++ D + Y +G L + + +Y
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAPPYP-DVNTFDITV-YLLQGRRLLQPEYCPDPLY----- 267
Query: 577 EIVLKLGLFCSHSNPDTRPSMRQVVQYLDG 606
E++LK C H + RPS ++V +
Sbjct: 268 EVMLK----CWHPKAEMRPSFSELVSRISA 293
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 131/270 (48%), Gaps = 25/270 (9%)
Query: 346 KGGSGKVYRGVLPSSHAE---IAVKKVCHDSDHG-MKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G VY G L + + AVK + +D G + QF++E + M H N++ L G
Sbjct: 39 RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI 98
Query: 402 C-RRKGELLLVYDYMPNGSLDKILYSNTR-PSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
C R +G L+V YM +G L + + T P++ F + VA G+ YL +
Sbjct: 99 CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLAS---KKF 153
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLAR-LYD-HGNDLHT-TNVVGTVGYLAPELLRNGRG 516
+HRD+ N +LD K+ DFGLAR +YD +H T V ++A E L+ +
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKF 213
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQM 576
TT +DV++FGV + E+ P P +++ D + Y +G L + + +Y
Sbjct: 214 TTKSDVWSFGVLLWELMTRGAPPYP-DVNTFDITV-YLLQGRRLLQPEYCPDPLY----- 266
Query: 577 EIVLKLGLFCSHSNPDTRPSMRQVVQYLDG 606
E++LK C H + RPS ++V +
Sbjct: 267 EVMLK----CWHPKAEMRPSFSELVSRISA 292
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 132/270 (48%), Gaps = 25/270 (9%)
Query: 346 KGGSGKVYRGVLPSSHAE---IAVKKVCHDSDHG-MKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G VY G L + + AVK + +D G + QF++E + M H N++ L G
Sbjct: 41 RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI 100
Query: 402 C-RRKGELLLVYDYMPNGSLDKILYSNTR-PSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
C R +G L+V YM +G L + + T P++ F + VA G+ +L +
Sbjct: 101 CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFLAS---KKF 155
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGND-LHT-TNVVGTVGYLAPELLRNGRG 516
+HRD+ N +LD K+ DFGLAR +YD D +H T V ++A E L+ +
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 215
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQM 576
TT +DV++FGV + E+ P P +++ D + Y +G L + + +Y
Sbjct: 216 TTKSDVWSFGVLLWELMTRGAPPYP-DVNTFDITV-YLLQGRRLLQPEYCPDPLY----- 268
Query: 577 EIVLKLGLFCSHSNPDTRPSMRQVVQYLDG 606
E++LK C H + RPS ++V +
Sbjct: 269 EVMLK----CWHPKAEMRPSFSELVSRISA 294
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 132/270 (48%), Gaps = 25/270 (9%)
Query: 346 KGGSGKVYRGVLPSSHAE---IAVKKVCHDSDHG-MKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G VY G L + + AVK + +D G + QF++E + M H N++ L G
Sbjct: 40 RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI 99
Query: 402 C-RRKGELLLVYDYMPNGSLDKILYSNTR-PSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
C R +G L+V YM +G L + + T P++ F + VA G+ +L +
Sbjct: 100 CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFLAS---KKF 154
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGND-LHT-TNVVGTVGYLAPELLRNGRG 516
+HRD+ N +LD K+ DFGLAR +YD D +H T V ++A E L+ +
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQM 576
TT +DV++FGV + E+ P P +++ D + Y +G L + + +Y
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAPPYP-DVNTFDITV-YLLQGRRLLQPEYCPDPLY----- 267
Query: 577 EIVLKLGLFCSHSNPDTRPSMRQVVQYLDG 606
E++LK C H + RPS ++V +
Sbjct: 268 EVMLK----CWHPKAEMRPSFSELVSRISA 293
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 117/271 (43%), Gaps = 17/271 (6%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R S + K +G G+V+ G + +A+K + + F+ E M KLRH
Sbjct: 14 RESLRLEVKLGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 71
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LVQL + + +V +YM GSL L T L Q + +A G+ Y+
Sbjct: 72 LVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER- 129
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+HRD++ AN+L+ +L K+ DFGLARL + + + APE G
Sbjct: 130 --MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 187
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
R T +DV++FG+ + E+ R PG ++ +VLD + E
Sbjct: 188 RFTIKSDVWSFGILLTELTTKGRVPYPGMVN-----------REVLDQVERGYRMPCPPE 236
Query: 575 QMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
E + L C P+ RP+ + +L+
Sbjct: 237 CPESLHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 132/270 (48%), Gaps = 25/270 (9%)
Query: 346 KGGSGKVYRGVLPSSHAE---IAVKKVCHDSDHG-MKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G VY G L + + AVK + +D G + QF++E + M H N++ L G
Sbjct: 45 RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI 104
Query: 402 C-RRKGELLLVYDYMPNGSLDKILYSNTR-PSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
C R +G L+V YM +G L + + T P++ F + VA G+ +L +
Sbjct: 105 CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFLAS---KKF 159
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGND-LHT-TNVVGTVGYLAPELLRNGRG 516
+HRD+ N +LD K+ DFGLAR +YD D +H T V ++A E L+ +
Sbjct: 160 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 219
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQM 576
TT +DV++FGV + E+ P P +++ D + Y +G L + + +Y
Sbjct: 220 TTKSDVWSFGVLLWELMTRGAPPYP-DVNTFDITV-YLLQGRRLLQPEYCPDPLY----- 272
Query: 577 EIVLKLGLFCSHSNPDTRPSMRQVVQYLDG 606
E++LK C H + RPS ++V +
Sbjct: 273 EVMLK----CWHPKAEMRPSFSELVSRISA 298
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 347 GGSGKVYRGVLPSSHAEIAVK--KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRR 404
G G VY+G H ++AVK KV + + F +E+ + K RH N++ GY
Sbjct: 47 GSFGTVYKG---KWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT- 102
Query: 405 KGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDI 464
K L +V + SL K L+ FQ I + A G+ YLH + ++HRD+
Sbjct: 103 KDNLAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDM 158
Query: 465 KPANVLLDADLEGKLGDFGLARLYDH-GNDLHTTNVVGTVGYLAPELLR---NGRGTTST 520
K N+ L L K+GDFGLA + G+V ++APE++R N + +
Sbjct: 159 KSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQS 218
Query: 521 DVYAFGVFMLEVACGRRP 538
DVY++G+ + E+ G P
Sbjct: 219 DVYSYGIVLYELMTGELP 236
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 132/270 (48%), Gaps = 25/270 (9%)
Query: 346 KGGSGKVYRGVLPSSHAE---IAVKKVCHDSDHG-MKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G VY G L + + AVK + +D G + QF++E + M H N++ L G
Sbjct: 59 RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI 118
Query: 402 C-RRKGELLLVYDYMPNGSLDKILYSNTR-PSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
C R +G L+V YM +G L + + T P++ F + VA G+ YL +
Sbjct: 119 CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLAS---KKF 173
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLAR-LYD--HGNDLHTTNVVGTVGYLAPELLRNGRG 516
+HRD+ N +LD K+ DFGLAR +YD + + + T V ++A E L+ +
Sbjct: 174 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 233
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQM 576
TT +DV++FGV + E+ P P +++ D + Y +G L + + +Y
Sbjct: 234 TTKSDVWSFGVLLWELMTRGAPPYP-DVNTFDITV-YLLQGRRLLQPEYCPDPLY----- 286
Query: 577 EIVLKLGLFCSHSNPDTRPSMRQVVQYLDG 606
E++LK C H + RPS ++V +
Sbjct: 287 EVMLK----CWHPKAEMRPSFSELVSRISA 312
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 128/271 (47%), Gaps = 20/271 (7%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R + K + + G G+V+ G + H ++AVK + S F++E M +L+H+
Sbjct: 8 RETLKLVERLGAGQFGEVWMGYY-NGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQR 65
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L ++ + ++ +YM NGSL L + + L + + +A G+ ++ E
Sbjct: 66 LVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 123
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+ +HR+++ AN+L+ L K+ DFGLARL + + + APE + G
Sbjct: 124 --RNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 181
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
T +DV++FG+ + E+ R PG + VI ++G + D E +Y
Sbjct: 182 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERGYRMVRPDNCPEELY--- 236
Query: 575 QMEIVLKLGLFCSHSNPDTRPS---MRQVVQ 602
+L C P+ RP+ +R V++
Sbjct: 237 ------QLMRLCWKERPEDRPTFDYLRSVLE 261
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 117/271 (43%), Gaps = 17/271 (6%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R S + K +G G+V+ G + +A+K + + F+ E M KLRH
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 74
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LVQL + + +V +YM GSL L L Q + +A G+ Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER- 132
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+HRD++ AN+L+ +L K+ DFGLARL + + + APE G
Sbjct: 133 --MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
R T +DV++FG+ + E+ R PG ++ +VLD + E
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPYPGMVN-----------REVLDQVERGYRMPCPPE 239
Query: 575 QMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
E + L C +P+ RP+ + +L+
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 117/271 (43%), Gaps = 17/271 (6%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R S + K +G G+V+ G + +A+K + + F+ E M KLRH
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 74
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LVQL + + +V +YM GSL L L Q + +A G+ Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER- 132
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+HRD++ AN+L+ +L K+ DFGLARL + + + APE G
Sbjct: 133 --MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
R T +DV++FG+ + E+ R PG ++ +VLD + E
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPYPGMVN-----------REVLDQVERGYRMPCPPE 239
Query: 575 QMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
E + L C +P+ RP+ + +L+
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 131/265 (49%), Gaps = 25/265 (9%)
Query: 346 KGGSGKVYRGVLPSSHAE---IAVKKVCHDSDHG-MKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G VY G L + + AVK + +D G + QF++E + M H N++ L G
Sbjct: 58 RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI 117
Query: 402 C-RRKGELLLVYDYMPNGSLDKILYSNTR-PSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
C R +G L+V YM +G L + + T P++ F + VA G+ YL +
Sbjct: 118 CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLAS---KKF 172
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLAR-LYD--HGNDLHTTNVVGTVGYLAPELLRNGRG 516
+HRD+ N +LD K+ DFGLAR +YD + + + T V ++A E L+ +
Sbjct: 173 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 232
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQM 576
TT +DV++FGV + E+ P P +++ D + Y +G L + + +Y
Sbjct: 233 TTKSDVWSFGVLLWELMTRGAPPYP-DVNTFDITV-YLLQGRRLLQPEYCPDPLY----- 285
Query: 577 EIVLKLGLFCSHSNPDTRPSMRQVV 601
E++LK C H + RPS ++V
Sbjct: 286 EVMLK----CWHPKAEMRPSFSELV 306
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 97/184 (52%), Gaps = 9/184 (4%)
Query: 379 QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF 438
Q + E+ + + +V G GE+ + ++M GSLD++L R +
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKV 109
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTT 497
I V GL YL E+ + ++HRD+KP+N+L+++ E KL DFG++ +L D
Sbjct: 110 SI--AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 161
Query: 498 NVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKG 557
+ VGT Y++PE L+ + +D+++ G+ ++E+A GR P+ P + L+ + +G
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 221
Query: 558 DVLD 561
D +
Sbjct: 222 DAAE 225
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 131/265 (49%), Gaps = 25/265 (9%)
Query: 346 KGGSGKVYRGVLPSSHAE---IAVKKVCHDSDHG-MKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G VY G L + + AVK + +D G + QF++E + M H N++ L G
Sbjct: 38 RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI 97
Query: 402 C-RRKGELLLVYDYMPNGSLDKILYSNTR-PSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
C R +G L+V YM +G L + + T P++ F + VA G+ YL +
Sbjct: 98 CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLAS---KKF 152
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLAR-LYD--HGNDLHTTNVVGTVGYLAPELLRNGRG 516
+HRD+ N +LD K+ DFGLAR +YD + + + T V ++A E L+ +
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 212
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQM 576
TT +DV++FGV + E+ P P +++ D + Y +G L + + +Y
Sbjct: 213 TTKSDVWSFGVLLWELMTRGAPPYP-DVNTFDITV-YLLQGRRLLQPEYCPDPLY----- 265
Query: 577 EIVLKLGLFCSHSNPDTRPSMRQVV 601
E++LK C H + RPS ++V
Sbjct: 266 EVMLK----CWHPKAEMRPSFSELV 286
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 97/184 (52%), Gaps = 9/184 (4%)
Query: 379 QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF 438
Q + E+ + + +V G GE+ + ++M GSLD++L R +
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKV 109
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTT 497
I V GL YL E+ + ++HRD+KP+N+L+++ E KL DFG++ +L D
Sbjct: 110 SI--AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 161
Query: 498 NVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKG 557
+ VGT Y++PE L+ + +D+++ G+ ++E+A GR P+ P + L+ + +G
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 221
Query: 558 DVLD 561
D +
Sbjct: 222 DAAE 225
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 117/271 (43%), Gaps = 17/271 (6%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R S + K +G G+V+ G + +A+K + + F+ E M KLRH
Sbjct: 8 RESLRLEVKLGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 65
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LVQL + + +V +YM GSL L L Q + +A G+ Y+
Sbjct: 66 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER- 123
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+HRD++ AN+L+ +L K+ DFGLARL + + + APE G
Sbjct: 124 --MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 181
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
R T +DV++FG+ + E+ R PG ++ +VLD + E
Sbjct: 182 RFTIKSDVWSFGILLTELTTKGRVPYPGMVN-----------REVLDQVERGYRMPCPPE 230
Query: 575 QMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
E + L C +P+ RP+ + +L+
Sbjct: 231 CPESLHDLMCQCWRKDPEERPTFEYLQAFLE 261
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 117/271 (43%), Gaps = 17/271 (6%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R S + K +G G+V+ G + +A+K + + F+ E M KLRH
Sbjct: 6 RESLRLEVKLGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 63
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LVQL + + +V +YM GSL L L Q + +A G+ Y+
Sbjct: 64 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER- 121
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+HRD++ AN+L+ +L K+ DFGLARL + + + APE G
Sbjct: 122 --MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 179
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
R T +DV++FG+ + E+ R PG ++ +VLD + E
Sbjct: 180 RFTIKSDVWSFGILLTELTTKGRVPYPGMVN-----------REVLDQVERGYRMPCPPE 228
Query: 575 QMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
E + L C +P+ RP+ + +L+
Sbjct: 229 CPESLHDLMCQCWRKDPEERPTFEYLQAFLE 259
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 131/265 (49%), Gaps = 25/265 (9%)
Query: 346 KGGSGKVYRGVLPSSHAE---IAVKKVCHDSDHG-MKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G VY G L + + AVK + +D G + QF++E + M H N++ L G
Sbjct: 32 RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI 91
Query: 402 C-RRKGELLLVYDYMPNGSLDKILYSNTR-PSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
C R +G L+V YM +G L + + T P++ F + VA G+ YL +
Sbjct: 92 CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLAS---KKF 146
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLAR-LYD--HGNDLHTTNVVGTVGYLAPELLRNGRG 516
+HRD+ N +LD K+ DFGLAR +YD + + + T V ++A E L+ +
Sbjct: 147 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 206
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQM 576
TT +DV++FGV + E+ P P +++ D + Y +G L + + +Y
Sbjct: 207 TTKSDVWSFGVLLWELMTRGAPPYP-DVNTFDITV-YLLQGRRLLQPEYCPDPLY----- 259
Query: 577 EIVLKLGLFCSHSNPDTRPSMRQVV 601
E++LK C H + RPS ++V
Sbjct: 260 EVMLK----CWHPKAEMRPSFSELV 280
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 131/265 (49%), Gaps = 25/265 (9%)
Query: 346 KGGSGKVYRGVLPSSHAE---IAVKKVCHDSDHG-MKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G VY G L + + AVK + +D G + QF++E + M H N++ L G
Sbjct: 40 RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI 99
Query: 402 C-RRKGELLLVYDYMPNGSLDKILYSNTR-PSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
C R +G L+V YM +G L + + T P++ F + VA G+ YL +
Sbjct: 100 CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLAS---KKF 154
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLAR-LYD--HGNDLHTTNVVGTVGYLAPELLRNGRG 516
+HRD+ N +LD K+ DFGLAR +YD + + + T V ++A E L+ +
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQM 576
TT +DV++FGV + E+ P P +++ D + Y +G L + + +Y
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAPPYP-DVNTFDITV-YLLQGRRLLQPEYCPDPLY----- 267
Query: 577 EIVLKLGLFCSHSNPDTRPSMRQVV 601
E++LK C H + RPS ++V
Sbjct: 268 EVMLK----CWHPKAEMRPSFSELV 288
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 111/212 (52%), Gaps = 15/212 (7%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKV-CHDSDHGM-KQFVSEIVSMGKLRHRN 394
Y+ L K +G G V++ +H +A+K+V D D G+ + EI + +L+H+N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYS---NTRPSLNWFQRFRIIKGVAFGLLYL 451
+V+L +L LV+++ + L K S + P + F+++KG+ F
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC---- 117
Query: 452 HEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL 511
+ VLHRD+KP N+L++ + E KL +FGLAR + ++ VV T+ Y P++L
Sbjct: 118 ---HSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVL 173
Query: 512 RNGR-GTTSTDVYAFGVFMLEVACGRRPVQPG 542
+ +TS D+++ G E+A RP+ PG
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAGRPLFPG 205
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 117/271 (43%), Gaps = 17/271 (6%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R S + K +G G+V+ G + +A+K + + F+ E M KLRH
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 74
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LVQL + + +V +YM GSL L L Q + +A G+ Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER- 132
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+HRD++ AN+L+ +L K+ DFGLARL + + + APE G
Sbjct: 133 --MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
R T +DV++FG+ + E+ R PG ++ +VLD + E
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPYPGMVN-----------REVLDQVERGYRMPCPPE 239
Query: 575 QMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
E + L C +P+ RP+ + +L+
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 131/265 (49%), Gaps = 25/265 (9%)
Query: 346 KGGSGKVYRGVLPSSHAE---IAVKKVCHDSDHG-MKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G VY G L + + AVK + +D G + QF++E + M H N++ L G
Sbjct: 35 RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI 94
Query: 402 C-RRKGELLLVYDYMPNGSLDKILYSNTR-PSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
C R +G L+V YM +G L + + T P++ F + VA G+ YL +
Sbjct: 95 CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLAS---KKF 149
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLAR-LYD--HGNDLHTTNVVGTVGYLAPELLRNGRG 516
+HRD+ N +LD K+ DFGLAR +YD + + + T V ++A E L+ +
Sbjct: 150 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 209
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQM 576
TT +DV++FGV + E+ P P +++ D + Y +G L + + +Y
Sbjct: 210 TTKSDVWSFGVLLWELMTRGAPPYP-DVNTFDITV-YLLQGRRLLQPEYCPDPLY----- 262
Query: 577 EIVLKLGLFCSHSNPDTRPSMRQVV 601
E++LK C H + RPS ++V
Sbjct: 263 EVMLK----CWHPKAEMRPSFSELV 283
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 131/265 (49%), Gaps = 25/265 (9%)
Query: 346 KGGSGKVYRGVLPSSHAE---IAVKKVCHDSDHG-MKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G VY G L + + AVK + +D G + QF++E + M H N++ L G
Sbjct: 40 RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI 99
Query: 402 C-RRKGELLLVYDYMPNGSLDKILYSNTR-PSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
C R +G L+V YM +G L + + T P++ F + VA G+ YL +
Sbjct: 100 CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLAS---KKF 154
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLAR-LYD--HGNDLHTTNVVGTVGYLAPELLRNGRG 516
+HRD+ N +LD K+ DFGLAR +YD + + + T V ++A E L+ +
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQM 576
TT +DV++FGV + E+ P P +++ D + Y +G L + + +Y
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAPPYP-DVNTFDITV-YLLQGRRLLQPEYCPDPLY----- 267
Query: 577 EIVLKLGLFCSHSNPDTRPSMRQVV 601
E++LK C H + RPS ++V
Sbjct: 268 EVMLK----CWHPKAEMRPSFSELV 288
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 131/265 (49%), Gaps = 25/265 (9%)
Query: 346 KGGSGKVYRGVLPSSHAE---IAVKKVCHDSDHG-MKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G VY G L + + AVK + +D G + QF++E + M H N++ L G
Sbjct: 37 RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI 96
Query: 402 C-RRKGELLLVYDYMPNGSLDKILYSNTR-PSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
C R +G L+V YM +G L + + T P++ F + VA G+ YL +
Sbjct: 97 CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLAS---KKF 151
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLAR-LYD--HGNDLHTTNVVGTVGYLAPELLRNGRG 516
+HRD+ N +LD K+ DFGLAR +YD + + + T V ++A E L+ +
Sbjct: 152 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 211
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQM 576
TT +DV++FGV + E+ P P +++ D + Y +G L + + +Y
Sbjct: 212 TTKSDVWSFGVLLWELMTRGAPPYP-DVNTFDITV-YLLQGRRLLQPEYCPDPLY----- 264
Query: 577 EIVLKLGLFCSHSNPDTRPSMRQVV 601
E++LK C H + RPS ++V
Sbjct: 265 EVMLK----CWHPKAEMRPSFSELV 285
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 131/265 (49%), Gaps = 25/265 (9%)
Query: 346 KGGSGKVYRGVLPSSHAE---IAVKKVCHDSDHG-MKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G VY G L + + AVK + +D G + QF++E + M H N++ L G
Sbjct: 39 RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI 98
Query: 402 C-RRKGELLLVYDYMPNGSLDKILYSNTR-PSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
C R +G L+V YM +G L + + T P++ F + VA G+ YL +
Sbjct: 99 CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLAS---KKF 153
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLAR-LYD--HGNDLHTTNVVGTVGYLAPELLRNGRG 516
+HRD+ N +LD K+ DFGLAR +YD + + + T V ++A E L+ +
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 213
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQM 576
TT +DV++FGV + E+ P P +++ D + Y +G L + + +Y
Sbjct: 214 TTKSDVWSFGVLLWELMTRGAPPYP-DVNTFDITV-YLLQGRRLLQPEYCPDPLY----- 266
Query: 577 EIVLKLGLFCSHSNPDTRPSMRQVV 601
E++LK C H + RPS ++V
Sbjct: 267 EVMLK----CWHPKAEMRPSFSELV 287
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 97/184 (52%), Gaps = 9/184 (4%)
Query: 379 QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF 438
Q + E+ + + +V G GE+ + ++M GSLD++L R +
Sbjct: 77 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKV 136
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTT 497
I V GL YL E+ + ++HRD+KP+N+L+++ E KL DFG++ +L D
Sbjct: 137 SI--AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 188
Query: 498 NVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKG 557
+ VGT Y++PE L+ + +D+++ G+ ++E+A GR P+ P + L+ + +G
Sbjct: 189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 248
Query: 558 DVLD 561
D +
Sbjct: 249 DAAE 252
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 97/184 (52%), Gaps = 9/184 (4%)
Query: 379 QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF 438
Q + E+ + + +V G GE+ + ++M GSLD++L R +
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKV 109
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTT 497
I V GL YL E+ + ++HRD+KP+N+L+++ E KL DFG++ +L D
Sbjct: 110 SI--AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 161
Query: 498 NVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKG 557
+ VGT Y++PE L+ + +D+++ G+ ++E+A GR P+ P + L+ + +G
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 221
Query: 558 DVLD 561
D +
Sbjct: 222 DAAE 225
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 97/184 (52%), Gaps = 9/184 (4%)
Query: 379 QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF 438
Q + E+ + + +V G GE+ + ++M GSLD++L R +
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKV 109
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTT 497
I V GL YL E+ + ++HRD+KP+N+L+++ E KL DFG++ +L D
Sbjct: 110 SI--AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 161
Query: 498 NVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKG 557
+ VGT Y++PE L+ + +D+++ G+ ++E+A GR P+ P + L+ + +G
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 221
Query: 558 DVLD 561
D +
Sbjct: 222 DAAE 225
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 114/263 (43%), Gaps = 17/263 (6%)
Query: 343 KATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
K +G G+V+ G + +A+K + + + F+ E M KLRH LVQL
Sbjct: 192 KLGQGCFGEVWMGTW-NGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVV 249
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHR 462
+ + +V +YM GSL L L Q + +A G+ Y+ +HR
Sbjct: 250 SEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 305
Query: 463 DIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDV 522
D++ AN+L+ +L K+ DFGL RL + + + APE GR T +DV
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 365
Query: 523 YAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKL 582
++FG+ + E+ R PG ++ +VLD + E E + L
Sbjct: 366 WSFGILLTELTTKGRVPYPGMVNR-----------EVLDQVERGYRMPCPPECPESLHDL 414
Query: 583 GLFCSHSNPDTRPSMRQVVQYLD 605
C +P+ RP+ + +L+
Sbjct: 415 MCQCWRKDPEERPTFEYLQAFLE 437
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 379 QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF 438
Q + E+ + + +V G GE+ + ++M GSLD++L R +
Sbjct: 60 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKV 119
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTT 497
I V GL YL E+ + ++HRD+KP+N+L+++ E KL DFG++ +L D
Sbjct: 120 SI--AVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 171
Query: 498 NVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWV 550
+ VGT Y+APE L+ + +D+++ G+ ++E+A GR P+ P + L+ +
Sbjct: 172 SFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAI 224
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 117/271 (43%), Gaps = 17/271 (6%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R S + K +G G+V+ G + +A+K + + F+ E M K+RH
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRHEK 74
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LVQL + + +V +YM GSL L L Q + +A G+ Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER- 132
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+HRD++ AN+L+ +L K+ DFGLARL + + + APE G
Sbjct: 133 --MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
R T +DV++FG+ + E+ R PG ++ +VLD + E
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPYPGMVN-----------REVLDQVERGYRMPCPPE 239
Query: 575 QMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
E + L C +P+ RP+ + +L+
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 116/271 (42%), Gaps = 17/271 (6%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R S + K +G G+V+ G + +A+K + + F+ E M KLRH
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 74
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LVQL + + +V +YM GSL L L Q + +A G+ Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER- 132
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+HRD+ AN+L+ +L K+ DFGLARL + + + APE G
Sbjct: 133 --MNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
R T +DV++FG+ + E+ R PG ++ +VLD + E
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPYPGMVN-----------REVLDQVERGYRMPCPPE 239
Query: 575 QMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
E + L C +P+ RP+ + +L+
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 126/271 (46%), Gaps = 17/271 (6%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R S K K G G+V+ + H ++AVK + S ++ F++E M L+H
Sbjct: 14 RESLKLEKKLGAGQFGEVWMATY-NKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDK 71
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L K + ++ ++M GSL L S+ + +A G+ ++ +
Sbjct: 72 LVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ- 129
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+ +HRD++ AN+L+ A L K+ DFGLAR+ + + + APE + G
Sbjct: 130 --RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG 187
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
T +DV++FG+ ++E+ R PG + VI ++G + PR E EE
Sbjct: 188 SFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--PEVIRALERGYRM----PRPENC-PEE 240
Query: 575 QMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
I+++ C + P+ RP+ + LD
Sbjct: 241 LYNIMMR----CWKNRPEERPTFEYIQSVLD 267
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 116/271 (42%), Gaps = 17/271 (6%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R S + K +G G+V+ G + +A+K + + F+ E M KLRH
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 74
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LVQL + + +V +YM G L L L Q + +A G+ Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER- 132
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+HRD++ AN+L+ +L K+ DFGLARL + + + APE G
Sbjct: 133 --MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
R T +DV++FG+ + E+ R PG ++ +VLD + E
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPYPGMVN-----------REVLDQVERGYRMPCPPE 239
Query: 575 QMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
E + L C +P+ RP+ + +L+
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 101/206 (49%), Gaps = 12/206 (5%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC---HDSDHGMKQFVSEIVSMGKLRHRN 394
YK + K GG VY + ++A+K + + + +K+F E+ + +L H+N
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF--RIIKGVAFGLLYLH 452
+V + LV +Y+ +L + + S+ S++ F +I+ G+
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHA----- 127
Query: 453 EEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLR 512
+ ++HRDIKP N+L+D++ K+ DFG+A+ + T +V+GTV Y +PE +
Sbjct: 128 --HDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAK 185
Query: 513 NGRGTTSTDVYAFGVFMLEVACGRRP 538
TD+Y+ G+ + E+ G P
Sbjct: 186 GEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 116/271 (42%), Gaps = 17/271 (6%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R S + K +G G+V+ G + +A+K + + F+ E M KLRH
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 74
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LVQL + + +V +YM G L L L Q + +A G+ Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER- 132
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+HRD++ AN+L+ +L K+ DFGLARL + + + APE G
Sbjct: 133 --MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
R T +DV++FG+ + E+ R PG ++ +VLD + E
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPYPGMVN-----------REVLDQVERGYRMPCPPE 239
Query: 575 QMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
E + L C +P+ RP+ + +L+
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 347 GGSGKVYRGVLPSSHAEIAVK--KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRR 404
G G VY+G H ++AVK V + ++ F +E+ + K RH N++ GY
Sbjct: 24 GSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 79
Query: 405 KGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDI 464
K +L +V + SL L+ + I + A G+ YLH + ++HRD+
Sbjct: 80 KPQLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDL 135
Query: 465 KPANVLLDADLEGKLGDFGLARLYDHGNDLHT-TNVVGTVGYLAPELLR---NGRGTTST 520
K N+ L DL K+GDFGLA + + H + G++ ++APE++R + +
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 195
Query: 521 DVYAFGVFMLEVACGRRP 538
DVYAFG+ + E+ G+ P
Sbjct: 196 DVYAFGIVLYELMTGQLP 213
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHG------MKQFVSEIVSMGKLR 391
Y+ LY G G+ + + S +I V K + D+G + VSE+ + +L+
Sbjct: 8 YEVLYTIGTGSYGRCQK-IRRKSDGKILVWK---ELDYGSMTEAEKQMLVSEVNLLRELK 63
Query: 392 HRNLVQL--RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF--RIIKGVAFG 447
H N+V+ R R L +V +Y G L ++ T+ + F R++ +
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 448 LLYLHEEWE--QVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGY 505
L H + VLHRD+KPANV LD KLGDFGLAR+ +H D VGT Y
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDF-AKEFVGTPYY 182
Query: 506 LAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
++PE + +D+++ G + E+ C P
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYEL-CALMP 214
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 347 GGSGKVYRGVLPSSHAEIAVK--KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRR 404
G G VY+G H ++AVK V + ++ F +E+ + K RH N++ GY
Sbjct: 19 GSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 74
Query: 405 KGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDI 464
K +L +V + SL L+ + I + A G+ YLH + ++HRD+
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDL 130
Query: 465 KPANVLLDADLEGKLGDFGLARLYDHGNDLHT-TNVVGTVGYLAPELLR---NGRGTTST 520
K N+ L DL K+GDFGLA + + H + G++ ++APE++R + +
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 521 DVYAFGVFMLEVACGRRP 538
DVYAFG+ + E+ G+ P
Sbjct: 191 DVYAFGIVLYELMTGQLP 208
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 130/270 (48%), Gaps = 25/270 (9%)
Query: 346 KGGSGKVYRGVLPSSHAE---IAVKKVCHDSDHG-MKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G VY G L + + AVK + +D G + QF++E + M H N++ L G
Sbjct: 41 RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI 100
Query: 402 C-RRKGELLLVYDYMPNGSLDKILYSNTR-PSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
C R +G L+V YM +G L + + T P++ F + VA G+ +L +
Sbjct: 101 CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFLAS---KKF 155
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLAR--LYDHGNDLHT-TNVVGTVGYLAPELLRNGRG 516
+HRD+ N +LD K+ DFGLAR L + +H T V ++A E L+ +
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKF 215
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQM 576
TT +DV++FGV + E+ P P +++ D + Y +G L + + +Y
Sbjct: 216 TTKSDVWSFGVLLWELMTRGAPPYP-DVNTFDITV-YLLQGRRLLQPEYCPDPLY----- 268
Query: 577 EIVLKLGLFCSHSNPDTRPSMRQVVQYLDG 606
E++LK C H + RPS ++V +
Sbjct: 269 EVMLK----CWHPKAEMRPSFSELVSRISA 294
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 347 GGSGKVYRGVLPSSHAEIAVK--KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRR 404
G G VY+G H ++AVK V + ++ F +E+ + K RH N++ GY
Sbjct: 24 GSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 79
Query: 405 KGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDI 464
K +L +V + SL L+ + I + A G+ YLH + ++HRD+
Sbjct: 80 KPQLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDL 135
Query: 465 KPANVLLDADLEGKLGDFGLARLYDHGNDLHT-TNVVGTVGYLAPELLR---NGRGTTST 520
K N+ L DL K+GDFGLA + + H + G++ ++APE++R + +
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 195
Query: 521 DVYAFGVFMLEVACGRRP 538
DVYAFG+ + E+ G+ P
Sbjct: 196 DVYAFGIVLYELMTGQLP 213
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 347 GGSGKVYRGVLPSSHAEIAVK--KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRR 404
G G VY+G H ++AVK V + ++ F +E+ + K RH N++ GY
Sbjct: 21 GSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 76
Query: 405 KGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDI 464
K +L +V + SL L+ + I + A G+ YLH + ++HRD+
Sbjct: 77 KPQLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDL 132
Query: 465 KPANVLLDADLEGKLGDFGLARLYDHGNDLHT-TNVVGTVGYLAPELLR---NGRGTTST 520
K N+ L DL K+GDFGLA + + H + G++ ++APE++R + +
Sbjct: 133 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 192
Query: 521 DVYAFGVFMLEVACGRRP 538
DVYAFG+ + E+ G+ P
Sbjct: 193 DVYAFGIVLYELMTGQLP 210
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 126/271 (46%), Gaps = 17/271 (6%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R S K K G G+V+ + H ++AVK + S ++ F++E M L+H
Sbjct: 187 RESLKLEKKLGAGQFGEVWMATY-NKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDK 244
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L K + ++ ++M GSL L S+ + +A G+ ++ +
Sbjct: 245 LVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ- 302
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+ +HRD++ AN+L+ A L K+ DFGLAR+ + + + APE + G
Sbjct: 303 --RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG 360
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
T +DV++FG+ ++E+ R PG + VI ++G + PR E EE
Sbjct: 361 SFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--PEVIRALERGYRM----PRPENC-PEE 413
Query: 575 QMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
I+++ C + P+ RP+ + LD
Sbjct: 414 LYNIMMR----CWKNRPEERPTFEYIQSVLD 440
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 347 GGSGKVYRGVLPSSHAEIAVK--KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRR 404
G G VY+G H ++AVK V + ++ F +E+ + K RH N++ GY
Sbjct: 46 GSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 101
Query: 405 KGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDI 464
K +L +V + SL L+ + I + A G+ YLH + ++HRD+
Sbjct: 102 KPQLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDL 157
Query: 465 KPANVLLDADLEGKLGDFGLARLYDHGNDLHT-TNVVGTVGYLAPELLR---NGRGTTST 520
K N+ L DL K+GDFGLA + + H + G++ ++APE++R + +
Sbjct: 158 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 217
Query: 521 DVYAFGVFMLEVACGRRP 538
DVYAFG+ + E+ G+ P
Sbjct: 218 DVYAFGIVLYELMTGQLP 235
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 131/270 (48%), Gaps = 31/270 (11%)
Query: 347 GGSGKVYRGVLPSSHAEIAVK--KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRR 404
G G VY+G H ++AVK V + ++ F +E+ + K RH N++ GY
Sbjct: 23 GSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 78
Query: 405 KGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRII---KGVAFGLLYLHEEWEQVVLH 461
K +L +V + SL Y + S F+ ++I + A G+ YLH + ++H
Sbjct: 79 KPQLAIVTQWCEGSSL----YHHLHASETKFEMKKLIDIARQTARGMDYLHA---KSIIH 131
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT-TNVVGTVGYLAPELLR---NGRGT 517
RD+K N+ L D K+GDFGLA + + H + G++ ++APE++R + +
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 191
Query: 518 TSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIY--VEEQ 575
+DVYAFG+ + E+ G+ P ++ D +I+ +G + P L + ++
Sbjct: 192 FQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIEMVGRGSL----SPDLSKVRSNCPKR 245
Query: 576 MEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
M+ +L C D RPS +++ ++
Sbjct: 246 MK---RLMAECLKKKRDERPSFPRILAEIE 272
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 347 GGSGKVYRGVLPSSHAEIAVK--KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRR 404
G G VY+G H ++AVK V + ++ F +E+ + K RH N++ GY
Sbjct: 47 GSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 102
Query: 405 KGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDI 464
K +L +V + SL L+ + I + A G+ YLH + ++HRD+
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDL 158
Query: 465 KPANVLLDADLEGKLGDFGLARLYDHGNDLHT-TNVVGTVGYLAPELLR---NGRGTTST 520
K N+ L DL K+GDFGLA + + H + G++ ++APE++R + +
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 218
Query: 521 DVYAFGVFMLEVACGRRP 538
DVYAFG+ + E+ G+ P
Sbjct: 219 DVYAFGIVLYELMTGQLP 236
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRK 405
GG G V R + + ++A+K+ + S +++ EI M KL H N+V R
Sbjct: 26 GGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGL 85
Query: 406 GEL------LLVYDYMPNGSLDKIL--YSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQ 457
+L LL +Y G L K L + N L ++ ++ L YLHE
Sbjct: 86 QKLAPNDLPLLAMEYCEGGDLRKYLNQFENC-CGLKEGPIRTLLSDISSALRYLHE---N 141
Query: 458 VVLHRDIKPANVLLD---ADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
++HRD+KP N++L L K+ D G A+ D G T VGT+ YLAPELL
Sbjct: 142 RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQYLAPELLEQK 199
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQP 541
+ T + D ++FG E G RP P
Sbjct: 200 KYTVTVDYWSFGTLAFECITGFRPFLP 226
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 30/227 (13%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDK-------ILYSNTRPSLNWF 435
E+ + ++H N+VQ R G L +V DY G L K +L+ + L+WF
Sbjct: 73 EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQ-ILDWF 131
Query: 436 QRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLH 495
+ + L ++H+ + +LHRDIK N+ L D +LGDFG+AR+ + +L
Sbjct: 132 VQ------ICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA 182
Query: 496 TTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQ 555
+GT YL+PE+ N +D++A G + E+ + + G + L
Sbjct: 183 RA-CIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVL------ 235
Query: 556 KGDVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQ 602
++ S P + Y + +V +L NP RPS+ +++
Sbjct: 236 --KIISGSFPPVSLHYSYDLRSLVSQL----FKRNPRDRPSVNSILE 276
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHG------MKQFVSEIVSMGKLR 391
Y+ LY G G+ + + S +I V K + D+G + VSE+ + +L+
Sbjct: 8 YEVLYTIGTGSYGRCQK-IRRKSDGKILVWK---ELDYGSMTEAEKQMLVSEVNLLRELK 63
Query: 392 HRNLVQL--RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF--RIIKGVAFG 447
H N+V+ R R L +V +Y G L ++ T+ + F R++ +
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 448 LLYLHEEWE--QVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGY 505
L H + VLHRD+KPANV LD KLGDFGLAR+ +H T VGT Y
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT-FVGTPYY 182
Query: 506 LAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
++PE + +D+++ G + E+ C P
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYEL-CALMP 214
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRK 405
GG G V R + + ++A+K+ + S +++ EI M KL H N+V R
Sbjct: 25 GGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGL 84
Query: 406 GEL------LLVYDYMPNGSLDKIL--YSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQ 457
+L LL +Y G L K L + N L ++ ++ L YLHE
Sbjct: 85 QKLAPNDLPLLAMEYCEGGDLRKYLNQFENC-CGLKEGPIRTLLSDISSALRYLHE---N 140
Query: 458 VVLHRDIKPANVLLD---ADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
++HRD+KP N++L L K+ D G A+ D G T VGT+ YLAPELL
Sbjct: 141 RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQYLAPELLEQK 198
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQP 541
+ T + D ++FG E G RP P
Sbjct: 199 KYTVTVDYWSFGTLAFECITGFRPFLP 225
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 347 GGSGKVYRGVLPSSHAEIAVK--KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRR 404
G G VY+G H ++AVK V + ++ F +E+ + K RH N++ GY
Sbjct: 19 GSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 74
Query: 405 KGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDI 464
K +L +V + SL L+ + I + A G+ YLH + ++HRD+
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDL 130
Query: 465 KPANVLLDADLEGKLGDFGLARLYDHGNDLHT-TNVVGTVGYLAPELLR---NGRGTTST 520
K N+ L DL K+GDFGLA + H + G++ ++APE++R + +
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 521 DVYAFGVFMLEVACGRRP 538
DVYAFG+ + E+ G+ P
Sbjct: 191 DVYAFGIVLYELMTGQLP 208
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 12/202 (5%)
Query: 339 KNLYKATKGGSGKV----YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
K L + KG G V Y + ++ +AVKK+ H ++ ++ F EI + L+H N
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 395 LVQLRGYCRRKGE--LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLH 452
+V+ +G C G L L+ +Y+P GSL L + + ++ + + + G+ YL
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLG 131
Query: 453 EEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPEL 510
+ +HRD+ N+L++ + K+GDFGL ++ + G + + APE
Sbjct: 132 ---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES 188
Query: 511 LRNGRGTTSTDVYAFGVFMLEV 532
L + + ++DV++FGV + E+
Sbjct: 189 LTESKFSVASDVWSFGVVLYEL 210
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 29/230 (12%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC-HDSDHGMKQFVSEIVSMGKLRHRNLV 396
Y NL +G G V + +A+KK+ + ++ + EI + + RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 397 QLRGYCR-----RKGELLLVYDYMPNGSLDKIL----YSNTRPSLNWFQRFRIIKGVAFG 447
+ R + ++ +V D M L K+L SN +Q R G
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------G 136
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT---TNVVGTVG 504
L Y+H VLHRD+KP+N+LL+ + K+ DFGLAR+ D +D HT T V T
Sbjct: 137 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRW 192
Query: 505 YLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE--LDLLDWVI 551
Y APE++ N +G T S D+++ G + E+ RP+ PG+ LD L+ ++
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHIL 241
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 29/230 (12%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC-HDSDHGMKQFVSEIVSMGKLRHRNLV 396
Y NL +G G V + +A+KK+ + ++ + EI + + RH N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 397 QLRGYCR-----RKGELLLVYDYMPNGSLDKIL----YSNTRPSLNWFQRFRIIKGVAFG 447
+ R + ++ +V D M L K+L SN +Q R G
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------G 138
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT---TNVVGTVG 504
L Y+H VLHRD+KP+N+LL+ + K+ DFGLAR+ D +D HT T V T
Sbjct: 139 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRW 194
Query: 505 YLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE--LDLLDWVI 551
Y APE++ N +G T S D+++ G + E+ RP+ PG+ LD L+ ++
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHIL 243
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 130/271 (47%), Gaps = 28/271 (10%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKV-CHDSDHGMKQFVSEIVSMGKLRHRNLV 396
+ L K KG G+V++G+ + +A+K + +++ ++ EI + + +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 397 QLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWE 456
+ G + +L ++ +Y+ GS +L L+ Q I++ + GL YLH E +
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKK 145
Query: 457 QVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTTNVVGTVGYLAPELLRNGR 515
+HRDIK ANVLL E KL DFG+A +L D + VGT ++APE+++
Sbjct: 146 ---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVGTPFWMAPEVIKQSA 200
Query: 516 GTTSTDVYAFGVFMLEVACGRRP---VQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYV 572
+ D+++ G+ +E+A G P + P ++ L + + P LEG Y
Sbjct: 201 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFL-----------IPKNNPPTLEGNYS 249
Query: 573 EEQMEIVLKLGLFCSHSNPDTRPSMRQVVQY 603
+ E V C + P RP+ ++++++
Sbjct: 250 KPLKEFVEA----CLNKEPSFRPTAKELLKH 276
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 113/215 (52%), Gaps = 17/215 (7%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDS-DHGM-KQFVSEIVSMGKLRHRN 394
Y+ L K +G G VY+ S +A+K++ D+ D G+ + EI + +L H N
Sbjct: 22 KYQKLEKVGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNT---RPSLNWFQRFRIIKGVAFGLLYL 451
+V L + L LV+++M L K+L N + S +++++GVA +
Sbjct: 81 IVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVA----HC 135
Query: 452 HEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL 511
H+ +LHRD+KP N+L+++D KL DFGLAR + +T VV T+ Y AP++L
Sbjct: 136 HQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVL 191
Query: 512 RNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGELD 545
+ +TS D+++ G E+ G +P+ PG D
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITG-KPLFPGVTD 225
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 29/230 (12%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC-HDSDHGMKQFVSEIVSMGKLRHRNLV 396
Y NL +G G V + +A+KK+ + ++ + EI + + RH N++
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 397 QLRGYCR-----RKGELLLVYDYMPNGSLDKIL----YSNTRPSLNWFQRFRIIKGVAFG 447
+ R + ++ +V D M L K+L SN +Q R G
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------G 144
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT---TNVVGTVG 504
L Y+H VLHRD+KP+N+LL+ + K+ DFGLAR+ D +D HT T V T
Sbjct: 145 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRW 200
Query: 505 YLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE--LDLLDWVI 551
Y APE++ N +G T S D+++ G + E+ RP+ PG+ LD L+ ++
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHIL 249
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 29/230 (12%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC-HDSDHGMKQFVSEIVSMGKLRHRNLV 396
Y NL +G G V + +A+KK+ + ++ + EI + + RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 397 QLRGYCR-----RKGELLLVYDYMPNGSLDKIL----YSNTRPSLNWFQRFRIIKGVAFG 447
+ R + ++ +V D M L K+L SN +Q R G
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------G 136
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT---TNVVGTVG 504
L Y+H VLHRD+KP+N+LL+ + K+ DFGLAR+ D +D HT T V T
Sbjct: 137 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRW 192
Query: 505 YLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE--LDLLDWVI 551
Y APE++ N +G T S D+++ G + E+ RP+ PG+ LD L+ ++
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHIL 241
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 12/202 (5%)
Query: 339 KNLYKATKGGSGKV----YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
K L + KG G V Y + ++ +AVKK+ H ++ ++ F EI + L+H N
Sbjct: 44 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 395 LVQLRGYCRRKGE--LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLH 452
+V+ +G C G L L+ +Y+P GSL L + + ++ + + + G+ YL
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL- 161
Query: 453 EEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPEL 510
+ +HRD+ N+L++ + K+GDFGL ++ + G + + APE
Sbjct: 162 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 219
Query: 511 LRNGRGTTSTDVYAFGVFMLEV 532
L + + ++DV++FGV + E+
Sbjct: 220 LTESKFSVASDVWSFGVVLYEL 241
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 99/198 (50%), Gaps = 10/198 (5%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRK 405
KG G VY G S+ IA+K++ + EI L+H+N+VQ G
Sbjct: 32 KGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSEN 91
Query: 406 GELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI-IKGVAFGLLYLHEEWEQVVLHRDI 464
G + + + +P GSL +L S P + Q K + GL YLH+ ++HRDI
Sbjct: 92 GFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDI 148
Query: 465 KPANVLLDADLEG--KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG-RG-TTST 520
K NVL++ G K+ DFG ++ G + T GT+ Y+APE++ G RG +
Sbjct: 149 KGDNVLINT-YSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGPRGYGKAA 206
Query: 521 DVYAFGVFMLEVACGRRP 538
D+++ G ++E+A G+ P
Sbjct: 207 DIWSLGCTIIEMATGKPP 224
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 113/215 (52%), Gaps = 17/215 (7%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDS-DHGM-KQFVSEIVSMGKLRHRN 394
Y+ L K +G G VY+ S +A+K++ D+ D G+ + EI + +L H N
Sbjct: 22 KYQKLEKVGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNT---RPSLNWFQRFRIIKGVAFGLLYL 451
+V L + L LV+++M L K+L N + S +++++GVA +
Sbjct: 81 IVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVA----HC 135
Query: 452 HEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL 511
H+ +LHRD+KP N+L+++D KL DFGLAR + +T VV T+ Y AP++L
Sbjct: 136 HQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVL 191
Query: 512 RNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGELD 545
+ +TS D+++ G E+ G +P+ PG D
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITG-KPLFPGVTD 225
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 347 GGSGKVYRGVLPSSHAEIAVK--KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRR 404
G G VY+G H ++AVK V + ++ F +E+ + K RH N++ GY
Sbjct: 19 GSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 405 KGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDI 464
+L +V + SL L+ + I + A G+ YLH + ++HRD+
Sbjct: 76 P-QLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDL 130
Query: 465 KPANVLLDADLEGKLGDFGLARLYDHGNDLHT-TNVVGTVGYLAPELLR---NGRGTTST 520
K N+ L DL K+GDFGLA + + H + G++ ++APE++R + +
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 521 DVYAFGVFMLEVACGRRP 538
DVYAFG+ + E+ G+ P
Sbjct: 191 DVYAFGIVLYELMTGQLP 208
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 29/230 (12%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC-HDSDHGMKQFVSEIVSMGKLRHRNLV 396
Y NL +G G V + +A+KK+ + ++ + EI + + RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 397 QLRGYCR-----RKGELLLVYDYMPNGSLDKIL----YSNTRPSLNWFQRFRIIKGVAFG 447
+ R + ++ +V D M L K+L SN +Q R G
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------G 136
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT---TNVVGTVG 504
L Y+H VLHRD+KP+N+LL+ + K+ DFGLAR+ D +D HT T V T
Sbjct: 137 LKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHD-HTGFLTEYVATRW 192
Query: 505 YLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE--LDLLDWVI 551
Y APE++ N +G T S D+++ G + E+ RP+ PG+ LD L+ ++
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHIL 241
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 29/230 (12%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC-HDSDHGMKQFVSEIVSMGKLRHRNLV 396
Y NL +G G V + +A+KK+ + ++ + EI + + RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 397 QLRGYCR-----RKGELLLVYDYMPNGSLDKIL----YSNTRPSLNWFQRFRIIKGVAFG 447
+ R + ++ +V D M L K+L SN +Q R G
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------G 136
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT---TNVVGTVG 504
L Y+H VLHRD+KP+N+LL+ + K+ DFGLAR+ D +D HT T V T
Sbjct: 137 LKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHD-HTGFLTEYVATRW 192
Query: 505 YLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE--LDLLDWVI 551
Y APE++ N +G T S D+++ G + E+ RP+ PG+ LD L+ ++
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEM-LSNRPIFPGKHYLDQLNHIL 241
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 29/230 (12%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC-HDSDHGMKQFVSEIVSMGKLRHRNLV 396
Y NL +G G V + +A+KK+ + ++ + EI + + RH N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 397 QLRGYCR-----RKGELLLVYDYMPNGSLDKIL----YSNTRPSLNWFQRFRIIKGVAFG 447
+ R + ++ +V D M L K+L SN +Q R G
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------G 134
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT---TNVVGTVG 504
L Y+H VLHRD+KP+N+LL+ + K+ DFGLAR+ D +D HT T V T
Sbjct: 135 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRW 190
Query: 505 YLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE--LDLLDWVI 551
Y APE++ N +G T S D+++ G + E+ RP+ PG+ LD L+ ++
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHIL 239
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 29/230 (12%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC-HDSDHGMKQFVSEIVSMGKLRHRNLV 396
Y NL +G G V + +A+KK+ + ++ + EI + + RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 397 QLRGYCR-----RKGELLLVYDYMPNGSLDKIL----YSNTRPSLNWFQRFRIIKGVAFG 447
+ R + ++ +V D M L K+L SN +Q R G
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------G 136
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT---TNVVGTVG 504
L Y+H VLHRD+KP+N+LL+ + K+ DFGLAR+ D +D HT T V T
Sbjct: 137 LKYIHS---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHD-HTGFLTEYVATRW 192
Query: 505 YLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE--LDLLDWVI 551
Y APE++ N +G T S D+++ G + E+ RP+ PG+ LD L+ ++
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEM-LSNRPIFPGKHYLDQLNHIL 241
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 130/271 (47%), Gaps = 28/271 (10%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKV-CHDSDHGMKQFVSEIVSMGKLRHRNLV 396
+ L K KG G+V++G+ + +A+K + +++ ++ EI + + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 397 QLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWE 456
+ G + +L ++ +Y+ GS +L L+ Q I++ + GL YLH E +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKK 125
Query: 457 QVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTTNVVGTVGYLAPELLRNGR 515
+HRDIK ANVLL E KL DFG+A +L D + VGT ++APE+++
Sbjct: 126 ---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVGTPFWMAPEVIKQSA 180
Query: 516 GTTSTDVYAFGVFMLEVACGRRP---VQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYV 572
+ D+++ G+ +E+A G P + P ++ L + + P LEG Y
Sbjct: 181 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFL-----------IPKNNPPTLEGNYS 229
Query: 573 EEQMEIVLKLGLFCSHSNPDTRPSMRQVVQY 603
+ E V C + P RP+ ++++++
Sbjct: 230 KPLKEFVEA----CLNKEPSFRPTAKELLKH 256
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 29/230 (12%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC-HDSDHGMKQFVSEIVSMGKLRHRNLV 396
Y NL +G G V + +A+KK+ + ++ + EI + + RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 397 QLRGYCR-----RKGELLLVYDYMPNGSLDKIL----YSNTRPSLNWFQRFRIIKGVAFG 447
+ R + ++ +V D M L K+L SN +Q R G
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKCQHLSNDHICYFLYQILR-------G 140
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT---TNVVGTVG 504
L Y+H VLHRD+KP+N+LL+ + K+ DFGLAR+ D +D HT T V T
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRW 196
Query: 505 YLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE--LDLLDWVI 551
Y APE++ N +G T S D+++ G + E+ RP+ PG+ LD L+ ++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHIL 245
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 29/230 (12%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC-HDSDHGMKQFVSEIVSMGKLRHRNLV 396
Y NL +G G V + +A+KK+ + ++ + EI + + RH N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 397 QLRGYCR-----RKGELLLVYDYMPNGSLDKIL----YSNTRPSLNWFQRFRIIKGVAFG 447
+ R + ++ +V D M L K+L SN +Q R G
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------G 134
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT---TNVVGTVG 504
L Y+H VLHRD+KP+N+LL+ + K+ DFGLAR+ D +D HT T V T
Sbjct: 135 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRW 190
Query: 505 YLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE--LDLLDWVI 551
Y APE++ N +G T S D+++ G + E+ RP+ PG+ LD L+ ++
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHIL 239
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 29/230 (12%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC-HDSDHGMKQFVSEIVSMGKLRHRNLV 396
Y NL +G G V + +A+KK+ + ++ + EI + + RH N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 397 QLRGYCR-----RKGELLLVYDYMPNGSLDKIL----YSNTRPSLNWFQRFRIIKGVAFG 447
+ R + ++ +V D M L K+L SN +Q R G
Sbjct: 105 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------G 156
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT---TNVVGTVG 504
L Y+H VLHRD+KP+N+LL+ + K+ DFGLAR+ D +D HT T V T
Sbjct: 157 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRW 212
Query: 505 YLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE--LDLLDWVI 551
Y APE++ N +G T S D+++ G + E+ RP+ PG+ LD L+ ++
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHIL 261
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 29/230 (12%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC-HDSDHGMKQFVSEIVSMGKLRHRNLV 396
Y NL +G G V + +A+KK+ + ++ + EI + + RH N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 397 QLRGYCR-----RKGELLLVYDYMPNGSLDKIL----YSNTRPSLNWFQRFRIIKGVAFG 447
+ R + ++ +V D M L K+L SN +Q R G
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------G 141
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT---TNVVGTVG 504
L Y+H VLHRD+KP+N+LL+ + K+ DFGLAR+ D +D HT T V T
Sbjct: 142 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRW 197
Query: 505 YLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE--LDLLDWVI 551
Y APE++ N +G T S D+++ G + E+ RP+ PG+ LD L+ ++
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHIL 246
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 29/230 (12%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC-HDSDHGMKQFVSEIVSMGKLRHRNLV 396
Y NL +G G V + +A+KK+ + ++ + EI + + RH N++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 397 QLRGYCR-----RKGELLLVYDYMPNGSLDKIL----YSNTRPSLNWFQRFRIIKGVAFG 447
+ R + ++ +V D M L K+L SN +Q R G
Sbjct: 91 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------G 142
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT---TNVVGTVG 504
L Y+H VLHRD+KP+N+LL+ + K+ DFGLAR+ D +D HT T V T
Sbjct: 143 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRW 198
Query: 505 YLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE--LDLLDWVI 551
Y APE++ N +G T S D+++ G + E+ RP+ PG+ LD L+ ++
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHIL 247
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 29/230 (12%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC-HDSDHGMKQFVSEIVSMGKLRHRNLV 396
Y NL +G G V + +A+KK+ + ++ + EI + + RH N++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 397 QLRGYCR-----RKGELLLVYDYMPNGSLDKIL----YSNTRPSLNWFQRFRIIKGVAFG 447
+ R + ++ +V D M L K+L SN +Q R G
Sbjct: 82 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------G 133
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT---TNVVGTVG 504
L Y+H VLHRD+KP+N+LL+ + K+ DFGLAR+ D +D HT T V T
Sbjct: 134 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRW 189
Query: 505 YLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE--LDLLDWVI 551
Y APE++ N +G T S D+++ G + E+ RP+ PG+ LD L+ ++
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHIL 238
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 29/230 (12%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC-HDSDHGMKQFVSEIVSMGKLRHRNLV 396
Y NL +G G V + +A+KK+ + ++ + EI + + RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 397 QLRGYCR-----RKGELLLVYDYMPNGSLDKIL----YSNTRPSLNWFQRFRIIKGVAFG 447
+ R + ++ +V D M L K+L SN +Q R G
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------G 140
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT---TNVVGTVG 504
L Y+H VLHRD+KP+N+LL+ + K+ DFGLAR+ D +D HT T V T
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRW 196
Query: 505 YLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE--LDLLDWVI 551
Y APE++ N +G T S D+++ G + E+ RP+ PG+ LD L+ ++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHIL 245
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 12/202 (5%)
Query: 339 KNLYKATKGGSGKV----YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
K L + KG G V Y + ++ +AVKK+ H ++ ++ F EI + L+H N
Sbjct: 17 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 395 LVQLRGYCRRKGE--LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLH 452
+V+ +G C G L L+ +Y+P GSL L + + ++ + + + G+ YL
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL- 134
Query: 453 EEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPEL 510
+ +HRD+ N+L++ + K+GDFGL ++ + G + + APE
Sbjct: 135 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 192
Query: 511 LRNGRGTTSTDVYAFGVFMLEV 532
L + + ++DV++FGV + E+
Sbjct: 193 LTESKFSVASDVWSFGVVLYEL 214
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 12/202 (5%)
Query: 339 KNLYKATKGGSGKV----YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
K L + KG G V Y + ++ +AVKK+ H ++ ++ F EI + L+H N
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 395 LVQLRGYCRRKGE--LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLH 452
+V+ +G C G L L+ +Y+P GSL L ++ ++ + + + G+ YL
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAE-RIDHIKLLQYTSQICKGMEYL- 133
Query: 453 EEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPEL 510
+ +HRD+ N+L++ + K+GDFGL ++ + G + + APE
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 511 LRNGRGTTSTDVYAFGVFMLEV 532
L + + ++DV++FGV + E+
Sbjct: 192 LTESKFSVASDVWSFGVVLYEL 213
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 347 GGSGKVYRGVLPSSHAEIAVK--KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRR 404
G G VY+G H ++AVK V + ++ F +E+ + K RH N++ GY
Sbjct: 39 GSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 94
Query: 405 KGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDI 464
K +L +V + SL L+ + I + A G+ YLH + ++HRD+
Sbjct: 95 KPQLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDL 150
Query: 465 KPANVLLDADLEGKLGDFGLARLYDHGNDLHT-TNVVGTVGYLAPELLR---NGRGTTST 520
K N+ L DL K+GDFGLA + H + G++ ++APE++R + +
Sbjct: 151 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 210
Query: 521 DVYAFGVFMLEVACGRRP 538
DVYAFG+ + E+ G+ P
Sbjct: 211 DVYAFGIVLYELMTGQLP 228
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 123/266 (46%), Gaps = 33/266 (12%)
Query: 358 PSSHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYM 415
P+ ++AVK + D ++ + +SE+ M + +H+N++ L G C + G L ++ +Y
Sbjct: 98 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 157
Query: 416 PNGSLDKILYSNTRPSLNWFQR--------------FRIIKGVAFGLLYLHEEWEQVVLH 461
G+L + L + P L + VA G+ YL + +H
Sbjct: 158 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIH 214
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDL-HTTNVVGTVGYLAPELLRNGRGTTST 520
RD+ NVL+ D K+ DFGLAR H + TTN V ++APE L + T +
Sbjct: 215 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 274
Query: 521 DVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
DV++FGV + E+ G P PG ++ + ++G +D +Y+
Sbjct: 275 DVWSFGVLLWEIFTLGGSPY-PGV--PVEELFKLLKEGHRMDKPSNCTNELYM------- 324
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLD 605
+ C H+ P RP+ +Q+V+ LD
Sbjct: 325 --MMRDCWHAVPSQRPTFKQLVEDLD 348
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 130/271 (47%), Gaps = 28/271 (10%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKV-CHDSDHGMKQFVSEIVSMGKLRHRNLV 396
+ L K KG G+V++G+ + +A+K + +++ ++ EI + + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 397 QLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWE 456
+ G + +L ++ +Y+ GS +L L+ Q I++ + GL YLH E +
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKK 140
Query: 457 QVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTTNVVGTVGYLAPELLRNGR 515
+HRDIK ANVLL E KL DFG+A +L D + VGT ++APE+++
Sbjct: 141 ---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVIKQSA 195
Query: 516 GTTSTDVYAFGVFMLEVACGRRP---VQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYV 572
+ D+++ G+ +E+A G P + P ++ L + + P LEG Y
Sbjct: 196 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFL-----------IPKNNPPTLEGNYS 244
Query: 573 EEQMEIVLKLGLFCSHSNPDTRPSMRQVVQY 603
+ E V C + P RP+ ++++++
Sbjct: 245 KPLKEFVEA----CLNKEPSFRPTAKELLKH 271
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 12/202 (5%)
Query: 339 KNLYKATKGGSGKV----YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
K L + KG G V Y + ++ +AVKK+ H ++ ++ F EI + L+H N
Sbjct: 12 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 395 LVQLRGYCRRKGE--LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLH 452
+V+ +G C G L L+ +Y+P GSL L + + ++ + + + G+ YL
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL- 129
Query: 453 EEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPEL 510
+ +HRD+ N+L++ + K+GDFGL ++ + G + + APE
Sbjct: 130 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 187
Query: 511 LRNGRGTTSTDVYAFGVFMLEV 532
L + + ++DV++FGV + E+
Sbjct: 188 LTESKFSVASDVWSFGVVLYEL 209
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 12/202 (5%)
Query: 339 KNLYKATKGGSGKV----YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
K L + KG G V Y + ++ +AVKK+ H ++ ++ F EI + L+H N
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 395 LVQLRGYCRRKGE--LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLH 452
+V+ +G C G L L+ +Y+P GSL L + + ++ + + + G+ YL
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL- 130
Query: 453 EEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPEL 510
+ +HRD+ N+L++ + K+GDFGL ++ + G + + APE
Sbjct: 131 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 511 LRNGRGTTSTDVYAFGVFMLEV 532
L + + ++DV++FGV + E+
Sbjct: 189 LTESKFSVASDVWSFGVVLYEL 210
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 12/202 (5%)
Query: 339 KNLYKATKGGSGKV----YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
K L + KG G V Y + ++ +AVKK+ H ++ ++ F EI + L+H N
Sbjct: 11 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 395 LVQLRGYCRRKGE--LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLH 452
+V+ +G C G L L+ +Y+P GSL L + + ++ + + + G+ YL
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL- 128
Query: 453 EEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPEL 510
+ +HRD+ N+L++ + K+GDFGL ++ + G + + APE
Sbjct: 129 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 186
Query: 511 LRNGRGTTSTDVYAFGVFMLEV 532
L + + ++DV++FGV + E+
Sbjct: 187 LTESKFSVASDVWSFGVVLYEL 208
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 12/202 (5%)
Query: 339 KNLYKATKGGSGKV----YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
K L + KG G V Y + ++ +AVKK+ H ++ ++ F EI + L+H N
Sbjct: 18 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 395 LVQLRGYCRRKGE--LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLH 452
+V+ +G C G L L+ +Y+P GSL L + + ++ + + + G+ YL
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL- 135
Query: 453 EEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPEL 510
+ +HRD+ N+L++ + K+GDFGL ++ + G + + APE
Sbjct: 136 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 193
Query: 511 LRNGRGTTSTDVYAFGVFMLEV 532
L + + ++DV++FGV + E+
Sbjct: 194 LTESKFSVASDVWSFGVVLYEL 215
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 12/202 (5%)
Query: 339 KNLYKATKGGSGKV----YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
K L + KG G V Y + ++ +AVKK+ H ++ ++ F EI + L+H N
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 395 LVQLRGYCRRKGE--LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLH 452
+V+ +G C G L L+ +Y+P GSL L + + ++ + + + G+ YL
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL- 133
Query: 453 EEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPEL 510
+ +HRD+ N+L++ + K+GDFGL ++ + G + + APE
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 511 LRNGRGTTSTDVYAFGVFMLEV 532
L + + ++DV++FGV + E+
Sbjct: 192 LTESKFSVASDVWSFGVVLYEL 213
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 123/266 (46%), Gaps = 33/266 (12%)
Query: 358 PSSHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYM 415
P+ ++AVK + D ++ + +SE+ M + +H+N++ L G C + G L ++ +Y
Sbjct: 57 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 416 PNGSLDKILYSNTRPSLNWF--------------QRFRIIKGVAFGLLYLHEEWEQVVLH 461
G+L + L + P L + VA G+ YL + +H
Sbjct: 117 SKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIH 173
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDL-HTTNVVGTVGYLAPELLRNGRGTTST 520
RD+ NVL+ D K+ DFGLAR H + TTN V ++APE L + T +
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 521 DVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
DV++FGV + E+ G P PG ++ + ++G +D +Y+
Sbjct: 234 DVWSFGVLLWEIFTLGGSPY-PGV--PVEELFKLLKEGHRMDKPSNCTNELYM------- 283
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLD 605
+ C H+ P RP+ +Q+V+ LD
Sbjct: 284 --MMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 12/202 (5%)
Query: 339 KNLYKATKGGSGKV----YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
K L + KG G V Y + ++ +AVKK+ H ++ ++ F EI + L+H N
Sbjct: 19 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 395 LVQLRGYCRRKGE--LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLH 452
+V+ +G C G L L+ +Y+P GSL L + + ++ + + + G+ YL
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL- 136
Query: 453 EEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPEL 510
+ +HRD+ N+L++ + K+GDFGL ++ + G + + APE
Sbjct: 137 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 194
Query: 511 LRNGRGTTSTDVYAFGVFMLEV 532
L + + ++DV++FGV + E+
Sbjct: 195 LTESKFSVASDVWSFGVVLYEL 216
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 99/198 (50%), Gaps = 10/198 (5%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRK 405
KG G VY G S+ IA+K++ + EI L+H+N+VQ G
Sbjct: 18 KGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSEN 77
Query: 406 GELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI-IKGVAFGLLYLHEEWEQVVLHRDI 464
G + + + +P GSL +L S P + Q K + GL YLH+ ++HRDI
Sbjct: 78 GFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDI 134
Query: 465 KPANVLLDADLEG--KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG-RGT-TST 520
K NVL++ G K+ DFG ++ G + T GT+ Y+APE++ G RG +
Sbjct: 135 KGDNVLINT-YSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGPRGYGKAA 192
Query: 521 DVYAFGVFMLEVACGRRP 538
D+++ G ++E+A G+ P
Sbjct: 193 DIWSLGCTIIEMATGKPP 210
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 12/202 (5%)
Query: 339 KNLYKATKGGSGKV----YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
K L + KG G V Y + ++ +AVKK+ H ++ ++ F EI + L+H N
Sbjct: 20 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 395 LVQLRGYCRRKGE--LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLH 452
+V+ +G C G L L+ +Y+P GSL L + + ++ + + + G+ YL
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL- 137
Query: 453 EEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPEL 510
+ +HRD+ N+L++ + K+GDFGL ++ + G + + APE
Sbjct: 138 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 195
Query: 511 LRNGRGTTSTDVYAFGVFMLEV 532
L + + ++DV++FGV + E+
Sbjct: 196 LTESKFSVASDVWSFGVVLYEL 217
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 12/202 (5%)
Query: 339 KNLYKATKGGSGKV----YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
K L + KG G V Y + ++ +AVKK+ H ++ ++ F EI + L+H N
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 395 LVQLRGYCRRKGE--LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLH 452
+V+ +G C G L L+ +Y+P GSL L + + ++ + + + G+ YL
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL- 130
Query: 453 EEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPEL 510
+ +HRD+ N+L++ + K+GDFGL ++ + G + + APE
Sbjct: 131 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 511 LRNGRGTTSTDVYAFGVFMLEV 532
L + + ++DV++FGV + E+
Sbjct: 189 LTESKFSVASDVWSFGVVLYEL 210
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 347 GGSGKVYRGVLPSSHAEIAVK--KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRR 404
G G VY+G H ++AVK V + ++ F +E+ + K RH N++ GY
Sbjct: 47 GSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 102
Query: 405 KGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDI 464
K +L +V + SL L+ + I + A G+ YLH + ++HRD+
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDL 158
Query: 465 KPANVLLDADLEGKLGDFGLARLYDHGNDLHT-TNVVGTVGYLAPELLR---NGRGTTST 520
K N+ L DL K+GDFGLA + H + G++ ++APE++R + +
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 218
Query: 521 DVYAFGVFMLEVACGRRP 538
DVYAFG+ + E+ G+ P
Sbjct: 219 DVYAFGIVLYELMTGQLP 236
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 122/251 (48%), Gaps = 32/251 (12%)
Query: 363 EIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDK 422
++AVK + + +F E +M KL H LV+ G C ++ + +V +Y+ NG L
Sbjct: 34 DVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLN 92
Query: 423 ILYSNTR---PSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKL 479
L S+ + PS + + +G+AF L H+ +HRD+ N L+D DL K+
Sbjct: 93 YLRSHGKGLEPSQLLEMCYDVCEGMAF--LESHQ-----FIHRDLAARNCLVDRDLCVKV 145
Query: 480 GDFGLARLYDHGNDLHTTNVVGT---VGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACG 535
DFG+ R + D + VGT V + APE+ + ++ +DV+AFG+ M EV + G
Sbjct: 146 SDFGMTR---YVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLG 202
Query: 536 RRPVQPGELDLLDWVIDYWQKGDVLDASD-PRLEGIYVEEQMEIVLKLGLFCSHSNPDTR 594
+ P DL Y VL S RL ++ + + ++ C H P+ R
Sbjct: 203 KMP-----YDL------YTNSEVVLKVSQGHRLYRPHLAS--DTIYQIMYSCWHELPEKR 249
Query: 595 PSMRQVVQYLD 605
P+ +Q++ ++
Sbjct: 250 PTFQQLLSSIE 260
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 130/270 (48%), Gaps = 31/270 (11%)
Query: 347 GGSGKVYRGVLPSSHAEIAVK--KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRR 404
G G VY+G H ++AVK V + ++ F +E+ + K RH N++ GY
Sbjct: 35 GSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 90
Query: 405 KGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRII---KGVAFGLLYLHEEWEQVVLH 461
K +L +V + SL Y + S F+ ++I + A G+ YLH + ++H
Sbjct: 91 KPQLAIVTQWCEGSSL----YHHLHASETKFEMKKLIDIARQTARGMDYLHA---KSIIH 143
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT-TNVVGTVGYLAPELLR---NGRGT 517
RD+K N+ L D K+GDFGLA + H + G++ ++APE++R + +
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 518 TSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIY--VEEQ 575
+DVYAFG+ + E+ G+ P ++ D +I+ +G + P L + ++
Sbjct: 204 FQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIEMVGRGSL----SPDLSKVRSNCPKR 257
Query: 576 MEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
M+ +L C D RPS +++ ++
Sbjct: 258 MK---RLMAECLKKKRDERPSFPRILAEIE 284
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 29/230 (12%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC-HDSDHGMKQFVSEIVSMGKLRHRNLV 396
Y NL +G G V + +A+KK+ + ++ + EI + + RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 397 QLRGYCR-----RKGELLLVYDYMPNGSLDKIL----YSNTRPSLNWFQRFRIIKGVAFG 447
+ R + ++ +V D M L K+L SN +Q R G
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------G 140
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT---TNVVGTVG 504
L Y+H VLHRD+KP+N+LL+ + K+ DFGLAR+ D +D HT T V T
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHD-HTGFLTEYVATRW 196
Query: 505 YLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE--LDLLDWVI 551
Y APE++ N +G T S D+++ G + E+ RP+ PG+ LD L+ ++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHIL 245
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 130/271 (47%), Gaps = 28/271 (10%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKV-CHDSDHGMKQFVSEIVSMGKLRHRNLV 396
+ L K KG G+V++G+ + +A+K + +++ ++ EI + + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 397 QLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWE 456
+ G + +L ++ +Y+ GS +L L+ Q I++ + GL YLH E +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKK 125
Query: 457 QVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTTNVVGTVGYLAPELLRNGR 515
+HRDIK ANVLL E KL DFG+A +L D + VGT ++APE+++
Sbjct: 126 ---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVIKQSA 180
Query: 516 GTTSTDVYAFGVFMLEVACGRRP---VQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYV 572
+ D+++ G+ +E+A G P + P ++ L + + P LEG Y
Sbjct: 181 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFL-----------IPKNNPPTLEGNYS 229
Query: 573 EEQMEIVLKLGLFCSHSNPDTRPSMRQVVQY 603
+ E V C + P RP+ ++++++
Sbjct: 230 KPLKEFVEA----CLNKEPSFRPTAKELLKH 256
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 12/202 (5%)
Query: 339 KNLYKATKGGSGKV----YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
K L + KG G V Y + ++ +AVKK+ H ++ ++ F EI + L+H N
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 395 LVQLRGYCRRKGE--LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLH 452
+V+ +G C G L L+ +Y+P GSL L + + ++ + + + G+ YL
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL- 148
Query: 453 EEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPEL 510
+ +HRD+ N+L++ + K+GDFGL ++ + G + + APE
Sbjct: 149 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 511 LRNGRGTTSTDVYAFGVFMLEV 532
L + + ++DV++FGV + E+
Sbjct: 207 LTESKFSVASDVWSFGVVLYEL 228
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 29/230 (12%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC-HDSDHGMKQFVSEIVSMGKLRHRNLV 396
Y NL +G G V + +A+KK+ + ++ + EI + + RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 397 QLRGYCR-----RKGELLLVYDYMPNGSLDKIL----YSNTRPSLNWFQRFRIIKGVAFG 447
+ R + ++ +V D M L K+L SN +Q R G
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------G 140
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT---TNVVGTVG 504
L Y+H VLHRD+KP+N+LL+ + K+ DFGLAR+ D +D HT T V T
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHD-HTGFLTEYVATRW 196
Query: 505 YLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE--LDLLDWVI 551
Y APE++ N +G T S D+++ G + E+ RP+ PG+ LD L+ ++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEM-LSNRPIFPGKHYLDQLNHIL 245
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 120/276 (43%), Gaps = 37/276 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHG-------MKQFVSEIVSMGKLRHRNLVQL 398
KGG G V++G L + +A+K + G ++F E+ M L H N+V+L
Sbjct: 29 KGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKL 88
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
G +V +++P G L L P + W + R++ +A G+ Y+ + +
Sbjct: 89 YGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLDIALGIEYMQNQNPPI 145
Query: 459 VLHRDIKPANVLL-----DADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL-- 511
V HRD++ N+ L +A + K+ DFGL++ H + ++G ++APE +
Sbjct: 146 V-HRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS----VSGLLGNFQWMAPETIGA 200
Query: 512 RNGRGTTSTDVYAFGVFMLEVACGRRPVQP---GELDLLDWVIDYWQKGDVLDASDPRLE 568
T D Y+F + + + G P G++ ++ + + + + + PRL
Sbjct: 201 EEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLR 260
Query: 569 GIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYL 604
+ +E C +P RP +V+ L
Sbjct: 261 NV-IE-----------LCWSGDPKKRPHFSYIVKEL 284
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 112/230 (48%), Gaps = 29/230 (12%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC-HDSDHGMKQFVSEIVSMGKLRHRNLV 396
Y NL +G G V + +A+KK+ + ++ + EI + RH N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 397 QLRGYCR-----RKGELLLVYDYMPNGSLDKIL----YSNTRPSLNWFQRFRIIKGVAFG 447
+ R + ++ +V D M L K+L SN +Q R G
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------G 138
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT---TNVVGTVG 504
L Y+H VLHRD+KP+N+LL+ + K+ DFGLAR+ D +D HT T V T
Sbjct: 139 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRW 194
Query: 505 YLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE--LDLLDWVI 551
Y APE++ N +G T S D+++ G + E+ RP+ PG+ LD L+ ++
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHIL 243
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 123/266 (46%), Gaps = 33/266 (12%)
