Query 006113
Match_columns 660
No_of_seqs 146 out of 710
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 16:17:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006113.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006113hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ksi_A Copper amine oxidase; P 100.0 1E-190 4E-195 1604.9 71.2 633 25-659 2-634 (642)
2 3sxx_A Peroxisomal primary ami 100.0 1E-190 5E-195 1602.2 69.9 631 14-659 11-660 (692)
3 3loy_A Copper amine oxidase; T 100.0 9E-188 3E-192 1571.3 70.1 614 25-660 1-633 (633)
4 1w6g_A Phenylethylamine oxidas 100.0 2E-184 5E-189 1551.7 65.0 612 23-659 5-626 (646)
5 1spu_A Copper amine oxidase; o 100.0 7E-181 2E-185 1546.8 68.6 622 22-659 90-725 (727)
6 1tu5_A Copper amine oxidase, l 100.0 3E-164 9E-169 1402.4 56.3 607 24-659 39-705 (746)
7 1w7c_A Lysyl oxidase; AMNE oxi 100.0 9E-164 3E-168 1396.1 59.6 605 22-659 15-692 (747)
8 3hi7_A Amiloride-sensitive ami 100.0 1E-155 5E-160 1324.3 63.5 609 25-659 10-693 (731)
9 3pgb_A Putative uncharacterize 100.0 2E-153 6E-158 1308.5 62.1 610 20-659 60-736 (797)
10 2d0s_A Cytochrome C, cytochrom 21.4 54 0.0018 25.7 2.7 19 27-45 59-77 (79)
11 2cs7_A Pneumococcal histidine 20.4 35 0.0012 26.7 1.2 18 27-44 37-54 (55)
No 1
>1ksi_A Copper amine oxidase; PEA seedling, oxidoreductase; HET: TPQ NAG; 2.20A {Pisum sativum} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 PDB: 1w2z_A*
Probab=100.00 E-value=1e-190 Score=1604.91 Aligned_cols=633 Identities=56% Similarity=1.016 Sum_probs=596.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhCCCCCCceEEEEEEccCCChHhhHhhhhcCCCCCCCCEeEEEEEeCCeeEEEEEECCC
Q 006113 25 YHPLDSLTPSEFTQIQSIVTKAYPKSTYNLTFQYVGLKEPTKQTVLSWLRNETTTNPPRQAFVVARIDHQTHEIIVDLSL 104 (660)
Q Consensus 25 ~HPLdpLs~~Ei~~a~~~l~~~~~~~~~~~~f~~I~L~EP~K~~vl~~l~~~~~~~p~R~A~vv~~~~~~~~E~iV~L~~ 104 (660)
+|||||||++||++|++||+++...++.+++|.+|+|+||+|++|++||+..+.++|+|+|+|+++.+++++|++|+|+.
T Consensus 2 ~HPldpLs~~Ei~~a~~iv~~~~~~~~~~~~F~~i~L~EP~K~~v~~~l~~~~~~~P~R~A~vv~~~~~~~~E~vV~L~~ 81 (642)
T 1ksi_A 2 QHPLDPLTKEEFLAVQTIVQNKYPISNNRLAFHYIGLDDPEKDHVLRYETHPTLVSIPRKIFVVAIINSQTHEILINLRI 81 (642)
T ss_dssp CSTTCCCCHHHHHHHHHHHHHHSCTTTCCEEEEEEEECCCCHHHHHHHHHCGGGCCCCCEEEEEEEETTEEEEEEEETTT
T ss_pred CCCCCCCCHHHHHHHHHHHHhcccCCCCceEEEEEECCCCCHHHHHHHHhhcCCCCCCcEEEEEEEeCCeEEEEEEECCC
Confidence 59999999999999999999988654568899999999999999999985433456899999999999999999999999
Q ss_pred CeEEEEeeeCCCCCCCCCHHHHHHHHHHHhcChHHHHHHHhcCCCCCceEEccccccccCCCCCceeEEEEEEEEecCCC
Q 006113 105 QGITSKKTYNGYGYPLLTGEEQEDANKLASTYPLFVASISKRGLKLEEVVCGSFTVGWFGEERKNKRIVKMMCYYLDGTL 184 (660)
Q Consensus 105 ~~v~~~~~~~~~~~p~~~~eE~~~~e~~~~~~p~~~~a~~~~Gi~~~~v~~d~w~~G~~~~~~~~rRl~~~~~~~r~~~~ 184 (660)
+++++++..+..+||+++.|||.++++++++||.|+++|++|||++..|+|+||++|++|..+ +||++|++||++.+++
T Consensus 82 ~~v~~~~~~~~~g~p~~~~~E~~~~e~~~~~~p~~~~~~~~~gl~~~~v~~~pw~~g~~~~~~-~~Rl~~~~~~~~~~~~ 160 (642)
T 1ksi_A 82 RSIVSDNIHNGYGFPILSVDEQSLAIKLPLKYPPFIDSVKKRGLNLSEIVCSSFTMGWFGEEK-NVRTVRLDCFMKESTV 160 (642)
T ss_dssp TEEEEEEECCSSCBCCCCHHHHHHHTTGGGGCHHHHHHHHHTTCCGGGEEEEEECCCCCSCSC-CCCEEEEEEEECSSCS
T ss_pred CcEEEEEeccCCCcCCCCHHHHHHHHHHhhcCHHHHHHHHhcCCCccceEEecccccCCCCCC-CcEEEEEEEEEecCCC
Confidence 999887666655699999999999999999999999999999999889999999999988753 6999999999998889
Q ss_pred CcccccCCCeEEEEeCCCcEEEEEeCCceeeCCCCCCCCCccCcCCCCCCCCCCCceeeCCCCCeeEEeccEEeeeceEE
Q 006113 185 NADMRPIEGITMTVDLDEMKIIQFRDRIIVPVPKSDGTEYRESKLKPPFRPSLKRTTVVQPDGPSFNIVGSQIRWADWEF 264 (660)
Q Consensus 185 n~YahPl~gl~~~vD~~~~~vv~i~d~~~~~~p~~~~~~y~~~~~~~~~r~~lkp~~i~QPeG~sf~v~g~~V~W~~W~f 264 (660)
|+||||||||+++||++++||++|+|.+.+++|+.++.+|++..+.+++|+++|||+|+||||+||+|+|++|+||||+|
T Consensus 161 n~Ya~Pl~Gl~~vvD~~~~~V~~i~d~~~~~~p~~~~~~y~~~~~~~~~r~~lkP~~i~QPeG~sF~V~G~~V~W~~W~f 240 (642)
T 1ksi_A 161 NIYVRPITGITIVADLDLMKIVEYHDRDIEAVPTAENTEYQVSKQSPPFGPKQHSLTSHQPQGPGFQINGHSVSWANWKF 240 (642)
T ss_dssp CGGGSEECSEEEEEETTTTEEEEEEECCCCCCCCCTTCCCCSTTCCSCCCCCCCCBEEECTTCCSCEEETTEEEETTEEE
T ss_pred cccccccCceEEEEECCCCEEEEEEccCCccCCCCCCCCccccccCCCCCCCCCCceecCCCCCCEEEeCcEEeeCCceE
Confidence 99999999999999999999999998877788877777899887766779999999999999999999999999999999
Q ss_pred EEeecCCCceeEEeeEEeCCCCCcceEEEEeeeeeeEEeecCCCCcccccceeeecCCCCCCcCCCCCCCCCCCCCCcEE
Q 006113 265 HLSFDARAGMIISVASIYDPEKQQSRQVLYKGHVSELFVPYMDLTEEWYYRSFFDVGEYGYGLSSLPLEPLRDCPPNAVF 344 (660)
Q Consensus 265 ~~gf~~reGlvL~~v~~~D~~~~~~r~I~yrlsl~Em~vpYgdp~~~~~~k~~fD~geyG~G~~a~~L~~G~DCpg~~~Y 344 (660)
|||||+|||||||||+|+|.++|++|||+||+|||||+||||||+++|++|+|||+||||+|.+||+|++||||||+|+|
T Consensus 241 ~vgf~~reGlvL~dv~y~d~~~g~~r~V~YrlSl~Em~VPYgdP~~~~~~k~~fD~GeyG~G~~a~~L~~GcDCpg~i~Y 320 (642)
T 1ksi_A 241 HIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQDPTEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQF 320 (642)
T ss_dssp EEEEETTTEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEBCCCSTTTTTCEECHHHHHCTTTTBCCCCBTTTBCTTCEE
T ss_pred EEecCCCcccEEEEEEEecCCCCCceEEEEEeeeeeEEEeCCCCCcccccceeeeccccCccccccccccCCCCCCCCEE
Confidence 99999999999999999998878899999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEecCCCceeEecceEEEeEeeCCCceeccccCCCCcceEeeeeeceEEEEEEeeeeccccceEEEEEeeCccEEEE
Q 006113 345 MDAYFAKNDGMPLKMPNVFCIFERYAGDVMWRHTEATDPEKLIREVRPEVSLVVRTVSTVGNYDYINDWEFKQSGSIKVT 424 (660)
Q Consensus 345 lD~~~~~~~g~p~~~~naiCi~E~d~~g~l~kH~~~~~~~~~~~~~r~~~~LVvr~i~TVgNYdY~~~w~F~~DGtIe~e 424 (660)
||+++.+++|+|++++|||||||+| +||||||+++++++..++++||+++||||+|+|||||||||+|+|||||+||+|
T Consensus 321 ~D~~~~~~~G~p~~~~naiCihE~d-~gilwkH~~~r~~~~~~~~v~r~r~LVvr~i~TV~NYdYif~w~F~qdG~Ie~e 399 (642)
T 1ksi_A 321 IDTYVHSANGTPILLKNAICVFEQY-GNIMWRHTENGIPNESIEESRTEVNLIVRTIVTVGNADNVIDWEFKASGSIKPS 399 (642)
T ss_dssp EEEEEECTTCCEEEEEEEEEEEEEE-EEEEEEEEECCSTTCCEEEEEEEEEEEEEEEEEETTEEEEEEEEECTTSCEEEE
T ss_pred eeeEEecCCCCEEEcCCEEEEEecc-CCcceeeccccCCCceeeeeeeccEEEEEEEEeecccceEEEEEEecCceEEEE
Confidence 9999999999999999999999999 999999999998765456677788999999999999999999999999999999
Q ss_pred EeEeeeeeeeeccccCCCCcccccccceeccCcccccceeeEEeeeecCCCCCCCceEEEEEEEeecCCCCCCcceeEEE
Q 006113 425 VGLTGMLEVRGTNYTHKDQIEEDVYGTLIAENTIGVRHDHFLTYRLDLDVDGDANSFVKSKLRTVRVNDHGSPRKSYWTV 504 (660)
Q Consensus 425 v~aTGil~~~~~~~~~~~~~~~~~yGt~V~~~~~~~~HqH~f~~RlD~dIdG~~Nsv~~~d~v~~~~~~~~np~~~~~~~ 504 (660)
|||||||+|+++.+...+++.+.+|||+|+|+++|++|||+|||||||||||.+|||+++|+++++.+.++||++++|++
T Consensus 400 v~aTGil~t~~~~~~~~~~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~~~~~~~~~~~~np~~~~~~~ 479 (642)
T 1ksi_A 400 IALSGILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHFYIYYLDFDIDGTHNSFEKTSLKTVRIKDGSSKRKSYWTT 479 (642)
T ss_dssp EEEEECCCEEECSCCSGGGCCSCCSEEEEETTEEEECEEEEEEEEEEECTTSSCBEEEEEEEEEEECCSSCSSCSEEEEE
T ss_pred EEEEEEEEecccccccccccccCCCcceecCCcccccceEEEEEeeccCCCCCCCeEEEEeeEecCCCCCCCCCcceEEE
Confidence 99999999988765432222246899999999999999999999999999999999999999999987679999999999
Q ss_pred EEEEeechhhHhhhcCCCCcEEEEecCCCCCCCCCceeEEEeeCCCcCcCCCCCChhhhcccccccceEEeeecCCccCC
Q 006113 505 DRETARTESAARIKLGSEPVDLLFVNPNKKTKMGNLIGYRLVPYGVVGPLLSDDDYPQIRAAFTNYNAWVTAYNISEKWA 584 (660)
Q Consensus 505 ~~~~l~tE~~a~~~~~~~~r~~~ivN~~~~N~~G~p~gY~l~p~~~~~~~~~~~s~~~~ra~fa~~~lwVT~y~~~E~~a 584 (660)
++++++||++|+++++..+|+|+|+|++++|++|+|+||||+|+++++++++++|+..+||+||+|+||||||+|+|+||
T Consensus 480 ~~t~~~tE~ea~~~~~~~~r~~~i~N~~~~N~~G~p~gYkl~p~~~~~~l~~~~s~~~~Ra~fa~~~lwVT~y~d~E~~a 559 (642)
T 1ksi_A 480 ETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLIPAIPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWA 559 (642)
T ss_dssp EEEECCBGGGGCBCTTSSCEEEEEEEEEEECTTSCEEEEEEECCSCCCCCSCTTSHHHHHTGGGGCSEEEEECCTTCCCT
T ss_pred EEEEccchhhhhhccCCCceEEEEEcCCCcCCCCCeeeEEEccCCcccccCCCcchhhhhhhccccceEEecCCCCccCC
Confidence 99999999999999998899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCCCCCChhhhccCCCceecCCeEEEEEecceeCCCCCCCCCcccccceeEEEeCCCCCCCCCCCCCCC
Q 006113 585 GGLYADQSRGDDTLSVWSKRNRSIENKDIVLWYTLGFHHVPCQEDFPVMPTFNGGFELRPSNFFESNPVLKVVPP 659 (660)
Q Consensus 585 sg~y~~q~~~~~~l~~~~~~~e~i~~~DlV~W~t~G~~HvPr~ED~Pvmp~~~~~f~L~P~nFFd~nP~ldvP~~ 659 (660)
||+|+||+++++|+.+|+++||+|+|||||+|||||+||+||+|||||||++++||+|||+|||++||+||||++
T Consensus 560 ~g~y~~qs~~~~gl~~~~~~~~~i~~~DiV~W~t~G~~H~Pr~ED~PvMp~~~~~f~L~P~nFF~~nP~ldvp~~ 634 (642)
T 1ksi_A 560 GGLYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIHHVPAQEDFPIMPLLSTSFELRPTNFFERNPVLKTLSP 634 (642)
T ss_dssp TCSCCBTCCSSSSHHHHGGGCCBCSSBCEEEEEEEEEEECCCGGGSSSCCCEEEECEEEESSCSSSCTTTTCCCC
T ss_pred CCCCccCCCCCCChhhhhhCCCccccCCcEEEEecccccCCChhhCCCCccceEEEEEEeCCCCCCCCCccCCCC
Confidence 999999999989999999999999999999999999999999999999999999999999999999999999987
No 2
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A*
Probab=100.00 E-value=1.4e-190 Score=1602.17 Aligned_cols=631 Identities=26% Similarity=0.441 Sum_probs=586.5
Q ss_pred hhhcccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCceEEEEEEccCCChHhhHhhhhcCCCCCCCCEeEEEEEe--
Q 006113 14 LHIFFLIPSHQYHPLDSLTPSEFTQIQSIVTKAYPKSTYNLTFQYVGLKEPTKQTVLSWLRNETTTNPPRQAFVVARI-- 91 (660)
Q Consensus 14 ~~~~~~~~~~~~HPLdpLs~~Ei~~a~~~l~~~~~~~~~~~~f~~I~L~EP~K~~vl~~l~~~~~~~p~R~A~vv~~~-- 91 (660)
....+.++...+|||||||++||++|++||+++... .+++|.+|+|.||+|++|++|+++. .+.|+|+|+|+++.