Query: 358 PSSHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYM 415
P+ ++AVK + D ++ + +SE+ M + +H+N++ L G C + G L ++ +Y
Sbjct: 42 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 101
Query: 416 PNGSLDKILYSNTRPSLNWFQR--------------FRIIKGVAFGLLYLHEEWEQVVLH 461
G+L + L + P L + VA G+ YL + +H
Sbjct: 102 SKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIH 158
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDL-HTTNVVGTVGYLAPELLRNGRGTTST 520
RD+ NVL+ D K+ DFGLAR H + TTN V ++APE L + T +
Sbjct: 159 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 218
Query: 521 DVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
DV++FGV + E+ G P PG ++ + ++G +D +Y+
Sbjct: 219 DVWSFGVLLWEIFTLGGSPY-PGV--PVEELFKLLKEGHRMDKPSNCTNELYM------- 268
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLD 605
+ C H+ P RP+ +Q+V+ LD
Sbjct: 269 --MMRDCWHAVPSQRPTFKQLVEDLD 292
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 12/202 (5%)
Query: 339 KNLYKATKGGSGKV----YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
K L + KG G V Y + ++ +AVKK+ H ++ ++ F EI + L+H N
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 395 LVQLRGYCRRKGE--LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLH 452
+V+ +G C G L L+ +Y+P GSL L + + ++ + + + G+ YL
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL- 148
Query: 453 EEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPEL 510
+ +HRD+ N+L++ + K+GDFGL ++ + G + + APE
Sbjct: 149 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 511 LRNGRGTTSTDVYAFGVFMLEV 532
L + + ++DV++FGV + E+
Sbjct: 207 LTESKFSVASDVWSFGVVLYEL 228
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 123/266 (46%), Gaps = 33/266 (12%)
Query: 358 PSSHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYM 415
P+ ++AVK + D ++ + +SE+ M + +H+N++ L G C + G L ++ +Y
Sbjct: 57 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 416 PNGSLDKILYSNTRPSLNWFQR--------------FRIIKGVAFGLLYLHEEWEQVVLH 461
G+L + L + P L + VA G+ YL + +H
Sbjct: 117 SKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIH 173
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDL-HTTNVVGTVGYLAPELLRNGRGTTST 520
RD+ NVL+ D K+ DFGLAR H + TTN V ++APE L + T +
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 521 DVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
DV++FGV + E+ G P PG ++ + ++G +D +Y+
Sbjct: 234 DVWSFGVLLWEIFTLGGSPY-PGV--PVEELFKLLKEGHRMDKPSNCTNELYM------- 283
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLD 605
+ C H+ P RP+ +Q+V+ LD
Sbjct: 284 --MMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 86/161 (53%), Gaps = 13/161 (8%)
Query: 376 GMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGE--LLLVYDYMPNGSLDKILYSNTRPSLN 433
G KQ EI + L H ++++ +G C +GE L LV +Y+P GSL L R S+
Sbjct: 62 GWKQ---EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIG 115
Query: 434 WFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGND 493
Q + + G+ YLH Q +HR++ NVLLD D K+GDFGLA+ G++
Sbjct: 116 LAQLLLFAQQICEGMAYLHS---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 172
Query: 494 LHTTNVVGT--VGYLAPELLRNGRGTTSTDVYAFGVFMLEV 532
+ G V + APE L+ + ++DV++FGV + E+
Sbjct: 173 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 213
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 123/266 (46%), Gaps = 33/266 (12%)
Query: 358 PSSHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYM 415
P+ ++AVK + D ++ + +SE+ M + +H+N++ L G C + G L ++ +Y
Sbjct: 49 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 108
Query: 416 PNGSLDKILYSNTRPSLNWFQR--------------FRIIKGVAFGLLYLHEEWEQVVLH 461
G+L + L + P L + VA G+ YL + +H
Sbjct: 109 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIH 165
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDL-HTTNVVGTVGYLAPELLRNGRGTTST 520
RD+ NVL+ D K+ DFGLAR H + TTN V ++APE L + T +
Sbjct: 166 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 225
Query: 521 DVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
DV++FGV + E+ G P PG ++ + ++G +D +Y+
Sbjct: 226 DVWSFGVLLWEIFTLGGSPY-PGV--PVEELFKLLKEGHRMDKPSNCTNELYM------- 275
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLD 605
+ C H+ P RP+ +Q+V+ LD
Sbjct: 276 --MMRDCWHAVPSQRPTFKQLVEDLD 299
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 123/276 (44%), Gaps = 26/276 (9%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R S K + + G G+V+ G +S ++AVK + ++ F+ E M L+H
Sbjct: 12 RESIKLVKRLGAGQFGEVWMGYYNNS-TKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDK 69
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L R+ + ++ +YM GSL L S+ + + +A G+ Y+
Sbjct: 70 LVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER- 128
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+ +HRD++ ANVL+ L K+ DFGLAR+ + + + APE + G
Sbjct: 129 --KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG 186
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASD-----PRLEG 569
T +DV++FG+ + E+ + PG + DV+ A PR+E
Sbjct: 187 CFTIKSDVWSFGILLYEIVTYGKIPYPGRTN-----------ADVMTALSQGYRMPRVEN 235
Query: 570 IYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
+++ ++K+ C + RP+ + LD
Sbjct: 236 --CPDELYDIMKM---CWKEKAEERPTFDYLQSVLD 266
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 123/266 (46%), Gaps = 33/266 (12%)
Query: 358 PSSHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYM 415
P+ ++AVK + D ++ + +SE+ M + +H+N++ L G C + G L ++ +Y
Sbjct: 57 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 416 PNGSLDKILYSNTRPSLNWFQR--------------FRIIKGVAFGLLYLHEEWEQVVLH 461
G+L + L + P L + VA G+ YL + +H
Sbjct: 117 SKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIH 173
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDL-HTTNVVGTVGYLAPELLRNGRGTTST 520
RD+ NVL+ D K+ DFGLAR H + TTN V ++APE L + T +
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 521 DVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
DV++FGV + E+ G P PG ++ + ++G +D +Y+
Sbjct: 234 DVWSFGVLLWEIFTLGGSPY-PGV--PVEELFKLLKEGHRMDKPSNCTNELYM------- 283
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLD 605
+ C H+ P RP+ +Q+V+ LD
Sbjct: 284 --MMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 123/266 (46%), Gaps = 33/266 (12%)
Query: 358 PSSHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYM 415
P+ ++AVK + D ++ + +SE+ M + +H+N++ L G C + G L ++ +Y
Sbjct: 46 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 105
Query: 416 PNGSLDKILYSNTRPSLNWFQR--------------FRIIKGVAFGLLYLHEEWEQVVLH 461
G+L + L + P L + VA G+ YL + +H
Sbjct: 106 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIH 162
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDL-HTTNVVGTVGYLAPELLRNGRGTTST 520
RD+ NVL+ D K+ DFGLAR H + TTN V ++APE L + T +
Sbjct: 163 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 222
Query: 521 DVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
DV++FGV + E+ G P PG ++ + ++G +D +Y+
Sbjct: 223 DVWSFGVLLWEIFTLGGSPY-PGV--PVEELFKLLKEGHRMDKPSNCTNELYM------- 272
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLD 605
+ C H+ P RP+ +Q+V+ LD
Sbjct: 273 --MMRDCWHAVPSQRPTFKQLVEDLD 296
>pdb|1GNZ|A Chain A, Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)metal
Free Form
Length = 257
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 16/164 (9%)
Query: 102 GHGMAFFISPSTDFSEAVAGSHLGIFNRSNNGQFT-NHIFAIELDTVQSPEFNDIDGNHV 160
G+AFF++P D AG +LG+FN+S Q + N + A+E DT +P F + H+
Sbjct: 87 ADGLAFFLAPP-DSDVKDAGEYLGLFNKSTATQPSKNQVVAVEFDTWTNPNFPEPSYRHI 145
Query: 161 GIDVNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWIDYNGQEKLVNVTLAPVPNPK 220
GI+VN + S + K +E + SGK I Y+G +++ V L+ P
Sbjct: 146 GINVNSIVSVAT----------KRWEDSDIFSGKIATARISYDGSAEILTVVLS---YPD 192
Query: 221 PSRPLLSTSIDLSQILQDSMYVGLSAATG-TRVSDYYILGWSFN 263
S +LS S+D+ Q L +S+ VG+SA+TG + YIL W F+
Sbjct: 193 GSDYILSHSVDMRQNLPESVRVGISASTGNNQFLTVYILSWRFS 236
>pdb|1HQL|A Chain A, The Xenograft Antigen In Complex With The B4 Isolectin Of
Griffonia Simplicifolia Lectin-1
pdb|1HQL|B Chain B, The Xenograft Antigen In Complex With The B4 Isolectin Of
Griffonia Simplicifolia Lectin-1
Length = 257
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 16/164 (9%)
Query: 102 GHGMAFFISPSTDFSEAVAGSHLGIFNRSNNGQFT-NHIFAIELDTVQSPEFNDIDGNHV 160
G+AFF++P D AG +LG+FN+S Q + N + A+E DT +P F + H+
Sbjct: 87 ADGLAFFLAPP-DSDVKDAGEYLGLFNKSTATQPSKNQVVAVEFDTWTNPNFPEPSYRHI 145
Query: 161 GIDVNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWIDYNGQEKLVNVTLAPVPNPK 220
GI+VN + S + K +E + SGK I Y+G +++ V L+ P
Sbjct: 146 GINVNSIVSVAT----------KRWEDSDIFSGKIATARISYDGSAEILTVVLS---YPD 192
Query: 221 PSRPLLSTSIDLSQILQDSMYVGLSAATG-TRVSDYYILGWSFN 263
S +LS S+D+ Q L +S+ VG+SA+TG + YIL W F+
Sbjct: 193 GSDYILSHSVDMRQNLPESVRVGISASTGNNQFLTVYILSWRFS 236
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 124/280 (44%), Gaps = 40/280 (14%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKV----CHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
G + V ++A+K++ C S M + + EI +M + H N+V
Sbjct: 26 GATAVVQAAYCAPKKEKVAIKRINLEKCQTS---MDELLKEIQAMSQCHHPNIVSYYTSF 82
Query: 403 RRKGELLLVYDYMPNGSLDKILY------SNTRPSLNWFQRFRIIKGVAFGLLYLHEEWE 456
K EL LV + GS+ I+ + L+ I++ V GL YLH+ +
Sbjct: 83 VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ 142
Query: 457 QVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNV----VGTVGYLAPELLR 512
+HRD+K N+LL D ++ DFG++ G D+ V VGT ++APE++
Sbjct: 143 ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME 199
Query: 513 NGRGTT-STDVYAFGVFMLEVACGRRPVQ---PGELDLLDWVIDYWQKGDVLDASDPRLE 568
RG D+++FG+ +E+A G P P ++ +L L P LE
Sbjct: 200 QVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML-----------TLQNDPPSLE 248
Query: 569 GIYVEEQM-----EIVLKLGLFCSHSNPDTRPSMRQVVQY 603
+++M + K+ C +P+ RP+ +++++
Sbjct: 249 TGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 18/213 (8%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHG------MKQFVSEIVSMGKLR 391
Y+ LY G G+ + + S +I V K + D+G + VSE+ + +L+
Sbjct: 8 YEVLYTIGTGSYGRCQK-IRRKSDGKILVWK---ELDYGSMTEAEKQMLVSEVNLLRELK 63
Query: 392 HRNLVQL--RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF--RIIKGVAFG 447
H N+V+ R R L +V +Y G L ++ T+ + F R++ +
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 448 LLYLHEEWE--QVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGY 505
L H + VLHRD+KPANV LD KLGDFGLAR+ +H VGT Y
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF-AKAFVGTPYY 182
Query: 506 LAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
++PE + +D+++ G + E+ C P
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYEL-CALMP 214
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 86/161 (53%), Gaps = 13/161 (8%)
Query: 376 GMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGE--LLLVYDYMPNGSLDKILYSNTRPSLN 433
G KQ EI + L H ++++ +G C +GE L LV +Y+P GSL L R S+
Sbjct: 62 GWKQ---EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIG 115
Query: 434 WFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGND 493
Q + + G+ YLH Q +HR++ NVLLD D K+GDFGLA+ G++
Sbjct: 116 LAQLLLFAQQICEGMAYLHA---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 172
Query: 494 LHTTNVVGT--VGYLAPELLRNGRGTTSTDVYAFGVFMLEV 532
+ G V + APE L+ + ++DV++FGV + E+
Sbjct: 173 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 213
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 123/266 (46%), Gaps = 33/266 (12%)
Query: 358 PSSHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYM 415
P+ ++AVK + D ++ + +SE+ M + +H+N++ L G C + G L ++ +Y
Sbjct: 57 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 416 PNGSLDKILYSNTRPSLNWFQR--------------FRIIKGVAFGLLYLHEEWEQVVLH 461
G+L + L + P L + VA G+ YL + +H
Sbjct: 117 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIH 173
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDL-HTTNVVGTVGYLAPELLRNGRGTTST 520
RD+ NVL+ D K+ DFGLAR H + TTN V ++APE L + T +
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 521 DVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
DV++FGV + E+ G P PG ++ + ++G +D +Y+
Sbjct: 234 DVWSFGVLLWEIFTLGGSPY-PGV--PVEELFKLLKEGHRMDKPSNCTNELYM------- 283
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLD 605
+ C H+ P RP+ +Q+V+ LD
Sbjct: 284 --MMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 103/202 (50%), Gaps = 12/202 (5%)
Query: 339 KNLYKATKGGSGKV----YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
K L + KG G V Y + ++ +AVKK+ H ++ ++ F EI + L+H N
Sbjct: 14 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 395 LVQLRGYCRRKGE--LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLH 452
+V+ +G C G L L+ +Y+P GSL L + + ++ + + + G+ YL
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLG 132
Query: 453 EEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPEL 510
+ +HR++ N+L++ + K+GDFGL ++ + + G + + APE
Sbjct: 133 ---TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 511 LRNGRGTTSTDVYAFGVFMLEV 532
L + + ++DV++FGV + E+
Sbjct: 190 LTESKFSVASDVWSFGVVLYEL 211
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 123/266 (46%), Gaps = 33/266 (12%)
Query: 358 PSSHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYM 415
P+ ++AVK + D ++ + +SE+ M + +H+N++ L G C + G L ++ +Y
Sbjct: 50 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 109
Query: 416 PNGSLDKILYSNTRPSLNWFQR--------------FRIIKGVAFGLLYLHEEWEQVVLH 461
G+L + L + P L + VA G+ YL + +H
Sbjct: 110 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIH 166
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDL-HTTNVVGTVGYLAPELLRNGRGTTST 520
RD+ NVL+ D K+ DFGLAR H + TTN V ++APE L + T +
Sbjct: 167 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 226
Query: 521 DVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
DV++FGV + E+ G P PG ++ + ++G +D +Y+
Sbjct: 227 DVWSFGVLLWEIFTLGGSPY-PGV--PVEELFKLLKEGHRMDKPSNCTNELYM------- 276
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLD 605
+ C H+ P RP+ +Q+V+ LD
Sbjct: 277 --MMRDCWHAVPSQRPTFKQLVEDLD 300
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 116/228 (50%), Gaps = 25/228 (10%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC-HDSDHGMKQFVSEIVSMGKLRHRNLV 396
Y L +G G V +A+KK+ + ++ + EI + + RH N++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 397 QLRGYCRRKG-----ELLLVYDYMPNGSLDKILYSN--TRPSLNWFQRFRIIKGVAFGLL 449
+R R ++ +V D M L K+L S + + +F ++I++G L
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLM-ETDLYKLLKSQQLSNDHICYFL-YQILRG----LK 158
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT---TNVVGTVGYL 506
Y+H VLHRD+KP+N+L++ + K+ DFGLAR+ D +D HT T V T Y
Sbjct: 159 YIHS---ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHD-HTGFLTEXVATRWYR 214
Query: 507 APELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE--LDLLDWVI 551
APE++ N +G T S D+++ G + E+ RP+ PG+ LD L+ ++
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEM-LSNRPIFPGKHYLDQLNHIL 261
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 97/194 (50%), Gaps = 28/194 (14%)
Query: 364 IAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKI 423
+AVK + SD+ K F E + L+H ++V+ G C L++V++YM +G L+K
Sbjct: 46 VAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKF 105
Query: 424 LYS-----------NTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLD 472
L + N L Q I + +A G++YL Q +HRD+ N L+
Sbjct: 106 LRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVG 162
Query: 473 ADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG-------YLAPELLRNGRGTTSTDVYAF 525
+L K+GDFG++R D+++T+ G ++ PE + + TT +DV++
Sbjct: 163 ENLLVKIGDFGMSR------DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSL 216
Query: 526 GVFMLEV-ACGRRP 538
GV + E+ G++P
Sbjct: 217 GVVLWEIFTYGKQP 230
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 113/230 (49%), Gaps = 29/230 (12%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC-HDSDHGMKQFVSEIVSMGKLRHRNLV 396
Y NL +G G V + +A++K+ + ++ + EI + + RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 397 QLRGYCR-----RKGELLLVYDYMPNGSLDKIL----YSNTRPSLNWFQRFRIIKGVAFG 447
+ R + ++ +V D M L K+L SN +Q R G
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------G 140
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT---TNVVGTVG 504
L Y+H VLHRD+KP+N+LL+ + K+ DFGLAR+ D +D HT T V T
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD-HTGFLTEYVATRW 196
Query: 505 YLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE--LDLLDWVI 551
Y APE++ N +G T S D+++ G + E+ RP+ PG+ LD L+ ++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHIL 245
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 103/202 (50%), Gaps = 12/202 (5%)
Query: 339 KNLYKATKGGSGKV----YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
K L + KG G V Y + ++ +AVKK+ H ++ ++ F EI + L+H N
Sbjct: 16 KFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 395 LVQLRGYCRRKGE--LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLH 452
+V+ +G C G L L+ +++P GSL + L + + ++ + + + G+ YL
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKH-KERIDHIKLLQYTSQICKGMEYL- 133
Query: 453 EEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPEL 510
+ +HRD+ N+L++ + K+GDFGL ++ + G + + APE
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 511 LRNGRGTTSTDVYAFGVFMLEV 532
L + + ++DV++FGV + E+
Sbjct: 192 LTESKFSVASDVWSFGVVLYEL 213
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 104/199 (52%), Gaps = 9/199 (4%)
Query: 341 LYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRG 400
L K +G G VY+ + + +A+K+V +SD +++ + EI M + ++V+ G
Sbjct: 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYG 91
Query: 401 YCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVL 460
+ +L +V +Y GS+ I+ + +L + I++ GL YLH + +
Sbjct: 92 SYFKNTDLWIVMEYCGAGSVSDIIRLRNK-TLTEDEIATILQSTLKGLEYLHFMRK---I 147
Query: 461 HRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
HRDIK N+LL+ + KL DFG+A +L D V+GT ++APE+++
Sbjct: 148 HRDIKAGNILLNTEGHAKLADFGVAGQLTDXMA--KRNXVIGTPFWMAPEVIQEIGYNCV 205
Query: 520 TDVYAFGVFMLEVACGRRP 538
D+++ G+ +E+A G+ P
Sbjct: 206 ADIWSLGITAIEMAEGKPP 224
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 20/219 (9%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC--HDSDHGMKQFVSEIVSMGKLRHRNL 395
Y+ + K +G G+VY+ + ++ +A+K++ H+ + + E+ + +L+HRN+
Sbjct: 36 YRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNI 95
Query: 396 VQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF--RIIKGVAFGLLYLHE 453
++L+ L L+++Y N L K + N S+ + F ++I GV F H
Sbjct: 96 IELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNF----CH- 149
Query: 454 EWEQVVLHRDIKPANVLLDADLEG-----KLGDFGLARLYDHGNDLHTTNVVGTVGYLAP 508
+ LHRD+KP N+LL K+GDFGLAR + T ++ T+ Y P
Sbjct: 150 --SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-TLWYRPP 206
Query: 509 ELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
E+L R +TS D+++ E+ + P+ PG+ ++
Sbjct: 207 EILLGSRHYSTSVDIWSIACIWAEMLM-KTPLFPGDSEI 244
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 124/280 (44%), Gaps = 40/280 (14%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKV----CHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
G + V ++A+K++ C S M + + EI +M + H N+V
Sbjct: 21 GATAVVQAAYCAPKKEKVAIKRINLEKCQTS---MDELLKEIQAMSQCHHPNIVSYYTSF 77
Query: 403 RRKGELLLVYDYMPNGSLDKILY------SNTRPSLNWFQRFRIIKGVAFGLLYLHEEWE 456
K EL LV + GS+ I+ + L+ I++ V GL YLH+ +
Sbjct: 78 VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ 137
Query: 457 QVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNV----VGTVGYLAPELLR 512
+HRD+K N+LL D ++ DFG++ G D+ V VGT ++APE++
Sbjct: 138 ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME 194
Query: 513 NGRGTT-STDVYAFGVFMLEVACGRRPVQ---PGELDLLDWVIDYWQKGDVLDASDPRLE 568
RG D+++FG+ +E+A G P P ++ +L L P LE
Sbjct: 195 QVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML-----------TLQNDPPSLE 243
Query: 569 GIYVEEQM-----EIVLKLGLFCSHSNPDTRPSMRQVVQY 603
+++M + K+ C +P+ RP+ +++++
Sbjct: 244 TGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 283
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 122/271 (45%), Gaps = 17/271 (6%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R S + + + G G+V+ G + + ++A+K + + F+ E M KL+H
Sbjct: 8 RESLQLIKRLGNGQFGEVWMGTW-NGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDK 65
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LVQL + + +V +YM GSL L +L + VA G+ Y+
Sbjct: 66 LVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER- 123
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+HRD++ AN+L+ L K+ DFGLARL + + + APE G
Sbjct: 124 --MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYG 181
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
R T +DV++FG+ + E+ R PG + V++ ++G + P+ I + E
Sbjct: 182 RFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE--VLEQVERGYRMPC--PQDCPISLHE 237
Query: 575 QMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
M + C +P+ RP+ + +L+
Sbjct: 238 LM-------IHCWKKDPEERPTFEYLQSFLE 261
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 126/266 (47%), Gaps = 33/266 (12%)
Query: 358 PSSHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYM 415
P +AVK + D ++ + VSE+ M + +H+N++ L G C + G L ++ +Y
Sbjct: 64 PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 123
Query: 416 PNGSLDKILYSNTRPSLNW-FQRFRIIK-------------GVAFGLLYLHEEWEQVVLH 461
G+L + L + P + + + R+ + +A G+ YL Q +H
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIH 180
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDL-HTTNVVGTVGYLAPELLRNGRGTTST 520
RD+ NVL+ + K+ DFGLAR ++ + TTN V ++APE L + T +
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 521 DVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
DV++FGV M E+ G P PG ++ + ++G +D +Y+
Sbjct: 241 DVWSFGVLMWEIFTLGGSPY-PG--IPVEELFKLLKEGHRMDKPANCTNELYM------- 290
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLD 605
+ C H+ P RP+ +Q+V+ LD
Sbjct: 291 --MMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 23/262 (8%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDH--GMKQFV-SEIVSMGKLRHRNLVQLRGYC 402
KG VYR + E+A+K + + + GM Q V +E+ +L+H ++++L Y
Sbjct: 21 KGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYF 80
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRP-SLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ LV + NG +++ L + +P S N + F + + G+LYLH +LH
Sbjct: 81 EDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHF--MHQIITGMLYLHSHG---ILH 135
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTD 521
RD+ +N+LL ++ K+ DFGLA ++ H T + GT Y++PE+ +D
Sbjct: 136 RDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPEIATRSAHGLESD 194
Query: 522 VYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLK 581
V++ G + GR P D V + K + D P I ++ + +L+
Sbjct: 195 VWSLGCMFYTLLIGRPPFDT------DTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLLR 248
Query: 582 LGLFCSHSNPDTRPSMRQVVQY 603
NP R S+ V+ +
Sbjct: 249 -------RNPADRLSLSSVLDH 263
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 112/230 (48%), Gaps = 29/230 (12%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC-HDSDHGMKQFVSEIVSMGKLRHRNLV 396
Y NL +G G V + +A+KK+ + ++ + EI + RH N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 397 QLRGYCR-----RKGELLLVYDYMPNGSLDKIL----YSNTRPSLNWFQRFRIIKGVAFG 447
+ R + ++ +V D M L K+L SN +Q R G
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------G 138
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT---TNVVGTVG 504
L Y+H VLHRD+KP+N+LL+ + K+ DFGLAR+ D +D HT T V T
Sbjct: 139 LKYIHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHD-HTGFLTEYVATRW 194
Query: 505 YLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE--LDLLDWVI 551
Y APE++ N +G T S D+++ G + E+ RP+ PG+ LD L+ ++
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEM-LSNRPIFPGKHYLDQLNHIL 243
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 28/199 (14%)
Query: 342 YKATKGGSGKVYRGVLPSSHAEIAVKKVCHDS----DHGMKQFVSEIVSMGKLRHRNLVQ 397
Y T G+G++ +AVK + D+ G KQ EI + L H ++++
Sbjct: 52 YDPTNDGTGEM-----------VAVKALKADAGPQHRSGWKQ---EIDILRTLYHEHIIK 97
Query: 398 LRGYCRRKG--ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEW 455
+G C G L LV +Y+P GSL L R S+ Q + + G+ YLH
Sbjct: 98 YKGCCEDAGAASLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHA-- 152
Query: 456 EQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVG--TVGYLAPELLRN 513
Q +HRD+ NVLLD D K+GDFGLA+ G++ + G V + APE L+
Sbjct: 153 -QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKE 211
Query: 514 GRGTTSTDVYAFGVFMLEV 532
+ ++DV++FGV + E+
Sbjct: 212 YKFYYASDVWSFGVTLYEL 230
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 112/230 (48%), Gaps = 29/230 (12%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC-HDSDHGMKQFVSEIVSMGKLRHRNLV 396
Y NL +G G V + +A+KK+ + ++ + EI + + RH N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 397 QLRGYCR-----RKGELLLVYDYMPNGSLDKIL----YSNTRPSLNWFQRFRIIKGVAFG 447
+ R + ++ LV M L K+L SN +Q R G
Sbjct: 105 GINDIIRAPTIEQMKDVYLVTHLM-GADLYKLLKTQHLSNDHICYFLYQILR-------G 156
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT---TNVVGTVG 504
L Y+H VLHRD+KP+N+LL+ + K+ DFGLAR+ D +D HT T V T
Sbjct: 157 LKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHD-HTGFLTEYVATRW 212
Query: 505 YLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE--LDLLDWVI 551
Y APE++ N +G T S D+++ G + E+ RP+ PG+ LD L+ ++
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEM-LSNRPIFPGKHYLDQLNHIL 261
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 127/266 (47%), Gaps = 33/266 (12%)
Query: 358 PSSHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYM 415
P +AVK + D ++ + VSE+ M + +H+N++ L G C + G L ++ +Y
Sbjct: 64 PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 123
Query: 416 PNGSLDKILYSNTRPSLNW-FQRFRIIK-------------GVAFGLLYLHEEWEQVVLH 461
G+L + L + P + + + R+ + +A G+ YL Q +H
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIH 180
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDL-HTTNVVGTVGYLAPELLRNGRGTTST 520
RD+ NVL+ + K+ DFGLAR ++ + +TTN V ++APE L + T +
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 521 DVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
DV++FGV M E+ G P PG ++ + ++G +D +Y+
Sbjct: 241 DVWSFGVLMWEIFTLGGSPY-PG--IPVEELFKLLKEGHRMDKPANCTNELYM------- 290
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLD 605
+ C H+ P RP+ +Q+V+ LD
Sbjct: 291 --MMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 16/211 (7%)
Query: 334 HRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGK 389
H +Y+ + +G GKV ++ ++A+K KV SD + EI +
Sbjct: 11 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDM-QGRIEREISYLRL 69
Query: 390 LRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLL 449
LRH ++++L + K E+++V +Y N D I+ R ++ + R + + +
Sbjct: 70 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV---QRDKMSEQEARRFFQQIISAVE 126
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
Y H ++HRD+KP N+LLD L K+ DFGL+ + GN L T+ G+ Y APE
Sbjct: 127 YCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE 181
Query: 510 LLRNGR--GTTSTDVYAFGVFMLEVACGRRP 538
++ +G+ DV++ GV + + C R P
Sbjct: 182 VI-SGKLYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 112/230 (48%), Gaps = 29/230 (12%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC-HDSDHGMKQFVSEIVSMGKLRHRNLV 396
Y NL +G G V + +A+KK+ + ++ + EI + + RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 397 QLRGYCR-----RKGELLLVYDYMPNGSLDKIL----YSNTRPSLNWFQRFRIIKGVAFG 447
+ R + ++ +V D M L K+L SN +Q R G
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------G 140
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT---TNVVGTVG 504
L Y+H VLHRD+KP+N+LL+ + K+ DFGLAR+ D +D HT V T
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD-HTGFLXEXVATRW 196
Query: 505 YLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE--LDLLDWVI 551
Y APE++ N +G T S D+++ G + E+ RP+ PG+ LD L+ ++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHIL 245
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 112/230 (48%), Gaps = 29/230 (12%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC-HDSDHGMKQFVSEIVSMGKLRHRNLV 396
Y NL +G G V + +A+KK+ + ++ + EI + + RH N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 397 QLRGYCR-----RKGELLLVYDYMPNGSLDKIL----YSNTRPSLNWFQRFRIIKGVAFG 447
+ R + ++ +V D M L K+L SN +Q R G
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------G 141
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT---TNVVGTVG 504
L Y+H VLHRD+KP+N+LL+ + K+ DFGLAR+ D +D HT V T
Sbjct: 142 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD-HTGFLXEXVATRW 197
Query: 505 YLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE--LDLLDWVI 551
Y APE++ N +G T S D+++ G + E+ RP+ PG+ LD L+ ++
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHIL 246
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 126/266 (47%), Gaps = 33/266 (12%)
Query: 358 PSSHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYM 415
P +AVK + D ++ + VSE+ M + +H+N++ L G C + G L ++ +Y
Sbjct: 64 PKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 123
Query: 416 PNGSLDKILYSNTRPSLNW-FQRFRIIK-------------GVAFGLLYLHEEWEQVVLH 461
G+L + L + P + + + R+ + +A G+ YL Q +H
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIH 180
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDL-HTTNVVGTVGYLAPELLRNGRGTTST 520
RD+ NVL+ + K+ DFGLAR ++ + TTN V ++APE L + T +
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 521 DVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
DV++FGV M E+ G P PG ++ + ++G +D +Y+
Sbjct: 241 DVWSFGVLMWEIFTLGGSPY-PG--IPVEELFKLLKEGHRMDKPANCTNELYM------- 290
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLD 605
+ C H+ P RP+ +Q+V+ LD
Sbjct: 291 --MMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 16/211 (7%)
Query: 334 HRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGK 389
H +Y+ + +G GKV ++ ++A+K KV SD + EI +
Sbjct: 12 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDM-QGRIEREISYLRL 70
Query: 390 LRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLL 449
LRH ++++L + K E+++V +Y N D I+ R ++ + R + + +
Sbjct: 71 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV---QRDKMSEQEARRFFQQIISAVE 127
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
Y H ++HRD+KP N+LLD L K+ DFGL+ + GN L T+ G+ Y APE
Sbjct: 128 YCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE 182
Query: 510 LLRNGR--GTTSTDVYAFGVFMLEVACGRRP 538
++ +G+ DV++ GV + + C R P
Sbjct: 183 VI-SGKLYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 130/271 (47%), Gaps = 28/271 (10%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKV-CHDSDHGMKQFVSEIVSMGKLRHRNLV 396
+ L + KG G+V++G+ + +A+K + +++ ++ EI + + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 397 QLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWE 456
+ G + +L ++ +Y+ GS +L + + FQ ++K + GL YLH E +
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAG---PFDEFQIATMLKEILKGLDYLHSEKK 141
Query: 457 QVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTTNVVGTVGYLAPELLRNGR 515
+HRDIK ANVLL + KL DFG+A +L D + VGT ++APE+++
Sbjct: 142 ---IHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNTFVGTPFWMAPEVIQQSA 196
Query: 516 GTTSTDVYAFGVFMLEVACGRRP---VQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYV 572
+ D+++ G+ +E+A G P + P + L + + P L G +
Sbjct: 197 YDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFL-----------IPKNNPPTLVGDFT 245
Query: 573 EEQMEIVLKLGLFCSHSNPDTRPSMRQVVQY 603
+ E + C + +P RP+ ++++++
Sbjct: 246 KSFKEFIDA----CLNKDPSFRPTAKELLKH 272
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 16/211 (7%)
Query: 334 HRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGK 389
H +Y+ + +G GKV ++ ++A+K KV SD + EI +
Sbjct: 6 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDM-QGRIEREISYLRL 64
Query: 390 LRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLL 449
LRH ++++L + K E+++V +Y N D I+ R ++ + R + + +
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV---QRDKMSEQEARRFFQQIISAVE 121
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
Y H ++HRD+KP N+LLD L K+ DFGL+ + GN L T+ G+ Y APE
Sbjct: 122 YCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE 176
Query: 510 LLRNGR--GTTSTDVYAFGVFMLEVACGRRP 538
++ +G+ DV++ GV + + C R P
Sbjct: 177 VI-SGKLYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 126/266 (47%), Gaps = 33/266 (12%)
Query: 358 PSSHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYM 415
P +AVK + D ++ + VSE+ M + +H+N++ L G C + G L ++ +Y
Sbjct: 64 PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYA 123
Query: 416 PNGSLDKILYSNTRPSLNW-FQRFRIIK-------------GVAFGLLYLHEEWEQVVLH 461
G+L + L + P + + + R+ + +A G+ YL Q +H
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIH 180
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDL-HTTNVVGTVGYLAPELLRNGRGTTST 520
RD+ NVL+ + K+ DFGLAR ++ + TTN V ++APE L + T +
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 521 DVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
DV++FGV M E+ G P PG ++ + ++G +D +Y+
Sbjct: 241 DVWSFGVLMWEIFTLGGSPY-PG--IPVEELFKLLKEGHRMDKPANCTNELYM------- 290
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLD 605
+ C H+ P RP+ +Q+V+ LD
Sbjct: 291 --MMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKV-----CHDSDHGMKQFVSEIVSMGKLRH 392
Y+ L +G VY+ +++ +A+KK+ D + + EI + +L H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 393 RNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLH 452
N++ L K + LV+D+M L+ I+ N+ + ++ + GL YLH
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTLQ-GLEYLH 129
Query: 453 EEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLR 512
+ W +LHRD+KP N+LLD + KL DFGLA+ + N + VV T Y APELL
Sbjct: 130 QHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRWYRAPELLF 185
Query: 513 NGRGT-TSTDVYAFGVFMLEVACGRRPVQPGELDL 546
R D++A G + E+ R P PG+ DL
Sbjct: 186 GARMYGVGVDMWAVGCILAELLL-RVPFLPGDSDL 219
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 5/170 (2%)
Query: 363 EIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDK 422
++A+K + + + F+ E M KL H LVQL G C + + LV+++M +G L
Sbjct: 36 KVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 94
Query: 423 ILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDF 482
L + R + V G+ YL E V+HRD+ N L+ + K+ DF
Sbjct: 95 YLRTQ-RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDF 150
Query: 483 GLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEV 532
G+ R +T V + +PE+ R ++ +DV++FGV M EV
Sbjct: 151 GMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 200
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 16/211 (7%)
Query: 334 HRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGK 389
H +Y+ + +G GKV ++ ++A+K KV SD + EI +
Sbjct: 2 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDM-QGRIEREISYLRL 60
Query: 390 LRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLL 449
LRH ++++L + K E+++V +Y N D I+ R ++ + R + + +
Sbjct: 61 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV---QRDKMSEQEARRFFQQIISAVE 117
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
Y H ++HRD+KP N+LLD L K+ DFGL+ + GN L T+ G+ Y APE
Sbjct: 118 YCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE 172
Query: 510 LLRNGR--GTTSTDVYAFGVFMLEVACGRRP 538
++ +G+ DV++ GV + + C R P
Sbjct: 173 VI-SGKLYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 126/266 (47%), Gaps = 33/266 (12%)
Query: 358 PSSHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYM 415
P +AVK + D ++ + VSE+ M + +H+N++ L G C + G L ++ +Y
Sbjct: 53 PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 112
Query: 416 PNGSLDKILYSNTRPSLNW-FQRFRIIK-------------GVAFGLLYLHEEWEQVVLH 461
G+L + L + P + + + R+ + +A G+ YL Q +H
Sbjct: 113 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIH 169
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDL-HTTNVVGTVGYLAPELLRNGRGTTST 520
RD+ NVL+ + K+ DFGLAR ++ + TTN V ++APE L + T +
Sbjct: 170 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 229
Query: 521 DVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
DV++FGV M E+ G P PG ++ + ++G +D +Y+
Sbjct: 230 DVWSFGVLMWEIFTLGGSPY-PG--IPVEELFKLLKEGHRMDKPANCTNELYM------- 279
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLD 605
+ C H+ P RP+ +Q+V+ LD
Sbjct: 280 --MMRDCWHAVPSQRPTFKQLVEDLD 303
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 122/266 (45%), Gaps = 33/266 (12%)
Query: 358 PSSHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYM 415
P +AVK + D ++ + VSE+ M + +H+N++ L G C + G L ++ +Y
Sbjct: 64 PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 123
Query: 416 PNGSLDKILYSNTRP--------------SLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
G+L + L + P + + +A G+ YL Q +H
Sbjct: 124 SKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIH 180
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDL-HTTNVVGTVGYLAPELLRNGRGTTST 520
RD+ NVL+ + K+ DFGLAR ++ + TTN V ++APE L + T +
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 521 DVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
DV++FGV M E+ G P PG ++ + ++G +D +Y+
Sbjct: 241 DVWSFGVLMWEIFTLGGSPY-PG--IPVEELFKLLKEGHRMDKPANCTNELYM------- 290
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLD 605
+ C H+ P RP+ +Q+V+ LD
Sbjct: 291 --MMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 108/227 (47%), Gaps = 33/227 (14%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVS-EIVSMGKLR 391
P SY + G G VY+ L S +A+KKV D K+F + E+ M KL
Sbjct: 51 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 105
Query: 392 HRNLVQLRGYCRRKGE------LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVA 445
H N+V+LR + GE L LV DY+P + +Y R + R + V
Sbjct: 106 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVAR----HYSRAKQTLPVI 156
Query: 446 FGLLYLHEEWEQV-------VLHRDIKPANVLLDADLEG-KLGDFGLARLYDHGNDLHTT 497
+ LY+++ + + + HRDIKP N+LLD D KL DFG A+ G
Sbjct: 157 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NV 214
Query: 498 NVVGTVGYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE 543
+ + + Y APEL+ T+S DV++ G + E+ G +P+ PG+
Sbjct: 215 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGD 260
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 126/266 (47%), Gaps = 33/266 (12%)
Query: 358 PSSHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYM 415
P +AVK + D ++ + VSE+ M + +H+N++ L G C + G L ++ +Y
Sbjct: 110 PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 169
Query: 416 PNGSLDKILYSNTRPSLNW-FQRFRIIK-------------GVAFGLLYLHEEWEQVVLH 461
G+L + L + P + + + R+ + +A G+ YL Q +H
Sbjct: 170 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIH 226
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDL-HTTNVVGTVGYLAPELLRNGRGTTST 520
RD+ NVL+ + K+ DFGLAR ++ + TTN V ++APE L + T +
Sbjct: 227 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 286
Query: 521 DVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
DV++FGV M E+ G P PG ++ + ++G +D +Y+
Sbjct: 287 DVWSFGVLMWEIFTLGGSPY-PG--IPVEELFKLLKEGHRMDKPANCTNELYM------- 336
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLD 605
+ C H+ P RP+ +Q+V+ LD
Sbjct: 337 --MMRDCWHAVPSQRPTFKQLVEDLD 360
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 119/260 (45%), Gaps = 26/260 (10%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGMK-QFVSEIVSMGKLRHRN 394
Y+ L K +G G+V++ + ++A+KKV +++ G + EI + L+H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 395 LVQLRGYCRRK--------GELLLVYDYMPN---GSLDKILYSNTRPSLNWFQRFRIIKG 443
+V L CR K G + LV+D+ + G L +L T + R+++
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK-----RVMQM 133
Query: 444 VAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTT---NVV 500
+ GL Y+H +LHRD+K ANVL+ D KL DFGLAR + + N V
Sbjct: 134 LLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 501 GTVGYLAPELLRNGRGT-TSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDV 559
T+ Y PELL R D++ G M E+ R P+ G + + G +
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW-TRSPIMQGNTEQHQLALISQLCGSI 249
Query: 560 LDASDPRLEGIYVEEQMEIV 579
P ++ + E++E+V
Sbjct: 250 TPEVWPNVDNYELYEKLELV 269
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 5/170 (2%)
Query: 363 EIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDK 422
++A+K + + + F+ E M KL H LVQL G C + + LV+++M +G L
Sbjct: 33 KVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 91
Query: 423 ILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDF 482
L + R + V G+ YL E V+HRD+ N L+ + K+ DF
Sbjct: 92 YLRTQ-RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDF 147
Query: 483 GLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEV 532
G+ R +T V + +PE+ R ++ +DV++FGV M EV
Sbjct: 148 GMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 197
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 126/266 (47%), Gaps = 33/266 (12%)
Query: 358 PSSHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYM 415
P +AVK + D ++ + VSE+ M + +H+N++ L G C + G L ++ +Y
Sbjct: 56 PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 115
Query: 416 PNGSLDKILYSNTRPSLNW-FQRFRIIK-------------GVAFGLLYLHEEWEQVVLH 461
G+L + L + P + + + R+ + +A G+ YL Q +H
Sbjct: 116 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIH 172
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDL-HTTNVVGTVGYLAPELLRNGRGTTST 520
RD+ NVL+ + K+ DFGLAR ++ + TTN V ++APE L + T +
Sbjct: 173 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 232
Query: 521 DVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
DV++FGV M E+ G P PG ++ + ++G +D +Y+
Sbjct: 233 DVWSFGVLMWEIFTLGGSPY-PG--IPVEELFKLLKEGHRMDKPANCTNELYM------- 282
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLD 605
+ C H+ P RP+ +Q+V+ LD
Sbjct: 283 --MMRDCWHAVPSQRPTFKQLVEDLD 306
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 133/277 (48%), Gaps = 45/277 (16%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC---HDSDHGMKQFVSEIVSMGKLR-H 392
Y+ + K KG G V++ + + +AVKK+ +S + F EI+ + +L H
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF-REIMILTELSGH 68
Query: 393 RNLVQLRGYCRRKGE--LLLVYDYMPNGSLDKILYSNT-RPSLNWFQRFRIIKGVAFGLL 449
N+V L R + + LV+DYM L ++ +N P + +++IK +
Sbjct: 69 ENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRANILEPVHKQYVVYQLIKVIK---- 123
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT------------- 496
YLH +LHRD+KP+N+LL+A+ K+ DFGL+R + + +
Sbjct: 124 YLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENF 180
Query: 497 -------TNVVGTVGYLAPE-LLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPG-----E 543
T+ V T Y APE LL + + T D+++ G + E+ CG +P+ PG +
Sbjct: 181 DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPIFPGSSTMNQ 239
Query: 544 LDLLDWVIDYWQKGDVLDASDPRLEGIY--VEEQMEI 578
L+ + VID+ DV P + + ++E++EI
Sbjct: 240 LERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEI 276
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 128/270 (47%), Gaps = 31/270 (11%)
Query: 347 GGSGKVYRGVLPSSHAEIAVK--KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRR 404
G G VY+G H ++AVK V + ++ F +E+ + K RH N++ GY
Sbjct: 35 GSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 90
Query: 405 KGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRII---KGVAFGLLYLHEEWEQVVLH 461
+L +V + SL Y + S F+ ++I + A G+ YLH + ++H
Sbjct: 91 APQLAIVTQWCEGSSL----YHHLHASETKFEMKKLIDIARQTARGMDYLHA---KSIIH 143
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT-TNVVGTVGYLAPELLRNGRG---T 517
RD+K N+ L D K+GDFGLA + H + G++ ++APE++R +
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 518 TSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIY--VEEQ 575
+DVYAFG+ + E+ G+ P ++ D +I+ +G + P L + ++
Sbjct: 204 FQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIEMVGRGSL----SPDLSKVRSNCPKR 257
Query: 576 MEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
M+ +L C D RPS +++ ++
Sbjct: 258 MK---RLMAECLKKKRDERPSFPRILAEIE 284
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 108/227 (47%), Gaps = 33/227 (14%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVS-EIVSMGKLR 391
P SY + G G VY+ L S +A+KKV D K+F + E+ M KL
Sbjct: 45 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 99
Query: 392 HRNLVQLRGYCRRKGE------LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVA 445
H N+V+LR + GE L LV DY+P + +Y R + R + V
Sbjct: 100 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVAR----HYSRAKQTLPVI 150
Query: 446 FGLLYLHEEWEQV-------VLHRDIKPANVLLDADLEG-KLGDFGLARLYDHGNDLHTT 497
+ LY+++ + + + HRDIKP N+LLD D KL DFG A+ G
Sbjct: 151 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NV 208
Query: 498 NVVGTVGYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE 543
+ + + Y APEL+ T+S DV++ G + E+ G +P+ PG+
Sbjct: 209 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGD 254
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 119/276 (43%), Gaps = 37/276 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHG-------MKQFVSEIVSMGKLRHRNLVQL 398
KGG G V++G L + +A+K + G ++F E+ M L H N+V+L
Sbjct: 29 KGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKL 88
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
G +V +++P G L L P + W + R++ +A G+ Y+ + +
Sbjct: 89 YGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLDIALGIEYMQNQNPPI 145
Query: 459 VLHRDIKPANVLL-----DADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL-- 511
V HRD++ N+ L +A + K+ DFG ++ H + ++G ++APE +
Sbjct: 146 V-HRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHS----VSGLLGNFQWMAPETIGA 200
Query: 512 RNGRGTTSTDVYAFGVFMLEVACGRRPVQP---GELDLLDWVIDYWQKGDVLDASDPRLE 568
T D Y+F + + + G P G++ ++ + + + + + PRL
Sbjct: 201 EEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLR 260
Query: 569 GIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYL 604
+ +E C +P RP +V+ L
Sbjct: 261 NV-IE-----------LCWSGDPKKRPHFSYIVKEL 284
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 108/227 (47%), Gaps = 33/227 (14%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVS-EIVSMGKLR 391
P SY + G G VY+ L S +A+KKV D K+F + E+ M KL
Sbjct: 51 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 105
Query: 392 HRNLVQLRGYCRRKGE------LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVA 445
H N+V+LR + GE L LV DY+P + +Y R + R + V
Sbjct: 106 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVAR----HYSRAKQTLPVI 156
Query: 446 FGLLYLHEEWEQV-------VLHRDIKPANVLLDADLEG-KLGDFGLARLYDHGNDLHTT 497
+ LY+++ + + + HRDIKP N+LLD D KL DFG A+ G
Sbjct: 157 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NV 214
Query: 498 NVVGTVGYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE 543
+ + + Y APEL+ T+S DV++ G + E+ G +P+ PG+
Sbjct: 215 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGD 260
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 12/182 (6%)
Query: 363 EIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDK 422
++A+K + + +F+ E M L H LVQL G C ++ + ++ +YM NG L
Sbjct: 50 DVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 108
Query: 423 ILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDF 482
L R Q + K V + YL + LHRD+ N L++ K+ DF
Sbjct: 109 YL-REMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDF 164
Query: 483 GLARLYDHGNDLHTTNVVGT---VGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRP 538
GL+R + D T+ VG+ V + PE+L + ++ +D++AFGV M E+ + G+ P
Sbjct: 165 GLSR---YVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 221
Query: 539 VQ 540
+
Sbjct: 222 YE 223
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 118/279 (42%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 23 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 82
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G + K L L+ F R I +A L Y H + V
Sbjct: 83 HDATRVYLILEYAPRGEVYKEL-----QKLSKFDEQRTATYITELANALSYCHS---KRV 134
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ DFG + H T + GT+ YL PE++
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 191
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + + +++ ++ + P + + +
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL 245
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
LK NP RP +R+V+++ P I NSS
Sbjct: 246 LK-------HNPSQRPMLREVLEH-------PWITANSS 270
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 126/266 (47%), Gaps = 33/266 (12%)
Query: 358 PSSHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYM 415
P +AVK + D ++ + VSE+ M + +H+N++ L G C + G L ++ +Y
Sbjct: 51 PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 110
Query: 416 PNGSLDKILYSNTRPSLNW-FQRFRIIK-------------GVAFGLLYLHEEWEQVVLH 461
G+L + L + P + + + R+ + +A G+ YL Q +H
Sbjct: 111 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIH 167
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDL-HTTNVVGTVGYLAPELLRNGRGTTST 520
RD+ NVL+ + K+ DFGLAR ++ + TTN V ++APE L + T +
Sbjct: 168 RDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 227
Query: 521 DVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
DV++FGV M E+ G P PG ++ + ++G +D +Y+
Sbjct: 228 DVWSFGVLMWEIFTLGGSPY-PG--IPVEELFKLLKEGHRMDKPANCTNELYM------- 277
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLD 605
+ C H+ P RP+ +Q+V+ LD
Sbjct: 278 --MMRDCWHAVPSQRPTFKQLVEDLD 301
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 5/170 (2%)
Query: 363 EIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDK 422
++A+K + + + F+ E M KL H LVQL G C + + LV+++M +G L
Sbjct: 31 KVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 89
Query: 423 ILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDF 482
L + R + V G+ YL E V+HRD+ N L+ + K+ DF
Sbjct: 90 YLRTQ-RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDF 145
Query: 483 GLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEV 532
G+ R +T V + +PE+ R ++ +DV++FGV M EV
Sbjct: 146 GMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 195
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 126/266 (47%), Gaps = 33/266 (12%)
Query: 358 PSSHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYM 415
P +AVK + D ++ + VSE+ M + +H+N++ L G C + G L ++ +Y
Sbjct: 64 PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYA 123
Query: 416 PNGSLDKILYSNTRPSLNW-FQRFRIIK-------------GVAFGLLYLHEEWEQVVLH 461
G+L + L + P + + + R+ + +A G+ YL Q +H
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIH 180
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDL-HTTNVVGTVGYLAPELLRNGRGTTST 520
RD+ NVL+ + K+ DFGLAR ++ + TTN V ++APE L + T +
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 521 DVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
DV++FGV M E+ G P PG ++ + ++G +D +Y+
Sbjct: 241 DVWSFGVLMWEIFTLGGSPY-PG--IPVEELFKLLKEGHRMDKPANCTNELYM------- 290
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLD 605
+ C H+ P RP+ +Q+V+ LD
Sbjct: 291 --MMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 108/227 (47%), Gaps = 33/227 (14%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVS-EIVSMGKLR 391
P SY + G G VY+ L S +A+KKV D K+F + E+ M KL
Sbjct: 29 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 83
Query: 392 HRNLVQLRGYCRRKGE------LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVA 445
H N+V+LR + GE L LV DY+P + +Y R + R + V
Sbjct: 84 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVAR----HYSRAKQTLPVI 134
Query: 446 FGLLYLHEEWEQV-------VLHRDIKPANVLLDADLEG-KLGDFGLARLYDHGNDLHTT 497
+ LY+++ + + + HRDIKP N+LLD D KL DFG A+ G
Sbjct: 135 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NV 192
Query: 498 NVVGTVGYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE 543
+ + + Y APEL+ T+S DV++ G + E+ G +P+ PG+
Sbjct: 193 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGD 238
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 108/227 (47%), Gaps = 33/227 (14%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVS-EIVSMGKLR 391
P SY + G G VY+ L S +A+KKV D K+F + E+ M KL
Sbjct: 22 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 76
Query: 392 HRNLVQLRGYCRRKGE------LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVA 445
H N+V+LR + GE L LV DY+P + +Y R + R + V
Sbjct: 77 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVAR----HYSRAKQTLPVI 127
Query: 446 FGLLYLHEEWEQV-------VLHRDIKPANVLLDADLEG-KLGDFGLARLYDHGNDLHTT 497
+ LY+++ + + + HRDIKP N+LLD D KL DFG A+ G
Sbjct: 128 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NV 185
Query: 498 NVVGTVGYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE 543
+ + + Y APEL+ T+S DV++ G + E+ G +P+ PG+
Sbjct: 186 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGD 231
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 108/227 (47%), Gaps = 33/227 (14%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVS-EIVSMGKLR 391
P SY + G G VY+ L S +A+KKV D K+F + E+ M KL
Sbjct: 96 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 150
Query: 392 HRNLVQLRGYCRRKGE------LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVA 445
H N+V+LR + GE L LV DY+P + +Y R + R + V
Sbjct: 151 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVAR----HYSRAKQTLPVI 201
Query: 446 FGLLYLHEEWEQV-------VLHRDIKPANVLLDADLEG-KLGDFGLARLYDHGNDLHTT 497
+ LY+++ + + + HRDIKP N+LLD D KL DFG A+ G
Sbjct: 202 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NV 259
Query: 498 NVVGTVGYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE 543
+ + + Y APEL+ T+S DV++ G + E+ G +P+ PG+
Sbjct: 260 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGD 305
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 108/227 (47%), Gaps = 33/227 (14%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVS-EIVSMGKLR 391
P SY + G G VY+ L S +A+KKV D K+F + E+ M KL
Sbjct: 29 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 83
Query: 392 HRNLVQLRGYCRRKGE------LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVA 445
H N+V+LR + GE L LV DY+P + +Y R + R + V
Sbjct: 84 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVAR----HYSRAKQTLPVI 134
Query: 446 FGLLYLHEEWEQV-------VLHRDIKPANVLLDADLEG-KLGDFGLARLYDHGNDLHTT 497
+ LY+++ + + + HRDIKP N+LLD D KL DFG A+ G
Sbjct: 135 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NV 192
Query: 498 NVVGTVGYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE 543
+ + + Y APEL+ T+S DV++ G + E+ G +P+ PG+
Sbjct: 193 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGD 238
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 108/227 (47%), Gaps = 33/227 (14%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVS-EIVSMGKLR 391
P SY + G G VY+ L S +A+KKV D K+F + E+ M KL
Sbjct: 36 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 90
Query: 392 HRNLVQLRGYCRRKGE------LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVA 445
H N+V+LR + GE L LV DY+P + +Y R + R + V
Sbjct: 91 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVAR----HYSRAKQTLPVI 141
Query: 446 FGLLYLHEEWEQV-------VLHRDIKPANVLLDADLEG-KLGDFGLARLYDHGNDLHTT 497
+ LY+++ + + + HRDIKP N+LLD D KL DFG A+ G
Sbjct: 142 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NV 199
Query: 498 NVVGTVGYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE 543
+ + + Y APEL+ T+S DV++ G + E+ G +P+ PG+
Sbjct: 200 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGD 245
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 108/227 (47%), Gaps = 33/227 (14%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVS-EIVSMGKLR 391
P SY + G G VY+ L S +A+KKV D K+F + E+ M KL
Sbjct: 25 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 79
Query: 392 HRNLVQLRGYCRRKGE------LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVA 445
H N+V+LR + GE L LV DY+P + +Y R + R + V
Sbjct: 80 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVAR----HYSRAKQTLPVI 130
Query: 446 FGLLYLHEEWEQV-------VLHRDIKPANVLLDADLEG-KLGDFGLARLYDHGNDLHTT 497
+ LY+++ + + + HRDIKP N+LLD D KL DFG A+ G
Sbjct: 131 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NV 188
Query: 498 NVVGTVGYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE 543
+ + + Y APEL+ T+S DV++ G + E+ G +P+ PG+
Sbjct: 189 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGD 234
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 108/227 (47%), Gaps = 33/227 (14%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVS-EIVSMGKLR 391
P SY + G G VY+ L S +A+KKV D K+F + E+ M KL
Sbjct: 53 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 107
Query: 392 HRNLVQLRGYCRRKGE------LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVA 445
H N+V+LR + GE L LV DY+P + +Y R + R + V
Sbjct: 108 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVAR----HYSRAKQTLPVI 158
Query: 446 FGLLYLHEEWEQV-------VLHRDIKPANVLLDADLEG-KLGDFGLARLYDHGNDLHTT 497
+ LY+++ + + + HRDIKP N+LLD D KL DFG A+ G
Sbjct: 159 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NV 216
Query: 498 NVVGTVGYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE 543
+ + + Y APEL+ T+S DV++ G + E+ G +P+ PG+
Sbjct: 217 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGD 262
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 108/227 (47%), Gaps = 33/227 (14%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVS-EIVSMGKLR 391
P SY + G G VY+ L S +A+KKV D K+F + E+ M KL
Sbjct: 30 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 84
Query: 392 HRNLVQLRGYCRRKGE------LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVA 445
H N+V+LR + GE L LV DY+P + +Y R + R + V
Sbjct: 85 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVAR----HYSRAKQTLPVI 135
Query: 446 FGLLYLHEEWEQV-------VLHRDIKPANVLLDADLEG-KLGDFGLARLYDHGNDLHTT 497
+ LY+++ + + + HRDIKP N+LLD D KL DFG A+ G
Sbjct: 136 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NV 193
Query: 498 NVVGTVGYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE 543
+ + + Y APEL+ T+S DV++ G + E+ G +P+ PG+
Sbjct: 194 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGD 239
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 108/227 (47%), Gaps = 33/227 (14%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVS-EIVSMGKLR 391
P SY + G G VY+ L S +A+KKV D K+F + E+ M KL
Sbjct: 55 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 109
Query: 392 HRNLVQLRGYCRRKGE------LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVA 445
H N+V+LR + GE L LV DY+P + +Y R + R + V
Sbjct: 110 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVAR----HYSRAKQTLPVI 160
Query: 446 FGLLYLHEEWEQV-------VLHRDIKPANVLLDADLEG-KLGDFGLARLYDHGNDLHTT 497
+ LY+++ + + + HRDIKP N+LLD D KL DFG A+ G
Sbjct: 161 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NV 218
Query: 498 NVVGTVGYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE 543
+ + + Y APEL+ T+S DV++ G + E+ G +P+ PG+
Sbjct: 219 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGD 264
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 119/276 (43%), Gaps = 37/276 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHG-------MKQFVSEIVSMGKLRHRNLVQL 398
KGG G V++G L + +A+K + G ++F E+ M L H N+V+L
Sbjct: 29 KGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKL 88
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
G +V +++P G L L P + W + R++ +A G+ Y+ + +
Sbjct: 89 YGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLDIALGIEYMQNQNPPI 145
Query: 459 VLHRDIKPANVLL-----DADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL-- 511
V HRD++ N+ L +A + K+ DF L++ H + ++G ++APE +
Sbjct: 146 V-HRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHS----VSGLLGNFQWMAPETIGA 200
Query: 512 RNGRGTTSTDVYAFGVFMLEVACGRRPVQP---GELDLLDWVIDYWQKGDVLDASDPRLE 568
T D Y+F + + + G P G++ ++ + + + + + PRL
Sbjct: 201 EEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLR 260
Query: 569 GIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYL 604
+ +E C +P RP +V+ L
Sbjct: 261 NV-IE-----------LCWSGDPKKRPHFSYIVKEL 284
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 12/182 (6%)
Query: 363 EIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDK 422
++A+K + + +F+ E M L H LVQL G C ++ + ++ +YM NG L
Sbjct: 34 DVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 92
Query: 423 ILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDF 482
L R Q + K V + YL + LHRD+ N L++ K+ DF
Sbjct: 93 YL-REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDF 148
Query: 483 GLARLYDHGNDLHTTNVVGT---VGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRP 538
GL+R + D T+ VG+ V + PE+L + ++ +D++AFGV M E+ + G+ P
Sbjct: 149 GLSR---YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 205
Query: 539 VQ 540
+
Sbjct: 206 YE 207
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 12/182 (6%)
Query: 363 EIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDK 422
++A+K + + +F+ E M L H LVQL G C ++ + ++ +YM NG L
Sbjct: 50 DVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 108
Query: 423 ILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDF 482
L R Q + K V + YL + LHRD+ N L++ K+ DF
Sbjct: 109 YL-REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDF 164
Query: 483 GLARLYDHGNDLHTTNVVGT---VGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRP 538
GL+R + D T+ VG+ V + PE+L + ++ +D++AFGV M E+ + G+ P
Sbjct: 165 GLSR---YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 221
Query: 539 VQ 540
+
Sbjct: 222 YE 223
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 108/227 (47%), Gaps = 33/227 (14%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVS-EIVSMGKLR 391
P SY + G G VY+ L S +A+KKV D K+F + E+ M KL
Sbjct: 18 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 72
Query: 392 HRNLVQLRGYCRRKGE------LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVA 445
H N+V+LR + GE L LV DY+P + +Y R + R + V
Sbjct: 73 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVAR----HYSRAKQTLPVI 123
Query: 446 FGLLYLHEEWEQV-------VLHRDIKPANVLLDADLEG-KLGDFGLARLYDHGNDLHTT 497
+ LY+++ + + + HRDIKP N+LLD D KL DFG A+ G
Sbjct: 124 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NV 181
Query: 498 NVVGTVGYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE 543
+ + + Y APEL+ T+S DV++ G + E+ G +P+ PG+
Sbjct: 182 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGD 227
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 108/227 (47%), Gaps = 33/227 (14%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVS-EIVSMGKLR 391
P SY + G G VY+ L S +A+KKV D K+F + E+ M KL
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 71
Query: 392 HRNLVQLRGYCRRKGE------LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVA 445
H N+V+LR + GE L LV DY+P + +Y R + R + V
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVAR----HYSRAKQTLPVI 122
Query: 446 FGLLYLHEEWEQV-------VLHRDIKPANVLLDADLEG-KLGDFGLARLYDHGNDLHTT 497
+ LY+++ + + + HRDIKP N+LLD D KL DFG A+ G
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NV 180
Query: 498 NVVGTVGYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE 543
+ + + Y APEL+ T+S DV++ G + E+ G +P+ PG+
Sbjct: 181 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGD 226
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 108/227 (47%), Gaps = 33/227 (14%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVS-EIVSMGKLR 391
P SY + G G VY+ L S +A+KKV D K+F + E+ M KL
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 71
Query: 392 HRNLVQLRGYCRRKGE------LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVA 445
H N+V+LR + GE L LV DY+P + +Y R + R + V
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVAR----HYSRAKQTLPVI 122
Query: 446 FGLLYLHEEWEQV-------VLHRDIKPANVLLDADLEG-KLGDFGLARLYDHGNDLHTT 497
+ LY+++ + + + HRDIKP N+LLD D KL DFG A+ G
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NV 180
Query: 498 NVVGTVGYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE 543
+ + + Y APEL+ T+S DV++ G + E+ G +P+ PG+
Sbjct: 181 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGD 226
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 125/271 (46%), Gaps = 27/271 (9%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R S K K G G+V+ + H ++AVK + S ++ F++E M L+H
Sbjct: 181 RESLKLEKKLGAGQFGEVWMATY-NKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDK 238
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L K + ++ ++M GSL L S+ + +A G+ ++ +
Sbjct: 239 LVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ- 296
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+ +HRD++ AN+L+ A L K+ DFGLAR+ + + APE + G
Sbjct: 297 --RNYIHRDLRAANILVSASLVCKIADFGLARV----------GAKFPIKWTAPEAINFG 344
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEE 574
T +DV++FG+ ++E+ R PG + VI ++G + PR E EE
Sbjct: 345 SFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--PEVIRALERGYRM----PRPENC-PEE 397
Query: 575 QMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
I+++ C + P+ RP+ + LD
Sbjct: 398 LYNIMMR----CWKNRPEERPTFEYIQSVLD 424
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 108/227 (47%), Gaps = 33/227 (14%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVS-EIVSMGKLR 391
P SY + G G VY+ L S +A+KKV D K+F + E+ M KL
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 71
Query: 392 HRNLVQLRGYCRRKGE------LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVA 445
H N+V+LR + GE L LV DY+P + +Y R + R + V
Sbjct: 72 HCNIVRLRYFFYSSGEKKDVVYLNLVLDYVP-----ETVYRVAR----HYSRAKQTLPVI 122
Query: 446 FGLLYLHEEWEQV-------VLHRDIKPANVLLDADLEG-KLGDFGLARLYDHGNDLHTT 497
+ LY+++ + + + HRDIKP N+LLD D KL DFG A+ G
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NV 180
Query: 498 NVVGTVGYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE 543
+ + + Y APEL+ T+S DV++ G + E+ G +P+ PG+
Sbjct: 181 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGD 226
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 12/182 (6%)
Query: 363 EIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDK 422
++A+K + + +F+ E M L H LVQL G C ++ + ++ +YM NG L
Sbjct: 35 DVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 93
Query: 423 ILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDF 482
L R Q + K V + YL + LHRD+ N L++ K+ DF
Sbjct: 94 YL-REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDF 149
Query: 483 GLARLYDHGNDLHTTNVVGT---VGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRP 538
GL+R + D T+ VG+ V + PE+L + ++ +D++AFGV M E+ + G+ P
Sbjct: 150 GLSR---YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 206
Query: 539 VQ 540
+
Sbjct: 207 YE 208
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 108/227 (47%), Gaps = 33/227 (14%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVS-EIVSMGKLR 391
P SY + G G VY+ L S +A+KKV D K+F + E+ M KL
Sbjct: 21 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 75
Query: 392 HRNLVQLRGYCRRKGE------LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVA 445
H N+V+LR + GE L LV DY+P + +Y R + R + V
Sbjct: 76 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVAR----HYSRAKQTLPVI 126
Query: 446 FGLLYLHEEWEQV-------VLHRDIKPANVLLDADLEG-KLGDFGLARLYDHGNDLHTT 497
+ LY+++ + + + HRDIKP N+LLD D KL DFG A+ G
Sbjct: 127 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NV 184
Query: 498 NVVGTVGYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE 543
+ + + Y APEL+ T+S DV++ G + E+ G +P+ PG+
Sbjct: 185 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGD 230
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 12/182 (6%)
Query: 363 EIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDK 422
++A+K + + +F+ E M L H LVQL G C ++ + ++ +YM NG L
Sbjct: 30 DVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 88
Query: 423 ILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDF 482
L R Q + K V + YL + LHRD+ N L++ K+ DF
Sbjct: 89 YL-REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDF 144
Query: 483 GLARLYDHGNDLHTTNVVGT---VGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRP 538
GL+R + D T+ VG+ V + PE+L + ++ +D++AFGV M E+ + G+ P
Sbjct: 145 GLSR---YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 201
Query: 539 VQ 540
+
Sbjct: 202 YE 203
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 128/291 (43%), Gaps = 34/291 (11%)
Query: 341 LYKATKGGSGKVYRG-----VLPSSHAEIAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRN 394
L + +G G VY G + + +AVK V + + +F++E M +
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYS--------NTRPSLNWFQRFRIIKGVAF 446
+V+L G + L+V + M +G L L S RP + ++ +A
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 447 GLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGY 505
G+ YL+ + +HRD+ N ++ D K+GDFG+ R +Y+ + V +
Sbjct: 142 GMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRW 198
Query: 506 LAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQP-GELDLLDWVIDYWQKGDVLDAS 563
+APE L++G TTS+D+++FGV + E+ + +P Q +L +V+D G LD
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD----GGYLDQP 254
Query: 564 DPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIP 614
D E V L C NP RP+ ++V L L P P
Sbjct: 255 D---------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD-LHPSFP 295
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 5/170 (2%)
Query: 363 EIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDK 422
++A+K + + + F+ E M KL H LVQL G C + + LV+++M +G L
Sbjct: 33 KVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 91
Query: 423 ILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDF 482
L + R + V G+ YL E V+HRD+ N L+ + K+ DF
Sbjct: 92 YLRTQ-RGLFAAETLLGMCLDVCEGMAYLEE---ASVIHRDLAARNCLVGENQVIKVSDF 147
Query: 483 GLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEV 532
G+ R +T V + +PE+ R ++ +DV++FGV M EV
Sbjct: 148 GMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 197
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 5/170 (2%)
Query: 363 EIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDK 422
++A+K + + F+ E M KL H LVQL G C + + LV+++M +G L
Sbjct: 53 KVAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 111
Query: 423 ILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDF 482
L + R + V G+ YL E V+HRD+ N L+ + K+ DF
Sbjct: 112 YLRTQ-RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDF 167
Query: 483 GLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEV 532
G+ R +T V + +PE+ R ++ +DV++FGV M EV
Sbjct: 168 GMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 217
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 12/182 (6%)
Query: 363 EIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDK 422
++A+K + + +F+ E M L H LVQL G C ++ + ++ +YM NG L
Sbjct: 41 DVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 99
Query: 423 ILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDF 482
L R Q + K V + YL + LHRD+ N L++ K+ DF
Sbjct: 100 YL-REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDF 155
Query: 483 GLARLYDHGNDLHTTNVVGT---VGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRP 538
GL+R + D T+ VG+ V + PE+L + ++ +D++AFGV M E+ + G+ P
Sbjct: 156 GLSR---YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 212
Query: 539 VQ 540
+
Sbjct: 213 YE 214
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 108/227 (47%), Gaps = 33/227 (14%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVS-EIVSMGKLR 391
P SY + G G VY+ L S +A+KKV D K+F + E+ M KL
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 71
Query: 392 HRNLVQLRGYCRRKGE------LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVA 445
H N+V+LR + GE L LV DY+P + +Y R + R + V
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVAR----HYSRAKQTLPVI 122
Query: 446 FGLLYLHEEWEQV-------VLHRDIKPANVLLDADLEG-KLGDFGLARLYDHGNDLHTT 497
+ LY+++ + + + HRDIKP N+LLD D KL DFG A+ G
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NV 180
Query: 498 NVVGTVGYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE 543
+ + + Y APEL+ T+S DV++ G + E+ G +P+ PG+
Sbjct: 181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGD 226
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 119/260 (45%), Gaps = 26/260 (10%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGMK-QFVSEIVSMGKLRHRN 394
Y+ L K +G G+V++ + ++A+KKV +++ G + EI + L+H N
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 77
Query: 395 LVQLRGYCRRK--------GELLLVYDYMPN---GSLDKILYSNTRPSLNWFQRFRIIKG 443
+V L CR K G + LV+D+ + G L +L T + R+++
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK-----RVMQM 132
Query: 444 VAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTT---NVV 500
+ GL Y+H +LHRD+K ANVL+ D KL DFGLAR + + N V
Sbjct: 133 LLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 189
Query: 501 GTVGYLAPELLRNGRGT-TSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDV 559
T+ Y PELL R D++ G M E+ R P+ G + + G +
Sbjct: 190 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW-TRSPIMQGNTEQHQLALISQLCGSI 248
Query: 560 LDASDPRLEGIYVEEQMEIV 579
P ++ + E++E+V
Sbjct: 249 TPEVWPNVDNYELYEKLELV 268
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 123/276 (44%), Gaps = 26/276 (9%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R S K + K G G+V+ G +S ++AVK + ++ F+ E M L+H
Sbjct: 11 RESIKLVKKLGAGQFGEVWMGYYNNS-TKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDK 68
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L ++ + ++ ++M GSL L S+ + + +A G+ Y+
Sbjct: 69 LVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER- 127
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+ +HRD++ ANVL+ L K+ DFGLAR+ + + + APE + G
Sbjct: 128 --KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG 185
Query: 515 RGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASD-----PRLEG 569
T ++V++FG+ + E+ + PG + DV+ A PR+E
Sbjct: 186 CFTIKSNVWSFGILLYEIVTYGKIPYPGRTN-----------ADVMSALSQGYRMPRMEN 234
Query: 570 IYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
+++ ++K+ C + RP+ + LD
Sbjct: 235 --CPDELYDIMKM---CWKEKAEERPTFDYLQSVLD 265
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 119/260 (45%), Gaps = 26/260 (10%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGMK-QFVSEIVSMGKLRHRN 394
Y+ L K +G G+V++ + ++A+KKV +++ G + EI + L+H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 395 LVQLRGYCRRK--------GELLLVYDYMPN---GSLDKILYSNTRPSLNWFQRFRIIKG 443
+V L CR K G + LV+D+ + G L +L T + R+++
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK-----RVMQM 133
Query: 444 VAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTT---NVV 500
+ GL Y+H +LHRD+K ANVL+ D KL DFGLAR + + N V
Sbjct: 134 LLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 501 GTVGYLAPELLRNGRGT-TSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDV 559
T+ Y PELL R D++ G M E+ R P+ G + + G +
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW-TRSPIMQGNTEQHQLALISQLCGSI 249
Query: 560 LDASDPRLEGIYVEEQMEIV 579
P ++ + E++E+V
Sbjct: 250 TPEVWPNVDNYELYEKLELV 269
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 126/266 (47%), Gaps = 33/266 (12%)
Query: 358 PSSHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYM 415
P +AVK + D ++ + VSE+ M + +H+N++ L G C + G L ++ +Y
Sbjct: 64 PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 123
Query: 416 PNGSLDKILYSNTRPSLNW-FQRFRIIK-------------GVAFGLLYLHEEWEQVVLH 461
G+L + L + P + + + R+ + +A G+ YL Q +H
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIH 180
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDL-HTTNVVGTVGYLAPELLRNGRGTTST 520
RD+ NVL+ + ++ DFGLAR ++ + TTN V ++APE L + T +
Sbjct: 181 RDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 521 DVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
DV++FGV M E+ G P PG ++ + ++G +D +Y+
Sbjct: 241 DVWSFGVLMWEIFTLGGSPY-PG--IPVEELFKLLKEGHRMDKPANCTNELYM------- 290
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLD 605
+ C H+ P RP+ +Q+V+ LD
Sbjct: 291 --MMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 83/158 (52%), Gaps = 10/158 (6%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIK 442
EI ++ RH ++++L ++ +V +Y+ G L + N R L+ + R+ +
Sbjct: 66 EIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR--LDEKESRRLFQ 123
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT 502
+ G+ Y H +V+HRD+KP NVLLDA + K+ DFGL+ + G L + G+
Sbjct: 124 QILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS--CGS 178
Query: 503 VGYLAPELLRNGR--GTTSTDVYAFGVFMLEVACGRRP 538
Y APE++ +GR D+++ GV + + CG P
Sbjct: 179 PNYAAPEVI-SGRLYAGPEVDIWSSGVILYALLCGTLP 215
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 124/264 (46%), Gaps = 45/264 (17%)
Query: 364 IAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKI 423
+AVK + + K F E + L+H ++V+ G C L++V++YM +G L+K
Sbjct: 48 VAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKF 107
Query: 424 LYSN--------------TRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANV 469
L ++ + L Q I +A G++YL Q +HRD+ N
Sbjct: 108 LRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNC 164
Query: 470 LLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG-------YLAPELLRNGRGTTSTDV 522
L+ A+L K+GDFG++R D+++T+ G ++ PE + + TT +DV
Sbjct: 165 LVGANLLVKIGDFGMSR------DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDV 218
Query: 523 YAFGVFMLEV-ACGRRP-VQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVL 580
++FGV + E+ G++P Q + VI+ +G VL+ PR+ V + M
Sbjct: 219 WSFGVILWEIFTYGKQPWFQLSNTE----VIECITQGRVLER--PRVCPKEVYDVM---- 268
Query: 581 KLGLFCSHSNPDTRPSMRQVVQYL 604
L C P R +++++ + L
Sbjct: 269 ---LGCWQREPQQRLNIKEIYKIL 289
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 19 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 78
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L L+ F R I +A L Y H + V
Sbjct: 79 HDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---KRV 130
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ DFG + H T++ GT+ YL PE++
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 187
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + + +++ ++ + P + + +
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL 241
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
LK NP RP +R+V+++ P I NSS
Sbjct: 242 LK-------HNPSQRPMLREVLEH-------PWITANSS 266
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 125/266 (46%), Gaps = 33/266 (12%)
Query: 358 PSSHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYM 415
P +AVK + D ++ + VSE+ M + +H+N++ L G C + G L ++ Y
Sbjct: 64 PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYA 123
Query: 416 PNGSLDKILYSNTRPSLNW-FQRFRIIK-------------GVAFGLLYLHEEWEQVVLH 461
G+L + L + P + + + R+ + +A G+ YL Q +H
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIH 180
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDL-HTTNVVGTVGYLAPELLRNGRGTTST 520
RD+ NVL+ + K+ DFGLAR ++ + TTN V ++APE L + T +
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 521 DVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
DV++FGV M E+ G P PG ++ + ++G +D +Y+
Sbjct: 241 DVWSFGVLMWEIFTLGGSPY-PG--IPVEELFKLLKEGHRMDKPANCTNELYM------- 290
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLD 605
+ C H+ P RP+ +Q+V+ LD
Sbjct: 291 --MMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 23 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 82
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L L+ F R I +A L Y H + V
Sbjct: 83 HDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---KRV 134
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ DFG + H T++ GT+ YL PE++
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 191
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + + +++ ++ + P + + +
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL 245
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
LK NP RP +R+V+++ P I NSS
Sbjct: 246 LK-------HNPSQRPMLREVLEH-------PWITANSS 270
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 125/266 (46%), Gaps = 33/266 (12%)
Query: 358 PSSHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYM 415
P +AVK + D ++ + VSE+ M + +H+N++ L G C + G L ++ Y
Sbjct: 64 PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYA 123
Query: 416 PNGSLDKILYSNTRPSLNW-FQRFRIIK-------------GVAFGLLYLHEEWEQVVLH 461
G+L + L + P + + + R+ + +A G+ YL Q +H
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIH 180
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDL-HTTNVVGTVGYLAPELLRNGRGTTST 520
RD+ NVL+ + K+ DFGLAR ++ + TTN V ++APE L + T +
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 521 DVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
DV++FGV M E+ G P PG ++ + ++G +D +Y+
Sbjct: 241 DVWSFGVLMWEIFTLGGSPY-PG--IPVEELFKLLKEGHRMDKPANCTNELYM------- 290
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLD 605
+ C H+ P RP+ +Q+V+ LD
Sbjct: 291 --MMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 81/154 (52%), Gaps = 10/154 (6%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGE--LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI 440
EI + L H ++V+ +G C +GE + LV +Y+P GSL L R + Q
Sbjct: 61 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLF 117
Query: 441 IKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVV 500
+ + G+ YLH Q +HR + NVLLD D K+GDFGLA+ G++ +
Sbjct: 118 AQQICEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 174
Query: 501 GT--VGYLAPELLRNGRGTTSTDVYAFGVFMLEV 532
G V + APE L+ + ++DV++FGV + E+
Sbjct: 175 GDSPVFWYAPECLKECKFYYASDVWSFGVTLYEL 208
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 18 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 77
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L L+ F R I +A L Y H + V
Sbjct: 78 HDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---KRV 129
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ DFG + H T++ GT+ YL PE++