T Consensus 11 ~~~~~~~~~~~~HPLDpLs~~Ei~~a~~iv~~~~~~--~~~~F~~i~L~EP~K~~v~~~~~~~-~~~p~R~a~v~~~~~~ 87 (692)
T 3sxx_A 11 ATAASAAPARPAHPLDPLSTAEIKAATNTVKSYFAG--KKISFNTVTLREPARKAYIQWKEQG-GPLPPRLAYYVILEAG 87 (692)
T ss_dssp ----CCSCCCCSSTTSCCCHHHHHHHHHHHHHHTTT--SCEEEEEEEEECCCHHHHHHHHHSC-CCCCCCEEEEEEEETT
T ss_pred ccccCCCCCCCCCCCCCCCHHHHHHHHHHHHhhCCC--CCcEEEEEECCCCCHHHHHHHHhcC-CCCCCeEEEEEEEECC
Confidence 345566666778999999999999999999987753 6789999999999999999999874 45788999999998
Q ss_pred CCeeEEEEEECCCCeEEEEeeeCCCCCCCCCHHHHHHHHHHHhcChHHHHHHHhcCC---CCCceEEccccccccCCCCC
Q 006113 92 DHQTHEIIVDLSLQGITSKKTYNGYGYPLLTGEEQEDANKLASTYPLFVASISKRGL---KLEEVVCGSFTVGWFGEERK 168 (660)
Q Consensus 92 ~~~~~E~iV~L~~~~v~~~~~~~~~~~p~~~~eE~~~~e~~~~~~p~~~~a~~~~Gi---~~~~v~~d~w~~G~~~~~~~ 168 (660)
+++++|++|||++++|++|+.+++ .||+++.|||.+||++|++||+|+++|++||| +++.|+||||++|+++..+.
T Consensus 88 ~~~~~e~vVdl~~~~v~~~~~~~~-~~p~~~~ee~~~~e~~~~~~p~~~~a~~~rgl~~~~~~~V~~dpw~~G~~~~~~~ 166 (692)
T 3sxx_A 88 KPGVKEGLVDLASLSVIETRALET-VQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGT 166 (692)
T ss_dssp CSSEEEEEEETTTTEEEEEEEETT-CCCCCCHHHHHTHHHHHHHCHHHHHHHHHTTCCGGGGGGEEEEEEECCCCTTTTT
T ss_pred CCCEEEEEEECCCCeEEEEEECCC-CcCCcCHHHHHHHHHHHHhCHHHHHHHHHcCCCccccceEEEccccccccCCCCC
Confidence 688999999999999999999986 58999999999999999999999999999999 45679999999999886555
Q ss_pred ceeEEEEEEEEec-CCCCcccccCCCeEEEEeCCCcEEEEEeCCce-eeCCCCCCCCCccCcCC--CCCCC-CCCCceee
Q 006113 169 NKRIVKMMCYYLD-GTLNADMRPIEGITMTVDLDEMKIIQFRDRII-VPVPKSDGTEYRESKLK--PPFRP-SLKRTTVV 243 (660)
Q Consensus 169 ~rRl~~~~~~~r~-~~~n~YahPl~gl~~~vD~~~~~vv~i~d~~~-~~~p~~~~~~y~~~~~~--~~~r~-~lkp~~i~ 243 (660)
+|||+||+||+|. .++|+|||||| |.++||++++||++|++... .|+|+.+..+|+++.+. +++|+ ++|||+|+
T Consensus 167 ~~Rl~~~~~y~r~~~~~N~Ya~Pl~-~~~vvD~~~~~vi~id~~~~~~p~~~~~~~~Y~p~~~~~~~~~r~~d~kP~~i~ 245 (692)
T 3sxx_A 167 GKRLQQALVYYRSDEDDSQYSHPLD-FCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVT 245 (692)
T ss_dssp SSCEEEEEEEECSSTTSCGGGCBCS-CEEEEETTTTEEEEEECCSSCCCCCCSCCCCCSHHHHHHHHSSCCCCCCCCEEE
T ss_pred CceEEEEEEEEecCCCCCcccccce-eEEEEECCCCEEEEEecCCCCCCCCCCCCCCCChHHccccCCCCCCCCCCceec
Confidence 8999999999997 58999999999 99999999999999998765 56777777899987654 46798 99999999
Q ss_pred CCCCCeeEEeccEEeeeceEEEEeecCCCceeEEeeEEeCCCCCcceEEEEeeeeeeEEeecCCCCcccccceeeecCCC
Q 006113 244 QPDGPSFNIVGSQIRWADWEFHLSFDARAGMIISVASIYDPEKQQSRQVLYKGHVSELFVPYMDLTEEWYYRSFFDVGEY 323 (660)
Q Consensus 244 QPeG~sf~v~g~~V~W~~W~f~~gf~~reGlvL~~v~~~D~~~~~~r~I~yrlsl~Em~vpYgdp~~~~~~k~~fD~gey 323 (660)
||||+||+|+||+|+||||+||||||+|||||||||+|+| +|+.|||+||+|||||+||||||+++|++|+|||+|||
T Consensus 246 QPeG~sF~v~g~~V~W~~W~F~vgf~~reGlvL~dV~y~~--~g~~R~V~YrlSl~Em~VPYgdp~~p~~~k~afD~Gey 323 (692)
T 3sxx_A 246 QPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYND--HGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEY 323 (692)
T ss_dssp CTTCCSCEEETTEEEETTEEEEEEEETTTEEEEEEEEEEE--TTEEEEEEEEEEEEEEEEEBCCCSTTGGGCEECHHHHT
T ss_pred CCCCCcEEEcCCeEEecCcEEEEecCCCCceEEEEEEEcC--CCcceeeeeeeehheeEEecCCCCchhhhheeeecccc
Confidence 9999999999999999999999999999999999999999 67889999999999999999999999999999999999
Q ss_pred CCCcCCCCCCCCCCCCCCcEEeeeEEecCCCceeEecceEEEeEeeCCCceeccccCCCC--cceEeeeeeceEEEEEEe
Q 006113 324 GYGLSSLPLEPLRDCPPNAVFMDAYFAKNDGMPLKMPNVFCIFERYAGDVMWRHTEATDP--EKLIREVRPEVSLVVRTV 401 (660)
Q Consensus 324 G~G~~a~~L~~G~DCpg~~~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~kH~~~~~~--~~~~~~~r~~~~LVvr~i 401 (660)
|+|.+||+|++||||||+|+|||+++.+++|+|++++|||||||+| .|+||||++++++ ..+++|+| +||||+|
T Consensus 324 G~G~~an~L~lGcDCpg~i~YlD~~~~~~~G~p~~~~NaICihE~d-~Gil~kHt~~r~~~~~~~v~r~r---~LVvr~i 399 (692)
T 3sxx_A 324 GAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEED-DGLLFKHSDFRDNFATSLVTRAT---KLVVSQI 399 (692)
T ss_dssp CTTTTBCCCTTTTTSCSSCEEEEEEEECTTSCEEEEEEEEEEEEEE-EEEEEEEECGGGTTCSEEEEEEE---EEEEEEE
T ss_pred CCCccccccccCCCCCCCcEEeeeEEecCCCCEEEecceEEEeecc-CCceEEeeeccCCCceeeEEecc---EEEEEEe
Confidence 9999999999999999999999999999999999999999999999 6699999999876 55555554 9999999
Q ss_pred eeeccccceEEEEEeeCccEEEEEeEeeeeeeeeccccCCCCcccccccceeccCcccccceeeEEeeeecCCCCCCCce
Q 006113 402 STVGNYDYINDWEFKQSGSIKVTVGLTGMLEVRGTNYTHKDQIEEDVYGTLIAENTIGVRHDHFLTYRLDLDVDGDANSF 481 (660)
Q Consensus 402 ~TVgNYdY~~~w~F~~DGtIe~ev~aTGil~~~~~~~~~~~~~~~~~yGt~V~~~~~~~~HqH~f~~RlD~dIdG~~Nsv 481 (660)
+|||||||||+|+|||||+||+||||||||+++++. .++ .+.+|||+|+|+++|++|||+|||||||||||.+|||
T Consensus 400 ~TVgNYDYif~w~F~qdG~Ie~ev~aTGil~t~~~~---~~~-~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv 475 (692)
T 3sxx_A 400 FTAANYEYCLYWVFMQDGAIRLDIRLTGILNTYILG---DDE-EAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSA 475 (692)
T ss_dssp EEETTEEEEEEEEECTTSCEEEEEEEEECCCCEECC---TTC-CCTTTEEEEETTEEEECEEEEEEEEEEECTTSSCBEE
T ss_pred eeccceeEEEEEEEecCCeEEEEEEEEEEEEeeeeC---CCc-ccCCCcceecCCccccceeEEEEEEeccccCCCCceE
Confidence 999999999999999999999999999999987652 111 1468999999999999999999999999999999999
Q ss_pred EEEEEEEeecCC--CCCCcceeEEEEEEEeechhhHhhhcCC-CCcEEEEecCCCCCCC-CCceeEEEeeCCCcCcCCCC
Q 006113 482 VKSKLRTVRVND--HGSPRKSYWTVDRETARTESAARIKLGS-EPVDLLFVNPNKKTKM-GNLIGYRLVPYGVVGPLLSD 557 (660)
Q Consensus 482 ~~~d~v~~~~~~--~~np~~~~~~~~~~~l~tE~~a~~~~~~-~~r~~~ivN~~~~N~~-G~p~gY~l~p~~~~~~~~~~ 557 (660)
+++|+++++++. +.||++|+|++++++++||++|++++++ ++|+|+|+|++++|++ |+|+||||+|++++++|+.+
T Consensus 476 ~~~d~~~~~~~~~~~~np~g~~~~~~~t~~~tE~ea~~~~~~~~~R~~~i~N~~~~N~~sG~pvgYkL~p~~~~~ll~~~ 555 (692)
T 3sxx_A 476 AACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKE 555 (692)
T ss_dssp EEEEEEECSSCTTBTTBTTSCCEEEEEEECCBHHHHCBCCCGGGTCEEEEECTTCCCTTTCSCCEEEEECCCCCCCCSCT
T ss_pred EEEEeEEccCCCCCCCCCCcceeEEEEEEccchhhhhhccCCCCCcEEEEeCCCCcCCCCCccceEEEecCCCCcccCCC
Confidence 999999998863 3799999999999999999999999999 9999999999999999 99999999999999999999
Q ss_pred CChhhhcccccccceEEeeecCCccCCCCcCCCCCCCC--CChhhhc-cCCCceecCCeEEEEEecceeCCCCCCCCCcc
Q 006113 558 DDYPQIRAAFTNYNAWVTAYNISEKWAGGLYADQSRGD--DTLSVWS-KRNRSIENKDIVLWYTLGFHHVPCQEDFPVMP 634 (660)
Q Consensus 558 ~s~~~~ra~fa~~~lwVT~y~~~E~~asg~y~~q~~~~--~~l~~~~-~~~e~i~~~DlV~W~t~G~~HvPr~ED~Pvmp 634 (660)
+|+..+||+||+|+||||||+|+|+||||+|+||+.++ .||++|+ ++||+|+|||||+|+|||+||+||+|||||||
T Consensus 556 ~s~~~~ra~fa~~~lwVT~y~d~E~~aag~y~nQs~g~p~~gl~~w~~~~~e~I~n~DiV~W~t~G~~HiPr~ED~PvMP 635 (692)
T 3sxx_A 556 GSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMP 635 (692)
T ss_dssp TSHHHHHCGGGGSSEEEEECCTTCCCTTCSSCTTCCSCSSCHHHHHHTTSCSBCSSBCEEEEEEEEEEECCCGGGSSSCC
T ss_pred CchhhhhchhcccceEEecCCCCccCCCCCCccCCCCCCCCChHHHhhcCCceeecCceEEEEecCcccCCchhcCCCCc
Confidence 99999999999999999999999999999999999987 6999999 89999999999999999999999999999999
Q ss_pred cccceeEEEeCCCCCCCCCCCCCCC
Q 006113 635 TFNGGFELRPSNFFESNPVLKVVPP 659 (660)
Q Consensus 635 ~~~~~f~L~P~nFFd~nP~ldvP~~ 659 (660)
++++||+|||+||||+||+||||++
T Consensus 636 ~~~~gf~LrP~nFFd~NPaldvp~~ 660 (692)
T 3sxx_A 636 AEPITLMLRPRHFFTENPGLDIQPS 660 (692)
T ss_dssp CEEEEEEEEEESSSSSCTTTTSCCS
T ss_pred ceEEEEEEECCCcCCCCCcccCCCc
Confidence 9999999999999999999999986
No 3
>3loy_A Copper amine oxidase; TPQ, oxidoreductase; HET: TPQ TLA; 2.00A {Pichia angusta}
Probab=100.00 E-value=8.6e-188 Score=1571.25 Aligned_cols=614 Identities=26% Similarity=0.438 Sum_probs=571.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhCCCCCCceEEEEEEccCCChHhhHhhhhcC--C--CCCCCCEeEEEEEeCCeeEEEEE
Q 006113 25 YHPLDSLTPSEFTQIQSIVTKAYPKSTYNLTFQYVGLKEPTKQTVLSWLRNE--T--TTNPPRQAFVVARIDHQTHEIIV 100 (660)
Q Consensus 25 ~HPLdpLs~~Ei~~a~~~l~~~~~~~~~~~~f~~I~L~EP~K~~vl~~l~~~--~--~~~p~R~A~vv~~~~~~~~E~iV 100 (660)
.|||||||++||++|++||+++... ..+++|.+|+|.||+|++|++||+++ | .+.|+|+|+|+++.+++++|++|
T Consensus 1 ~HPLdpLs~~Ei~~a~~iv~~~~~~-~~~~~F~~i~L~EP~K~~v~~~l~~~~~g~~~~~p~R~a~v~~~~~~~~~e~vV 79 (633)
T 3loy_A 1 VHPYDPISDAELQLTSQLIKDATKG-PERPHFIQIDRLDPPKKDMIRYLEAERTGKPLPHISRMTYVYYYIGLDFYKALV 79 (633)
T ss_dssp CCTTCCCCHHHHHHHHHHHHHHCCS-SSCEEEEEEEECCCCHHHHHHHHHHHHHTCCCCCCCCEEEEEEEETTEEEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHhhccC-CCCcEEEEEECCCCCHHHHHHHHhhhhcCCCCCCCCcEEEEEEEeCCCEEEEEE
Confidence 4999999999999999999988753 25789999999999999999998752 2 35678999998877889999999
Q ss_pred ECCCCeEEEEeeeCCCCCCCCCHHHHHHHHHHHhcChHHHHHHHhcCC-CCCceEEccccccccCCCCCceeEEEEEEEE
Q 006113 101 DLSLQGITSKKTYNGYGYPLLTGEEQEDANKLASTYPLFVASISKRGL-KLEEVVCGSFTVGWFGEERKNKRIVKMMCYY 179 (660)
Q Consensus 101 ~L~~~~v~~~~~~~~~~~p~~~~eE~~~~e~~~~~~p~~~~a~~~~Gi-~~~~v~~d~w~~G~~~~~~~~rRl~~~~~~~ 179 (660)
||++++|++++.+++.+||+++.|||.+||++|++||+|+++|++||| +++.|+||||++|+.+ +++|||+||+||+
T Consensus 80 dl~~~~v~~~~~~~~~~~p~~~~~e~~~~e~~~~~~p~~~~a~~~~gl~~~~~V~~dpw~~G~d~--~~~~Rl~q~~~y~ 157 (633)
T 3loy_A 80 NVSYGHIITNQKQPKGVIGPLIAEDIQEIEELATTHPIVKAEIEKLKLPPHVRVVCDPWMNGTDS--KEDRMLIQCYMYL 157 (633)
T ss_dssp ETTTTEEEEEEECCTTCCCCCCHHHHHHHHHHHTTSHHHHHHHHTTCCCTTEEEEEEEEECCCSS--CCCSCEEEEEEEE
T ss_pred ECCCCeEEEEEecCCCccCCCCHHHHHHHHHHHHhCHHHHHHHHHcCCCCCceEEEeccccccCC--CCCcEEEEEEEEE
Confidence 999999999999998789999999999999999999999999999999 6689999999999755 4679999999999
Q ss_pred ec---CCCCcccccCCCeEEEEeCCCcEEEEEeCC--ce----e---eCCCCCCCCCccCcCCCCCCCCCCCceeeCCCC
Q 006113 180 LD---GTLNADMRPIEGITMTVDLDEMKIIQFRDR--II----V---PVPKSDGTEYRESKLKPPFRPSLKRTTVVQPDG 247 (660)
Q Consensus 180 r~---~~~n~YahPl~gl~~~vD~~~~~vv~i~d~--~~----~---~~p~~~~~~y~~~~~~~~~r~~lkp~~i~QPeG 247 (660)
|. +++|+|||||| |.++||++++||++|++. +. + |.++.+..+|+++.+.+ .|+++|||.|+||||
T Consensus 158 r~~~~~~~N~Ya~Pl~-~~~vvD~~~~~vi~id~~~~g~~~~~~~~~p~~~~~~~~Y~p~~~~~-~r~d~kp~~i~QPeG 235 (633)
T 3loy_A 158 ASAAHPESNHYSLPLK-FSPVFECLTKKFVRMDYLPGGADETVTETQAWDEFPFVEYHPDLNGE-TIVPLKPLIVQQPEG 235 (633)
T ss_dssp EETTCTTCCGGGSBCS-EEEEEETTTCCEEEEEECCCSSSSCCCSCCCCCCCCCCCCSTTTSCC-CCCCCCCCEEECTTC
T ss_pred ecCCCCCccccccccc-eEEEEECCCCEEEEEEecCcCcccccccccCCCCCCCCCcChhHccc-ccCCCCCcceeCCCC
Confidence 94 68999999999 789999999999999974 11 1 23345567999887754 899999999999999
Q ss_pred CeeEEeccEEeeeceEEEEeecCCCceeEEeeEEeCCCCCcceEEEEeeeeeeEEeecCCCCcccccceeeecCCCCCCc
Q 006113 248 PSFNIVGSQIRWADWEFHLSFDARAGMIISVASIYDPEKQQSRQVLYKGHVSELFVPYMDLTEEWYYRSFFDVGEYGYGL 327 (660)
Q Consensus 248 ~sf~v~g~~V~W~~W~f~~gf~~reGlvL~~v~~~D~~~~~~r~I~yrlsl~Em~vpYgdp~~~~~~k~~fD~geyG~G~ 327 (660)
+||+|+|++|+||+|+||||||+|||||||||+|+| |||+||+|||||+||||||+++|++|+|||+||||+|.
T Consensus 236 ~sF~v~g~~V~W~~W~f~vgf~~reGlvL~dv~y~g------r~V~YrlSl~Em~VPYgdp~~p~~~k~afD~GeyG~G~ 309 (633)
T 3loy_A 236 PSFNVDGHKISWQGWEFFVIPTVREGFAIYDIHFKG------RSVVYRLSLSEMTVPYGDPRAPFHRKQAFDLGDCGFGA 309 (633)
T ss_dssp CSEEEETTEEEETTEEEEEEEETTTEEEEEEEEETT------EEEEEEEEEEEEEEEBCCCSTTGGGCEEEHHHHTCTTT
T ss_pred CCEEEcCCccccCCcEEEEecCCCcCcEEEeeEECC------EEEEEEEEeeeEEEeCCCCCChhhhheeecccccCccc
Confidence 999999999999999999999999999999999954 89999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcEEeeeEEecCCCceeEecceEEEeEeeCCCceeccccCCCCcceEeeeeeceEEEEEEeeeeccc
Q 006113 328 SSLPLEPLRDCPPNAVFMDAYFAKNDGMPLKMPNVFCIFERYAGDVMWRHTEATDPEKLIREVRPEVSLVVRTVSTVGNY 407 (660)
Q Consensus 328 ~a~~L~~G~DCpg~~~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~kH~~~~~~~~~~~~~r~~~~LVvr~i~TVgNY 407 (660)
+||+|++||||||+|+|||+++.+++|+|++++|||||||+| .|++|||++++++.++++|+| +||||+|+|||||
T Consensus 310 ~a~~L~~GcDCpg~i~YlD~~~~~~~G~p~~~~naICihE~d-~Gi~~kHt~~r~~~~~v~r~r---~LVvr~i~TVgNY 385 (633)
T 3loy_A 310 TGNSLALGCDCLGVIKYMDCRRVNTNGDSVLIPNTVCLHEQD-GGLLYKHTNYRTNVPVIARRR---EFVVQTIATVANA 385 (633)
T ss_dssp TBCCSTTTTCSCSSEEEEEEEEECTTSCEEEEEEEEEEEEEE-EEEEEEEECTTTCCEEEEEEE---EEEEEEEEEETTE
T ss_pred cccCCccCCCCCCCcEEeeeEEecCCCCEEEecceEEEEecc-CCceeeeccccCCceeEEEee---EEEEEEEeeccce
Confidence 999999999999999999999999999999999999999999 779999999998877776666 9999999999999
Q ss_pred cceEEEEEeeCccEEEEEeEeeeeeeeeccccCCCCcccccccceeccCcccccceeeEEeeeecCCCCCCCceEEEEEE
Q 006113 408 DYINDWEFKQSGSIKVTVGLTGMLEVRGTNYTHKDQIEEDVYGTLIAENTIGVRHDHFLTYRLDLDVDGDANSFVKSKLR 487 (660)
Q Consensus 408 dY~~~w~F~~DGtIe~ev~aTGil~~~~~~~~~~~~~~~~~yGt~V~~~~~~~~HqH~f~~RlD~dIdG~~Nsv~~~d~v 487 (660)
||||+|+|||||+||+||||||||+++++. ++++.+|||+|+|+++|++|||+|||||||||||.+|||+++|++
T Consensus 386 dYif~w~F~~dG~Ie~ev~aTGil~t~~~~-----~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~ 460 (633)
T 3loy_A 386 EYMLNIIFDQAGEIRIHVRATGILSTMPLD-----KDVTVPWGTNVGPRVMAAYHQHMLSFRIDPAVDGYENTVVFDDVI 460 (633)
T ss_dssp EEEEEEEEETTSCEEEEEEEEECCCCEECC-----TTCCCTTEEEEETTEEEECEEEEEEEEEEECTTSSCBEEEEEEEE
T ss_pred eEEEEEEEecCCeEEEEEEEEEEEeeeecC-----CcccCCCcceecCCccccceeEEEEEEecccccCCCCEEEEEeee
Confidence 999999999999999999999999987642 223578999999999999999999999999999999999999999
Q ss_pred EeecCCCCCCcceeEEEEEEEeechhhHhhhcCC-CCcEEEEecCCCCCCC-CCceeEEEeeCCCcCcCCCCCChhhhcc
Q 006113 488 TVRVNDHGSPRKSYWTVDRETARTESAARIKLGS-EPVDLLFVNPNKKTKM-GNLIGYRLVPYGVVGPLLSDDDYPQIRA 565 (660)
Q Consensus 488 ~~~~~~~~np~~~~~~~~~~~l~tE~~a~~~~~~-~~r~~~ivN~~~~N~~-G~p~gY~l~p~~~~~~~~~~~s~~~~ra 565 (660)
+++.....||++|+|+++++++++| |++++++ ++|+|+|+|++++|++ |+|+||||+|++++++|+.++|+..+||
T Consensus 461 ~~~~~~~~nP~g~~~~~~~t~l~~e--a~~~~~~~~~r~~~i~N~~~~N~~~G~p~gYkl~p~~~~~ll~~~~s~~~~Ra 538 (633)
T 3loy_A 461 RMEKNTKLNPYNVGFVTERTVVEKP--GYVEQSPFTNRSYKIINENKINPISKKPVAYKIMMPARQMLLADEDSYNNKRA 538 (633)
T ss_dssp ECCSSSSSSTTSCCEEEEEEECCSS--EEECCCGGGTCEEEEEEEEEECTTTCSEEEEEEECCCCCCCCSCSSSHHHHHC
T ss_pred ecCCCCCCCCCCcceEEEEEEeccc--cccccCCCCccEEEEECCCCcCCCCCccceEEEccCCCCcccCCCCchhhhcc
Confidence 9988655899999999999999876 6799999 9999999999999996 9999999999999999999999999999
Q ss_pred cccccceEEeeecCCccCCCCcCCCCCCCCCChhhhccCCCceecCCeEEEEEecceeCCCCCCCCCcccccceeEEEeC
Q 006113 566 AFTNYNAWVTAYNISEKWAGGLYADQSRGDDTLSVWSKRNRSIENKDIVLWYTLGFHHVPCQEDFPVMPTFNGGFELRPS 645 (660)
Q Consensus 566 ~fa~~~lwVT~y~~~E~~asg~y~~q~~~~~~l~~~~~~~e~i~~~DlV~W~t~G~~HvPr~ED~Pvmp~~~~~f~L~P~ 645 (660)
+||+|+||||||+|+|+||||+|+||+.+++||++|+++||+|+|||||+|+|||+||+||+|||||||++++||+|||+
T Consensus 539 ~fa~~~lwVT~y~d~E~~aag~y~nQs~~~~gl~~w~~~~e~i~n~DiV~W~t~G~~HiPr~ED~PvMP~~~~~f~LrP~ 618 (633)
T 3loy_A 539 QFATQQVWVTKYRDNELYAAGEFTNQSQTDTGLGVWARRDENVRNDNPVVWATLGFTHIPRVEDFPVMPVEAHEIALVPF 618 (633)
T ss_dssp GGGGSSEEEEECCTTCCCTTCSCCTTCSSCCSHHHHTTCCCCCTTBCEEEEEEEEEEECCCGGGCSSEEEEEEEEEEEEE
T ss_pred chhhcceEEecCCCCccccCCCCccCCCCCCChHHHhcCCCccccCceEEEEecCcccCCCcccCCCCccceeeEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCC
Q 006113 646 NFFESNPVLKVVPPS 660 (660)
Q Consensus 646 nFFd~nP~ldvP~~~ 660 (660)
||||+||+|||||+.
T Consensus 619 nFFd~nP~ldvp~s~ 633 (633)
T 3loy_A 619 GFFDKNPALSVPQST 633 (633)
T ss_dssp SSSSSCGGGGSCCCC
T ss_pred CcCCCCccccCCCCC
Confidence 999999999999973
No 4
>1w6g_A Phenylethylamine oxidase; copper containing, metal-binding, oxidoreductase, TPQ, quinone, holoenzyme; HET: TPQ GOL; 1.55A {Arthrobacter globiformis} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 PDB: 1w6c_A* 1rjo_A* 2bt3_A* 2cfd_A* 2cfg_A* 2cfk_A* 2cfl_A* 2cfw_A* 2cg0_A* 2cg1_A* 1w4n_A* 1sih_A* 1sii_A* 1w5z_A* 3kii_A* 3kn4_A* 1iqy_A* 1avl_A* 1av4_A* 1iqx_A* ...