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 186
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + + +++ ++ + P + + +
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL 240
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
LK NP RP +R+V+++ P I NSS
Sbjct: 241 LK-------HNPSQRPMLREVLEH-------PWITANSS 265
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 81/154 (52%), Gaps = 10/154 (6%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGE--LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI 440
EI + L H ++V+ +G C +GE + LV +Y+P GSL L R + Q
Sbjct: 60 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLF 116
Query: 441 IKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVV 500
+ + G+ YLH Q +HR + NVLLD D K+GDFGLA+ G++ +
Sbjct: 117 AQQICEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 173
Query: 501 GT--VGYLAPELLRNGRGTTSTDVYAFGVFMLEV 532
G V + APE L+ + ++DV++FGV + E+
Sbjct: 174 GDSPVFWYAPECLKECKFYYASDVWSFGVTLYEL 207
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 117/279 (41%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 44 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 103
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L L+ F R I +A L Y H + V
Sbjct: 104 HDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS---KRV 155
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ DFG + H T + GT+ YL PE++
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 212
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + Y + + + E +++
Sbjct: 213 VDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTFPDFVTEGARDLI 263
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
+L H NP RP +R+V+++ P I NSS
Sbjct: 264 SRL---LKH-NPSQRPMLREVLEH-------PWITANSS 291
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 117/279 (41%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 35 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 94
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L L+ F R I +A L Y H + V
Sbjct: 95 HDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS---KRV 146
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ DFG + H T + GT+ YL PE++
Sbjct: 147 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 203
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + Y + + + E +++
Sbjct: 204 VDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTFPDFVTEGARDLI 254
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
+L H NP RP +R+V+++ P I NSS
Sbjct: 255 SRL---LKH-NPSQRPMLREVLEH-------PWITANSS 282
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 21 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 80
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L L+ F R I +A L Y H + V
Sbjct: 81 HDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---KRV 132
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ DFG + H T + GT+ YL PE++
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + + +++ ++ + P + + +
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL 243
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
LK NP RP +R+V+++ P I NSS
Sbjct: 244 LK-------HNPSQRPMLREVLEH-------PWITANSS 268
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH---DSDHGMKQFVSEIVSMGKLRHRN 394
+ +L + G G VY + +A+KK+ + S+ + + E+ + KLRH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
+Q RG R+ LV +Y GS +L + +P L + + G GL YLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKP-LQEVEIAAVTHGALQGLAYLHS- 172
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPEL---L 511
++HRD+K N+LL KLGDFG A + N VGT ++APE+ +
Sbjct: 173 --HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF-----VGTPYWMAPEVILAM 225
Query: 512 RNGRGTTSTDVYAFGVFMLEVACGRRPV 539
G+ DV++ G+ +E+A + P+
Sbjct: 226 DEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 18 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 77
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L L+ F R I +A L Y H + V
Sbjct: 78 HDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS---KRV 129
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ DFG + H T + GT+ YL PE++
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 186
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + + +++ ++ + P + + +
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL 240
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
LK NP RP +R+V+++ P I NSS
Sbjct: 241 LK-------HNPSQRPMLREVLEH-------PWITANSS 265
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 18 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 77
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L L+ F R I +A L Y H + V
Sbjct: 78 HDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---KRV 129
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ DFG + H T++ GT+ YL PE++
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 186
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + + +++ ++ + P + + +
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL 240
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
LK NP RP +R+V+++ P I NSS
Sbjct: 241 LK-------HNPSQRPMLREVLEH-------PWITANSS 265
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 128/291 (43%), Gaps = 34/291 (11%)
Query: 341 LYKATKGGSGKVYRG-----VLPSSHAEIAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRN 394
L + +G G VY G + + +AVK V + + +F++E M +
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYS--------NTRPSLNWFQRFRIIKGVAF 446
+V+L G + L+V + M +G L L S RP + ++ +A
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 447 GLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGY 505
G+ YL+ + +HRD+ N ++ D K+GDFG+ R +Y+ + V +
Sbjct: 142 GMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 506 LAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQP-GELDLLDWVIDYWQKGDVLDAS 563
+APE L++G TTS+D+++FGV + E+ + +P Q +L +V+D G LD
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD----GGYLDQP 254
Query: 564 DPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIP 614
D E V L C NP RP+ ++V L L P P
Sbjct: 255 D---------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD-LHPSFP 295
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 345 TKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRR 404
+G G V++ L + + + + + D Q E+ S+ ++H N++Q G +R
Sbjct: 33 ARGRFGCVWKAQLLNEYVAVKIFPI---QDKQSWQNEYEVYSLPGMKHENILQFIGAEKR 89
Query: 405 KG----ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEW----- 455
+L L+ + GSL L +N ++W + I + +A GL YLHE+
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFLKANV---VSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 456 --EQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAPELLR 512
+ + HRDIK NVLL +L + DFGLA ++ G T+ VGT Y+APE+L
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLE 206
Query: 513 NG-----RGTTSTDVYAFGVFMLEVA 533
D+YA G+ + E+A
Sbjct: 207 GAINFQRDAFLRIDMYAMGLVLWELA 232
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 18 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 77
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L L+ F R I +A L Y H + V
Sbjct: 78 HDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS---KRV 129
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ DFG + H T + GT+ YL PE++
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTELCGTLDYLPPEMIEGRMHDEK 186
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + + +++ ++ + P + + +
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL 240
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
LK NP RP +R+V+++ P I NSS
Sbjct: 241 LK-------HNPSQRPMLREVLEH-------PWITANSS 265
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 23 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 82
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L L+ F R I +A L Y H + V
Sbjct: 83 HDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---KRV 134
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ DFG + H T + GT+ YL PE++
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 191
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + + +++ ++ + P + + +
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL 245
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
LK NP RP +R+V+++ P I NSS
Sbjct: 246 LK-------HNPSQRPMLREVLEH-------PWITANSS 270
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 17 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 76
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L L+ F R I +A L Y H + V
Sbjct: 77 HDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---KRV 128
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ DFG + H T + GT+ YL PE++
Sbjct: 129 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 185
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + + +++ ++ + P + + +
Sbjct: 186 VDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL 239
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
LK NP RP +R+V+++ P I NSS
Sbjct: 240 LK-------HNPSQRPMLREVLEH-------PWITANSS 264
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 5/170 (2%)
Query: 363 EIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDK 422
++A+K + + + F+ E M KL H LVQL G C + + LV ++M +G L
Sbjct: 34 KVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSD 92
Query: 423 ILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDF 482
L + R + V G+ YL E V+HRD+ N L+ + K+ DF
Sbjct: 93 YLRTQ-RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDF 148
Query: 483 GLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEV 532
G+ R +T V + +PE+ R ++ +DV++FGV M EV
Sbjct: 149 GMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 198
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 21 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 80
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L L+ F R I +A L Y H + V
Sbjct: 81 HDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---KRV 132
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ DFG + H T + GT+ YL PE++
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + + +++ ++ + P + + +
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL 243
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
LK NP RP +R+V+++ P I NSS
Sbjct: 244 LK-------HNPSQRPMLREVLEH-------PWITANSS 268
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 117/279 (41%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 19 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 78
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L L+ F R I +A L Y H + V
Sbjct: 79 HDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---KRV 130
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ DFG + H T + GT+ YL PE++
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSGTLDYLPPEMIEGRMHDEK 187
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + Y + + + E +++
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTFPDFVTEGARDLI 238
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
+L H NP RP +R+V+++ P I NSS
Sbjct: 239 SRL---LKH-NPSQRPMLREVLEH-------PWITANSS 266
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH---DSDHGMKQFVSEIVSMGKLRHRN 394
+ +L + G G VY + +A+KK+ + S+ + + E+ + KLRH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
+Q RG R+ LV +Y GS +L + +P L + + G GL YLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKP-LQEVEIAAVTHGALQGLAYLHS- 133
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPEL---L 511
++HRD+K N+LL KLGDFG A + N VGT ++APE+ +
Sbjct: 134 --HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF-----VGTPYWMAPEVILAM 186
Query: 512 RNGRGTTSTDVYAFGVFMLEVACGRRPV 539
G+ DV++ G+ +E+A + P+
Sbjct: 187 DEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 20/200 (10%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRK 405
+G + VYR + A+K + D + + +EI + +L H N+++L+
Sbjct: 63 RGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVR--TEIGVLLRLSHPNIIKLKEIFETP 120
Query: 406 GELLLVYDYMPNGSL-DKIL---YSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
E+ LV + + G L D+I+ Y + R + + ++ I++ VA YLHE ++H
Sbjct: 121 TEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQ--ILEAVA----YLHENG---IVH 171
Query: 462 RDIKPANVLLDA---DLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTT 518
RD+KP N+L D K+ DFGL+++ +H + T V GT GY APE+LR
Sbjct: 172 RDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT--VCGTPGYCAPEILRGCAYGP 229
Query: 519 STDVYAFGVFMLEVACGRRP 538
D+++ G+ + CG P
Sbjct: 230 EVDMWSVGIITYILLCGFEP 249
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 382 SEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRII 441
+EI ++ LRH+++ QL ++ +V +Y P G L + S R S + R++
Sbjct: 57 TEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLS---EEETRVV 113
Query: 442 -KGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVV 500
+ + + Y+H Q HRD+KP N+L D + KL DFGL D H
Sbjct: 114 FRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC 170
Query: 501 GTVGYLAPELLRNGRGTTS-TDVYAFGVFMLEVACGRRP 538
G++ Y APEL++ S DV++ G+ + + CG P
Sbjct: 171 GSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLP 209
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 22 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 81
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L L+ F R I +A L Y H + V
Sbjct: 82 HDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---KRV 133
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ DFG + H T + GT+ YL PE++
Sbjct: 134 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 190
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + + +++ ++ + P + + +
Sbjct: 191 VDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL 244
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
LK NP RP +R+V+++ P I NSS
Sbjct: 245 LK-------HNPSQRPMLREVLEH-------PWITANSS 269
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 136/307 (44%), Gaps = 37/307 (12%)
Query: 341 LYKATKGGSGKVYRG-----VLPSSHAEIAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRN 394
L + +G G VY G + + +AVK V + + +F++E M +
Sbjct: 21 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 80
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYS--------NTRPSLNWFQRFRIIKGVAF 446
+V+L G + L+V + M +G L L S RP + ++ +A
Sbjct: 81 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 140
Query: 447 GLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGY 505
G+ YL+ + +HRD+ N ++ D K+GDFG+ R +Y+ + V +
Sbjct: 141 GMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 506 LAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQP-GELDLLDWVIDYWQKGDVLDAS 563
+APE L++G TTS+D+++FGV + E+ + +P Q +L +V+D G LD
Sbjct: 198 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD----GGYLDQP 253
Query: 564 DPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSSVFGVL 623
D E V L C NP RP+ ++V L L P P S F
Sbjct: 254 D---------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD-LHPSFP-EVSFFH-- 300
Query: 624 TAKNEAP 630
+ +N+AP
Sbjct: 301 SEENKAP 307
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 12/211 (5%)
Query: 332 SPHRFSYKNLYKATKGGSGKVY--RGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGK 389
PH +Y+ L KG KV R +L + + + +++ E+ M
Sbjct: 10 QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 390 LRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQ-RFRIIKGVAFGL 448
L H N+V+L + L LV +Y G + L ++ R + +FR I +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI---VSAV 126
Query: 449 LYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAP 508
Y H+++ ++HRD+K N+LLDAD+ K+ DFG + + GN L T G+ Y AP
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAP 181
Query: 509 ELLRNGR-GTTSTDVYAFGVFMLEVACGRRP 538
EL + + DV++ GV + + G P
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 118/279 (42%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 23 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 82
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L L+ F R I +A L Y H + V
Sbjct: 83 HDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---KRV 134
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ DFG + H T + GT+ YL PE +
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEXIEGRXHDEK 191
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + + +++ ++ + P + + +
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL 245
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
LK NP RP +R+V+++ P I NSS
Sbjct: 246 LK-------HNPSQRPXLREVLEH-------PWITANSS 270
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 32/216 (14%)
Query: 346 KGGSGKVYR----GVLP-SSHAEIAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRNLVQLR 399
+G G+V++ G+LP +AVK + ++ M+ F E M + + N+V+L
Sbjct: 57 EGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLL 116
Query: 400 GYCRRKGELLLVYDYMPNGSLDKILYS--------------NTR--------PSLNWFQR 437
G C + L+++YM G L++ L S +TR P L+ ++
Sbjct: 117 GVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQ 176
Query: 438 FRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHT 496
I + VA G+ YL E+ +HRD+ N L+ ++ K+ DFGL+R +Y
Sbjct: 177 LCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKAD 233
Query: 497 TNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEV 532
N + ++ PE + R TT +DV+A+GV + E+
Sbjct: 234 GNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 12/211 (5%)
Query: 332 SPHRFSYKNLYKATKGGSGKVY--RGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGK 389
PH +Y+ L KG KV R +L + + + +++ E+ M
Sbjct: 10 QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 390 LRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQ-RFRIIKGVAFGL 448
L H N+V+L + L LV +Y G + L ++ R + +FR I +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI---VSAV 126
Query: 449 LYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAP 508
Y H+++ ++HRD+K N+LLDAD+ K+ DFG + + GN L T G+ Y AP
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAP 181
Query: 509 ELLRNGR-GTTSTDVYAFGVFMLEVACGRRP 538
EL + + DV++ GV + + G P
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY +S +A+K K + Q E+ LRH N+++L GY
Sbjct: 18 KGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 77
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L L+ F R I +A L Y H + V
Sbjct: 78 HDSTRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---KKV 129
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ DFG + H + GT+ YL PE++
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 186
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + D +++ ++ + P + + +
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQ------DTYKRISRVEFTFPDFVTEGARDLISRL 240
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
LK NP RP +R+V+++ P I NSS
Sbjct: 241 LK-------HNPSQRPMLREVLEH-------PWITANSS 265
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 18 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 77
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L L+ F R I +A L Y H + V
Sbjct: 78 HDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---KRV 129
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ DFG + H T + GT+ YL PE++
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTXLCGTLDYLPPEMIEGRMHDEK 186
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + + +++ ++ + P + + +
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL 240
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
LK NP RP +R+V+++ P I NSS
Sbjct: 241 LK-------HNPSQRPMLREVLEH-------PWITANSS 265
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 135/304 (44%), Gaps = 41/304 (13%)
Query: 347 GGSGKVYRGV---LPS--SHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQL 398
G G+VY G +P+ S ++AVK +VC + D F+ E + + K H+N+V+
Sbjct: 82 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE--LDFLMEALIISKFNHQNIVRC 139
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRP------SLNWFQRFRIIKGVAFGLLYLH 452
G + ++ + M G L L TRP SL + + +A G YL
Sbjct: 140 IGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 453 EEWEQVVLHRDIKPANVLLDADLEG---KLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAP 508
E +HRDI N LL G K+GDFG+AR +Y G + V ++ P
Sbjct: 199 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRL 567
E G T+ TD ++FGV + E+ + G P P + + V+++ G +D
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY-PSKSN--QEVLEFVTSGGRMDPPKNCP 312
Query: 568 EGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSSV---FGVLT 624
+Y ++ C P+ RP+ +++ ++ PD+ +N+++ +G L
Sbjct: 313 GPVY---------RIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV-INTALPIEYGPLV 362
Query: 625 AKNE 628
+ E
Sbjct: 363 EEEE 366
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 21/184 (11%)
Query: 364 IAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSL-D 421
+A+K + ++ G + +EI + K++H N+V L G L L+ + G L D
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 422 KIL----YSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVL---LDAD 474
+I+ Y+ S FQ +K YLH+ ++HRD+KP N+L LD D
Sbjct: 106 RIVEKGFYTERDASRLIFQVLDAVK-------YLHD---LGIVHRDLKPENLLYYSLDED 155
Query: 475 LEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVAC 534
+ + DFGL+++ D G+ L T GT GY+APE+L + + D ++ GV + C
Sbjct: 156 SKIMISDFGLSKMEDPGSVLSTA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 535 GRRP 538
G P
Sbjct: 214 GYPP 217
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 126/287 (43%), Gaps = 45/287 (15%)
Query: 341 LYKATKGGSGKVYRG-----VLPSSHAEIAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRN 394
L + +G G VY G + + +AVK V + + +F++E M +
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYS--------NTRPSLNWFQRFRIIKGVAF 446
+V+L G + L+V + M +G L L S RP + ++ +A
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 447 GLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG-- 504
G+ YL+ + +HRD+ N ++ D K+GDFG+ R D+ T+ G
Sbjct: 142 GMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTR------DIXETDXXRKGGKG 192
Query: 505 -----YLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQP-GELDLLDWVIDYWQKG 557
++APE L++G TTS+D+++FGV + E+ + +P Q +L +V+D G
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD----G 248
Query: 558 DVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYL 604
LD D E V L C NP+ RP+ ++V L
Sbjct: 249 GYLDQPD---------NCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 21/184 (11%)
Query: 364 IAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSL-D 421
+A+K + ++ G + +EI + K++H N+V L G L L+ + G L D
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 422 KIL----YSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVL---LDAD 474
+I+ Y+ S FQ +K YLH+ ++HRD+KP N+L LD D
Sbjct: 106 RIVEKGFYTERDASRLIFQVLDAVK-------YLHD---LGIVHRDLKPENLLYYSLDED 155
Query: 475 LEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVAC 534
+ + DFGL+++ D G+ L T GT GY+APE+L + + D ++ GV + C
Sbjct: 156 SKIMISDFGLSKMEDPGSVLSTA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 535 GRRP 538
G P
Sbjct: 214 GYPP 217
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 12/211 (5%)
Query: 332 SPHRFSYKNLYKATKGGSGKVY--RGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGK 389
PH +Y+ L KG KV R +L + + + +++ E+ M
Sbjct: 10 QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 390 LRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQ-RFRIIKGVAFGL 448
L H N+V+L + L LV +Y G + L ++ R + +FR I +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI---VSAV 126
Query: 449 LYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAP 508
Y H+++ ++HRD+K N+LLDAD+ K+ DFG + + GN L T G+ Y AP
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAP 181
Query: 509 ELLRNGR-GTTSTDVYAFGVFMLEVACGRRP 538
EL + + DV++ GV + + G P
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 118/260 (45%), Gaps = 26/260 (10%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGMK-QFVSEIVSMGKLRHRN 394
Y+ L K +G G+V++ + ++A+KKV +++ G + EI + L+H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 395 LVQLRGYCRRKGE--------LLLVYDYMPN---GSLDKILYSNTRPSLNWFQRFRIIKG 443
+V L CR K + LV+D+ + G L +L T + R+++
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIK-----RVMQM 133
Query: 444 VAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTT---NVV 500
+ GL Y+H +LHRD+K ANVL+ D KL DFGLAR + + N V
Sbjct: 134 LLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 501 GTVGYLAPELLRNGRGT-TSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDV 559
T+ Y PELL R D++ G M E+ R P+ G + + G +
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW-TRSPIMQGNTEQHQLALISQLCGSI 249
Query: 560 LDASDPRLEGIYVEEQMEIV 579
P ++ + E++E+V
Sbjct: 250 TPEVWPNVDNYELYEKLELV 269
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 129/291 (44%), Gaps = 34/291 (11%)
Query: 341 LYKATKGGSGKVYRG-----VLPSSHAEIAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRN 394
L + +G G VY G + + +AVK V + + +F++E M +
Sbjct: 23 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 82
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYS--------NTRPSLNWFQRFRIIKGVAF 446
+V+L G + L+V + M +G L L S RP + ++ +A
Sbjct: 83 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 142
Query: 447 GLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGY 505
G+ YL+ + +HR++ N ++ D K+GDFG+ R +Y+ + V +
Sbjct: 143 GMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 506 LAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQP-GELDLLDWVIDYWQKGDVLDAS 563
+APE L++G TTS+D+++FGV + E+ + +P Q +L +V+D G LD
Sbjct: 200 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD----GGYLDQP 255
Query: 564 DPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIP 614
D E V L C NP+ RP+ ++V L L P P
Sbjct: 256 D---------NCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD-LHPSFP 296
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 129/291 (44%), Gaps = 34/291 (11%)
Query: 341 LYKATKGGSGKVYRG-----VLPSSHAEIAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRN 394
L + +G G VY G + + +AVK V + + +F++E M +
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYS--------NTRPSLNWFQRFRIIKGVAF 446
+V+L G + L+V + M +G L L S RP + ++ +A
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 447 GLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGY 505
G+ YL+ + +HR++ N ++ D K+GDFG+ R +Y+ + V +
Sbjct: 142 GMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 506 LAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQP-GELDLLDWVIDYWQKGDVLDAS 563
+APE L++G TTS+D+++FGV + E+ + +P Q +L +V+D G LD
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD----GGYLDQP 254
Query: 564 DPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIP 614
D E V L C NP+ RP+ ++V L L P P
Sbjct: 255 D---------NCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD-LHPSFP 295
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 135/304 (44%), Gaps = 41/304 (13%)
Query: 347 GGSGKVYRGV---LPS--SHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQL 398
G G+VY G +P+ S ++AVK +VC + D F+ E + + K H+N+V+
Sbjct: 59 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE--LDFLMEALIISKFNHQNIVRC 116
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRP------SLNWFQRFRIIKGVAFGLLYLH 452
G + ++ + M G L L TRP SL + + +A G YL
Sbjct: 117 IGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 453 EEWEQVVLHRDIKPANVLLDADLEG---KLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAP 508
E +HRDI N LL G K+GDFG+AR +Y G + V ++ P
Sbjct: 176 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRL 567
E G T+ TD ++FGV + E+ + G P P + + V+++ G +D
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY-PSKSN--QEVLEFVTSGGRMDPPKNCP 289
Query: 568 EGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSSV---FGVLT 624
+Y ++ C P+ RP+ +++ ++ PD+ +N+++ +G L
Sbjct: 290 GPVY---------RIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV-INTALPIEYGPLV 339
Query: 625 AKNE 628
+ E
Sbjct: 340 EEEE 343
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 21/184 (11%)
Query: 364 IAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSL-D 421
+A+K + ++ G + +EI + K++H N+V L G L L+ + G L D
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 422 KIL----YSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVL---LDAD 474
+I+ Y+ S FQ +K YLH+ ++HRD+KP N+L LD D
Sbjct: 106 RIVEKGFYTERDASRLIFQVLDAVK-------YLHD---LGIVHRDLKPENLLYYSLDED 155
Query: 475 LEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVAC 534
+ + DFGL+++ D G+ L T GT GY+APE+L + + D ++ GV + C
Sbjct: 156 SKIMISDFGLSKMEDPGSVLSTA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 535 GRRP 538
G P
Sbjct: 214 GYPP 217
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 115/279 (41%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 23 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 82
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G + K L L+ F R I +A L Y H + V
Sbjct: 83 HDATRVYLILEYAPRGEVYKEL-----QKLSKFDEQRTATYITELANALSYCHS---KRV 134
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ DFG + H + GT+ YL PE++
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLXGTLDYLPPEMIEGRMHDEK 191
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + Y + + + E +++
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTFPDFVTEGARDLI 242
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
+L H NP RP +R+V+++ P I NSS
Sbjct: 243 SRL---LKH-NPSQRPMLREVLEH-------PWITANSS 270
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 107/243 (44%), Gaps = 34/243 (13%)
Query: 379 QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF 438
Q E+ LRH N+++L GY + L+ +Y P G++ + L L+ F
Sbjct: 51 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQ 105
Query: 439 RI---IKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLH 495
R I +A L Y H + V+HRDIKP N+LL + E K+ DFG + H
Sbjct: 106 RTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSR 159
Query: 496 TTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQ 555
T + GT+ YL PE++ D+++ GV E G+ P + + ++
Sbjct: 160 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYK 213
Query: 556 KGDVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPL 615
+ ++ + P + + +LK NP RP +R+V+++ P I
Sbjct: 214 RISRVEFTFPDFVTEGARDLISRLLK-------HNPSQRPMLREVLEH-------PWITA 259
Query: 616 NSS 618
NSS
Sbjct: 260 NSS 262
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 124/272 (45%), Gaps = 31/272 (11%)
Query: 346 KGGSGKVYRGVLP-----SSHAEIAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRNLVQLR 399
+G G VY GV +A+K V + + +F++E M + ++V+L
Sbjct: 35 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94
Query: 400 GYCRRKGELLLVYDYMPNGSLDKILYSNTRPSL---------NWFQRFRIIKGVAFGLLY 450
G + L++ + M G L L S RP++ + + ++ +A G+ Y
Sbjct: 95 GVVSQGQPTLVIMELMTRGDLKSYLRS-LRPAMANNPVLAPPSLSKMIQMAGEIADGMAY 153
Query: 451 LHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAPE 509
L+ +HRD+ N ++ D K+GDFG+ R +Y+ + V +++PE
Sbjct: 154 LNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 210
Query: 510 LLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEG 569
L++G TT +DV++FGV + E+A QP + + V+ + +G +LD D
Sbjct: 211 SLKDGVFTTYSDVWSFGVVLWEIATLAE--QPYQGLSNEQVLRFVMEGGLLDKPD----- 263
Query: 570 IYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVV 601
+++ +L C NP RPS +++
Sbjct: 264 ----NCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 23/215 (10%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRNL 395
+Y L K +G VY+G + +A+K++ + + G + E+ + L+H N+
Sbjct: 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI 62
Query: 396 VQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQR-------FRIIKGVAFGL 448
V L + L LV++Y LDK L N F++++G+A
Sbjct: 63 VTLHDIIHTEKSLTLVFEY-----LDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLA--- 114
Query: 449 LYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAP 508
Y H Q VLHRD+KP N+L++ E KL DFGLAR + VV T+ Y P
Sbjct: 115 -YCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPP 169
Query: 509 ELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPG 542
++L +T D++ G E+A G RP+ PG
Sbjct: 170 DILLGSTDYSTQIDMWGVGCIFYEMATG-RPLFPG 203
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 125/287 (43%), Gaps = 45/287 (15%)
Query: 341 LYKATKGGSGKVYRG-----VLPSSHAEIAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRN 394
L + +G G VY G + + +AVK V + + +F++E M +
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYS--------NTRPSLNWFQRFRIIKGVAF 446
+V+L G + L+V + M +G L L S RP + ++ +A
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 447 GLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG-- 504
G+ YL+ + +HRD+ N ++ D K+GDFG+ R D+ T+ G
Sbjct: 142 GMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTR------DIXETDXXRKGGKG 192
Query: 505 -----YLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQP-GELDLLDWVIDYWQKG 557
++APE L++G TTS+D+++FGV + E+ + +P Q +L +V+D G
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD----G 248
Query: 558 DVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYL 604
LD D E V L C NP RP+ ++V L
Sbjct: 249 GYLDQPD---------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 125/287 (43%), Gaps = 45/287 (15%)
Query: 341 LYKATKGGSGKVYRG-----VLPSSHAEIAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRN 394
L + +G G VY G + + +AVK V + + +F++E M +
Sbjct: 19 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 78
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYS--------NTRPSLNWFQRFRIIKGVAF 446
+V+L G + L+V + M +G L L S RP + ++ +A
Sbjct: 79 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 138
Query: 447 GLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG-- 504
G+ YL+ + +HRD+ N ++ D K+GDFG+ R D+ T+ G
Sbjct: 139 GMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTR------DIXETDXXRKGGKG 189
Query: 505 -----YLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQP-GELDLLDWVIDYWQKG 557
++APE L++G TTS+D+++FGV + E+ + +P Q +L +V+D G
Sbjct: 190 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD----G 245
Query: 558 DVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYL 604
LD D E V L C NP RP+ ++V L
Sbjct: 246 GYLDQPD---------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 283
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 119/279 (42%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 21 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 80
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L L+ F R I +A L Y H + V
Sbjct: 81 HDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---KRV 132
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ +FG + H T + GT+ YL PE++
Sbjct: 133 IHRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + + +++ ++ + P + + +
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL 243
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
LK NP RP +R+V+++ P I NSS
Sbjct: 244 LK-------HNPSQRPMLREVLEH-------PWITANSS 268
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 118/218 (54%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 71 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 126
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + +T VV T+ Y APE
Sbjct: 127 HSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 180
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 181 ILLGXKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 217
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 109/210 (51%), Gaps = 13/210 (6%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAE-IAVKKV-CHDSDHGM-KQFVSEIVSMGKLRHR 393
Y L K +G G VY+ +++ E A+KK+ D G+ + EI + +L+H
Sbjct: 3 KYHGLEKIGEGTYGVVYKA--QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 394 NLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
N+V+L K L+LV++++ + L K+L L + + G+ Y H+
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHL-DQDLKKLL-DVCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
+ VLHRD+KP N+L++ + E K+ DFGLAR + +T VV T+ Y AP++L
Sbjct: 119 ---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMG 174
Query: 514 GRG-TTSTDVYAFGVFMLEVACGRRPVQPG 542
+ +T+ D+++ G E+ G P+ PG
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNG-TPLFPG 203
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 119/279 (42%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 20 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 79
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L L+ F R I +A L Y H + V
Sbjct: 80 HDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---KRV 131
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ +FG + H T + GT+ YL PE++
Sbjct: 132 IHRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 188
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + + +++ ++ + P + + +
Sbjct: 189 VDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL 242
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
LK NP RP +R+V+++ P I NSS
Sbjct: 243 LK-------HNPSQRPMLREVLEH-------PWITANSS 267
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 118/218 (54%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 71 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 126
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + +T VV T+ Y APE
Sbjct: 127 HSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 180
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 181 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 217
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 89/182 (48%), Gaps = 12/182 (6%)
Query: 363 EIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDK 422
++A+K + + +F+ E M L H LVQL G C ++ + ++ +YM NG L
Sbjct: 35 DVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 93
Query: 423 ILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDF 482
L R Q + K V + YL + LHRD+ N L++ K+ DF
Sbjct: 94 YL-REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDF 149
Query: 483 GLARLYDHGNDLHTTNVVGT---VGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRP 538
GL+R + D T+ G+ V + PE+L + ++ +D++AFGV M E+ + G+ P
Sbjct: 150 GLSR---YVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 206
Query: 539 VQ 540
+
Sbjct: 207 YE 208
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 109/210 (51%), Gaps = 13/210 (6%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAE-IAVKKV-CHDSDHGM-KQFVSEIVSMGKLRHR 393
Y L K +G G VY+ +++ E A+KK+ D G+ + EI + +L+H
Sbjct: 3 KYHGLEKIGEGTYGVVYKA--QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 394 NLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
N+V+L K L+LV++++ + L K+L L + + G+ Y H+
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHL-DQDLKKLL-DVCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
+ VLHRD+KP N+L++ + E K+ DFGLAR + +T VV T+ Y AP++L
Sbjct: 119 ---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMG 174
Query: 514 GRG-TTSTDVYAFGVFMLEVACGRRPVQPG 542
+ +T+ D+++ G E+ G P+ PG
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNG-APLFPG 203
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 118/218 (54%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 119
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + +T VV T+ Y APE
Sbjct: 120 HSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 173
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 174 ILLGXKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 210
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 38/217 (17%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRH------------- 392
+G G+V + A+KK+ H ++ + +SE++ + L H
Sbjct: 16 QGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVRYYAAWLER 74
Query: 393 RNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYS---NTRPSLNWFQRFRIIKGVAFGLL 449
RN V+ ++K L + +Y NG+L +++S N + W R+ + + L
Sbjct: 75 RNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW----RLFRQILEALS 130
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDL-------------HT 496
Y+H Q ++HRD+KP N+ +D K+GDFGLA+ D+ +
Sbjct: 131 YIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 497 TNVVGTVGYLAPELLR-NGRGTTSTDVYAFGVFMLEV 532
T+ +GT Y+A E+L G D+Y+ G+ E+
Sbjct: 188 TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|3ZVX|A Chain A, Structure Of The Lectin From Platypodium Elegans In
Complex With A Trimannoside
pdb|3ZVX|B Chain B, Structure Of The Lectin From Platypodium Elegans In
Complex With A Trimannoside
pdb|3ZYR|A Chain A, Structure Of The Lectin From Platypodium Elegans In
Complex With Heptasaccharide
pdb|3ZYR|B Chain B, Structure Of The Lectin From Platypodium Elegans In
Complex With Heptasaccharide
Length = 261
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 20/166 (12%)
Query: 104 GMAFFISP-STDFSEAVAGSHLGIFN-RSNNGQFTNHIFAIELDTVQSPEFNDIDGN--H 159
G+AFFI+P T AG LG+FN R+ + N + A+E DT + N D N H
Sbjct: 96 GIAFFIAPPDTTIPSGSAGGLLGLFNPRTALNESANQVLAVEFDTFFAQNSNTWDPNYQH 155
Query: 160 VGIDVNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWIDYNGQEKLVNVTLAPVPNP 219
+GIDVN ++S S R+ E++E GK + + + YN + ++V +A P+
Sbjct: 156 IGIDVNSIRS--SKVVRW---ERRE--------GKTLNVLVTYNPSTRTIDV-VATYPDG 201
Query: 220 KPSRPLLSTSIDLSQILQDSMYVGLSAATGTRVSDYYILGWSFNKS 265
+ R LS +DL+ IL + + VG SAA+G + + + WSF +
Sbjct: 202 Q--RYQLSHVVDLTTILPEWVRVGFSAASGEQFQTHNLESWSFTST 245
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 118/218 (54%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 118
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + +T VV T+ Y APE
Sbjct: 119 HSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 172
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 209
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 21/184 (11%)
Query: 364 IAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSL-- 420
+A+K + + G + +EI + K++H N+V L G L L+ + G L
Sbjct: 46 VAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 421 ---DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVL---LDAD 474
+K Y+ S FQ +K YLH+ ++HRD+KP N+L LD D
Sbjct: 106 RIVEKGFYTERDASRLIFQVLDAVK-------YLHD---LGIVHRDLKPENLLYYSLDED 155
Query: 475 LEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVAC 534
+ + DFGL+++ D G+ L T GT GY+APE+L + + D ++ GV + C
Sbjct: 156 SKIMISDFGLSKMEDPGSVLSTA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 535 GRRP 538
G P
Sbjct: 214 GYPP 217
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 13/210 (6%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAE-IAVKKV-CHDSDHGM-KQFVSEIVSMGKLRHR 393
Y L K +G G VY+ +++ E A+KK+ D G+ + EI + +L+H
Sbjct: 3 KYHGLEKIGEGTYGVVYKA--QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 394 NLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
N+V+L K L+LV++++ + L K+L L + + G+ Y H+
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHL-DQDLKKLL-DVCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
+ VLHRD+KP N+L++ + E K+ DFGLAR + +T +V T+ Y AP++L
Sbjct: 119 ---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMG 174
Query: 514 GRG-TTSTDVYAFGVFMLEVACGRRPVQPG 542
+ +T+ D+++ G E+ G P+ PG
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNG-TPLFPG 203
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 117/279 (41%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 44 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 103
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L L+ F R I +A L Y H + V
Sbjct: 104 HDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS---KRV 155
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ DFG + H ++ GT+ YL PE++
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEK 212
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + Y + + + E +++
Sbjct: 213 VDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTFPDFVTEGARDLI 263
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
+L H NP RP +R+V+++ P I NSS
Sbjct: 264 SRL---LKH-NPSQRPMLREVLEH-------PWITANSS 291
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 118/218 (54%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 119
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + +T VV T+ Y APE
Sbjct: 120 HSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 173
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 210
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 118/218 (54%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 118
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + +T VV T+ Y APE
Sbjct: 119 HSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 172
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 209
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 118/218 (54%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 119
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + +T VV T+ Y APE
Sbjct: 120 HSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 173
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 210
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 118/218 (54%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 120
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + +T VV T+ Y APE
Sbjct: 121 HSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 174
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 211
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 90/201 (44%), Gaps = 17/201 (8%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 22 KGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 81
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L +R F R I +A L Y H + V
Sbjct: 82 HDATRVYLILEYAPLGTVYRELQKLSR-----FDEQRTATYITELANALSYCHS---KRV 133
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL ++ E K+ DFG + H T + GT+ YL PE++
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 190
Query: 520 TDVYAFGVFMLEVACGRRPVQ 540
D+++ GV E G P +
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFE 211
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 124/272 (45%), Gaps = 31/272 (11%)
Query: 346 KGGSGKVYRGVLP-----SSHAEIAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRNLVQLR 399
+G G VY GV +A+K V + + +F++E M + ++V+L
Sbjct: 25 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 84
Query: 400 GYCRRKGELLLVYDYMPNGSLDKILYSNTRPSL---------NWFQRFRIIKGVAFGLLY 450
G + L++ + M G L L S RP++ + + ++ +A G+ Y
Sbjct: 85 GVVSQGQPTLVIMELMTRGDLKSYLRS-LRPAMANNPVLAPPSLSKMIQMAGEIADGMAY 143
Query: 451 LHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAPE 509
L+ +HRD+ N ++ D K+GDFG+ R +Y+ + V +++PE
Sbjct: 144 LNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 200
Query: 510 LLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEG 569
L++G TT +DV++FGV + E+A QP + + V+ + +G +LD D
Sbjct: 201 SLKDGVFTTYSDVWSFGVVLWEIATLAE--QPYQGLSNEQVLRFVMEGGLLDKPD----- 253
Query: 570 IYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVV 601
+++ +L C NP RPS +++
Sbjct: 254 ----NCPDMLFELMRMCWQYNPKMRPSFLEII 281
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY SH +A+K K + + Q EI L H N+++L Y
Sbjct: 33 KGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYF 92
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHR 462
+ + L+ +Y P G L K L + + + + I++ +A L+Y H + V+HR
Sbjct: 93 YDRRRIYLILEYAPRGELYKELQKSC--TFDEQRTATIMEELADALMYCHG---KKVIHR 147
Query: 463 DIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDV 522
DIKP N+LL E K+ DFG + H L + GT+ YL PE++ D+
Sbjct: 148 DIKPENLLLGLKGELKIADFGWS---VHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDL 204
Query: 523 YAFGVFMLEVACGRRPVQ 540
+ GV E+ G P +
Sbjct: 205 WCIGVLCYELLVGNPPFE 222
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 102/225 (45%), Gaps = 35/225 (15%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSE--IVSMGKLRHRNLVQL----- 398
+G G VY+G L +AVK S + F++E I + + H N+ +
Sbjct: 23 RGRYGAVYKGSL--DERPVAVKVF---SFANRQNFINEKNIYRVPLMEHDNIARFIVGDE 77
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE---- 454
R + E LLV +Y PNGSL K L +T +W R+ V GL YLH E
Sbjct: 78 RVTADGRMEYLLVMEYYPNGSLXKYLSLHTS---DWVSSCRLAHSVTRGLAYLHTELPRG 134
Query: 455 --WEQVVLHRDIKPANVLLDADLEGKLGDFGLA------RLYDHG-NDLHTTNVVGTVGY 505
++ + HRD+ NVL+ D + DFGL+ RL G D + VGT+ Y
Sbjct: 135 DHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRY 194
Query: 506 LAPELLR---NGRGTTS----TDVYAFGVFMLEVACGRRPVQPGE 543
+APE+L N R S D+YA G+ E+ + PGE
Sbjct: 195 MAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 118/218 (54%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 68 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 123
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + +T VV T+ Y APE
Sbjct: 124 HSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 177
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 214
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH---------DSDHGMKQFVSEIVS- 386
SY + K G G+V + H+E A+K + D + +++F EI +
Sbjct: 37 SYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNE 96
Query: 387 ---MGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIK 442
+ L H N+++L K LV ++ G L ++I+ R + I+K
Sbjct: 97 ISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQII---NRHKFDECDAANIMK 153
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANVLLDAD---LEGKLGDFGLARLYDHGNDLHTTNV 499
+ G+ YLH+ ++HRDIKP N+LL+ L K+ DFGL+ + D +
Sbjct: 154 QILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF--SKDYKLRDR 208
Query: 500 VGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
+GT Y+APE+L+ + DV++ GV M + CG P
Sbjct: 209 LGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 15/207 (7%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDS--DHGMKQFVSEIVSMGKLRHRNL 395
Y+ + K G G+V +H E A+K + S + + E+ + L H N+
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI 98
Query: 396 VQLRGYCRRKGELLLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
++L + K LV + G L D+I++ R N IIK V G+ YLH+
Sbjct: 99 MKLYDFFEDKRNYYLVMECYKGGELFDEIIH---RMKFNEVDAAVIIKQVLSGVTYLHK- 154
Query: 455 WEQVVLHRDIKPANVLLDA---DLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL 511
++HRD+KP N+LL++ D K+ DFGL+ +++ N +GT Y+APE+L
Sbjct: 155 --HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE--NQKKMKERLGTAYYIAPEVL 210
Query: 512 RNGRGTTSTDVYAFGVFMLEVACGRRP 538
R + DV++ GV + + G P
Sbjct: 211 RK-KYDEKCDVWSIGVILFILLAGYPP 236
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 135/304 (44%), Gaps = 41/304 (13%)
Query: 347 GGSGKVYRGV---LPS--SHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQL 398
G G+VY G +P+ S ++AVK +VC + D F+ E + + KL H+N+V+
Sbjct: 42 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE--LDFLMEALIISKLNHQNIVRC 99
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRP------SLNWFQRFRIIKGVAFGLLYLH 452
G + ++ + M G L L TRP SL + + +A G YL
Sbjct: 100 IGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 453 EEWEQVVLHRDIKPANVLLDADLEG---KLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAP 508
E +HRDI N LL G K+GDFG+AR +Y + V ++ P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRL 567
E G T+ TD ++FGV + E+ + G P P + + V+++ G +D
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY-PSKSN--QEVLEFVTSGGRMDPPKNCP 272
Query: 568 EGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSSV---FGVLT 624
+Y ++ C P+ RP+ +++ ++ PD+ +N+++ +G L
Sbjct: 273 GPVY---------RIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV-INTALPIEYGPLV 322
Query: 625 AKNE 628
+ E
Sbjct: 323 EEEE 326
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 135/304 (44%), Gaps = 41/304 (13%)
Query: 347 GGSGKVYRGV---LPS--SHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQL 398
G G+VY G +P+ S ++AVK +VC + D F+ E + + KL H+N+V+
Sbjct: 56 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE--LDFLMEALIISKLNHQNIVRC 113
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRP------SLNWFQRFRIIKGVAFGLLYLH 452
G + ++ + M G L L TRP SL + + +A G YL
Sbjct: 114 IGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 453 EEWEQVVLHRDIKPANVLLDADLEG---KLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAP 508
E +HRDI N LL G K+GDFG+AR +Y + V ++ P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRL 567
E G T+ TD ++FGV + E+ + G P P + + V+++ G +D
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY-PSKSN--QEVLEFVTSGGRMDPPKNCP 286
Query: 568 EGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSSV---FGVLT 624
+Y ++ C P+ RP+ +++ ++ PD+ +N+++ +G L
Sbjct: 287 GPVY---------RIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV-INTALPIEYGPLV 336
Query: 625 AKNE 628
+ E
Sbjct: 337 EEEE 340
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 119/279 (42%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 21 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 80
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L L+ F R I +A L Y H + V
Sbjct: 81 HDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---KRV 132
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ DFG + H ++ GT+ YL PE++
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEK 189
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + + +++ ++ + P + + +
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL 243
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
LK NP RP +R+V+++ P I NSS
Sbjct: 244 LK-------HNPSQRPMLREVLEH-------PWITANSS 268
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 104/226 (46%), Gaps = 31/226 (13%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRH 392
P SY + G G VY+ L S +A+KKV + E+ M KL H
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDH 72
Query: 393 RNLVQLRGYCRRKGE------LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAF 446
N+V+LR + GE L LV DY+P + +Y R + R + V +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVAR----HYSRAKQTLPVIY 123
Query: 447 GLLYLHEEWEQV-------VLHRDIKPANVLLDADLEG-KLGDFGLARLYDHGNDLHTTN 498
LY+++ + + + HRDIKP N+LLD D KL DFG A+ G +
Sbjct: 124 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NVS 181
Query: 499 VVGTVGYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE 543
+ + Y APEL+ T+S DV++ G + E+ G +P+ PG+
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGD 226
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 123/272 (45%), Gaps = 31/272 (11%)
Query: 346 KGGSGKVYRGVLP-----SSHAEIAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRNLVQLR 399
+G G VY GV +A+K V + + +F++E M + ++V+L
Sbjct: 35 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94
Query: 400 GYCRRKGELLLVYDYMPNGSLDKILYSNTRPSL---------NWFQRFRIIKGVAFGLLY 450
G + L++ + M G L L S RP + + + ++ +A G+ Y
Sbjct: 95 GVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 153
Query: 451 LHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAPE 509
L+ +HRD+ N ++ D K+GDFG+ R +Y+ + V +++PE
Sbjct: 154 LNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 210
Query: 510 LLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEG 569
L++G TT +DV++FGV + E+A QP + + V+ + +G +LD D
Sbjct: 211 SLKDGVFTTYSDVWSFGVVLWEIATLAE--QPYQGLSNEQVLRFVMEGGLLDKPD----- 263
Query: 570 IYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVV 601
+++ +L C NP RPS +++
Sbjct: 264 ----NCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 123/272 (45%), Gaps = 31/272 (11%)
Query: 346 KGGSGKVYRGVLP-----SSHAEIAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRNLVQLR 399
+G G VY GV +A+K V + + +F++E M + ++V+L
Sbjct: 57 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 116
Query: 400 GYCRRKGELLLVYDYMPNGSLDKILYSNTRPSL---------NWFQRFRIIKGVAFGLLY 450
G + L++ + M G L L S RP + + + ++ +A G+ Y
Sbjct: 117 GVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 175
Query: 451 LHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAPE 509
L+ +HRD+ N ++ D K+GDFG+ R +Y+ + V +++PE
Sbjct: 176 LNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 232
Query: 510 LLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEG 569
L++G TT +DV++FGV + E+A QP + + V+ + +G +LD D
Sbjct: 233 SLKDGVFTTYSDVWSFGVVLWEIATLAE--QPYQGLSNEQVLRFVMEGGLLDKPD----- 285
Query: 570 IYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVV 601
+++ +L C NP RPS +++
Sbjct: 286 ----NCPDMLFELMRMCWQYNPKMRPSFLEII 313
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 118/279 (42%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 19 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 78
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L L+ F R I +A L Y H + V
Sbjct: 79 HDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---KRV 130
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ DFG + H + GT+ YL PE++
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEK 187
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + + +++ ++ + P + + +
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL 241
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
LK NP RP +R+V+++ P I NSS
Sbjct: 242 LK-------HNPSQRPMLREVLEH-------PWITANSS 266
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 123/272 (45%), Gaps = 31/272 (11%)
Query: 346 KGGSGKVYRGVLP-----SSHAEIAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRNLVQLR 399
+G G VY GV +A+K V + + +F++E M + ++V+L
Sbjct: 28 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 87
Query: 400 GYCRRKGELLLVYDYMPNGSLDKILYSNTRPSL---------NWFQRFRIIKGVAFGLLY 450
G + L++ + M G L L S RP + + + ++ +A G+ Y
Sbjct: 88 GVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 146
Query: 451 LHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAPE 509
L+ +HRD+ N ++ D K+GDFG+ R +Y+ + V +++PE
Sbjct: 147 LNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 203
Query: 510 LLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEG 569
L++G TT +DV++FGV + E+A QP + + V+ + +G +LD D
Sbjct: 204 SLKDGVFTTYSDVWSFGVVLWEIATLAE--QPYQGLSNEQVLRFVMEGGLLDKPD----- 256
Query: 570 IYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVV 601
+++ +L C NP RPS +++
Sbjct: 257 ----NCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 123/272 (45%), Gaps = 31/272 (11%)
Query: 346 KGGSGKVYRGVLP-----SSHAEIAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRNLVQLR 399
+G G VY GV +A+K V + + +F++E M + ++V+L
Sbjct: 29 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 88
Query: 400 GYCRRKGELLLVYDYMPNGSLDKILYSNTRPSL---------NWFQRFRIIKGVAFGLLY 450
G + L++ + M G L L S RP + + + ++ +A G+ Y
Sbjct: 89 GVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 147
Query: 451 LHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAPE 509
L+ +HRD+ N ++ D K+GDFG+ R +Y+ + V +++PE
Sbjct: 148 LNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 204
Query: 510 LLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEG 569
L++G TT +DV++FGV + E+A QP + + V+ + +G +LD D
Sbjct: 205 SLKDGVFTTYSDVWSFGVVLWEIATLAE--QPYQGLSNEQVLRFVMEGGLLDKPD----- 257
Query: 570 IYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVV 601
+++ +L C NP RPS +++
Sbjct: 258 ----NCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 118/279 (42%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 21 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 80
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L L+ F R I +A L Y H + V
Sbjct: 81 HDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---KRV 132
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ DFG + H + GT+ YL PE++
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 189
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + + +++ ++ + P + + +
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL 243
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
LK NP RP +R+V+++ P I NSS
Sbjct: 244 LK-------HNPSQRPMLREVLEH-------PWITANSS 268
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 123/272 (45%), Gaps = 31/272 (11%)
Query: 346 KGGSGKVYRGVLP-----SSHAEIAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRNLVQLR 399
+G G VY GV +A+K V + + +F++E M + ++V+L
Sbjct: 26 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 85
Query: 400 GYCRRKGELLLVYDYMPNGSLDKILYSNTRPSL---------NWFQRFRIIKGVAFGLLY 450
G + L++ + M G L L S RP + + + ++ +A G+ Y
Sbjct: 86 GVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 144
Query: 451 LHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAPE 509
L+ +HRD+ N ++ D K+GDFG+ R +Y+ + V +++PE
Sbjct: 145 LNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 201
Query: 510 LLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEG 569
L++G TT +DV++FGV + E+A QP + + V+ + +G +LD D
Sbjct: 202 SLKDGVFTTYSDVWSFGVVLWEIATLAE--QPYQGLSNEQVLRFVMEGGLLDKPD----- 254
Query: 570 IYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVV 601
+++ +L C NP RPS +++
Sbjct: 255 ----NCPDMLFELMRMCWQYNPKMRPSFLEII 282
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 7/204 (3%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
+ Y K +G SG VY + ++ E+A++++ + ++EI+ M + ++ N
Sbjct: 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
+V EL +V +Y+ GSL ++ T ++ Q + + L +LH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSN 135
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
V+HRDIK N+LL D KL DFG +T +VGT ++APE++
Sbjct: 136 Q---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVVTRK 191
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
D+++ G+ +E+ G P
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 123/272 (45%), Gaps = 31/272 (11%)
Query: 346 KGGSGKVYRGVLP-----SSHAEIAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRNLVQLR 399
+G G VY GV +A+K V + + +F++E M + ++V+L
Sbjct: 22 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 81
Query: 400 GYCRRKGELLLVYDYMPNGSLDKILYSNTRPSL---------NWFQRFRIIKGVAFGLLY 450
G + L++ + M G L L S RP + + + ++ +A G+ Y
Sbjct: 82 GVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 140
Query: 451 LHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAPE 509
L+ +HRD+ N ++ D K+GDFG+ R +Y+ + V +++PE
Sbjct: 141 LNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 197
Query: 510 LLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEG 569
L++G TT +DV++FGV + E+A QP + + V+ + +G +LD D
Sbjct: 198 SLKDGVFTTYSDVWSFGVVLWEIATLAE--QPYQGLSNEQVLRFVMEGGLLDKPD----- 250
Query: 570 IYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVV 601
+++ +L C NP RPS +++
Sbjct: 251 ----NCPDMLFELMRMCWQYNPKMRPSFLEII 278
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 123/272 (45%), Gaps = 31/272 (11%)
Query: 346 KGGSGKVYRGVLP-----SSHAEIAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRNLVQLR 399
+G G VY GV +A+K V + + +F++E M + ++V+L
Sbjct: 28 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 87
Query: 400 GYCRRKGELLLVYDYMPNGSLDKILYSNTRPSL---------NWFQRFRIIKGVAFGLLY 450
G + L++ + M G L L S RP + + + ++ +A G+ Y
Sbjct: 88 GVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 146
Query: 451 LHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAPE 509
L+ +HRD+ N ++ D K+GDFG+ R +Y+ + V +++PE
Sbjct: 147 LNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 203
Query: 510 LLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEG 569
L++G TT +DV++FGV + E+A QP + + V+ + +G +LD D
Sbjct: 204 SLKDGVFTTYSDVWSFGVVLWEIATLAE--QPYQGLSNEQVLRFVMEGGLLDKPD----- 256
Query: 570 IYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVV 601
+++ +L C NP RPS +++
Sbjct: 257 ----NCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 118/279 (42%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 20 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 79
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L L+ F R I +A L Y H + V
Sbjct: 80 HDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---KRV 131
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ DFG + H + GT+ YL PE++
Sbjct: 132 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEK 188
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + + +++ ++ + P + + +
Sbjct: 189 VDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL 242
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
LK NP RP +R+V+++ P I NSS
Sbjct: 243 LK-------HNPSQRPMLREVLEH-------PWITANSS 267
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 104/226 (46%), Gaps = 31/226 (13%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRH 392
P SY + G G VY+ L S +A+KKV + E+ M KL H
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDH 72
Query: 393 RNLVQLRGYCRRKGE------LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAF 446
N+V+LR + GE L LV DY+P + +Y R + R + V +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVAR----HYSRAKQTLPVIY 123
Query: 447 GLLYLHEEWEQV-------VLHRDIKPANVLLDADLEG-KLGDFGLARLYDHGNDLHTTN 498
LY+++ + + + HRDIKP N+LLD D KL DFG A+ G +
Sbjct: 124 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NVS 181
Query: 499 VVGTVGYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE 543
+ + Y APEL+ T+S DV++ G + E+ G +P+ PG+
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGD 226
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 113/217 (52%), Gaps = 17/217 (7%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAF----GLLY 450
+V+L + +L LV++++ + L K + ++ + +IK F GL +
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP----LPLIKSYLFQLLQGLSF 118
Query: 451 LHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPEL 510
H VLHRD+KP N+L++ + KL DFGLAR + +T VV T+ Y APE+
Sbjct: 119 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEI 174
Query: 511 LRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 210
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 31/272 (11%)
Query: 346 KGGSGKVYRGVLP-----SSHAEIAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRNLVQLR 399
+G G VY GV +A+K V + + +F++E M + ++V+L
Sbjct: 22 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 81
Query: 400 GYCRRKGELLLVYDYMPNGSLDKILYSNTRPSL---------NWFQRFRIIKGVAFGLLY 450
G + L++ + M G L L S RP + + + ++ +A G+ Y
Sbjct: 82 GVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 140
Query: 451 LHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAPE 509
L+ +HRD+ N + D K+GDFG+ R +Y+ + V +++PE
Sbjct: 141 LNA---NKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 197
Query: 510 LLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEG 569
L++G TT +DV++FGV + E+A QP + + V+ + +G +LD D
Sbjct: 198 SLKDGVFTTYSDVWSFGVVLWEIATLAE--QPYQGLSNEQVLRFVMEGGLLDKPD----- 250
Query: 570 IYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVV 601
+++L+L C NP RPS +++
Sbjct: 251 ----NCPDMLLELMRMCWQYNPKMRPSFLEII 278
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 103/226 (45%), Gaps = 31/226 (13%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRH 392
P SY + G G VY+ L S +A+KKV + E+ M KL H
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDH 72
Query: 393 RNLVQLRGYCRRKGE------LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAF 446
N+V+LR + GE L LV DY+P +Y R + R + V +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-----ATVYRVAR----HYSRAKQTLPVIY 123
Query: 447 GLLYLHEEWEQV-------VLHRDIKPANVLLDADLEG-KLGDFGLARLYDHGNDLHTTN 498
LY+++ + + + HRDIKP N+LLD D KL DFG A+ G +
Sbjct: 124 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NVS 181
Query: 499 VVGTVGYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE 543
+ + Y APEL+ T+S DV++ G + E+ G +P+ PG+
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGD 226
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 118/279 (42%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 18 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 77
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L L+ F R I +A L Y H + V
Sbjct: 78 HDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---KRV 129
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ DFG + H + GT+ YL PE++
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 186
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + + +++ ++ + P + + +
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL 240
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
LK NP RP +R+V+++ P I NSS
Sbjct: 241 LK-------HNPSQRPMLREVLEH-------PWITANSS 265
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 12/211 (5%)
Query: 332 SPHRFSYKNLYKATKGGSGKVY--RGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGK 389
PH +Y+ L KG KV R +L + + + +++ E+ M
Sbjct: 10 QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 390 LRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQ-RFRIIKGVAFGL 448
L H N+V+L + L LV +Y G + L ++ R + +FR I +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI---VSAV 126
Query: 449 LYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAP 508
Y H+++ ++HRD+K N+LLDAD+ K+ DFG + + GN L G+ Y AP
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL--DEFCGSPPYAAP 181
Query: 509 ELLRNGR-GTTSTDVYAFGVFMLEVACGRRP 538
EL + + DV++ GV + + G P
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 118/221 (53%), Gaps = 19/221 (8%)
Query: 334 HRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLR 391
H +++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L
Sbjct: 2 HMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 392 HRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAF 446
H N+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF 119
Query: 447 GLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYL 506
+ H VLHRD+KP N+L++ + KL DFGLAR + + VV T+ Y
Sbjct: 120 --CHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 171
Query: 507 APELLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
APE+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 211
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 118/279 (42%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 18 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 77
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L L+ F R I +A L Y H + V
Sbjct: 78 HDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---KRV 129
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ DFG + H + GT+ YL PE++
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEK 186
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + + +++ ++ + P + + +
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL 240
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
LK NP RP +R+V+++ P I NSS
Sbjct: 241 LK-------HNPSQRPMLREVLEH-------PWITANSS 265
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
Query: 332 SPHRFSYKNLYKATKGGSGKVY--RGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGK 389
PH +Y+ L KG KV R +L + + + +++ E+ M
Sbjct: 10 QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 390 LRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQ-RFRIIKGVAFGL 448
L H N+V+L + L LV +Y G + L ++ R + +FR I +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI---VSAV 126
Query: 449 LYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAP 508
Y H+++ ++HRD+K N+LLDAD+ K+ DFG + + GN L G Y AP
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA--FCGAPPYAAP 181
Query: 509 ELLRNGR-GTTSTDVYAFGVFMLEVACGRRP 538
EL + + DV++ GV + + G P
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 124/278 (44%), Gaps = 43/278 (15%)
Query: 346 KGGSGKVYRGVLP-----SSHAEIAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRNLVQLR 399
+G G VY GV +A+K V + + +F++E M + ++V+L
Sbjct: 20 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 79
Query: 400 GYCRRKGELLLVYDYMPNGSLDKILYSNTRPSL---------NWFQRFRIIKGVAFGLLY 450
G + L++ + M G L L S RP + + + ++ +A G+ Y
Sbjct: 80 GVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 138
Query: 451 LHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT-------V 503
L+ +HRD+ N ++ D K+GDFG+ R D+ T+ V
Sbjct: 139 LNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR------DIXETDXXRKGGKGLLPV 189
Query: 504 GYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDAS 563
+++PE L++G TT +DV++FGV + E+A QP + + V+ + +G +LD
Sbjct: 190 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE--QPYQGLSNEQVLRFVMEGGLLDKP 247
Query: 564 DPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVV 601
D +++L+L C NP RPS +++
Sbjct: 248 D---------NCPDMLLELMRMCWQYNPKMRPSFLEII 276
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 16/212 (7%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDS--DHGMKQFVSEIVSMGKLRHRNLVQLRGYCR 403
KG G+V + + E AVK + S + + E+ + KL H N+++L
Sbjct: 32 KGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE 91
Query: 404 RKGELLLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHR 462
+V + G L D+I+ R + RIIK V G+ Y+H+ ++HR
Sbjct: 92 DSSSFYIVGELYTGGELFDEII---KRKRFSEHDAARIIKQVFSGITYMHK---HNIVHR 145
Query: 463 DIKPANVLLDA---DLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
D+KP N+LL++ D + K+ DFGL+ + + + +GT Y+APE+LR G
Sbjct: 146 DLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK--DRIGTAYYIAPEVLR-GTYDEK 202
Query: 520 TDVYAFGVFMLEVACGRRPVQ-PGELDLLDWV 550
DV++ GV + + G P E D+L V
Sbjct: 203 CDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 118/279 (42%), Gaps = 37/279 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 21 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 80
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L L+ F R I +A L Y H + V
Sbjct: 81 HDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS---KRV 132
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL + E K+ DFG + H + GT+ YL PE++
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEK 189
Query: 520 TDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIV 579
D+++ GV E G+ P + + +++ ++ + P + + +
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL 243
Query: 580 LKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSS 618
LK NP RP +R+V+++ P I NSS
Sbjct: 244 LK-------HNPSQRPMLREVLEH-------PWITANSS 268
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 379 QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF 438
Q EI LRH N++++ Y + + L+ ++ P G L K L + R + +
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSA 117
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN 498
++ +A L Y HE + V+HRDIKP N+L+ E K+ DFG + H L
Sbjct: 118 TFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRX 171
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ GT+ YL PE++ D++ GV E G P
Sbjct: 172 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 379 QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF 438
Q EI LRH N++++ Y + + L+ ++ P G L K L + R + +
Sbjct: 61 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSA 118
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN 498
++ +A L Y HE + V+HRDIKP N+L+ E K+ DFG + H L
Sbjct: 119 TFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRX 172
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ GT+ YL PE++ D++ GV E G P
Sbjct: 173 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 212
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 379 QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF 438
Q EI LRH N++++ Y + + L+ ++ P G L K L + R + +
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSA 117
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN 498
++ +A L Y HE + V+HRDIKP N+L+ E K+ DFG + H L
Sbjct: 118 TFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRX 171
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ GT+ YL PE++ D++ GV E G P
Sbjct: 172 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 134/304 (44%), Gaps = 41/304 (13%)
Query: 347 GGSGKVYRGV---LPS--SHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQL 398
G G+VY G +P+ S ++AVK +VC + D F+ E + + K H+N+V+
Sbjct: 58 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE--LDFLMEALIISKFNHQNIVRC 115
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRP------SLNWFQRFRIIKGVAFGLLYLH 452
G + ++ + M G L L TRP SL + + +A G YL
Sbjct: 116 IGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 453 EEWEQVVLHRDIKPANVLLDADLEG---KLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAP 508
E +HRDI N LL G K+GDFG+AR +Y + V ++ P
Sbjct: 175 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRL 567
E G T+ TD ++FGV + E+ + G P P + + V+++ G +D
Sbjct: 232 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY-PSKSN--QEVLEFVTSGGRMDPPKNCP 288
Query: 568 EGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSSV---FGVLT 624
+Y ++ C P+ RP+ +++ ++ PD+ +N+++ +G L
Sbjct: 289 GPVY---------RIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV-INTALPIEYGPLV 338
Query: 625 AKNE 628
+ E
Sbjct: 339 EEEE 342
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 134/304 (44%), Gaps = 41/304 (13%)
Query: 347 GGSGKVYRGV---LPS--SHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQL 398
G G+VY G +P+ S ++AVK +VC + D F+ E + + K H+N+V+
Sbjct: 42 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE--LDFLMEALIISKFNHQNIVRC 99
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRP------SLNWFQRFRIIKGVAFGLLYLH 452
G + ++ + M G L L TRP SL + + +A G YL
Sbjct: 100 IGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 453 EEWEQVVLHRDIKPANVLLDADLEG---KLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAP 508
E +HRDI N LL G K+GDFG+AR +Y + V ++ P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRL 567
E G T+ TD ++FGV + E+ + G P P + + V+++ G +D
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY-PSKSN--QEVLEFVTSGGRMDPPKNCP 272
Query: 568 EGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSSV---FGVLT 624
+Y ++ C P+ RP+ +++ ++ PD+ +N+++ +G L
Sbjct: 273 GPVY---------RIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV-INTALPIEYGPLV 322
Query: 625 AKNE 628
+ E
Sbjct: 323 EEEE 326
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 134/304 (44%), Gaps = 41/304 (13%)
Query: 347 GGSGKVYRGV---LPS--SHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQL 398
G G+VY G +P+ S ++AVK +VC + D F+ E + + K H+N+V+
Sbjct: 68 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE--LDFLMEALIISKFNHQNIVRC 125
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRP------SLNWFQRFRIIKGVAFGLLYLH 452
G + ++ + M G L L TRP SL + + +A G YL
Sbjct: 126 IGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 453 EEWEQVVLHRDIKPANVLLDADLEG---KLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAP 508
E +HRDI N LL G K+GDFG+AR +Y + V ++ P
Sbjct: 185 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRL 567
E G T+ TD ++FGV + E+ + G P P + + V+++ G +D
Sbjct: 242 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY-PSKSN--QEVLEFVTSGGRMDPPKNCP 298
Query: 568 EGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSSV---FGVLT 624
+Y ++ C P+ RP+ +++ ++ PD+ +N+++ +G L
Sbjct: 299 GPVY---------RIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV-INTALPIEYGPLV 348
Query: 625 AKNE 628
+ E
Sbjct: 349 EEEE 352
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 134/304 (44%), Gaps = 41/304 (13%)
Query: 347 GGSGKVYRGV---LPS--SHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQL 398
G G+VY G +P+ S ++AVK +VC + D F+ E + + K H+N+V+
Sbjct: 56 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE--LDFLMEALIISKFNHQNIVRC 113
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRP------SLNWFQRFRIIKGVAFGLLYLH 452
G + ++ + M G L L TRP SL + + +A G YL
Sbjct: 114 IGVSLQSLPRFILMELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 453 EEWEQVVLHRDIKPANVLLDADLEG---KLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAP 508
E +HRDI N LL G K+GDFG+AR +Y + V ++ P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRL 567
E G T+ TD ++FGV + E+ + G P P + + V+++ G +D
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY-PSKSN--QEVLEFVTSGGRMDPPKNCP 286
Query: 568 EGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSSV---FGVLT 624
+Y ++ C P+ RP+ +++ ++ PD+ +N+++ +G L
Sbjct: 287 GPVY---------RIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV-INTALPIEYGPLV 336
Query: 625 AKNE 628
+ E
Sbjct: 337 EEEE 340
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 114/221 (51%), Gaps = 25/221 (11%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 395 LVQLRGYCRRKGELLLVYD--------YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAF 446
+V+L + +L LV++ +M +L I + L F++++G+AF
Sbjct: 63 IVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYL-----FQLLQGLAF 117
Query: 447 GLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYL 506
+ H VLHRD+KP N+L++ + KL DFGLAR + +T VV T+ Y
Sbjct: 118 --CHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYR 169
Query: 507 APELLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
APE+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 209
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 134/304 (44%), Gaps = 41/304 (13%)
Query: 347 GGSGKVYRGV---LPS--SHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQL 398
G G+VY G +P+ S ++AVK +VC + D F+ E + + K H+N+V+
Sbjct: 48 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE--LDFLMEALIISKFNHQNIVRC 105
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRP------SLNWFQRFRIIKGVAFGLLYLH 452
G + ++ + M G L L TRP SL + + +A G YL
Sbjct: 106 IGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 453 EEWEQVVLHRDIKPANVLLDADLEG---KLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAP 508
E +HRDI N LL G K+GDFG+AR +Y + V ++ P
Sbjct: 165 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRL 567
E G T+ TD ++FGV + E+ + G P P + + V+++ G +D
Sbjct: 222 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY-PSKSN--QEVLEFVTSGGRMDPPKNCP 278
Query: 568 EGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSSV---FGVLT 624
+Y ++ C P+ RP+ +++ ++ PD+ +N+++ +G L
Sbjct: 279 GPVY---------RIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV-INTALPIEYGPLV 328
Query: 625 AKNE 628
+ E
Sbjct: 329 EEEE 332
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 127/271 (46%), Gaps = 28/271 (10%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKV-CHDSDHGMKQFVSEIVSMGKLRHRNLV 396