Probab=100.00 E-value=1.5e-184 Score=1551.71 Aligned_cols=612 Identities=25% Similarity=0.438 Sum_probs=572.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCceEEEEEEccCCChHhhHhhhhcCCCCCCCCEeEEEEEe--CCeeEEEEE
Q 006113 23 HQYHPLDSLTPSEFTQIQSIVTKAYPKSTYNLTFQYVGLKEPTKQTVLSWLRNETTTNPPRQAFVVARI--DHQTHEIIV 100 (660)
Q Consensus 23 ~~~HPLdpLs~~Ei~~a~~~l~~~~~~~~~~~~f~~I~L~EP~K~~vl~~l~~~~~~~p~R~A~vv~~~--~~~~~E~iV 100 (660)
..+|||||||++||++|++||+++.... .+++|.+|+|.||+|++ + .++|+|+|+|++++ ++.++|++|
T Consensus 5 ~~~HPldpLs~~Ei~~a~~iv~~~~~~~-~~~~F~~i~L~eP~K~~------g--~~~P~R~A~vv~~~~~~~~~~E~vV 75 (646)
T 1w6g_A 5 QTASPFRLASAGEISEVQGILRTAGLLG-PEKRIAYLGVLDPARGA------G--SEAEDRRFRVFIHDVSGARPQEVTV 75 (646)
T ss_dssp --CCTTCCCCHHHHHHHHHHHHHTTCCC-TTEEEEEEEECCCCSCC------S--SSCCCCEEEEEEEETTSCCCEEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhcccCC-CCcEEEEEEccCCchhh------C--CCCCCeEEEEEEEECCCCcEEEEEE
Confidence 4569999999999999999999987643 58899999999999998 2 34689999999998 578999999
Q ss_pred ECCCCeEEE---EeeeCCCCCCCCCHHHHHHHHHHHhcChHHHHHHHhcCC-CCCceEEccccccccCCC-CCceeEEEE
Q 006113 101 DLSLQGITS---KKTYNGYGYPLLTGEEQEDANKLASTYPLFVASISKRGL-KLEEVVCGSFTVGWFGEE-RKNKRIVKM 175 (660)
Q Consensus 101 ~L~~~~v~~---~~~~~~~~~p~~~~eE~~~~e~~~~~~p~~~~a~~~~Gi-~~~~v~~d~w~~G~~~~~-~~~rRl~~~ 175 (660)
+|+.++|++ ++.+++ +||+++.|||.+++++|+++|+|+++|++||| +++.|+| ||++||++.. +.+||++|+
T Consensus 76 ~L~~~~v~~~~~~~~~~~-~~~~~~~~E~~~~e~~~~~~p~~~~~i~~~gl~~~~~v~~-pw~~g~~~~~~~~~~Rl~~~ 153 (646)
T 1w6g_A 76 SVTNGTVISAVELDTAAT-GELPVLEEEFEVVEQLLATDERWLKALAARNLDVSKVRVA-PLSAGVFEYAEERGRRILRG 153 (646)
T ss_dssp ETTTTEEEEEEECCHHHH-CBCCCCHHHHHHHHHHHTTCHHHHHHHHHTTCCGGGEEEE-EEECCCCSCGGGTTSCEEEE
T ss_pred ECCCCeEEecccceeCCC-ccCCCCHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCeeEE-eecccccCCccCCCcEEEEE
Confidence 999999998 778874 69999999999999999999999999999999 4677999 9999988765 347999999
Q ss_pred EEEEec-CCCCcccccCCCeEEEEeCCCcEEEEEeCCceeeCCCCCCCCCccCcCCCCCCCCCCCceeeCCCCCeeEEe-
Q 006113 176 MCYYLD-GTLNADMRPIEGITMTVDLDEMKIIQFRDRIIVPVPKSDGTEYRESKLKPPFRPSLKRTTVVQPDGPSFNIV- 253 (660)
Q Consensus 176 ~~~~r~-~~~n~YahPl~gl~~~vD~~~~~vv~i~d~~~~~~p~~~~~~y~~~~~~~~~r~~lkp~~i~QPeG~sf~v~- 253 (660)
+||+|. +++|+|||||+||+++||+.++||++|++.+.++.|. +..+|+++.+.++.|+++|||+|+||||+||+|+
T Consensus 154 ~~~~r~~~~~n~Ya~Pl~gl~~vvD~~~~~Vi~v~~~~~~~~p~-~~~~y~~~~~~~~~r~~lkP~~i~QPeGpsF~V~~ 232 (646)
T 1w6g_A 154 LAFVQDFPEDSAWAHPVDGLVAYVDVVSKEVTRVIDTGVFPVPA-EHGNYTDPELTGPLRTTQKPISITQPEGPSFTVTG 232 (646)
T ss_dssp EEEECSSTTCCGGGSBCTTEEEEEETTTTEEEEEEECCCCCCCC-SCCCTTCHHHHCSCCCCCCCCCCCCTTCCSCEEET
T ss_pred EEEEecCCCCCccccccCceEEEEECCCCEEEEEEeCCccCCCC-CCCccchhhcCCCcCCCCCCceecCCCCCceEEeC
Confidence 999997 5789999999999999999999999999987666665 4558987765456799999999999999999999
Q ss_pred ccEEeeeceEEEEeecCCCceeEEeeEEeCCCCCcceEEEEeeeeeeEEeecCCCCcccccceeeecCCCCCCcCCCCCC
Q 006113 254 GSQIRWADWEFHLSFDARAGMIISVASIYDPEKQQSRQVLYKGHVSELFVPYMDLTEEWYYRSFFDVGEYGYGLSSLPLE 333 (660)
Q Consensus 254 g~~V~W~~W~f~~gf~~reGlvL~~v~~~D~~~~~~r~I~yrlsl~Em~vpYgdp~~~~~~k~~fD~geyG~G~~a~~L~ 333 (660)
|+.|+||||+||||||+|||||||||+|+| .|+.|||+||+|||||+||||||+++|++|+|||+||||+|.+||+|+
T Consensus 233 G~~V~W~~W~F~vgfn~ReGlvL~dV~y~~--~g~~R~V~YrlSlsEm~VPYgdp~p~~~~k~afD~GeyG~G~~an~L~ 310 (646)
T 1w6g_A 233 GNHIEWEKWSLDVGFDVREGVVLHNIAFRD--GDRLRPIINRASIAEMVVPYGDPSPIRSWQNYFDTGEYLVGQYANSLE 310 (646)
T ss_dssp TTEEEETTEEEEEEEETTTEEEEEEEEEEE--TTEEEEEEEEEEEEEEEEEBCCCCTTTTTCEEECCCCCCGGGGBCCCC
T ss_pred CCEEEeCCCEEEEecCCCcceEEEEEEEcC--CCCceEEEEEeeeeEEEEeCCCCCchhhcceeeeccCcCCcccccccc
Confidence 999999999999999999999999999999 577899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcEEeeeEEecCCCceeEecceEEEeEeeCCCceeccccCCCCcceEeeeeeceEEEEEEeeeeccccceEEE
Q 006113 334 PLRDCPPNAVFMDAYFAKNDGMPLKMPNVFCIFERYAGDVMWRHTEATDPEKLIREVRPEVSLVVRTVSTVGNYDYINDW 413 (660)
Q Consensus 334 ~G~DCpg~~~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~kH~~~~~~~~~~~~~r~~~~LVvr~i~TVgNYdY~~~w 413 (660)
+||||||+|+|||+++.+++|+|++++|||||||+| .||||||++++++.++++ |+++||||+|+|||||||||+|
T Consensus 311 lGcDCpg~i~Y~D~~~~~~~G~p~~~~naICihE~d-~GilwkH~~~r~~~~~v~---r~r~LVvr~i~Tv~NYdYi~~w 386 (646)
T 1w6g_A 311 LGCDCLGDITYLSPVISDAFGNPREIRNGICMHEED-WGILAKHSDLWSGINYTR---RNRRMVISFFTTIGNADYGFYW 386 (646)
T ss_dssp BTTTBCSSCEEECCEEECTTSCEEECTTCEEEEEEE-EEEEEEEECTTTCCEEEE---EEEEEEEEEEEEETTEEEEEEE
T ss_pred cCCCCCCCCEEEeEEEEcCCCCEEEcCCEEEEeecc-CCcceeeecccCCceeee---cccEEEEEEEeeccccceEEEE
Confidence 999999999999999999999999999999999999 559999999999755554 4559999999999999999999
Q ss_pred EEeeCccEEEEEeEeeeeeeeeccccCCCCcccccccceeccCcccccceeeEEeeeecCCCCCCCceEEEEEEEeecCC
Q 006113 414 EFKQSGSIKVTVGLTGMLEVRGTNYTHKDQIEEDVYGTLIAENTIGVRHDHFLTYRLDLDVDGDANSFVKSKLRTVRVND 493 (660)
Q Consensus 414 ~F~~DGtIe~ev~aTGil~~~~~~~~~~~~~~~~~yGt~V~~~~~~~~HqH~f~~RlD~dIdG~~Nsv~~~d~v~~~~~~ 493 (660)
+|||||+||+||+|||||+|+++.. ++.+|||+|+|+++|++|||+|||||||||||.+|||+++|+++++.+
T Consensus 387 ~F~~dG~Ie~ev~aTGil~t~~~~~------~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~- 459 (646)
T 1w6g_A 387 YLYLDGTIEFEAKATGVVFTSAFPE------GGSDNISQLAPGLGAPFHQHIFSARLDMAIDGFTNRVEEEDVVRQTMG- 459 (646)
T ss_dssp EEETTSCEEEEEEEEECCCCEECCT------TCCSSEEEEETTEEEECEEEEEEEEEEECTTSSCBEEEEEEEEECCSB-
T ss_pred EEecCCeEEEEEEEEEEEeeeecCC------ccCCCcceecCCcccccceEEEEEeecccccCCCCEEEEEeeEeccCC-
Confidence 9999999999999999999887532 246899999999999999999999999999999999999999999875
Q ss_pred CCCCcceeEEEEEEEeechhhHhhhcCC-CCcEEEEecCCCCCCCCCceeEEEeeCCCcCcCCCCCChhhhcccccccce
Q 006113 494 HGSPRKSYWTVDRETARTESAARIKLGS-EPVDLLFVNPNKKTKMGNLIGYRLVPYGVVGPLLSDDDYPQIRAAFTNYNA 572 (660)
Q Consensus 494 ~~np~~~~~~~~~~~l~tE~~a~~~~~~-~~r~~~ivN~~~~N~~G~p~gY~l~p~~~~~~~~~~~s~~~~ra~fa~~~l 572 (660)
+.||++++|++++++++||++|+++++. ++|+|+|+|++++|++|+|+||||+|+++++++++++|+..+||+||+|+|
T Consensus 460 ~~np~~~~~~~~~t~~~tE~ea~~~~~~~~~r~~~i~N~~~~N~~G~p~gYkl~~~~~~~~l~~~~s~~~~ra~fa~~~l 539 (646)
T 1w6g_A 460 PGNERGNAFSRKRTVLTRESEAVREADARTGRTWIISNPESKNRLNEPVGYKLHAHNQPTLLADPGSSIARRAAFATKDL 539 (646)
T ss_dssp TTBTTSCCEEEEEEEECBGGGCEECCCGGGTCEEEEEEEEEECTTSCEEEEEEEECCCCCCCSCTTSHHHHHTGGGGSSE
T ss_pred CCCCCCceeEEEEEEccchhhhhhccCCCCCcEEEEeCCCCcCCCCCeeeEEEccCCcccccCCCCccccccccccccce
Confidence 5899999999999999999999999999 899999999999999999999999999999999999999999999999999
Q ss_pred EEeeecCCccCCCCcCCCCCCCCCChhhhccCCCceecCCeEEEEEecceeCCCCCCCCCcccccceeEEEeCCCCCCCC
Q 006113 573 WVTAYNISEKWAGGLYADQSRGDDTLSVWSKRNRSIENKDIVLWYTLGFHHVPCQEDFPVMPTFNGGFELRPSNFFESNP 652 (660)
Q Consensus 573 wVT~y~~~E~~asg~y~~q~~~~~~l~~~~~~~e~i~~~DlV~W~t~G~~HvPr~ED~Pvmp~~~~~f~L~P~nFFd~nP 652 (660)
|||||+|+|+||||+|+||+.++++|++|+++||+|+|||||+|+|||+||+||+|||||||++++||+|||+||||+||
T Consensus 540 wVT~y~d~E~~aag~y~nQs~~~~~l~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~ED~PvMP~~~~~f~L~P~nFF~~nP 619 (646)
T 1w6g_A 540 WVTRYADDERYPTGDFVNQHSGGAGLPSYIAQDRDIDGQDIVVWHTFGLTHFPRVEDWPIMPVDTVGFKLRPEGFFDRSP 619 (646)
T ss_dssp EEEECCTTCCCTTCSCCBTCCSSSSHHHHHTTCCBCTTBCEEEEEEEEEEECCCGGGSSSEEEEEEEEEEEESSCSSSCT
T ss_pred EEeccCCCccccCCCCcccCCCCCChhHHhhCCCCcccCceEEEEeCccccCCCccccCCCCCceEEEEEEecCcCCCCC
Confidence 99999999999999999999998999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCC
Q 006113 653 VLKVVPP 659 (660)
Q Consensus 653 ~ldvP~~ 659 (660)
+||+|++
T Consensus 620 ~ldvp~~ 626 (646)
T 1w6g_A 620 VLDVPAN 626 (646)
T ss_dssp TTTCCCC
T ss_pred CccCCCc
Confidence 9999986
No 5
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A*
Probab=100.00 E-value=6.8e-181 Score=1546.82 Aligned_cols=622 Identities=32% Similarity=0.601 Sum_probs=571.1
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCceEEEEEEccCCChHhhHhhhhcCCCCCCCCEeEEEEEeCCeeEEEEEE
Q 006113 22 SHQYHPLDSLTPSEFTQIQSIVTKAYPKSTYNLTFQYVGLKEPTKQTVLSWLRNETTTNPPRQAFVVARIDHQTHEIIVD 101 (660)
Q Consensus 22 ~~~~HPLdpLs~~Ei~~a~~~l~~~~~~~~~~~~f~~I~L~EP~K~~vl~~l~~~~~~~p~R~A~vv~~~~~~~~E~iV~ 101 (660)
...+|||||||++||++|+++|+++.... ++++|.+|+|+||+|++||+|+..+++++|+|+|+|+++++++++|++|+
T Consensus 90 ~~~~HPLdpLs~~Ei~~a~~il~~~~~~~-~~~~F~~i~L~eP~K~~vl~~~~~~~~~~p~R~A~vv~~~~~~~~e~vV~ 168 (727)
T 1spu_A 90 EKRPHPLNALTADEIKQAVEIVKASADFK-PNTRFTEISLLPPDKEAVWAFALENKPVDQPRKADVIMLDGKHIIEAVVD 168 (727)
T ss_dssp CSSCCTTCCCCHHHHHHHHHHHHTSTTCC-TTCEEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEEEETTEEEEEEEE
T ss_pred cccCCCCCcCCHHHHHHHHHHHHhcccCC-CCcEEEEEEecCCCHHHHHhHHhcCCCCCCCeEEEEEEEeCCeEEEEEEe
Confidence 45679999999999999999999875433 57899999999999999999975433446899999999999999999999
Q ss_pred CCCCeEEEEeeeCCCCCCCCCHHHHHHHHHHHhcChHHHHHHHhcCC-CCCceEEccccccccCCCC---CceeEEEEEE
Q 006113 102 LSLQGITSKKTYNGYGYPLLTGEEQEDANKLASTYPLFVASISKRGL-KLEEVVCGSFTVGWFGEER---KNKRIVKMMC 177 (660)
Q Consensus 102 L~~~~v~~~~~~~~~~~p~~~~eE~~~~e~~~~~~p~~~~a~~~~Gi-~~~~v~~d~w~~G~~~~~~---~~rRl~~~~~ 177 (660)
|+.++|++++.+++ +||+++.|||.+++++|+++|.|+++|++||| ++..|+||||++|+++.++ ++||++|++|
T Consensus 169 l~~~~v~~~~~~~~-~~~~~~~~e~~~~e~~~~~~p~~~~~~~~~gl~~~~~v~~dpw~~g~~~~~~~~~~~~R~~~~~~ 247 (727)
T 1spu_A 169 LQNNKLLSWQPIKD-AHGMVLLDDFASVQNIINNSEEFAAAVKKRGITDAKKVITTPLTVGYFDGKDGLKQDARLLKVIS 247 (727)
T ss_dssp TTTTEEEEEEEETT-CCCCCCHHHHHHHHHHHHHCHHHHHHHHHTTCSCTTSEEEEEECCCCCTTTTCCCSSSCEEEEEE
T ss_pred CCCCceEEEEeCCC-cCCCCCHHHHHHHHHHHHhCHHHHHHHHHhCCCccceEEEccccccccCCCCCCCCCcEEEEEEE
Confidence 99999999999985 69999999999999999999999999999999 7899999999999887432 4799999999
Q ss_pred EEecCCCCcccccCCCeEEEEeCCCcEEEEEeCCceeeCCCCCCCCCccCcCCCCCCCCCCCceeeCCCCCeeEEeccEE
Q 006113 178 YYLDGTLNADMRPIEGITMTVDLDEMKIIQFRDRIIVPVPKSDGTEYRESKLKPPFRPSLKRTTVVQPDGPSFNIVGSQI 257 (660)
Q Consensus 178 ~~r~~~~n~YahPl~gl~~~vD~~~~~vv~i~d~~~~~~p~~~~~~y~~~~~~~~~r~~lkp~~i~QPeG~sf~v~g~~V 257 (660)
|++.+++|+|||||+||.++||++++||++|++.+.+++|... .+|++.. +.|+++|||+|+||||+||+|+|++|
T Consensus 248 ~~~~~~~n~Ya~Pl~g~~~vvD~~~~~V~~i~~~~~~~~p~~~-~~y~~~~---~~r~~lkP~~i~QPeG~sF~v~g~~V 323 (727)
T 1spu_A 248 YLDVGDGNYWAHPIENLVAVVDLEQKKIVKIEEGPVVPVPMTA-RPFDGRD---RVAPAVKPMQIIEPEGKNYTITGDMI 323 (727)
T ss_dssp EECCSSSCGGGSBCTTEEEEEETTTTEEEEEEECCCCCCCCSC-CCSSSTT---EECCCCCCCEEECTTCCSEEEETTEE
T ss_pred EEECCCCCccccCccceEEEEecccCEEEEEEcCCccccCCCC-CCccccc---cccCCCCCccccCCCCCCEEECCCcc
Confidence 9976778999999999999999999999999988776677544 4687654 46999999999999999999999999
Q ss_pred eeeceEEEEeecCCCceeEEeeEEeCCCCCcceEEEEeeeeeeEEeecCCCCcccccceeeecCCCCCCcCCCCCCCCCC
Q 006113 258 RWADWEFHLSFDARAGMIISVASIYDPEKQQSRQVLYKGHVSELFVPYMDLTEEWYYRSFFDVGEYGYGLSSLPLEPLRD 337 (660)
Q Consensus 258 ~W~~W~f~~gf~~reGlvL~~v~~~D~~~~~~r~I~yrlsl~Em~vpYgdp~~~~~~k~~fD~geyG~G~~a~~L~~G~D 337 (660)
+||||+||||||+|||||||||+|+| .|+.|||+||+|||||+||||||+++|++|+|||+||||+|.+||+|++|||
T Consensus 324 ~W~~W~F~vgf~~reGlvL~dV~y~~--~g~~r~V~YrlSl~Em~VPYgdp~~~~~~k~~fD~GeyG~G~~a~~L~lGcD 401 (727)
T 1spu_A 324 HWRNWDFHLSMNSRVGPMISTVTYND--NGTKRKVMYEGSLGGMIVPYGDPDIGWYFKAYLDSGDYGMGTLTSPIARGKD 401 (727)
T ss_dssp EETTEEEEEEEETTTEEEEEEEEEEE--TTEEEEEEEEEEEEEEEEEBCCCSTTTTTCEECHHHHHCTTTTBCCCCTTTT
T ss_pred ccCCcEEEEecCCCCceEEEEEEEcC--CCceEEEEEEeEeeEEEEeCCCCCCchhcceeeeccCcCCcccccccccCCC
Confidence 99999999999999999999999999 6788999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEeeeEEecCCCceeEecceEEEeEeeCCCceeccccCCCCcceEeeeeeceEEEEEEeeeeccccceEEEEEee
Q 006113 338 CPPNAVFMDAYFAKNDGMPLKMPNVFCIFERYAGDVMWRHTEATDPEKLIREVRPEVSLVVRTVSTVGNYDYINDWEFKQ 417 (660)
Q Consensus 338 Cpg~~~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~kH~~~~~~~~~~~~~r~~~~LVvr~i~TVgNYdY~~~w~F~~ 417 (660)
|||+|+|||+++.+++|+|++++|||||||+| .||||||++++.. ..++ ++++||||+|+|||||||||+|+|||
T Consensus 402 Cpg~i~Y~D~~~~~~~G~p~~~~naiCi~E~d-~G~l~kH~~~~~~-~~~~---r~r~LVv~~i~Tv~NYdYi~~w~F~~ 476 (727)
T 1spu_A 402 APSNAVLLNETIADYTGVPMEIPRAIAVFERY-AGPEYKHQEMGQP-NVST---ERRELVVRWISTVGNYDYIFDWIFHE 476 (727)
T ss_dssp SCTTCEEEEEEEECTTSCEEEEEEEEEEEEEE-EEEEEEECCTTSC-CEEE---EEEEEEEEEEEEETTEEEEEEEEEET
T ss_pred CCCCCEEeeeEEEcCCCCEEEeCCeEEEeccc-CCcceeeeccCCC-ceee---eceEEEEEEEEeecccceEEEEEEec
Confidence 99999999999999999999999999999999 5699999999853 3333 45599999999999999999999999
Q ss_pred CccEEEEEeEeeeeeeeeccccCCCCc---ccccccceeccCcccccceeeEEeeeecCCCCCCCceEEEEEEEeecCCC
Q 006113 418 SGSIKVTVGLTGMLEVRGTNYTHKDQI---EEDVYGTLIAENTIGVRHDHFLTYRLDLDVDGDANSFVKSKLRTVRVNDH 494 (660)
Q Consensus 418 DGtIe~ev~aTGil~~~~~~~~~~~~~---~~~~yGt~V~~~~~~~~HqH~f~~RlD~dIdG~~Nsv~~~d~v~~~~~~~ 494 (660)
||+||+||||||||+++++.+....+. .+.+|||+|+|+++|++|||+|||||||||||.+|||+++|+++++.+ +
T Consensus 477 dG~I~~ev~aTGil~~~~~~~t~~~~~~~~~~~~yGt~v~~~~~a~~HqH~f~~RlD~dVdG~~Nsv~~~d~~~~~~~-~ 555 (727)
T 1spu_A 477 NGTIGIDAGATGIEAVKGVKAKTMHDETAKDDTRYGTLIDHNIVGTTHQHIYNFRLDLDVDGENNSLVAMDPVVKPNT-A 555 (727)
T ss_dssp TSCEEEEEEEEECCCEEECSCSSTTSTTHHHHTTTEEEEETTEEEECEEEEEEEEEEECTTSSEEEEEEEEEEEEECC-S
T ss_pred CceEEEEEEEEEEEEeccccccccccccccccCCCcceecCCcccccceeEEEEeecccccCCCCeEEEEeeEEccCC-C
Confidence 999999999999999886542222111 236899999999999999999999999999999999999999999875 4
Q ss_pred CCCcceeEEEEEEEeechhhHhhhcCC-CCcEEEEecCCCCCCCCCceeEEEee--CCC----cCcCCCCCChhhhcccc
Q 006113 495 GSPRKSYWTVDRETARTESAARIKLGS-EPVDLLFVNPNKKTKMGNLIGYRLVP--YGV----VGPLLSDDDYPQIRAAF 567 (660)
Q Consensus 495 ~np~~~~~~~~~~~l~tE~~a~~~~~~-~~r~~~ivN~~~~N~~G~p~gY~l~p--~~~----~~~~~~~~s~~~~ra~f 567 (660)
.||++++|++++++++||++|++++++ ++|+ |+|++++|++|+|+||||+| +++ +++++.++|+..+||+|
T Consensus 556 ~np~~~~~~~~~t~~~tE~~a~~~~~~~~~r~--i~n~~~~N~~G~p~gYkl~~~~~~~~~~~~~~l~~~~s~~~~ra~f 633 (727)
T 1spu_A 556 GGPRTSTMQVNQYNIGNEQDAAQKFDPGTIRL--LSNPNKENRMGNPVSYQIIPYAGGTHPVAKGAQFAPDEWIYHRLSF 633 (727)
T ss_dssp CSSCSEEEEEEEEEECBHHHHSBCCCTTSEEE--EEEEEEECTTSCEEEEEEEEEEEESSCBCCSCSSCTTCHHHHHCGG
T ss_pred CCCCCceeEEEEEEccchhhhhhccCCCCcEE--EeCCCCcCCCCCeeeEEEecCCCCccccccccccCCcchhhhhhcc
Confidence 799999999999999999999999999 7777 99999999999999999999 333 56889999999999999
Q ss_pred cccceEEeeecCCccCCCCcCCCCCCCCCChhhhccCCCceecCCeEEEEEecceeCCCCCCCCCcccccceeEEEeCCC
Q 006113 568 TNYNAWVTAYNISEKWAGGLYADQSRGDDTLSVWSKRNRSIENKDIVLWYTLGFHHVPCQEDFPVMPTFNGGFELRPSNF 647 (660)
Q Consensus 568 a~~~lwVT~y~~~E~~asg~y~~q~~~~~~l~~~~~~~e~i~~~DlV~W~t~G~~HvPr~ED~Pvmp~~~~~f~L~P~nF 647 (660)
|+|+||||||+|+|+||||+|+||+++++||++|+++||+|+|||||+|||||+||+||+|||||||++++||+|||+||
T Consensus 634 a~~~lwVT~y~d~E~~a~g~y~~q~~~~~gl~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~ED~Pvmp~~~~~f~L~P~nF 713 (727)
T 1spu_A 634 MDKQLWVTRYHPGERFPEGKYPNRSTHDTGLGQYSKDNESLDNTDAVVWMTTGTTHVARAEEWPIMPTEWVHTLLKPWNF 713 (727)
T ss_dssp GGCSEEEEECCTTCCCTTCSCCTTCSSCCSHHHHHTTCCBCSSEEEEEEEEEEEEECCCGGGSSSEEEEEEEEEEEEESS
T ss_pred cccceEEeccCCcccCCCCCCccCCCCCCCHHHHhhCCCccccCCcEEEEecccccCCChhhCCCCcccEEEEEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCC
Q 006113 648 FESNPVLKVVPP 659 (660)
Q Consensus 648 Fd~nP~ldvP~~ 659 (660)
||+||+|||||+
T Consensus 714 Fd~nPaldvp~~ 725 (727)
T 1spu_A 714 FDETPTLGALKK 725 (727)
T ss_dssp SSSCTTSCCBC-
T ss_pred CCCCCCcCCCCC
Confidence 999999999986
No 6
>1tu5_A Copper amine oxidase, liver isozyme; oxidoreductase, quinoenzyme, TPQ; HET: TPQ NAG NDG; 2.37A {Bos taurus} PDB: 2pnc_A* 3ala_A* 2y73_A* 1pu4_A* 1us1_A* 2y74_A* 2c10_A* 2c11_A*
Probab=100.00 E-value=2.7e-164 Score=1402.36 Aligned_cols=607 Identities=24% Similarity=0.337 Sum_probs=512.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhC---CCC------CCceEEEEEEccCCChHhhHhhhhcCCCCCCCCEeEEEEEeC--
Q 006113 24 QYHPLDSLTPSEFTQIQSIVTKAY---PKS------TYNLTFQYVGLKEPTKQTVLSWLRNETTTNPPRQAFVVARID-- 92 (660)
Q Consensus 24 ~~HPLdpLs~~Ei~~a~~~l~~~~---~~~------~~~~~f~~I~L~EP~K~~vl~~l~~~~~~~p~R~A~vv~~~~-- 92 (660)
.+|||||||++||++|+++|+++. +.+ .+| .|++|+|.||+|++||+||+++ +++|+|+|+|+++++
T Consensus 39 ~~~~~~~Ls~~E~~~V~~~L~~~~~l~L~~~~~a~~~dn-~i~~IeL~~P~K~~vL~~Ld~~-~~~P~R~A~vv~~~~~~ 116 (746)
T 1tu5_A 39 QSQLFADLSREELTTVMSFLTQQLGPDLVDAAQARPSDN-CVFSVELQLPPKAAALAHLDRG-SPPPAREALAIVFFGGQ 116 (746)
T ss_dssp --CCSSCCCHHHHHHHHHHHHHHHCSSCBCTTTCCTTSE-EEEEEEEECCCHHHHHHHHHHC-CCCCCCEEEEEEEECSS
T ss_pred CCCcCCCCCHHHHHHHHHHHhccCccCccccccCCcccc-EEEEEECCCCCHHHhhhhhcCC-CCCCCccEEEEEEeCCC
Confidence 369999999999999999999875 222 235 7888999999999999999987 467899999999985
Q ss_pred --CeeEEEEEE-CCCCeEEEEeeeC--CCCCC----CCCHHHHHHHHHHHhcChHHHHHHHhcCC-CCCc--eEEccccc
Q 006113 93 --HQTHEIIVD-LSLQGITSKKTYN--GYGYP----LLTGEEQEDANKLASTYPLFVASISKRGL-KLEE--VVCGSFTV 160 (660)
Q Consensus 93 --~~~~E~iV~-L~~~~v~~~~~~~--~~~~p----~~~~eE~~~~e~~~~~~p~~~~a~~~~Gi-~~~~--v~~d~w~~ 160 (660)
+.++|++|+ |+.+++.+....+ +..+| +++.+||.+++++|+++|++++++.++|+ ++.. ++|++|..