+ L + KG G+VY+G+ + +A+K + +++ ++ EI + + +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 397 QLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWE 456
+ G + +L ++ +Y+ GS +L L I++ + GL YLH E +
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPG---PLEETYIATILREILKGLDYLHSERK 137
Query: 457 QVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTTNVVGTVGYLAPELLRNGR 515
+HRDIK ANVLL + KL DFG+A +L D + VGT ++APE+++
Sbjct: 138 ---IHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVIKQSA 192
Query: 516 GTTSTDVYAFGVFMLEVACGRRP---VQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYV 572
D+++ G+ +E+A G P + P + L + S P LEG +
Sbjct: 193 YDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFL-----------IPKNSPPTLEGQHS 241
Query: 573 EEQMEIVLKLGLFCSHSNPDTRPSMRQVVQY 603
+ E V C + +P RP+ ++++++
Sbjct: 242 KPFKEFVEA----CLNKDPRFRPTAKELLKH 268
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 134/304 (44%), Gaps = 41/304 (13%)
Query: 347 GGSGKVYRGV---LPS--SHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQL 398
G G+VY G +P+ S ++AVK +VC + D F+ E + + K H+N+V+
Sbjct: 41 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE--LDFLMEALIISKFNHQNIVRC 98
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRP------SLNWFQRFRIIKGVAFGLLYLH 452
G + ++ + M G L L TRP SL + + +A G YL
Sbjct: 99 IGVSLQSLPRFILMELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 453 EEWEQVVLHRDIKPANVLLDADLEG---KLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAP 508
E +HRDI N LL G K+GDFG+AR +Y + V ++ P
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRL 567
E G T+ TD ++FGV + E+ + G P P + + V+++ G +D
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY-PSKSN--QEVLEFVTSGGRMDPPKNCP 271
Query: 568 EGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSSV---FGVLT 624
+Y ++ C P+ RP+ +++ ++ PD+ +N+++ +G L
Sbjct: 272 GPVY---------RIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV-INTALPIEYGPLV 321
Query: 625 AKNE 628
+ E
Sbjct: 322 EEEE 325
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 117/218 (53%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 119
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + + VV T+ Y APE
Sbjct: 120 HSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 210
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 110/229 (48%), Gaps = 26/229 (11%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G +G+V V + +AVK K D +K+ EI L H N+V+ G+
Sbjct: 16 EGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGH 72
Query: 402 CRRKGEL-LLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
RR+G + L +Y G L D+I P + QRF + G++YLH +
Sbjct: 73 -RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRF--FHQLMAGVVYLHG---IGI 125
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAPELL-RNGRGT 517
HRDIKP N+LLD K+ DFGLA ++ + N N + GT+ Y+APELL R
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 518 TSTDVYAFGVFMLEVACGRRPV-QPGE--LDLLDW-----VIDYWQKGD 558
DV++ G+ + + G P QP + + DW ++ W+K D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 234
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 134/304 (44%), Gaps = 41/304 (13%)
Query: 347 GGSGKVYRGV---LPS--SHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQL 398
G G+VY G +P+ S ++AVK +VC + D F+ E + + K H+N+V+
Sbjct: 41 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE--LDFLMEALIISKFNHQNIVRC 98
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRP------SLNWFQRFRIIKGVAFGLLYLH 452
G + ++ + M G L L TRP SL + + +A G YL
Sbjct: 99 IGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 453 EEWEQVVLHRDIKPANVLLDADLEG---KLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAP 508
E +HRDI N LL G K+GDFG+AR +Y + V ++ P
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRL 567
E G T+ TD ++FGV + E+ + G P P + + V+++ G +D
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY-PSKSN--QEVLEFVTSGGRMDPPKNCP 271
Query: 568 EGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSSV---FGVLT 624
+Y ++ C P+ RP+ +++ ++ PD+ +N+++ +G L
Sbjct: 272 GPVY---------RIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV-INTALPIEYGPLV 321
Query: 625 AKNE 628
+ E
Sbjct: 322 EEEE 325
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 113/221 (51%), Gaps = 25/221 (11%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 395 LVQLRGYCRRKGELLLVY--------DYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAF 446
+V+L + +L LV+ D+M +L I + L F++++G+AF
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYL-----FQLLQGLAF 121
Query: 447 GLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYL 506
+ H VLHRD+KP N+L++ + KL DFGLAR + + VV T+ Y
Sbjct: 122 --CHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 173
Query: 507 APELLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
APE+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 213
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC--- 402
KG G+V+RG+ H E K+ D +EI + LRH N++ G+
Sbjct: 18 KGRYGEVWRGLW---HGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNIL---GFIASD 71
Query: 403 ----RRKGELLLVYDYMPNGSLDKILYSNT-RPSLNWFQRFRIIKGVAFGLLYLHEEW-- 455
+L L+ Y +GSL L T P L R+ A GL +LH E
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA----LRLAVSAACGLAHLHVEIFG 127
Query: 456 ---EQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGN---DLHTTNVVGTVGYLAPE 509
+ + HRD K NVL+ ++L+ + D GLA ++ G+ D+ VGT Y+APE
Sbjct: 128 TQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPE 187
Query: 510 LLRNGRGTTS------TDVYAFGVFMLEVACGRRPVQPG 542
+L T TD++AFG+ + E+A RR + G
Sbjct: 188 VLDEQIRTDCFESYKWTDIWAFGLVLWEIA--RRTIVNG 224
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 113/221 (51%), Gaps = 25/221 (11%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 395 LVQLRGYCRRKGELLLVY--------DYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAF 446
+V+L + +L LV+ D+M +L I + L F++++G+AF
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYL-----FQLLQGLAF 120
Query: 447 GLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYL 506
+ H VLHRD+KP N+L++ + KL DFGLAR + + VV T+ Y
Sbjct: 121 --CHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 172
Query: 507 APELLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
APE+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 212
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 117/218 (53%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 119
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + + VV T+ Y APE
Sbjct: 120 HSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 210
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 117/218 (53%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 119
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + + VV T+ Y APE
Sbjct: 120 HSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 210
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 117/218 (53%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 121
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + + VV T+ Y APE
Sbjct: 122 HSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 212
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 117/218 (53%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 118
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + + VV T+ Y APE
Sbjct: 119 HSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 172
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 209
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 117/218 (53%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 68 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 123
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + + VV T+ Y APE
Sbjct: 124 HSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 177
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 214
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 123/278 (44%), Gaps = 43/278 (15%)
Query: 346 KGGSGKVYRGVLP-----SSHAEIAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRNLVQLR 399
+G G VY GV +A+K V + + +F++E M + ++V+L
Sbjct: 29 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 88
Query: 400 GYCRRKGELLLVYDYMPNGSLDKILYSNTRPSL---------NWFQRFRIIKGVAFGLLY 450
G + L++ + M G L L S RP + + + ++ +A G+ Y
Sbjct: 89 GVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 147
Query: 451 LHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG------ 504
L+ +HRD+ N ++ D K+GDFG+ R D+ T+ G
Sbjct: 148 LNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR------DIXETDXXRKGGKGLLPV 198
Query: 505 -YLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDAS 563
+++PE L++G TT +DV++FGV + E+A QP + + V+ + +G +LD
Sbjct: 199 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE--QPYQGLSNEQVLRFVMEGGLLDKP 256
Query: 564 DPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVV 601
D +++ +L C NP RPS +++
Sbjct: 257 D---------NCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 113/221 (51%), Gaps = 25/221 (11%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 395 LVQLRGYCRRKGELLLVY--------DYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAF 446
+V+L + +L LV+ D+M +L I + L F++++G+AF
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYL-----FQLLQGLAF 118
Query: 447 GLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYL 506
+ H VLHRD+KP N+L++ + KL DFGLAR + + VV T+ Y
Sbjct: 119 --CHSHR-----VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 170
Query: 507 APELLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
APE+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 210
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R S + L +G G V++ L + + + + D Q EI S ++H N
Sbjct: 14 RGSLQLLEIKARGRFGCVWKAQLMNDFVAVKIFPL---QDKQSWQSEREIFSTPGMKHEN 70
Query: 395 LVQLRGYCRR----KGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLY 450
L+Q +R + EL L+ + GSL L N + W + + + ++ GL Y
Sbjct: 71 LLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNI---ITWNELCHVAETMSRGLSY 127
Query: 451 LHEE--W------EQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGN---DLHTTNV 499
LHE+ W + + HRD K NVLL +DL L DFGLA ++ G D H
Sbjct: 128 LHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQ-- 185
Query: 500 VGTVGYLAPELLRNG-----RGTTSTDVYAFGVFMLEV 532
VGT Y+APE+L D+YA G+ + E+
Sbjct: 186 VGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 223
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 117/218 (53%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 122
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + + VV T+ Y APE
Sbjct: 123 HSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 213
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 117/218 (53%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+ K+ D++ G+ + EI + +L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 119
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + +T VV T+ Y APE
Sbjct: 120 HSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 173
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 210
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 117/218 (53%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+ K+ D++ G+ + EI + +L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 118
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + +T VV T+ Y APE
Sbjct: 119 HSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 172
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 209
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 117/218 (53%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 122
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + + VV T+ Y APE
Sbjct: 123 HSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 213
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 117/218 (53%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 121
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + + VV T+ Y APE
Sbjct: 122 HSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 212
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 117/218 (53%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 121
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + + VV T+ Y APE
Sbjct: 122 HSHR-----VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 212
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIK 442
EI ++ RH ++++L + +V +Y+ G L + + R + + R+ +
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQ 118
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT 502
+ + Y H +V+HRD+KP NVLLDA + K+ DFGL+ + G L T+ G+
Sbjct: 119 QILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGS 173
Query: 503 VGYLAPELLRNGR--GTTSTDVYAFGVFMLEVACGRRP 538
Y APE++ +GR D+++ GV + + CG P
Sbjct: 174 PNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 117/218 (53%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 120
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + + VV T+ Y APE
Sbjct: 121 HSHR-----VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 174
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 211
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 117/218 (53%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 122
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + + VV T+ Y APE
Sbjct: 123 HSHR-----VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 213
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 117/218 (53%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 118
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + + VV T+ Y APE
Sbjct: 119 HSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 172
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 209
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 7/204 (3%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
+ Y K +G SG VY + ++ E+A++++ + ++EI+ M + ++ N
Sbjct: 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
+V EL +V +Y+ GSL ++ T ++ Q + + L +LH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSN 135
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
V+HRDIK N+LL D KL DFG + +VGT ++APE++
Sbjct: 136 Q---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KRSEMVGTPYWMAPEVVTRK 191
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
D+++ G+ +E+ G P
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 117/218 (53%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 119
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + + VV T+ Y APE
Sbjct: 120 HSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 210
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 117/218 (53%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 120
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + + VV T+ Y APE
Sbjct: 121 HSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 174
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 211
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 16/212 (7%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDS--DHGMKQFVSEIVSMGKLRHRNLVQLRGYCR 403
KG G+V + + E AVK + S + + E+ + KL H N+++L
Sbjct: 32 KGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE 91
Query: 404 RKGELLLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHR 462
+V + G L D+I+ R + RIIK V G+ Y+H+ ++HR
Sbjct: 92 DSSSFYIVGELYTGGELFDEII---KRKRFSEHDAARIIKQVFSGITYMHK---HNIVHR 145
Query: 463 DIKPANVLLDA---DLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
D+KP N+LL++ D + K+ DFGL+ + + + +GT Y+APE+LR G
Sbjct: 146 DLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK--DRIGTAYYIAPEVLR-GTYDEK 202
Query: 520 TDVYAFGVFMLEVACGRRPVQ-PGELDLLDWV 550
DV++ GV + + G P E D+L V
Sbjct: 203 CDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 117/218 (53%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 120
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + + VV T+ Y APE
Sbjct: 121 HSHR-----VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 174
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 211
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 347 GGSGKVYRGV---LPS--SHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQL 398
G G+VY G +P+ S ++AVK +VC + D F+ E + + K H+N+V+
Sbjct: 33 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE--LDFLMEALIISKFNHQNIVRC 90
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRP------SLNWFQRFRIIKGVAFGLLYLH 452
G + ++ + M G L L TRP SL + + +A G YL
Sbjct: 91 IGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 453 EEWEQVVLHRDIKPANVLLDADLEG---KLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAP 508
E +HRDI N LL G K+GDFG+AR +Y + V ++ P
Sbjct: 150 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEV 532
E G T+ TD ++FGV + E+
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEI 230
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 16/212 (7%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDS--DHGMKQFVSEIVSMGKLRHRNLVQLRGYCR 403
KG G+V + + E AVK + S + + E+ + KL H N+++L
Sbjct: 32 KGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE 91
Query: 404 RKGELLLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHR 462
+V + G L D+I+ R + RIIK V G+ Y+H+ ++HR
Sbjct: 92 DSSSFYIVGELYTGGELFDEII---KRKRFSEHDAARIIKQVFSGITYMHK---HNIVHR 145
Query: 463 DIKPANVLLDA---DLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
D+KP N+LL++ D + K+ DFGL+ + + + +GT Y+APE+LR G
Sbjct: 146 DLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK--DRIGTAYYIAPEVLR-GTYDEK 202
Query: 520 TDVYAFGVFMLEVACGRRPVQ-PGELDLLDWV 550
DV++ GV + + G P E D+L V
Sbjct: 203 CDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 132/307 (42%), Gaps = 59/307 (19%)
Query: 342 YKATKGGSGKVY----RGVLPSSHAE-IAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLV 396
++ +G GKV+ +LP +AVK + S+ + F E + L+H+++V
Sbjct: 47 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIV 106
Query: 397 QLRGYCRRKGELLLVYDYMPNGSLDKILYS------------NTRPS-LNWFQRFRIIKG 443
+ G C LL+V++YM +G L++ L S + P L Q +
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 444 VAFGLLY---LHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVV 500
VA G++Y LH +HRD+ N L+ L K+GDFG++R D+++T+
Sbjct: 167 VAAGMVYLAGLH------FVHRDLATRNCLVGQGLVVKIGDFGMSR------DIYSTDYY 214
Query: 501 GTVG-------YLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVID 552
G ++ PE + + TT +DV++FGV + E+ G++P
Sbjct: 215 RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP-------------- 260
Query: 553 YWQKGDVLDASDPRLEGIYVEEQMEI---VLKLGLFCSHSNPDTRPSMRQVVQYLDGGAL 609
W + +A D +G +E V + C P R S++ V L A
Sbjct: 261 -WYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319
Query: 610 LPDIPLN 616
P + L+
Sbjct: 320 APPVYLD 326
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
KG G VY S +A+K K + Q E+ LRH N+++L GY
Sbjct: 22 KGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 81
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRI---IKGVAFGLLYLHEEWEQVV 459
+ L+ +Y P G++ + L +R F R I +A L Y H + V
Sbjct: 82 HDATRVYLILEYAPLGTVYRELQKLSR-----FDEQRTATYITELANALSYCHS---KRV 133
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIKP N+LL ++ E K+ DFG + H + GT+ YL PE++
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEK 190
Query: 520 TDVYAFGVFMLEVACGRRPVQ 540
D+++ GV E G P +
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFE 211
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 109/229 (47%), Gaps = 26/229 (11%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G+V V + +AVK K D +K+ EI L H N+V+ G+
Sbjct: 17 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGH 73
Query: 402 CRRKGEL-LLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
RR+G + L +Y G L D+I P + QRF + G++YLH +
Sbjct: 74 -RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRF--FHQLMAGVVYLHG---IGI 126
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAPELL-RNGRGT 517
HRDIKP N+LLD K+ DFGLA ++ + N N + GT+ Y+APELL R
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 518 TSTDVYAFGVFMLEVACGRRPV-QPGE--LDLLDW-----VIDYWQKGD 558
DV++ G+ + + G P QP + + DW ++ W+K D
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 235
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 7/204 (3%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
+ Y K +G SG VY + ++ E+A++++ + ++EI+ M + ++ N
Sbjct: 20 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
+V EL +V +Y+ GSL ++ T ++ Q + + L +LH
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSN 136
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
V+HRDIK N+LL D KL DFG + +VGT ++APE++
Sbjct: 137 Q---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KRSXMVGTPYWMAPEVVTRK 192
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
D+++ G+ +E+ G P
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 7/204 (3%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
+ Y K +G SG VY + ++ E+A++++ + ++EI+ M + ++ N
Sbjct: 20 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
+V EL +V +Y+ GSL ++ T ++ Q + + L +LH
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSN 136
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
V+HR+IK N+LL D KL DFG +T +VGT ++APE++
Sbjct: 137 Q---VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVVTRK 192
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
D+++ G+ +E+ G P
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 109/229 (47%), Gaps = 26/229 (11%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G+V V + +AVK K D +K+ EI L H N+V+ G+
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGH 72
Query: 402 CRRKGEL-LLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
RR+G + L +Y G L D+I P + QRF + G++YLH +
Sbjct: 73 -RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRF--FHQLMAGVVYLHG---IGI 125
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAPELL-RNGRGT 517
HRDIKP N+LLD K+ DFGLA ++ + N N + GT+ Y+APELL R
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 518 TSTDVYAFGVFMLEVACGRRPV-QPGE--LDLLDW-----VIDYWQKGD 558
DV++ G+ + + G P QP + + DW ++ W+K D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 234
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 7/204 (3%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
+ Y K +G SG VY + ++ E+A++++ + ++EI+ M + ++ N
Sbjct: 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
+V EL +V +Y+ GSL ++ T ++ Q + + L +LH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSN 135
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
V+HRDIK N+LL D KL DFG + +VGT ++APE++
Sbjct: 136 Q---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KRSXMVGTPYWMAPEVVTRK 191
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
D+++ G+ +E+ G P
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G+V V + +AVK K D +K+ EI L H N+V+ G+
Sbjct: 17 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINAMLNHENVVKFYGH 73
Query: 402 CRRKGEL-LLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
RR+G + L +Y G L D+I P + QRF + G++YLH +
Sbjct: 74 -RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRF--FHQLMAGVVYLHG---IGI 126
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAPELL-RNGRGT 517
HRDIKP N+LLD K+ DFGLA ++ + N N + GT+ Y+APELL R
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 518 TSTDVYAFGVFMLEVACGRRP 538
DV++ G+ + + G P
Sbjct: 187 EPVDVWSCGIVLTAMLAGELP 207
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 126/266 (47%), Gaps = 28/266 (10%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G GKVY+ + A A K + S+ ++ ++ EI + H +V+L G G
Sbjct: 22 GAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDG 81
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
+L ++ ++ P G++D I+ R L Q + + + L +LH + ++HRD+K
Sbjct: 82 KLWIMIEFCPGGAVDAIMLELDR-GLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKA 137
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHT----TNVVGTVGYLAPEL-----LRNGRGT 517
NVL+ + + +L DFG++ +L T + +GT ++APE+ +++
Sbjct: 138 GNVLMTLEGDIRLADFGVS-----AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 192
Query: 518 TSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQME 577
D+++ G+ ++E+A P EL+ + ++ K D P + + ++
Sbjct: 193 YKADIWSLGITLIEMAQIEPPHH--ELNPMRVLLKI-AKSDPPTLLTPSKWSVEFRDFLK 249
Query: 578 IVLKLGLFCSHSNPDTRPSMRQVVQY 603
I L NP+TRPS Q++++
Sbjct: 250 IALD-------KNPETRPSAAQLLEH 268
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 112/225 (49%), Gaps = 28/225 (12%)
Query: 338 YKNLYKATKGGSGKVYRGV-LPSSHAEIAVKKV-CHDSDHGMKQFVSEIVSMGKLRHR-- 393
Y+ + + +G GKV++ L + +A+K+V + GM +S I + LRH
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMP--LSTIREVAVLRHLET 70
Query: 394 ----NLVQLRGYCR-----RKGELLLVYDYMPNG---SLDKILYSNTRPSLNWFQRFRII 441
N+V+L C R+ +L LV++++ LDK+ F+++
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 442 KGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVG 501
+G+ F L+ H V+HRD+KP N+L+ + + KL DFGLAR+Y L T+VV
Sbjct: 131 RGLDF--LHSHR-----VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--TSVVV 181
Query: 502 TVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
T+ Y APE+L T D+++ G E+ R+P+ G D+
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKPLFRGSSDV 225
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 134/296 (45%), Gaps = 43/296 (14%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGM--KQFVSEIVSMGKLRHRN 394
Y+ + K +G G V++ + +A+KK D + K + EI + +L+H N
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPN 63
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQR---FRIIKGVAFGLL-- 449
LV L RRK L LV++Y + L + L+ +QR ++K + + L
Sbjct: 64 LVNLLEVFRRKRRLHLVFEYCDHTVLHE---------LDRYQRGVPEHLVKSITWQTLQA 114
Query: 450 --YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLA 507
+ H+ +HRD+KP N+L+ KL DFG ARL +D + V T Y +
Sbjct: 115 VNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE-VATRWYRS 170
Query: 508 PELLR-NGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLD----- 561
PELL + + DV+A G E+ G P+ PG+ D+ + GD++
Sbjct: 171 PELLVGDTQYGPPVDVWAIGCVFAELLSG-VPLWPGKSDVDQLYLIRKTLGDLIPRHQQV 229
Query: 562 -ASDPRLEGIYV--EEQME-IVLK--------LGLF--CSHSNPDTRPSMRQVVQY 603
+++ G+ + E ME + LK LGL C H +P R + Q++ +
Sbjct: 230 FSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 112/226 (49%), Gaps = 28/226 (12%)
Query: 337 SYKNLYKATKGGSGKVYRGV-LPSSHAEIAVKKV-CHDSDHGMKQFVSEIVSMGKLRHR- 393
Y+ + + +G GKV++ L + +A+K+V + GM +S I + LRH
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMP--LSTIREVAVLRHLE 69
Query: 394 -----NLVQLRGYCR-----RKGELLLVYDYMPNG---SLDKILYSNTRPSLNWFQRFRI 440
N+V+L C R+ +L LV++++ LDK+ F++
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 441 IKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVV 500
++G+ F L+ H V+HRD+KP N+L+ + + KL DFGLAR+Y L T+VV
Sbjct: 130 LRGLDF--LHSHR-----VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--TSVV 180
Query: 501 GTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
T+ Y APE+L T D+++ G E+ R+P+ G D+
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKPLFRGSSDV 225
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 117/218 (53%), Gaps = 19/218 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQRFRIIKGVAFGLL 449
+V+L + +L LV++++ + L K + ++ P + + F++++G+AF
Sbjct: 67 IVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF--C 122
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
+ H VLHRD+KP N+L++ + KL DFGLAR + + VV T+ Y APE
Sbjct: 123 HSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 510 LLRNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+L + +T+ D+++ G E+ RR + PG+ ++
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 213
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 38/217 (17%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRH------------- 392
+G G+V + A+KK+ H ++ + +SE++ + L H
Sbjct: 16 QGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVRYYAAWLER 74
Query: 393 RNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYS---NTRPSLNWFQRFRIIKGVAFGLL 449
RN V+ ++K L + +Y N +L +++S N + W R+ + + L
Sbjct: 75 RNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW----RLFRQILEALS 130
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDL-------------HT 496
Y+H Q ++HRD+KP N+ +D K+GDFGLA+ D+ +
Sbjct: 131 YIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 497 TNVVGTVGYLAPELLR-NGRGTTSTDVYAFGVFMLEV 532
T+ +GT Y+A E+L G D+Y+ G+ E+
Sbjct: 188 TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 98/196 (50%), Gaps = 12/196 (6%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G G+V++ ++ ++A K + ++ +EI M +L H NL+QL K
Sbjct: 100 GRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKN 159
Query: 407 ELLLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIK 465
+++LV +Y+ G L D+I+ + +L +K + G+ ++H+ + +LH D+K
Sbjct: 160 DIVLVMEYVDGGELFDRII--DESYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLK 214
Query: 466 PANVLL---DADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDV 522
P N+L DA + K+ DFGLAR Y L GT +LAPE++ + TD+
Sbjct: 215 PENILCVNRDAK-QIKIIDFGLARRYKPREKLKVN--FGTPEFLAPEVVNYDFVSFPTDM 271
Query: 523 YAFGVFMLEVACGRRP 538
++ GV + G P
Sbjct: 272 WSVGVIAYMLLSGLSP 287
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G+V V + +AVK K D +K+ EI L H N+V+ G+
Sbjct: 17 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGH 73
Query: 402 CRRKGEL-LLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
RR+G + L +Y G L D+I P + QRF + G++YLH +
Sbjct: 74 -RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRF--FHQLMAGVVYLHG---IGI 126
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAPELL-RNGRGT 517
HRDIKP N+LLD K+ DFGLA ++ + N N + GT+ Y+APELL R
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 518 TSTDVYAFGVFMLEVACGRRP 538
DV++ G+ + + G P
Sbjct: 187 EPVDVWSCGIVLTAMLAGELP 207
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 132/307 (42%), Gaps = 59/307 (19%)
Query: 342 YKATKGGSGKVY----RGVLPSSHAE-IAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLV 396
++ +G GKV+ +LP +AVK + S+ + F E + L+H+++V
Sbjct: 24 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIV 83
Query: 397 QLRGYCRRKGELLLVYDYMPNGSLDKILYS------------NTRPS-LNWFQRFRIIKG 443
+ G C LL+V++YM +G L++ L S + P L Q +
Sbjct: 84 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 444 VAFGLLY---LHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVV 500
VA G++Y LH +HRD+ N L+ L K+GDFG++R D+++T+
Sbjct: 144 VAAGMVYLAGLH------FVHRDLATRNCLVGQGLVVKIGDFGMSR------DIYSTDYY 191
Query: 501 GTVG-------YLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVID 552
G ++ PE + + TT +DV++FGV + E+ G++P
Sbjct: 192 RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP-------------- 237
Query: 553 YWQKGDVLDASDPRLEGIYVEEQMEI---VLKLGLFCSHSNPDTRPSMRQVVQYLDGGAL 609
W + +A D +G +E V + C P R S++ V L A
Sbjct: 238 -WYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 296
Query: 610 LPDIPLN 616
P + L+
Sbjct: 297 APPVYLD 303
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 99/199 (49%), Gaps = 16/199 (8%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G GKV + ++A+K ++ SD M+ EI + LRH ++++L
Sbjct: 19 EGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMR-VEREISYLKLLRHPHIIKLYDV 77
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
++++V +Y G L + R + + +RF + + + Y H ++H
Sbjct: 78 ITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRF--FQQIICAIEYCHR---HKIVH 131
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR--GTTS 519
RD+KP N+LLD +L K+ DFGL+ + GN L T+ G+ Y APE++ NG+
Sbjct: 132 RDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVI-NGKLYAGPE 188
Query: 520 TDVYAFGVFMLEVACGRRP 538
DV++ G+ + + GR P
Sbjct: 189 VDVWSCGIVLYVMLVGRLP 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G+V V + +AVK K D +K+ EI L H N+V+ G+
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGH 72
Query: 402 CRRKGEL-LLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
RR+G + L +Y G L D+I P + QRF + G++YLH +
Sbjct: 73 -RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRF--FHQLMAGVVYLHG---IGI 125
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAPELL-RNGRGT 517
HRDIKP N+LLD K+ DFGLA ++ + N N + GT+ Y+APELL R
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 518 TSTDVYAFGVFMLEVACGRRP 538
DV++ G+ + + G P
Sbjct: 186 EPVDVWSCGIVLTAMLAGELP 206
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 126/266 (47%), Gaps = 28/266 (10%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G GKVY+ + A A K + S+ ++ ++ EI + H +V+L G G
Sbjct: 30 GAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDG 89
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
+L ++ ++ P G++D I+ R L Q + + + L +LH + ++HRD+K
Sbjct: 90 KLWIMIEFCPGGAVDAIMLELDR-GLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKA 145
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHT----TNVVGTVGYLAPEL-----LRNGRGT 517
NVL+ + + +L DFG++ +L T + +GT ++APE+ +++
Sbjct: 146 GNVLMTLEGDIRLADFGVS-----AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 200
Query: 518 TSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQME 577
D+++ G+ ++E+A P EL+ + ++ K D P + + ++
Sbjct: 201 YKADIWSLGITLIEMAQIEPPHH--ELNPMRVLLKI-AKSDPPTLLTPSKWSVEFRDFLK 257
Query: 578 IVLKLGLFCSHSNPDTRPSMRQVVQY 603
I L NP+TRPS Q++++
Sbjct: 258 IAL-------DKNPETRPSAAQLLEH 276
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 132/307 (42%), Gaps = 59/307 (19%)
Query: 342 YKATKGGSGKVY----RGVLPSSHAE-IAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLV 396
++ +G GKV+ +LP +AVK + S+ + F E + L+H+++V
Sbjct: 18 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIV 77
Query: 397 QLRGYCRRKGELLLVYDYMPNGSLDKILYS------------NTRPS-LNWFQRFRIIKG 443
+ G C LL+V++YM +G L++ L S + P L Q +
Sbjct: 78 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 444 VAFGLLY---LHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVV 500
VA G++Y LH +HRD+ N L+ L K+GDFG++R D+++T+
Sbjct: 138 VAAGMVYLAGLH------FVHRDLATRNCLVGQGLVVKIGDFGMSR------DIYSTDYY 185
Query: 501 GTVG-------YLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVID 552
G ++ PE + + TT +DV++FGV + E+ G++P
Sbjct: 186 RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP-------------- 231
Query: 553 YWQKGDVLDASDPRLEGIYVEEQMEI---VLKLGLFCSHSNPDTRPSMRQVVQYLDGGAL 609
W + +A D +G +E V + C P R S++ V L A
Sbjct: 232 -WYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 290
Query: 610 LPDIPLN 616
P + L+
Sbjct: 291 APPVYLD 297
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G+V V + +AVK K D +K+ EI L H N+V+ G+
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGH 72
Query: 402 CRRKGEL-LLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
RR+G + L +Y G L D+I P + QRF + G++YLH +
Sbjct: 73 -RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRF--FHQLMAGVVYLHG---IGI 125
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAPELL-RNGRGT 517
HRDIKP N+LLD K+ DFGLA ++ + N N + GT+ Y+APELL R
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 518 TSTDVYAFGVFMLEVACGRRP 538
DV++ G+ + + G P
Sbjct: 186 EPVDVWSCGIVLTAMLAGELP 206
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
Query: 332 SPHRFSYKNLYKATKGGSGKVY--RGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGK 389
PH +Y+ KG KV R VL + + + +++ E+ M
Sbjct: 11 QPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKI 70
Query: 390 LRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQ-RFRIIKGVAFGL 448
L H N+V+L + L LV +Y G + L ++ R + +FR I +
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI---VSAV 127
Query: 449 LYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAP 508
Y H+++ ++HRD+K N+LLD D+ K+ DFG + + GN L T G+ Y AP
Sbjct: 128 QYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT--FCGSPPYAAP 182
Query: 509 ELLRNGR-GTTSTDVYAFGVFMLEVACGRRP 538
EL + + DV++ GV + + G P
Sbjct: 183 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Query: 340 NLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLR 399
N K +G +G V + SS +AVKK+ + +E+V M +H N+V++
Sbjct: 24 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY 83
Query: 400 GYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
EL +V +++ G+L I+ ++TR +N Q + V L LH Q V
Sbjct: 84 NSYLVGDELWVVMEFLEGGALTDIV-THTR--MNEEQIAAVCLAVLQALSVLH---AQGV 137
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIK ++LL D KL DFG +VGT ++APEL+
Sbjct: 138 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRKXLVGTPYWMAPELISRLPYGPE 196
Query: 520 TDVYAFGVFMLEVACGRRP 538
D+++ G+ ++E+ G P
Sbjct: 197 VDIWSLGIMVIEMVDGEPP 215
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 11/199 (5%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDS----DHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
KGG K + + + E+ K+ S H ++ EI L H+++V G+
Sbjct: 31 KGGFAKCFE-ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 89
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ +V + SL ++ R +L + ++ + G YLH V+H
Sbjct: 90 FEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRNR---VIH 144
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTD 521
RD+K N+ L+ DLE K+GDFGLA ++ + T + GT Y+APE+L + D
Sbjct: 145 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSFEVD 203
Query: 522 VYAFGVFMLEVACGRRPVQ 540
V++ G M + G+ P +
Sbjct: 204 VWSIGCIMYTLLVGKPPFE 222
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 112/226 (49%), Gaps = 28/226 (12%)
Query: 337 SYKNLYKATKGGSGKVYRGV-LPSSHAEIAVKKV-CHDSDHGMKQFVSEIVSMGKLRHR- 393
Y+ + + +G GKV++ L + +A+K+V + GM +S I + LRH
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMP--LSTIREVAVLRHLE 69
Query: 394 -----NLVQLRGYCR-----RKGELLLVYDYMPNG---SLDKILYSNTRPSLNWFQRFRI 440
N+V+L C R+ +L LV++++ LDK+ F++
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 441 IKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVV 500
++G+ F L+ H V+HRD+KP N+L+ + + KL DFGLAR+Y L T+VV
Sbjct: 130 LRGLDF--LHSHR-----VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--TSVV 180
Query: 501 GTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
T+ Y APE+L T D+++ G E+ R+P+ G D+
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKPLFRGSSDV 225
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Query: 340 NLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLR 399
N K +G +G V + SS +AVKK+ + +E+V M +H N+V++
Sbjct: 33 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY 92
Query: 400 GYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
EL +V +++ G+L I+ ++TR +N Q + V L LH Q V
Sbjct: 93 NSYLVGDELWVVMEFLEGGALTDIV-THTR--MNEEQIAAVCLAVLQALSVLH---AQGV 146
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIK ++LL D KL DFG +VGT ++APEL+
Sbjct: 147 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRKXLVGTPYWMAPELISRLPYGPE 205
Query: 520 TDVYAFGVFMLEVACGRRP 538
D+++ G+ ++E+ G P
Sbjct: 206 VDIWSLGIMVIEMVDGEPP 224
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Query: 340 NLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLR 399
N K +G +G V + SS +AVKK+ + +E+V M +H N+V++
Sbjct: 35 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY 94
Query: 400 GYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
EL +V +++ G+L I+ ++TR +N Q + V L LH Q V
Sbjct: 95 NSYLVGDELWVVMEFLEGGALTDIV-THTR--MNEEQIAAVCLAVLQALSVLH---AQGV 148
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIK ++LL D KL DFG +VGT ++APEL+
Sbjct: 149 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRKXLVGTPYWMAPELISRLPYGPE 207
Query: 520 TDVYAFGVFMLEVACGRRP 538
D+++ G+ ++E+ G P
Sbjct: 208 VDIWSLGIMVIEMVDGEPP 226
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 112/216 (51%), Gaps = 15/216 (6%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSD-HGM-KQFVSEIVSMGKLRHRN 394
+++ + K +G G VY+ + +A+KK+ D++ G+ + EI + +L H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGS---LDKILYSNTRPSLNWFQRFRIIKGVAFGLLYL 451
+V+L + +L LV++++ +D + L F++++G+AF +
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAF--CHS 124
Query: 452 HEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL 511
H VLHRD+KP N+L++ + KL DFGLAR + + VV T+ Y APE+L
Sbjct: 125 HR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 178
Query: 512 RNGR-GTTSTDVYAFGVFMLEVACGRRPVQPGELDL 546
+ +T+ D+++ G E+ RR + PG+ ++
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEI 213
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 134/304 (44%), Gaps = 41/304 (13%)
Query: 347 GGSGKVYRGV---LPS--SHAEIAVK---KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQL 398
G G+VY G +P+ S ++AVK +VC + D F+ E + + K H+N+V+
Sbjct: 42 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE--LDFLMEALIISKFNHQNIVRC 99
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRP------SLNWFQRFRIIKGVAFGLLYLH 452
G + ++ + M G L L TRP SL + + +A G YL
Sbjct: 100 IGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 453 EEWEQVVLHRDIKPANVLLDADLEG---KLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAP 508
E +HRDI N LL G K+GDFG+A+ +Y + V ++ P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRL 567
E G T+ TD ++FGV + E+ + G P P + + V+++ G +D
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY-PSKSN--QEVLEFVTSGGRMDPPKNCP 272
Query: 568 EGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSSV---FGVLT 624
+Y ++ C P+ RP+ +++ ++ PD+ +N+++ +G L
Sbjct: 273 GPVY---------RIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV-INTALPIEYGPLV 322
Query: 625 AKNE 628
+ E
Sbjct: 323 EEEE 326
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Query: 340 NLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLR 399
N K +G +G V + SS +AVKK+ + +E+V M +H N+V++
Sbjct: 28 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY 87
Query: 400 GYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
EL +V +++ G+L I+ ++TR +N Q + V L LH Q V
Sbjct: 88 NSYLVGDELWVVMEFLEGGALTDIV-THTR--MNEEQIAAVCLAVLQALSVLH---AQGV 141
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIK ++LL D KL DFG +VGT ++APEL+
Sbjct: 142 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRKXLVGTPYWMAPELISRLPYGPE 200
Query: 520 TDVYAFGVFMLEVACGRRP 538
D+++ G+ ++E+ G P
Sbjct: 201 VDIWSLGIMVIEMVDGEPP 219
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 109/229 (47%), Gaps = 26/229 (11%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G+V V + +AVK K D +K+ EI L H N+V+ G+
Sbjct: 15 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGH 71
Query: 402 CRRKGEL-LLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
RR+G + L +Y G L D+I P + QRF + G++YLH +
Sbjct: 72 -RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRF--FHQLMAGVVYLHG---IGI 124
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAPELL-RNGRGT 517
HRDIKP N+LLD K+ DFGLA ++ + N N + GT+ Y+APELL R
Sbjct: 125 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 184
Query: 518 TSTDVYAFGVFMLEVACGRRPV-QPGE--LDLLDW-----VIDYWQKGD 558
DV++ G+ + + G P QP + + DW ++ W+K D
Sbjct: 185 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 233
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 11/199 (5%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDS----DHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
KGG K + + + E+ K+ S H ++ EI L H+++V G+
Sbjct: 27 KGGFAKCFE-ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 85
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ +V + SL ++ R +L + ++ + G YLH V+H
Sbjct: 86 FEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRNR---VIH 140
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTD 521
RD+K N+ L+ DLE K+GDFGLA ++ + T + GT Y+APE+L + D
Sbjct: 141 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSFEVD 199
Query: 522 VYAFGVFMLEVACGRRPVQ 540
V++ G M + G+ P +
Sbjct: 200 VWSIGCIMYTLLVGKPPFE 218
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 109/229 (47%), Gaps = 26/229 (11%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G+V V + +AVK K D +K+ EI L H N+V+ G+
Sbjct: 17 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGH 73
Query: 402 CRRKGEL-LLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
RR+G + L +Y G L D+I P + QRF + G++YLH +
Sbjct: 74 -RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRF--FHQLMAGVVYLHG---IGI 126
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAPELL-RNGRGT 517
HRDIKP N+LLD K+ DFGLA ++ + N N + GT+ Y+APELL R
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 518 TSTDVYAFGVFMLEVACGRRPV-QPGE--LDLLDW-----VIDYWQKGD 558
DV++ G+ + + G P QP + + DW ++ W+K D
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 235
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 109/229 (47%), Gaps = 26/229 (11%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G+V V + +AVK K D +K+ EI L H N+V+ G+
Sbjct: 17 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGH 73
Query: 402 CRRKGEL-LLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
RR+G + L +Y G L D+I P + QRF + G++YLH +
Sbjct: 74 -RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRF--FHQLMAGVVYLHG---IGI 126
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAPELL-RNGRGT 517
HRDIKP N+LLD K+ DFGLA ++ + N N + GT+ Y+APELL R
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 518 TSTDVYAFGVFMLEVACGRRPV-QPGE--LDLLDW-----VIDYWQKGD 558
DV++ G+ + + G P QP + + DW ++ W+K D
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 235
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 109/229 (47%), Gaps = 26/229 (11%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G+V V + +AVK K D +K+ EI L H N+V+ G+
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGH 72
Query: 402 CRRKGEL-LLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
RR+G + L +Y G L D+I P + QRF + G++YLH +
Sbjct: 73 -RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRF--FHQLMAGVVYLHG---IGI 125
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAPELL-RNGRGT 517
HRDIKP N+LLD K+ DFGLA ++ + N N + GT+ Y+APELL R
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 518 TSTDVYAFGVFMLEVACGRRPV-QPGE--LDLLDW-----VIDYWQKGD 558
DV++ G+ + + G P QP + + DW ++ W+K D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 234
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 109/229 (47%), Gaps = 26/229 (11%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G+V V + +AVK K D +K+ EI L H N+V+ G+
Sbjct: 17 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGH 73
Query: 402 CRRKGEL-LLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
RR+G + L +Y G L D+I P + QRF + G++YLH +
Sbjct: 74 -RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRF--FHQLMAGVVYLHG---IGI 126
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAPELL-RNGRGT 517
HRDIKP N+LLD K+ DFGLA ++ + N N + GT+ Y+APELL R
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 518 TSTDVYAFGVFMLEVACGRRPV-QPGE--LDLLDW-----VIDYWQKGD 558
DV++ G+ + + G P QP + + DW ++ W+K D
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 235
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G+V V + +AVK K D +K+ EI L H N+V+ G+
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGH 72
Query: 402 CRRKGEL-LLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
RR+G + L +Y G L D+I P + QRF + G++YLH +
Sbjct: 73 -RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRF--FHQLMAGVVYLHG---IGI 125
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAPELL-RNGRGT 517
HRDIKP N+LLD K+ DFGLA ++ + N N + GT+ Y+APELL R
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 518 TSTDVYAFGVFMLEVACGRRP 538
DV++ G+ + + G P
Sbjct: 186 EPVDVWSCGIVLTAMLAGELP 206
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G+V V + +AVK K D +K+ EI L H N+V+ G+
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGH 72
Query: 402 CRRKGEL-LLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
RR+G + L +Y G L D+I P + QRF + G++YLH +
Sbjct: 73 -RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRF--FHQLMAGVVYLHG---IGI 125
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAPELL-RNGRGT 517
HRDIKP N+LLD K+ DFGLA ++ + N N + GT+ Y+APELL R
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 518 TSTDVYAFGVFMLEVACGRRP 538
DV++ G+ + + G P
Sbjct: 186 EPVDVWSCGIVLTAMLAGELP 206
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 11/199 (5%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDS----DHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
KGG K + + + E+ K+ S H ++ EI L H+++V G+
Sbjct: 27 KGGFAKCFE-ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 85
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ +V + SL ++ R +L + ++ + G YLH V+H
Sbjct: 86 FEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRNR---VIH 140
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTD 521
RD+K N+ L+ DLE K+GDFGLA ++ + T + GT Y+APE+L + D
Sbjct: 141 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSFEVD 199
Query: 522 VYAFGVFMLEVACGRRPVQ 540
V++ G M + G+ P +
Sbjct: 200 VWSIGCIMYTLLVGKPPFE 218
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G+V V + +AVK K D +K+ EI L H N+V+ G+
Sbjct: 17 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGH 73
Query: 402 CRRKGEL-LLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
RR+G + L +Y G L D+I P + QRF + G++YLH +
Sbjct: 74 -RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRF--FHQLMAGVVYLHG---IGI 126
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAPELL-RNGRGT 517
HRDIKP N+LLD K+ DFGLA ++ + N N + GT+ Y+APELL R
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 518 TSTDVYAFGVFMLEVACGRRP 538
DV++ G+ + + G P
Sbjct: 187 EPVDVWSCGIVLTAMLAGELP 207
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 120/267 (44%), Gaps = 22/267 (8%)
Query: 343 KATKGGSGKVYRGVLPSSHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
K G G V+ SS E +K + D S M+Q +EI + L H N++++
Sbjct: 29 KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEV 88
Query: 402 CRRKGELLLVYDYMPNGSL-DKILYSNTR-PSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
+ +V + G L ++I+ + R +L+ ++K + L Y H Q V
Sbjct: 89 FEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHV 145
Query: 460 LHRDIKPANVLL-DADLEG--KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRG 516
+H+D+KP N+L D K+ DFGLA L+ +D H+TN GT Y+APE+ +
Sbjct: 146 VHKDLKPENILFQDTSPHSPIKIIDFGLAELFK--SDEHSTNAAGTALYMAPEVFKRDV- 202
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQM 576
T D+++ GV M + G P L+ + Y + ++ + + + +QM
Sbjct: 203 TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQM 262
Query: 577 EIVLKLGLFCSHSNPDTRPSMRQVVQY 603
+P+ RPS QV+ +
Sbjct: 263 LT----------KDPERRPSAAQVLHH 279
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 22/214 (10%)
Query: 334 HRFSYKNLYKATKGGSGKVY--RGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLR 391
H +Y+ L KG KV R +L + + + +++ E+ M L
Sbjct: 5 HIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLN 64
Query: 392 HRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQ------RFRIIKGVA 445
H N+V+L + L LV +Y G + L ++ W + +FR I
Sbjct: 65 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-----GWMKEKEARAKFRQI---V 116
Query: 446 FGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGY 505
+ Y H+++ ++HRD+K N+LLDAD+ K+ DFG + + GN L T G+ Y
Sbjct: 117 SAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPY 171
Query: 506 LAPELLRNGR-GTTSTDVYAFGVFMLEVACGRRP 538
APEL + + DV++ GV + + G P
Sbjct: 172 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 205
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Query: 340 NLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLR 399
N K +G +G V + SS +AVKK+ + +E+V M +H N+V++
Sbjct: 155 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY 214
Query: 400 GYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
EL +V +++ G+L I+ ++TR +N Q + V L LH Q V
Sbjct: 215 NSYLVGDELWVVMEFLEGGALTDIV-THTR--MNEEQIAAVCLAVLQALSVLH---AQGV 268
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIK ++LL D KL DFG +VGT ++APEL+
Sbjct: 269 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRKXLVGTPYWMAPELISRLPYGPE 327
Query: 520 TDVYAFGVFMLEVACGRRP 538
D+++ G+ ++E+ G P
Sbjct: 328 VDIWSLGIMVIEMVDGEPP 346
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Query: 340 NLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLR 399
N K +G +G V + ++AVKK+ + +E+V M H N+V +
Sbjct: 49 NFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMY 108
Query: 400 GYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
EL +V +++ G+L I+ ++TR +N Q + V L YLH Q V
Sbjct: 109 SSYLVGDELWVVMEFLEGGALTDIV-THTR--MNEEQIATVCLSVLRALSYLHN---QGV 162
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIK ++LL +D KL DFG +VGT ++APE++ T
Sbjct: 163 IHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP-KRKXLVGTPYWMAPEVISRLPYGTE 221
Query: 520 TDVYAFGVFMLEVACGRRP 538
D+++ G+ ++E+ G P
Sbjct: 222 VDIWSLGIMVIEMIDGEPP 240
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 109/226 (48%), Gaps = 20/226 (8%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGK-LRHRNLVQLRGYCRR 404
+G G+V V + +AVK V + + + + + K L H N+V+ G+ RR
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH-RR 74
Query: 405 KGEL-LLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHR 462
+G + L +Y G L D+I P + QRF + G++YLH + HR
Sbjct: 75 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRF--FHQLMAGVVYLHG---IGITHR 128
Query: 463 DIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAPELL-RNGRGTTST 520
DIKP N+LLD K+ DFGLA ++ + N N + GT+ Y+APELL R
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 521 DVYAFGVFMLEVACGRRPV-QPGE--LDLLDW-----VIDYWQKGD 558
DV++ G+ + + G P QP + + DW ++ W+K D
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 234
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 124/294 (42%), Gaps = 39/294 (13%)
Query: 333 PHR-FSYKNLYKATKGGSGKVYRGVLPSSHAE----IAVKKVCHDSDHGMKQFVSEIVSM 387
PHR F +L G G + + +H E + +K++ + + F+ E+ M
Sbjct: 3 PHRIFRPSDLIHGEVLGKG-CFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVM 61
Query: 388 GKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFG 447
L H N+++ G + L + +Y+ G+L I+ S W QR K +A G
Sbjct: 62 RCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKS-MDSQYPWSQRVSFAKDIASG 120
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLY-------------DHGNDL 494
+ YLH ++HRD+ N L+ + + DFGLARL +
Sbjct: 121 MAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRK 177
Query: 495 HTTNVVGTVGYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDY 553
VVG ++APE++ NGR DV++FG+ + E+ GR P D L +D+
Sbjct: 178 KRYTVVGNPYWMAPEMI-NGRSYDEKVDVFSFGIVLCEII-GRVNADP---DYLPRTMDF 232
Query: 554 W--QKGDVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
+G + P + + + C +P+ RPS ++ +L+
Sbjct: 233 GLNVRGFLDRYCPPNCPPSF--------FPITVRCCDLDPEKRPSFVKLEHWLE 278
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Query: 340 NLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLR 399
N K +G +G V + SS +AVKK+ + +E+V M +H N+V++
Sbjct: 78 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY 137
Query: 400 GYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
EL +V +++ G+L I+ ++TR +N Q + V L LH Q V
Sbjct: 138 NSYLVGDELWVVMEFLEGGALTDIV-THTR--MNEEQIAAVCLAVLQALSVLH---AQGV 191
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRDIK ++LL D KL DFG +VGT ++APEL+
Sbjct: 192 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRKXLVGTPYWMAPELISRLPYGPE 250
Query: 520 TDVYAFGVFMLEVACGRRP 538
D+++ G+ ++E+ G P
Sbjct: 251 VDIWSLGIMVIEMVDGEPP 269
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 93/175 (53%), Gaps = 9/175 (5%)
Query: 363 EIAVKKVCHDSD-HGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGE--LLLVYDYMPNGS 419
++AVK + +S + + EI + L H N+V+ +G C G + L+ +++P+GS
Sbjct: 52 QVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGS 111
Query: 420 LDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKL 479
L + L N + +N Q+ + + G+ YL + +HRD+ NVL++++ + K+
Sbjct: 112 LKEYLPKN-KNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKI 167
Query: 480 GDFGLARLYDHGNDLHTT--NVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEV 532
GDFGL + + + T + V + APE L + ++DV++FGV + E+
Sbjct: 168 GDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHEL 222
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G+V V + +AVK K D +K+ EI L H N+V+ G+
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGH 72
Query: 402 CRRKGEL-LLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
RR+G + L +Y G L D+I P + QRF + G++YLH +
Sbjct: 73 -RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRF--FHQLMAGVVYLHG---IGI 125
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAPELL-RNGRGT 517
HRDIKP N+LLD K+ DFGLA ++ + N N + GT+ Y+APELL R
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 518 TSTDVYAFGVFMLEVACGRRP 538
DV++ G+ + + G P
Sbjct: 186 EPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 109/229 (47%), Gaps = 26/229 (11%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G+V V + +AVK K D +K+ EI L H N+V+ G+
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGH 72
Query: 402 CRRKGEL-LLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
RR+G + L +Y G L D+I P + QRF + G++YLH +
Sbjct: 73 -RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRF--FHQLMAGVVYLHG---IGI 125
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAPELL-RNGRGT 517
HRDIKP N+LLD K+ DFGLA ++ + N N + GT+ Y+APELL R
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 518 TSTDVYAFGVFMLEVACGRRPV-QPGE--LDLLDW-----VIDYWQKGD 558
DV++ G+ + + G P QP + + DW ++ W+K D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 234
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 109/229 (47%), Gaps = 26/229 (11%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G+V V + +AVK K D +K+ EI L H N+V+ G+
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGH 72
Query: 402 CRRKGEL-LLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
RR+G + L +Y G L D+I P + QRF + G++YLH +
Sbjct: 73 -RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRF--FHQLMAGVVYLHG---IGI 125
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAPELL-RNGRGT 517
HRDIKP N+LLD K+ DFGLA ++ + N N + GT+ Y+APELL R
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 518 TSTDVYAFGVFMLEVACGRRPV-QPGE--LDLLDW-----VIDYWQKGD 558
DV++ G+ + + G P QP + + DW ++ W+K D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKKID 234
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 93/175 (53%), Gaps = 9/175 (5%)
Query: 363 EIAVKKVCHDSD-HGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGE--LLLVYDYMPNGS 419
++AVK + +S + + EI + L H N+V+ +G C G + L+ +++P+GS
Sbjct: 40 QVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGS 99
Query: 420 LDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKL 479
L + L N + +N Q+ + + G+ YL + +HRD+ NVL++++ + K+
Sbjct: 100 LKEYLPKN-KNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKI 155
Query: 480 GDFGLARLYDHGNDLHTT--NVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEV 532
GDFGL + + + T + V + APE L + ++DV++FGV + E+
Sbjct: 156 GDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHEL 210
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 9/205 (4%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
R + K +G +G V S ++AVK + + +E+V M +H N
Sbjct: 44 RLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
+V++ EL ++ +++ G+L I+ S R LN Q + + V L YLH
Sbjct: 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIV-SQVR--LNEEQIATVCEAVLQALAYLHA- 159
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDL-HTTNVVGTVGYLAPELLRN 513
Q V+HRDIK ++LL D KL DFG D+ +VGT ++APE++
Sbjct: 160 --QGVIHRDIKSDSILLTLDGRVKLSDFGFC--AQISKDVPKRKXLVGTPYWMAPEVISR 215
Query: 514 GRGTTSTDVYAFGVFMLEVACGRRP 538
T D+++ G+ ++E+ G P
Sbjct: 216 SLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 97/198 (48%), Gaps = 12/198 (6%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGK-LRHRNLVQLRGYCRR 404
+G G+V V + +AVK V + + + + + K L H N+V+ G+ RR
Sbjct: 17 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH-RR 75
Query: 405 KGEL-LLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHR 462
+G + L +Y G L D+I P + QRF + G++YLH + HR
Sbjct: 76 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRF--FHQLMAGVVYLHG---IGITHR 129
Query: 463 DIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAPELL-RNGRGTTST 520
DIKP N+LLD K+ DFGLA ++ + N N + GT+ Y+APELL R
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 189
Query: 521 DVYAFGVFMLEVACGRRP 538
DV++ G+ + + G P
Sbjct: 190 DVWSCGIVLTAMLAGELP 207
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 7/131 (5%)
Query: 410 LVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANV 469
+V +Y+ +L I++ T + + +I L + H+ ++HRD+KPAN+
Sbjct: 93 IVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 470 LLDADLEGKLGDFGLAR-LYDHGNDL-HTTNVVGTVGYLAPELLRNGRGTTSTDVYAFGV 527
L+ A K+ DFG+AR + D GN + T V+GT YL+PE R +DVY+ G
Sbjct: 148 LISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 528 FMLEVACGRRP 538
+ EV G P
Sbjct: 208 VLYEVLTGEPP 218
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 121/263 (46%), Gaps = 26/263 (9%)
Query: 346 KGGSGKVYRGVLPSSHAE---IAVKKVCHDSDHGMKQ-FVSEIVSMGKLRHRNLVQLRGY 401
+G G+VY GV + E +AVK D K+ F+SE V M L H ++V+L G
Sbjct: 18 EGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI 77
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV-VL 460
+ +++ Y P G L L N + SL + + YL E + +
Sbjct: 78 IEEEPTWIIMELY-PYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYL----ESINCV 131
Query: 461 HRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT-VGYLAPELLRNGRGTTS 519
HRDI N+L+ + KLGDFGL+R Y D + +V + +++PE + R TT+
Sbjct: 132 HRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 190
Query: 520 TDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEI 578
+DV+ F V M E+ + G++P L+ D VI +KGD L D +Y
Sbjct: 191 SDVWMFAVCMWEILSFGKQPF--FWLENKD-VIGVLEKGDRLPKPDLCPPVLYT------ 241
Query: 579 VLKLGLFCSHSNPDTRPSMRQVV 601
L C +P RP ++V
Sbjct: 242 ---LMTRCWDYDPSDRPRFTELV 261
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 122/266 (45%), Gaps = 26/266 (9%)
Query: 346 KGGSGKVYRGVLPSSHAE---IAVKKVCHDSDHGMKQ-FVSEIVSMGKLRHRNLVQLRGY 401
+G G+VY GV + E +AVK D K+ F+SE V M L H ++V+L G
Sbjct: 34 EGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI 93
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV-VL 460
+ +++ Y P G L L N + SL + + YL E + +
Sbjct: 94 IEEEPTWIIMELY-PYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYL----ESINCV 147
Query: 461 HRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT-VGYLAPELLRNGRGTTS 519
HRDI N+L+ + KLGDFGL+R Y D + +V + +++PE + R TT+
Sbjct: 148 HRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 206
Query: 520 TDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEI 578
+DV+ F V M E+ + G++P L+ D VI +KGD L D +Y
Sbjct: 207 SDVWMFAVCMWEILSFGKQPF--FWLENKD-VIGVLEKGDRLPKPDLCPPVLYT------ 257
Query: 579 VLKLGLFCSHSNPDTRPSMRQVVQYL 604
L C +P RP ++V L
Sbjct: 258 ---LMTRCWDYDPSDRPRFTELVCSL 280
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 91/192 (47%), Gaps = 9/192 (4%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G GKVY+ + A K + S+ ++ ++ EI + H N+V+L +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
L ++ ++ G++D ++ RP L Q + K L YLH + ++HRD+K
Sbjct: 81 NLWILIEFCAGGAVDAVMLELERP-LTESQIQVVCKQTLDALNYLH---DNKIIHRDLKA 136
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL-----RNGRGTTSTD 521
N+L D + KL DFG++ + +GT ++APE++ ++ D
Sbjct: 137 GNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKAD 196
Query: 522 VYAFGVFMLEVA 533
V++ G+ ++E+A
Sbjct: 197 VWSLGITLIEMA 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 109/226 (48%), Gaps = 20/226 (8%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGK-LRHRNLVQLRGYCRR 404
+G G+V V + +AVK V + + + + + K L H N+V+ G+ RR
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH-RR 74
Query: 405 KGEL-LLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHR 462
+G + L +Y G L D+I P + QRF + G++YLH + HR
Sbjct: 75 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRF--FHQLMAGVVYLHG---IGITHR 128
Query: 463 DIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAPELL-RNGRGTTST 520
DIKP N+LLD K+ DFGLA ++ + N N + GT+ Y+APELL R
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 188
Query: 521 DVYAFGVFMLEVACGRRPV-QPGE--LDLLDW-----VIDYWQKGD 558
DV++ G+ + + G P QP + + DW ++ W+K D
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 234
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
Query: 332 SPHRFSYKNLYKATKGGSGKVY--RGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGK 389
PH +Y+ L KG KV R +L I + + +++ E+ M
Sbjct: 8 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKI 67
Query: 390 LRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQ-RFRIIKGVAFGL 448
L H N+V+L + L L+ +Y G + L ++ R + +FR + +
Sbjct: 68 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAV 124
Query: 449 LYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAP 508
Y H+ + ++HRD+K N+LLDAD+ K+ DFG + + G L T G+ Y AP
Sbjct: 125 QYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT--FCGSPPYAAP 179
Query: 509 ELLRNGR-GTTSTDVYAFGVFMLEVACGRRP 538
EL + + DV++ GV + + G P
Sbjct: 180 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 210
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 122/266 (45%), Gaps = 26/266 (9%)
Query: 346 KGGSGKVYRGVLPSSHAE---IAVKKVCHDSDHGMKQ-FVSEIVSMGKLRHRNLVQLRGY 401
+G G+VY GV + E +AVK D K+ F+SE V M L H ++V+L G
Sbjct: 22 EGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI 81
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV-VL 460
+ +++ Y P G L L N + SL + + YL E + +
Sbjct: 82 IEEEPTWIIMELY-PYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYL----ESINCV 135
Query: 461 HRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT-VGYLAPELLRNGRGTTS 519
HRDI N+L+ + KLGDFGL+R Y D + +V + +++PE + R TT+
Sbjct: 136 HRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 194
Query: 520 TDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEI 578
+DV+ F V M E+ + G++P L+ D VI +KGD L D +Y
Sbjct: 195 SDVWMFAVCMWEILSFGKQPF--FWLENKD-VIGVLEKGDRLPKPDLCPPVLYT------ 245
Query: 579 VLKLGLFCSHSNPDTRPSMRQVVQYL 604
L C +P RP ++V L
Sbjct: 246 ---LMTRCWDYDPSDRPRFTELVCSL 268
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 80/158 (50%), Gaps = 10/158 (6%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIK 442
EI ++ RH ++++L + +V +Y+ G L + + R + + R+ +
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQ 118
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT 502
+ + Y H +V+HRD+KP NVLLDA + K+ DFGL+ + G L + G+
Sbjct: 119 QILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS--CGS 173
Query: 503 VGYLAPELLRNGR--GTTSTDVYAFGVFMLEVACGRRP 538
Y APE++ +GR D+++ GV + + CG P
Sbjct: 174 PNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDL-HT 496
R I+ +A L+ + ++HRD+KPAN+++ A K+ DFG+AR + D GN + T
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 497 TNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
V+GT YL+PE R +DVY+ G + EV G P
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDL-HT 496
R I+ +A L+ + ++HRD+KPAN+++ A K+ DFG+AR + D GN + T
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 497 TNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
V+GT YL+PE R +DVY+ G + EV G P
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDL-HT 496
R I+ +A L+ + ++HRD+KPAN+++ A K+ DFG+AR + D GN + T
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 497 TNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
V+GT YL+PE R +DVY+ G + EV G P
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDL-HT 496
R I+ +A L+ + ++HRD+KPAN+++ A K+ DFG+AR + D GN + T
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 497 TNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
V+GT YL+PE R +DVY+ G + EV G P
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 77/165 (46%), Gaps = 5/165 (3%)
Query: 376 GMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWF 435
G ++E + K+ R +V L K L LV M G L +Y +
Sbjct: 227 GEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA 286
Query: 436 QRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLH 495
+ + GL LH E +++RD+KP N+LLD ++ D GLA G +
Sbjct: 287 RAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIK 343
Query: 496 TTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQ 540
VGTVGY+APE+++N R T S D +A G + E+ G+ P Q
Sbjct: 344 GR--VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 12/211 (5%)
Query: 332 SPHRFSYKNLYKATKGGSGKVY--RGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGK 389
PH +Y+ L KG KV R +L + + + +++ E+
Sbjct: 10 QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKV 69
Query: 390 LRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQ-RFRIIKGVAFGL 448
L H N+V+L + L LV +Y G + L ++ R + +FR I +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQI---VSAV 126
Query: 449 LYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAP 508
Y H+++ ++HRD+K N+LLDAD K+ DFG + + GN L G Y AP
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA--FCGAPPYAAP 181
Query: 509 ELLRNGR-GTTSTDVYAFGVFMLEVACGRRP 538
EL + + DV++ GV + + G P
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 392 HRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYL 451
H N++QL+ LV+D M G L Y + +L+ + +I++ + + L
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGEL--FDYLTEKVTLSEKETRKIMRALLEVICAL 140
Query: 452 HEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL 511
H+ ++HRD+KP N+LLD D+ KL DFG + D G L + V GT YLAPE++
Sbjct: 141 HK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS--VCGTPSYLAPEII 195
Query: 512 RNGRGTT------STDVYAFGVFMLEVACGRRP 538
D+++ GV M + G P
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 109/227 (48%), Gaps = 19/227 (8%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKV-CHDSDHGMK-QFVSEIVSMGKLR---H 392
Y+ + + G G VY+ P S +A+K V + + G+ V E+ + +L H
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 393 RNLVQLRGYCR-----RKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFG 447
N+V+L C R+ ++ LV++++ + L L P L +++ G
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLA 507
L +LH ++HRD+KP N+L+ + KL DFGLAR+Y + L VV T+ Y A
Sbjct: 125 LDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL--APVVVTLWYRA 179
Query: 508 PELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPG--ELDLLDWVID 552
PE+L T D+++ G E+ R+P+ G E D L + D
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEM-FRRKPLFCGNSEADQLGKIFD 225
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 77/165 (46%), Gaps = 5/165 (3%)
Query: 376 GMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWF 435
G ++E + K+ R +V L K L LV M G L +Y +
Sbjct: 227 GEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA 286
Query: 436 QRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLH 495
+ + GL LH E +++RD+KP N+LLD ++ D GLA G +
Sbjct: 287 RAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIK 343
Query: 496 TTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQ 540
VGTVGY+APE+++N R T S D +A G + E+ G+ P Q
Sbjct: 344 --GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 26/184 (14%)
Query: 366 VKKVCHDSDHGMKQFVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYMPNGSL---- 420
+K+ DH + F E+ + KL H N++ L G C +G L L +Y P+G+L
Sbjct: 60 MKEYASKDDH--RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 117
Query: 421 --DKILYSN--------TRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVL 470
++L ++ T +L+ Q VA G+ YL ++ +HRD+ N+L
Sbjct: 118 RKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNIL 174
Query: 471 LDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYAFGVF 528
+ + K+ DFGL+R G +++ +G V ++A E L TT++DV+++GV
Sbjct: 175 VGENYVAKIADFGLSR----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL 230
Query: 529 MLEV 532
+ E+
Sbjct: 231 LWEI 234
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 26/184 (14%)
Query: 366 VKKVCHDSDHGMKQFVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYMPNGSL---- 420
+K+ DH + F E+ + KL H N++ L G C +G L L +Y P+G+L
Sbjct: 50 MKEYASKDDH--RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 107
Query: 421 --DKILYSN--------TRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVL 470
++L ++ T +L+ Q VA G+ YL ++ +HRD+ N+L
Sbjct: 108 RKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNIL 164
Query: 471 LDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYAFGVF 528
+ + K+ DFGL+R G +++ +G V ++A E L TT++DV+++GV
Sbjct: 165 VGENYVAKIADFGLSR----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL 220
Query: 529 MLEV 532
+ E+
Sbjct: 221 LWEI 224
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 14/156 (8%)
Query: 389 KLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSN---TRPSLNWFQRFRIIKGVA 445
++ H +V+L + +G+L L+ D++ G L L T + ++ + +A
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY-----LAELA 136
Query: 446 FGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARL-YDHGNDLHTTNVVGTVG 504
L +LH +++RD+KP N+LLD + KL DFGL++ DH ++ GTV
Sbjct: 137 LALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVE 191
Query: 505 YLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQ 540
Y+APE++ T S D ++FGV M E+ G P Q
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 392 HRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYL 451
H N++QL+ LV+D M G L Y + +L+ + +I++ + + L
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGEL--FDYLTEKVTLSEKETRKIMRALLEVICAL 140
Query: 452 HEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL 511
H+ ++HRD+KP N+LLD D+ KL DFG + D G L V GT YLAPE++
Sbjct: 141 HK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR--EVCGTPSYLAPEII 195
Query: 512 RNGRGTT------STDVYAFGVFMLEVACGRRP 538
D+++ GV M + G P
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 392 HRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYL 451
H N++QL+ LV+D M G L Y + +L+ + +I++ + + L
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGEL--FDYLTEKVTLSEKETRKIMRALLEVICAL 127
Query: 452 HEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL 511
H+ ++HRD+KP N+LLD D+ KL DFG + D G L V GT YLAPE++
Sbjct: 128 HK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR--EVCGTPSYLAPEII 182
Query: 512 RNGRGTT------STDVYAFGVFMLEVACGRRP 538
D+++ GV M + G P
Sbjct: 183 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 11/199 (5%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDS----DHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
KGG K + + + E+ K+ S H ++ EI L H+++V G+
Sbjct: 51 KGGFAKCFE-ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 109
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ +V + SL ++ R +L + ++ + G YLH V+H
Sbjct: 110 FEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRNR---VIH 164
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTD 521
RD+K N+ L+ DLE K+GDFGLA ++ + + GT Y+APE+L + D
Sbjct: 165 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSFEVD 223
Query: 522 VYAFGVFMLEVACGRRPVQ 540
V++ G M + G+ P +
Sbjct: 224 VWSIGCIMYTLLVGKPPFE 242
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 109/227 (48%), Gaps = 19/227 (8%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKV-CHDSDHGMK-QFVSEIVSMGKLR---H 392
Y+ + + G G VY+ P S +A+K V + + G+ V E+ + +L H
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 393 RNLVQLRGYCR-----RKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFG 447
N+V+L C R+ ++ LV++++ + L L P L +++ G
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLA 507
L +LH ++HRD+KP N+L+ + KL DFGLAR+Y + L VV T+ Y A
Sbjct: 125 LDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP--VVVTLWYRA 179
Query: 508 PELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPG--ELDLLDWVID 552
PE+L T D+++ G E+ R+P+ G E D L + D
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEM-FRRKPLFCGNSEADQLGKIFD 225
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 11/199 (5%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDS----DHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
KGG K + + + E+ K+ S H ++ EI L H+++V G+
Sbjct: 49 KGGFAKCFE-ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 107
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ +V + SL ++ R +L + ++ + G YLH V+H
Sbjct: 108 FEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRNR---VIH 162
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTD 521
RD+K N+ L+ DLE K+GDFGLA ++ + + GT Y+APE+L + D
Sbjct: 163 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSFEVD 221
Query: 522 VYAFGVFMLEVACGRRPVQ 540
V++ G M + G+ P +
Sbjct: 222 VWSIGCIMYTLLVGKPPFE 240
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 109/227 (48%), Gaps = 19/227 (8%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKV-CHDSDHGMK-QFVSEIVSMGKLR---H 392
Y+ + + G G VY+ P S +A+K V + + G+ V E+ + +L H
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 393 RNLVQLRGYCR-----RKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFG 447
N+V+L C R+ ++ LV++++ + L L P L +++ G
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLA 507
L +LH ++HRD+KP N+L+ + KL DFGLAR+Y + L VV T+ Y A
Sbjct: 125 LDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDP--VVVTLWYRA 179
Query: 508 PELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPG--ELDLLDWVID 552
PE+L T D+++ G E+ R+P+ G E D L + D
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEM-FRRKPLFCGNSEADQLGKIFD 225
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDL-HT 496
R I+ +A L+ + ++HRD+KPAN+++ A K+ DFG+AR + D GN + T
Sbjct: 134 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 193
Query: 497 TNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
V+GT YL+PE R +DVY+ G + EV G P
Sbjct: 194 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 8/175 (4%)
Query: 362 AEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRG--YCRRKGELLLVYDYMPNGS 419
A +AVK++ H + F EI + L +V+ RG Y + EL LV +Y+P+G
Sbjct: 37 ALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGC 96
Query: 420 LDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKL 479
L L + R L+ + + G+ YL + +HRD+ N+L++++ K+
Sbjct: 97 LRDFLQRH-RARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKI 152
Query: 480 GDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYAFGVFMLEV 532
DFGLA+L D G + + APE L + + +DV++FGV + E+
Sbjct: 153 ADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 207
>pdb|2FMD|A Chain A, Structural Basis Of Carbohydrate Recognition By Bowringia
Milbraedii Seed Agglutinin
Length = 240
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 105 MAFFI-SPSTDFSEAVAGSHLGIFNRSNNGQFTNHIFAIELDTVQSPEFNDIDGNHVGID 163
+ FFI SP T G LG+F SNN N + ++E DT + + D + H+GID
Sbjct: 88 LTFFIASPDTKIPSGSGGRLLGLFGSSNNAGSDNGVVSVEFDTYPNTDIGDPNYRHIGID 147
Query: 164 VNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWIDYNGQEKLVNVTLAPVPNPKPSR 223
VN ++S ++ + ++GK I YN K ++V ++ PN P
Sbjct: 148 VNSIRSKAASKWDW-------------QNGKTATAHISYNSASKRLSV-VSSYPNSSP-- 191
Query: 224 PLLSTSIDLSQILQDSMYVGLSAATGTRVSDYYILGWSFNKS 265
++S ++L+ + + VG SA TG IL WSF S
Sbjct: 192 VVVSFDVELNNVXPXWVRVGFSATTGQYTQTNNILAWSFRSS 233
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 132/302 (43%), Gaps = 37/302 (12%)
Query: 347 GGSGKVYRGV---LPS--SHAEIAVKKVCHD-SDHGMKQFVSEIVSMGKLRHRNLVQLRG 400
G G+VY G +P+ S ++AVK + S+ F+ E + + K H+N+V+ G
Sbjct: 56 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIG 115
Query: 401 YCRRKGELLLVYDYMPNGSLDKILYSNTRP------SLNWFQRFRIIKGVAFGLLYLHEE 454
+ ++ + M G L L TRP SL + + +A G YL E
Sbjct: 116 VSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 174
Query: 455 WEQVVLHRDIKPANVLLDADLEG---KLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAPEL 510
+HRDI N LL G K+GDFG+AR +Y + V ++ PE
Sbjct: 175 H---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 231
Query: 511 LRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEG 569
G T+ TD ++FGV + E+ + G P P + + V+++ G +D
Sbjct: 232 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPY-PSKSN--QEVLEFVTSGGRMDPPKNCPGP 288
Query: 570 IYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDIPLNSSV---FGVLTAK 626
+Y ++ C P+ RP+ +++ ++ PD+ +N+++ +G L +
Sbjct: 289 VY---------RIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV-INTALPIEYGPLVEE 338
Query: 627 NE 628
E
Sbjct: 339 EE 340
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 79/153 (51%), Gaps = 14/153 (9%)
Query: 392 HRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSN---TRPSLNWFQRFRIIKGVAFGL 448
H +V+L + +G+L L+ D++ G L L T + ++ + +A L
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY-----LAELALAL 140
Query: 449 LYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARL-YDHGNDLHTTNVVGTVGYLA 507
+LH +++RD+KP N+LLD + KL DFGL++ DH ++ GTV Y+A
Sbjct: 141 DHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMA 195
Query: 508 PELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQ 540
PE++ T S D ++FGV M E+ G P Q
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 228
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 79/153 (51%), Gaps = 14/153 (9%)
Query: 392 HRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSN---TRPSLNWFQRFRIIKGVAFGL 448
H +V+L + +G+L L+ D++ G L L T + ++ + +A L
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY-----LAELALAL 139
Query: 449 LYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARL-YDHGNDLHTTNVVGTVGYLA 507
+LH +++RD+KP N+LLD + KL DFGL++ DH ++ GTV Y+A
Sbjct: 140 DHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMA 194
Query: 508 PELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQ 540
PE++ T S D ++FGV M E+ G P Q
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 24/203 (11%)