T Consensus 117 ~~~~v~E~vV~PL~~~~~~~~~~~~~~~~~~p~~~r~i~~~E~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~ 196 (746)
T 1tu5_A 117 PQPNVTELVVGPLPQPSYMRDVTVERHGGPLPYYRRPVLLREYLDIDQMIFNRELPQAAGVLHHCCSYKQGGQKLLTMNS 196 (746)
T ss_dssp SSCEEEEEEEESSSSCCEEEECHHHHHSSCEEGGGSCCCHHHHHHHHHHHHHTTGGGGHHHHHHHHCTTTTCCCEEEECC
T ss_pred CCCceEEEEecCCCCCcEEEEcccCCCCCcCCcccCCCCHHHHHHHHHHHHHCHHHHHHHHHhcCCCcccCCEEEeCccc
Confidence 457899999 9999875433212 34578 99999999999999999999999998776 3322 78999966
Q ss_pred cccCCCCCceeEEEEEEEEecCCCCcccccCCCeEEEEeCC-----CcEEEEEeCCc----------------e---eeC
Q 006113 161 GWFGEERKNKRIVKMMCYYLDGTLNADMRPIEGITMTVDLD-----EMKIIQFRDRI----------------I---VPV 216 (660)
Q Consensus 161 G~~~~~~~~rRl~~~~~~~r~~~~n~YahPl~gl~~~vD~~-----~~~vv~i~d~~----------------~---~~~ 216 (660)
|..|.+ .+||++|++||.....+|+|+||| ||+++||++ +|||++|++.+ . +++
T Consensus 197 ~p~~~~-~g~R~~~~~~~r~~~~~n~Y~~Pl-g~~~~vD~~~~D~~~~~V~~i~y~g~~~~s~~el~~~~~~g~~~~~~~ 274 (746)
T 1tu5_A 197 APRGVQ-SGDRSTWFGIYYNITKGGPYLHPV-GLELLVDHKALDPADWTVQKVFFQGRYYENLAQLEEQFEAGQVNVVVI 274 (746)
T ss_dssp SSCSSS-TTCCEEEEEEEECCSSSCGGGSEE-EEEEEEECCSSSGGGCEEEEEEETTEEESSHHHHHHHHHTTCCCCCCC
T ss_pred cCCcCC-CCcEEEEEEEEEecCCCCccccce-eeEEEEeCCCCCcccCEEEEEEECCCccCchhhhhcccccCCcccccC
Confidence 644432 469999999975543489999999 799999997 79999998543 1 122
Q ss_pred CCCCCCCCccCc--CCCC-CCCCCCCceeeCCCCCeeEEeccEEeeeceEEEEeecCCCceeEEeeEEeCCCCCcceEEE
Q 006113 217 PKSDGTEYRESK--LKPP-FRPSLKRTTVVQPDGPSFNIVGSQIRWADWEFHLSFDARAGMIISVASIYDPEKQQSRQVL 293 (660)
Q Consensus 217 p~~~~~~y~~~~--~~~~-~r~~lkp~~i~QPeG~sf~v~g~~V~W~~W~f~~gf~~reGlvL~~v~~~D~~~~~~r~I~ 293 (660)
|. +|.+.. .... .|.++ ||+|+||||+||+|+|+.|+||||+||||||+|||||||||+|+ +|||+
T Consensus 275 p~----~~~~~~~~~~~~~~r~~~-p~~i~QPeG~sF~v~g~~V~W~~W~f~vgf~~reGlvL~dv~y~------gr~V~ 343 (746)
T 1tu5_A 275 PD----DGTGGFWSLKSQVPPGPT-PPLQFHPQGPRFSVQGNRVASSLWTFSFGLGAFSGPRVFDVRFQ------GERLA 343 (746)
T ss_dssp CC---------------------------------CEEEETTEEEESSEEEEEEEETTTEEEEEEEEET------TEEEE
T ss_pred cc----ccCcccccccccccCCCC-CcceeCCCCCCEEecCCcccCCCcEEEEecCCCCceEEEeeEEC------CeeEE
Confidence 21 243332 2211 25555 99999999999999999999999999999999999999999984 39999
Q ss_pred EeeeeeeEEeecCCCCcccccceeeecCCCCCCcCCCCCCCCCCCCCCcEEeeeEEecCCCceeEecceEEEeEeeCCCc
Q 006113 294 YKGHVSELFVPYMDLTEEWYYRSFFDVGEYGYGLSSLPLEPLRDCPPNAVFMDAYFAKNDGMPLKMPNVFCIFERYAGDV 373 (660)
Q Consensus 294 yrlsl~Em~vpYgdp~~~~~~k~~fD~geyG~G~~a~~L~~G~DCpg~~~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~ 373 (660)
||+|||||+||||||+|.+.+|+|||++ ||+|.+||+|++||||||+|+|||+++.+++|+|++++|||||||+|.|.+
T Consensus 344 YrlSl~Em~VPYgdp~p~~~~~~~~D~~-yG~G~~a~~L~~GcDCpg~i~Y~D~~~~~~~G~p~~~~naiCihE~d~G~~ 422 (746)
T 1tu5_A 344 YEISLQEAGAVYGGNTPAAMLTRYMDSG-FGMGYFATPLIRGVDCPYLATYMDWHFVVESQTPKTLHDAFCVFEQNKGLP 422 (746)
T ss_dssp EEEEEEEEEEEECCSSHHHHHCEEEGGG-TCTTTTBCCCCBTTTBCTTSEEEEEEEEESSSSCEEEEEEEEEEEEEEEEE
T ss_pred EEEEeeeEEeecCCCCchhhcceeeccc-cCcccccccCccCCCCCCCCEEEeeEEecCCCCEEEcCCeEEEEEeeCCee
Confidence 9999999999999999999999999986 999999999999999999999999999999999999999999999995546
Q ss_pred eeccccCCCCcceEeeeeeceEEEEEEeeeeccccceEEEEEeeCccEEEEEeEeeeeeeeeccccCCCCccccccccee
Q 006113 374 MWRHTEATDPEKLIREVRPEVSLVVRTVSTVGNYDYINDWEFKQSGSIKVTVGLTGMLEVRGTNYTHKDQIEEDVYGTLI 453 (660)
Q Consensus 374 l~kH~~~~~~~~~~~~~r~~~~LVvr~i~TVgNYdY~~~w~F~~DGtIe~ev~aTGil~~~~~~~~~~~~~~~~~yGt~V 453 (660)
||||++.+..+ .+.+||+++||||+|+|||||||||+|+|||||+||+||+|||||++..+ .. .+.+|||+|
T Consensus 423 lwkH~~~~~~~--~~~v~r~r~LVvr~i~TVgNYdYi~~w~F~qdG~Ie~ev~aTGil~t~~~--~~----~~~~yGt~V 494 (746)
T 1tu5_A 423 LRRHHSDFLSH--YFGGVAQTVLVFRSVSTMLNADYVWDMVFYPNGAIEVKLHATGYISSAFL--FG----AARRYGNQV 494 (746)
T ss_dssp EEECCCSTTCC--CCCEEEEEEEEEEEEEEETTEEEEEEEEECTTSCEEEEEEEEECCCCEEC--CT----TGGGGEEEE
T ss_pred eeeecccccCC--ceeeecccEEEEEEEEeecccceEEEEEEecCCcEEEEEEecceEeeeec--CC----CCCCCccee
Confidence 99999943321 23455566999999999999999999999999999999999999997653 11 236899999
Q ss_pred ccCcccccceeeEEeeeecCCCCCCCceEEEEEEEeecCCCCCCccee-----EEEEEEEeechhhHhhhcCC-CCcEEE
Q 006113 454 AENTIGVRHDHFLTYRLDLDVDGDANSFVKSKLRTVRVNDHGSPRKSY-----WTVDRETARTESAARIKLGS-EPVDLL 527 (660)
Q Consensus 454 ~~~~~~~~HqH~f~~RlD~dIdG~~Nsv~~~d~v~~~~~~~~np~~~~-----~~~~~~~l~tE~~a~~~~~~-~~r~~~ 527 (660)
+|+++|++|||+|||||||||||.+|||+++|+++++.+ ||++++ |++++++++||++|+++++. ++|+|
T Consensus 495 ~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~---np~~~~~~~~~~~~~~t~~~tE~~a~~~~~~~~~r~~- 570 (746)
T 1tu5_A 495 GEHTLGPVHTHSAHYKVDLDVGGLENWVWAEDMAFVPTA---IPWSPEHQIQRLQVTRKQLETEEQAAFPLGGASPRYL- 570 (746)
T ss_dssp ETTEEEECEEEEEEEEEEECTTSSEEEEEEEEEEEEEEE---ETTEEEEEEEEEEEEEEECCBGGGGEEETTSCCCSEE-
T ss_pred cCCccccccceEEEEEecccccCCCCEEEEEeeEEcccC---CCCCcccccceeEEEEEEeeehhhhccccCCCCceEE-
Confidence 999999999999999999999999999999999999874 899998 99999999999999999999 89999
Q ss_pred EecCCCCCCCCCceeEEEeeCCCcCcCCCCCChhhhcccccccceEEeeecCCccCCCCcCCCCCCCCC--ChhhhccCC
Q 006113 528 FVNPNKKTKMGNLIGYRLVPYGVVGPLLSDDDYPQIRAAFTNYNAWVTAYNISEKWAGGLYADQSRGDD--TLSVWSKRN 605 (660)
Q Consensus 528 ivN~~~~N~~G~p~gY~l~p~~~~~~~~~~~s~~~~ra~fa~~~lwVT~y~~~E~~asg~y~~q~~~~~--~l~~~~~~~ 605 (660)
|+|++++|++|+|+||||+|+++++++++++|...+||+||+|+||||||+|+|+||||.|++|+.+++ +|++|+ +|
T Consensus 571 ivn~~~~N~~G~p~gYkl~p~~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~aag~ynq~~~~~~~~~~~~~~-~~ 649 (746)
T 1tu5_A 571 YLASKQSNKWGHPRGYRIQTVSFAGGPMPQNSPMERAFSWGRYQLAITQRKETEPSSSSVFNQNDPWTPTVDFSDFI-NN 649 (746)
T ss_dssp EEEEEEECTTSCEEEEEEEEECBCCCCCCTTSTTGGGGGGGGEEEEEEECCTTCCCSSCTTTTTCTTSCSCCGGGGC-SC
T ss_pred EeCCCCcCCCCCcceEEECcCCcccccCCCcchhhccccccccceEEeccCCCcccCCccccccCCCCCCccHhhhc-CC
Confidence 999999999999999999999999999999999999999999999999999999999999977777665 478999 99
Q ss_pred CceecCCeEEEEEecceeCCCCCCCCCc--ccccceeEEEeCCCCCCCCCCCCCCC
Q 006113 606 RSIENKDIVLWYTLGFHHVPCQEDFPVM--PTFNGGFELRPSNFFESNPVLKVVPP 659 (660)
Q Consensus 606 e~i~~~DlV~W~t~G~~HvPr~ED~Pvm--p~~~~~f~L~P~nFFd~nP~ldvP~~ 659 (660)
|+|+|||||+|||||+||+||+|||||| |++++||+|||+|||++||+||+|++
T Consensus 650 e~I~n~DiV~W~t~G~~HiPr~ED~PvM~tp~~~~gf~LrP~nFF~~nP~ld~p~~ 705 (746)
T 1tu5_A 650 ETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDQEPSMDSADS 705 (746)
T ss_dssp CBCSSEEEEEEEEEEEEECCCGGGSSCBCCCSCCEEEEEEEESSSSSSCCCC----
T ss_pred CCccCCceEEEEecccccCCChhccCccCCCccEEEEEEEeCCCCCCCCcccCCCc
Confidence 9999999999999999999999999999 88999999999999999999999986
No 7
>1w7c_A Lysyl oxidase; AMNE oxidase, copper, oxidoreductase, quinoprotein, topaquinone enzyme, TPQ; HET: BMA NAG TPQ IMD; 1.23A {Pichia pastoris} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 PDB: 1rky_A* 1n9e_A*
Probab=100.00 E-value=9.5e-164 Score=1396.07 Aligned_cols=605 Identities=21% Similarity=0.322 Sum_probs=529.9
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhhC-CC------CCCceEEEEEEccCCChHhhHhhhhcCCCCCCCCEeEEEEEeC--
Q 006113 22 SHQYHPLDSLTPSEFTQIQSIVTKAY-PK------STYNLTFQYVGLKEPTKQTVLSWLRNETTTNPPRQAFVVARID-- 92 (660)
Q Consensus 22 ~~~~HPLdpLs~~Ei~~a~~~l~~~~-~~------~~~~~~f~~I~L~EP~K~~vl~~l~~~~~~~p~R~A~vv~~~~-- 92 (660)
...+|||||||++||++|+++|+++. +. ..+| .|++|+|.||+|++||+||+++ +++|+|+|+|+++++
T Consensus 15 ~~~~~p~~~Ls~~E~~aV~~~L~~~l~l~~~~~~~~~dN-~i~~VeL~~P~K~~vL~~Ld~~-g~~P~R~A~vv~~~~~~ 92 (747)
T 1w7c_A 15 APKTNIWTSLAKEEVQEVLDLLHSTYNITEVTKADFFSN-YVLWIETLKPNKTEALTYLDED-GDLPPRNARTVVYFGEG 92 (747)
T ss_dssp CSSCCTTCCCCHHHHHHHHHHHHHHSCCCCGGGCCTTSE-EEEEEEEECCCHHHHHHHHHSC-CCCCCCEEEEEEEECSS
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhccCCCccccCccccc-eEEEEECcCCCHHHHHhHhhCC-CCCCCceEEEEEEeCCC
Confidence 34579999999999999999999883 11 1234 8999999999999999999987 467899999999884
Q ss_pred --CeeEEEEEE-CCCCeEEEEeeeC---CC---CCC----CCCHHHHHHHHHHHhcChHHHHHH------HhcC-CCCCc
Q 006113 93 --HQTHEIIVD-LSLQGITSKKTYN---GY---GYP----LLTGEEQEDANKLASTYPLFVASI------SKRG-LKLEE 152 (660)
Q Consensus 93 --~~~~E~iV~-L~~~~v~~~~~~~---~~---~~p----~~~~eE~~~~e~~~~~~p~~~~a~------~~~G-i~~~~ 152 (660)
+.++|++|+ |+.+++++++.++ +. .+| +++.+|+.+++++|+ .+++++ +++| +....
T Consensus 93 ~~~~~~E~vV~PL~~~~v~~~~~~~~~~~~g~~~~p~~~r~~~~~E~~~~e~~~~---~~~~~~~~~~l~~~~g~~~~~~ 169 (747)
T 1w7c_A 93 EEGYFEELKVGPLPVSDETTIEPLSFYNTNGKSKLPFEVGHLDRIKSAAKSSFLN---KNLNTTIMRDVLEGLIGVPYED 169 (747)
T ss_dssp SSCEEEEEEEESSSCCTTCEEEECCTTCTTCCSEEEGGGCCCCHHHHHHHHHHHH---HHHTSHHHHHHHHHHHSSCGGG
T ss_pred CCCceEEEEEcCCCCCcEEEEEeccccCCCCcccCCcccCCCCHHHHHHHHHHHH---HHHHHHhhccchhhcCCcccce
Confidence 557899999 9999998887773 33 358 899999999999999 777766 6688 74433
Q ss_pred eEEcccccccc--CCCCCceeEEEEEEEEecCCCCcccccCCCeEEEEeCC-----CcEEEEEeCCc-------------
Q 006113 153 VVCGSFTVGWF--GEERKNKRIVKMMCYYLDGTLNADMRPIEGITMTVDLD-----EMKIIQFRDRI------------- 212 (660)
Q Consensus 153 v~~d~w~~G~~--~~~~~~rRl~~~~~~~r~~~~n~YahPl~gl~~~vD~~-----~~~vv~i~d~~------------- 212 (660)
|++|++|.. |. ..+||++|++||.....+|+|+||| ||+++||++ +|||++|++.+
T Consensus 170 --l~~w~~~~~~~~~-~~g~R~~~~~~~r~~~~~n~Y~~Pl-g~~~~vD~~~~D~~~~~V~~v~~~g~~~~s~~el~~~~ 245 (747)
T 1w7c_A 170 --MGCHSAAPQLHDP-ATGATVDYGTCNINTENDAENLVPT-GFFFKFDMTGRDVSQWKMLEYIYNNKVYTSAEELYEAM 245 (747)
T ss_dssp --EEEEECSSCEECT-TTCCEEEEEEEEECCSSSCGGGCEE-EEEEEEECCSSCGGGCEEEEEEETTEEESSHHHHHHHH
T ss_pred --eeeecccCCcCCC-CCCceEEEEEEEEecCCCCccccce-eeEEEEeCCCCCcccCEEEEEEECCcccCchhhhhhhh
Confidence 888987743 32 2469999999975543389999999 799999997 69999986542
Q ss_pred ----ee---eCCCCCCCCCccCcCC-C--CCCCCCCCceeeCCCCCeeEEeccE--EeeeceEEEEeecCCCceeEEeeE
Q 006113 213 ----IV---PVPKSDGTEYRESKLK-P--PFRPSLKRTTVVQPDGPSFNIVGSQ--IRWADWEFHLSFDARAGMIISVAS 280 (660)
Q Consensus 213 ----~~---~~p~~~~~~y~~~~~~-~--~~r~~lkp~~i~QPeG~sf~v~g~~--V~W~~W~f~~gf~~reGlvL~~v~ 280 (660)
.+ ++|......|.+.... + +.|+++|||+|+||||+||+|+|+. |+||+|+||||||+|||||||||+
T Consensus 246 ~~~g~v~~~~~p~~~~~~~~~~~~~~g~~~~r~~lkp~~i~QPeG~sF~v~g~~~yV~W~~W~f~vgf~~reGlvL~dv~ 325 (747)
T 1w7c_A 246 QKDDFVTLPKIDVDNLDWTVIQRNDSAPVRHLDDRKSPRLVEPEGRRWAYDGDEEYFSWMDWGFYTSWSRDTGISFYDIT 325 (747)
T ss_dssp HSTTCCCCCCCCTTCCGGGCCSCCTTSCCCTTTTSCCCCCCCTTCCCCEEETTTTEEEETTEEEEEEEETTTEEEEEEEE
T ss_pred cccCcccccccCCCCCcccchhhcccCCCCcccCCCCCcccCCCCCCEEEeCCccceeccCCeEEEecCCCCceEEEeee
Confidence 11 2331111112222322 2 4689999999999999999999999 999999999999999999999999
Q ss_pred EeCCCCCcceEEEEeeeeeeEEeecCCCCcccccceeeecCCCCCCcCCCCCCCCCCCCCCcEEeeeEEecCCCceeEec
Q 006113 281 IYDPEKQQSRQVLYKGHVSELFVPYMDLTEEWYYRSFFDVGEYGYGLSSLPLEPLRDCPPNAVFMDAYFAKNDGMPLKMP 360 (660)
Q Consensus 281 ~~D~~~~~~r~I~yrlsl~Em~vpYgdp~~~~~~k~~fD~geyG~G~~a~~L~~G~DCpg~~~YlD~~~~~~~g~p~~~~ 360 (660)
|. +|||+||+|||||+||||||++.|++|+|||+| ||+|. ||+|++||||||+|+|||+++. ++|+|++++
T Consensus 326 y~------gr~V~YrlSl~Em~VPYgdp~p~~~~~~~~D~g-yG~G~-a~~L~~GcDCpg~i~Y~D~~~~-~~G~p~~~~ 396 (747)
T 1w7c_A 326 FK------GERIVYELSLQELIAEYGSDDPFNQHTFYSDIS-YGVGN-RFSLVPGYDCPSTAGYFTTDTF-EYDEFYNRT 396 (747)
T ss_dssp ET------TEEEEEEEEEEEEEEEECCSSTTGGGCEEEHHH-HCSSS-SCCCCBTTTBCTTCEEEEEEEE-ETTEEEEEE
T ss_pred EC------CEEEEEEEEeeeEEeccCCCCchhheeeeeccc-cCccc-ccccccCCCCCCCCEEeeeEEe-cCCCeEEcC
Confidence 84 399999999999999999999999999999999 99999 9999999999999999999999 999999999
Q ss_pred ceEEEeEeeCCCceeccccCCCCcceEeeeeeceEEEEEEeeeeccccceEEEEEeeCccEEEEEeEeeeeeeeeccccC
Q 006113 361 NVFCIFERYAGDVMWRHTEATDPEKLIREVRPEVSLVVRTVSTVGNYDYINDWEFKQSGSIKVTVGLTGMLEVRGTNYTH 440 (660)
Q Consensus 361 naiCi~E~d~~g~l~kH~~~~~~~~~~~~~r~~~~LVvr~i~TVgNYdY~~~w~F~~DGtIe~ev~aTGil~~~~~~~~~ 440 (660)
|||||||+|+|.|||||+++ +. +.+||+++||||+|+|||||||||+|+|||||+||+||+|||||++..+.
T Consensus 397 naiCihE~d~G~pl~kH~~~--~~---~~v~r~r~LVvr~i~TVgNYdYif~w~F~qdG~Ie~ev~aTGil~t~~~~--- 468 (747)
T 1w7c_A 397 LSYCVFENQEDYSLLRHTGA--SY---SAITQNPTLNVRFISTIGNADYNFLYKFFLDGTLEVSVRAAGYIQAGYWN--- 468 (747)
T ss_dssp EEEEEEEEECSSCSEEEEET--TE---EEEECCEEEEEEEEECCCC-CEEEEEEECTTSCEEEEEEECBCCCCEECC---
T ss_pred ceEEEEEEeCCeeeEEeccC--Cc---ceeeeCceEEEEEEEeccccceEEEEEEecCCeEEEEEEeeEEEeccccC---
Confidence 99999999955569999998 33 34566669999999999999999999999999999999999999976531
Q ss_pred CCCcccccccceeccCcccccceeeEEeeeecCCCCCCCceEEEEEEEeecCCCCCCcce-----eEEEEEEEeechhhH
Q 006113 441 KDQIEEDVYGTLIAENTIGVRHDHFLTYRLDLDVDGDANSFVKSKLRTVRVNDHGSPRKS-----YWTVDRETARTESAA 515 (660)
Q Consensus 441 ~~~~~~~~yGt~V~~~~~~~~HqH~f~~RlD~dIdG~~Nsv~~~d~v~~~~~~~~np~~~-----~~~~~~~~l~tE~~a 515 (660)
. +.+.+|||+|+|+++|++|||+|||||||||||.+|||+++|+++++.+ ||+++ +|++++++++||++|
T Consensus 469 ~--~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~---np~~~~~~~~~~~~~~t~~~tE~~a 543 (747)
T 1w7c_A 469 P--ETSAPYGLKIHDVLSGSFHDHVLNYKVDLDVGGTKNRASQYVMKDVDVE---YPWAPGTVYNTKQIAREVFENEDFN 543 (747)
T ss_dssp T--TTCGGGCCEEETTEECCCEEEEEEEEEEECTTSSEEEEEEEEEEEEEEE---CTTSTTCEEEEEEEEEEECCBCCTT
T ss_pred C--CCcCCCcceecCCcccCccceEEEEEeccccCCCCCEEEEEeeEEcccC---CCCCcccccceeEEEEEEccchhhh
Confidence 1 1246899999999999999999999999999999999999999999874 78888 899999999999999
Q ss_pred hhhcC-C-CCcEEEEecCCCCCCCCCceeEEEeeCCC-cCcCCCCCChhhhcccccccceEEeeecCCccCCCCcCCCCC
Q 006113 516 RIKLG-S-EPVDLLFVNPNKKTKMGNLIGYRLVPYGV-VGPLLSDDDYPQIRAAFTNYNAWVTAYNISEKWAGGLYADQS 592 (660)
Q Consensus 516 ~~~~~-~-~~r~~~ivN~~~~N~~G~p~gY~l~p~~~-~~~~~~~~s~~~~ra~fa~~~lwVT~y~~~E~~asg~y~~q~ 592 (660)
+++++ . ++|+| |+|++++|++|+|+||||+|+++ ++++++++|...+||+||+|+||||||+|+|+||||+|++|+
T Consensus 544 ~~~~~~~~~~r~~-ivN~~~~N~~G~p~gYkl~p~~~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~aag~ynq~~ 622 (747)
T 1w7c_A 544 GINWPENGQGILL-IESAEETNSFGNPRAYNIMPGGGGVHRIVKNSRSGPETQNWARSNLFLTKHKDTELRSSTALNTNA 622 (747)
T ss_dssp CBCCCGGGCEEEE-EEEEEEECTTSCEEEEEEEECTTCCCCSCSSCTTCSSSCGGGGSSEEEEECCTTCCCSCCTTCTTC
T ss_pred hhcCCCCCCceEE-EeCCCccCCCCCcceEEEecCCCCcccccCCCchhhhcchhccCcEEEecCCCCccCCCCCccccC
Confidence 99999 5 69999 99999999999999999999999 999999999999999999999999999999999999997676
Q ss_pred CCCC--ChhhhccCCCceecCCeEEEEEecceeCCCCCCCCCc--ccccceeEEEeCCCCCCCCCCCCCCC
Q 006113 593 RGDD--TLSVWSKRNRSIENKDIVLWYTLGFHHVPCQEDFPVM--PTFNGGFELRPSNFFESNPVLKVVPP 659 (660)
Q Consensus 593 ~~~~--~l~~~~~~~e~i~~~DlV~W~t~G~~HvPr~ED~Pvm--p~~~~~f~L~P~nFFd~nP~ldvP~~ 659 (660)
.+++ +|++|+ +||+|+|||||+|||||+||+||+|||||| |++++||+|||+|||++||+||+|++
T Consensus 623 ~~~~~~~~~~~~-~~e~I~n~DiVlW~t~G~~HiPr~ED~PvM~tP~~~~gf~LrP~nFF~~nP~ldvp~~ 692 (747)
T 1w7c_A 623 LYDPPVNFNAFL-DDESLDGEDIVAWVNLGLHHLPNSNDLPNTIFSTAHASFMLTPFNYFDSENSRDTTQQ 692 (747)
T ss_dssp SSSCSCCGGGGC-SCCBCTTEEEEEEEEEEEEECCCGGGSSCBCSSSSEEEEEEEEESSSSSCTTTTCSSE
T ss_pred CCCCCcchhhhh-CCCccccCceEEEEecccccCCChhhcCCcCCCcceEEEEEEeCCcCCCCCCccCCCc
Confidence 6665 488999 999999999999999999999999999999 77999999999999999999999985
No 8
>3hi7_A Amiloride-sensitive amine oxidase; oxidoreductase, copper amine oxidase, topaquinone, TPQ, DIAM oxidase, DAO, human, glycoprotein, heparin-binding; HET: TPQ NAG BMA; 1.80A {Homo sapiens} PDB: 3hig_A* 3hii_A* 3k5t_A* 3mph_A*
Probab=100.00 E-value=1.5e-155 Score=1324.28 Aligned_cols=609 Identities=26% Similarity=0.373 Sum_probs=514.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhC---C------CCCCceEEEEEEccCCChHhhHhhhhcCCCCCCCCEeEEEEEeCCe-
Q 006113 25 YHPLDSLTPSEFTQIQSIVTKAY---P------KSTYNLTFQYVGLKEPTKQTVLSWLRNETTTNPPRQAFVVARIDHQ- 94 (660)
Q Consensus 25 ~HPLdpLs~~Ei~~a~~~l~~~~---~------~~~~~~~f~~I~L~EP~K~~vl~~l~~~~~~~p~R~A~vv~~~~~~- 94 (660)
+-+|++||++|+++|.++|.++. + ...+| ++.+|+|..|+|++||+|||++ +++|+|+|+|+++++++
T Consensus 10 ~~vf~dLs~~E~~~V~~~L~~~~~l~Lt~~~~a~~~dN-~i~~iEl~~P~K~~vL~~LD~~-~~~P~R~A~vvi~fG~~~ 87 (731)
T 3hi7_A 10 AGVFSDLSNQELKAVHSFLWSKKELRLQPSSTTTMAKN-TVFLIEMLLPKKYHVLRFLDKG-ERHPVREARAVIFFGDQE 87 (731)
T ss_dssp GGGGCCCCHHHHHHHHHHHHTCGGGCBCCTTSSCSSSE-EEEEEEEECCCHHHHHHHHHHC-CCCCCCEEEEEEEECSSS
T ss_pred CCccccCCHHHHHHHHHHHhcCCCCCCcccccCCccCC-eEEEEEecCCCchhhhhhhcCC-CCCCCcceEEEEEcCCCC
Confidence 35699999999999999999874 1 33467 8999999999999999999997 57899999999999644
Q ss_pred ---eEEEEE-ECCCCeEEEEeeeCCCCC------CCCCHHHHHHHHHHHhc-----ChHHHHHHHhcCCCCCceEEccc-
Q 006113 95 ---THEIIV-DLSLQGITSKKTYNGYGY------PLLTGEEQEDANKLAST-----YPLFVASISKRGLKLEEVVCGSF- 158 (660)
Q Consensus 95 ---~~E~iV-~L~~~~v~~~~~~~~~~~------p~~~~eE~~~~e~~~~~-----~p~~~~a~~~~Gi~~~~v~~d~w- 158 (660)
..|++| +|+.++.++..+ ++.+. .+++.-|+.++.+++.+ ...+++.+ ...++.+.-.|+.+
T Consensus 88 ~P~v~Ey~VGPLP~p~~~~~l~-~~~~~~~p~~~R~~~~~e~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~cL~~~ 165 (731)
T 3hi7_A 88 HPNVTEFAVGPLPGPCYMRALS-PRPGYQSSWASRPISTAEYALLYHTLQEATKPLHQFFLNTT-GFSFQDCHDRCLAFT 165 (731)
T ss_dssp SCEEEEEEEECSSSCCEEEEES-CCTTCCCHHHHSCCCHHHHHHHHHHHHHHTGGGHHHHHHHH-SCBSSSCSSSBEEEE
T ss_pred CCeeEEEEEcCCCCCCeeeecc-cCCCCcCCcccCCCcHHHHHHHHHHHHHHHhHHHHHHHHHh-CceecCCCCCEEeee
Confidence 569999 799988776655 33332 23555577777666443 23333333 12233323234332
Q ss_pred ---cccccCCCCCceeEEEEEEEEecCCCCcccccCCCeEEEEeCC-----CcEEEEEe-----------------CCce
Q 006113 159 ---TVGWFGEERKNKRIVKMMCYYLDGTLNADMRPIEGITMTVDLD-----EMKIIQFR-----------------DRII 213 (660)
Q Consensus 159 ---~~G~~~~~~~~rRl~~~~~~~r~~~~n~YahPl~gl~~~vD~~-----~~~vv~i~-----------------d~~~ 213 (660)
|.| .+.++||.| +.|+|..+ ++|.||+ ||+++||+. .|+|.+|- ++.+
T Consensus 166 ~~~P~~---~~sg~r~~W--~~~~~~~~-g~~l~P~-gl~~~vDh~~~Dps~W~v~~v~Yng~~y~s~eel~~~y~~g~~ 238 (731)
T 3hi7_A 166 DVAPRG---VASGQRRSW--LIIQRYVE-GYFLHPT-GLELLVDHGSTDAGHWAVEQVWYNGKFYGSPEELARKYADGEV 238 (731)
T ss_dssp ECSSCS---SSTTCCEEE--EEEEECST-TGGGCEE-EEEEEEECCSSSGGGCEEEEEEETTEECSSHHHHHHHHHTTCC
T ss_pred cCCCCc---cCCCCEEEe--hheeccCC-Cceeecc-ceEEEEecCCCChHHcEEEEEEECCEecCCHHHHHHHHhCCCe
Confidence 444 223467776 67788765 6899999 899999998 67888874 1222
Q ss_pred --e--eCCCCCC---------CCCccCcCCC--CCCCCCCCceeeCCCCCeeEEeccEEeeeceEEEEeecCCCceeEEe
Q 006113 214 --V--PVPKSDG---------TEYRESKLKP--PFRPSLKRTTVVQPDGPSFNIVGSQIRWADWEFHLSFDARAGMIISV 278 (660)
Q Consensus 214 --~--~~p~~~~---------~~y~~~~~~~--~~r~~lkp~~i~QPeG~sf~v~g~~V~W~~W~f~~gf~~reGlvL~~ 278 (660)
+ +.|..++ ..|..-.+++ ..++++|||+|+||||+||+|+|++|+||||+||||||+||||||||
T Consensus 239 ~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~~~~~kp~~i~QPeG~sF~V~g~~V~W~~W~F~vgfn~reGlvL~d 318 (731)
T 3hi7_A 239 DVVVLEDPLPGGKGHDSTEEPPLFSSHKPRGDFPSPIHVSGPRLVQPHGPRFRLEGNAVLYGGWSFAFRLRSSSGLQVLN 318 (731)
T ss_dssp CCCCCCCCC----------CCCCTTSCCCCSCCSBCCCSCCCEEECTTCCSSEEETTEEEEBTEEEEEEEETTTEEEEEE
T ss_pred eEeccCCCCCcccccccccccccccccccCCCCCCCCCCCCcceeCCCCCCEEEeCCEEEecCcEEEEecCCCCCcEEEe
Confidence 1 1222222 0132222333 34789999999999999999999999999999999999999999999
Q ss_pred eEEeCCCCCcceEEEEeeeeeeEEeecCCCCcccccceeeecCCCCCCcCCCCCCCCCCCCCCcEEeeeEEecCCCceeE
Q 006113 279 ASIYDPEKQQSRQVLYKGHVSELFVPYMDLTEEWYYRSFFDVGEYGYGLSSLPLEPLRDCPPNAVFMDAYFAKNDGMPLK 358 (660)
Q Consensus 279 v~~~D~~~~~~r~I~yrlsl~Em~vpYgdp~~~~~~k~~fD~geyG~G~~a~~L~~G~DCpg~~~YlD~~~~~~~g~p~~ 358 (660)
|+|+| |||+||+|||||+||||||+++|++|+|||+| ||+|.+||+|++||||||+|+|||+++.+++|+|++
T Consensus 319 V~y~g------r~v~YrlSlsEm~VpYgdp~p~~~~k~~fD~G-yG~G~~an~L~lGcDCpg~i~YlD~~~~~~~G~p~~ 391 (731)
T 3hi7_A 319 VHFGG------ERIAYEVSVQEAVALYGGHTPAGMQTKYLDVG-WGLGSVTHELAPGIDCPETATFLDTFHYYDADDPVH 391 (731)
T ss_dssp EEETT------EEEEEEEEEEEEEEEECCSSHHHHHCEEEGGG-GTGGGCCCCCCBTTTBCTTSEEEEEEEEESCSSCEE
T ss_pred EEECC------eeEEEEeeeeeeEEccCCCCCccccceeeecC-cCccccccccccCCCCCCCCEEEeeEEecCCCCEEe
Confidence 99965 89999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred ecceEEEeEeeCCCceecccc--CCCCcceEeeeeeceEEEEEEeeeeccccceEEEEEeeCccEEEEEeEeeeeeeeec
Q 006113 359 MPNVFCIFERYAGDVMWRHTE--ATDPEKLIREVRPEVSLVVRTVSTVGNYDYINDWEFKQSGSIKVTVGLTGMLEVRGT 436 (660)
Q Consensus 359 ~~naiCi~E~d~~g~l~kH~~--~~~~~~~~~~~r~~~~LVvr~i~TVgNYdY~~~w~F~~DGtIe~ev~aTGil~~~~~ 436 (660)
++|||||||+|.|.++|||++ ++++ ..++.+|++++||||+|+|||||||||+|+|||||+||+||||||||++...