Query: 348 GSGKVYRGVLPSSHAE---IAVKKVCHDSDHGMKQFV-SEIVSMGKLRHRNLVQLRGYCR 403
G+G VL A AVK + + G + + +EI + K++H N+V L
Sbjct: 31 GTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYE 90
Query: 404 RKGELLLVYDYMPNGSL-DKIL----YSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
L LV + G L D+I+ Y+ S +I+ V + YLH
Sbjct: 91 SPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAST-------LIRQVLDAVYYLHR---MG 140
Query: 459 VLHRDIKPANVLL-DADLEGKL--GDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR 515
++HRD+KP N+L D E K+ DFGL+++ G+ + T GT GY+APE+L
Sbjct: 141 IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTA--CGTPGYVAPEVLAQKP 198
Query: 516 GTTSTDVYAFGVFMLEVACGRRP 538
+ + D ++ GV + CG P
Sbjct: 199 YSKAVDCWSIGVIAYILLCGYPP 221
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 11/199 (5%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDS----DHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
KGG K + + + E+ K+ S H ++ EI L H+++V G+
Sbjct: 25 KGGFAKCFE-ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 83
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ +V + SL ++ R +L + ++ + G YLH V+H
Sbjct: 84 FEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRNR---VIH 138
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTD 521
RD+K N+ L+ DLE K+GDFGLA ++ + + GT Y+APE+L + D
Sbjct: 139 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSFEVD 197
Query: 522 VYAFGVFMLEVACGRRPVQ 540
V++ G M + G+ P +
Sbjct: 198 VWSIGCIMYTLLVGKPPFE 216
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 23/224 (10%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQ------FVSEIVSMGKLR 391
YK KG G+V + E AVK + S +KQ + E+ + +L
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVI---SKRQVKQKTDKESLLREVQLLKQLD 84
Query: 392 HRNLVQLRGYCRRKGELLLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLY 450
H N+++L + KG LV + G L D+I+ +R + RII+ V G+ Y
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII---SRKRFSEVDAARIIRQVLSGITY 141
Query: 451 LHEEWEQVVLHRDIKPANVLLDA---DLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLA 507
+H+ ++HRD+KP N+LL++ D ++ DFGL+ ++ + + +GT Y+A
Sbjct: 142 MHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK--DKIGTAYYIA 196
Query: 508 PELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQ-PGELDLLDWV 550
PE+L +G DV++ GV + + G P E D+L V
Sbjct: 197 PEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 239
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 94/190 (49%), Gaps = 17/190 (8%)
Query: 349 SGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGEL 408
+G+ Y + + +K+V H +D E + + + H ++++ G + ++
Sbjct: 30 NGRYYAMKVLKKEIVVRLKQVEHTND--------ERLMLSIVTHPFIIRMWGTFQDAQQI 81
Query: 409 LLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPAN 468
++ DY+ G L +L + R N +F + V L YLH + +++RD+KP N
Sbjct: 82 FMIMDYIEGGELFSLLRKSQRFP-NPVAKFYAAE-VCLALEYLHS---KDIIYRDLKPEN 136
Query: 469 VLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVF 528
+LLD + K+ DFG A+ + D+ T + GT Y+APE++ S D ++FG+
Sbjct: 137 ILLDKNGHIKITDFGFAK---YVPDV-TYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGIL 192
Query: 529 MLEVACGRRP 538
+ E+ G P
Sbjct: 193 IYEMLAGYTP 202
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 387 MGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSN---TRPSLNWFQRFRIIKG 443
+ + H +V+L + +G+L L+ D++ G L L T + ++ +
Sbjct: 84 LADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY-----LAE 138
Query: 444 VAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGT 502
+A GL +LH +++RD+KP N+LLD + KL DFGL++ DH ++ GT
Sbjct: 139 LALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGT 193
Query: 503 VGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQ 540
V Y+APE++ + S D +++GV M E+ G P Q
Sbjct: 194 VEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQ 231
>pdb|3IPV|A Chain A, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
pdb|3IPV|C Chain C, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
Length = 251
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 107/250 (42%), Gaps = 31/250 (12%)
Query: 26 EENQFIHHGFE--GSKLKLDGLAKIHPNGLLQLTNTSER------ISGHAFY--PXXXXX 75
EE F+ F+ L L G A + G+LQLTN + G A Y P
Sbjct: 2 EETSFVFSKFKPLEPNLILQGDALVTVAGVLQLTNVDKNGVPEPSSLGRATYSAPINIWD 61
Query: 76 XXXXXXXXXXXXXXXXAMFPKLPNYGGHGMAFFISPSTDFSEAVAGSHLGIFNRSNNGQF 135
P + G+AFF++P ++ G LG+F+ + +G
Sbjct: 62 SATGLVASFATSFRFTIYAPNIATIA-DGLAFFLAPVASAPDS-GGGFLGLFDSAVSGS- 118
Query: 136 TNHIFAIELDTVQSPEFNDIDGNHVGIDVNGLQSNESASARYFSDEKKEFESLVLESGKP 195
T A+E DT ++ F D H+G DVN + S ++ L +G+
Sbjct: 119 TYQTVAVEFDTYENTVFTDPPYTHIGFDVNSISSIKTVKWS-------------LANGEA 165
Query: 196 IQIWIDYNGQEKLVNVTLAPVPNPKPSRPLLSTSIDLSQILQDSMYVGLSAATGT---RV 252
++ I YN KL+ +L P+ K S +L+ +DLS +L + + VG SAATG ++
Sbjct: 166 AKVLITYNSAVKLLVASLV-YPSSKTSF-ILADIVDLSSVLPEWVRVGFSAATGASGGKI 223
Query: 253 SDYYILGWSF 262
+ + WSF
Sbjct: 224 ETHDVFSWSF 233
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRH------------- 392
+G G+V + A+KK+ H ++ + +SE+ + L H
Sbjct: 16 QGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVXLLASLNHQYVVRYYAAWLER 74
Query: 393 RNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYS---NTRPSLNWFQRFRIIKGVAFGLL 449
RN V+ ++K L + +Y N +L +++S N + W R+ + + L
Sbjct: 75 RNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW----RLFRQILEALS 130
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDL-------------HT 496
Y+H Q ++HR++KP N+ +D K+GDFGLA+ D+ +
Sbjct: 131 YIHS---QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 497 TNVVGTVGYLAPELLR-NGRGTTSTDVYAFGVFMLE 531
T+ +GT Y+A E+L G D Y+ G+ E
Sbjct: 188 TSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 23/224 (10%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQ------FVSEIVSMGKLR 391
YK KG G+V + E AVK + S +KQ + E+ + +L
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKITGQECAVKVI---SKRQVKQKTDKESLLREVQLLKQLD 107
Query: 392 HRNLVQLRGYCRRKGELLLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLY 450
H N+++L + KG LV + G L D+I+ +R + RII+ V G+ Y
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII---SRKRFSEVDAARIIRQVLSGITY 164
Query: 451 LHEEWEQVVLHRDIKPANVLLDA---DLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLA 507
+H+ ++HRD+KP N+LL++ D ++ DFGL+ ++ + + +GT Y+A
Sbjct: 165 MHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK--DKIGTAYYIA 219
Query: 508 PELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQ-PGELDLLDWV 550
PE+L +G DV++ GV + + G P E D+L V
Sbjct: 220 PEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 262
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 84/167 (50%), Gaps = 12/167 (7%)
Query: 377 MKQFVSEIVSMGKLRHRNLVQLRGYCRRKGE--LLLVYDYMPNGSLDKILYSNTRPSLNW 434
++Q EI + KL H N+V+L E L +V++ + G ++ T L+
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGP---VMEVPTLKPLSE 136
Query: 435 FQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDL 494
Q + + G+ YLH Q ++HRDIKP+N+L+ D K+ DFG++ + G+D
Sbjct: 137 DQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF-KGSDA 192
Query: 495 HTTNVVGTVGYLAPELLRNGRGTTS---TDVYAFGVFMLEVACGRRP 538
+N VGT ++APE L R S DV+A GV + G+ P
Sbjct: 193 LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 23/224 (10%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQ------FVSEIVSMGKLR 391
YK KG G+V + E AVK + S +KQ + E+ + +L
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKITGQECAVKVI---SKRQVKQKTDKESLLREVQLLKQLD 108
Query: 392 HRNLVQLRGYCRRKGELLLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLY 450
H N+++L + KG LV + G L D+I+ +R + RII+ V G+ Y
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII---SRKRFSEVDAARIIRQVLSGITY 165
Query: 451 LHEEWEQVVLHRDIKPANVLLDA---DLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLA 507
+H+ ++HRD+KP N+LL++ D ++ DFGL+ ++ + + +GT Y+A
Sbjct: 166 MHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK--DKIGTAYYIA 220
Query: 508 PELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQ-PGELDLLDWV 550
PE+L +G DV++ GV + + G P E D+L V
Sbjct: 221 PEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 263
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 8/175 (4%)
Query: 362 AEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRG--YCRRKGELLLVYDYMPNGS 419
A +AVK++ H + F EI + L +V+ RG Y + L LV +Y+P+G
Sbjct: 40 ALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC 99
Query: 420 LDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKL 479
L L + R L+ + + G+ YL + +HRD+ N+L++++ K+
Sbjct: 100 LRDFLQRH-RARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKI 155
Query: 480 GDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYAFGVFMLEV 532
DFGLA+L D + G + + APE L + + +DV++FGV + E+
Sbjct: 156 ADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 210
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 8/175 (4%)
Query: 362 AEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRG--YCRRKGELLLVYDYMPNGS 419
A +AVK++ H + F EI + L +V+ RG Y + L LV +Y+P+G
Sbjct: 41 ALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC 100
Query: 420 LDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKL 479
L L + R L+ + + G+ YL + +HRD+ N+L++++ K+
Sbjct: 101 LRDFLQRH-RARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKI 156
Query: 480 GDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYAFGVFMLEV 532
DFGLA+L D + G + + APE L + + +DV++FGV + E+
Sbjct: 157 ADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 211
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 22/230 (9%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVK--KVCHDSDHGMKQFVSEIVSMGKLR---- 391
Y+ + + G G VY+ P S +A+K +V + G +S + + LR
Sbjct: 11 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEA 70
Query: 392 --HRNLVQLRGYCR-----RKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGV 444
H N+V+L C R+ ++ LV++++ + L L P L +++
Sbjct: 71 FEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQF 129
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
GL +LH ++HRD+KP N+L+ + KL DFGLAR+Y + L T VV T+
Sbjct: 130 LRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL--TPVVVTLW 184
Query: 505 YLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPG--ELDLLDWVID 552
Y APE+L T D+++ G E+ R+P+ G E D L + D
Sbjct: 185 YRAPEVLLQSTYATPVDMWSVGCIFAEM-FRRKPLFCGNSEADQLGKIFD 233
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 23/224 (10%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQ------FVSEIVSMGKLR 391
YK KG G+V + E AVK + S +KQ + E+ + +L
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKITGQECAVKVI---SKRQVKQKTDKESLLREVQLLKQLD 90
Query: 392 HRNLVQLRGYCRRKGELLLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLY 450
H N+++L + KG LV + G L D+I+ +R + RII+ V G+ Y
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII---SRKRFSEVDAARIIRQVLSGITY 147
Query: 451 LHEEWEQVVLHRDIKPANVLLDA---DLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLA 507
+H+ ++HRD+KP N+LL++ D ++ DFGL+ ++ + + +GT Y+A
Sbjct: 148 MHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM--KDKIGTAYYIA 202
Query: 508 PELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQ-PGELDLLDWV 550
PE+L +G DV++ GV + + G P E D+L V
Sbjct: 203 PEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 245
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 115/264 (43%), Gaps = 20/264 (7%)
Query: 343 KATKGGSGKVYRGVLPSSHAEIAVKKV----CHDSDHGMKQFVSEIVSMGKLRHRNLVQL 398
K +G +VYR +A+KKV D+ + EI + +L H N+++
Sbjct: 39 KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAK-ARADCIKEIDLLKQLNHPNVIKY 97
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKIL--YSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWE 456
EL +V + G L +++ + + + ++ + L ++H
Sbjct: 98 YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS--- 154
Query: 457 QVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRG 516
+ V+HRDIKPANV + A KLGD GL R + ++VGT Y++PE +
Sbjct: 155 RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS-SKTTAAHSLVGTPYYMSPERIHENGY 213
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQM 576
+D+++ G + E+A + P +++L Y + P L + E++
Sbjct: 214 NFKSDIWSLGCLLYEMAALQSPFYGDKMNL------YSLCKKIEQCDYPPLPSDHYSEEL 267
Query: 577 EIVLKLGLFCSHSNPDTRPSMRQV 600
++ + C + +P+ RP + V
Sbjct: 268 RQLVNM---CINPDPEKRPDVTYV 288
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVK-----KVCHDSDHGMKQFVSEIVSMGKLRH 392
Y+ + K G G+V + AE A+K V S+ G + E+ + +L H
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGA--LLDEVAVLKQLDH 63
Query: 393 RNLVQLRGYCRRKGELLLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYL 451
N+++L + K LV + G L D+I+ R + I+K V G YL
Sbjct: 64 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIIL---RQKFSEVDAAVIMKQVLSGTTYL 120
Query: 452 HEEWEQVVLHRDIKPANVLLDA---DLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAP 508
H+ ++HRD+KP N+LL++ D K+ DFGL+ ++ G + +GT Y+AP
Sbjct: 121 HK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER--LGTAYYIAP 175
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
E+LR + DV++ GV + + CG P
Sbjct: 176 EVLRK-KYDEKCDVWSCGVILYILLCGYPP 204
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 8/175 (4%)
Query: 362 AEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRG--YCRRKGELLLVYDYMPNGS 419
A +AVK++ H + F EI + L +V+ RG Y + L LV +Y+P+G
Sbjct: 53 ALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC 112
Query: 420 LDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKL 479
L L + R L+ + + G+ YL + +HRD+ N+L++++ K+
Sbjct: 113 LRDFLQRH-RARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKI 168
Query: 480 GDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYAFGVFMLEV 532
DFGLA+L D + G + + APE L + + +DV++FGV + E+
Sbjct: 169 ADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 223
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 21/165 (12%)
Query: 382 SEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSL-DKIL----YSNTRPSLNWFQ 436
+EI + K++H N+V L LV + G L D+IL Y+ SL
Sbjct: 55 NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL---- 110
Query: 437 RFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGK---LGDFGLARLYDHGND 493
+I+ V + YLHE ++HRD+KP N+L E + DFGL+++ +G
Sbjct: 111 ---VIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI- 163
Query: 494 LHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ GT GY+APE+L + + D ++ GV + CG P
Sbjct: 164 --MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVK-----KVCHDSDHGMKQFVSEIVSMGKLRH 392
Y+ + K G G+V + AE A+K V S+ G + E+ + +L H
Sbjct: 23 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGA--LLDEVAVLKQLDH 80
Query: 393 RNLVQLRGYCRRKGELLLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYL 451
N+++L + K LV + G L D+I+ R + I+K V G YL
Sbjct: 81 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII---LRQKFSEVDAAVIMKQVLSGTTYL 137
Query: 452 HEEWEQVVLHRDIKPANVLLDA---DLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAP 508
H+ ++HRD+KP N+LL++ D K+ DFGL+ ++ G + +GT Y+AP
Sbjct: 138 HK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER--LGTAYYIAP 192
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
E+LR + DV++ GV + + CG P
Sbjct: 193 EVLRK-KYDEKCDVWSCGVILYILLCGYPP 221
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 12/198 (6%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKK-----VCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRG 400
KG GKV+ ++ A+K V D D ++S+ H L +
Sbjct: 28 KGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-WEHPFLTHMFC 86
Query: 401 YCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVL 460
+ K L V +Y+ G L + S + L+ + + GL +LH + ++
Sbjct: 87 TFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY--AAEIILGLQFLHS---KGIV 141
Query: 461 HRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTST 520
+RD+K N+LLD D K+ DFG+ + G D T GT Y+APE+L + S
Sbjct: 142 YRDLKLDNILLDKDGHIKIADFGMCKENMLG-DAKTNEFCGTPDYIAPEILLGQKYNHSV 200
Query: 521 DVYAFGVFMLEVACGRRP 538
D ++FGV + E+ G+ P
Sbjct: 201 DWWSFGVLLYEMLIGQSP 218
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 12/211 (5%)
Query: 332 SPHRFSYKNLYKATKGGSGKVY--RGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGK 389
PH +Y+ L KG KV R +L I + + +++ E+ M
Sbjct: 11 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKI 70
Query: 390 LRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-PSLNWFQRFRIIKGVAFGL 448
L H N+V+L + L L+ +Y G + L ++ R +FR + +
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAV 127
Query: 449 LYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAP 508
Y H++ ++HRD+K N+LLDAD+ K+ DFG + + G L G Y AP
Sbjct: 128 QYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA--FCGAPPYAAP 182
Query: 509 ELLRNGR-GTTSTDVYAFGVFMLEVACGRRP 538
EL + + DV++ GV + + G P
Sbjct: 183 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 92/184 (50%), Gaps = 26/184 (14%)
Query: 366 VKKVCHDSDHGMKQFVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYMPNGSL---- 420
+K+ DH + F E+ + KL H N++ L G C +G L L +Y P+G+L
Sbjct: 57 MKEYASKDDH--RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 114
Query: 421 --DKILYSN--------TRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVL 470
++L ++ T +L+ Q VA G+ YL ++ +HR++ N+L
Sbjct: 115 RKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRNLAARNIL 171
Query: 471 LDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTDVYAFGVF 528
+ + K+ DFGL+R G +++ +G V ++A E L TT++DV+++GV
Sbjct: 172 VGENYVAKIADFGLSR----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL 227
Query: 529 MLEV 532
+ E+
Sbjct: 228 LWEI 231
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 25/217 (11%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQ 397
Y +L GG+G V+ V +A+KK+ +K + EI + +L H N+V+
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 398 L--------------RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKG 443
+ G + +V +YM L +L P L R + +
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQG--PLLEEHARLFMYQ- 128
Query: 444 VAFGLLYLHEEWEQVVLHRDIKPANVLLDA-DLEGKLGDFGLARLYD--HGNDLHTTNVV 500
+ GL Y+H VLHRD+KPAN+ ++ DL K+GDFGLAR+ D + + H + +
Sbjct: 129 LLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGL 185
Query: 501 GTVGYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGR 536
T Y +P LL + T + D++A G E+ G+
Sbjct: 186 VTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 12/198 (6%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKK-----VCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRG 400
KG GKV+ ++ A+K V D D ++S+ H L +
Sbjct: 27 KGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-WEHPFLTHMFC 85
Query: 401 YCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVL 460
+ K L V +Y+ G L + S + L+ + + GL +LH + ++
Sbjct: 86 TFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY--AAEIILGLQFLHS---KGIV 140
Query: 461 HRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTST 520
+RD+K N+LLD D K+ DFG+ + G D T GT Y+APE+L + S
Sbjct: 141 YRDLKLDNILLDKDGHIKIADFGMCKENMLG-DAKTNXFCGTPDYIAPEILLGQKYNHSV 199
Query: 521 DVYAFGVFMLEVACGRRP 538
D ++FGV + E+ G+ P
Sbjct: 200 DWWSFGVLLYEMLIGQSP 217
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 70/148 (47%), Gaps = 10/148 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
+VQL + L +V +YMP G L ++ SN W + + V L +H
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVNLM-SNYDVPEKWAKFY--TAEVVLALDAIHS- 192
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
++HRD+KP N+LLD KL DFG D +H VGT Y++PE+L++
Sbjct: 193 --MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQ 250
Query: 515 RGT----TSTDVYAFGVFMLEVACGRRP 538
G D ++ GVF+ E+ G P
Sbjct: 251 GGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 92/192 (47%), Gaps = 10/192 (5%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G GKVY+ + A K + S+ ++ ++ EI + H N+V+L +
Sbjct: 48 GAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 107
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
L ++ ++ G++D ++ RP L Q + K L YLH + ++HRD+K
Sbjct: 108 NLWILIEFCAGGAVDAVMLELERP-LTESQIQVVCKQTLDALNYLH---DNKIIHRDLKA 163
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL-----RNGRGTTSTD 521
N+L D + KL DFG++ + + +GT ++APE++ ++ D
Sbjct: 164 GNILFTLDGDIKLADFGVSA-KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKAD 222
Query: 522 VYAFGVFMLEVA 533
V++ G+ ++E+A
Sbjct: 223 VWSLGITLIEMA 234
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 387 MGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGVA 445
M +L H V+L + +L Y NG L K Y S + RF + V+
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLK--YIRKIGSFDETCTRFYTAEIVS 143
Query: 446 FGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVG 504
L YLH + ++HRD+KP N+LL+ D+ ++ DFG A+ L + VGT
Sbjct: 144 -ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 199
Query: 505 YLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPG 542
Y++PELL + S+D++A G + ++ G P + G
Sbjct: 200 YVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 92/192 (47%), Gaps = 10/192 (5%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G GKVY+ + A K + S+ ++ ++ EI + H N+V+L +
Sbjct: 48 GAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 107
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
L ++ ++ G++D ++ RP L Q + K L YLH + ++HRD+K
Sbjct: 108 NLWILIEFCAGGAVDAVMLELERP-LTESQIQVVCKQTLDALNYLH---DNKIIHRDLKA 163
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL-----RNGRGTTSTD 521
N+L D + KL DFG++ + + +GT ++APE++ ++ D
Sbjct: 164 GNILFTLDGDIKLADFGVSA-KNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKAD 222
Query: 522 VYAFGVFMLEVA 533
V++ G+ ++E+A
Sbjct: 223 VWSLGITLIEMA 234
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 92/201 (45%), Gaps = 11/201 (5%)
Query: 346 KGGSGKVYRGVLPSS---HAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
+GG G+V+ + ++ +A + K G + + E + K+ R +V L
Sbjct: 195 RGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAF 254
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRII---KGVAFGLLYLHEEWEQVV 459
K +L LV M G + +Y N FQ R I + GL +LH+ + +
Sbjct: 255 ETKTDLCLVMTIMNGGDIRYHIY-NVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNI 310
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
++RD+KP NVLLD D ++ D GLA G T GT G++APELL S
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ-TKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 520 TDVYAFGVFMLEVACGRRPVQ 540
D +A GV + E+ R P +
Sbjct: 370 VDYFALGVTLYEMIAARGPFR 390
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 92/201 (45%), Gaps = 11/201 (5%)
Query: 346 KGGSGKVYRGVLPSS---HAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
+GG G+V+ + ++ +A + K G + + E + K+ R +V L
Sbjct: 195 RGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAF 254
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRII---KGVAFGLLYLHEEWEQVV 459
K +L LV M G + +Y N FQ R I + GL +LH+ + +
Sbjct: 255 ETKTDLCLVMTIMNGGDIRYHIY-NVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNI 310
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
++RD+KP NVLLD D ++ D GLA G T GT G++APELL S
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ-TKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 520 TDVYAFGVFMLEVACGRRPVQ 540
D +A GV + E+ R P +
Sbjct: 370 VDYFALGVTLYEMIAARGPFR 390
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 123/281 (43%), Gaps = 46/281 (16%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK--KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCR 403
KG G+VY G H E+A++ + D++ +K F E+++ + RH N+V G C
Sbjct: 43 KGRFGQVYHG---RWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM 99
Query: 404 RKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRD 463
L ++ +L ++ + + L+ + +I + + G+ YLH + +LH+D
Sbjct: 100 SPPHLAIITSLCKGRTLYSVV-RDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKD 155
Query: 464 IKPANVLLDADLEGK--LGDFGLARLY------DHGNDLHTTNVVGTVGYLAPELLRNGR 515
+K NV D GK + DFGL + + L N G + +LAPE++R
Sbjct: 156 LKSKNVFYD---NGKVVITDFGLFSISGVLQAGRREDKLRIQN--GWLCHLAPEIIRQLS 210
Query: 516 GTTS---------TDVYAFGVFMLEVACGRRP--VQPGELDLLDWVIDYWQKGDVLDASD 564
T +DV+A G E+ P QP E + WQ G
Sbjct: 211 PDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAII-------WQMG---TGMK 260
Query: 565 PRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
P L I + +++ +L LFC + RP+ +++ L+
Sbjct: 261 PNLSQIGMGKEISDIL---LFCWAFEQEERPTFTKLMDMLE 298
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 92/201 (45%), Gaps = 11/201 (5%)
Query: 346 KGGSGKVYRGVLPSS---HAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
+GG G+V+ + ++ +A + K G + + E + K+ R +V L
Sbjct: 195 RGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAF 254
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRII---KGVAFGLLYLHEEWEQVV 459
K +L LV M G + +Y N FQ R I + GL +LH+ + +
Sbjct: 255 ETKTDLCLVMTIMNGGDIRYHIY-NVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNI 310
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
++RD+KP NVLLD D ++ D GLA G T GT G++APELL S
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ-TKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 520 TDVYAFGVFMLEVACGRRPVQ 540
D +A GV + E+ R P +
Sbjct: 370 VDYFALGVTLYEMIAARGPFR 390
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 92/201 (45%), Gaps = 11/201 (5%)
Query: 346 KGGSGKVYRGVLPSS---HAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC 402
+GG G+V+ + ++ +A + K G + + E + K+ R +V L
Sbjct: 195 RGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAF 254
Query: 403 RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRII---KGVAFGLLYLHEEWEQVV 459
K +L LV M G + +Y N FQ R I + GL +LH+ + +
Sbjct: 255 ETKTDLCLVMTIMNGGDIRYHIY-NVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNI 310
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
++RD+KP NVLLD D ++ D GLA G T GT G++APELL S
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ-TKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 520 TDVYAFGVFMLEVACGRRPVQ 540
D +A GV + E+ R P +
Sbjct: 370 VDYFALGVTLYEMIAARGPFR 390
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 347 GGSGKVYRG--VLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRR 404
G G+VY+G V A I V V D + +KQ ++ + HRN+ G +
Sbjct: 35 GTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS--HHRNIATYYGAFIK 92
Query: 405 KG------ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
K +L LV ++ GS+ ++ + +L I + + GL +LH+
Sbjct: 93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ---HK 149
Query: 459 VLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTT 518
V+HRDIK NVLL + E KL DFG++ D T +GT ++APE++
Sbjct: 150 VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT-FIGTPYWMAPEVIACDENPD 208
Query: 519 ST-----DVYAFGVFMLEVACGRRPV 539
+T D+++ G+ +E+A G P+
Sbjct: 209 ATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 124/288 (43%), Gaps = 47/288 (16%)
Query: 347 GGSGKVYR----GVLPSSHAEIAVKKVCHDSDHGMKQ--FVSEIVSMGKL-RHRNLVQLR 399
G GKV G++ S A K+ S H ++ +SE+ + L H N+V L
Sbjct: 57 GAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLL 116
Query: 400 GYCRRKGELLLVYDYMPNGSL--------DKILYSNTRPSLNWFQ------------RFR 439
G C G L++ +Y G L D + S T P++ ++
Sbjct: 117 GACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQ 176
Query: 440 IIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTN 498
+ KG+AF + +HRD+ N+LL K+ DFGLAR + + N + N
Sbjct: 177 VAKGMAFLA-------SKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGN 229
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKG 557
V ++APE + N T +DV+++G+F+ E+ + G P +D +
Sbjct: 230 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY-------- 281
Query: 558 DVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
++ L + +M ++K C ++P RP+ +Q+VQ ++
Sbjct: 282 KMIKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 326
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 124/288 (43%), Gaps = 47/288 (16%)
Query: 347 GGSGKVYR----GVLPSSHAEIAVKKVCHDSDHGMKQ--FVSEIVSMGKL-RHRNLVQLR 399
G GKV G++ S A K+ S H ++ +SE+ + L H N+V L
Sbjct: 57 GAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLL 116
Query: 400 GYCRRKGELLLVYDYMPNGSL--------DKILYSNTRPSLNWFQ------------RFR 439
G C G L++ +Y G L D + S T P++ ++
Sbjct: 117 GACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQ 176
Query: 440 IIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTN 498
+ KG+AF + +HRD+ N+LL K+ DFGLAR + + N + N
Sbjct: 177 VAKGMAFLA-------SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 229
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKG 557
V ++APE + N T +DV+++G+F+ E+ + G P +D +
Sbjct: 230 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY-------- 281
Query: 558 DVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
++ L + +M ++K C ++P RP+ +Q+VQ ++
Sbjct: 282 KMIKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 326
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 346 KGGSGKVYRGVL--PSSHAEIAVKKVCHD--SDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G V++G+ P + A K C + SD ++F+ E ++M + H ++V+L G
Sbjct: 20 EGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 79
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ + ++ + G L L + SL+ ++ L YL + +H
Sbjct: 80 IT-ENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLES---KRFVH 134
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTD 521
RDI NVL+ ++ KLGDFGL+R + + + ++APE + R T+++D
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASD 194
Query: 522 VYAFGVFMLEVAC-GRRPVQ 540
V+ FGV M E+ G +P Q
Sbjct: 195 VWMFGVCMWEILMHGVKPFQ 214
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 124/288 (43%), Gaps = 47/288 (16%)
Query: 347 GGSGKVYR----GVLPSSHAEIAVKKVCHDSDHGMKQ--FVSEIVSMGKL-RHRNLVQLR 399
G GKV G++ S A K+ S H ++ +SE+ + L H N+V L
Sbjct: 50 GAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLL 109
Query: 400 GYCRRKGELLLVYDYMPNGSL--------DKILYSNTRPSLNWFQ------------RFR 439
G C G L++ +Y G L D + S T P++ ++
Sbjct: 110 GACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQ 169
Query: 440 IIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTN 498
+ KG+AF + +HRD+ N+LL K+ DFGLAR + + N + N
Sbjct: 170 VAKGMAFLA-------SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 222
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKG 557
V ++APE + N T +DV+++G+F+ E+ + G P +D +
Sbjct: 223 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY-------- 274
Query: 558 DVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
++ L + +M ++K C ++P RP+ +Q+VQ ++
Sbjct: 275 KMIKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 319
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 124/288 (43%), Gaps = 47/288 (16%)
Query: 347 GGSGKVYR----GVLPSSHAEIAVKKVCHDSDHGMKQ--FVSEIVSMGKL-RHRNLVQLR 399
G GKV G++ S A K+ S H ++ +SE+ + L H N+V L
Sbjct: 34 GAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLL 93
Query: 400 GYCRRKGELLLVYDYMPNGSL--------DKILYSNTRPSLNWFQ------------RFR 439
G C G L++ +Y G L D + S T P++ ++
Sbjct: 94 GACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQ 153
Query: 440 IIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTN 498
+ KG+AF + +HRD+ N+LL K+ DFGLAR + + N + N
Sbjct: 154 VAKGMAFLA-------SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 206
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKG 557
V ++APE + N T +DV+++G+F+ E+ + G P +D +
Sbjct: 207 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY-------- 258
Query: 558 DVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
++ L + +M ++K C ++P RP+ +Q+VQ ++
Sbjct: 259 KMIKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 303
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 387 MGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGVA 445
M +L H V+L + +L Y NG L K Y S + RF + V+
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVS 144
Query: 446 FGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVG 504
L YLH + ++HRD+KP N+LL+ D+ ++ DFG A+ L + VGT
Sbjct: 145 -ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 200
Query: 505 YLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPG 542
Y++PELL S+D++A G + ++ G P + G
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 238
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 387 MGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGVA 445
M +L H V+L + +L Y NG L K Y S + RF + V+
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVS 140
Query: 446 FGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVG 504
L YLH + ++HRD+KP N+LL+ D+ ++ DFG A+ L + VGT
Sbjct: 141 -ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 196
Query: 505 YLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPG 542
Y++PELL S+D++A G + ++ G P + G
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 234
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY---- 401
+G S V R V ++ E AVK + ++ + + E+ + L Q+ G+
Sbjct: 104 RGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHII 163
Query: 402 -----CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWE 456
+ LV+D M G L Y + +L+ + I++ + + +LH
Sbjct: 164 TLIDSYESSSFMFLVFDLMRKGEL--FDYLTEKVALSEKETRSIMRSLLEAVSFLHA--- 218
Query: 457 QVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRG 516
++HRD+KP N+LLD +++ +L DFG + + G L + GT GYLAPE+L+
Sbjct: 219 NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR--ELCGTPGYLAPEILKCSMD 276
Query: 517 TT------STDVYAFGVFMLEVACGRRP 538
T D++A GV + + G P
Sbjct: 277 ETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G GKVY+ + A K + S+ ++ ++ EI + H N+V+L +
Sbjct: 48 GAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 107
Query: 407 ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
L ++ ++ G++D ++ RP L Q + K L YLH + ++HRD+K
Sbjct: 108 NLWILIEFCAGGAVDAVMLELERP-LTESQIQVVCKQTLDALNYLH---DNKIIHRDLKA 163
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL-----RNGRGTTSTD 521
N+L D + KL DFG++ + +GT ++APE++ ++ D
Sbjct: 164 GNILFTLDGDIKLADFGVSA-KNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKAD 222
Query: 522 VYAFGVFMLEVA 533
V++ G+ ++E+A
Sbjct: 223 VWSLGITLIEMA 234
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 115/265 (43%), Gaps = 36/265 (13%)
Query: 363 EIAVKKVCHDSDHGMKQ-FVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYMPNGSL 420
++AVK + + K+ +SE+ M L +H N+V L G C G +L++ +Y G L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 421 DKILYSNTR------------PSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPAN 468
L +R +L+ VA G+ +L + +HRD+ N
Sbjct: 138 LNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARN 194
Query: 469 VLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFGV 527
VLL K+GDFGLAR + + N + N V ++APE + + T +DV+++G+
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
Query: 528 FMLEV-ACGRRPVQPGEL---DLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLG 583
+ E+ + G P PG L V D +Q A P+ IY Q
Sbjct: 255 LLWEIFSLGLNPY-PGILVNSKFYKLVKDGYQMAQ--PAFAPK--NIYSIMQA------- 302
Query: 584 LFCSHSNPDTRPSMRQVVQYLDGGA 608
C P RP+ +Q+ +L A
Sbjct: 303 --CWALEPTHRPTFQQICSFLQEQA 325
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 6/189 (3%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRNLVQLRGYCRR 404
+G G+V+ G L + + +AVK +K +F+ E + + H N+V+L G C +
Sbjct: 124 RGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ 183
Query: 405 KGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDI 464
K + +V + + G L + L +++ A G+ YL + +HRD+
Sbjct: 184 KQPIYIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDL 239
Query: 465 KPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT-VGYLAPELLRNGRGTTSTDVY 523
N L+ K+ DFG++R G + + V + APE L GR ++ +DV+
Sbjct: 240 AARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVW 299
Query: 524 AFGVFMLEV 532
+FG+ + E
Sbjct: 300 SFGILLWET 308
>pdb|3IPV|B Chain B, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
pdb|3IPV|D Chain D, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
Length = 239
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 104/250 (41%), Gaps = 31/250 (12%)
Query: 26 EENQFIHHGFE--GSKLKLDGLAKIHPNGLLQLTNTSER------ISGHAFY--PXXXXX 75
EE F+ F+ L L G A + G+LQLTN G A Y P
Sbjct: 2 EETSFVFSKFKPLEPNLILQGDALVTVAGVLQLTNVDSNGVPEPSSLGRATYSAPINIWD 61
Query: 76 XXXXXXXXXXXXXXXXAMFPKLPNYGGHGMAFFISPSTDFSEAVAGSHLGIFNRSNNGQF 135
P + G+AFF++P ++ G LG+F+ S G
Sbjct: 62 SATGLVASFATSFRFTIYAPNIATIA-DGLAFFLAPVASAPDS-GGGFLGLFD-SAVGDT 118
Query: 136 TNHIFAIELDTVQSPEFNDIDGNHVGIDVNGLQSNESASARYFSDEKKEFESLVLESGKP 195
T A+E DT ++ F D H+G DVN + S ++ L +G+
Sbjct: 119 TYQTVAVEFDTYENTVFTDPPYTHIGFDVNSISSIKTVKWS-------------LANGEA 165
Query: 196 IQIWIDYNGQEKLVNVTLAPVPNPKPSRPLLSTSIDLSQILQDSMYVGLSAATGTR---V 252
++ I YN KL+ +L P+ K S +L+ +DLS +L + + VG SAATG +
Sbjct: 166 AKVLITYNSAVKLLVASLV-YPSSKTSF-ILADIVDLSSVLPEWVRVGFSAATGASKGYI 223
Query: 253 SDYYILGWSF 262
+ + WSF
Sbjct: 224 ETHDVFSWSF 233
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 124/288 (43%), Gaps = 47/288 (16%)
Query: 347 GGSGKVYR----GVLPSSHAEIAVKKVCHDSDHGMKQ--FVSEIVSMGKL-RHRNLVQLR 399
G GKV G++ S A K+ S H ++ +SE+ + L H N+V L
Sbjct: 52 GAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLL 111
Query: 400 GYCRRKGELLLVYDYMPNGSL--------DKILYSNTRPSLNWFQ------------RFR 439
G C G L++ +Y G L D + S T P++ ++
Sbjct: 112 GACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQ 171
Query: 440 IIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTN 498
+ KG+AF + +HRD+ N+LL K+ DFGLAR + + N + N
Sbjct: 172 VAKGMAFLA-------SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 224
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKG 557
V ++APE + N T +DV+++G+F+ E+ + G P +D +
Sbjct: 225 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS--------KFY 276
Query: 558 DVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
++ L + +M ++K C ++P RP+ +Q+VQ ++
Sbjct: 277 KMIKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 321
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 10/200 (5%)
Query: 346 KGGSGKVYRGVL--PSSHAEIAVKKVCHD--SDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G V++G+ P + A K C + SD ++F+ E ++M + H ++V+L G
Sbjct: 20 EGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 79
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ + ++ + G L L + SL+ ++ L YL + +H
Sbjct: 80 IT-ENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLES---KRFVH 134
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTD 521
RDI NVL+ A KLGDFGL+R + + + ++APE + R T+++D
Sbjct: 135 RDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASD 194
Query: 522 VYAFGVFMLEVAC-GRRPVQ 540
V+ FGV M E+ G +P Q
Sbjct: 195 VWMFGVCMWEILMHGVKPFQ 214
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 10/200 (5%)
Query: 346 KGGSGKVYRGVL--PSSHAEIAVKKVCHD--SDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G V++G+ P + A K C + SD ++F+ E ++M + H ++V+L G
Sbjct: 400 EGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 459
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ + ++ + G L L + SL+ ++ L YL + +H
Sbjct: 460 IT-ENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLES---KRFVH 514
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTD 521
RDI NVL+ A KLGDFGL+R + + + ++APE + R T+++D
Sbjct: 515 RDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASD 574
Query: 522 VYAFGVFMLEVAC-GRRPVQ 540
V+ FGV M E+ G +P Q
Sbjct: 575 VWMFGVCMWEILMHGVKPFQ 594
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 92/200 (46%), Gaps = 15/200 (7%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
KG V R V + E A K K DH + + I + L+H N+V+L
Sbjct: 14 KGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRL--LKHSNIVRLHDS 71
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+G LV+D + G L + + + R + I+ + +L+ H+ V+H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVA--REYYSEADASHCIQQILEAVLHCHQ---MGVVH 126
Query: 462 RDIKPANVLLDADLEG---KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTT 518
RD+KP N+LL + +G KL DFGLA + G+ GT GYL+PE+LR
Sbjct: 127 RDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGK 185
Query: 519 STDVYAFGVFMLEVACGRRP 538
D++A GV + + G P
Sbjct: 186 PVDIWACGVILYILLVGYPP 205
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 387 MGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGVA 445
M +L H V+L + +L Y NG L K Y S + RF + V+
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVS 141
Query: 446 FGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVG 504
L YLH + ++HRD+KP N+LL+ D+ ++ DFG A+ L VGT
Sbjct: 142 -ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 505 YLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPG 542
Y++PELL S+D++A G + ++ G P + G
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 235
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 10/159 (6%)
Query: 387 MGKLRHRNLVQLRGYCRRKGELLLV-YDYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
M +L H V+L +C + E L Y NG L K Y S + RF + V
Sbjct: 91 MSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIV 147
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTV 503
+ L YLH + ++HRD+KP N+LL+ D+ ++ DFG A+ L VGT
Sbjct: 148 S-ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 203
Query: 504 GYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPG 542
Y++PELL S+D++A G + ++ G P + G
Sbjct: 204 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 242
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 387 MGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGVA 445
M +L H V+L + +L Y NG L K Y S + RF + V+
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVS 141
Query: 446 FGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVG 504
L YLH + ++HRD+KP N+LL+ D+ ++ DFG A+ L VGT
Sbjct: 142 -ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 505 YLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPG 542
Y++PELL S+D++A G + ++ G P + G
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 235
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 15/208 (7%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRHR 393
Y+ + KG V R V + E A K K DH + + I + L+H
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRL--LKHP 81
Query: 394 NLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
N+V+L +G L++D + G L + + + R + I+ + +L+ H+
Sbjct: 82 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVA--REYYSEADASHCIQQILEAVLHCHQ 139
Query: 454 EWEQVVLHRDIKPANVLLDADLEG---KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPEL 510
V+HRD+KP N+LL + L+G KL DFGLA + G GT GYL+PE+
Sbjct: 140 ---MGVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEV 195
Query: 511 LRNGRGTTSTDVYAFGVFMLEVACGRRP 538
LR D++A GV + + G P
Sbjct: 196 LRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 113/267 (42%), Gaps = 38/267 (14%)
Query: 363 EIAVKKVCHDSDHGMKQ-FVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYMPNGSL 420
++AVK + + K+ +SE+ M L +H N+V L G C G +L++ +Y G L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 421 DKILYSNTRPSLNWFQR--------------FRIIKGVAFGLLYLHEEWEQVVLHRDIKP 466
L P L + VA G+ +L + +HRD+
Sbjct: 138 LNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLAS---KNCIHRDVAA 194
Query: 467 ANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAF 525
NVLL K+GDFGLAR + + N + N V ++APE + + T +DV+++
Sbjct: 195 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 254
Query: 526 GVFMLEV-ACGRRPVQPGEL---DLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLK 581
G+ + E+ + G P PG L V D +Q A P+ IY Q
Sbjct: 255 GILLWEIFSLGLNPY-PGILVNSKFYKLVKDGYQMAQ--PAFAPK--NIYSIMQA----- 304
Query: 582 LGLFCSHSNPDTRPSMRQVVQYLDGGA 608
C P RP+ +Q+ +L A
Sbjct: 305 ----CWALEPTHRPTFQQICSFLQEQA 327
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 387 MGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGVA 445
M +L H V+L + +L Y NG L K Y S + RF + V+
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVS 143
Query: 446 FGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVG 504
L YLH + ++HRD+KP N+LL+ D+ ++ DFG A+ L VGT
Sbjct: 144 -ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 505 YLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPG 542
Y++PELL S+D++A G + ++ G P + G
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 387 MGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGVA 445
M +L H V+L + +L Y NG L K Y S + RF + V+
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVS 141
Query: 446 FGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVG 504
L YLH + ++HRD+KP N+LL+ D+ ++ DFG A+ L VGT
Sbjct: 142 -ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 505 YLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPG 542
Y++PELL S+D++A G + ++ G P + G
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 235
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 387 MGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGVA 445
M +L H V+L + +L Y NG L K Y S + RF + V+
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVS 143
Query: 446 FGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVG 504
L YLH + ++HRD+KP N+LL+ D+ ++ DFG A+ L VGT
Sbjct: 144 -ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 505 YLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPG 542
Y++PELL S+D++A G + ++ G P + G
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 387 MGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGVA 445
M +L H V+L + +L Y NG L K Y S + RF + V+
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVS 144
Query: 446 FGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVG 504
L YLH + ++HRD+KP N+LL+ D+ ++ DFG A+ L VGT
Sbjct: 145 -ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 200
Query: 505 YLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPG 542
Y++PELL S+D++A G + ++ G P + G
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 238
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 387 MGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGVA 445
M +L H V+L + +L Y NG L K Y S + RF + V+
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVS 143
Query: 446 FGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVG 504
L YLH + ++HRD+KP N+LL+ D+ ++ DFG A+ L VGT
Sbjct: 144 -ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 505 YLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPG 542
Y++PELL S+D++A G + ++ G P + G
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 346 KGGSGKVYRGVL--PSSHAEIAVKKVCHD--SDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G V++G+ P + A K C + SD ++F+ E ++M + H ++V+L G
Sbjct: 20 EGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 79
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ + ++ + G L L + SL+ ++ L YL + +H
Sbjct: 80 IT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLES---KRFVH 134
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTD 521
RDI NVL+ ++ KLGDFGL+R + + + ++APE + R T+++D
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASD 194
Query: 522 VYAFGVFMLEVAC-GRRPVQ 540
V+ FGV M E+ G +P Q
Sbjct: 195 VWMFGVCMWEILMHGVKPFQ 214
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 23/224 (10%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQ------FVSEIVSMGKLR 391
YK KG G+V + E AVK + S +KQ + E+ + +L
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVI---SKRQVKQKTDKESLLREVQLLKQLD 84
Query: 392 HRNLVQLRGYCRRKGELLLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLY 450
H N+ +L + KG LV + G L D+I+ +R + RII+ V G+ Y
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEII---SRKRFSEVDAARIIRQVLSGITY 141
Query: 451 LHEEWEQVVLHRDIKPANVLLDA---DLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLA 507
H+ ++HRD+KP N+LL++ D ++ DFGL+ ++ + +GT Y+A
Sbjct: 142 XHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK--KXKDKIGTAYYIA 196
Query: 508 PELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQ-PGELDLLDWV 550
PE+L +G DV++ GV + + G P E D+L V
Sbjct: 197 PEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 239
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 8/163 (4%)
Query: 387 MGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGVA 445
M +L H V+L + +L Y NG L K Y S + RF + V+
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVS 143
Query: 446 FGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVG 504
L YLH + ++HRD+KP N+LL+ D+ ++ DFG A+ L VGT
Sbjct: 144 -ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 505 YLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLL 547
Y++PELL S+D++A G + ++ G P + G L+
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLI 242
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 346 KGGSGKVYRGVL--PSSHAEIAVKKVCHD--SDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G V++G+ P + A K C + SD ++F+ E ++M + H ++V+L G
Sbjct: 48 EGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 107
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ + ++ + G L L + SL+ ++ L YL + +H
Sbjct: 108 IT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLES---KRFVH 162
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTD 521
RDI NVL+ ++ KLGDFGL+R + + + ++APE + R T+++D
Sbjct: 163 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASD 222
Query: 522 VYAFGVFMLEVAC-GRRPVQ 540
V+ FGV M E+ G +P Q
Sbjct: 223 VWMFGVCMWEILMHGVKPFQ 242
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 346 KGGSGKVYRGVL--PSSHAEIAVKKVCHD--SDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G V++G+ P + A K C + SD ++F+ E ++M + H ++V+L G
Sbjct: 400 EGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 459
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ + ++ + G L L + SL+ ++ L YL + +H
Sbjct: 460 IT-ENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLES---KRFVH 514
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTD 521
RDI NVL+ ++ KLGDFGL+R + + + ++APE + R T+++D
Sbjct: 515 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASD 574
Query: 522 VYAFGVFMLEVAC-GRRPVQ 540
V+ FGV M E+ G +P Q
Sbjct: 575 VWMFGVCMWEILMHGVKPFQ 594
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 387 MGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGVA 445
M +L H V+L + +L Y NG L K Y S + RF + V+
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVS 141
Query: 446 FGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNV-VGTVG 504
L YLH + ++HRD+KP N+LL+ D+ ++ DFG A++ + N VGT
Sbjct: 142 -ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQ 197
Query: 505 YLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPG 542
Y++PELL S+D++A G + ++ G P + G
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 235
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 387 MGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGVA 445
M +L H V+L + +L Y NG L K Y S + RF + V+
Sbjct: 89 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVS 146
Query: 446 FGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVG 504
L YLH + ++HRD+KP N+LL+ D+ ++ DFG A+ L VGT
Sbjct: 147 -ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 202
Query: 505 YLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPG 542
Y++PELL S+D++A G + ++ G P + G
Sbjct: 203 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 240
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 387 MGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGVA 445
M +L H V+L + +L Y NG L K Y S + RF + V+
Sbjct: 68 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVS 125
Query: 446 FGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVG 504
L YLH + ++HRD+KP N+LL+ D+ ++ DFG A+ L VGT
Sbjct: 126 -ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 181
Query: 505 YLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPG 542
Y++PELL S+D++A G + ++ G P + G
Sbjct: 182 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 219
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 14/193 (7%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMK-QFVSEIVSMGKLRHRNLVQLRGYCRR 404
+G G+V+ G L + + +AVK +K +F+ E + + H N+V+L G C +
Sbjct: 124 RGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ 183
Query: 405 KGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDI 464
K + +V + + G L + L +++ A G+ YL + +HRD+
Sbjct: 184 KQPIYIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDL 239
Query: 465 KPANVLLDADLEGKLGDFGLAR-----LYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
N L+ K+ DFG++R +Y L V + APE L GR ++
Sbjct: 240 AARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQV----PVKWTAPEALNYGRYSSE 295
Query: 520 TDVYAFGVFMLEV 532
+DV++FG+ + E
Sbjct: 296 SDVWSFGILLWET 308
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 8/163 (4%)
Query: 387 MGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGVA 445
M +L H V+L + +L Y NG L K Y S + RF + V+
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVS 143
Query: 446 FGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVG 504
L YLH + ++HRD+KP N+LL+ D+ ++ DFG A+ L VGT
Sbjct: 144 -ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 505 YLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLL 547
Y++PELL S+D++A G + ++ G P + G L+
Sbjct: 200 YVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLI 242
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 387 MGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGVA 445
M +L H V+L + +L Y NG L K Y S + RF + V+
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVS 140
Query: 446 FGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVG 504
L YLH + ++HRD+KP N+LL+ D+ ++ DFG A+ L VGT
Sbjct: 141 -ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 196
Query: 505 YLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPG 542
Y++PELL S+D++A G + ++ G P + G
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 234
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 35/268 (13%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G G V+R ++ A K V + + EI +M LRH LV L
Sbjct: 168 GAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN 227
Query: 407 ELLLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIK 465
E++++Y++M G L +K+ + + S + + ++ V GL ++H E +H D+K
Sbjct: 228 EMVMIYEFMSGGELFEKVADEHNKMSED--EAVEYMRQVCKGLCHMH---ENNYVHLDLK 282
Query: 466 PANVLLDADL--EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVY 523
P N++ E KL DFGL D + T GT + APE+ TD++
Sbjct: 283 PENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT--TGTAEFAAPEVAEGKPVGYYTDMW 340
Query: 524 AFGVFMLEVACGRRPVQPGELD--------LLDWVIDYWQKGDVLDASDPRLEGIYVEEQ 575
+ GV + G P GE D DW +D D GI E+
Sbjct: 341 SVGVLSYILLSGLSPFG-GENDDETLRNVKSCDWNMD-----------DSAFSGI-SEDG 387
Query: 576 MEIVLKLGLFCSHSNPDTRPSMRQVVQY 603
+ + KL L ++P+TR ++ Q +++
Sbjct: 388 KDFIRKLLL----ADPNTRMTIHQALEH 411
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 387 MGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGVA 445
M +L H V+L + +L Y NG L K Y S + RF + V+
Sbjct: 64 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVS 121
Query: 446 FGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVG 504
L YLH + ++HRD+KP N+LL+ D+ ++ DFG A+ L VGT
Sbjct: 122 -ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 177
Query: 505 YLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPG 542
Y++PELL S+D++A G + ++ G P + G
Sbjct: 178 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 215
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 346 KGGSGKVYRGVL--PSSHAEIAVKKVCHD--SDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G V++G+ P + A K C + SD ++F+ E ++M + H ++V+L G
Sbjct: 17 EGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 76
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ + ++ + G L L + SL+ ++ L YL + +H
Sbjct: 77 IT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLES---KRFVH 131
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTD 521
RDI NVL+ ++ KLGDFGL+R + + + ++APE + R T+++D
Sbjct: 132 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASD 191
Query: 522 VYAFGVFMLEVAC-GRRPVQ 540
V+ FGV M E+ G +P Q
Sbjct: 192 VWMFGVCMWEILMHGVKPFQ 211
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 13/213 (6%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKK-----VCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRG 400
KG GKV + + AVK + D D I+S+ + H L QL
Sbjct: 33 KGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR-NHPFLTQLFC 91
Query: 401 YCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVL 460
+ L V +++ G L +R RF + ++ L++LH+ + ++
Sbjct: 92 CFQTPDRLFFVMEFVNGGDL-MFHIQKSRRFDEARARFYAAEIIS-ALMFLHD---KGII 146
Query: 461 HRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTST 520
+RD+K NVLLD + KL DFG+ + N + T GT Y+APE+L+ +
Sbjct: 147 YRDLKLDNVLLDHEGHCKLADFGMCK-EGICNGVTTATFCGTPDYIAPEILQEMLYGPAV 205
Query: 521 DVYAFGVFMLEVACGRRPVQP-GELDLLDWVID 552
D +A GV + E+ CG P + E DL + +++
Sbjct: 206 DWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN 238
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 387 MGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGVA 445
M +L H V+L + +L Y NG L K Y S + RF + V+
Sbjct: 63 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVS 120
Query: 446 FGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVG 504
L YLH + ++HRD+KP N+LL+ D+ ++ DFG A+ L VGT
Sbjct: 121 -ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 176
Query: 505 YLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPG 542
Y++PELL S+D++A G + ++ G P + G
Sbjct: 177 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 214
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 97/193 (50%), Gaps = 19/193 (9%)
Query: 363 EIAVKKV--CHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRK---GELLLVY---DY 414
++A+KK+ D K+ + E+ + +H N++ ++ R GE VY D
Sbjct: 82 QVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDL 141
Query: 415 MPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDAD 474
M L +I++S+ +L + F + + GL Y+H V+HRD+KP+N+L++ +
Sbjct: 142 M-ESDLHQIIHSSQPLTLEHVRYF--LYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNEN 195
Query: 475 LEGKLGDFGLARLYDHGNDLH---TTNVVGTVGYLAPELLRN-GRGTTSTDVYAFGVFML 530
E K+GDFG+AR H T V T Y APEL+ + T + D+++ G
Sbjct: 196 CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFG 255
Query: 531 EVACGRRPVQPGE 543
E+ RR + PG+
Sbjct: 256 EM-LARRQLFPGK 267
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 346 KGGSGKVYRGVL--PSSHAEIAVKKVCHD--SDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G V++G+ P + A K C + SD ++F+ E ++M + H ++V+L G
Sbjct: 22 EGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 81
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ + ++ + G L L + SL+ ++ L YL + +H
Sbjct: 82 IT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLES---KRFVH 136
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTD 521
RDI NVL+ ++ KLGDFGL+R + + + ++APE + R T+++D
Sbjct: 137 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASD 196
Query: 522 VYAFGVFMLEVAC-GRRPVQ 540
V+ FGV M E+ G +P Q
Sbjct: 197 VWMFGVCMWEILMHGVKPFQ 216
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 107/224 (47%), Gaps = 34/224 (15%)
Query: 336 FSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVS-EIVSMGKLRHRN 394
+Y N G G V++ L S E+A+KKV D K+F + E+ M ++H N
Sbjct: 40 IAYTNCKVIGNGSFGVVFQAKLVESD-EVAIKKVLQD-----KRFKNRELQIMRIVKHPN 93
Query: 395 LVQLRGYCRRKGE------LLLVYDYMPNGSLDKILYSNTR--PSLNWFQRFRIIKGVAF 446
+V L+ + G+ L LV +Y+P + +Y +R L +IK +
Sbjct: 94 VVDLKAFFYSNGDKKDEVFLNLVLEYVP-----ETVYRASRHYAKLKQTMPMLLIKLYMY 148
Query: 447 GLL----YLHEEWEQVVLHRDIKPANVLLDADLEG--KLGDFGLARLYDHGNDLHTTNVV 500
LL Y+H + HRDIKP N+LLD G KL DFG A++ G + +
Sbjct: 149 QLLRSLAYIHSIG---ICHRDIKPQNLLLDPP-SGVLKLIDFGSAKILIAGEP--NVSXI 202
Query: 501 GTVGYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQPGE 543
+ Y APEL+ TT+ D+++ G M E+ G +P+ PGE
Sbjct: 203 CSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQG-QPLFPGE 245
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 346 KGGSGKVYRGVL--PSSHAEIAVKKVCHD--SDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G V++G+ P + A K C + SD ++F+ E ++M + H ++V+L G
Sbjct: 20 EGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 79
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ + ++ + G L L + SL+ ++ L YL + +H
Sbjct: 80 IT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLES---KRFVH 134
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTD 521
RDI NVL+ ++ KLGDFGL+R + + + ++APE + R T+++D
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASD 194
Query: 522 VYAFGVFMLEVAC-GRRPVQ 540
V+ FGV M E+ G +P Q
Sbjct: 195 VWMFGVCMWEILMHGVKPFQ 214
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 387 MGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGVA 445
M +L H V+L + +L Y NG L K Y S + RF + V+
Sbjct: 61 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVS 118
Query: 446 FGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVG 504
L YLH + ++HRD+KP N+LL+ D+ ++ DFG A+ L VGT
Sbjct: 119 -ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 174
Query: 505 YLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPG 542
Y++PELL S+D++A G + ++ G P + G
Sbjct: 175 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 212
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 97/193 (50%), Gaps = 19/193 (9%)
Query: 363 EIAVKKV--CHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRK---GELLLVY---DY 414
++A+KK+ D K+ + E+ + +H N++ ++ R GE VY D
Sbjct: 81 QVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDL 140
Query: 415 MPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDAD 474
M L +I++S+ +L + F + + GL Y+H V+HRD+KP+N+L++ +
Sbjct: 141 M-ESDLHQIIHSSQPLTLEHVRYF--LYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNEN 194
Query: 475 LEGKLGDFGLARLYDHGNDLH---TTNVVGTVGYLAPELLRN-GRGTTSTDVYAFGVFML 530
E K+GDFG+AR H T V T Y APEL+ + T + D+++ G
Sbjct: 195 CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFG 254
Query: 531 EVACGRRPVQPGE 543
E+ RR + PG+
Sbjct: 255 EM-LARRQLFPGK 266
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 387 MGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGVA 445
M +L H V+L + +L Y NG L K Y S + RF + V+
Sbjct: 62 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVS 119
Query: 446 FGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVG 504
L YLH + ++HRD+KP N+LL+ D+ ++ DFG A+ L VGT
Sbjct: 120 -ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 175
Query: 505 YLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPG 542
Y++PELL S+D++A G + ++ G P + G
Sbjct: 176 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 213
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 346 KGGSGKVYRGVL--PSSHAEIAVKKVCHD--SDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G V++G+ P + A K C + SD ++F+ E ++M + H ++V+L G
Sbjct: 25 EGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 84
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ + ++ + G L L + SL+ ++ L YL + +H
Sbjct: 85 IT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLES---KRFVH 139
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTD 521
RDI NVL+ ++ KLGDFGL+R + + + ++APE + R T+++D
Sbjct: 140 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASD 199
Query: 522 VYAFGVFMLEVAC-GRRPVQ 540
V+ FGV M E+ G +P Q
Sbjct: 200 VWMFGVCMWEILMHGVKPFQ 219
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 35/268 (13%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G G V+R ++ A K V + + EI +M LRH LV L
Sbjct: 62 GAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN 121
Query: 407 ELLLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIK 465
E++++Y++M G L +K+ + + S + + ++ V GL ++H E +H D+K
Sbjct: 122 EMVMIYEFMSGGELFEKVADEHNKMSED--EAVEYMRQVCKGLCHMH---ENNYVHLDLK 176
Query: 466 PANVLLDADL--EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVY 523
P N++ E KL DFGL D + T GT + APE+ TD++
Sbjct: 177 PENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT--TGTAEFAAPEVAEGKPVGYYTDMW 234
Query: 524 AFGVFMLEVACGRRPVQPGELD--------LLDWVIDYWQKGDVLDASDPRLEGIYVEEQ 575
+ GV + G P GE D DW +D D GI E+
Sbjct: 235 SVGVLSYILLSGLSPFG-GENDDETLRNVKSCDWNMD-----------DSAFSGI-SEDG 281
Query: 576 MEIVLKLGLFCSHSNPDTRPSMRQVVQY 603
+ + KL L ++P+TR ++ Q +++
Sbjct: 282 KDFIRKLLL----ADPNTRMTIHQALEH 305
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 346 KGGSGKVYRGVL--PSSHAEIAVKKVCHD--SDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
+G G V++G+ P + A K C + SD ++F+ E ++M + H ++V+L G
Sbjct: 23 EGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 82
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ + ++ + G L L + SL+ ++ L YL + +H
Sbjct: 83 IT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLES---KRFVH 137
Query: 462 RDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTD 521
RDI NVL+ ++ KLGDFGL+R + + + ++APE + R T+++D
Sbjct: 138 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASD 197
Query: 522 VYAFGVFMLEVAC-GRRPVQ 540
V+ FGV M E+ G +P Q
Sbjct: 198 VWMFGVCMWEILMHGVKPFQ 217
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 392 HRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYL 451
H LV L + + L V +Y+ G L R RF + ++ L YL
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARFYSAE-ISLALNYL 169
Query: 452 HEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL 511
HE + +++RD+K NVLLD++ KL D+G+ + D T+ GT Y+APE+L
Sbjct: 170 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT-TSTFCGTPNYIAPEIL 225
Query: 512 RNGRGTTSTDVYAFGVFMLEVACGRRP 538
R S D +A GV M E+ GR P
Sbjct: 226 RGEDYGFSVDWWALGVLMFEMMAGRSP 252
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 25/199 (12%)
Query: 347 GGSGKVYRGV-LPSSHA-EIAVKKVCHDSDHGMK---QFVSEIVSMGKLRHRNLVQLRGY 401
G G VY+G+ +P +I V + G K +F+ E + M + H +LV+L G
Sbjct: 49 GAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGV 108
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSN-----TRPSLNWFQRFRIIKGVAFGLLYLHEEWE 456
C + LV MP+G L + ++ + ++ LNW + +A G++YL E
Sbjct: 109 CLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLEE--- 158
Query: 457 QVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVG---TVGYLAPELLRN 513
+ ++HRD+ NVL+ + K+ DFGLARL + D N G + ++A E +
Sbjct: 159 RRLVHRDLAARNVLVKSPNHVKITDFGLARLLE--GDEKEYNADGGKMPIKWMALECIHY 216
Query: 514 GRGTTSTDVYAFGVFMLEV 532
+ T +DV+++GV + E+
Sbjct: 217 RKFTHQSDVWSYGVTIWEL 235
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 123/288 (42%), Gaps = 40/288 (13%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQ-FVSEIVSMGKL-RHRN 394
++ + +AT G GK + ++AVK + + K+ +SE+ M L +H N
Sbjct: 50 AFGKVVEATAFGLGK------EDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 103
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNT---------RPSLNWFQRFRIIKGVA 445
+V L G C G +L++ +Y G L L RP L VA
Sbjct: 104 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP-LELRDLLHFSSQVA 162
Query: 446 FGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVG 504
G+ +L + +HRD+ NVLL K+GDFGLAR + + N + N V
Sbjct: 163 QGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 219
Query: 505 YLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGEL---DLLDWVIDYWQKGDVL 560
++APE + + T +DV+++G+ + E+ + G P PG L V D +Q
Sbjct: 220 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY-PGILVNSKFYKLVKDGYQMAQ-- 276
Query: 561 DASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLDGGA 608
A P+ IY Q C P RP+ +Q+ +L A
Sbjct: 277 PAFAPK--NIYSIMQA---------CWALEPTHRPTFQQICSFLQEQA 313
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 25/199 (12%)
Query: 347 GGSGKVYRGV-LPSSH-AEIAVKKVCHDSDHGMK---QFVSEIVSMGKLRHRNLVQLRGY 401
G G VY+G+ +P +I V + G K +F+ E + M + H +LV+L G
Sbjct: 26 GAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGV 85
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSN-----TRPSLNWFQRFRIIKGVAFGLLYLHEEWE 456
C + LV MP+G L + ++ + ++ LNW + +A G++YL E
Sbjct: 86 CLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLEE--- 135
Query: 457 QVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVG---TVGYLAPELLRN 513
+ ++HRD+ NVL+ + K+ DFGLARL + D N G + ++A E +
Sbjct: 136 RRLVHRDLAARNVLVKSPNHVKITDFGLARLLE--GDEKEYNADGGKMPIKWMALECIHY 193
Query: 514 GRGTTSTDVYAFGVFMLEV 532
+ T +DV+++GV + E+
Sbjct: 194 RKFTHQSDVWSYGVTIWEL 212
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
++ L E++L+ +Y G + + ++ R+IK + G+ YLH+
Sbjct: 91 VINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ- 149
Query: 455 WEQVVLHRDIKPANVLLDADL---EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL 511
++H D+KP N+LL + + K+ DFG++R H +L ++GT YLAPE+L
Sbjct: 150 --NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELR--EIMGTPEYLAPEIL 205
Query: 512 RNGRGTTSTDVYAFGVF 528
TT+TD++ G+
Sbjct: 206 NYDPITTATDMWNIGII 222
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 392 HRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYL 451
H LV L + + L V +Y+ G L R RF + ++ L YL
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARFYSAE-ISLALNYL 137
Query: 452 HEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL 511
HE + +++RD+K NVLLD++ KL D+G+ + D T+ GT Y+APE+L
Sbjct: 138 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT-TSXFCGTPNYIAPEIL 193
Query: 512 RNGRGTTSTDVYAFGVFMLEVACGRRP 538
R S D +A GV M E+ GR P
Sbjct: 194 RGEDYGFSVDWWALGVLMFEMMAGRSP 220
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 115/266 (43%), Gaps = 38/266 (14%)
Query: 363 EIAVKKVCHDSDHGMKQ-FVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYMPNGSL 420
++AVK + + K+ +SE+ M L +H N+V L G C G +L++ +Y G L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 421 DKILYSNTRPSLNWFQRFRIIKG-------------VAFGLLYLHEEWEQVVLHRDIKPA 467
L +R L F I VA G+ +L + +HRD+
Sbjct: 138 LNFLRRKSR-VLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAAR 193
Query: 468 NVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFG 526
NVLL K+GDFGLAR + + N + N V ++APE + + T +DV+++G
Sbjct: 194 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 253
Query: 527 VFMLEV-ACGRRPVQPGEL---DLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKL 582
+ + E+ + G P PG L V D +Q A P+ IY Q
Sbjct: 254 ILLWEIFSLGLNPY-PGILVNSKFYKLVKDGYQMAQ--PAFAPK--NIYSIMQA------ 302
Query: 583 GLFCSHSNPDTRPSMRQVVQYLDGGA 608
C P RP+ +Q+ +L A
Sbjct: 303 ---CWALEPTHRPTFQQICSFLQEQA 325
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 21 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 137
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 138 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 187
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 188 YRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 392 HRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYL 451
H LV L + + L V +Y+ G L R RF + ++ L YL
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARFYSAE-ISLALNYL 122
Query: 452 HEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL 511
HE + +++RD+K NVLLD++ KL D+G+ + D T+ GT Y+APE+L
Sbjct: 123 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT-TSXFCGTPNYIAPEIL 178
Query: 512 RNGRGTTSTDVYAFGVFMLEVACGRRP 538
R S D +A GV M E+ GR P
Sbjct: 179 RGEDYGFSVDWWALGVLMFEMMAGRSP 205
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 392 HRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYL 451
H LV L + + L V +Y+ G L R RF + ++ L YL
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARFYSAE-ISLALNYL 126
Query: 452 HEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL 511
HE + +++RD+K NVLLD++ KL D+G+ + D T+ GT Y+APE+L
Sbjct: 127 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT-TSXFCGTPNYIAPEIL 182
Query: 512 RNGRGTTSTDVYAFGVFMLEVACGRRP 538
R S D +A GV M E+ GR P
Sbjct: 183 RGEDYGFSVDWWALGVLMFEMMAGRSP 209
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 19/198 (9%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRR 404
G G V + S ++A+KK+ S+ K+ E++ + ++H N++ L
Sbjct: 53 GAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTP 112
Query: 405 KGELLLVYDY---MP--NGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
L YD+ MP L KI+ + ++++KG L Y+H V
Sbjct: 113 ASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKG----LKYIHSAG---V 165
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRD+KP N+ ++ D E K+ DFGLAR H D T V T Y APE++ +
Sbjct: 166 VHRDLKPGNLAVNEDCELKILDFGLAR---HA-DAEMTGYVVTRWYRAPEVILSWMHYNQ 221
Query: 520 T-DVYAFGVFMLEVACGR 536
T D+++ G M E+ G+
Sbjct: 222 TVDIWSVGCIMAEMLTGK 239
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 92/212 (43%), Gaps = 37/212 (17%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDS----DHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
KGG K Y + E+ KV S H ++ +EI L + ++V G+
Sbjct: 52 KGGFAKCYE-ITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGF 110
Query: 402 -------------CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGL 448
CRR+ L L K + T P +F R + I+GV
Sbjct: 111 FEDDDFVYVVLEICRRRSLL----------ELHKRRKAVTEPEARYFMR-QTIQGVQ--- 156
Query: 449 LYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAP 508
YLH V+HRD+K N+ L+ D++ K+GDFGLA + + T + GT Y+AP
Sbjct: 157 -YLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAP 211
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQ 540
E+L + D+++ G + + G+ P +
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 112/261 (42%), Gaps = 32/261 (12%)
Query: 363 EIAVKKVCHDSDHGMKQ-FVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYMPNGSL 420
++AVK + + K+ +SE+ M L +H N+V L G C G +L++ +Y G L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 421 DKILYSNTRPSLN--------WFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLD 472
L L+ VA G+ +L + +HRD+ NVLL
Sbjct: 138 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLT 194
Query: 473 ADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLE 531
K+GDFGLAR + + N + N V ++APE + + T +DV+++G+ + E
Sbjct: 195 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 254
Query: 532 V-ACGRRPVQPGEL---DLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGLFCS 587
+ + G P PG L V D +Q A P+ IY Q C
Sbjct: 255 IFSLGLNPY-PGILVNSKFYKLVKDGYQMAQ--PAFAPK--NIYSIMQA---------CW 300
Query: 588 HSNPDTRPSMRQVVQYLDGGA 608
P RP+ +Q+ +L A
Sbjct: 301 ALEPTHRPTFQQICSFLQEQA 321
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 19/198 (9%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRR 404
G G V + S ++A+KK+ S+ K+ E++ + ++H N++ L
Sbjct: 35 GAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTP 94
Query: 405 KGELLLVYDY---MP--NGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
L YD+ MP L KI+ + ++++KG L Y+H V
Sbjct: 95 ASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKG----LKYIHSAG---V 147
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTS 519
+HRD+KP N+ ++ D E K+ DFGLAR H D T V T Y APE++ +
Sbjct: 148 VHRDLKPGNLAVNEDCELKILDFGLAR---HA-DAEMTGYVVTRWYRAPEVILSWMHYNQ 203
Query: 520 T-DVYAFGVFMLEVACGR 536
T D+++ G M E+ G+
Sbjct: 204 TVDIWSVGCIMAEMLTGK 221
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 84/193 (43%), Gaps = 18/193 (9%)
Query: 348 GSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGE 407
+G+ Y + IA +V H V+E + RH L L+ +
Sbjct: 28 ATGRYYAMKILRKEVIIAKDEVAHT--------VTESRVLQNTRHPFLTALKYAFQTHDR 79
Query: 408 LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKG-VAFGLLYLHEEWEQVVLHRDIKP 466
L V +Y G L + +R + +R R + L YLH + V++RDIK
Sbjct: 80 LCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKL 133
Query: 467 ANVLLDADLEGKLGDFGLARL-YDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAF 525
N++LD D K+ DFGL + G + T GT YLAPE+L + + D +
Sbjct: 134 ENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGL 191
Query: 526 GVFMLEVACGRRP 538
GV M E+ CGR P
Sbjct: 192 GVVMYEMMCGRLP 204
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 120/266 (45%), Gaps = 29/266 (10%)
Query: 346 KGGSGKVYRGVLPS---SHAEIAVK--KVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRG 400
+G G V G L + ++AVK K+ + S +++F+SE M H N+++L G
Sbjct: 44 EGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLG 103
Query: 401 YCRRKG-----ELLLVYDYMPNGSLDK-ILYS--NTRPSLNWFQRF-RIIKGVAFGLLYL 451
C + +++ +M G L +LYS T P Q + + +A G+ YL
Sbjct: 104 VCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL 163
Query: 452 HEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT-VGYLAPEL 510
+ LHRD+ N +L D+ + DFGL++ G+ + V ++A E
Sbjct: 164 SN---RNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIES 220
Query: 511 LRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGI 570
L + T+ +DV+AFGV M E+A PG + + DY G L + L+ +
Sbjct: 221 LADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN--HEMYDYLLHGHRLKQPEDCLDEL 278
Query: 571 YVEEQMEIVLKLGLFCSHSNPDTRPS 596
Y EI+ C ++P RP+
Sbjct: 279 Y-----EIMYS----CWRTDPLDRPT 295
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 84/193 (43%), Gaps = 18/193 (9%)
Query: 348 GSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGE 407
+G+ Y + IA +V H V+E + RH L L+ +
Sbjct: 31 ATGRYYAMKILRKEVIIAKDEVAHT--------VTESRVLQNTRHPFLTALKYAFQTHDR 82
Query: 408 LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKG-VAFGLLYLHEEWEQVVLHRDIKP 466
L V +Y G L + +R + +R R + L YLH + V++RDIK
Sbjct: 83 LCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKL 136
Query: 467 ANVLLDADLEGKLGDFGLARL-YDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAF 525
N++LD D K+ DFGL + G + T GT YLAPE+L + + D +
Sbjct: 137 ENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGL 194
Query: 526 GVFMLEVACGRRP 538
GV M E+ CGR P
Sbjct: 195 GVVMYEMMCGRLP 207
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 21 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 137
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 138 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGXVATRW 187
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 21 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 137
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 138 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 187
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 21 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 137
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 138 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 187
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 26 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 142
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 143 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 192
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 20 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 77
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 78 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 136
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 137 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 186
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 187 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 23 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 139
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 140 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 189
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 21 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 137
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 138 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 187
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 21 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 137
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 138 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 187
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 23 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 139
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 140 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 189
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 84/193 (43%), Gaps = 18/193 (9%)
Query: 348 GSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGE 407
+G+ Y + IA +V H V+E + RH L L+ +
Sbjct: 28 ATGRYYAMKILRKEVIIAKDEVAHT--------VTESRVLQNTRHPFLTALKYAFQTHDR 79
Query: 408 LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKG-VAFGLLYLHEEWEQVVLHRDIKP 466
L V +Y G L + +R + +R R + L YLH + V++RDIK
Sbjct: 80 LCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKL 133
Query: 467 ANVLLDADLEGKLGDFGLARL-YDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAF 525
N++LD D K+ DFGL + G + T GT YLAPE+L + + D +
Sbjct: 134 ENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGL 191
Query: 526 GVFMLEVACGRRP 538
GV M E+ CGR P
Sbjct: 192 GVVMYEMMCGRLP 204
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 27 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 143
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 144 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 193
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 33 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 90
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 149
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 150 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 199
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGMKQFVSEIVSMGKLRHRNLVQLRGYCR 403
KG V R V ++ E A K + S ++ E KL+H N+V+L +
Sbjct: 16 KGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 75
Query: 404 RKGELLLVYDYMPNGSL-----DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ LV+D + G L + YS S I+ + + Y H
Sbjct: 76 EESFHYLVFDLVTGGELFEDIVAREFYSEADAS-------HCIQQILESIAYCHS---NG 125
Query: 459 VLHRDIKPANVLLDADLEG---KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR 515
++HR++KP N+LL + +G KL DFGLA + H GT GYL+PE+L+
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--GFAGTPGYLSPEVLKKDP 183
Query: 516 GTTSTDVYAFGVFMLEVACGRRP 538
+ D++A GV + + G P
Sbjct: 184 YSKPVDIWACGVILYILLVGYPP 206
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 33 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 90
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 149
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 150 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 199
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 37/212 (17%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDS----DHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
KGG K Y + E+ KV S H ++ +EI L + ++V G+
Sbjct: 52 KGGFAKCYE-ITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGF 110
Query: 402 -------------CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGL 448
CRR+ L L K + T P +F R + I+GV
Sbjct: 111 FEDDDFVYVVLEICRRRSLL----------ELHKRRKAVTEPEARYFMR-QTIQGVQ--- 156
Query: 449 LYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAP 508
YLH V+HRD+K N+ L+ D++ K+GDFGLA + + ++ GT Y+AP
Sbjct: 157 -YLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE-RKKDLCGTPNYIAP 211
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQ 540
E+L + D+++ G + + G+ P +
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 28 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 144
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 145 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 194
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 21 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 137
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 138 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 187
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 21 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 137
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 138 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 187
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 32 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 89
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 90 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 148
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 149 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 198
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 23 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 139
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 140 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 189
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 31 PER--YQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 88
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 89 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 147
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 148 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 197
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 21 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRG- 137
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 138 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 187
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 26 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 142
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 143 ---LKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDD-EMTGYVATRW 192
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 21 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 137
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 138 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 187
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 33 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHM 90
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 149
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 150 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 199
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKLRH 392
R Y++L G G V V + A++A+KK+ S+ K+ E+ + +RH
Sbjct: 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRH 83
Query: 393 RNLVQLRGYCRRKGELLLVYDY---MP--NGSLDKIL-YSNTRPSLNWFQRFRIIKGVAF 446
N++ L L D+ MP L K++ + F ++++KG
Sbjct: 84 ENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKG--- 140
Query: 447 GLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYL 506
L Y+H ++HRD+KP N+ ++ D E K+ DFGLAR D V T Y
Sbjct: 141 -LRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADS----EMXGXVVTRWYR 192
Query: 507 APELLRNG-RGTTSTDVYAFGVFMLEVACGR 536
APE++ N R T + D+++ G M E+ G+
Sbjct: 193 APEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 44 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 101
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 102 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 160
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 161 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 210
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 19 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 76
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 77 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 135
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 136 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 185
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 40 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 97
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 98 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 156
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 157 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 206
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 21 PER--YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 137
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 138 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 187
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 26 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 142
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 143 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 192
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 21 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRG- 137
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 138 ---LKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDD-EMTGYVATRW 187
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 91/194 (46%), Gaps = 27/194 (13%)
Query: 363 EIAVKKVCHDSDHGMKQ-FVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVYDYMPNGSL 420
++AVK + +D ++ +SE+ M +L H N+V L G C G + L+++Y G L
Sbjct: 77 QVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDL 136
Query: 421 -------------DKILYSNTRP--------SLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
D+I Y N + L + VA G+ +L E++ V
Sbjct: 137 LNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFL--EFKSCV 194
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAPELLRNGRGTT 518
HRD+ NVL+ K+ DFGLAR + N + N V ++APE L G T
Sbjct: 195 -HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTI 253
Query: 519 STDVYAFGVFMLEV 532
+DV+++G+ + E+
Sbjct: 254 KSDVWSYGILLWEI 267
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 85/193 (44%), Gaps = 18/193 (9%)
Query: 348 GSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGE 407
+G+ Y + IA +V H V+E + RH L L+ +
Sbjct: 33 ATGRYYAMKILRKEVIIAKDEVAHT--------VTESRVLQNTRHPFLTALKYAFQTHDR 84
Query: 408 LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKG-VAFGLLYLHEEWEQVVLHRDIKP 466
L V +Y G L + +R + +R R + L YLH + V++RDIK
Sbjct: 85 LCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKL 138
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAPELLRNGRGTTSTDVYAF 525
N++LD D K+ DFGL + + +D T GT YLAPE+L + + D +
Sbjct: 139 ENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGL 196
Query: 526 GVFMLEVACGRRP 538
GV M E+ CGR P
Sbjct: 197 GVVMYEMMCGRLP 209
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 32 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 89
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 90 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 148
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 149 ---LKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDD-EMTGYVATRW 198
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKLRHRNL 395
Y+NL G G V + +AVKK+ S K+ E+ + ++H N+
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 396 VQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGVAFGLL 449
+ L R E VY ++ L+ I+ + F ++I++G L
Sbjct: 90 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG----LK 145
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T Y APE
Sbjct: 146 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRWYRAPE 198
Query: 510 LLRNGRGTTST-DVYAFGVFMLEVACGR 536
++ N T D+++ G M E+ GR
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 18 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 75
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 76 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 134
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 135 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 184
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 37/212 (17%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDS----DHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
KGG K Y + E+ KV S H ++ +EI L + ++V G+
Sbjct: 36 KGGFAKCYE-ITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGF 94
Query: 402 -------------CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGL 448
CRR+ L L K + T P +F R + I+GV
Sbjct: 95 FEDDDFVYVVLEICRRRSLL----------ELHKRRKAVTEPEARYFMR-QTIQGVQ--- 140
Query: 449 LYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAP 508
YLH V+HRD+K N+ L+ D++ K+GDFGLA + + ++ GT Y+AP
Sbjct: 141 -YLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE-RKKDLCGTPNYIAP 195
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQ 540
E+L + D+++ G + + G+ P +
Sbjct: 196 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 18 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 75
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 76 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 134
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 135 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 184
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 41 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 98
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 157
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 158 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 207
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 17 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 133
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 134 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRW 183
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 129/306 (42%), Gaps = 54/306 (17%)
Query: 336 FSYKNLYKATKGGSGKVYRGVLPSS--------HAEIAVKKVCHD-SDHGMKQFVSEIVS 386
F KNL G G+ + V ++ + +AVK + + S ++ +SE
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 387 MGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR----------------- 429
+ ++ H ++++L G C + G LLL+ +Y GSL L + +
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 430 -----PSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGL 484
+L ++ G+ YL E ++HRD+ N+L+ + K+ DFGL
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAE---MSLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 485 AR-LYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLE-VACGRRP---V 539
+R +Y+ + + + V ++A E L + TT +DV++FGV + E V G P +
Sbjct: 197 SRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256
Query: 540 QPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQ 599
P L + + G ++ D E +Y +L L C PD RP
Sbjct: 257 PPERL------FNLLKTGHRMERPDNCSEEMY---------RLMLQCWKQEPDKRPVFAD 301
Query: 600 VVQYLD 605
+ + L+
Sbjct: 302 ISKDLE 307
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGMKQFVSEIVSMGKLRHRNLVQLRGYCR 403
KG V R V ++ E A K + S ++ E KL+H N+V+L +
Sbjct: 15 KGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 74
Query: 404 RKGELLLVYDYMPNGSL-----DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ LV+D + G L + YS S I+ + + Y H
Sbjct: 75 EESFHYLVFDLVTGGELFEDIVAREFYSEADAS-------HCIQQILESIAYCHS---NG 124
Query: 459 VLHRDIKPANVLLDADLEG---KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR 515
++HR++KP N+LL + +G KL DFGLA + H GT GYL+PE+L+
Sbjct: 125 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--GFAGTPGYLSPEVLKKDP 182
Query: 516 GTTSTDVYAFGVFMLEVACGRRP 538
+ D++A GV + + G P
Sbjct: 183 YSKPVDIWACGVILYILLVGYPP 205
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKLRHRNL 395
Y+NL G G V + +AVKK+ S K+ E+ + ++H N+
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 102
Query: 396 VQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGVAFGLL 449
+ L R E VY ++ L+ I+ + F ++I++G L
Sbjct: 103 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG----LK 158
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T Y APE
Sbjct: 159 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRWYRAPE 211
Query: 510 LLRNGRGTTST-DVYAFGVFMLEVACGR 536
++ N T D+++ G M E+ GR
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 85/193 (44%), Gaps = 18/193 (9%)
Query: 348 GSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGE 407
+G+ Y + IA +V H V+E + RH L L+ +
Sbjct: 28 ATGRYYAMKILRKEVIIAKDEVAHT--------VTESRVLQNTRHPFLTALKYAFQTHDR 79
Query: 408 LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKG-VAFGLLYLHEEWEQVVLHRDIKP 466
L V +Y G L + +R + +R R + L YLH + V++RDIK
Sbjct: 80 LCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKL 133
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAPELLRNGRGTTSTDVYAF 525
N++LD D K+ DFGL + + +D T GT YLAPE+L + + D +
Sbjct: 134 ENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGL 191
Query: 526 GVFMLEVACGRRP 538
GV M E+ CGR P
Sbjct: 192 GVVMYEMMCGRLP 204
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC--- 402
KG G+V+RG S E K+ D +E+ + LRH N++ G+
Sbjct: 47 KGRYGEVWRG---SWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENIL---GFIASD 100
Query: 403 ----RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEW--- 455
+L L+ Y GSL L T L+ RI+ +A GL +LH E
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT---LDTVSCLRIVLSIASGLAHLHIEIFGT 157
Query: 456 --EQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGN---DLHTTNVVGTVGYLAPEL 510
+ + HRD+K N+L+ + + + D GLA ++ D+ VGT Y+APE+
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 217
Query: 511 LRNG------RGTTSTDVYAFGVFMLEVACGRRPVQPG 542
L D++AFG+ + EVA RR V G
Sbjct: 218 LDETIQVDCFDSYKRVDIWAFGLVLWEVA--RRMVSNG 253
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRK 405
+G G+V V + A KK+ + +F EI M L H N+++L
Sbjct: 19 RGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDN 78
Query: 406 GELLLVYDYMPNGSL-DKILYSNT-RPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRD 463
++ LV + G L +++++ R S RI+K V + Y H + V HRD
Sbjct: 79 TDIYLVMELCTGGELFERVVHKRVFRES----DAARIMKDVLSAVAYCH---KLNVAHRD 131
Query: 464 IKPANVLL---DADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTST 520
+KP N L D KL DFGLA + G + T VGT Y++P++L G
Sbjct: 132 LKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK--VGTPYYVSPQVLEGLYG-PEC 188
Query: 521 DVYAFGVFMLEVACGRRP 538
D ++ GV M + CG P
Sbjct: 189 DEWSAGVMMYVLLCGYPP 206
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC--- 402
KG G+V+RG S E K+ D +E+ + LRH N++ G+
Sbjct: 18 KGRYGEVWRG---SWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENIL---GFIASD 71
Query: 403 ----RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEW--- 455
+L L+ Y GSL L T L+ RI+ +A GL +LH E
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT---LDTVSCLRIVLSIASGLAHLHIEIFGT 128
Query: 456 --EQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGN---DLHTTNVVGTVGYLAPEL 510
+ + HRD+K N+L+ + + + D GLA ++ D+ VGT Y+APE+
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 511 LRNG------RGTTSTDVYAFGVFMLEVACGRRPVQPG 542
L D++AFG+ + EVA RR V G
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEVA--RRMVSNG 224
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKLRHRNL 395
Y+NL G G V + +AVKK+ S K+ E+ + ++H N+
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 103
Query: 396 VQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGVAFGLL 449
+ L R E VY ++ L+ I+ + F ++I++G L
Sbjct: 104 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG----LK 159
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T Y APE
Sbjct: 160 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRWYRAPE 212
Query: 510 LLRNGRGTTST-DVYAFGVFMLEVACGR 536
++ N T D+++ G M E+ GR
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKLRHRNL 395
Y+NL G G V + +AVKK+ S K+ E+ + ++H N+
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 396 VQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGVAFGLL 449
+ L R E VY ++ L+ I+ + F ++I++G L
Sbjct: 90 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG----LK 145
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T Y APE
Sbjct: 146 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRWYRAPE 198
Query: 510 LLRNGRGTTST-DVYAFGVFMLEVACGR 536
++ N T D+++ G M E+ GR
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGMKQFVSEIVSMGKLRHRNLVQLRGYCR 403
KG V R V ++ E A K + S ++ E KL+H N+V+L +
Sbjct: 16 KGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 75
Query: 404 RKGELLLVYDYMPNGSL-----DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ LV+D + G L + YS S I+ + + Y H
Sbjct: 76 EESFHYLVFDLVTGGELFEDIVAREFYSEADAS-------HCIQQILESIAYCHS---NG 125
Query: 459 VLHRDIKPANVLLDADLEG---KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR 515
++HR++KP N+LL + +G KL DFGLA + H GT GYL+PE+L+
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--GFAGTPGYLSPEVLKKDP 183
Query: 516 GTTSTDVYAFGVFMLEVACGRRP 538
+ D++A GV + + G P
Sbjct: 184 YSKPVDIWACGVILYILLVGYPP 206
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 26 PER--YQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 142
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 143 ---LKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDD-EMTGYVATRW 192
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRK 405
+G G+V V + A KK+ + +F EI M L H N+++L
Sbjct: 36 RGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDN 95
Query: 406 GELLLVYDYMPNGSL-DKILYSNT-RPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRD 463
++ LV + G L +++++ R S RI+K V + Y H + V HRD
Sbjct: 96 TDIYLVMELCTGGELFERVVHKRVFRES----DAARIMKDVLSAVAYCH---KLNVAHRD 148
Query: 464 IKPANVLLDADLEG---KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTST 520
+KP N L D KL DFGLA + G + T VGT Y++P++L G
Sbjct: 149 LKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK--VGTPYYVSPQVLEGLYG-PEC 205
Query: 521 DVYAFGVFMLEVACGRRP 538
D ++ GV M + CG P
Sbjct: 206 DEWSAGVMMYVLLCGYPP 223
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKLRHRNL 395
Y+NL G G V + +AVKK+ S K+ E+ + ++H N+
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 396 VQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGVAFGLL 449
+ L R E VY ++ L+ I+ + F ++I++G L
Sbjct: 80 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG----LK 135
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T Y APE
Sbjct: 136 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRWYRAPE 188
Query: 510 LLRNGRGTTST-DVYAFGVFMLEVACGR 536
++ N T D+++ G M E+ GR
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGMKQFVSEIVSMGKLRHRNLVQLRGYCR 403
KG V R V ++ E A K + S ++ E KL+H N+V+L +
Sbjct: 39 KGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 98
Query: 404 RKGELLLVYDYMPNGSL-----DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ LV+D + G L + YS S I+ + + Y H
Sbjct: 99 EESFHYLVFDLVTGGELFEDIVAREFYSEADAS-------HCIQQILESIAYCHSNG--- 148
Query: 459 VLHRDIKPANVLLDADLEG---KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR 515
++HR++KP N+LL + +G KL DFGLA + H GT GYL+PE+L+
Sbjct: 149 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--GFAGTPGYLSPEVLKKDP 206
Query: 516 GTTSTDVYAFGVFMLEVACGRRP 538
+ D++A GV + + G P
Sbjct: 207 YSKPVDIWACGVILYILLVGYPP 229
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 85/193 (44%), Gaps = 18/193 (9%)
Query: 348 GSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGE 407
+G+ Y + IA +V H V+E + RH L L+ +
Sbjct: 28 ATGRYYAMKILRKEVIIAKDEVAHT--------VTESRVLQNTRHPFLTALKYAFQTHDR 79
Query: 408 LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKG-VAFGLLYLHEEWEQVVLHRDIKP 466
L V +Y G L + +R + +R R + L YLH + V++RDIK
Sbjct: 80 LCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKL 133
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAPELLRNGRGTTSTDVYAF 525
N++LD D K+ DFGL + + +D T GT YLAPE+L + + D +
Sbjct: 134 ENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGL 191
Query: 526 GVFMLEVACGRRP 538
GV M E+ CGR P
Sbjct: 192 GVVMYEMMCGRLP 204
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 11/168 (6%)
Query: 374 DHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLN 433
DH + + I + L+H N+V+L +G L++D + G L + + + R +
Sbjct: 53 DHQKLEREARICRL--LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVA--REYYS 108
Query: 434 WFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEG---KLGDFGLARLYDH 490
I+ + +L+ H+ V+HR++KP N+LL + L+G KL DFGLA +
Sbjct: 109 EADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVE 164
Query: 491 GNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
G GT GYL+PE+LR D++A GV + + G P
Sbjct: 165 GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC--- 402
KG G+V+RG S E K+ D +E+ + LRH N++ G+
Sbjct: 18 KGRYGEVWRG---SWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENIL---GFIASD 71
Query: 403 ----RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEW--- 455
+L L+ Y GSL L T L+ RI+ +A GL +LH E
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT---LDTVSCLRIVLSIASGLAHLHIEIFGT 128
Query: 456 --EQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGN---DLHTTNVVGTVGYLAPEL 510
+ + HRD+K N+L+ + + + D GLA ++ D+ VGT Y+APE+
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 511 LRNG------RGTTSTDVYAFGVFMLEVACGRRPVQPG 542
L D++AFG+ + EVA RR V G
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEVA--RRMVSNG 224
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 129/306 (42%), Gaps = 54/306 (17%)
Query: 336 FSYKNLYKATKGGSGKVYRGVLPSS--------HAEIAVKKVCHD-SDHGMKQFVSEIVS 386
F KNL G G+ + V ++ + +AVK + + S ++ +SE
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 387 MGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR----------------- 429
+ ++ H ++++L G C + G LLL+ +Y GSL L + +
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 430 -----PSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGL 484
+L ++ G+ YL E ++HRD+ N+L+ + K+ DFGL
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 485 AR-LYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLE-VACGRRP---V 539
+R +Y+ + + + V ++A E L + TT +DV++FGV + E V G P +
Sbjct: 197 SRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256
Query: 540 QPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQ 599
P L + + G ++ D E +Y +L L C PD RP
Sbjct: 257 PPERL------FNLLKTGHRMERPDNCSEEMY---------RLMLQCWKQEPDKRPVFAD 301
Query: 600 VVQYLD 605
+ + L+
Sbjct: 302 ISKDLE 307
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 85/193 (44%), Gaps = 18/193 (9%)
Query: 348 GSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGE 407
+G+ Y + IA +V H V+E + RH L L+ +
Sbjct: 28 ATGRYYAMKILRKEVIIAKDEVAHT--------VTESRVLQNTRHPFLTALKYAFQTHDR 79
Query: 408 LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKG-VAFGLLYLHEEWEQVVLHRDIKP 466
L V +Y G L + +R + +R R + L YLH + V++RDIK
Sbjct: 80 LCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKL 133
Query: 467 ANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAPELLRNGRGTTSTDVYAF 525
N++LD D K+ DFGL + + +D T GT YLAPE+L + + D +
Sbjct: 134 ENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGL 191
Query: 526 GVFMLEVACGRRP 538
GV M E+ CGR P
Sbjct: 192 GVVMYEMMCGRLP 204
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 335 RFS--YKNLYKATKGGSGKVYRGVLPSSHAEIAVK----KVCHDSDHGMKQFVSEIVSMG 388
RF+ Y+ + KG V R V + E A K K DH + + I +
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRL- 86
Query: 389 KLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGL 448
L+H N+V+L +G LV+D + G L + + + R + I + +
Sbjct: 87 -LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA--REYYSEADASHCIHQILESV 143
Query: 449 LYLHEEWEQVVLHRDIKPANVLLDADLEG---KLGDFGLARLYDHGNDLHTTNVVGTVGY 505
++H+ ++HRD+KP N+LL + +G KL DFGLA + G GT GY
Sbjct: 144 NHIHQ---HDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPGY 199
Query: 506 LAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
L+PE+LR D++A GV + + G P
Sbjct: 200 LSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 23 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 139
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 140 ---LKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDD-EMTGYVATRW 189
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 27 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 143
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T
Sbjct: 144 ---LKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDD-EMTGYVATRW 193
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 21 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ S + F ++I++G
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRG- 137
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGL R H +D T V T
Sbjct: 138 ---LKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCR---HTDD-EMTGYVATRW 187
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 16/223 (7%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC---HDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V +A+KK+ + H + + E+V M + H+N
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKN 89
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 90 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 149
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G T V T Y APE++
Sbjct: 150 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 204
Query: 514 GRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQK 556
+ D+++ G M E+ C + + PG D+ ID W K
Sbjct: 205 MGYKENVDLWSVGCIMGEMVC-HKILFPGR----DY-IDQWNK 241
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 37/212 (17%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDS----DHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
KGG K Y + E+ KV S H ++ +EI L + ++V G+
Sbjct: 52 KGGFAKCYE-ITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGF 110
Query: 402 -------------CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGL 448
CRR+ L L K + T P +F R + I+GV
Sbjct: 111 FEDDDFVYVVLEICRRRSLL----------ELHKRRKAVTEPEARYFMR-QTIQGVQ--- 156
Query: 449 LYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAP 508
YLH V+HRD+K N+ L+ D++ K+GDFGLA + + + GT Y+AP
Sbjct: 157 -YLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE-RKKXLCGTPNYIAP 211
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQ 540
E+L + D+++ G + + G+ P +
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 28 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 144
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H D T V T
Sbjct: 145 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTAD-EMTGYVATRW 194
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 16/223 (7%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC---HDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V +A+KK+ + H + + E+V M + H+N
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKN 78
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 79 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 138
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G T V T Y APE++
Sbjct: 139 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 193
Query: 514 GRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQK 556
+ D+++ G M E+ C + + PG D+ ID W K
Sbjct: 194 MGYKENVDLWSVGCIMGEMVC-HKILFPGR----DY-IDQWNK 230
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKLRHRNL 395
Y+NL G G V + +AVKK+ S K+ E+ + ++H N+
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 396 VQLRGY---CRRKGELLLVY--DYMPNGSLDKIL-YSNTRPSLNWFQRFRIIKGVAFGLL 449
+ L R E VY ++ L+ I+ + F ++I++G L
Sbjct: 80 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRG----LK 135
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T V T Y APE
Sbjct: 136 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGYVATRWYRAPE 188
Query: 510 LLRNGRGTTST-DVYAFGVFMLEVACGR 536
++ N T D+++ G M E+ GR
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 28 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 144
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H D T V T
Sbjct: 145 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTAD-EMTGYVATRW 194
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 28 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 144
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H D T V T
Sbjct: 145 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTAD-EMTGYVATRW 194
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 21 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 137
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ D+GLAR H +D T V T
Sbjct: 138 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLAR---HTDD-EMTGYVATRW 187
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 129/306 (42%), Gaps = 54/306 (17%)
Query: 336 FSYKNLYKATKGGSGKVYRGVLPSS--------HAEIAVKKVCHD-SDHGMKQFVSEIVS 386
F KNL G G+ + V ++ + +AVK + + S ++ +SE
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 387 MGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR----------------- 429
+ ++ H ++++L G C + G LLL+ +Y GSL L + +
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 430 -----PSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGL 484
+L ++ G+ YL E ++HRD+ N+L+ + K+ DFGL
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 485 AR-LYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLE-VACGRRP---V 539
+R +Y+ + + + V ++A E L + TT +DV++FGV + E V G P +
Sbjct: 197 SRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256
Query: 540 QPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQ 599
P L + + G ++ D E +Y +L L C PD RP
Sbjct: 257 PPERL------FNLLKTGHRMERPDNCSEEMY---------RLMLQCWKQEPDKRPVFAD 301
Query: 600 VVQYLD 605
+ + L+
Sbjct: 302 ISKDLE 307
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 120/276 (43%), Gaps = 25/276 (9%)
Query: 339 KNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHG-MKQFVSEI-VSMGKLRHRNLV 396
K+L + +G G V + V S +AVK++ D KQ + ++ V M +V
Sbjct: 25 KDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIV 84
Query: 397 QLRGYCRRKGELLLVYDYMPNGSLDKI---LYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
Q G R+G+ + + M + S DK +YS + +I L +L E
Sbjct: 85 QFYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE 143
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTTNVVGTVGYLAPELL- 511
+ ++HRDIKP+N+LLD KL DFG++ +L D + T G Y+APE +
Sbjct: 144 NLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS---IAKTRDAGCRPYMAPERID 198
Query: 512 ----RNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRL 567
R G S DV++ G+ + E+A GR P W + Q V+ P+L
Sbjct: 199 PSASRQGYDVRS-DVWSLGITLYELATGRFPYP-------KWNSVFDQLTQVVKGDPPQL 250
Query: 568 EGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQY 603
E + C + RP ++++++
Sbjct: 251 SNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 120/256 (46%), Gaps = 29/256 (11%)
Query: 364 IAVKKVCHDSDHG-MKQFVSEIVSMGKL-RHRNLVQLRGYCRRKG-ELLLVYDYMPNGSL 420
+AVK + + H + +SE+ + + H N+V L G C + G L+++ ++ G+L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 421 DKILYSNTR---PSLNWFQRFRIIK-------GVAFGLLYLHEEWEQVVLHRDIKPANVL 470
L S P + ++ F ++ VA G+ +L + +HRD+ N+L
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLAS---RKXIHRDLAARNIL 176
Query: 471 LDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFM 529
L K+ DFGLAR +Y + + + + ++APE + + T +DV++FGV +
Sbjct: 177 LSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 236
Query: 530 LEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGLFCSH 588
E+ + G P ++D + ++G + A D Y +M + L C H
Sbjct: 237 WEIFSLGASPYPGVKID--EEFXRRLKEGTRMRAPD------YTTPEMYQTM---LDCWH 285
Query: 589 SNPDTRPSMRQVVQYL 604
P RP+ ++V++L
Sbjct: 286 GEPSQRPTFSELVEHL 301
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 120/256 (46%), Gaps = 29/256 (11%)
Query: 364 IAVKKVCHDSDHG-MKQFVSEIVSMGKL-RHRNLVQLRGYCRRKG-ELLLVYDYMPNGSL 420
+AVK + + H + +SE+ + + H N+V L G C + G L+++ ++ G+L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 421 DKILYSNTR---PSLNWFQRFRIIK-------GVAFGLLYLHEEWEQVVLHRDIKPANVL 470
L S P + ++ F ++ VA G+ +L + +HRD+ N+L
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKXIHRDLAARNIL 176
Query: 471 LDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFM 529
L K+ DFGLAR +Y + + + + ++APE + + T +DV++FGV +
Sbjct: 177 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 236
Query: 530 LEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGLFCSH 588
E+ + G P ++D + ++G + A D Y +M + L C H
Sbjct: 237 WEIFSLGASPYPGVKID--EEFCRRLKEGTRMRAPD------YTTPEMYQTM---LDCWH 285
Query: 589 SNPDTRPSMRQVVQYL 604
P RP+ ++V++L
Sbjct: 286 GEPSQRPTFSELVEHL 301
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 21 PER--YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 137
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D V T
Sbjct: 138 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMAGFVATRW 187
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 341 LYKATKGGSGKVYRGVLPS-SHAEIAVKKVCHDSD-----HGMKQFVSEIVSMGKLRHRN 394
L K G G V RG + S ++V C D M F+ E+ +M L HRN
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
L++L G + +V + P GSL D++ L R+ + VA G+ YL
Sbjct: 77 LIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES 133
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTV--GYLAPELL 511
+ +HRD+ N+LL K+GDFGL R +D + V + APE L
Sbjct: 134 ---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 512 RNGRGTTSTDVYAFGVFMLEV 532
+ + ++D + FGV + E+
Sbjct: 191 KTRTFSHASDTWMFGVTLWEM 211
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 21 PER--YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 137
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D V T
Sbjct: 138 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMAGFVATRW 187
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 343 KATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGM--KQFVSEIVSMGKLRHRNLVQLRG 400
K + G+GK Y A+ K+ S G+ ++ E+ + ++RH N++ L
Sbjct: 30 KCRQKGTGKEY-------AAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHD 82
Query: 401 YCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVL 460
K +++L+ + + G L L + SL + + +K + G+ YLH + +
Sbjct: 83 IFENKTDVVLILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLH---SKRIA 137
Query: 461 HRDIKPANV-LLDADLEG---KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRG 516
H D+KP N+ LLD ++ KL DFG+A + GN+ N+ GT ++APE++
Sbjct: 138 HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFGTPEFVAPEIVNYEPL 195
Query: 517 TTSTDVYAFGVFMLEVACGRRP 538
D+++ GV + G P
Sbjct: 196 GLEADMWSIGVITYILLSGASP 217
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 44 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 101
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 102 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 160
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D V T
Sbjct: 161 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMXGYVATRW 210
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 391 RHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKG-VAFGLL 449
RH L L+ + L V +Y G L + +R + R R + L
Sbjct: 206 RHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVSALD 262
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARL-YDHGNDLHTTNVVGTVGYLAP 508
YLH E + V++RD+K N++LD D K+ DFGL + G + T GT YLAP
Sbjct: 263 YLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAP 318
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
E+L + + D + GV M E+ CGR P
Sbjct: 319 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 391 RHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKG-VAFGLL 449
RH L L+ + L V +Y G L + +R + R R + L
Sbjct: 209 RHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVSALD 265
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARL-YDHGNDLHTTNVVGTVGYLAP 508
YLH E + V++RD+K N++LD D K+ DFGL + G + T GT YLAP
Sbjct: 266 YLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAP 321
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
E+L + + D + GV M E+ CGR P
Sbjct: 322 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 11/175 (6%)
Query: 367 KKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYS 426
K+ C + + ++ E+ M L H LV L + + ++ +V D + G L L
Sbjct: 50 KQKCVERNE-VRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQ 108
Query: 427 NTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR 486
N + F I + L YL Q ++HRD+KP N+LLD + DF +A
Sbjct: 109 NVHFKEETVKLF--ICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAA 163
Query: 487 LYDHGNDLHTTNVVGTVGYLAPELLRNGRG---TTSTDVYAFGVFMLEVACGRRP 538
+ + T + GT Y+APE+ + +G + + D ++ GV E+ GRRP
Sbjct: 164 ML--PRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 10/202 (4%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC---HDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V +A+KK+ + H + + E+V M + H+N
Sbjct: 26 YQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKN 84
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHS 144
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G T V T Y APE++
Sbjct: 145 AG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 514 GRGTTSTDVYAFGVFMLEVACG 535
+ D+++ GV M E+ G
Sbjct: 200 MGYKENVDIWSVGVIMGEMIKG 221
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 20/208 (9%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKLRHRNL 395
Y+NL G G V + +AVKK+ S K+ E+ + ++H N+
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 396 VQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGVAFGLL 449
+ L R E VY ++ L+ I+ + F ++I++G L
Sbjct: 80 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG----LK 135
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D V T Y APE
Sbjct: 136 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMAGFVATRWYRAPE 188
Query: 510 LLRNGRGTTST-DVYAFGVFMLEVACGR 536
++ N T D+++ G M E+ GR
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 341 LYKATKGGSGKVYRGVLPS-SHAEIAVKKVCHDSD-----HGMKQFVSEIVSMGKLRHRN 394
L K G G V RG + S ++V C D M F+ E+ +M L HRN
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
L++L G + +V + P GSL D++ L R+ + VA G+ YL
Sbjct: 83 LIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES 139
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTV--GYLAPELL 511
+ +HRD+ N+LL K+GDFGL R +D + V + APE L
Sbjct: 140 ---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 196
Query: 512 RNGRGTTSTDVYAFGVFMLEV 532
+ + ++D + FGV + E+
Sbjct: 197 KTRTFSHASDTWMFGVTLWEM 217
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 20/208 (9%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKLRHRNL 395
Y+NL G G V + +AVKK+ S K+ E+ + ++H N+
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 103
Query: 396 VQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGVAFGLL 449
+ L R E VY ++ L+ I+ + F ++I++G L
Sbjct: 104 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG----LK 159
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D V T Y APE
Sbjct: 160 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMXGXVATRWYRAPE 212
Query: 510 LLRNGRGTTST-DVYAFGVFMLEVACGR 536
++ N T D+++ G M E+ GR
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 341 LYKATKGGSGKVYRGVLPS-SHAEIAVKKVCHDSD-----HGMKQFVSEIVSMGKLRHRN 394
L K G G V RG + S ++V C D M F+ E+ +M L HRN
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
L++L G + +V + P GSL D++ L R+ + VA G+ YL
Sbjct: 73 LIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES 129
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTV--GYLAPELL 511
+ +HRD+ N+LL K+GDFGL R +D + V + APE L
Sbjct: 130 ---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 512 RNGRGTTSTDVYAFGVFMLEV 532
+ + ++D + FGV + E+
Sbjct: 187 KTRTFSHASDTWMFGVTLWEM 207
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 343 KATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGM--KQFVSEIVSMGKLRHRNLVQLRG 400
K + G+GK Y A+ K+ S G+ ++ E+ + ++RH N++ L
Sbjct: 23 KCRQKGTGKEY-------AAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHD 75
Query: 401 YCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVL 460
K +++L+ + + G L L + SL + + +K + G+ YLH + +
Sbjct: 76 IFENKTDVVLILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLH---SKRIA 130
Query: 461 HRDIKPANV-LLDADLEG---KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRG 516
H D+KP N+ LLD ++ KL DFG+A + GN+ N+ GT ++APE++
Sbjct: 131 HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFGTPEFVAPEIVNYEPL 188
Query: 517 TTSTDVYAFGVFMLEVACGRRP 538
D+++ GV + G P
Sbjct: 189 GLEADMWSIGVITYILLSGASP 210
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 11/94 (11%)
Query: 459 VLHRDIKPANVLLDADLEGKLGDFGLARLYDH---------GNDLHTTNVVGTVGYLAPE 509
V+HRD+KP+N+L++++ + K+ DFGLAR+ D G T V T Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
Query: 510 -LLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPG 542
+L + + + + DV++ G + E+ RRP+ PG
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPG 225
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 440 IIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNV 499
+I + GL Y+H ++HRD+KP+N+ ++ D E K+ DFGLAR H +D T
Sbjct: 159 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD-EMTGY 211
Query: 500 VGTVGYLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
V T Y APE++ N T D+++ G M E+ GR
Sbjct: 212 VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 341 LYKATKGGSGKVYRGVLPS-SHAEIAVKKVCHDSD-----HGMKQFVSEIVSMGKLRHRN 394
L K G G V RG + S ++V C D M F+ E+ +M L HRN
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
L++L G + +V + P GSL D++ L R+ + VA G+ YL
Sbjct: 73 LIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES 129
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTV--GYLAPELL 511
+ +HRD+ N+LL K+GDFGL R +D + V + APE L
Sbjct: 130 ---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 512 RNGRGTTSTDVYAFGVFMLEV 532
+ + ++D + FGV + E+
Sbjct: 187 KTRTFSHASDTWMFGVTLWEM 207
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 341 LYKATKGGSGKVYRGVLPS-SHAEIAVKKVCHDSD-----HGMKQFVSEIVSMGKLRHRN 394
L K G G V RG + S ++V C D M F+ E+ +M L HRN
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
L++L G + +V + P GSL D++ L R+ + VA G+ YL
Sbjct: 77 LIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES 133
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTV--GYLAPELL 511
+ +HRD+ N+LL K+GDFGL R +D + V + APE L
Sbjct: 134 ---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 512 RNGRGTTSTDVYAFGVFMLEV 532
+ + ++D + FGV + E+
Sbjct: 191 KTRTFSHASDTWMFGVTLWEM 211
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 343 KATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGM--KQFVSEIVSMGKLRHRNLVQLRG 400
K + G+GK Y A+ K+ S G+ ++ E+ + ++RH N++ L
Sbjct: 44 KCRQKGTGKEY-------AAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHD 96
Query: 401 YCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVL 460
K +++L+ + + G L L + SL + + +K + G+ YLH + +
Sbjct: 97 IFENKTDVVLILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLH---SKRIA 151
Query: 461 HRDIKPANV-LLDADLEG---KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRG 516
H D+KP N+ LLD ++ KL DFG+A + GN+ N+ GT ++APE++
Sbjct: 152 HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFGTPEFVAPEIVNYEPL 209
Query: 517 TTSTDVYAFGVFMLEVACGRRP 538
D+++ GV + G P
Sbjct: 210 GLEADMWSIGVITYILLSGASP 231
>pdb|3USU|A Chain A, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|C Chain C, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|E Chain E, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|G Chain G, Crystal Structure Of Butea Monosperma Seed Lectin
Length = 256
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 22/165 (13%)
Query: 102 GHGMAFFISPSTDFSEAVAGSHLGIFNRSN-NGQFTNHIFAIELDTVQSPEFNDIDGNHV 160
G+AFF++P + +A AG LG+F+ + N + A+E DT ++ F D H+
Sbjct: 88 ADGLAFFLAPVSSPPKAGAG-FLGLFDSAVFNSSY--QTVAVEFDTYENTVFLDPPDTHI 144
Query: 161 GIDVNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWIDYNGQEKLVNVTLAPVPNPK 220
GIDVN ++S ++ L +G+ ++ I Y+ KL+ L P+ K
Sbjct: 145 GIDVNSIKSIKTVKWD-------------LANGEAAKVLITYDSSAKLLVAALV-YPSSK 190
Query: 221 PSRPLLSTSIDLSQILQDSMYVGLSAATGTR---VSDYYILGWSF 262
S +LS +DL +L + + +G SAATG + + + WSF
Sbjct: 191 TSF-ILSDVVDLKSVLPEWVSIGFSAATGASSGYIETHDVFSWSF 234
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 11/94 (11%)
Query: 459 VLHRDIKPANVLLDADLEGKLGDFGLARLYDH---------GNDLHTTNVVGTVGYLAPE 509
V+HRD+KP+N+L++++ + K+ DFGLAR+ D G T V T Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
Query: 510 -LLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPG 542
+L + + + + DV++ G + E+ RRP+ PG
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPG 225
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 124/300 (41%), Gaps = 51/300 (17%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQ-FVSEIVSMGKL-RHRN 394
++ + +AT G GK + ++AVK + + K+ +SE+ M L +H N
Sbjct: 43 AFGKVVEATAFGLGK------EDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 96
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR----PSLNWFQR------------- 437
+V L G C G +L++ +Y G L L PSL Q
Sbjct: 97 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLE 156
Query: 438 ----FRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGN 492
VA G+ +L + +HRD+ NVLL K+GDFGLAR + + N
Sbjct: 157 LRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 213
Query: 493 DLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGEL---DLLD 548
+ N V ++APE + + T +DV+++G+ + E+ + G P PG L
Sbjct: 214 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY-PGILVNSKFYK 272
Query: 549 WVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYLDGGA 608
V D +Q A P+ IY Q C P RP+ +Q+ +L A
Sbjct: 273 LVKDGYQMAQ--PAFAPK--NIYSIMQA---------CWALEPTHRPTFQQICSFLQEQA 319
>pdb|3USU|B Chain B, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|D Chain D, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|F Chain F, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|H Chain H, Crystal Structure Of Butea Monosperma Seed Lectin
Length = 242
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 22/165 (13%)
Query: 102 GHGMAFFISPSTDFSEAVAGSHLGIFNRSN-NGQFTNHIFAIELDTVQSPEFNDIDGNHV 160
G+AFF++P + +A AG LG+F+ + N + A+E DT ++ F D H+
Sbjct: 88 ADGLAFFLAPVSSPPKAGAG-FLGLFDSAVFNSSY--QTVAVEFDTYENTVFLDPPDTHI 144
Query: 161 GIDVNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWIDYNGQEKLVNVTLAPVPNPK 220
GIDVN ++S ++ L +G+ ++ I Y+ KL+ L P+ K
Sbjct: 145 GIDVNSIKSIKTVKWD-------------LANGEAAKVLITYDSSAKLLVAALV-YPSSK 190
Query: 221 PSRPLLSTSIDLSQILQDSMYVGLSAATGTR---VSDYYILGWSF 262
S +LS +DL +L + + +G SAATG + + + WSF
Sbjct: 191 TSF-ILSDVVDLKSVLPEWVSIGFSAATGASSGYIETHDVFSWSF 234
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 10/202 (4%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC---HDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V +A+KK+ + H + + E+V M + H+N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKN 84
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHS 144
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G T V T Y APE++
Sbjct: 145 AG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 514 GRGTTSTDVYAFGVFMLEVACG 535
+ D+++ GV M E+ G
Sbjct: 200 MGYKENVDIWSVGVIMGEMIKG 221
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 109/265 (41%), Gaps = 49/265 (18%)
Query: 350 GKVYRGVL----PSSHAEIAVKKVCHDSDHG--MKQFVSEIVSMGKLRHRNLVQLRGYCR 403
GKVY+G L P + K D G ++F E + +L+H N+V L G
Sbjct: 40 GKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT 99
Query: 404 RKGELLLVYDYMPNGSLDKILYSNT--------------RPSLNWFQRFRIIKGVAFGLL 449
+ L +++ Y +G L + L + + +L ++ +A G+
Sbjct: 100 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGME 159
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAP 508
YL V+H+D+ NVL+ L K+ D GL R +Y N + + ++AP
Sbjct: 160 YLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAP 216
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEV-------ACG-----------RRPVQPGELDLLDWV 550
E + G+ + +D++++GV + EV CG R V P D WV
Sbjct: 217 EAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWV 276
Query: 551 ----IDYWQKGDVLDASDPRLEGIY 571
I+ W + + PR + I+
Sbjct: 277 YALMIECWNE---FPSRRPRFKDIH 298
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 350 GKVYRGVL----PSSHAEIAVKKVCHDSDHG--MKQFVSEIVSMGKLRHRNLVQLRGYCR 403
GKVY+G L P + K D G ++F E + +L+H N+V L G
Sbjct: 23 GKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT 82
Query: 404 RKGELLLVYDYMPNGSLDKILYSNT--------------RPSLNWFQRFRIIKGVAFGLL 449
+ L +++ Y +G L + L + + +L ++ +A G+
Sbjct: 83 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGME 142
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAP 508
YL V+H+D+ NVL+ L K+ D GL R +Y N + + ++AP
Sbjct: 143 YLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAP 199
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEV 532
E + G+ + +D++++GV + EV
Sbjct: 200 EAIMYGKFSIDSDIWSYGVVLWEV 223
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 16/223 (7%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC---HDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V +A+KK+ + H + + E+V M + H+N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKN 84
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G V T Y APE++
Sbjct: 145 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVVTRYYRAPEVILG 199
Query: 514 GRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQK 556
+ D+++ G M E+ C + + PG D+ ID W K
Sbjct: 200 MGYKENVDIWSVGCIMGEMVC-HKILFPGR----DY-IDQWNK 236
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 341 LYKATKGGSGKVYRGVLPS-SHAEIAVKKVCHDSD-----HGMKQFVSEIVSMGKLRHRN 394
L K G G V RG + S ++V C D M F+ E+ +M L HRN
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
L++L G + +V + P GSL D++ L R+ + VA G+ YL
Sbjct: 83 LIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES 139
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTV--GYLAPELL 511
+ +HRD+ N+LL K+GDFGL R +D V + APE L
Sbjct: 140 ---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 196
Query: 512 RNGRGTTSTDVYAFGVFMLEV 532
+ + ++D + FGV + E+
Sbjct: 197 KTRTFSHASDTWMFGVTLWEM 217
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 391 RHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKG-VAFGLL 449
RH L L+ + L V +Y G L + +R + R R + L
Sbjct: 68 RHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVSALD 124
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAP 508
YLH E + V++RD+K N++LD D K+ DFGL + + D T GT YLAP
Sbjct: 125 YLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAP 180
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
E+L + + D + GV M E+ CGR P
Sbjct: 181 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 391 RHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKG-VAFGLL 449
RH L L+ + L V +Y G L + +R + R R + L
Sbjct: 66 RHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVSALD 122
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAP 508
YLH E + V++RD+K N++LD D K+ DFGL + + D T GT YLAP
Sbjct: 123 YLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAP 178
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
E+L + + D + GV M E+ CGR P
Sbjct: 179 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 21 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 137
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ FGLAR H +D T V T
Sbjct: 138 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLAR---HTDD-EMTGYVATRW 187
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 25/202 (12%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY----- 401
GG G+V++ +K+V ++++ + E+ ++ KL H N+V G
Sbjct: 22 GGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIVHYNGCWDGFD 77
Query: 402 ----------CRRKGELLLV-YDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLY 450
R K + L + ++ G+L++ + L+ + + + G+ Y
Sbjct: 78 YDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDY 137
Query: 451 LHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPEL 510
+H + +++RD+KP+N+ L + K+GDFGL + ND GT+ Y++PE
Sbjct: 138 IHS---KKLINRDLKPSNIFLVDTKQVKIGDFGL--VTSLKNDGKRXRSKGTLRYMSPEQ 192
Query: 511 LRNGRGTTSTDVYAFGVFMLEV 532
+ + D+YA G+ + E+
Sbjct: 193 ISSQDYGKEVDLYALGLILAEL 214
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 391 RHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKG-VAFGLL 449
RH L L+ + L V +Y G L + +R + R R + L
Sbjct: 67 RHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVSALD 123
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN-VVGTVGYLAP 508
YLH E + V++RD+K N++LD D K+ DFGL + + D T GT YLAP
Sbjct: 124 YLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAP 179
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
E+L + + D + GV M E+ CGR P
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 16/223 (7%)
Query: 338 YKNLYKATKGGSGKV---YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V Y VL + A + + + H + + E+V M + H+N
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKN 122
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 123 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 182
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G T V T Y APE++
Sbjct: 183 AG---IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILG 237
Query: 514 GRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQK 556
+ D+++ G M E+ + + PG D+ ID W K
Sbjct: 238 MGYKENVDIWSVGCIMGEMV-RHKILFPGR----DY-IDQWNK 274
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 341 LYKATKGGSGKVYRGVLPS-SHAEIAVKKVCHDSD-----HGMKQFVSEIVSMGKLRHRN 394
L K G G V RG + S ++V C D M F+ E+ +M L HRN
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
L++L G + +V + P GSL D++ L R+ + VA G+ YL
Sbjct: 73 LIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES 129
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTV--GYLAPELL 511
+ +HRD+ N+LL K+GDFGL R +D V + APE L
Sbjct: 130 ---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 186
Query: 512 RNGRGTTSTDVYAFGVFMLEV 532
+ + ++D + FGV + E+
Sbjct: 187 KTRTFSHASDTWMFGVTLWEM 207
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 21 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 137
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ D GLAR H +D T V T
Sbjct: 138 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLAR---HTDD-EMTGYVATRW 187
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 114/269 (42%), Gaps = 37/269 (13%)
Query: 338 YKNLYKATKGGSGKV---YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V Y VL + A + + + H + + E+V M + H+N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKN 84
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHS 144
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G T V T Y APE++
Sbjct: 145 AG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 514 GRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVE 573
+ D+++ G M E+ + + PG D+ ID W K
Sbjct: 200 MGYKENVDIWSVGCIMGEMV-RHKILFPGR----DY-IDQWNK----------------- 236
Query: 574 EQMEIVLKLGLFCSHSNPDTRPSMRQVVQ 602
++ +LG C +P++R V+
Sbjct: 237 ----VIEQLGTPCPEFMKKLQPTVRNYVE 261
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 118/273 (43%), Gaps = 42/273 (15%)
Query: 346 KGGSGKVYRGVLPS---SHAEIAVKKVCHD--SDHGMKQFVSEIVSMGKLRHRNLVQLRG 400
KG G V L S ++AVK + D + +++F+ E M + H ++ +L G
Sbjct: 33 KGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVG 92
Query: 401 YC---RRKGEL---LLVYDYMPNGSLDKILYSNTRPSLNWFQR-----FRIIKGVAFGLL 449
R KG L +++ +M +G L L + +R N F R + +A G+
Sbjct: 93 VSLRSRAKGRLPIPMVILPFMKHGDLHAFLLA-SRIGENPFNLPLQTLVRFMVDIACGME 151
Query: 450 YLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLA 507
YL + +HRD+ N +L D+ + DFGL+R G D + V +LA
Sbjct: 152 YLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSG-DYYRQGCASKLPVKWLA 207
Query: 508 PELLRNGRGTTSTDVYAFGVFMLEVAC-GRRP---VQPGELDLLDWVIDYWQKGDVLDAS 563
E L + T +DV+AFGV M E+ G+ P ++ E + +Y G+ L
Sbjct: 208 LESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE------IYNYLIGGNRLKQP 261
Query: 564 DPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPS 596
E ME V L C ++P RPS
Sbjct: 262 ---------PECMEEVYDLMYQCWSADPKQRPS 285
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 16/223 (7%)
Query: 338 YKNLYKATKGGSGKV---YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V Y VL + A + + + H + + E+V M + H+N
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKN 122
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 123 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 182
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G T V T Y APE++
Sbjct: 183 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 237
Query: 514 GRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQK 556
+ D+++ G M E+ + + PG D+ ID W K
Sbjct: 238 MGYKENVDIWSVGCIMGEMV-RHKILFPGR----DY-IDQWNK 274
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 65/141 (46%), Gaps = 10/141 (7%)
Query: 408 LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPA 467
L +V +YMP G L ++ SN W RF + V L +H +HRD+KP
Sbjct: 149 LYMVMEYMPGGDLVNLM-SNYDVPEKW-ARFYTAE-VVLALDAIHS---MGFIHRDVKPD 202
Query: 468 NVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGT----TSTDVY 523
N+LLD KL DFG + + VGT Y++PE+L++ G D +
Sbjct: 203 NMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWW 262
Query: 524 AFGVFMLEVACGRRPVQPGEL 544
+ GVF+ E+ G P L
Sbjct: 263 SVGVFLYEMLVGDTPFYADSL 283
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 347 GGSGKVYRGV--LPSSHAEIAVKKVCHDSDHG-MKQFVSEIVSMGKLRHRNLVQLRGYCR 403
G G V +GV + ++A+K + ++ ++ + E M +L + +V+L G C+
Sbjct: 21 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ 80
Query: 404 RKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRD 463
+ L+LV + G L K L R + ++ V+ G+ YL E + +HRD
Sbjct: 81 AEA-LMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEE---KNFVHRD 135
Query: 464 IKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTD 521
+ NVLL K+ DFGL++ + +T G + + APE + + ++ +D
Sbjct: 136 LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSD 195
Query: 522 VYAFGVFMLE-VACGRRPVQ 540
V+++GV M E ++ G++P +
Sbjct: 196 VWSYGVTMWEALSYGQKPYK 215
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 21 PER--YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 137
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ DF LAR H +D T V T
Sbjct: 138 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLAR---HTDD-EMTGYVATRW 187
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 65/141 (46%), Gaps = 10/141 (7%)
Query: 408 LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPA 467
L +V +YMP G L ++ SN W RF + V L +H +HRD+KP
Sbjct: 144 LYMVMEYMPGGDLVNLM-SNYDVPEKW-ARFYTAE-VVLALDAIHS---MGFIHRDVKPD 197
Query: 468 NVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGT----TSTDVY 523
N+LLD KL DFG + + VGT Y++PE+L++ G D +
Sbjct: 198 NMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWW 257
Query: 524 AFGVFMLEVACGRRPVQPGEL 544
+ GVF+ E+ G P L
Sbjct: 258 SVGVFLYEMLVGDTPFYADSL 278
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 16/223 (7%)
Query: 338 YKNLYKATKGGSGKV---YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V Y VL + A + + + H + + E+V M + H+N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKN 84
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G T V T Y APE++
Sbjct: 145 AG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 514 GRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQK 556
+ D+++ G M E+ + + PG D+ ID W K
Sbjct: 200 MGYKENVDIWSVGCIMGEMV-RHKILFPGR----DY-IDQWNK 236
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 65/141 (46%), Gaps = 10/141 (7%)
Query: 408 LLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPA 467
L +V +YMP G L ++ SN W RF + V L +H +HRD+KP
Sbjct: 149 LYMVMEYMPGGDLVNLM-SNYDVPEKW-ARFYTAE-VVLALDAIHS---MGFIHRDVKPD 202
Query: 468 NVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGT----TSTDVY 523
N+LLD KL DFG + + VGT Y++PE+L++ G D +
Sbjct: 203 NMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWW 262
Query: 524 AFGVFMLEVACGRRPVQPGEL 544
+ GVF+ E+ G P L
Sbjct: 263 SVGVFLYEMLVGDTPFYADSL 283
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 21 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 137
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ D GLAR H +D T V T
Sbjct: 138 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLAR---HTDD-EMTGYVATRW 187
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 16/223 (7%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC---HDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V +A+KK+ + H + + E+V M + H+N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKN 84
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G V T Y APE++
Sbjct: 145 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVVTRYYRAPEVILG 199
Query: 514 GRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQK 556
+ D+++ G M E+ C + + PG D+ ID W K
Sbjct: 200 MGYKENVDLWSVGCIMGEMVC-HKILFPGR----DY-IDQWNK 236
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 16/223 (7%)
Query: 338 YKNLYKATKGGSGKV---YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V Y VL + A + + + H + + E+V M + H+N
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKN 78
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 79 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 138
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G T V T Y APE++
Sbjct: 139 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 193
Query: 514 GRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQK 556
+ D+++ G M E+ + + PG D+ ID W K
Sbjct: 194 MGYKENVDIWSVGCIMGEMV-RHKILFPGR----DY-IDQWNK 230
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 16/223 (7%)
Query: 338 YKNLYKATKGGSGKV---YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V Y VL + A + + + H + + E+V M + H+N
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKN 85
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 86 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 145
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G T V T Y APE++
Sbjct: 146 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 200
Query: 514 GRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQK 556
+ D+++ G M E+ + + PG D+ ID W K
Sbjct: 201 MGYKENVDIWSVGCIMGEMV-RHKILFPGR----DY-IDQWNK 237
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 16/223 (7%)
Query: 338 YKNLYKATKGGSGKV---YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V Y VL + A + + + H + + E+V M + H+N
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKN 83
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 84 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 143
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G T V T Y APE++
Sbjct: 144 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 198
Query: 514 GRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQK 556
+ D+++ G M E+ + + PG D+ ID W K
Sbjct: 199 MGYKENVDIWSVGCIMGEMV-RHKILFPGR----DY-IDQWNK 235
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 16/223 (7%)
Query: 338 YKNLYKATKGGSGKV---YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V Y VL + A + + + H + + E+V M + H+N
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKN 78
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 79 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 138
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G T V T Y APE++
Sbjct: 139 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 193
Query: 514 GRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQK 556
+ D+++ G M E+ + + PG D+ ID W K
Sbjct: 194 MGYKENVDIWSVGCIMGEMV-RHKILFPGR----DY-IDQWNK 230
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 16/223 (7%)
Query: 338 YKNLYKATKGGSGKV---YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V Y VL + A + + + H + + E+V M + H+N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKN 84
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G T V T Y APE++
Sbjct: 145 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 514 GRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQK 556
+ D+++ G M E+ + + PG D+ ID W K
Sbjct: 200 MGYKENVDIWSVGCIMGEMV-RHKILFPGR----DY-IDQWNK 236
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 16/223 (7%)
Query: 338 YKNLYKATKGGSGKV---YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V Y VL + A + + + H + + E+V M + H+N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKN 84
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G T V T Y APE++
Sbjct: 145 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 514 GRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQK 556
+ D+++ G M E+ + + PG D+ ID W K
Sbjct: 200 MGYKENVDIWSVGCIMGEMV-RHKILFPGR----DY-IDQWNK 236
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 16/223 (7%)
Query: 338 YKNLYKATKGGSGKV---YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V Y VL + A + + + H + + E+V M + H+N
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKN 77
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 78 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 137
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G T V T Y APE++
Sbjct: 138 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 192
Query: 514 GRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQK 556
+ D+++ G M E+ + + PG D+ ID W K
Sbjct: 193 MGYKENVDIWSVGCIMGEMV-RHKILFPGR----DY-IDQWNK 229
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 16/223 (7%)
Query: 338 YKNLYKATKGGSGKV---YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V Y VL + A + + + H + + E+V M + H+N
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKN 85
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 86 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 145
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G T V T Y APE++
Sbjct: 146 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 200
Query: 514 GRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQK 556
+ D+++ G M E+ + + PG D+ ID W K
Sbjct: 201 MGYKENVDIWSVGCIMGEMV-RHKILFPGR----DY-IDQWNK 237
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 16/223 (7%)
Query: 338 YKNLYKATKGGSGKV---YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V Y VL + A + + + H + + E+V M + H+N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKN 84
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G T V T Y APE++
Sbjct: 145 AG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 514 GRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQK 556
+ D+++ G M E+ + + PG D+ ID W K
Sbjct: 200 MGYKENVDIWSVGCIMGEMV-RHKILFPGR----DY-IDQWNK 236
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 6/104 (5%)
Query: 431 SLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDH 490
SL Q + ++ L +LH Q ++H D+KPAN+ L KLGDFGL L +
Sbjct: 153 SLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGL--LVEL 207
Query: 491 GNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVAC 534
G G Y+APELL+ G T+ DV++ G+ +LEVAC
Sbjct: 208 GTAGAGEVQEGDPRYMAPELLQGSYG-TAADVFSLGLTILEVAC 250
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 16/223 (7%)
Query: 338 YKNLYKATKGGSGKV---YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V Y VL + A + + + H + + E+V M + H+N
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKN 77
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 78 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHS 137
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G T V T Y APE++
Sbjct: 138 AG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 192
Query: 514 GRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQK 556
+ D+++ G M E+ + + PG D+ ID W K
Sbjct: 193 MGYKENVDIWSVGCIMGEMV-RHKILFPGR----DY-IDQWNK 229
>pdb|2BQP|A Chain A, The Structure Of The Pea Lectin-D-Glucopyranose Complex
pdb|2BQP|B Chain B, The Structure Of The Pea Lectin-D-Glucopyranose Complex
Length = 234
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 21/164 (12%)
Query: 104 GMAFFISPSTDFSEAVAGSHLGIFNRSNNGQFTNHIFAIELDTVQSPEFNDIDGN-HVGI 162
G FFI+P D G +LG+FN + + T A+E DT + ++ + + H+GI
Sbjct: 82 GFTFFIAP-VDTKPQTGGGYLGVFNSAEYDK-TTQTVAVEFDTFYNAAWDPSNRDRHIGI 139
Query: 163 DVNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWIDYNGQEKLVNVTLAPVPNPKPS 222
DVN ++S + S + L++G+ + I +N ++ V+L PN
Sbjct: 140 DVNSIKSVNTKSWK-------------LQNGEEANVVIAFNAATNVLTVSLT-YPNNSLE 185
Query: 223 RPL----LSTSIDLSQILQDSMYVGLSAATGTRVSDYYILGWSF 262
+ LS + L ++ + + +G SA TG + + +L WSF
Sbjct: 186 EEVTSYTLSDVVSLKDVVPEWVRIGFSATTGAEYAAHEVLSWSF 229
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 16/223 (7%)
Query: 338 YKNLYKATKGGSGKV---YRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V Y VL + A + + + H + + E+V M + H+N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKN 84
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHS 144
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G T V T Y APE++
Sbjct: 145 AG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 514 GRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQK 556
+ D+++ G M E+ + + PG D+ ID W K
Sbjct: 200 MGYKENVDIWSVGCIMGEMV-RHKILFPGR----DY-IDQWNK 236
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCH--DSDHGMKQFVSEIVSMGKL 390
P R Y+NL G G V + +AVKK+ S K+ E+ + +
Sbjct: 21 PER--YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 391 RHRNLVQLRGY---CRRKGELLLVY--DYMPNGSLDKILYSNTRPSLN-WFQRFRIIKGV 444
+H N++ L R E VY ++ L+ I+ + F ++I++G
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG- 137
Query: 445 AFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVG 504
L Y+H ++HRD+KP+N+ ++ D E K+ D GLAR H +D T V T
Sbjct: 138 ---LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLAR---HTDD-EMTGYVATRW 187
Query: 505 YLAPELLRNGRGTTST-DVYAFGVFMLEVACGR 536
Y APE++ N T D+++ G M E+ GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 11/94 (11%)
Query: 459 VLHRDIKPANVLLDADLEGKLGDFGLARLYDH---------GNDLHTTNVVGTVGYLAPE 509
V+HRD+KP+N+L++++ + K+ DFGLAR+ D G V T Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 510 -LLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPG 542
+L + + + + DV++ G + E+ RRP+ PG
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPG 225
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 94/215 (43%), Gaps = 38/215 (17%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGY----- 401
GG G+V++ +++V ++++ + E+ ++ KL H N+V G
Sbjct: 23 GGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVKALAKLDHVNIVHYNGCWDGFD 78
Query: 402 -----------------------CRRKGELLLV-YDYMPNGSLDKILYSNTRPSLNWFQR 437
R K + L + ++ G+L++ + L+
Sbjct: 79 YDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA 138
Query: 438 FRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTT 497
+ + + G+ Y+H + ++HRD+KP+N+ L + K+GDFGL + ND T
Sbjct: 139 LELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGL--VTSLKNDGKRT 193
Query: 498 NVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEV 532
GT+ Y++PE + + D+YA G+ + E+
Sbjct: 194 RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIK 442
E+ + +++H N++ L K +++L+ + + G L L + SL + +K
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLK 120
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANV-LLDADLEG---KLGDFGLARLYDHGNDLHTTN 498
+ G+ YLH + H D+KP N+ LLD ++ K+ DFGLA D GN+ N
Sbjct: 121 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--N 175
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ GT ++APE++ D+++ GV + G P
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 26/216 (12%)
Query: 335 RFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRN 394
RF + + A +G G V G S+ +A+KKV D ++ + + + L H N
Sbjct: 24 RFQVERM--AGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLAVLHHPN 80
Query: 395 LVQLRGYC-------RRKGELLLVYDYMPNGSLDKILYSNTR------PSLNWFQRFRII 441
+VQL+ Y RR L +V +Y+P+ +L + + R P L F++I
Sbjct: 81 IVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLI 139
Query: 442 KGVAFGLLYLHEEWEQVVLHRDIKPANVLL-DADLEGKLGDFGLARLYDHGNDLHTTNVV 500
+ + G L+L V HRDIKP NVL+ +AD KL DFG A+ +
Sbjct: 140 RSI--GCLHLPS---VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEP--NVAYI 192
Query: 501 GTVGYLAPELL-RNGRGTTSTDVYAFGVFMLEVACG 535
+ Y APEL+ N TT+ D+++ G E+ G
Sbjct: 193 CSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIK 442
E+ + +++H N++ L K +++L+ + + G L L + SL + +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLK 121
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANV-LLDADLEG---KLGDFGLARLYDHGNDLHTTN 498
+ G+ YLH + H D+KP N+ LLD ++ K+ DFGLA D GN+ N
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--N 176
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ GT ++APE++ D+++ GV + G P
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 10/202 (4%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC---HDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V +A+KK+ + H + + E+V M + H+N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKN 84
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHS 144
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G T V T Y APE++
Sbjct: 145 AG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 514 GRGTTSTDVYAFGVFMLEVACG 535
+ D+++ G M E+ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIK 442
E+ + +++H N++ L K +++L+ + + G L L + SL + +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLK 121
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANV-LLDADLEG---KLGDFGLARLYDHGNDLHTTN 498
+ G+ YLH + H D+KP N+ LLD ++ K+ DFGLA D GN+ N
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--N 176
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ GT ++APE++ D+++ GV + G P
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 10/202 (4%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC---HDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V +A+KK+ + H + + E+V M + H+N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKN 84
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G T V T Y APE++
Sbjct: 145 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 514 GRGTTSTDVYAFGVFMLEVACG 535
+ D+++ G M E+ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIK 442
E+ + +++H N++ L K +++L+ + + G L L + SL + +K
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLK 120
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANV-LLDADLEG---KLGDFGLARLYDHGNDLHTTN 498
+ G+ YLH + H D+KP N+ LLD ++ K+ DFGLA D GN+ N
Sbjct: 121 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--N 175
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ GT ++APE++ D+++ GV + G P
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIK 442
E+ + +++H N++ L K +++L+ + + G L L + SL + +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLK 121
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANV-LLDADLEG---KLGDFGLARLYDHGNDLHTTN 498
+ G+ YLH + H D+KP N+ LLD ++ K+ DFGLA D GN+ N
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--N 176
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ GT ++APE++ D+++ GV + G P
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 10/202 (4%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC---HDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V +A+KK+ + H + + E+V M + H+N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKN 84
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G T V T Y APE++
Sbjct: 145 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 514 GRGTTSTDVYAFGVFMLEVACG 535
+ D+++ G M E+ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 10/202 (4%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC---HDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V +A+KK+ + H + + E+V M + H+N
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKN 85
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 86 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 145
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G T V T Y APE++
Sbjct: 146 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 200
Query: 514 GRGTTSTDVYAFGVFMLEVACG 535
+ D+++ G M E+ G
Sbjct: 201 MGYKENVDIWSVGCIMGEMIKG 222
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 31/230 (13%)
Query: 392 HRNLVQLRGYCRRKG-ELLLVYDYMPNGSLDKILYSNTRPSLNW-------FQRFRIIK- 442
H N+V L G C + G L+++ ++ G+L L S + + ++ F ++
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 443 ------GVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLH 495
VA G+ +L + +HRD+ N+LL K+ DFGLAR +Y + +
Sbjct: 150 LICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVR 206
Query: 496 TTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYW 554
+ + ++APE + + T +DV++FGV + E+ + G P ++D +
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--EEFCRRL 264
Query: 555 QKGDVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYL 604
++G + A D Y +M + L C H P RP+ ++V++L
Sbjct: 265 KEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 10/202 (4%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC---HDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V +A+KK+ + H + + E+V M + H+N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKN 84
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G T V T Y APE++
Sbjct: 145 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPEVVTRYYRAPEVILG 199
Query: 514 GRGTTSTDVYAFGVFMLEVACG 535
+ D+++ G M E+ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 10/202 (4%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC---HDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V +A+KK+ + H + + E+V M + H+N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKN 84
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G T V T Y APE++
Sbjct: 145 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 514 GRGTTSTDVYAFGVFMLEVACG 535
+ D+++ G M E+ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIK 442
E+ + +++H N++ L K +++L+ + + G L L + SL + +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLK 121
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANV-LLDADLEG---KLGDFGLARLYDHGNDLHTTN 498
+ G+ YLH + H D+KP N+ LLD ++ K+ DFGLA D GN+ N
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--N 176
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ GT ++APE++ D+++ GV + G P
Sbjct: 177 IFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 121/287 (42%), Gaps = 45/287 (15%)
Query: 346 KGGSGKVYRGVLPS-------SHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQL 398
+G K+++GV E+ +K + + + F M KL H++LV
Sbjct: 18 QGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLN 77
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
G C E +LV +++ GSLD L N + +N + + K +A+ + +L E
Sbjct: 78 YGVCFCGDENILVQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAWAMHFLE---ENT 133
Query: 459 VLHRDIKPANVLLDADLEGKLGDFGLARLYDHG---NDLHTTNVVGTVGYLAPELLRNGR 515
++H ++ N+LL + + K G+ +L D G L + + ++ PE + N +
Sbjct: 134 LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPK 193
Query: 516 G-TTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDV-LDASDPRLEGIYVE 573
+TD ++FG + E+ G GD L A D + + + E
Sbjct: 194 NLNLATDKWSFGTTLWEICSG---------------------GDKPLSALDSQRKLQFYE 232
Query: 574 EQMEI-------VLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDI 613
++ ++ + L C PD RPS R +++ L+ PD+
Sbjct: 233 DRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLN-SLFTPDL 278
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIK 442
E+ + +++H N++ L K +++L+ + + G L L + SL + +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLK 121
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANV-LLDADLEG---KLGDFGLARLYDHGNDLHTTN 498
+ G+ YLH + H D+KP N+ LLD ++ K+ DFGLA D GN+ N
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--N 176
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ GT ++APE++ D+++ GV + G P
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIK 442
E+ + +++H N++ L K +++L+ + + G L L + SL + +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLK 121
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANV-LLDADLEG---KLGDFGLARLYDHGNDLHTTN 498
+ G+ YLH + H D+KP N+ LLD ++ K+ DFGLA D GN+ N
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--N 176
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ GT ++APE++ D+++ GV + G P
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 10/202 (4%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC---HDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V +A+KK+ + H + + E+V M + H+N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKN 84
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G T V T Y APE++
Sbjct: 145 AG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 514 GRGTTSTDVYAFGVFMLEVACG 535
+ D+++ G M E+ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 10/202 (4%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC---HDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V +A+KK+ + H + + E+V M + H+N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKN 84
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G T V T Y APE++
Sbjct: 145 AG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 514 GRGTTSTDVYAFGVFMLEVACG 535
+ D+++ G M E+ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIK 442
E+ + +++H N++ L K +++L+ + + G L L + SL + +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLK 121
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANV-LLDADLEG---KLGDFGLARLYDHGNDLHTTN 498
+ G+ YLH + H D+KP N+ LLD ++ K+ DFGLA D GN+ N
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--N 176
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ GT ++APE++ D+++ GV + G P
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIK 442
E+ + +++H N++ L K +++L+ + + G L L + SL + +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLK 121
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANV-LLDADLEG---KLGDFGLARLYDHGNDLHTTN 498
+ G+ YLH + H D+KP N+ LLD ++ K+ DFGLA D GN+ N
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--N 176
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ GT ++APE++ D+++ GV + G P
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIK 442
E+ + +++H N++ L K +++L+ + + G L L + SL + +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLK 121
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANV-LLDADLEG---KLGDFGLARLYDHGNDLHTTN 498
+ G+ YLH + H D+KP N+ LLD ++ K+ DFGLA D GN+ N
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--N 176
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ GT ++APE++ D+++ GV + G P
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 40/220 (18%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKV--CHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYC- 402
+G G VY +++ +A+KKV + K+ + EI + +L+ +++L
Sbjct: 38 RGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDLII 97
Query: 403 ----RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFR-IIKGVAFGLLYLHEEWEQ 457
+ EL +V + + + L K+ + P Q + I+ + G ++HE
Sbjct: 98 PEDLLKFDELYIVLE-IADSDLKKLFKT---PIFLTEQHVKTILYNLLLGEKFIHESG-- 151
Query: 458 VVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNV------------------ 499
++HRD+KPAN LL+ D K+ DFGLAR + D+H N
Sbjct: 152 -IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLK 210
Query: 500 ------VGTVGYLAPEL-LRNGRGTTSTDVYAFGVFMLEV 532
V T Y APEL L T S D+++ G E+
Sbjct: 211 KQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAEL 250
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV L + + +L L+ DY+ G L L R + + Q + + + L +LH+
Sbjct: 121 LVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIY--VGEIVLALEHLHKL 178
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RDIK N+LLD++ L DFGL++ + + GT+ Y+AP+++R G
Sbjct: 179 G---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGG 235
Query: 515 RG--TTSTDVYAFGVFMLEVACGRRP 538
+ D ++ GV M E+ G P
Sbjct: 236 DSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 91/213 (42%), Gaps = 19/213 (8%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKV--------CHDSDHGMKQFVSEIVSMG 388
Y + G G V+ V + E+ VK + C D + + EI +
Sbjct: 25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84
Query: 389 KLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGV--AF 446
++ H N++++ +G LV + +G LD + + P L+ I + + A
Sbjct: 85 RVEHANIIKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDEPLASYIFRQLVSAV 143
Query: 447 GLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYL 506
G L L + ++HRDIK N+++ D KL DFG A + G +T GT+ Y
Sbjct: 144 GYLRLKD-----IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT--FCGTIEYC 196
Query: 507 APELLR-NGRGTTSTDVYAFGVFMLEVACGRRP 538
APE+L N ++++ GV + + P
Sbjct: 197 APEVLMGNPYRGPELEMWSLGVTLYTLVFEENP 229
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 347 GGSGKVYRGV--LPSSHAEIAVKKVCHDSDHG-MKQFVSEIVSMGKLRHRNLVQLRGYCR 403
G G V +GV + ++A+K + ++ ++ + E M +L + +V+L G C+
Sbjct: 347 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ 406
Query: 404 RKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRD 463
+ L+LV + G L K L R + ++ V+ G+ YL E + +HR+
Sbjct: 407 AEA-LMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEE---KNFVHRN 461
Query: 464 IKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGT--VGYLAPELLRNGRGTTSTD 521
+ NVLL K+ DFGL++ + +T G + + APE + + ++ +D
Sbjct: 462 LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSD 521
Query: 522 VYAFGVFMLE-VACGRRPVQ 540
V+++GV M E ++ G++P +
Sbjct: 522 VWSYGVTMWEALSYGQKPYK 541
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 120/260 (46%), Gaps = 33/260 (12%)
Query: 364 IAVKKVCHDSDHG-MKQFVSEIVSMGKL-RHRNLVQLRGYCRRKG-ELLLVYDYMPNGSL 420
+AVK + + H + +SE+ + + H N+V L G C + G L+++ ++ G+L
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 421 DKILYSNTRPSLNW-------FQRFRIIK-------GVAFGLLYLHEEWEQVVLHRDIKP 466
L S + + ++ F ++ VA G+ +L + +HRD+
Sbjct: 122 STYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAA 178
Query: 467 ANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAF 525
N+LL K+ DFGLAR +Y + + + + ++APE + + T +DV++F
Sbjct: 179 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 238
Query: 526 GVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGL 584
GV + E+ + G P ++D + ++G + A D Y +M + L
Sbjct: 239 GVLLWEIFSLGASPYPGVKID--EEFCRRLKEGTRMRAPD------YTTPEMYQTM---L 287
Query: 585 FCSHSNPDTRPSMRQVVQYL 604
C H P RP+ ++V++L
Sbjct: 288 DCWHGEPSQRPTFSELVEHL 307
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 120/260 (46%), Gaps = 33/260 (12%)
Query: 364 IAVKKVCHDSDHG-MKQFVSEIVSMGKL-RHRNLVQLRGYCRRKG-ELLLVYDYMPNGSL 420
+AVK + + H + +SE+ + + H N+V L G C + G L+++ ++ G+L
Sbjct: 97 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 156
Query: 421 DKILYSNTRPSLNW-------FQRFRIIK-------GVAFGLLYLHEEWEQVVLHRDIKP 466
L S + + ++ F ++ VA G+ +L + +HRD+
Sbjct: 157 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAA 213
Query: 467 ANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAF 525
N+LL K+ DFGLAR +Y + + + + ++APE + + T +DV++F
Sbjct: 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 273
Query: 526 GVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGL 584
GV + E+ + G P ++D + ++G + A D Y +M + L
Sbjct: 274 GVLLWEIFSLGASPYPGVKID--EEFCRRLKEGTRMRAPD------YTTPEMYQTM---L 322
Query: 585 FCSHSNPDTRPSMRQVVQYL 604
C H P RP+ ++V++L
Sbjct: 323 DCWHGEPSQRPTFSELVEHL 342
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 120/260 (46%), Gaps = 33/260 (12%)
Query: 364 IAVKKVCHDSDHG-MKQFVSEIVSMGKL-RHRNLVQLRGYCRRKG-ELLLVYDYMPNGSL 420
+AVK + + H + +SE+ + + H N+V L G C + G L+++ ++ G+L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 421 DKILYSNTRPSLNW-------FQRFRIIK-------GVAFGLLYLHEEWEQVVLHRDIKP 466
L S + + ++ F ++ VA G+ +L + +HRD+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAA 167
Query: 467 ANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAF 525
N+LL K+ DFGLAR +Y + + + + ++APE + + T +DV++F
Sbjct: 168 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 526 GVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGL 584
GV + E+ + G P ++D + ++G + A D Y +M + L
Sbjct: 228 GVLLWEIFSLGASPYPGVKID--EEFCRRLKEGTRMRAPD------YTTPEMYQTM---L 276
Query: 585 FCSHSNPDTRPSMRQVVQYL 604
C H P RP+ ++V++L
Sbjct: 277 DCWHGEPSQRPTFSELVEHL 296
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIK 442
E+ + +++H N++ L K +++L+ + + G L L + SL + +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLK 121
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANV-LLDADLEG---KLGDFGLARLYDHGNDLHTTN 498
+ G+ YLH + H D+KP N+ LLD ++ K+ DFGLA D GN+ N
Sbjct: 122 QILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--N 176
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ GT ++APE++ D+++ GV + G P
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIK 442
E+ + +++H N++ L K +++L+ + + G L L + SL + +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAE--KESLTEEEATEFLK 121
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANV-LLDADLEG---KLGDFGLARLYDHGNDLHTTN 498
+ G+ YLH + H D+KP N+ LLD ++ K+ DFGLA D GN+ N
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--N 176
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ GT ++APE++ D+++ GV + G P
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIK 442
E+ + +++H N++ L K +++L+ + + G L L + SL + +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLK 121
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANV-LLDADLEG---KLGDFGLARLYDHGNDLHTTN 498
+ G+ YLH + H D+KP N+ LLD ++ K+ DFGLA D GN+ N
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--N 176
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ GT ++APE++ D+++ GV + G P
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 120/260 (46%), Gaps = 33/260 (12%)
Query: 364 IAVKKVCHDSDHG-MKQFVSEIVSMGKL-RHRNLVQLRGYCRRKG-ELLLVYDYMPNGSL 420
+AVK + + H + +SE+ + + H N+V L G C + G L+++ ++ G+L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 421 DKILYSNTRPSLNW-------FQRFRIIK-------GVAFGLLYLHEEWEQVVLHRDIKP 466
L S + + ++ F ++ VA G+ +L + +HRD+
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAA 176
Query: 467 ANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAF 525
N+LL K+ DFGLAR +Y + + + + ++APE + + T +DV++F
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 526 GVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGL 584
GV + E+ + G P ++D + ++G + A D Y +M + L
Sbjct: 237 GVLLWEIFSLGASPYPGVKID--EEFCRRLKEGTRMRAPD------YTTPEMYQTM---L 285
Query: 585 FCSHSNPDTRPSMRQVVQYL 604
C H P RP+ ++V++L
Sbjct: 286 DCWHGEPSQRPTFSELVEHL 305
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 120/260 (46%), Gaps = 33/260 (12%)
Query: 364 IAVKKVCHDSDHG-MKQFVSEIVSMGKL-RHRNLVQLRGYCRRKG-ELLLVYDYMPNGSL 420
+AVK + + H + +SE+ + + H N+V L G C + G L+++ ++ G+L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 421 DKILYSNTRPSLNW-------FQRFRIIK-------GVAFGLLYLHEEWEQVVLHRDIKP 466
L S + + ++ F ++ VA G+ +L + +HRD+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAA 167
Query: 467 ANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAF 525
N+LL K+ DFGLAR +Y + + + + ++APE + + T +DV++F
Sbjct: 168 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 526 GVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGL 584
GV + E+ + G P ++D + ++G + A D Y +M + L
Sbjct: 228 GVLLWEIFSLGASPYPGVKID--EEFCRRLKEGTRMRAPD------YTTPEMYQTM---L 276
Query: 585 FCSHSNPDTRPSMRQVVQYL 604
C H P RP+ ++V++L
Sbjct: 277 DCWHGEPSQRPTFSELVEHL 296
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 83/198 (41%), Gaps = 12/198 (6%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDS---DHGMKQFVSEI-VSMGKLRHRNLVQLRGY 401
KG GKV + AVK + + K +SE V + ++H LV L
Sbjct: 48 KGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFS 107
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKG-VAFGLLYLHEEWEQVVL 460
+ +L V DY+ G L Y R R R +A L YLH ++
Sbjct: 108 FQTADKLYFVLDYINGGEL---FYHLQRERCFLEPRARFYAAEIASALGYLHS---LNIV 161
Query: 461 HRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTST 520
+RD+KP N+LLD+ L DFGL + N T+ GT YLAPE+L +
Sbjct: 162 YRDLKPENILLDSQGHIVLTDFGLCKENIEHNST-TSTFCGTPEYLAPEVLHKQPYDRTV 220
Query: 521 DVYAFGVFMLEVACGRRP 538
D + G + E+ G P
Sbjct: 221 DWWCLGAVLYEMLYGLPP 238
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Query: 444 VAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGND-LHTTNVVGT 502
++ GL +LH+ + +++RD+K NV+LD++ K+ DFG+ + +H D + T GT
Sbjct: 129 ISIGLFFLHK---RGIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGT 183
Query: 503 VGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
Y+APE++ S D +A+GV + E+ G+ P
Sbjct: 184 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPP 219
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 24/206 (11%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRK 405
KG G+V+RG E+AVK + + +EI LRH N++ +
Sbjct: 52 KGRFGEVWRGKWRGE--EVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNKD 108
Query: 406 G----ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEW-----E 456
+L LV DY +GSL L R ++ ++ A GL +LH E +
Sbjct: 109 NGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 165
Query: 457 QVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGN---DLHTTNVVGTVGYLAPELL-- 511
+ HRD+K N+L+ + + D GLA +D D+ + VGT Y+APE+L
Sbjct: 166 PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD 225
Query: 512 ----RNGRGTTSTDVYAFGVFMLEVA 533
++ D+YA G+ E+A
Sbjct: 226 SINMKHFESFKRADIYAMGLVFWEIA 251
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 9/165 (5%)
Query: 379 QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF 438
+ ++E M +L + +V++ G C + +LV + G L+K L N
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDK--NII 472
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN 498
++ V+ G+ YL E +HRD+ NVLL K+ DFGL++ + +
Sbjct: 473 ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529
Query: 499 VVGT--VGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQ 540
G V + APE + + ++ +DV++FGV M E + G++P +
Sbjct: 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 574
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 447 GLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYL 506
GL Y+H ++HRD+KP+NV ++ D E ++ DFGLAR D T V T Y
Sbjct: 135 GLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADE----EMTGYVATRWYR 187
Query: 507 APELLRNGRGTTST-DVYAFGVFMLEVACGR 536
APE++ N T D+++ G M E+ G+
Sbjct: 188 APEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 33/210 (15%)
Query: 346 KGGSGKVY--RGVLPSSHAEIAVKKV---------CHDSDHGMKQFVSEIVSMGKLRHRN 394
KGG GKV+ R V ++ +I KV D+ H +E + +++H
Sbjct: 27 KGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTK----AERNILEEVKHPF 82
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSL------DKILYSNTRPSLNWFQRFRIIKGVAFGL 448
+V L + G+L L+ +Y+ G L + I +T + ++ L
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFY--------LAEISMAL 134
Query: 449 LYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAP 508
+LH++ +++RD+KP N++L+ KL DFGL + H + T GT+ Y+AP
Sbjct: 135 GHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV-THTFCGTIEYMAP 190
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
E+L + D ++ G M ++ G P
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 28/208 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRK 405
KG G+V+RG E+AVK + + +EI LRH N++ +
Sbjct: 14 KGRFGEVWRGKWRGE--EVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNKD 70
Query: 406 G----ELLLVYDYMPNGSLDKIL--YSNTRPSLNWFQRFRIIKGVAFGLLYLHEEW---- 455
+L LV DY +GSL L Y+ T + ++ A GL +LH E
Sbjct: 71 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIVGTQ 125
Query: 456 -EQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGN---DLHTTNVVGTVGYLAPELL 511
+ + HRD+K N+L+ + + D GLA +D D+ + VGT Y+APE+L
Sbjct: 126 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 185
Query: 512 ------RNGRGTTSTDVYAFGVFMLEVA 533
++ D+YA G+ E+A
Sbjct: 186 DDSINMKHFESFKRADIYAMGLVFWEIA 213
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 9/165 (5%)
Query: 379 QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF 438
+ ++E M +L + +V++ G C + +LV + G L+K L N
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDK--NII 473
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN 498
++ V+ G+ YL E +HRD+ NVLL K+ DFGL++ + +
Sbjct: 474 ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 530
Query: 499 VVGT--VGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQ 540
G V + APE + + ++ +DV++FGV M E + G++P +
Sbjct: 531 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 575
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 9/165 (5%)
Query: 379 QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF 438
+ ++E M +L + +V++ G C + +LV + G L+K L N
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDK--NII 130
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN 498
++ V+ G+ YL E +HRD+ NVLL K+ DFGL++ + +
Sbjct: 131 ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 187
Query: 499 VVGT--VGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQ 540
G V + APE + + ++ +DV++FGV M E + G++P +
Sbjct: 188 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 232
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 9/165 (5%)
Query: 379 QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF 438
+ ++E M +L + +V++ G C + +LV + G L+K L N
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDK--NII 130
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN 498
++ V+ G+ YL E +HRD+ NVLL K+ DFGL++ + +
Sbjct: 131 ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 187
Query: 499 VVGT--VGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQ 540
G V + APE + + ++ +DV++FGV M E + G++P +
Sbjct: 188 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 232
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 8/106 (7%)
Query: 444 VAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR--LYDHGNDLHTTNVVG 501
+A GL +L + +++RD+K NV+LD++ K+ DFG+ + ++D + T G
Sbjct: 451 IAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD---GVTTKXFCG 504
Query: 502 TVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLL 547
T Y+APE++ S D +AFGV + E+ G+ P + + D L
Sbjct: 505 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL 550
>pdb|1GZ9|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli
Lectin In Complex With 2'-Alpha-L-Fucosyllactose
pdb|1GZC|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli
Lectin In Complex With Lactose
Length = 239
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 35/242 (14%)
Query: 40 LKLDGLAKIHPNGLLQLTNTSER------ISGHAFY--PXXXXXXXXXXXXXXXXXXXXX 91
L L G A I +G+LQLT ++ +G Y P
Sbjct: 18 LTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDSTTGTVASFETRFSFS 77
Query: 92 AMFPKLPNYGGHGMAFFISPSTDFSEAVAGSHLGIFNRSNNGQFTNHIFAIELDTVQSPE 151
P G+ FF+ P T A +LG+FN S + A+E DT +P
Sbjct: 78 IEQPYTRPLPADGLVFFMGP-TKSKPAQGYGYLGVFNNSKQDN-SYQTLAVEFDTFSNP- 134
Query: 152 FNDIDGNHVGIDVNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWIDYNGQEKLVNV 211
++ H+GIDVN ++S ++ + L++G+ + I Y+ K+++V
Sbjct: 135 WDPPQVPHIGIDVNSIRSIKT-------------QPFQLDNGQVANVVIKYDAPSKILHV 181
Query: 212 TLAPVPNPKPSRPLLSTS---IDLSQILQDSMYVGLSAATGTR---VSDYYILGWSFNKS 265
L PS + T +D+ Q+L D + VGLS ATG + + + WSF S
Sbjct: 182 VLV-----YPSSGAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDAAETHDVYSWSFQAS 236
Query: 266 GP 267
P
Sbjct: 237 LP 238
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 9/165 (5%)
Query: 379 QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF 438
+ ++E M +L + +V++ G C + +LV + G L+K L N
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDK--NII 128
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN 498
++ V+ G+ YL E +HRD+ NVLL K+ DFGL++ + +
Sbjct: 129 ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 185
Query: 499 VVGT--VGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQ 540
G V + APE + + ++ +DV++FGV M E + G++P +
Sbjct: 186 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 230
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 10/202 (4%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC---HDSDHGMKQFVSEIVSMGKLRHRN 394
Y+NL G G V +A+KK+ + H + + E+V M + H+N
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKN 86
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L + L+ + ++ + G+ +LH
Sbjct: 87 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 146
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR G V T Y APE++
Sbjct: 147 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMVPFVVTRYYRAPEVILG 201
Query: 514 GRGTTSTDVYAFGVFMLEVACG 535
+ D+++ G M E+ G
Sbjct: 202 MGYKENVDIWSVGCIMGEMIKG 223
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 24/206 (11%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRK 405
KG G+V+RG E+AVK + + +EI LRH N++ +
Sbjct: 39 KGRFGEVWRGKWRGE--EVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNKD 95
Query: 406 G----ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEW-----E 456
+L LV DY +GSL L R ++ ++ A GL +LH E +
Sbjct: 96 NGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 152
Query: 457 QVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGN---DLHTTNVVGTVGYLAPELL-- 511
+ HRD+K N+L+ + + D GLA +D D+ + VGT Y+APE+L
Sbjct: 153 PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD 212
Query: 512 ----RNGRGTTSTDVYAFGVFMLEVA 533
++ D+YA G+ E+A
Sbjct: 213 SINMKHFESFKRADIYAMGLVFWEIA 238
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 24/206 (11%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRK 405
KG G+V+RG E+AVK + + +EI LRH N++ +
Sbjct: 13 KGRFGEVWRGKWRGE--EVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNKD 69
Query: 406 G----ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEW-----E 456
+L LV DY +GSL L R ++ ++ A GL +LH E +
Sbjct: 70 NGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 126
Query: 457 QVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGN---DLHTTNVVGTVGYLAPELL-- 511
+ HRD+K N+L+ + + D GLA +D D+ + VGT Y+APE+L
Sbjct: 127 PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD 186
Query: 512 ----RNGRGTTSTDVYAFGVFMLEVA 533
++ D+YA G+ E+A
Sbjct: 187 SINMKHFESFKRADIYAMGLVFWEIA 212
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 24/206 (11%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRK 405
KG G+V+RG E+AVK + + +EI LRH N++ +
Sbjct: 19 KGRFGEVWRGKWRGE--EVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNKD 75
Query: 406 G----ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEW-----E 456
+L LV DY +GSL L R ++ ++ A GL +LH E +
Sbjct: 76 NGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 132
Query: 457 QVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGN---DLHTTNVVGTVGYLAPELL-- 511
+ HRD+K N+L+ + + D GLA +D D+ + VGT Y+APE+L
Sbjct: 133 PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD 192
Query: 512 ----RNGRGTTSTDVYAFGVFMLEVA 533
++ D+YA G+ E+A
Sbjct: 193 SINMKHFESFKRADIYAMGLVFWEIA 218
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 24/206 (11%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRK 405
KG G+V+RG E+AVK + + +EI LRH N++ +
Sbjct: 16 KGRFGEVWRGKWRGE--EVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNKD 72
Query: 406 G----ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEW-----E 456
+L LV DY +GSL L R ++ ++ A GL +LH E +
Sbjct: 73 NGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 129
Query: 457 QVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGN---DLHTTNVVGTVGYLAPELL-- 511
+ HRD+K N+L+ + + D GLA +D D+ + VGT Y+APE+L
Sbjct: 130 PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD 189
Query: 512 ----RNGRGTTSTDVYAFGVFMLEVA 533
++ D+YA G+ E+A
Sbjct: 190 SINMKHFESFKRADIYAMGLVFWEIA 215
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 118/272 (43%), Gaps = 39/272 (14%)
Query: 346 KGGSGKVYRGVL---PSSHAEIAVKKVCHDSD-HGMKQFVSEIVSMGKLRHRNLVQLRG- 400
KG G VY G + + A+K + ++ ++ F+ E + M L H N++ L G
Sbjct: 31 KGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGI 90
Query: 401 YCRRKGELLLVYDYMPNGSLDKILYSNTR-PSLNWFQRFRIIKGVAFGLLYLHEEWEQVV 459
+G ++ YM +G L + + S R P++ F + VA G+ YL E Q
Sbjct: 91 MLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGL--QVARGMEYLAE---QKF 145
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLAR------LYDHGNDLHTTNVVGTVGYLAPELLRN 513
+HRD+ N +LD K+ DFGLAR Y H V + A E L+
Sbjct: 146 VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL---PVKWTALESLQT 202
Query: 514 GRGTTSTDVYAFGVFMLEV----ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEG 569
R TT +DV++FGV + E+ A R + P +L + +G L + +
Sbjct: 203 YRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDL------THFLAQGRRLPQPEYCPDS 256
Query: 570 IYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVV 601
+Y Q C ++P RP+ R +V
Sbjct: 257 LYQVMQQ---------CWEADPAVRPTFRVLV 279
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L + L +V +YMP G + L R S RF + + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 159
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+L+D K+ DFG A+ T + GT YLAPE++ +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCGTPEYLAPEIILSK 213
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 33/210 (15%)
Query: 346 KGGSGKVY--RGVLPSSHAEIAVKKV---------CHDSDHGMKQFVSEIVSMGKLRHRN 394
KGG GKV+ R V ++ +I KV D+ H +E + +++H
Sbjct: 27 KGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTK----AERNILEEVKHPF 82
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSL------DKILYSNTRPSLNWFQRFRIIKGVAFGL 448
+V L + G+L L+ +Y+ G L + I +T + ++ L
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFY--------LAEISMAL 134
Query: 449 LYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAP 508
+LH++ +++RD+KP N++L+ KL DFGL + H + T GT+ Y+AP
Sbjct: 135 GHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV-THXFCGTIEYMAP 190
Query: 509 ELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
E+L + D ++ G M ++ G P
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 11/180 (6%)
Query: 362 AEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLD 421
A+I K DH + + I + L+H N+V+L +G LV+D + G L
Sbjct: 34 AKIINTKKLSARDHQKLEREARICRL--LKHPNIVRLHDSISEEGFHYLVFDLVTGGELF 91
Query: 422 KILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEG---K 478
+ + + R + I+ + + + H ++HRD+KP N+LL + +G K
Sbjct: 92 EDIVA--REYYSEADASHCIQQILESVNHCHL---NGIVHRDLKPENLLLASKSKGAAVK 146
Query: 479 LGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
L DFGLA + G+ GT GYL+PE+LR D++A GV + + G P
Sbjct: 147 LADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L + L +V +YMP G + L R S RF + + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 159
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+L+D K+ DFG A+ T + GT YLAPE++ +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCGTPEYLAPEIILSK 213
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1GSL|A Chain A, Lectin (Fourth Isolated From (Griffonia Simplicifolia))
Complex With Y Human Blood Group Determinant
pdb|1LEC|A Chain A, Structures Of The Lectin Iv Of Griffonia Simplicifolia And
Its Complex With The Lewis B Human Blood Group
Determinant At 2.0 Angstroms Resolution
pdb|1LED|A Chain A, Structures Of The Lectin Iv Of Griffonia Simplicifolia And
Its Complex With The Lewis B Human Blood Group
Determinant At 2.0 Angstroms Resolution
Length = 243
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 21/171 (12%)
Query: 97 LPNYGG---HGMAFFISPSTDFSEAVAGSHLGIFNRSNNGQFT-NHIFAIELDTVQSPEF 152
L NYG G+AFF++P D S G LG+F + N + A+E DT + ++
Sbjct: 80 LKNYGAPTADGLAFFLAP-VDSSVKDYGGFLGLFRHETAADPSKNQVVAVEFDTWINKDW 138
Query: 153 NDIDGNHVGIDVNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWIDYNGQEKLVNVT 212
ND H+GIDVN + S A+ R+ +D+ + S + + I Y+ + K++ V
Sbjct: 139 NDPPYPHIGIDVNSIVS--VATTRWENDDA--YGSSIATAH------ITYDARSKILTVL 188
Query: 213 LAPVPNPKPSRPLLSTSIDLSQILQDSMYVGLSAATG-TRVSDYYILGWSF 262
L+ +LS +DL+++L + +G SA G V+ YIL W F
Sbjct: 189 LS---YEHGRDYILSHVVDLAKVLPQKVRIGFSAGVGYDEVT--YILSWHF 234
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 120/287 (41%), Gaps = 45/287 (15%)
Query: 346 KGGSGKVYRGVLPS-------SHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQL 398
+G K+++GV E+ +K + + + F M KL H++LV
Sbjct: 18 QGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLN 77
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
G C E +LV +++ GSLD L N + +N + + K +A + +L E
Sbjct: 78 YGVCVCGDENILVQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAAAMHFLE---ENT 133
Query: 459 VLHRDIKPANVLLDADLEGKLGDFGLARLYDHG---NDLHTTNVVGTVGYLAPELLRNGR 515
++H ++ N+LL + + K G+ +L D G L + + ++ PE + N +
Sbjct: 134 LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPK 193
Query: 516 G-TTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDV-LDASDPRLEGIYVE 573
+TD ++FG + E+ G GD L A D + + + E
Sbjct: 194 NLNLATDKWSFGTTLWEICSG---------------------GDKPLSALDSQRKLQFYE 232
Query: 574 EQMEI-------VLKLGLFCSHSNPDTRPSMRQVVQYLDGGALLPDI 613
++ ++ + L C PD RPS R +++ L+ PD+
Sbjct: 233 DRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLN-SLFTPDL 278
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 9/165 (5%)
Query: 379 QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF 438
+ ++E M +L + +V++ G C + +LV + G L+K L N
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDK--NII 110
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN 498
++ V+ G+ YL E +HRD+ NVLL K+ DFGL++ + +
Sbjct: 111 ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 167
Query: 499 VVGT--VGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQ 540
G V + APE + + ++ +DV++FGV M E + G++P +
Sbjct: 168 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 212
>pdb|1WBF|A Chain A, Winged Bean Lectin, Saccharide Free Form
pdb|1WBF|B Chain B, Winged Bean Lectin, Saccharide Free Form
pdb|2D3S|A Chain A, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|B Chain B, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|C Chain C, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|D Chain D, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
Length = 242
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 105/260 (40%), Gaps = 45/260 (17%)
Query: 28 NQFIHHGFEGSKLKLDGLAKIHPNGLLQLTNTSERI-----SGHAFY--PXXXXXXXXXX 80
NQF H E KL+ D A+I N +L+LT + +G A Y P
Sbjct: 9 NQF-HQNEEQLKLQRD--ARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTGN 65
Query: 81 XXXXXXXXXXXAMFPKLPNYGGHGMAFFISPSTDFSEAVAGSHLGIFNRSNNGQFTNHIF 140
P + G+ FFI+P + G + GI+N + F
Sbjct: 66 VASFETRFSFSIRQPFPRPHPADGLVFFIAPP-NTQTGEGGGYFGIYNPLSPYPFV---- 120
Query: 141 AIELDTVQSPEFNDIDGNHVGIDVNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWI 200
A+E DT ++ D H+GIDVN + S ++ L++G + I
Sbjct: 121 AVEFDTFRNTW--DPQIPHIGIDVNSVISTKTVP-------------FTLDNGGIANVVI 165
Query: 201 DYNGQEKLVNVTLAPVPNPKPSRPLLSTS---IDLSQILQDSMYVGLSAATG-------T 250
Y+ K+++V L PS + T +DL Q+L +S+ VG SAATG
Sbjct: 166 KYDASTKILHVVLV-----FPSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRN 220
Query: 251 RVSDYYILGWSFNKSGPAQN 270
+ IL WSF+ S P N
Sbjct: 221 ATETHDILSWSFSASLPGTN 240
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 9/165 (5%)
Query: 379 QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF 438
+ ++E M +L + +V++ G C + +LV + G L+K L N
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDK--NII 114
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN 498
++ V+ G+ YL E +HRD+ NVLL K+ DFGL++ + +
Sbjct: 115 ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 171
Query: 499 VVGT--VGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQ 540
G V + APE + + ++ +DV++FGV M E + G++P +
Sbjct: 172 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 216
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 9/165 (5%)
Query: 379 QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF 438
+ ++E M +L + +V++ G C + +LV + G L+K L N
Sbjct: 52 ELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDK--NII 108
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN 498
++ V+ G+ YL E +HRD+ NVLL K+ DFGL++ + +
Sbjct: 109 ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 165
Query: 499 VVGT--VGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQ 540
G V + APE + + ++ +DV++FGV M E + G++P +
Sbjct: 166 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 210
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 9/165 (5%)
Query: 379 QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF 438
+ ++E M +L + +V++ G C + +LV + G L+K L N
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDK--NII 120
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN 498
++ V+ G+ YL E +HRD+ NVLL K+ DFGL++ + +
Sbjct: 121 ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 177
Query: 499 VVGT--VGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQ 540
G V + APE + + ++ +DV++FGV M E + G++P +
Sbjct: 178 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 222
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 9/165 (5%)
Query: 379 QFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF 438
+ ++E M +L + +V++ G C + +LV + G L+K L N
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDK--NII 114
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTN 498
++ V+ G+ YL E +HRD+ NVLL K+ DFGL++ + +
Sbjct: 115 ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQ 171
Query: 499 VVGT--VGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQ 540
G V + APE + + ++ +DV++FGV M E + G++P +
Sbjct: 172 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 216
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 8/106 (7%)
Query: 444 VAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR--LYDHGNDLHTTNVVG 501
+A GL +L + +++RD+K NV+LD++ K+ DFG+ + ++D + T G
Sbjct: 130 IAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD---GVTTKXFCG 183
Query: 502 TVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLL 547
T Y+APE++ S D +AFGV + E+ G+ P + + D L
Sbjct: 184 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL 229
>pdb|1WBL|A Chain A, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|B Chain B, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|C Chain C, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|D Chain D, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|2DTW|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTY|A Chain A, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|B Chain B, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|C Chain C, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|D Chain D, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DU0|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU1|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2E51|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E53|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2ZMK|A Chain A, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|B Chain B, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|C Chain C, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|D Chain D, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZML|A Chain A, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|B Chain B, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|C Chain C, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|D Chain D, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZMN|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
Length = 241
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 105/260 (40%), Gaps = 45/260 (17%)
Query: 28 NQFIHHGFEGSKLKLDGLAKIHPNGLLQLTNTSERI-----SGHAFY--PXXXXXXXXXX 80
NQF H E KL+ D A+I N +L+LT + +G A Y P
Sbjct: 8 NQF-HQNEEQLKLQRD--ARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTGN 64
Query: 81 XXXXXXXXXXXAMFPKLPNYGGHGMAFFISPSTDFSEAVAGSHLGIFNRSNNGQFTNHIF 140
P + G+ FFI+P + G + GI+N + F
Sbjct: 65 VASFETRFSFSIRQPFPRPHPADGLVFFIAPP-NTQTGEGGGYFGIYNPLSPYPFV---- 119
Query: 141 AIELDTVQSPEFNDIDGNHVGIDVNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWI 200
A+E DT ++ D H+GIDVN + S ++ L++G + I
Sbjct: 120 AVEFDTFRNTW--DPQIPHIGIDVNSVISTKTVP-------------FTLDNGGIANVVI 164
Query: 201 DYNGQEKLVNVTLAPVPNPKPSRPLLSTS---IDLSQILQDSMYVGLSAATG-------T 250
Y+ K+++V L PS + T +DL Q+L +S+ VG SAATG
Sbjct: 165 KYDASTKILHVVLV-----FPSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRN 219
Query: 251 RVSDYYILGWSFNKSGPAQN 270
+ IL WSF+ S P N
Sbjct: 220 ATETHDILSWSFSASLPGTN 239
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 23/226 (10%)
Query: 385 VSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF--RIIK 442
+SM + V G R+G++ + + M + SLDK + +I
Sbjct: 102 ISMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAV 160
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTTNVVG 501
+ L +LH + V+HRD+KP+NVL++A + K+ DFG++ L D + T G
Sbjct: 161 SIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDS---VAKTIDAG 215
Query: 502 TVGYLAPELLR---NGRG-TTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKG 557
Y+APE + N +G + +D+++ G+ M+E+A R P W + Q
Sbjct: 216 CKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD-------SWGTPFQQLK 268
Query: 558 DVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQY 603
V++ P+L + + C N RP+ +++Q+
Sbjct: 269 QVVEEPSPQLPADKFSAEF---VDFTSQCLKKNSKERPTYPELMQH 311
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 120/259 (46%), Gaps = 33/259 (12%)
Query: 364 IAVKKVCHDSDHG-MKQFVSEIVSMGKL-RHRNLVQLRGYCRRKG-ELLLVYDYMPNGSL 420
+AVK + + H + +SE+ + + H N+V L G C + G L+++ ++ G+L
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 421 DKILYSNT------RPSLNWFQRFRIIK-------GVAFGLLYLHEEWEQVVLHRDIKPA 467
L S +P + ++ F ++ VA G+ +L + +HRD+
Sbjct: 122 STYLRSKRNEFVPYKPE-DLYKDFLTLEHLIXYSFQVAKGMEFLAS---RKXIHRDLAAR 177
Query: 468 NVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFG 526
N+LL K+ DFGLAR + + + + + ++APE + + T +DV++FG
Sbjct: 178 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 527 VFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGLF 585
V + E+ + G P ++D + ++G + A D Y +M + L
Sbjct: 238 VLLWEIFSLGASPYPGVKID--EEFCRRLKEGTRMRAPD------YTTPEMYQTM---LD 286
Query: 586 CSHSNPDTRPSMRQVVQYL 604
C H P RP+ ++V++L
Sbjct: 287 CWHGEPSQRPTFSELVEHL 305
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 119/259 (45%), Gaps = 32/259 (12%)
Query: 364 IAVKKVCHDSDHG-MKQFVSEIVSMGKL-RHRNLVQLRGYCRRKG-ELLLVYDYMPNGSL 420
+AVK + + H + +SE+ + + H N+V L G C + G L+++ ++ G+L
Sbjct: 61 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 120
Query: 421 DKILYSNT------RPSLNWFQRFRIIK-------GVAFGLLYLHEEWEQVVLHRDIKPA 467
L S + + ++ F ++ VA G+ +L + +HRD+
Sbjct: 121 STYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAAR 177
Query: 468 NVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAFG 526
N+LL K+ DFGLAR + + + + + ++APE + + T +DV++FG
Sbjct: 178 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 527 VFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGLF 585
V + E+ + G P ++D + ++G + A D Y +M + L
Sbjct: 238 VLLWEIFSLGASPYPGVKID--EEFCRRLKEGTRMRAPD------YTTPEMYQTM---LD 286
Query: 586 CSHSNPDTRPSMRQVVQYL 604
C H P RP+ ++V++L
Sbjct: 287 CWHGEPSQRPTFSELVEHL 305
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 337 SYKNLYKATKGGSGKVYRGVLPSSHAEIAVK----KVCHDSDHGMKQFVSEIVSMGKLRH 392
Y+ + KG V R + + E A K K DH + + I + L+H
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRL--LKH 62
Query: 393 RNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLH 452
N+V+L +G LV+D + G L + + + R + I+ + + + H
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA--REYYSEADASHCIQQILESVNHCH 120
Query: 453 EEWEQVVLHRDIKPANVLLDADLEG---KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPE 509
++HRD+KP N+LL + +G KL DFGLA + G+ GT GYL+PE
Sbjct: 121 L---NGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPE 176
Query: 510 LLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
+LR D++A GV + + G P
Sbjct: 177 VLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2SBA|A Chain A, Soybean Agglutinin Complexed With 2,6-Pentasaccharide
pdb|1G9F|A Chain A, Crystal Structure Of The Soybean Agglutinin In A Complex
With A Biantennary Blood Group Antigen Analog
pdb|1SBD|A Chain A, Soybean Agglutinin Complexed With 2,4-pentasaccharide
pdb|1SBE|A Chain A, Soybean Agglutinin From Glycine Max
pdb|1SBF|A Chain A, Soybean Agglutinin
Length = 253
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 25/173 (14%)
Query: 104 GMAFFISPSTDFSEAVAGSHLGIFNRSNNGQFTNHIFAIELDTVQSPEFNDIDGNHVGID 163
G+AFF++P + AG +LG+FN + +G + + A+E DT ++ D H+GI+
Sbjct: 89 GLAFFLAPIDTKPQTHAG-YLGLFNENESG---DQVVAVEFDTFRNSW--DPPNPHIGIN 142
Query: 164 VNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWIDYNGQEKLVNVTLAPVPNPKPSR 223
VN ++S ++ S L + K ++ I Y+ L+ +L P+ + S
Sbjct: 143 VNSIRSIKTTSWD-------------LANNKVAKVLITYDASTSLLVASLV-YPSQRTSN 188
Query: 224 PLLSTSIDLSQILQDSMYVGLSAATGTRV--SDYYILGWSFNKSGP--AQNLD 272
+LS +DL L + + +G SAATG + + +L WSF + P + N+D
Sbjct: 189 -ILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFASNLPHASSNID 240
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 447 GLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYL 506
GL Y+H ++HRD+KP+NV ++ D E ++ DFGLAR D T V T Y
Sbjct: 143 GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADE----EMTGYVATRWYR 195
Query: 507 APELLRNGRGTTST-DVYAFGVFMLEVACGR 536
APE++ N T D+++ G M E+ G+
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 447 GLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYL 506
GL Y+H ++HRD+KP+NV ++ D E ++ DFGLAR D T V T Y
Sbjct: 143 GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADE----EMTGYVATRWYR 195
Query: 507 APELLRNGRGTTST-DVYAFGVFMLEVACGR 536
APE++ N T D+++ G M E+ G+
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 94/216 (43%), Gaps = 28/216 (12%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRK 405
KG G+V+ G E KV ++ +EI +RH N++ K
Sbjct: 47 KGRYGEVWMG---KWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIA-ADIK 102
Query: 406 G-----ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEW----- 455
G +L L+ DY NGSL L S T L+ ++ GL +LH E
Sbjct: 103 GTGSWTQLYLITDYHENGSLYDYLKSTT---LDAKSMLKLAYSSVSGLCHLHTEIFSTQG 159
Query: 456 EQVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGN--DLHTTNVVGTVGYLAPELL- 511
+ + HRD+K N+L+ + + D GLA + N D+ VGT Y+ PE+L
Sbjct: 160 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLD 219
Query: 512 ----RNG-RGTTSTDVYAFGVFMLEVACGRRPVQPG 542
RN + D+Y+FG+ + EVA RR V G
Sbjct: 220 ESLNRNHFQSYIMADMYSFGLILWEVA--RRCVSGG 253
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 11/114 (9%)
Query: 439 RIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTT 497
++ + L YL E+ V+HRD+KP+N+LLD + KL DFG++ RL D D
Sbjct: 128 KMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD---DKAKD 182
Query: 498 NVVGTVGYLAPELLRNGRGTT-----STDVYAFGVFMLEVACGRRPVQPGELDL 546
G Y+APE + T DV++ G+ ++E+A G+ P + + D
Sbjct: 183 RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF 236
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 30/173 (17%)
Query: 381 VSEIVSMGKLRHRNLVQLR----GYCRRKGELLLVYDYMPNGSLDKILY-----SNTRP- 430
EI + +L+H N++ L+ + RK + L++DY + I + +N +P
Sbjct: 66 CREIALLRELKHPNVISLQKVFLSHADRK--VWLLFDYAEHDLWHIIKFHRASKANKKPV 123
Query: 431 SLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEG------KLGDFGL 484
L ++ + G+ YLH W VLHRD+KPAN+L+ EG K+ D G
Sbjct: 124 QLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMG--EGPERGRVKIADMGF 178
Query: 485 ARLYDHG----NDLHTTNVVGTVGYLAPELLRNGRG-TTSTDVYAFGVFMLEV 532
ARL++ DL VV T Y APELL R T + D++A G E+
Sbjct: 179 ARLFNSPLKPLADL--DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL 229
>pdb|3N35|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) With N-
Acetylgalactosamine
pdb|3N36|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) In Complex
With Galactose
pdb|3N3H|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) In Complex
With Citrate
Length = 242
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 27/173 (15%)
Query: 104 GMAFFISPSTDFSEAVAGSHLGIFNRSNNGQFTNHIFAIELDTVQSPEFNDIDGNHVGID 163
G+ FF+ P T A G +LGIFN S + +E DT S +++ H+GID
Sbjct: 90 GLVFFMGP-TKSKPAQGGGYLGIFNNSKQDN-SYQTLGVEFDTF-SNQWDPPQVPHIGID 146
Query: 164 VNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWIDYNGQEKLVNVTLAPVPNPKPSR 223
VN ++S ++ + L++G+ + I Y+ K+++ L PS
Sbjct: 147 VNSIRSIKT-------------QPFQLDNGQVANVVIKYDASSKILHAVLV-----YPSS 188
Query: 224 PLLSTS---IDLSQILQDSMYVGLSAATGTR---VSDYYILGWSFNKSGPAQN 270
+ T +D+ Q+L + + VGLS ATG + + + WSF S P N
Sbjct: 189 GAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFQASLPETN 241
>pdb|1QNW|A Chain A, Lectin Ii From Ulex Europaeus
pdb|1QNW|B Chain B, Lectin Ii From Ulex Europaeus
pdb|1QNW|C Chain C, Lectin Ii From Ulex Europaeus
pdb|1QNW|D Chain D, Lectin Ii From Ulex Europaeus
pdb|1QOO|A Chain A, Lectin Uea-Ii Complexed With Nag
pdb|1QOO|B Chain B, Lectin Uea-Ii Complexed With Nag
pdb|1QOO|C Chain C, Lectin Uea-Ii Complexed With Nag
pdb|1QOO|D Chain D, Lectin Uea-Ii Complexed With Nag
pdb|1QOT|A Chain A, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOT|B Chain B, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOT|C Chain C, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOT|D Chain D, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOS|A Chain A, Lectin Uea-Ii Complexed With Chitobiose
pdb|1QOS|B Chain B, Lectin Uea-Ii Complexed With Chitobiose
pdb|1DZQ|A Chain A, Lectin Uea-Ii Complexed With Galactose
pdb|1DZQ|B Chain B, Lectin Uea-Ii Complexed With Galactose
pdb|1DZQ|C Chain C, Lectin Uea-Ii Complexed With Galactose
pdb|1DZQ|D Chain D, Lectin Uea-Ii Complexed With Galactose
Length = 242
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 101/238 (42%), Gaps = 26/238 (10%)
Query: 42 LDGLAKIHPNGLLQLTNTSERIS---GHAFYPXXXXXXXXXXXXXXXXXXXXXAMFPKLP 98
G A + G+LQ+T S+ + G A Y +
Sbjct: 22 FQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDSITGKVASFATSFSFVVKADK 81
Query: 99 NYGGHGMAFFISPSTDFSEAVAGSHLGIFN--RSNNGQFTNHIFAIELDTVQSPEFN--D 154
+ G G+AFF++P+ S+ +GS G+F S++ + +N I A+E DT +N D
Sbjct: 82 SDGVDGLAFFLAPAN--SQIPSGSSAGMFGLFSSSDSKSSNQIIAVEFDTYFGKAYNPWD 139
Query: 155 IDGNHVGIDVNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWIDYNGQEKLVNVTLA 214
D H+GIDVN ++S ++ + +G+ + I Y K + V L+
Sbjct: 140 PDFKHIGIDVNSIKSIKTVKWDW-------------RNGEVADVVITYRAPTKSLTVCLS 186
Query: 215 PVPNPKPSRPLLSTSIDLSQILQDSMYVGLSAATG--TRVSDYYILGWSFNKSGPAQN 270
P+ S +++ S+DL IL + + VG S G + +L W F + A N
Sbjct: 187 -YPSDGTSN-IITASVDLKAILPEWVSVGFSGGVGNAAEFETHDVLSWYFTSNLEANN 242
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 31/230 (13%)
Query: 392 HRNLVQLRGYCRRKG-ELLLVYDYMPNGSLDKILYSNTRPSLNW-------FQRFRIIK- 442
H N+V L G C + G L+++ ++ G+L L S + + ++ F ++
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 443 ------GVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLH 495
VA G+ +L + +HRD+ N+LL K+ DFGLAR + + +
Sbjct: 150 LICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 496 TTNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYW 554
+ + ++APE + + T +DV++FGV + E+ + G P ++D +
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--EEFCRRL 264
Query: 555 QKGDVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYL 604
++G + A D Y +M + L C H P RP+ ++V++L
Sbjct: 265 KEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 119/260 (45%), Gaps = 33/260 (12%)
Query: 364 IAVKKVCHDSDHG-MKQFVSEIVSMGKL-RHRNLVQLRGYCRRKG-ELLLVYDYMPNGSL 420
+AVK + + H + +SE+ + + H N+V L G C + G L+++ ++ G+L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 110
Query: 421 DKILYSNTRPSLNW-------FQRFRIIK-------GVAFGLLYLHEEWEQVVLHRDIKP 466
L S + + ++ F ++ VA G+ +L + +HRD+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAA 167
Query: 467 ANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAF 525
N+LL K+ DFGLAR + + + + + ++APE + + T +DV++F
Sbjct: 168 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 526 GVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGL 584
GV + E+ + G P ++D + ++G + A D Y +M + L
Sbjct: 228 GVLLWEIFSLGASPYPGVKID--EEFCRRLKEGTRMRAPD------YTTPEMYQTM---L 276
Query: 585 FCSHSNPDTRPSMRQVVQYL 604
C H P RP+ ++V++L
Sbjct: 277 DCWHGEPSQRPTFSELVEHL 296
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 119/260 (45%), Gaps = 33/260 (12%)
Query: 364 IAVKKVCHDSDHG-MKQFVSEIVSMGKL-RHRNLVQLRGYCRRKG-ELLLVYDYMPNGSL 420
+AVK + + H + +SE+ + + H N+V L G C + G L+++ ++ G+L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 421 DKILYSNTRPSLNW-------FQRFRIIK-------GVAFGLLYLHEEWEQVVLHRDIKP 466
L S + + ++ F ++ VA G+ +L + +HRD+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAA 167
Query: 467 ANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDVYAF 525
N+LL K+ DFGLAR + + + + + ++APE + + T +DV++F
Sbjct: 168 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 526 GVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQMEIVLKLGL 584
GV + E+ + G P ++D + ++G + A D Y +M + L
Sbjct: 228 GVLLWEIFSLGASPYPGVKID--EEFCRRLKEGTRMRAPD------YTTPEMYQTM---L 276
Query: 585 FCSHSNPDTRPSMRQVVQYL 604
C H P RP+ ++V++L
Sbjct: 277 DCWHGEPSQRPTFSELVEHL 296
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 101/227 (44%), Gaps = 25/227 (11%)
Query: 385 VSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF--RIIK 442
+SM + V G R+G++ + + M + SLDK + +I
Sbjct: 58 ISMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAV 116
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLA--RLYDHGNDLHTTNVV 500
+ L +LH + V+HRD+KP+NVL++A + K+ DFG++ + D D+
Sbjct: 117 SIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA---- 170
Query: 501 GTVGYLAPELLR---NGRG-TTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQK 556
G Y+APE + N +G + +D+++ G+ M+E+A R P W + Q
Sbjct: 171 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD-------SWGTPFQQL 223
Query: 557 GDVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQY 603
V++ P+L + + C N RP+ +++Q+
Sbjct: 224 KQVVEEPSPQLPADKFSAEF---VDFTSQCLKKNSKERPTYPELMQH 267
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 20/184 (10%)
Query: 354 RGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKGELLLVYD 413
R S++ +I++K D F +E+ + +++ + G E+ ++Y+
Sbjct: 71 RDFTKSNNDKISIKSKYDD-------FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYE 123
Query: 414 YMPNGSLDKI--LYSNTRPSLNWFQRFRIIKGVAFGLL----YLHEEWEQVVLHRDIKPA 467
YM N S+ K + + F ++IK + +L Y+H E + + HRD+KP+
Sbjct: 124 YMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPS 181
Query: 468 NVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTT--STDVYAF 525
N+L+D + KL DFG + ++ D GT ++ PE N D+++
Sbjct: 182 NILMDKNGRVKLSDFGES---EYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSL 238
Query: 526 GVFM 529
G+ +
Sbjct: 239 GICL 242
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 19/182 (10%)
Query: 382 SEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSL-DKILYSNTRPSLNWFQRFRI 440
+EI M +L H L+ L K E++L+ +++ G L D+I + + ++ +
Sbjct: 97 NEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK--MSEAEVINY 154
Query: 441 IKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEG--KLGDFGLARLYDHGNDLHTTN 498
++ GL ++HE ++H DIKP N++ + K+ DFGLA + + T
Sbjct: 155 MRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT- 210
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDL--------LDWV 550
T + APE++ TD++A GV + G P GE DL DW
Sbjct: 211 -TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFA-GEDDLETLQNVKRCDWE 268
Query: 551 ID 552
D
Sbjct: 269 FD 270
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L + L +V +Y+P G + L R S RF + + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 159
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+L+D K+ DFG A+ T + GT YLAPE++ +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCGTPEYLAPEIILSK 213
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 40/86 (46%)
Query: 461 HRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTST 520
HRD+KP N+L+ AD L DFG+A N VGT+ Y APE T
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 521 DVYAFGVFMLEVACGRRPVQPGELDL 546
D+YA + E G P Q +L +
Sbjct: 217 DIYALTCVLYECLTGSPPYQGDQLSV 242
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 101/240 (42%), Gaps = 53/240 (22%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDH--GMKQFVSEIVSMGKLRHRNLVQLRGYC- 402
+G G VY ++ +A+KKV + K+ + EI + +L+ +++L
Sbjct: 36 RGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLII 95
Query: 403 ----RRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLL----YLHEE 454
+ EL +V + + + L K+ + F IK + + LL ++HE
Sbjct: 96 PDDLLKFDELYIVLE-IADSDLKKLFKTPI------FLTEEHIKTILYNLLLGENFIHES 148
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHG------NDL--------HTTNV- 499
++HRD+KPAN LL+ D K+ DFGLAR + NDL H N+
Sbjct: 149 G---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLK 205
Query: 500 ------VGTVGYLAPEL-LRNGRGTTSTDVYAFGVFMLEV----------ACGRRPVQPG 542
V T Y APEL L T S D+++ G E+ R P+ PG
Sbjct: 206 KQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPG 265
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF--RI 440
EI++ LRH N+V+ + L +V +Y G L + + + R S + + F ++
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 124
Query: 441 IKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEG--KLGDFGLARLYDHGNDLHT-- 496
I GV++ V HRD+K N LLD K+ DFG Y + LH+
Sbjct: 125 ISGVSYA-------HAMQVAHRDLKLENTLLDGSPAPRLKIADFG----YSKASVLHSQP 173
Query: 497 TNVVGTVGYLAPE-LLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGE 543
+ VGT Y+APE LL+ DV++ GV + + G P + E
Sbjct: 174 KSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 14/166 (8%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIK 442
EI++ LRH N+V+ + L ++ +Y G L + + + R S + + F +
Sbjct: 66 EIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFF--FQ 123
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEG--KLGDFGLARLYDHGNDLHT--TN 498
+ G+ Y H + HRD+K N LLD K+ DFG Y + LH+ +
Sbjct: 124 QLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFG----YSKSSVLHSQPKS 176
Query: 499 VVGTVGYLAPE-LLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGE 543
VGT Y+APE LLR DV++ GV + + G P + E
Sbjct: 177 TVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPE 222
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 18/168 (10%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF--RI 440
EI++ LRH N+V+ + L +V +Y G L + + + R S + + F ++
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 124
Query: 441 IKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEG--KLGDFGLARLYDHGNDLHT-- 496
I GV+ Y H V HRD+K N LLD K+ DFG Y + LH+
Sbjct: 125 ISGVS----YCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFG----YSKSSVLHSQP 173
Query: 497 TNVVGTVGYLAPE-LLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGE 543
+ VGT Y+APE LL+ DV++ GV + + G P + E
Sbjct: 174 KSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|2E7Q|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7T|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
Length = 237
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 104/257 (40%), Gaps = 45/257 (17%)
Query: 28 NQFIHHGFEGSKLKLDGLAKIHPNGLLQLTNTSERI-----SGHAFY--PXXXXXXXXXX 80
NQF H E KL+ D A+I N +L+LT + +G A Y P
Sbjct: 8 NQF-HQNEEQLKLQRD--ARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTGN 64
Query: 81 XXXXXXXXXXXAMFPKLPNYGGHGMAFFISPSTDFSEAVAGSHLGIFNRSNNGQFTNHIF 140
P + G+ FFI+P + G + GI+N + F
Sbjct: 65 VASFETRFSFSIRQPFPRPHPADGLVFFIAPP-NTQTGEGGGYFGIYNPLSPYPFV---- 119
Query: 141 AIELDTVQSPEFNDIDGNHVGIDVNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWI 200
A+E DT ++ D H+GIDVN + S ++ L++G + I
Sbjct: 120 AVEFDTFRNTW--DPQIPHIGIDVNSVISTKTVP-------------FTLDNGGIANVVI 164
Query: 201 DYNGQEKLVNVTLAPVPNPKPSRPLLSTS---IDLSQILQDSMYVGLSAATG-------T 250
Y+ K+++V L PS + T +DL Q+L +S+ VG SAATG
Sbjct: 165 KYDASTKILHVVLV-----FPSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRN 219
Query: 251 RVSDYYILGWSFNKSGP 267
+ IL WSF+ S P
Sbjct: 220 ATETHDILSWSFSASLP 236
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 24/211 (11%)
Query: 336 FSYKNLYKATKGGSG---KVYRGV-LPSSHA---EIAVKKVCHDSDHGMKQFVSE-IVSM 387
F L K GSG V++GV +P + + +K + S Q V++ ++++
Sbjct: 28 FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI 87
Query: 388 GKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSL-DKILYSN----TRPSLNWFQRFRIIK 442
G L H ++V+L G C L LV Y+P GSL D + + LNW +
Sbjct: 88 GSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ----- 141
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGN-DLHTTNVVG 501
+A G+ YL E ++HR++ NVLL + + ++ DFG+A L + L +
Sbjct: 142 -IAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT 197
Query: 502 TVGYLAPELLRNGRGTTSTDVYAFGVFMLEV 532
+ ++A E + G+ T +DV+++GV + E+
Sbjct: 198 PIKWMALESIHFGKYTHQSDVWSYGVTVWEL 228
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 18/168 (10%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF--RI 440
EI++ LRH N+V+ + L +V +Y G L + + + R S + + F ++
Sbjct: 64 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 123
Query: 441 IKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEG--KLGDFGLARLYDHGNDLHT-- 496
I GV+ Y H V HRD+K N LLD K+ DFG Y + LH+
Sbjct: 124 ISGVS----YCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFG----YSKSSVLHSQP 172
Query: 497 TNVVGTVGYLAPE-LLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGE 543
+ VGT Y+APE LL+ DV++ GV + + G P + E
Sbjct: 173 KSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 220
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 10/202 (4%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC---HDSDHGMKQFVSEIVSMGKLRHRN 394
Y+ L G G V +AVKK+ + H + + E+V + + H+N
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAY-RELVLLKCVNHKN 82
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L L+ + ++ + G+ +LH
Sbjct: 83 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHS 142
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR + T V T Y APE++
Sbjct: 143 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TASTNFMMTPYVVTRYYRAPEVILG 197
Query: 514 GRGTTSTDVYAFGVFMLEVACG 535
+ D+++ G M E+ G
Sbjct: 198 MGYKENVDIWSVGCIMGELVKG 219
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 444 VAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTV 503
+ GL ++H + V++RD+KPAN+LLD ++ D GLA + H + VGT
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP-HAS--VGTH 354
Query: 504 GYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQ 540
GY+APE+L+ G +S D ++ G + ++ G P +
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR 392
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 444 VAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTV 503
+ GL ++H + V++RD+KPAN+LLD ++ D GLA + H + VGT
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP-HAS--VGTH 354
Query: 504 GYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQ 540
GY+APE+L+ G +S D ++ G + ++ G P +
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR 392
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 10/202 (4%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVC---HDSDHGMKQFVSEIVSMGKLRHRN 394
Y+ L G G V +AVKK+ + H + + E+V + + H+N
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAY-RELVLLKCVNHKN 84
Query: 395 LVQLRGYCRRKGELLLVYD-YMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHE 453
++ L + L D Y+ +D L L+ + ++ + G+ +LH
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHS 144
Query: 454 EWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN 513
++HRD+KP+N+++ +D K+ DFGLAR + T V T Y APE++
Sbjct: 145 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TACTNFMMTPYVVTRYYRAPEVILG 199
Query: 514 GRGTTSTDVYAFGVFMLEVACG 535
+ D+++ G M E+ G
Sbjct: 200 MGYAANVDIWSVGCIMGELVKG 221
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 444 VAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTV 503
+ GL ++H + V++RD+KPAN+LLD ++ D GLA + H + VGT
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP-HAS--VGTH 354
Query: 504 GYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQ 540
GY+APE+L+ G +S D ++ G + ++ G P +
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR 392
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L + L +V +Y P G + L R S RF + + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 159
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+++D K+ DFGLA+ T + GT YLAPE++ +
Sbjct: 160 --LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG----RTWXLCGTPEYLAPEIILSK 213
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 444 VAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTV 503
+ GL ++H + V++RD+KPAN+LLD ++ D GLA + H + VGT
Sbjct: 300 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP-HAS--VGTH 353
Query: 504 GYLAPELLRNGRG-TTSTDVYAFGVFMLEVACGRRPVQ 540
GY+APE+L+ G +S D ++ G + ++ G P +
Sbjct: 354 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR 391
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L + L +V +Y P G + L R S RF + + YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 160
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+L+D K+ DFG A+ T + GT YLAPE++ +
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCGTPEYLAPEIILSK 214
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1LTE|A Chain A, Structure Of A Legume Lectin With An Ordered N-Linked
Carbohydrate In Complex With Lactose
Length = 239
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 27/170 (15%)
Query: 104 GMAFFISPSTDFSEAVAGSHLGIFNRSNNGQFTNHIFAIELDTVQSPEFNDIDGNHVGID 163
G+ FF+ P T A +LGIFN+S + +E DT +P ++ H+GID
Sbjct: 90 GLVFFMGP-TKSKPAQGYGYLGIFNQSKQDN-SYQTLGVEFDTFSNP-WDPPQVPHIGID 146
Query: 164 VNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWIDYNGQEKLVNVTLAPVPNPKPSR 223
VN ++S ++ + L++G+ + I Y+ KL++ L PS
Sbjct: 147 VNSIRSIKT-------------QPFQLDNGQVANVVIKYDASSKLLHAVLV-----YPSS 188
Query: 224 PLLSTS---IDLSQILQDSMYVGLSAATGTR---VSDYYILGWSFNKSGP 267
+ T +D+ Q+L + + VGLS ATG + + + WSF S P
Sbjct: 189 GAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFQASLP 238
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 19/157 (12%)
Query: 392 HRNLVQLRGYCRRKGELLLVYDYMPNGSL-----DKILYSNTRPSLNWFQRFRIIKGVAF 446
H N+V+L + LV + + G L K +S T S I++ +
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASY-------IMRKLVS 117
Query: 447 GLLYLHEEWEQVVLHRDIKPANVLL---DADLEGKLGDFGLARLYDHGNDLHTTNVVGTV 503
+ ++H+ V+HRD+KP N+L + +LE K+ DFG ARL N T T+
Sbjct: 118 AVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TL 173
Query: 504 GYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQ 540
Y APELL S D+++ GV + + G+ P Q
Sbjct: 174 HYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQ 210
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 99/197 (50%), Gaps = 21/197 (10%)
Query: 347 GGSGKVYRGV-LPSSHA---EIAVKKVCHDSDHGMKQFVSE-IVSMGKLRHRNLVQLRGY 401
G G V++GV +P + + +K + S Q V++ ++++G L H ++V+L G
Sbjct: 24 GVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGL 83
Query: 402 CRRKGELLLVYDYMPNGSL-DKILYSN----TRPSLNWFQRFRIIKGVAFGLLYLHEEWE 456
C L LV Y+P GSL D + + LNW + +A G+ YL E
Sbjct: 84 CP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMYYLEE--- 133
Query: 457 QVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGN-DLHTTNVVGTVGYLAPELLRNGR 515
++HR++ NVLL + + ++ DFG+A L + L + + ++A E + G+
Sbjct: 134 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 193
Query: 516 GTTSTDVYAFGVFMLEV 532
T +DV+++GV + E+
Sbjct: 194 YTHQSDVWSYGVTVWEL 210
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 115/271 (42%), Gaps = 39/271 (14%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G + R V +++ E AVK V S + + ++ G+ H N++ L+
Sbjct: 38 GSYSECKRCVHKATNMEYAVK-VIDKSKRDPSEEIEILLRYGQ--HPNIITLKDVYDDGK 94
Query: 407 ELLLVYDYMPNGSL-DKIL----YSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ LV + M G L DKIL +S S ++ + + YLH Q V+H
Sbjct: 95 HVYLVTELMRGGELLDKILRQKFFSEREASF-------VLHTIGKTVEYLHS---QGVVH 144
Query: 462 RDIKPANVLLDADLEG-----KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRG 516
RD+KP+N+L D G ++ DFG A+ N L T T ++APE+L+
Sbjct: 145 RDLKPSNILY-VDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLKRQGY 202
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEG----IYV 572
D+++ G+ + + G P G D + ++ G L G
Sbjct: 203 DEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKF------TLSGGNWNTVS 256
Query: 573 EEQMEIVLKLGLFCSHSNPDTRPSMRQVVQY 603
E ++V K+ H +P R + +QV+Q+
Sbjct: 257 ETAKDLVSKM----LHVDPHQRLTAKQVLQH 283
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 401 YCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVL 460
Y RK LL+V + + G L + + + I+K + + YLH +
Sbjct: 98 YAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIA 153
Query: 461 HRDIKPANVLLDADLEG---KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGT 517
HRD+KP N+L + KL DFG A+ N L T T Y+APE+L +
Sbjct: 154 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL--TTPCYTPYYVAPEVLGPEKYD 211
Query: 518 TSTDVYAFGVFMLEVACGRRP 538
S D+++ GV M + CG P
Sbjct: 212 KSCDMWSLGVIMYILLCGYPP 232
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 401 YCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVL 460
Y RK LL+V + + G L + + + I+K + + YLH +
Sbjct: 88 YAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIA 143
Query: 461 HRDIKPANVLLDADLEG---KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGT 517
HRD+KP N+L + KL DFG A+ N L T T Y+APE+L +
Sbjct: 144 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL--TTPCYTPYYVAPEVLGPEKYD 201
Query: 518 TSTDVYAFGVFMLEVACGRRP 538
S D+++ GV M + CG P
Sbjct: 202 KSCDMWSLGVIMYILLCGYPP 222
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 401 YCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVL 460
Y RK LL+V + + G L + + + I+K + + YLH +
Sbjct: 90 YAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIA 145
Query: 461 HRDIKPANVLLDADLEG---KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGT 517
HRD+KP N+L + KL DFG A+ N L T T Y+APE+L +
Sbjct: 146 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL--TTPCYTPYYVAPEVLGPEKYD 203
Query: 518 TSTDVYAFGVFMLEVACGRRP 538
S D+++ GV M + CG P
Sbjct: 204 KSCDMWSLGVIMYILLCGYPP 224
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 401 YCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVL 460
Y RK LL+V + + G L + + + I+K + + YLH +
Sbjct: 89 YAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIA 144
Query: 461 HRDIKPANVLLDADLEG---KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGT 517
HRD+KP N+L + KL DFG A+ N L T T Y+APE+L +
Sbjct: 145 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL--TTPCYTPYYVAPEVLGPEKYD 202
Query: 518 TSTDVYAFGVFMLEVACGRRP 538
S D+++ GV M + CG P
Sbjct: 203 KSCDMWSLGVIMYILLCGYPP 223
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 35/221 (15%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDS-----DHGMKQFVSEIVSMGKLRHRNLVQL-- 398
+G + V+RG + A+K + S D M++F E+ + KL H+N+V+L
Sbjct: 19 QGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREF--EV--LKKLNHKNIVKLFA 74
Query: 399 ---RGYCRRKGELLLVYDYMPNGSLDKILYSNTRP-SLNWFQRFRIIKGVAFGLLYLHEE 454
R K +L+ ++ P GSL +L + L + +++ V G+ +L E
Sbjct: 75 IEEETTTRHK---VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131
Query: 455 WEQVVLHRDIKPANVLLDADLEG----KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPEL 510
++HR+IKP N++ +G KL DFG AR + +D ++ GT YL P++
Sbjct: 132 G---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE--DDEQFVSLYGTEEYLHPDM 186
Query: 511 LRNG--------RGTTSTDVYAFGVFMLEVACGRRPVQPGE 543
+ + D+++ GV A G P +P E
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
>pdb|1UZY|A Chain A, Erythrina Crystagalli Lectin
pdb|1UZY|B Chain B, Erythrina Crystagalli Lectin
pdb|1UZZ|A Chain A, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1UZZ|B Chain B, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1UZZ|C Chain C, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1UZZ|D Chain D, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1V00|A Chain A, Erythrina Cristagalli Lectin
pdb|1V00|B Chain B, Erythrina Cristagalli Lectin
pdb|1V00|C Chain C, Erythrina Cristagalli Lectin
pdb|1V00|D Chain D, Erythrina Cristagalli Lectin
Length = 242
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 99/245 (40%), Gaps = 35/245 (14%)
Query: 40 LKLDGLAKIHPNGLLQLTNTSER------ISGHAFY--PXXXXXXXXXXXXXXXXXXXXX 91
L L G A I +G+LQLT ++ +G Y P
Sbjct: 18 LTLQGAAIITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHIWDMTTGTVASFETRFSFS 77
Query: 92 AMFPKLPNYGGHGMAFFISPSTDFSEAVAGSHLGIFNRSNNGQFTNHIFAIELDTVQSPE 151
P G+ FF+ P T A +LG+FN S + A+E DT +P
Sbjct: 78 IEQPYTRPLPADGLVFFMGP-TKSKPAQGYGYLGVFNNSKQDN-SYQTLAVEFDTFSNP- 134
Query: 152 FNDIDGNHVGIDVNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWIDYNGQEKLVNV 211
++ H+GIDVN ++S ++ + L++G+ + I Y+ K++
Sbjct: 135 WDPPQVPHIGIDVNSIRSIKT-------------QPFQLDNGQVANVVIKYDASSKILLA 181
Query: 212 TLAPVPNPKPSRPLLSTS---IDLSQILQDSMYVGLSAATGTR---VSDYYILGWSFNKS 265
L PS + T +D+ Q+L + + VGLS ATG + + + WSF+ S
Sbjct: 182 VLV-----YPSSGAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFHAS 236
Query: 266 GPAQN 270
P N
Sbjct: 237 LPETN 241
>pdb|1FYU|A Chain A, Crystal Structure Of Erythrina Corallodendron Lectin In
Hexagonal Crystal Form
pdb|1FYU|B Chain B, Crystal Structure Of Erythrina Corallodendron Lectin In
Hexagonal Crystal Form
Length = 255
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 27/173 (15%)
Query: 104 GMAFFISPSTDFSEAVAGSHLGIFNRSNNGQFTNHIFAIELDTVQSPEFNDIDGNHVGID 163
G+ FF+ P T A +LGIFN S + +E DT +P ++ H+GID
Sbjct: 90 GLVFFMGP-TKSKPAQGYGYLGIFNNSKQDN-SYQTLGVEFDTFSNP-WDPPQVPHIGID 146
Query: 164 VNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWIDYNGQEKLVNVTLAPVPNPKPSR 223
VN ++S ++ + L++G+ + I Y+ K+++ L PS
Sbjct: 147 VNSIRSIKT-------------QPFQLDNGQVANVVIKYDASSKILHAVLV-----YPSS 188
Query: 224 PLLSTS---IDLSQILQDSMYVGLSAATGTR---VSDYYILGWSFNKSGPAQN 270
+ T +D+ Q+L + + VGLS ATG + + + WSF S P N
Sbjct: 189 GAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFQASLPETN 241
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 401 YCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVL 460
Y RK LL+V + + G L + + + I+K + + YLH +
Sbjct: 128 YAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIA 183
Query: 461 HRDIKPANVLLDADLEG---KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGT 517
HRD+KP N+L + KL DFG A+ N L T T Y+APE+L +
Sbjct: 184 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL--TTPCYTPYYVAPEVLGPEKYD 241
Query: 518 TSTDVYAFGVFMLEVACGRRP 538
S D+++ GV M + CG P
Sbjct: 242 KSCDMWSLGVIMYILLCGYPP 262
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 401 YCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVL 460
Y RK LL+V + + G L + + + I+K + + YLH +
Sbjct: 82 YAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIA 137
Query: 461 HRDIKPANVLLDADLEG---KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGT 517
HRD+KP N+L + KL DFG A+ N L T T Y+APE+L +
Sbjct: 138 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL--TTPCYTPYYVAPEVLGPEKYD 195
Query: 518 TSTDVYAFGVFMLEVACGRRP 538
S D+++ GV M + CG P
Sbjct: 196 KSCDMWSLGVIMYILLCGYPP 216
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 401 YCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVL 460
Y RK LL+V + + G L + + + I+K + + YLH +
Sbjct: 84 YAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIA 139
Query: 461 HRDIKPANVLLDADLEG---KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGT 517
HRD+KP N+L + KL DFG A+ N L T T Y+APE+L +
Sbjct: 140 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL--TTPCYTPYYVAPEVLGPEKYD 197
Query: 518 TSTDVYAFGVFMLEVACGRRP 538
S D+++ GV M + CG P
Sbjct: 198 KSCDMWSLGVIMYILLCGYPP 218
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 401 YCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVL 460
Y RK LL+V + + G L + + + I+K + + YLH +
Sbjct: 83 YAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIA 138
Query: 461 HRDIKPANVLLDADLEG---KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGT 517
HRD+KP N+L + KL DFG A+ N L T T Y+APE+L +
Sbjct: 139 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL--TTPCYTPYYVAPEVLGPEKYD 196
Query: 518 TSTDVYAFGVFMLEVACGRRP 538
S D+++ GV M + CG P
Sbjct: 197 KSCDMWSLGVIMYILLCGYPP 217
>pdb|1FAY|A Chain A, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|B Chain B, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|C Chain C, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|D Chain D, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|E Chain E, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|F Chain F, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|G Chain G, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|H Chain H, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1F9K|A Chain A, Winged Bean Acidic Lectin Complexed With
Methyl-alpha-d-galactose
pdb|1F9K|B Chain B, Winged Bean Acidic Lectin Complexed With
Methyl-alpha-d-galactose
Length = 238
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 102/249 (40%), Gaps = 35/249 (14%)
Query: 30 FIHHGFEGSKLKLDGLAKIHPNGLLQLTNTSE------RISGHAFY--PXXXXXXXXXXX 81
F H +L L A I NG+L+LT ++ + +G A Y P
Sbjct: 7 FDHFEENSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTGNV 66
Query: 82 XXXXXXXXXXAMFPKLPNYGGHGMAFFISPSTDFSEAVAGSHLGIFNRSNNGQFTNHIFA 141
P G+ FF+ P + G +LG+F ++ FA
Sbjct: 67 ASFETRFSFNITQPYAYPEPADGLTFFMVPPNS-PQGEDGGNLGVFKPPEG----DNAFA 121
Query: 142 IELDTVQSPEFNDIDGNHVGIDVNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWID 201
+E DT Q+ D H+GIDVN + S+++ + LE+G + I
Sbjct: 122 VEFDTFQNTW--DPQVPHIGIDVNSIVSSKTLHFQ-------------LENGGVANVVIK 166
Query: 202 YNGQEKLVNVTLAPVPNPKPSRPLLSTSIDLSQILQDSMY--VGLSAATGTR---VSDYY 256
Y+ K++NV LA + + LS +DL Q +S + VGLSA TG + V +
Sbjct: 167 YDSPTKILNVVLA--FHSVGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHE 224
Query: 257 ILGWSFNKS 265
I+ WSF S
Sbjct: 225 IISWSFTSS 233
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 401 YCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVL 460
Y RK LL+V + + G L + + + I+K + + YLH +
Sbjct: 82 YAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIA 137
Query: 461 HRDIKPANVLLDADLEG---KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGT 517
HRD+KP N+L + KL DFG A+ N L T T Y+APE+L +
Sbjct: 138 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL--TEPCYTPYYVAPEVLGPEKYD 195
Query: 518 TSTDVYAFGVFMLEVACGRRP 538
S D+++ GV M + CG P
Sbjct: 196 KSCDMWSLGVIMYILLCGYPP 216
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 401 YCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVL 460
Y RK LL+V + + G L + + + I+K + + YLH +
Sbjct: 134 YAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIA 189
Query: 461 HRDIKPANVLLDADLEG---KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGT 517
HRD+KP N+L + KL DFG A+ N L T T Y+APE+L +
Sbjct: 190 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL--TTPCYTPYYVAPEVLGPEKYD 247
Query: 518 TSTDVYAFGVFMLEVACGRRP 538
S D+++ GV M + CG P
Sbjct: 248 KSCDMWSLGVIMYILLCGYPP 268
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 401 YCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVL 460
Y RK LL+V + + G L + + + I+K + + YLH +
Sbjct: 84 YAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIA 139
Query: 461 HRDIKPANVLLDADLEG---KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGT 517
HRD+KP N+L + KL DFG A+ N L T T Y+APE+L +
Sbjct: 140 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL--TTPCYTPYYVAPEVLGPEKYD 197
Query: 518 TSTDVYAFGVFMLEVACGRRP 538
S D+++ GV M + CG P
Sbjct: 198 KSCDMWSLGVIMYILLCGYPP 218
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 88/212 (41%), Gaps = 38/212 (17%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGM-----KQFVSEIVSMGKLRHRNLVQL-- 398
+G VY+G+ + E+A C D + ++F E + L+H N+V+
Sbjct: 36 RGSFKTVYKGLDTETTVEVAW---CELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 399 --RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIK---------GVAFG 447
+ K ++LV + +G+L + +RF++ K + G
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLK-----------TYLKRFKVXKIKVLRSWCRQILKG 141
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEG-KLGDFGLARLYDHGNDLHTTNVVGTVGYL 506
L +LH ++ HRD+K N+ + K+GD GLA L V+GT +
Sbjct: 142 LQFLHTRTPPII-HRDLKCDNIFITGPTGSVKIGDLGLATLKRAS---FAKAVIGTPEFX 197
Query: 507 APELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
APE + S DVYAFG LE A P
Sbjct: 198 APEXYEE-KYDESVDVYAFGXCXLEXATSEYP 228
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN-----G 514
+HRDIKP NVLLD + +L DFG + + ++ VGT Y++PE+L+ G
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 272
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D ++ GV M E+ G P
Sbjct: 273 KYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 111/267 (41%), Gaps = 31/267 (11%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRGYCRRKG 406
G + R V +++ E AVK V S + + ++ G+ H N++ L+
Sbjct: 38 GSYSECKRCVHKATNMEYAVK-VIDKSKRDPSEEIEILLRYGQ--HPNIITLKDVYDDGK 94
Query: 407 ELLLVYDYMPNGSL-DKIL----YSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLH 461
+ LV + M G L DKIL +S S ++ + + YLH Q V+H
Sbjct: 95 HVYLVTELMRGGELLDKILRQKFFSEREASF-------VLHTIGKTVEYLHS---QGVVH 144
Query: 462 RDIKPANVLLDADLEG-----KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRG 516
RD+KP+N+L D G ++ DFG A+ N L T T ++APE+L+
Sbjct: 145 RDLKPSNILY-VDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLKRQGY 202
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQM 576
D+++ G+ + + G P G D + ++ G L G
Sbjct: 203 DEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKF------TLSGGNWNTVS 256
Query: 577 EIVLKLGLFCSHSNPDTRPSMRQVVQY 603
E L H +P R + +QV+Q+
Sbjct: 257 ETAKDLVSKMLHVDPHQRLTAKQVLQH 283
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L + L +V +Y+P G + L R S RF + + YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 160
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+L+D ++ DFG A+ T + GT YLAPE++ +
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWTLCGTPEYLAPEIILSK 214
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 460 LHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRN-----G 514
+HRDIKP NVLLD + +L DFG + + ++ VGT Y++PE+L+ G
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 256
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D ++ GV M E+ G P
Sbjct: 257 KYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 111/270 (41%), Gaps = 23/270 (8%)
Query: 341 LYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLRHRNLVQLRG 400
L K + SG++++G + + V KV S + F E + H N++ + G
Sbjct: 15 LTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLG 74
Query: 401 YCRR--KGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
C+ L+ +MP GSL +L+ T ++ Q + +A G+ +LH E +
Sbjct: 75 ACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH-TLEPL 133
Query: 459 VLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTT 518
+ + +V++D D+ ++ + D + + ++APE L+ T
Sbjct: 134 IPRHALNSRSVMIDEDMTARIS------MADVKFSFQSPGRMYAPAWVAPEALQKKPEDT 187
Query: 519 ---STDVYAFGVFMLEVACGRRPVQPGELDLLDWVIDYWQKGDVLDASDPRLEGIYVEEQ 575
S D+++F V + E+ P DL + I + L + P +V +
Sbjct: 188 NRRSADMWSFAVLLWELVTREVPFA----DLSNMEIGMKVALEGLRPTIPPGISPHVSKL 243
Query: 576 MEIVLKLGLFCSHSNPDTRPSMRQVVQYLD 605
M+I C + +P RP +V L+
Sbjct: 244 MKI-------CMNEDPAKRPKFDMIVPILE 266
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKVCHDS-----DHGMKQFVSEIVSMGKLRHRNLVQL-- 398
+G + V+RG + A+K + S D M++F E++ KL H+N+V+L
Sbjct: 19 QGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREF--EVLK--KLNHKNIVKLFA 74
Query: 399 ---RGYCRRKGELLLVYDYMPNGSLDKILYSNTRP-SLNWFQRFRIIKGVAFGLLYLHEE 454
R K +L+ ++ P GSL +L + L + +++ V G+ +L E
Sbjct: 75 IEEETTTRHK---VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131
Query: 455 WEQVVLHRDIKPANVLLDADLEG----KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPEL 510
++HR+IKP N++ +G KL DFG AR + +D + GT YL P++
Sbjct: 132 G---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE--DDEQFVXLYGTEEYLHPDM 186
Query: 511 LRNG--------RGTTSTDVYAFGVFMLEVACGRRPVQPGE 543
+ + D+++ GV A G P +P E
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 15/147 (10%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQ---RFRIIKGVAFGLLYL 451
LV+L + L +V +Y+P G + +S+ R + + RF + + YL
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFEYL 150
Query: 452 HEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL 511
H +++RD+KP N+L+D ++ DFG A+ T + GT YLAPE++
Sbjct: 151 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEII 203
Query: 512 RNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ + D +A GV + E+A G P
Sbjct: 204 LSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 438 FRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHT 496
F++ KG+ F + +HRD+ N+LL K+ DFGLAR +Y + +
Sbjct: 200 FQVAKGMEFLA-------SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 252
Query: 497 TNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQ 555
+ + ++APE + + T +DV++FGV + E+ + G P ++D + +
Sbjct: 253 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--EEFCRRLK 310
Query: 556 KGDVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYL 604
+G + A D Y +M + L C H P RP+ ++V++L
Sbjct: 311 EGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 350
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 438 FRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHT 496
F++ KG+ F + +HRD+ N+LL K+ DFGLAR +Y + +
Sbjct: 198 FQVAKGMEFLA-------SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 250
Query: 497 TNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQ 555
+ + ++APE + + T +DV++FGV + E+ + G P ++D + +
Sbjct: 251 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--EEFCRRLK 308
Query: 556 KGDVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYL 604
+G + A D Y +M + L C H P RP+ ++V++L
Sbjct: 309 EGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 348
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 15/147 (10%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQ---RFRIIKGVAFGLLYL 451
LV+L + L +V +Y+P G + +S+ R + + RF + + YL
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFEYL 157
Query: 452 HEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL 511
H +++RD+KP N+L+D ++ DFG A+ T + GT YLAPE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEII 210
Query: 512 RNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ + D +A GV + E+A G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L + L +V +Y+P G + L R S RF + + YLH
Sbjct: 89 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 145
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+L+D ++ DFG A+ T + GT YLAPE++ +
Sbjct: 146 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWTLCGTPEYLAPEIILSK 199
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 200 GYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L + L +V +Y P G + L R S RF + + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 159
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+++D ++ DFGLA+ T + GT YLAPE++ +
Sbjct: 160 --LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG----RTWXLCGTPEYLAPEIILSK 213
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L + L +V +Y+P G + L R S RF + + YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 160
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+L+D ++ DFG A+ T + GT YLAPE++ +
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSK 214
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L + L +V +Y+P G + L R S RF + + YLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 159
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+L+D ++ DFG A+ T + GT YLAPE++ +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSK 213
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L + L +V +Y+P G + L R S RF + + YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 160
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+L+D ++ DFG A+ T + GT YLAPE++ +
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSK 214
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L + L +V +Y+P G + L R S RF + + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 159
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+L+D ++ DFG A+ T + GT YLAPE++ +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSK 213
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L + L +V +Y+P G + L R S RF + + YLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 159
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+L+D ++ DFG A+ T + GT YLAPE++ +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSK 213
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1DBN|A Chain A, Maackia Amurensis Leukoagglutinin (Lectin) With
Sialyllactose
pdb|1DBN|B Chain B, Maackia Amurensis Leukoagglutinin (Lectin) With
Sialyllactose
Length = 239
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 98 PNYGGHGMAFFISP-STDFSEAVAGSHLGIFNRSNNGQFTNHIFAIELDTVQSPEFNDID 156
P+ G+AF+++P + +LG+FN SN+ +N I A+E DT + ++ D
Sbjct: 82 PDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSNSDS-SNQIVAVEFDTYFAHSYDPWD 140
Query: 157 GN--HVGIDVNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWIDYNGQEKLVNVTLA 214
N H+GIDVNG++S ++ + + L K + + Y + +V
Sbjct: 141 PNYRHIGIDVNGIESIKTVQWDWINGGVAFATITYLAPNKTLIASLVYPSNQTTFSV--- 197
Query: 215 PVPNPKPSRPLLSTSIDLSQILQDSMYVGLSAATG--TRVSDYYILGWSFNKS 265
+ S+DL +IL + + VG SAATG T V + +L WSF +
Sbjct: 198 ------------AASVDLKEILPEWVRVGFSAATGYPTEVETHDVLSWSFTST 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L + L +V +Y+P G + L R S RF + + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 159
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+L+D ++ DFG A+ T + GT YLAPE++ +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSK 213
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQ---RFRIIKGVAFGLLYL 451
LV+L + L +V +Y P G + +S+ R + + RF + + YL
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFEYL 157
Query: 452 HEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL 511
H +++RD+KP N+++D K+ DFG A+ T + GT YLAPE++
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEII 210
Query: 512 RNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ + D +A GV + E+A G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L + L +V +Y+P G + L R S RF + + YLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 159
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+L+D ++ DFG A+ T + GT YLAPE++ +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSK 213
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L + L +V +Y P G + L R S RF + + YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 160
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+++D K+ DFG A+ T + GT YLAPE++ +
Sbjct: 161 --LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSK 214
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 15/147 (10%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQ---RFRIIKGVAFGLLYL 451
LV+L + L +V +Y+P G + +S+ R + + RF + + YL
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFEYL 158
Query: 452 HEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL 511
H +++RD+KP N+L+D ++ DFG A+ T + GT YLAPE++
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEII 211
Query: 512 RNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ + D +A GV + E+A G P
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 438 FRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHT 496
F++ KG+ F + +HRD+ N+LL K+ DFGLAR +Y + +
Sbjct: 205 FQVAKGMEFLA-------SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 257
Query: 497 TNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQ 555
+ + ++APE + + T +DV++FGV + E+ + G P ++D + +
Sbjct: 258 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--EEFCRRLK 315
Query: 556 KGDVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYL 604
+G + A D Y +M + L C H P RP+ ++V++L
Sbjct: 316 EGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 355
>pdb|1QMO|E Chain E, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
pdb|1QMO|F Chain F, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
pdb|1QMO|G Chain G, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
pdb|1QMO|H Chain H, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
Length = 133
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 16/128 (12%)
Query: 138 HIFAIELDTVQSPEFNDIDGNHVGIDVNGLQSNESASARYFSDEKKEFESLVLESGKPIQ 197
++ A+E DT +P++ D + H+GIDVN ++S +A + ++GK
Sbjct: 2 NVVAVEFDTYLNPDYGDPNYIHIGIDVNSIRSKVTAKWDW-------------QNGKIAT 48
Query: 198 IWIDYNGQEKLVNVTLAPVPNPKPSRPLLSTSIDLSQILQDSMYVGLSAATGTRVSDYYI 257
I YN K ++VT + KP+ LS I+L +L + + VGLSA+TG +
Sbjct: 49 AHISYNSVSKRLSVT-SYYAGSKPA--TLSYDIELHTVLPEWVRVGLSASTGQDKERNTV 105
Query: 258 LGWSFNKS 265
WSF S
Sbjct: 106 HSWSFTSS 113
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L + L +V +Y+P G + L R S RF + + YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 160
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+L+D ++ DFG A+ T + GT YLAPE++ +
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSK 214
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L + L +V +Y+P G + L R S RF + + YLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 180
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+L+D ++ DFG A+ T + GT YLAPE++ +
Sbjct: 181 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSK 234
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L + L +V +Y+P G + L R S RF + + YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 160
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+L+D ++ DFG A+ T + GT YLAPE++ +
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSK 214
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L + L +V +Y P G + L R S RF + + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 159
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+++D K+ DFG A+ T + GT YLAPE++ +
Sbjct: 160 --LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSK 213
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 438 FRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHT 496
F++ KG+ F + +HRD+ N+LL K+ DFGLAR +Y + +
Sbjct: 207 FQVAKGMEFLA-------SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 259
Query: 497 TNVVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQ 555
+ + ++APE + + T +DV++FGV + E+ + G P ++D + +
Sbjct: 260 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--EEFCRRLK 317
Query: 556 KGDVLDASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYL 604
+G + A D Y +M + L C H P RP+ ++V++L
Sbjct: 318 EGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 357
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L + L +V +Y+P G + L R S RF + + YLH
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 152
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+L+D ++ DFG A+ T + GT YLAPE++ +
Sbjct: 153 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSK 206
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 207 GYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L + L +V +Y+P G + L R S RF + + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 159
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+L+D ++ DFG A+ T + GT YLAPE++ +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSK 213
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 21/197 (10%)
Query: 347 GGSGKVYRGV-LPSSH---AEIAVKKVCHD-SDHGMKQFVSEIVSMGKLRHRNLVQLRGY 401
G G VY+G+ +P +A+K + + S K+ + E M + + +L G
Sbjct: 28 GAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGI 87
Query: 402 CRRKGELLLVYDYMPNGSLDKILYSN-----TRPSLNWFQRFRIIKGVAFGLLYLHEEWE 456
C + LV MP G L + N ++ LNW + +A G+ YL +
Sbjct: 88 CL-TSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQ------IAKGMSYLED--- 137
Query: 457 QVVLHRDIKPANVLLDADLEGKLGDFGLARLYD-HGNDLHTTNVVGTVGYLAPELLRNGR 515
++HRD+ NVL+ + K+ DFGLARL D + H + ++A E + R
Sbjct: 138 VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRR 197
Query: 516 GTTSTDVYAFGVFMLEV 532
T +DV+++GV + E+
Sbjct: 198 FTHQSDVWSYGVTVWEL 214
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
Query: 460 LHRDIKPANVLLDADLEGKLGDFG-LARLYDHGNDLHTTNVVGTVGYLAPELLR-----N 513
+HRDIKP N+L+D + +L DFG +L + G + ++ VGT Y++PE+L+
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEGGK 255
Query: 514 GRGTTSTDVYAFGVFMLEVACGRRP 538
GR D ++ GV M E+ G P
Sbjct: 256 GRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 15/147 (10%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQ---RFRIIKGVAFGLLYL 451
LV+L + L +V +Y+P G + +S+ R + + RF + + YL
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFEYL 157
Query: 452 HEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL 511
H +++RD+KP N+L+D ++ DFG A+ T + GT YLAPE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEII 210
Query: 512 RNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ + D +A GV + E+A G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIK 442
E+ + ++ H N++ L + +++L+ + + G L L + SL+ + IK
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ--KESLSEEEATSFIK 122
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANV-LLDADL---EGKLGDFGLARLYDHGNDLHTTN 498
+ G+ YLH + + H D+KP N+ LLD ++ KL DFGLA + G + N
Sbjct: 123 QILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KN 177
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ GT ++APE++ D+++ GV + G P
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 104/221 (47%), Gaps = 25/221 (11%)
Query: 338 YKNLYKAT-----KGGSGKVYRGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKLR- 391
++++YK T +G KV V + E AVK + + H + E+ ++ + +
Sbjct: 10 FEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQG 69
Query: 392 HRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYL 451
++N+++L + LV++ + GS+ + + + N + R+++ VA L +L
Sbjct: 70 NKNILELIEFFEDDTRFYLVFEKLQGGSI--LAHIQKQKHFNEREASRVVRDVAAALDFL 127
Query: 452 HEEWEQVVLHRDIKPANVLLDADLE---GKLGDFGLA---RLYDHGNDLHT---TNVVGT 502
H + + HRD+KP N+L ++ + K+ DF L +L + + T T G+
Sbjct: 128 HT---KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGS 184
Query: 503 VGYLAPELLR--NGRGT---TSTDVYAFGVFMLEVACGRRP 538
Y+APE++ + T D+++ GV + + G P
Sbjct: 185 AEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|1AX0|A Chain A, Erythrina Corallodendron Lectin In Complex With
N-Actylgalactosamine
pdb|1AX1|A Chain A, Erythrina Corallodendron Lectin In Complex With Lactose
pdb|1AX2|A Chain A, Erythrina Corallodendron Lectin In Complex With
N-Acetyllactosamine
pdb|1AXY|A Chain A, Erythrina Corallodendron Lectin
pdb|1AXZ|A Chain A, Erythrina Corallodendron Lectin In Complex With
D-Galactose
Length = 239
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 97/242 (40%), Gaps = 35/242 (14%)
Query: 40 LKLDGLAKIHPNGLLQLTNTSER------ISGHAFY--PXXXXXXXXXXXXXXXXXXXXX 91
L L G A I +G+LQLT ++ +G Y P
Sbjct: 18 LTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWDMTTGTVASFETRFSFS 77
Query: 92 AMFPKLPNYGGHGMAFFISPSTDFSEAVAGSHLGIFNRSNNGQFTNHIFAIELDTVQSPE 151
P G+ FF+ P T A +LGIFN S + +E DT +P
Sbjct: 78 IEQPYTRPLPADGLVFFMGP-TKSKPAQGYGYLGIFNNSKQDN-SYQTLGVEFDTFSNP- 134
Query: 152 FNDIDGNHVGIDVNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWIDYNGQEKLVNV 211
++ H+GIDVN ++S ++ + L++G+ + I Y+ K+++
Sbjct: 135 WDPPQVPHIGIDVNSIRSIKT-------------QPFQLDNGQVANVVIKYDASSKILHA 181
Query: 212 TLAPVPNPKPSRPLLSTS---IDLSQILQDSMYVGLSAATGTR---VSDYYILGWSFNKS 265
L PS + T +D+ Q+L + + VGLS ATG + + + WSF S
Sbjct: 182 VLV-----YPSSGAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFQAS 236
Query: 266 GP 267
P
Sbjct: 237 LP 238
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 20/217 (9%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDS--DHGMKQFVSEIVSMGKLRHRNL 395
Y L + GGS KV++ VL A+K V + + + + +EI + KL+ +
Sbjct: 30 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 396 VQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEW 455
+R Y + +Y M G++D + + S++ ++R K + + +H+
Sbjct: 89 KIIRLYDYEITDQY-IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 147
Query: 456 EQVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
++H D+KPAN L+ D KL DFG+A ++ + + VGTV Y+ PE +++
Sbjct: 148 ---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 203
Query: 515 RGTTST-----------DVYAFGVFMLEVACGRRPVQ 540
+ DV++ G + + G+ P Q
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 240
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 20/217 (9%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDS--DHGMKQFVSEIVSMGKLRHRNL 395
Y L + GGS KV++ VL A+K V + + + + +EI + KL+ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 396 VQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEW 455
+R Y + +Y M G++D + + S++ ++R K + + +H+
Sbjct: 117 KIIRLYDYEITDQY-IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 175
Query: 456 EQVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
++H D+KPAN L+ D KL DFG+A ++ + + VGTV Y+ PE +++
Sbjct: 176 ---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 515 RGTTST-----------DVYAFGVFMLEVACGRRPVQ 540
+ DV++ G + + G+ P Q
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 20/217 (9%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDS--DHGMKQFVSEIVSMGKLRHRNL 395
Y L + GGS KV++ VL A+K V + + + + +EI + KL+ +
Sbjct: 14 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 72
Query: 396 VQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEW 455
+R Y + +Y M G++D + + S++ ++R K + + +H+
Sbjct: 73 KIIRLYDYEITDQY-IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 131
Query: 456 EQVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
++H D+KPAN L+ D KL DFG+A ++ + + VGTV Y+ PE +++
Sbjct: 132 ---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 187
Query: 515 RGTTST-----------DVYAFGVFMLEVACGRRPVQ 540
+ DV++ G + + G+ P Q
Sbjct: 188 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 224
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 14/166 (8%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF--RI 440
EI++ LRH N+V+ + L +V +Y G L + + + R S + + F ++
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 124
Query: 441 IKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT--TN 498
I GV+ Y H V HRD+K N LLD +L Y + LH+ +
Sbjct: 125 ISGVS----YCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFG--YSKSSVLHSQPKD 175
Query: 499 VVGTVGYLAPE-LLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGE 543
VGT Y+APE LL+ DV++ GV + + G P + E
Sbjct: 176 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIK 442
E+ + ++ H N++ L + +++L+ + + G L L + SL+ + IK
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ--KESLSEEEATSFIK 122
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANV-LLDADL---EGKLGDFGLARLYDHGNDLHTTN 498
+ G+ YLH + + H D+KP N+ LLD ++ KL DFGLA + G + N
Sbjct: 123 QILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KN 177
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ GT ++APE++ D+++ GV + G P
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1FAT|A Chain A, Phytohemagglutinin-L
pdb|1FAT|B Chain B, Phytohemagglutinin-L
pdb|1FAT|C Chain C, Phytohemagglutinin-L
pdb|1FAT|D Chain D, Phytohemagglutinin-L
Length = 252
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 25/172 (14%)
Query: 96 KLPNYGG--HGMAFFISPSTDFSEAVAGSHLGIFNRSNNGQFTNHIFAIELDTVQSPEFN 153
++PN G G+AF + P G LG+F+ SN+ H A+E DT+ + ++
Sbjct: 77 QVPNNAGPADGLAFALVP-VGSQPKDKGGFLGLFDGSNSNF---HTVAVEFDTLYNKDW- 131
Query: 154 DIDGNHVGIDVNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWIDYNGQEKLVNVTL 213
D H+GIDVN ++S ++ + + E E + I Y+ L+ +L
Sbjct: 132 DPTERHIGIDVNSIRSIKTTRWDFVNGENAE-------------VLITYDSSTNLLVASL 178
Query: 214 APVPNPKPSRPLLSTSIDLSQILQDSMYVGLSAATGT---RVSDYYILGWSF 262
P+ K S ++S ++DL +L + + VG SA TG V +L WSF
Sbjct: 179 V-YPSQKTSF-IVSDTVDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWSF 228
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 20/217 (9%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDS--DHGMKQFVSEIVSMGKLRHRNL 395
Y L + GGS KV++ VL A+K V + + + + +EI + KL+ +
Sbjct: 30 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 396 VQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEW 455
+R Y + +Y M G++D + + S++ ++R K + + +H+
Sbjct: 89 KIIRLYDYEITDQY-IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 147
Query: 456 EQVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
++H D+KPAN L+ D KL DFG+A ++ + + VGTV Y+ PE +++
Sbjct: 148 ---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDM 203
Query: 515 RGTTST-----------DVYAFGVFMLEVACGRRPVQ 540
+ DV++ G + + G+ P Q
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 240
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 105/231 (45%), Gaps = 22/231 (9%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDS--DHGMKQFVSEIVSMGKLRHRNL 395
Y L + GGS KV++ VL A+K V + + + + +EI + KL+ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 396 VQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEW 455
+R Y + +Y M G++D + + S++ ++R K + + +H+
Sbjct: 117 KIIRLYDYEITDQY-IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 175
Query: 456 EQVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
++H D+KPAN L+ D KL DFG+A ++ + + VGTV Y+ PE +++
Sbjct: 176 ---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 515 RGTTST-----------DVYAFGVFMLEVACGRRPVQP--GELDLLDWVID 552
+ DV++ G + + G+ P Q ++ L +ID
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 282
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 14/166 (8%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF--RI 440
EI++ LRH N+V+ + L +V +Y G L + + + R S + + F ++
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 124
Query: 441 IKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT--TN 498
I GV+ Y H V HRD+K N LLD +L Y + LH+ +
Sbjct: 125 ISGVS----YCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFG--YSKSSVLHSQPKS 175
Query: 499 VVGTVGYLAPE-LLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGE 543
VGT Y+APE LL+ DV++ GV + + G P + E
Sbjct: 176 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIK 442
E+ + ++ H N++ L + +++L+ + + G L L + SL+ + IK
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ--KESLSEEEATSFIK 122
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANV-LLDADL---EGKLGDFGLARLYDHGNDLHTTN 498
+ G+ YLH + + H D+KP N+ LLD ++ KL DFGLA + G + N
Sbjct: 123 QILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KN 177
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ GT ++APE++ D+++ GV + G P
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIK 442
E+ + ++ H N++ L + +++L+ + + G L L + SL+ + IK
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ--KESLSEEEATSFIK 122
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANV-LLDADL---EGKLGDFGLARLYDHGNDLHTTN 498
+ G+ YLH + + H D+KP N+ LLD ++ KL DFGLA + G + N
Sbjct: 123 QILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KN 177
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ GT ++APE++ D+++ GV + G P
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1SFY|A Chain A, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|B Chain B, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|C Chain C, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|D Chain D, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|E Chain E, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|F Chain F, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
Length = 239
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 27/170 (15%)
Query: 104 GMAFFISPSTDFSEAVAGSHLGIFNRSNNGQFTNHIFAIELDTVQSPEFNDIDGNHVGID 163
G+ FF+ P T A +LGIFN S + +E DT S +++ H+GID
Sbjct: 90 GLVFFMGP-TKSKPAQGYGYLGIFNNSKQDN-SYQTLGVEFDTF-SNQWDPPQVPHIGID 146
Query: 164 VNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWIDYNGQEKLVNVTLAPVPNPKPSR 223
VN ++S ++ + L++G+ + I Y+ KL++ L PS
Sbjct: 147 VNSIRSIKT-------------QPFQLDNGQVANVVIKYDASSKLLHAVLV-----YPSS 188
Query: 224 PLLSTS---IDLSQILQDSMYVGLSAATGTR---VSDYYILGWSFNKSGP 267
+ T +D+ Q+L + + VGLS ATG + + + WSF S P
Sbjct: 189 GAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFQASLP 238
>pdb|1G8W|A Chain A, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
pdb|1G8W|B Chain B, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
pdb|1G8W|C Chain C, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
pdb|1G8W|D Chain D, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
Length = 233
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 25/172 (14%)
Query: 96 KLPNYGG--HGMAFFISPSTDFSEAVAGSHLGIFNRSNNGQFTNHIFAIELDTVQSPEFN 153
++PN G G+AF + P G LG+F+ SN+ H A+E DT+ + +++
Sbjct: 77 QVPNNAGPADGLAFALVPVGS-QPKDKGGFLGLFDGSNSNF---HTVAVEFDTLYNKDWD 132
Query: 154 DIDGNHVGIDVNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWIDYNGQEKLVNVTL 213
+ H+GIDVN ++S ++ + + E E + I Y+ L+ +L
Sbjct: 133 PTE-RHIGIDVNSIRSIKTTRWDFVNGENAE-------------VLITYDSSTNLLVASL 178
Query: 214 APVPNPKPSRPLLSTSIDLSQILQDSMYVGLSAATGT---RVSDYYILGWSF 262
P+ K S ++S ++DL +L + + VG SA TG V +L WSF
Sbjct: 179 V-YPSQKTSF-IVSDTVDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWSF 228
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 105/231 (45%), Gaps = 22/231 (9%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDS--DHGMKQFVSEIVSMGKLRHRNL 395
Y L + GGS KV++ VL A+K V + + + + +EI + KL+ +
Sbjct: 11 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 396 VQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEW 455
+R Y + +Y M G++D + + S++ ++R K + + +H+
Sbjct: 70 KIIRLYDYEITDQY-IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 128
Query: 456 EQVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
++H D+KPAN L+ D KL DFG+A ++ + + VGTV Y+ PE +++
Sbjct: 129 ---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 184
Query: 515 RGTTST-----------DVYAFGVFMLEVACGRRPVQP--GELDLLDWVID 552
+ DV++ G + + G+ P Q ++ L +ID
Sbjct: 185 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 235
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 20/217 (9%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDS--DHGMKQFVSEIVSMGKLRHRNL 395
Y L + GGS KV++ VL A+K V + + + + +EI + KL+ +
Sbjct: 10 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 68
Query: 396 VQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEW 455
+R Y + +Y M G++D + + S++ ++R K + + +H+
Sbjct: 69 KIIRLYDYEITDQY-IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 127
Query: 456 EQVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
++H D+KPAN L+ D KL DFG+A ++ + + VGTV Y+ PE +++
Sbjct: 128 ---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 183
Query: 515 RGTTST-----------DVYAFGVFMLEVACGRRPVQ 540
+ DV++ G + + G+ P Q
Sbjct: 184 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 220
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIK 442
E+ + ++ H N++ L + +++L+ + + G L L + SL+ + IK
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ--KESLSEEEATSFIK 122
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANV-LLDADL---EGKLGDFGLARLYDHGNDLHTTN 498
+ G+ YLH + + H D+KP N+ LLD ++ KL DFGLA + G + N
Sbjct: 123 QILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KN 177
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ GT ++APE++ D+++ GV + G P
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L + L +V +Y P G + L R S RF + + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 159
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+++D ++ DFG A+ T + GT YLAPE++ +
Sbjct: 160 --LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSK 213
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 11/172 (6%)
Query: 375 HGMKQFVSEIVSMGKLRHRNLVQLRG--YCRRKGELLLVYDYMPNGSLDKILYSNTRPSL 432
+G EI + +LRH+N++QL Y K ++ +V +Y G + ++L S
Sbjct: 48 NGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRF 106
Query: 433 NWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHG 491
Q + GL YLH Q ++H+DIKP N+LL K+ G+A L+
Sbjct: 107 PVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163
Query: 492 NDLHTTNVVGTVGYLAPELLRNGRGTTS---TDVYAFGVFMLEVACGRRPVQ 540
D G+ + PE + NG T S D+++ GV + + G P +
Sbjct: 164 ADDTCRTSQGSPAFQPPE-IANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 81/163 (49%), Gaps = 16/163 (9%)
Query: 444 VAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLAR-LYDHGNDLHTTNVVGT 502
VA G+ +L + +HRD+ N+LL + K+ DFGLAR +Y + + + +
Sbjct: 208 VARGMEFLSS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 503 VGYLAPELLRNGRGTTSTDVYAFGVFMLEV-ACGRRPVQPGELDLLDWVIDYWQKGDVLD 561
+ ++APE + + +T +DV+++GV + E+ + G P ++D + ++G +
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMD--EDFCSRLREGMRMR 322
Query: 562 ASDPRLEGIYVEEQMEIVLKLGLFCSHSNPDTRPSMRQVVQYL 604
A + IY ++ L C H +P RP ++V+ L
Sbjct: 323 APEYSTPEIY---------QIMLDCWHRDPKERPRFAELVEKL 356
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGM----KQFVSEIVSMGKLRH--RNLVQL 398
GG G VY G+ S + +A+K V D SD G + E+V + K+ +++L
Sbjct: 20 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 79
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ R +L+ + P D + R +L V + + H
Sbjct: 80 LDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CG 135
Query: 459 VLHRDIKPANVLLDADL-EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR-G 516
VLHRDIK N+L+D + E KL DFG L D T+ GT Y PE +R R
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 192
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGE 543
S V++ G+ + ++ CG P + E
Sbjct: 193 GRSAAVWSLGILLYDMVCGDIPFEHDE 219
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Query: 405 KGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDI 464
K LL++ + M G L + + + I++ + + +LH + HRD+
Sbjct: 98 KRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDV 154
Query: 465 KPANVLL---DADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTD 521
KP N+L + D KL DFG A+ N L T T Y+APE+L + S D
Sbjct: 155 KPENLLYTSKEKDAVLKLTDFGFAKETTQ-NALQTP--CYTPYYVAPEVLGPEKYDKSCD 211
Query: 522 VYAFGVFMLEVACGRRP 538
+++ GV M + CG P
Sbjct: 212 MWSLGVIMYILLCGFPP 228
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGM----KQFVSEIVSMGKLR--HRNLVQL 398
GG G VY G+ S + +A+K V D SD G + E+V + K+ +++L
Sbjct: 15 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 74
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ R +L+ + P D + R +L V + + H
Sbjct: 75 LDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---XG 130
Query: 459 VLHRDIKPANVLLDADL-EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR-G 516
VLHRDIK N+L+D + E KL DFG L D T+ GT Y PE +R R
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 187
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGE 543
S V++ G+ + ++ CG P + E
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPFEHDE 214
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 15/147 (10%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQ---RFRIIKGVAFGLLYL 451
L +L + L +V +Y P G + +S+ R + + RF + + YL
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFEYL 158
Query: 452 HEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL 511
H +++RD+KP N+++D K+ DFG A+ T + GT YLAPE++
Sbjct: 159 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEII 211
Query: 512 RNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ + D +A GV + E+A G P
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 346 KGGSGKVYRGVLPSSHAEIAVKKV-CHDSDHGMKQFVSEIVSMGKLRHRNLVQ-LRGYCR 403
+GG G V+ A+K++ + + ++ + E+ ++ KL H +V+ +
Sbjct: 15 RGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLE 74
Query: 404 RKGELLL------VYDYMPNGSLDK---ILYSNTRPSLNWFQR---FRIIKGVAFGLLYL 451
+ L VY Y+ K + N R ++ +R I +A + +L
Sbjct: 75 KNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFL 134
Query: 452 HEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHT-----------TNVV 500
H + ++HRD+KP+N+ D K+GDFGL D + T T V
Sbjct: 135 HSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQV 191
Query: 501 GTVGYLAPELLRNGRGTTSTDVYAFGVFMLEV 532
GT Y++PE + + D+++ G+ + E+
Sbjct: 192 GTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
L +L + L +V +Y P G + L R S RF + + YLH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 160
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+++D K+ DFG A+ T + GT YLAPE++ +
Sbjct: 161 --LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSK 214
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGM----KQFVSEIVSMGKLRH--RNLVQL 398
GG G VY G+ S + +A+K V D SD G + E+V + K+ +++L
Sbjct: 18 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 77
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ R +L+ + P D + R +L V + + H
Sbjct: 78 LDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CG 133
Query: 459 VLHRDIKPANVLLDADL-EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR-G 516
VLHRDIK N+L+D + E KL DFG L D T+ GT Y PE +R R
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 190
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGE 543
S V++ G+ + ++ CG P + E
Sbjct: 191 GRSAAVWSLGILLYDMVCGDIPFEHDE 217
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Query: 405 KGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDI 464
K LL++ + M G L + + + I++ + + +LH + HRD+
Sbjct: 79 KRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDV 135
Query: 465 KPANVLL---DADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTD 521
KP N+L + D KL DFG A+ N L T T Y+APE+L + S D
Sbjct: 136 KPENLLYTSKEKDAVLKLTDFGFAKETTQ-NALQTP--CYTPYYVAPEVLGPEKYDKSCD 192
Query: 522 VYAFGVFMLEVACGRRP 538
+++ GV M + CG P
Sbjct: 193 MWSLGVIMYILLCGFPP 209
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
L +L + L +V +Y P G + L R S RF + + YLH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 160
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+++D K+ DFG A+ T + GT YLAPE++ +
Sbjct: 161 --LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSK 214
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGM----KQFVSEIVSMGKLRH--RNLVQL 398
GG G VY G+ S + +A+K V D SD G + E+V + K+ +++L
Sbjct: 48 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 107
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ R +L+ + P D + R +L V + + H
Sbjct: 108 LDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CG 163
Query: 459 VLHRDIKPANVLLDADL-EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR-G 516
VLHRDIK N+L+D + E KL DFG L D T+ GT Y PE +R R
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGE 543
S V++ G+ + ++ CG P + E
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIPFEHDE 247
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGM----KQFVSEIVSMGKLRH--RNLVQL 398
GG G VY G+ S + +A+K V D SD G + E+V + K+ +++L
Sbjct: 20 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 79
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ R +L+ + P D + R +L V + + H
Sbjct: 80 LDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CG 135
Query: 459 VLHRDIKPANVLLDADL-EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR-G 516
VLHRDIK N+L+D + E KL DFG L D T+ GT Y PE +R R
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 192
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGE 543
S V++ G+ + ++ CG P + E
Sbjct: 193 GRSAAVWSLGILLYDMVCGDIPFEHDE 219
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGM----KQFVSEIVSMGKLRH--RNLVQL 398
GG G VY G+ S + +A+K V D SD G + E+V + K+ +++L
Sbjct: 48 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 107
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ R +L+ + P D + R +L V + + H
Sbjct: 108 LDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CG 163
Query: 459 VLHRDIKPANVLLDADL-EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR-G 516
VLHRDIK N+L+D + E KL DFG L D T+ GT Y PE +R R
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGE 543
S V++ G+ + ++ CG P + E
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIPFEHDE 247
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGM----KQFVSEIVSMGKLRH--RNLVQL 398
GG G VY G+ S + +A+K V D SD G + E+V + K+ +++L
Sbjct: 35 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 94
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ R +L+ + P D + R +L V + + H
Sbjct: 95 LDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CG 150
Query: 459 VLHRDIKPANVLLDADL-EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR-G 516
VLHRDIK N+L+D + E KL DFG L D T+ GT Y PE +R R
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 207
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGE 543
S V++ G+ + ++ CG P + E
Sbjct: 208 GRSAAVWSLGILLYDMVCGDIPFEHDE 234
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGM----KQFVSEIVSMGKLRH--RNLVQL 398
GG G VY G+ S + +A+K V D SD G + E+V + K+ +++L
Sbjct: 48 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 107
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ R +L+ + P D + R +L V + + H
Sbjct: 108 LDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CG 163
Query: 459 VLHRDIKPANVLLDADL-EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR-G 516
VLHRDIK N+L+D + E KL DFG L D T+ GT Y PE +R R
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGE 543
S V++ G+ + ++ CG P + E
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIPFEHDE 247
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGM----KQFVSEIVSMGKLRH--RNLVQL 398
GG G VY G+ S + +A+K V D SD G + E+V + K+ +++L
Sbjct: 47 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 106
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ R +L+ + P D + R +L V + + H
Sbjct: 107 LDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CG 162
Query: 459 VLHRDIKPANVLLDADL-EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR-G 516
VLHRDIK N+L+D + E KL DFG L D T+ GT Y PE +R R
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGE 543
S V++ G+ + ++ CG P + E
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFEHDE 246
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGM----KQFVSEIVSMGKLRH--RNLVQL 398
GG G VY G+ S + +A+K V D SD G + E+V + K+ +++L
Sbjct: 47 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 106
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ R +L+ + P D + R +L V + + H
Sbjct: 107 LDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CG 162
Query: 459 VLHRDIKPANVLLDADL-EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR-G 516
VLHRDIK N+L+D + E KL DFG L D T+ GT Y PE +R R
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGE 543
S V++ G+ + ++ CG P + E
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFEHDE 246
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGM----KQFVSEIVSMGKLRH--RNLVQL 398
GG G VY G+ S + +A+K V D SD G + E+V + K+ +++L
Sbjct: 34 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 93
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ R +L+ + P D + R +L V + + H
Sbjct: 94 LDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CG 149
Query: 459 VLHRDIKPANVLLDADL-EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR-G 516
VLHRDIK N+L+D + E KL DFG L D T+ GT Y PE +R R
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 206
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGE 543
S V++ G+ + ++ CG P + E
Sbjct: 207 GRSAAVWSLGILLYDMVCGDIPFEHDE 233
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGM----KQFVSEIVSMGKLRH--RNLVQL 398
GG G VY G+ S + +A+K V D SD G + E+V + K+ +++L
Sbjct: 48 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 107
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ R +L+ + P D + R +L V + + H
Sbjct: 108 LDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CG 163
Query: 459 VLHRDIKPANVLLDADL-EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR-G 516
VLHRDIK N+L+D + E KL DFG L D T+ GT Y PE +R R
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGE 543
S V++ G+ + ++ CG P + E
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIPFEHDE 247
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGM----KQFVSEIVSMGKLRH--RNLVQL 398
GG G VY G+ S + +A+K V D SD G + E+V + K+ +++L
Sbjct: 19 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 78
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ R +L+ + P D + R +L V + + H
Sbjct: 79 LDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CG 134
Query: 459 VLHRDIKPANVLLDADL-EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR-G 516
VLHRDIK N+L+D + E KL DFG L D T+ GT Y PE +R R
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 191
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGE 543
S V++ G+ + ++ CG P + E
Sbjct: 192 GRSAAVWSLGILLYDMVCGDIPFEHDE 218
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 27/203 (13%)
Query: 354 RGVLPSSHAEIAVKKVCHDSDHGMKQFVSEIVSMGKL-RHRNLVQLRGYCRRKGELLLVY 412
R + +++ E AVK + D + EI + + +H N++ L+ + +V
Sbjct: 40 RCIHKATNMEFAVKII----DKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95
Query: 413 DYMPNGSL-DKIL----YSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQVVLHRDIKPA 467
+ M G L DKIL +S S F + ++ YLH Q V+HRD+KP+
Sbjct: 96 ELMKGGELLDKILRQKFFSEREASAVLFTITKTVE-------YLHA---QGVVHRDLKPS 145
Query: 468 NVLLDADLEG-----KLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGRGTTSTDV 522
N+L D G ++ DFG A+ N L T T ++APE+L + D+
Sbjct: 146 NILY-VDESGNPESIRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLERQGYDAACDI 203
Query: 523 YAFGVFMLEVACGRRPVQPGELD 545
++ GV + + G P G D
Sbjct: 204 WSLGVLLYTMLTGYTPFANGPDD 226
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGM----KQFVSEIVSMGKLRH--RNLVQL 398
GG G VY G+ S + +A+K V D SD G + E+V + K+ +++L
Sbjct: 20 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 79
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ R +L+ + P D + R +L V + + H
Sbjct: 80 LDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CG 135
Query: 459 VLHRDIKPANVLLDADL-EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR-G 516
VLHRDIK N+L+D + E KL DFG L D T+ GT Y PE +R R
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 192
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGE 543
S V++ G+ + ++ CG P + E
Sbjct: 193 GRSAAVWSLGILLYDMVCGDIPFEHDE 219
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 26/169 (15%)
Query: 382 SEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQ 436
+EI + KL H +++++ + + + +V + M G L + N R L ++Q
Sbjct: 70 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 128
Query: 437 RFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEG---KLGDFGLARLYDHGND 493
++ YLHE ++HRD+KP NVLL + E K+ DFG +++ +
Sbjct: 129 MLLAVQ-------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 178
Query: 494 LHTTNVVGTVGYLAPELLRNGRGTT----STDVYAFGVFMLEVACGRRP 538
+ T + GT YLAPE+L + GT + D ++ GV + G P
Sbjct: 179 MRT--LCGTPTYLAPEVLVS-VGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGM----KQFVSEIVSMGKLRH--RNLVQL 398
GG G VY G+ S + +A+K V D SD G + E+V + K+ +++L
Sbjct: 47 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 106
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ R +L+ + P D + R +L V + + H
Sbjct: 107 LDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CG 162
Query: 459 VLHRDIKPANVLLDADL-EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR-G 516
VLHRDIK N+L+D + E KL DFG L D T+ GT Y PE +R R
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGE 543
S V++ G+ + ++ CG P + E
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFEHDE 246
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGM----KQFVSEIVSMGKLRH--RNLVQL 398
GG G VY G+ S + +A+K V D SD G + E+V + K+ +++L
Sbjct: 62 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 121
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ R +L+ + P D + R +L V + + H
Sbjct: 122 LDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CG 177
Query: 459 VLHRDIKPANVLLDADL-EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR-G 516
VLHRDIK N+L+D + E KL DFG L D T+ GT Y PE +R R
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 234
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGE 543
S V++ G+ + ++ CG P + E
Sbjct: 235 GRSAAVWSLGILLYDMVCGDIPFEHDE 261
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 26/169 (15%)
Query: 382 SEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQ 436
+EI + KL H +++++ + + + +V + M G L + N R L ++Q
Sbjct: 63 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 121
Query: 437 RFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEG---KLGDFGLARLYDHGND 493
+ + YLHE ++HRD+KP NVLL + E K+ DFG +++ +
Sbjct: 122 -------MLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 171
Query: 494 LHTTNVVGTVGYLAPELLRNGRGTT----STDVYAFGVFMLEVACGRRP 538
+ T + GT YLAPE+L + GT + D ++ GV + G P
Sbjct: 172 MRT--LCGTPTYLAPEVLVSV-GTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGM----KQFVSEIVSMGKLRH--RNLVQL 398
GG G VY G+ S + +A+K V D SD G + E+V + K+ +++L
Sbjct: 47 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 106
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ R +L+ + P D + R +L V + + H
Sbjct: 107 LDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CG 162
Query: 459 VLHRDIKPANVLLDADL-EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR-G 516
VLHRDIK N+L+D + E KL DFG L D T+ GT Y PE +R R
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGE 543
S V++ G+ + ++ CG P + E
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFEHDE 246
>pdb|1N47|A Chain A, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
pdb|1N47|B Chain B, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
pdb|1N47|C Chain C, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
pdb|1N47|D Chain D, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
Length = 233
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 26/167 (15%)
Query: 104 GMAFFISPSTDFSEAVAGSHLGIF-NRSNNGQFTNHIFAIELDTVQSPEFNDIDGNHVGI 162
G+AFF++P D G LG+F +R+++ + A+E DT + D + H+GI
Sbjct: 86 GLAFFLAPP-DTQPQARGGFLGLFADRAHDASY--QTVAVEFDTYSNAW--DPNYTHIGI 140
Query: 163 DVNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWIDYNGQEKLVNVTLA-PVPNPKP 221
D NG++S K+ + G+ I I Y K + +L PV
Sbjct: 141 DTNGIES-------------KKTTPFDMVYGEKANIVITYQASTKALAASLVFPVSQTSY 187
Query: 222 SRPLLSTSIDLSQILQDSMYVGLSAATGTR---VSDYYILGWSFNKS 265
+ +S +DL IL + + VG SA TG V + I+ WSF S
Sbjct: 188 A---VSARVDLRDILPEYVRVGFSATTGLNAGVVETHDIVSWSFAVS 231
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGM----KQFVSEIVSMGKLRH--RNLVQL 398
GG G VY G+ S + +A+K V D SD G + E+V + K+ +++L
Sbjct: 15 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 74
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ R +L+ + P D + R +L V + + H
Sbjct: 75 LDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CG 130
Query: 459 VLHRDIKPANVLLDADL-EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR-G 516
VLHRDIK N+L+D + E KL DFG L D T+ GT Y PE +R R
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 187
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGE 543
S V++ G+ + ++ CG P + E
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPFEHDE 214
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 26/169 (15%)
Query: 382 SEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQ 436
+EI + KL H +++++ + + + +V + M G L + N R L ++Q
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 437 RFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEG---KLGDFGLARLYDHGND 493
+ + YLHE ++HRD+KP NVLL + E K+ DFG +++ +
Sbjct: 123 -------MLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 172
Query: 494 LHTTNVVGTVGYLAPELLRNGRGTT----STDVYAFGVFMLEVACGRRP 538
+ T + GT YLAPE+L + GT + D ++ GV + G P
Sbjct: 173 MRT--LCGTPTYLAPEVLVSV-GTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGM----KQFVSEIVSMGKLRH--RNLVQL 398
GG G VY G+ S + +A+K V D SD G + E+V + K+ +++L
Sbjct: 34 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 93
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ R +L+ + P D + R +L V + + H
Sbjct: 94 LDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CG 149
Query: 459 VLHRDIKPANVLLDADL-EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR-G 516
VLHRDIK N+L+D + E KL DFG L D T+ GT Y PE +R R
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 206
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGE 543
S V++ G+ + ++ CG P + E
Sbjct: 207 GRSAAVWSLGILLYDMVCGDIPFEHDE 233
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGM----KQFVSEIVSMGKLRH--RNLVQL 398
GG G VY G+ S + +A+K V D SD G + E+V + K+ +++L
Sbjct: 15 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 74
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ R +L+ + P D + R +L V + + H
Sbjct: 75 LDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CG 130
Query: 459 VLHRDIKPANVLLDADL-EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR-G 516
VLHRDIK N+L+D + E KL DFG L D T+ GT Y PE +R R
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 187
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGE 543
S V++ G+ + ++ CG P + E
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPFEHDE 214
>pdb|3U4X|A Chain A, Crystal Structure Of A Lectin From Camptosema Pedicellatum
Seeds In Complex With
5-Bromo-4-Chloro-3-Indolyl-Alpha-D-Mannose
Length = 236
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 22/139 (15%)
Query: 139 IFAIELDTVQSPEFNDIDGNHVGIDVNGLQSNESASARYFSDEKKEFESLVLESGKPIQI 198
I A+ELDT + + D + H+GI++ ++S A+ R+ ++ GK
Sbjct: 4 IVAVELDTYPNTDIGDPNYQHIGINIKSIRSK--ATTRWN-----------VQDGKVGTA 50
Query: 199 WIDYNGQEKLVNVTLAPVPNPKPSRPLLSTSIDLSQILQDSMYVGLSAATGTRVSDYYIL 258
I YN K ++ A V P S +S +DL+ IL + + VGLSA+TG IL
Sbjct: 51 HISYNSVAKRLS---AIVSYPGGSSATVSYDVDLNNILPEWVRVGLSASTGVYKETNTIL 107
Query: 259 GWSF------NKSGPAQNL 271
WSF N + AQ+L
Sbjct: 108 SWSFTSKLKTNSTADAQSL 126
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGM----KQFVSEIVSMGKLRH--RNLVQL 398
GG G VY G+ S + +A+K V D SD G + E+V + K+ +++L
Sbjct: 62 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 121
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ R +L+ + P D + R +L V + + H
Sbjct: 122 LDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CG 177
Query: 459 VLHRDIKPANVLLDADL-EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR-G 516
VLHRDIK N+L+D + E KL DFG L D T+ GT Y PE +R R
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 234
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGE 543
S V++ G+ + ++ CG P + E
Sbjct: 235 GRSAAVWSLGILLYDMVCGDIPFEHDE 261
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGM----KQFVSEIVSMGKLRH--RNLVQL 398
GG G VY G+ S + +A+K V D SD G + E+V + K+ +++L
Sbjct: 35 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 94
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ R +L+ + P D + R +L V + + H
Sbjct: 95 LDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CG 150
Query: 459 VLHRDIKPANVLLDADL-EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR-G 516
VLHRDIK N+L+D + E KL DFG L D T+ GT Y PE +R R
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 207
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGE 543
S V++ G+ + ++ CG P + E
Sbjct: 208 GRSAAVWSLGILLYDMVCGDIPFEHDE 234
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 26/169 (15%)
Query: 382 SEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQ 436
+EI + KL H +++++ + + + +V + M G L + N R L ++Q
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 437 RFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEG---KLGDFGLARLYDHGND 493
+ + YLHE ++HRD+KP NVLL + E K+ DFG +++ +
Sbjct: 123 -------MLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 172
Query: 494 LHTTNVVGTVGYLAPELLRNGRGTT----STDVYAFGVFMLEVACGRRP 538
+ T + GT YLAPE+L + GT + D ++ GV + G P
Sbjct: 173 MRT--LCGTPTYLAPEVLVSV-GTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 26/169 (15%)
Query: 382 SEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQ 436
+EI + KL H +++++ + + + +V + M G L + N R L ++Q
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 437 RFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEG---KLGDFGLARLYDHGND 493
+ + YLHE ++HRD+KP NVLL + E K+ DFG +++ +
Sbjct: 123 -------MLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 172
Query: 494 LHTTNVVGTVGYLAPELLRNGRGTT----STDVYAFGVFMLEVACGRRP 538
+ T + GT YLAPE+L + GT + D ++ GV + G P
Sbjct: 173 MRT--LCGTPTYLAPEVLVSV-GTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGM----KQFVSEIVSMGKLRH--RNLVQL 398
GG G VY G+ S + +A+K V D SD G + E+V + K+ +++L
Sbjct: 35 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 94
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ R +L+ + P D + R +L V + + H
Sbjct: 95 LDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CG 150
Query: 459 VLHRDIKPANVLLDADL-EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR-G 516
VLHRDIK N+L+D + E KL DFG L D T+ GT Y PE +R R
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 207
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGE 543
S V++ G+ + ++ CG P + E
Sbjct: 208 GRSAAVWSLGILLYDMVCGDIPFEHDE 234
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGM----KQFVSEIVSMGKLRH--RNLVQL 398
GG G VY G+ S + +A+K V D SD G + E+V + K+ +++L
Sbjct: 42 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 101
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ R +L+ + P D + R +L V + + H
Sbjct: 102 LDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CG 157
Query: 459 VLHRDIKPANVLLDADL-EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR-G 516
VLHRDIK N+L+D + E KL DFG L D T+ GT Y PE +R R
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 214
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGE 543
S V++ G+ + ++ CG P + E
Sbjct: 215 GRSAAVWSLGILLYDMVCGDIPFEHDE 241
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 11/168 (6%)
Query: 390 LRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRF--RIIKGVAFG 447
L+H ++V+L G L +V+++M L + + + ++ +
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 448 LLYLHEEWEQVVLHRDIKPANVLLDADLEG---KLGDFGLA-RLYDHGNDLHTTNVVGTV 503
L Y H+ ++HRD+KP NVLL + KLGDFG+A +L + G L VGT
Sbjct: 143 LRYCHD---NNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG--LVAGGRVGTP 197
Query: 504 GYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRPVQPGELDLLDWVI 551
++APE+++ DV+ GV + + G P + L + +I
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGII 245
>pdb|2OVU|A Chain A, Crystal Strucure Of A Lectin From Canavalia Gladiata (Cgl)
In Complex With Man1-2man-Ome
Length = 237
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 16/124 (12%)
Query: 139 IFAIELDTVQSPEFNDIDGNHVGIDVNGLQSNESASARYFSDEKKEFESLVLESGKPIQI 198
I A+ELDT + + D D H+GID+ ++S ++A +++GK
Sbjct: 4 IVAVELDTYPNTDIGDPDYPHIGIDIKSVRSKKTAKWN-------------MQNGKVGTA 50
Query: 199 WIDYNGQEKLVNVTLAPVPNPKPSRPLLSTSIDLSQILQDSMYVGLSAATGTRVSDYYIL 258
I YN K ++ A V P +S +DL +L + + VGLSA+TG IL
Sbjct: 51 HIIYNSVGKRLS---AVVSYPNGDSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTIL 107
Query: 259 GWSF 262
WSF
Sbjct: 108 SWSF 111
>pdb|2D3P|A Chain A, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph
pdb|2D3P|B Chain B, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph
pdb|2D3P|C Chain C, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph
pdb|2D3P|D Chain D, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph
pdb|2D3R|A Chain A, Cratylia Folibunda Seed Lectin At Acidic Ph
pdb|2D3R|B Chain B, Cratylia Folibunda Seed Lectin At Acidic Ph
pdb|2D3R|C Chain C, Cratylia Folibunda Seed Lectin At Acidic Ph
pdb|2D3R|D Chain D, Cratylia Folibunda Seed Lectin At Acidic Ph
Length = 236
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 22/139 (15%)
Query: 139 IFAIELDTVQSPEFNDIDGNHVGIDVNGLQSNESASARYFSDEKKEFESLVLESGKPIQI 198
I A+ELDT + + D + H+GI++ ++S A+ R+ ++ GK
Sbjct: 4 IVAVELDTYPNTDIGDPNYQHIGINIKSIRSK--ATTRWN-----------VQDGKVGTA 50
Query: 199 WIDYNGQEKLVNVTLAPVPNPKPSRPLLSTSIDLSQILQDSMYVGLSAATGTRVSDYYIL 258
I YN K ++ A V P S +S +DL+ IL + + VGLSA+TG IL
Sbjct: 51 HISYNSVAKRLS---AIVSYPGGSSATVSYDVDLNNILPEWVRVGLSASTGLYKETNTIL 107
Query: 259 GWSF------NKSGPAQNL 271
WSF N + AQ+L
Sbjct: 108 SWSFTSKLKTNSTADAQSL 126
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGM----KQFVSEIVSMGKLRH--RNLVQL 398
GG G VY G+ S + +A+K V D SD G + E+V + K+ +++L
Sbjct: 54 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 113
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ R +L+ + P D + R +L V + + H
Sbjct: 114 LDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CG 169
Query: 459 VLHRDIKPANVLLDADL-EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR-G 516
VLHRDIK N+L+D + E KL DFG L D T+ GT Y PE +R R
Sbjct: 170 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 226
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGE 543
S V++ G+ + ++ CG P + E
Sbjct: 227 GRSAAVWSLGILLYDMVCGDIPFEHDE 253
>pdb|1FNY|A Chain A, Legume Lectin Of The Bark Of Robinia Pseudoacacia.
pdb|1FNZ|A Chain A, A Bark Lectin From Robinia Pseudoacacia In Complex With N-
Acetylgalactosamine
Length = 237
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 98/236 (41%), Gaps = 33/236 (13%)
Query: 44 GLAKIHPNGLLQLTNT-----SERISGHAFY--PXXXXXXXXXXXXXXXXXXXXXAMFPK 96
G A + G+LQLTN S + G A Y P P
Sbjct: 22 GDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDSTTGNVASFVTSFTFIIQAPN 81
Query: 97 LPNYGGHGMAFFISPSTDFSEAVAGSHLGIFNRSNNGQF--TNHIFAIELDTVQSPEFND 154
P G+AFF++P D G LGIF +G F +N I A+E DT + ++ D
Sbjct: 82 -PATTADGLAFFLAP-VDTQPLDLGGMLGIFK---DGYFNKSNQIVAVEFDTFSNGDW-D 135
Query: 155 IDGNHVGIDVNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWIDYNGQEKLVNVTLA 214
G H+GI+VN ++S ++ + +G+ ++I Y K + +L
Sbjct: 136 PKGRHLGINVNSIESIKTVPWNW-------------TNGEVANVFISYEASTKSLTASLV 182
Query: 215 PVPNPKPSRPLLSTSIDLSQILQDSMYVGLSAATGTR---VSDYYILGWSFNKSGP 267
P+ + S ++ +D+ +L + + G SA TG V +L WSF + P
Sbjct: 183 -YPSLETSF-IIDAIVDVKIVLPEWVRFGFSATTGIDKGYVQTNDVLSWSFESNLP 236
>pdb|1MVQ|A Chain A, Cratylia Mollis Lectin (Isoform 1) In Complex With
Methyl-Alpha-D- Mannose
Length = 236
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 22/139 (15%)
Query: 139 IFAIELDTVQSPEFNDIDGNHVGIDVNGLQSNESASARYFSDEKKEFESLVLESGKPIQI 198
I A+ELDT + + D H+GI++ ++S A+ R+ +++GK
Sbjct: 4 IVAVELDTYPNTDIGDPSYQHIGINIKSIRSK--ATTRW-----------DVQNGKVGTA 50
Query: 199 WIDYNGQEKLVNVTLAPVPNPKPSRPLLSTSIDLSQILQDSMYVGLSAATGTRVSDYYIL 258
I YN K ++ A V P S +S +DL+ IL + + VGLSA+TG IL
Sbjct: 51 HISYNSVAKRLS---AVVSYPGGSSATVSYDVDLNNILPEWVRVGLSASTGLYKETNTIL 107
Query: 259 GWSF------NKSGPAQNL 271
WSF N + AQ+L
Sbjct: 108 SWSFTSKLKSNSTADAQSL 126
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGM----KQFVSEIVSMGKLRH--RNLVQL 398
GG G VY G+ S + +A+K V D SD G + E+V + K+ +++L
Sbjct: 67 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 126
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ R +L+ + P D + R +L V + + H
Sbjct: 127 LDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CG 182
Query: 459 VLHRDIKPANVLLDADL-EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR-G 516
VLHRDIK N+L+D + E KL DFG L D T+ GT Y PE +R R
Sbjct: 183 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 239
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGE 543
S V++ G+ + ++ CG P + E
Sbjct: 240 GRSAAVWSLGILLYDMVCGDIPFEHDE 266
>pdb|2YZ4|A Chain A, The Neutron Structure Of Concanavalin A At 2.2 Angstroms
Length = 237
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 16/124 (12%)
Query: 139 IFAIELDTVQSPEFNDIDGNHVGIDVNGLQSNESASARYFSDEKKEFESLVLESGKPIQI 198
I A+ELDT + + D H+GID+ ++S ++A +++GK
Sbjct: 4 IVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWN-------------MQNGKVGTA 50
Query: 199 WIDYNGQEKLVNVTLAPVPNPKPSRPLLSTSIDLSQILQDSMYVGLSAATGTRVSDYYIL 258
I YN +K ++ A V P +S +DL +L + + VGLSA+TG IL
Sbjct: 51 HIIYNSVDKRLS---AVVSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTIL 107
Query: 259 GWSF 262
WSF
Sbjct: 108 SWSF 111
>pdb|2CTV|A Chain A, High Resolution Crystallographic Studies Of Native
Concanavalin A Using Rapid Laue Data Collection Methods
And The Introduction Of A Monochromatic Large-Angle
Oscillation Technique (Lot)
pdb|1CON|A Chain A, The Refined Structure Of Cadmium Substituted Concanavalin
A At 2.0 Angstroms Resolution
pdb|5CNA|A Chain A, Refined Structure Of Concanavalin A Complexed With Alpha-
Methyl-D-Mannopyranoside At 2.0 Angstroms Resolution And
Comparison With The Saccharide-Free Structure
pdb|5CNA|B Chain B, Refined Structure Of Concanavalin A Complexed With Alpha-
Methyl-D-Mannopyranoside At 2.0 Angstroms Resolution And
Comparison With The Saccharide-Free Structure
pdb|5CNA|C Chain C, Refined Structure Of Concanavalin A Complexed With Alpha-
Methyl-D-Mannopyranoside At 2.0 Angstroms Resolution And
Comparison With The Saccharide-Free Structure
pdb|5CNA|D Chain D, Refined Structure Of Concanavalin A Complexed With Alpha-
Methyl-D-Mannopyranoside At 2.0 Angstroms Resolution And
Comparison With The Saccharide-Free Structure
pdb|1APN|A Chain A, The Crystallographic Structure Of Metal-Free Concanavalin
A At 2.5 Angstroms Resolution
pdb|1APN|B Chain B, The Crystallographic Structure Of Metal-Free Concanavalin
A At 2.5 Angstroms Resolution
pdb|1CVN|A Chain A, Concanavalin A Complexed To Trimannoside
pdb|1CVN|B Chain B, Concanavalin A Complexed To Trimannoside
pdb|1CVN|C Chain C, Concanavalin A Complexed To Trimannoside
pdb|1CVN|D Chain D, Concanavalin A Complexed To Trimannoside
pdb|1ENS|A Chain A, Crystals Of Demetallized Concanavalin A Soaked With Cobalt
Having A Cobalt Ion Bound In The S1 Site
pdb|1ENS|B Chain B, Crystals Of Demetallized Concanavalin A Soaked With Cobalt
Having A Cobalt Ion Bound In The S1 Site
pdb|1ENQ|A Chain A, Co-Crystals Of Demetallized Concanavalin A With Zinc
Having A Zinc Ion Bound In The S1 Site
pdb|1ENQ|B Chain B, Co-Crystals Of Demetallized Concanavalin A With Zinc
Having A Zinc Ion Bound In The S1 Site
pdb|1ENQ|C Chain C, Co-Crystals Of Demetallized Concanavalin A With Zinc
Having A Zinc Ion Bound In The S1 Site
pdb|1ENQ|D Chain D, Co-Crystals Of Demetallized Concanavalin A With Zinc
Having A Zinc Ion Bound In The S1 Site
pdb|1CES|A Chain A, Crystals Of Demetallized Concanavalin A Soaked With Zinc
Have A Zinc Ion Bound In The S1 Site
pdb|1CES|B Chain B, Crystals Of Demetallized Concanavalin A Soaked With Zinc
Have A Zinc Ion Bound In The S1 Site
pdb|1VAL|A Chain A, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Glucopyranoside
pdb|1VAL|B Chain B, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Glucopyranoside
pdb|1VAL|C Chain C, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Glucopyranoside
pdb|1VAL|D Chain D, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Glucopyranoside
pdb|1VAM|A Chain A, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Mannopyranoside
pdb|1VAM|B Chain B, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Mannopyranoside
pdb|1VAM|C Chain C, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Mannopyranoside
pdb|1VAM|D Chain D, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Mannopyranoside
pdb|1VLN|A Chain A, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|B Chain B, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|C Chain C, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|D Chain D, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|E Chain E, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|F Chain F, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|G Chain G, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|H Chain H, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1GIC|A Chain A, Concanavalin A Complexed With Methyl
Alpha-d-glucopyranoside
pdb|1GIC|B Chain B, Concanavalin A Complexed With Methyl
Alpha-d-glucopyranoside
pdb|1TEI|A Chain A, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|B Chain B, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|C Chain C, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|D Chain D, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|E Chain E, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|F Chain F, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|G Chain G, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|H Chain H, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1ONA|A Chain A, Co-Crystals Of Concanavalin A With
Methyl-3,6-Di-O-(Alpha-D-
Mannopyranosyl)-Alpha-D-Mannopyranoside
pdb|1ONA|B Chain B, Co-Crystals Of Concanavalin A With
Methyl-3,6-Di-O-(Alpha-D-
Mannopyranosyl)-Alpha-D-Mannopyranoside
pdb|1ONA|C Chain C, Co-Crystals Of Concanavalin A With
Methyl-3,6-Di-O-(Alpha-D-
Mannopyranosyl)-Alpha-D-Mannopyranoside
pdb|1ONA|D Chain D, Co-Crystals Of Concanavalin A With
Methyl-3,6-Di-O-(Alpha-D-
Mannopyranosyl)-Alpha-D-Mannopyranoside
pdb|1CJP|A Chain A, Concanavalin A Complex With 4'-Methylumbelliferyl-Alpha-D-
Glucopyranoside
pdb|1CJP|B Chain B, Concanavalin A Complex With 4'-Methylumbelliferyl-Alpha-D-
Glucopyranoside
pdb|1CJP|C Chain C, Concanavalin A Complex With 4'-Methylumbelliferyl-Alpha-D-
Glucopyranoside
pdb|1CJP|D Chain D, Concanavalin A Complex With 4'-Methylumbelliferyl-Alpha-D-
Glucopyranoside
pdb|1BXH|A Chain A, Concanavalin A Complexed To Methyl Alpha1-2 Mannobioside
pdb|1BXH|B Chain B, Concanavalin A Complexed To Methyl Alpha1-2 Mannobioside
pdb|1BXH|C Chain C, Concanavalin A Complexed To Methyl Alpha1-2 Mannobioside
pdb|1BXH|D Chain D, Concanavalin A Complexed To Methyl Alpha1-2 Mannobioside
pdb|1QGL|A Chain A, Room Temperature Structure Of Concanavalin A Complexed To
Bivalent Ligand
pdb|1QGL|B Chain B, Room Temperature Structure Of Concanavalin A Complexed To
Bivalent Ligand
pdb|1QDC|A Chain A, Man(aplha1-6)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDC|B Chain B, Man(aplha1-6)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDC|C Chain C, Man(aplha1-6)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDC|D Chain D, Man(aplha1-6)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDO|A Chain A, Man(aplha1-3)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDO|B Chain B, Man(aplha1-3)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDO|C Chain C, Man(aplha1-3)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDO|D Chain D, Man(aplha1-3)man(alpha1-o)methyl Concanavalin A Complex
pdb|1DQ0|A Chain A, Locked, Metal-Free Concanavalin A, A Minor Species In
Solution
pdb|1DQ1|A Chain A, Calcium;calcium Concanavalin A
pdb|1DQ2|A Chain A, Unlocked Metal-Free Concanavalin A
pdb|1DQ2|B Chain B, Unlocked Metal-Free Concanavalin A
pdb|1DQ4|A Chain A, A Transient Unlocked Concanavalin A Structure With Mn2+
Bound In The Transition Metal Ion Binding Site S1 And An
Empty Calcium Binding Site S2
pdb|1DQ4|B Chain B, A Transient Unlocked Concanavalin A Structure With Mn2+
Bound In The Transition Metal Ion Binding Site S1 And An
Empty Calcium Binding Site S2
pdb|1DQ5|A Chain A, Manganese;manganese Concanavalin A At Ph 5.0
pdb|1DQ6|A Chain A, Manganese;manganese Concanavalin A At Ph 7.0
pdb|1QNY|A Chain A, X-Ray Refinement Of D2o Soaked Crystal Of Concanavalin A
pdb|1C57|A Chain A, Direct Determination Of The Positions Of Deuterium Atoms
Of Bound Water In Concanavalin A By Neutron Laue
Crystallography
pdb|3ENR|A Chain A, Zinc-Calcium Concanavalin A At Ph 6.15
pdb|3ENR|B Chain B, Zinc-Calcium Concanavalin A At Ph 6.15
pdb|1I3H|A Chain A, Concanavalin A-Dimannose Structure
pdb|1GKB|A Chain A, Concanavalin A, New Crystal Form
pdb|1GKB|B Chain B, Concanavalin A, New Crystal Form
pdb|1JW6|A Chain A, Crystal Structure Of The Complex Of Concanavalin A And
Hexapeptide
pdb|1JOJ|A Chain A, Concanavalin A-Hexapeptide Complex
pdb|1JOJ|B Chain B, Concanavalin A-Hexapeptide Complex
pdb|1JOJ|C Chain C, Concanavalin A-Hexapeptide Complex
pdb|1JOJ|D Chain D, Concanavalin A-Hexapeptide Complex
pdb|1JUI|A Chain A, Concanavalin A-Carbohydrate Mimicking 10-Mer Peptide
Complex
pdb|1JUI|B Chain B, Concanavalin A-Carbohydrate Mimicking 10-Mer Peptide
Complex
pdb|1JUI|C Chain C, Concanavalin A-Carbohydrate Mimicking 10-Mer Peptide
Complex
pdb|1JUI|D Chain D, Concanavalin A-Carbohydrate Mimicking 10-Mer Peptide
Complex
pdb|1JYC|A Chain A, Concanavalin A15-Mer Peptide Complex
pdb|1JYC|B Chain B, Concanavalin A15-Mer Peptide Complex
pdb|1JYC|C Chain C, Concanavalin A15-Mer Peptide Complex
pdb|1JYC|D Chain D, Concanavalin A15-Mer Peptide Complex
pdb|1JYI|A Chain A, Concanavalin A/12-mer Peptide Complex
pdb|1JYI|B Chain B, Concanavalin A/12-mer Peptide Complex
pdb|1JYI|C Chain C, Concanavalin A/12-mer Peptide Complex
pdb|1JYI|D Chain D, Concanavalin A/12-mer Peptide Complex
pdb|1JN2|P Chain P, Crystal Structure Of Meso-Tetrasulphonatophenyl Porphyrin
Complexed With Concanavalin A
pdb|1HQW|A Chain A, Crystal Structure Of The Complex Of Concanavalin A With A
Tripeptide Ypy
pdb|1NXD|1 Chain 1, Crystal Structure Of Mnmn Concanavalin A
pdb|1NXD|2 Chain 2, Crystal Structure Of Mnmn Concanavalin A
pdb|1NXD|3 Chain 3, Crystal Structure Of Mnmn Concanavalin A
pdb|1NXD|4 Chain 4, Crystal Structure Of Mnmn Concanavalin A
pdb|1XQN|A Chain A, The 15k Neutron Structure Of Saccharide-Free Concanavalin
A
pdb|2A7A|A Chain A, On The Routine Use Of Soft X-Rays In Macromolecular
Crystallography, Part Iii- The Optimal Data Collection
Wavelength
pdb|2G4I|A Chain A, Anomalous Substructure Of Concanavalin A
pdb|1ENR|A Chain A, Co-Crystals Of Demetallized Concanavalin A With Zinc And
Calcium Having A Zinc Ion Bound In The S1 Site And A
Calcium Ion Bound In The S2 Site
pdb|1JBC|A Chain A, Concanavalin A
pdb|1NLS|A Chain A, Concanavalin A And Its Bound Solvent At 0.94a Resolution
pdb|1SCR|A Chain A, High-Resolution Structures Of Single-Metal-Substituted
Concanavalin A: The Co,Ca-Protein At 1.6 Angstroms And
The Ni,Ca-Protein At 2.0 Angstroms
pdb|1SCS|A Chain A, High-Resolution Structures Of Single-Metal-Substituted
Concanavalin A: The Co,Ca-Protein At 1.6 Angstroms And
The Ni,Ca-Protein At 2.0 Angstroms
pdb|2ENR|A Chain A, Co-crystals Of Demetallized Concanavalin A With Cadmium
Having A Cadmium Ion Bound In Both The S1 Site And The
S2 Site
pdb|2UU8|A Chain A, X-Ray Structure Of Ni, Ca Concanavalin A At Ultra-High
Resolution (0.94a)
pdb|3D4K|A Chain A, Concanavalin A Complexed To A Synthetic Analog Of The
Trimannoside
pdb|3D4K|B Chain B, Concanavalin A Complexed To A Synthetic Analog Of The
Trimannoside
pdb|3D4K|C Chain C, Concanavalin A Complexed To A Synthetic Analog Of The
Trimannoside
pdb|3D4K|D Chain D, Concanavalin A Complexed To A Synthetic Analog Of The
Trimannoside
pdb|3NWK|A Chain A, A Second C2221 Form Of Concanavalin A (Canavalia
Ensiformis)
pdb|3NWK|B Chain B, A Second C2221 Form Of Concanavalin A (Canavalia
Ensiformis)
pdb|3NWK|C Chain C, A Second C2221 Form Of Concanavalin A (Canavalia
Ensiformis)
pdb|3NWK|D Chain D, A Second C2221 Form Of Concanavalin A (Canavalia
Ensiformis)
pdb|3QLQ|A Chain A, Crystal Structure Of Concanavalin A Bound To An
Octa-Alpha-Mannosyl- Octasilsesquioxane Cluster
pdb|3QLQ|B Chain B, Crystal Structure Of Concanavalin A Bound To An
Octa-Alpha-Mannosyl- Octasilsesquioxane Cluster
pdb|3QLQ|C Chain C, Crystal Structure Of Concanavalin A Bound To An
Octa-Alpha-Mannosyl- Octasilsesquioxane Cluster
pdb|3QLQ|D Chain D, Crystal Structure Of Concanavalin A Bound To An
Octa-Alpha-Mannosyl- Octasilsesquioxane Cluster
Length = 237
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 16/124 (12%)
Query: 139 IFAIELDTVQSPEFNDIDGNHVGIDVNGLQSNESASARYFSDEKKEFESLVLESGKPIQI 198
I A+ELDT + + D H+GID+ ++S ++A +++GK
Sbjct: 4 IVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWN-------------MQNGKVGTA 50
Query: 199 WIDYNGQEKLVNVTLAPVPNPKPSRPLLSTSIDLSQILQDSMYVGLSAATGTRVSDYYIL 258
I YN +K ++ A V P +S +DL +L + + VGLSA+TG IL
Sbjct: 51 HIIYNSVDKRLS---AVVSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTIL 107
Query: 259 GWSF 262
WSF
Sbjct: 108 SWSF 111
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 347 GGSGKVYRGVLPSSHAEIAVKKVCHD--SDHGM----KQFVSEIVSMGKLRH--RNLVQL 398
GG G VY G+ S + +A+K V D SD G + E+V + K+ +++L
Sbjct: 19 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 78
Query: 399 RGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEWEQV 458
+ R +L+ + M D + R +L V + + H
Sbjct: 79 LDWFERPDSFVLILERM-EPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CG 134
Query: 459 VLHRDIKPANVLLDADL-EGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNGR-G 516
VLHRDIK N+L+D + E KL DFG L D T+ GT Y PE +R R
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 191
Query: 517 TTSTDVYAFGVFMLEVACGRRPVQPGE 543
S V++ G+ + ++ CG P + E
Sbjct: 192 GRSAAVWSLGILLYDMVCGDIPFEHDE 218
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 26/169 (15%)
Query: 382 SEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQ 436
+EI + KL H +++++ + + + +V + M G L + N R L ++Q
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 247
Query: 437 RFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEG---KLGDFGLARLYDHGND 493
+ + YLHE ++HRD+KP NVLL + E K+ DFG +++ +
Sbjct: 248 -------MLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 297
Query: 494 LHTTNVVGTVGYLAPELLRNGRGTT----STDVYAFGVFMLEVACGRRP 538
+ T + GT YLAPE+L + GT + D ++ GV + G P
Sbjct: 298 MRT--LCGTPTYLAPEVLVSV-GTAGYNRAVDCWSLGVILFICLSGYPP 343
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 26/169 (15%)
Query: 382 SEIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTR-----PSLNWFQ 436
+EI + KL H +++++ + + + +V + M G L + N R L ++Q
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 261
Query: 437 RFRIIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDADLEG---KLGDFGLARLYDHGND 493
+ + YLHE ++HRD+KP NVLL + E K+ DFG +++ +
Sbjct: 262 -------MLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 311
Query: 494 LHTTNVVGTVGYLAPELLRNGRGTT----STDVYAFGVFMLEVACGRRP 538
+ T + GT YLAPE+L + GT + D ++ GV + G P
Sbjct: 312 MRT--LCGTPTYLAPEVLVSV-GTAGYNRAVDCWSLGVILFICLSGYPP 357
>pdb|1LGB|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
Length = 181
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 17/116 (14%)
Query: 104 GMAFFISPSTDFSEAVAGSHLGIFNRSNNGQFTNHIFAIELDTVQSPEFNDIDGN-HVGI 162
G FFI+P D G +LG+FN S + T+ A+E DT + ++ +G+ H+GI
Sbjct: 82 GFTFFIAP-VDTKPQTGGGYLGVFN-SKDYDKTSQTVAVEFDTFYNTAWDPSNGDRHIGI 139
Query: 163 DVNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWIDYNGQEKLVNVTLAPVPN 218
DVN ++S + +S L++GK + I +NG ++ V+L PN
Sbjct: 140 DVNSIKSINT-------------KSWALQNGKEANVVIAFNGATNVLTVSLT-YPN 181
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 383 EIVSMGKLRHRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIK 442
E+ + ++ H N++ L + +++L+ + + G L L + SL+ + IK
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQ--KESLSEEEATSFIK 122
Query: 443 GVAFGLLYLHEEWEQVVLHRDIKPANV-LLDADL---EGKLGDFGLARLYDHGNDLHTTN 498
+ G+ YLH + + H D+KP N+ LLD ++ KL DFGLA + G + N
Sbjct: 123 QILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KN 177
Query: 499 VVGTVGYLAPELLRNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ GT ++APE++ D+++ GV + G P
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 97/234 (41%), Gaps = 42/234 (17%)
Query: 333 PHRFSYKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDSDH--GMKQFVSEIVSMGKL 390
P R+ ++L G G V +A+KK+ + K+ + EI + +L
Sbjct: 52 PDRYEIRHLIGT--GSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL 109
Query: 391 RHRNLVQLRGYCRRKG-----ELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVA 445
H ++V++ K EL +V + + + K+ T L ++ +
Sbjct: 110 NHDHVVKVLDIVIPKDVEKFDELYVVLE-IADSDFKKLF--RTPVYLTELHIKTLLYNLL 166
Query: 446 FGLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDH---GNDL-------- 494
G+ Y+H +LHRD+KPAN L++ D K+ DFGLAR D+ GN
Sbjct: 167 VGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPRED 223
Query: 495 --------HTTNV-------VGTVGYLAPEL-LRNGRGTTSTDVYAFGVFMLEV 532
HT N+ V T Y APEL L T + DV++ G E+
Sbjct: 224 DMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL 277
>pdb|1LGC|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
pdb|1LGC|C Chain C, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
pdb|1LGC|E Chain E, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
Length = 181
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 17/116 (14%)
Query: 104 GMAFFISPSTDFSEAVAGSHLGIFNRSNNGQFTNHIFAIELDTVQSPEFNDIDGN-HVGI 162
G FFI+P D G +LG+FN S + T+ A+E DT + ++ +G+ H+GI
Sbjct: 82 GFTFFIAP-VDTKPQTGGGYLGVFN-SKDYDKTSQTVAVEFDTFYNTAWDPSNGDRHIGI 139
Query: 163 DVNGLQSNESASARYFSDEKKEFESLVLESGKPIQIWIDYNGQEKLVNVTLAPVPN 218
DVN ++S + S + L++GK + I +NG ++ V+L PN
Sbjct: 140 DVNSIKSINTKSWK-------------LQNGKEANVVIAFNGATNVLTVSLT-YPN 181
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L + L +V +Y+ G + L R S RF + + YLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 180
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+L+D ++ DFG A+ T + GT YLAPE++ +
Sbjct: 181 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA----TWTLCGTPEYLAPEIILSK 234
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 22/214 (10%)
Query: 337 SYKNLYKATKGGSGKVYRGV-LPSSHA---EIAVKKVCH-DSDHGMKQFVSEIVSMGKLR 391
+K + + G G VY+G+ +P +A+K++ S K+ + E M +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 392 HRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSN-----TRPSLNWFQRFRIIKGVAF 446
+ ++ +L G C + L+ MP G L + + ++ LNW + +A
Sbjct: 83 NPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 135
Query: 447 GLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLY-DHGNDLHTTNVVGTVGY 505
G+ YL + + ++HRD+ NVL+ K+ DFGLA+L + H + +
Sbjct: 136 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 506 LAPELLRNGRGTTSTDVYAFGVFMLEVAC-GRRP 538
+A E + + T +DV+++GV + E+ G +P
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 104/231 (45%), Gaps = 22/231 (9%)
Query: 338 YKNLYKATKGGSGKVYRGVLPSSHAEIAVKKVCHDS--DHGMKQFVSEIVSMGKLRHRNL 395
Y L + GGS KV++ VL A+K V + + + + +EI + KL+ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 396 VQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEEW 455
+R Y + +Y M G++D + + S++ ++R K + + +H+
Sbjct: 117 KIIRLYDYEITDQY-IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 175
Query: 456 EQVVLHRDIKPANVLLDADLEGKLGDFGLA-RLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
++H D+KPAN L+ D KL DFG+A ++ + + VG V Y+ PE +++
Sbjct: 176 ---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDM 231
Query: 515 RGTTST-----------DVYAFGVFMLEVACGRRPVQP--GELDLLDWVID 552
+ DV++ G + + G+ P Q ++ L +ID
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 282
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L + L +V +Y+ G + L R S RF + + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 159
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+L+D ++ DFG A+ T + GT YLAPE++ +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSK 213
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 22/214 (10%)
Query: 337 SYKNLYKATKGGSGKVYRGV-LPSSHA---EIAVKKVCH-DSDHGMKQFVSEIVSMGKLR 391
+K + + G G VY+G+ +P +A+K++ S K+ + E M +
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 392 HRNLVQLRGYCRRKGELLLVYDYMPNGSLDKILYSN-----TRPSLNWFQRFRIIKGVAF 446
+ ++ +L G C + L+ MP G L + + ++ LNW + +A
Sbjct: 76 NPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 128
Query: 447 GLLYLHEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLY-DHGNDLHTTNVVGTVGY 505
G+ YL + + ++HRD+ NVL+ K+ DFGLA+L + H + +
Sbjct: 129 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 506 LAPELLRNGRGTTSTDVYAFGVFMLEVAC-GRRP 538
+A E + + T +DV+++GV + E+ G +P
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQ---RFRIIKGVAFGLLYL 451
LV+L + L +V +Y+ G + +S+ R + + RF + + YL
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFEYL 157
Query: 452 HEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL 511
H +++RD+KP N+L+D ++ DFG A+ T + GT YLAPE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEII 210
Query: 512 RNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ + D +A GV + E+A G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L + L +V +Y+ G + L R S RF + + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 159
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+L+D ++ DFG A+ T + GT YLAPE++ +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSK 213
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQ---RFRIIKGVAFGLLYL 451
LV+L + L +V +Y+ G + +S+ R + + RF + + YL
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFEYL 178
Query: 452 HEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL 511
H +++RD+KP N+L+D ++ DFG A+ T + GT YLAPE++
Sbjct: 179 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEII 231
Query: 512 RNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ + D +A GV + E+A G P
Sbjct: 232 LSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQ---RFRIIKGVAFGLLYL 451
LV+L + L +V +Y+ G + +S+ R + + RF + + YL
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFEYL 157
Query: 452 HEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL 511
H +++RD+KP N+L+D ++ DFG A+ T + GT YLAPE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEII 210
Query: 512 RNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ + D +A GV + E+A G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 27/123 (21%)
Query: 440 IIKGVAFGLLYLHEEWEQVVLHRDIKPANVLLDA-------------DLEGKLGDFGLAR 486
+++ +A G+ +LH ++HRD+KP N+L+ +L + DFGL +
Sbjct: 120 LLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 487 LYDHGNDLHTTNV---VGTVGYLAPELLRNG-------RGTTSTDVYAFG-VFMLEVACG 535
D G TN+ GT G+ APELL R T S D+++ G VF ++ G
Sbjct: 177 KLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236
Query: 536 RRP 538
+ P
Sbjct: 237 KHP 239
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 9/144 (6%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQRFRIIKGVAFGLLYLHEE 454
LV+L + L +V +Y+ G + L R S RF + + YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPHARFYAAQ-IVLTFEYLHS- 160
Query: 455 WEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELLRNG 514
+++RD+KP N+L+D ++ DFG A+ T + GT YLAPE++ +
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSK 214
Query: 515 RGTTSTDVYAFGVFMLEVACGRRP 538
+ D +A GV + E+A G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 395 LVQLRGYCRRKGELLLVYDYMPNGSLDKILYSNTRPSLNWFQ---RFRIIKGVAFGLLYL 451
LV+L + L +V +Y+ G + +S+ R + + RF + + YL
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFEYL 157
Query: 452 HEEWEQVVLHRDIKPANVLLDADLEGKLGDFGLARLYDHGNDLHTTNVVGTVGYLAPELL 511
H +++RD+KP N+L+D ++ DFG A+ T + GT YLAPE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEII 210
Query: 512 RNGRGTTSTDVYAFGVFMLEVACGRRP 538
+ + D +A GV + E+A G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,489,185
Number of Sequences: 62578
Number of extensions: 763252
Number of successful extensions: 4138
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 331
Number of HSP's that attempted gapping in prelim test: 1725
Number of HSP's gapped (non-prelim): 1260
length of query: 660
length of database: 14,973,337
effective HSP length: 105
effective length of query: 555
effective length of database: 8,402,647
effective search space: 4663469085
effective search space used: 4663469085
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)