T Consensus 392 ~~naICihE~d~Gi~~~kHtd~~~r~~-~~~~~~~r~r~LVvr~I~TVgNYDYif~w~F~qdGsIe~eVraTGilst~~~ 470 (731)
T 3hi7_A 392 YPRALCLFEMPTGVPLRRHFNSNFKGG-FNFYAGLKGQVLVLRTTSTVYNADYIWDFIFYPNGVMEAKMHATGYVHATFY 470 (731)
T ss_dssp EEEEEEEEEEECSSCSEEEEEECSSSS-EEEEEEECCEEEEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEECCCEEEC
T ss_pred cCCEEEEEEeeCCeeEEEecccccCCc-cceeecccccEEEEEEeeecccccEEEEEEEecCCeEEEEEEEEEEEeeccc
Confidence 999999999996666899975 4543 2345677888999999999999999999999999999999999999997654
Q ss_pred cccCCCCcccccccceeccCcccccceeeEEeeeecCCCCCCCceEEEEEEEeecCCCCCCcc--eeEEEEEEEeechhh
Q 006113 437 NYTHKDQIEEDVYGTLIAENTIGVRHDHFLTYRLDLDVDGDANSFVKSKLRTVRVNDHGSPRK--SYWTVDRETARTESA 514 (660)
Q Consensus 437 ~~~~~~~~~~~~yGt~V~~~~~~~~HqH~f~~RlD~dIdG~~Nsv~~~d~v~~~~~~~~np~~--~~~~~~~~~l~tE~~ 514 (660)
. . .+.+|||+|+|+++|++|||+|||||||||||.+|||+++|+++++.+.|++|.. +++++++++++||++
T Consensus 471 ~---~---~~~~yGt~V~p~v~a~~HqH~f~~RlD~dIDG~~Nsv~~~d~~~~~~~nP~~~~~~~~~~~~~~t~l~tE~e 544 (731)
T 3hi7_A 471 T---P---EGLRHGTRLHTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLENITNPWSPRHRVVQPTLEQTQYSWERQ 544 (731)
T ss_dssp C---G---GGGGSEEEEETTEEEECEEEEEEEEEEECTTSSEEEEEEEEEEEEEEECTTCTTSEEEEEEEEEEEECBGGG
T ss_pred C---C---CCCCCcceecCCcccccceeEEEEEeccccCCCCCEEEEEeceecCCCCCCCCCccceeEEEEEEEccchhh
Confidence 1 1 2368999999999999999999999999999999999999999998876777764 568999999999999
Q ss_pred HhhhcCC-CCcEEEEecCCCCCCCCCceeEEEeeCCCcCcCCCCCChhhhcccccccceEEeeecCCccCCCCcCCCCCC
Q 006113 515 ARIKLGS-EPVDLLFVNPNKKTKMGNLIGYRLVPYGVVGPLLSDDDYPQIRAAFTNYNAWVTAYNISEKWAGGLYADQSR 593 (660)
Q Consensus 515 a~~~~~~-~~r~~~ivN~~~~N~~G~p~gY~l~p~~~~~~~~~~~s~~~~ra~fa~~~lwVT~y~~~E~~asg~y~~q~~ 593 (660)
|++++++ ++|+|+|+|+ ++|++|+|+||||+|++.+..++.++|...+||+||+|+||||||+|+|+||||+|++|++
T Consensus 545 a~~~~~~~~~R~~~i~N~-~~N~~G~pvgYkl~p~~~~~~~l~~~s~~~rra~fa~~~lwVT~y~d~E~~aag~y~~~s~ 623 (731)
T 3hi7_A 545 AAFRFKRKLPKYLLFTSP-QENPWGHKRSYRLQIHSMADQVLPPGWQEEQAITWARYPLAVTKYRESELCSSSIYHQNDP 623 (731)
T ss_dssp GCBCTTSCCCSEEEEEEE-EECTTSCEEEEEEEEECCCCCCSCTTSGGGGGGGGGGCSEEEEECCGGGSCSCCTTTTTCS
T ss_pred hhhccCCCCceEEEEeCC-CcCCCCCceeEEEccCCccccccCCcchhhhhchhcccceEEecCCCCccCCCccccccCC
Confidence 9999999 9999999999 8899999999999998877777779999999999999999999999999999999999988
Q ss_pred CCC--ChhhhccCCCceecCCeEEEEEecceeCCCCCCCCCc--ccccceeEEEeCCCCCCCCCCCCCCC
Q 006113 594 GDD--TLSVWSKRNRSIENKDIVLWYTLGFHHVPCQEDFPVM--PTFNGGFELRPSNFFESNPVLKVVPP 659 (660)
Q Consensus 594 ~~~--~l~~~~~~~e~i~~~DlV~W~t~G~~HvPr~ED~Pvm--p~~~~~f~L~P~nFFd~nP~ldvP~~ 659 (660)
+++ ||++|+++||+|+|||||+|+|||+||+||+|||||| |++++||+|||+||||+||+||+|+.
T Consensus 624 ~~~~~gl~~w~~~~e~I~n~DiV~W~t~G~~HiPr~ED~PvMptp~e~~~f~LrP~nFFd~nPalds~~~ 693 (731)
T 3hi7_A 624 WDPPVVFEQFLHNNENIENEDLVAWVTVGFLHIPHSEDIPNTATPGNSVGFLLRPFNFFPEDPSLASRDT 693 (731)
T ss_dssp SSCSCCTTHHHHTCCBCSSEEEEEEEEEEEEECCCGGGSSCBCSTTCEEEEEEEEESSSSSCGGGGCTTC
T ss_pred CCCCCCHHHHhhCCCceecCceEEEEecccccCCChhhcCccccccceeEEEEEccCCCCCCccccCcce
Confidence 774 7999999999999999999999999999999999999 55899999999999999999999974
No 9
>3pgb_A Putative uncharacterized protein; oxidoreductase, copper amine oxidase, CAO, topaquinone, TPQ; HET: TPQ NAG BMA MAN; 2.45A {Emericella nidulans}
Probab=100.00 E-value=1.7e-153 Score=1308.52 Aligned_cols=610 Identities=22% Similarity=0.350 Sum_probs=504.6
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHhhCC---------CCCCceEEEEEEccCCChHhhHhhhhcCCCCCCCCEeEEEEE
Q 006113 20 IPSHQYHPLDSLTPSEFTQIQSIVTKAYP---------KSTYNLTFQYVGLKEPTKQTVLSWLRNETTTNPPRQAFVVAR 90 (660)
Q Consensus 20 ~~~~~~HPLdpLs~~Ei~~a~~~l~~~~~---------~~~~~~~f~~I~L~EP~K~~vl~~l~~~~~~~p~R~A~vv~~ 90 (660)
..++...+|++||++|+++|+++|.++.. ...+| ++.+|+|..|+|++||+|||++ +++|+|+|+|+++
T Consensus 60 ~~ap~~~vfadLs~~E~~aV~~~L~~~~~l~Lt~~~~a~~~dN-~i~~iEl~~P~K~~vL~~LD~~-~~~P~R~A~vvi~ 137 (797)
T 3pgb_A 60 IKAPKENVWYGLTDDETADVAKWLFGRPELNLTTTENAGEWDN-TIALIELHRPNKSEAIPYLDGS-GPAPTRHAHVRLN 137 (797)
T ss_dssp CCCSSCCSSSCCCHHHHHHHHHHHHTCTTTCCCCTTTCCSSSE-EEEEEEEECCCHHHHHHHHHC----CCCCEEEEEEE
T ss_pred ccCCCCCcccccCHHHHHHHHHHHhcCCCCCCcccccCCccCC-eEEEEEeeCCCHHHHHHhhcCC-CCCCCeeEEEEEE
Confidence 34556799999999999999999998751 33467 8999999999999999999997 5789999999999
Q ss_pred eCCe----eEEEEE-ECCCC--eEEEEeeeC---CC-C-----CCCCCHHHHHHHHHHHhcChHHHHHHHh---cCCCCC
Q 006113 91 IDHQ----THEIIV-DLSLQ--GITSKKTYN---GY-G-----YPLLTGEEQEDANKLASTYPLFVASISK---RGLKLE 151 (660)
Q Consensus 91 ~~~~----~~E~iV-~L~~~--~v~~~~~~~---~~-~-----~p~~~~eE~~~~e~~~~~~p~~~~a~~~---~Gi~~~ 151 (660)
++++ ..|++| +|+.+ +.++..+.+ +. + ..+++..|+..+.+++++--.....+-. .|.+.+
T Consensus 138 fG~~~~P~v~Ey~VGPLP~p~~t~~~~l~~~y~~~~~g~~~~~~r~~~~~e~~~l~~~~~~~~~~~~~l~~~t~~~~~~~ 217 (797)
T 3pgb_A 138 NRATTDPYFADILVGPLPVSNATTWEPLEFPYTRKTQGQVRNVEPDGETVYSEWLFKISASIADITLDLWNGTALGLEND 217 (797)
T ss_dssp ECSSSSCEEEEEEEESSSCSTTCEEEECCTTCSSCSTTEEECSCCCTTHHHHTTHHHHHHHTHHHHHHHHSCCCSSSTTC
T ss_pred cCCCCCCceEEEEEcCCCCCCcceeEEccccccCCCCCCCCcccCcchhhHHHHHHHHHHHHHHHHHHHhhcccccCCCC
Confidence 9643 569999 69977 666655541 11 1 1224555777777766554333333322 222222
Q ss_pred ceE-EccccccccCCCCCceeEEEEEEEEecCC---CCcccccCCCeEEEEeCC-----CcEEEEEe-------------
Q 006113 152 EVV-CGSFTVGWFGEERKNKRIVKMMCYYLDGT---LNADMRPIEGITMTVDLD-----EMKIIQFR------------- 209 (660)
Q Consensus 152 ~v~-~d~w~~G~~~~~~~~rRl~~~~~~~r~~~---~n~YahPl~gl~~~vD~~-----~~~vv~i~------------- 209 (660)
.+. .+.-|.| ..+++|+. +++|+|... +++|.||+ ||+++||+. .|+|.+|-
T Consensus 218 ~L~~~~~~P~g---~~sg~r~~--W~~~~~~~~g~~d~~~lhP~-gl~~lvDh~~~Dps~W~v~~v~Yng~~y~s~eel~ 291 (797)
T 3pgb_A 218 TLDIWGIDPLW---QDDGRIIR--WDMFWNMADDEFDSETLLPL-GLYLKSDVTGRDPSQWKLLGWMYNDIFYETTEEFR 291 (797)
T ss_dssp CEEEEECSSCB---CSTTCCEE--EEEEEECCCTTCCCGGGCEE-EEEEEEECCSSCGGGCEEEEEEETTEEESSHHHHH
T ss_pred eEeeeccCCCC---cCCCCEEE--eeeeeccCCCccccceeecc-ceEEEEecCCCChhHcEEEEEEECCEecCCHHHHH
Confidence 222 2222444 22234554 478888643 46999999 899999999 67888874
Q ss_pred ----CCceee-CCCCCCCCCccCcCCC--CCCCCCCCceeeCCCCCeeEEe--ccEEeeeceEEEEeecCCCceeEEeeE
Q 006113 210 ----DRIIVP-VPKSDGTEYRESKLKP--PFRPSLKRTTVVQPDGPSFNIV--GSQIRWADWEFHLSFDARAGMIISVAS 280 (660)
Q Consensus 210 ----d~~~~~-~p~~~~~~y~~~~~~~--~~r~~lkp~~i~QPeG~sf~v~--g~~V~W~~W~f~~gf~~reGlvL~~v~ 280 (660)
++.... .|..++ .|....+++ +.|+++|||+|+||||+||+|+ |++|+||||+||||||+||||+||||+
T Consensus 292 ~~y~~g~~~~~~~~~~g-~ws~~~~~g~~~~~~~lkP~~i~QPeGpsF~V~g~g~~V~W~~W~F~vgfn~ReGlvL~dV~ 370 (797)
T 3pgb_A 292 KAYWSPGFVKLKPNVDG-AWAHTEQRGPVPPQDRKQPPVMIAPDGARYSVDAERKYVTWMDFSFYIAFNRDTGLSLFDIK 370 (797)
T ss_dssp HHHTSTTCCCCCCCCCC-GGGCCSCCSCCCTTTTSCCCCCCCTTCCCSEEETTTTEEEETTEEEEEEEETTTEEEEEEEE
T ss_pred HHHhCCCeeecCCCCCC-cccccccCCCCCCcCCCCCceeeCCCCCCEEEecCCCEEEeCCcEEEEecCCCCceEEEccc
Confidence 122222 222323 554222222 4478999999999999999998 799999999999999999999999999
Q ss_pred EeCCCCCcceEEEEeeeeeeEEeecCCCCcccccceeeecCCCCCCcCCCCCCCCCCCCCCcEEeeeEEecCCCceeEec
Q 006113 281 IYDPEKQQSRQVLYKGHVSELFVPYMDLTEEWYYRSFFDVGEYGYGLSSLPLEPLRDCPPNAVFMDAYFAKNDGMPLKMP 360 (660)
Q Consensus 281 ~~D~~~~~~r~I~yrlsl~Em~vpYgdp~~~~~~k~~fD~geyG~G~~a~~L~~G~DCpg~~~YlD~~~~~~~g~p~~~~ 360 (660)
|+| |||+||+|||||+|||||++|.+.+++||| ||||+|.+||+|++||||||+|+|||+++.++ |+|++++
T Consensus 371 y~g------r~V~YrlSlsEm~VPYg~~~P~~~~~af~D-~eyG~G~~an~L~lGcDCpg~i~YlD~~~~~~-~~p~~~~ 442 (797)
T 3pgb_A 371 YKG------QRVLYELGLQEALAHYAANDPVQSSVAYLD-SYYGFGPYAFELLKGYDCPSYASYLNTSFYKD-EETHTHV 442 (797)
T ss_dssp ETT------EEEEEEEEEEEEEEEECCSSHHHHHCEEEG-GGTCSGGGCCCCCBTTTBCTTCEEEEEEEEET-TEEEEEE
T ss_pred cCC------eeEEEEeEeeeeEEeCCCCChhhhcceeee-cccCCccccccCccCCCCCCCCEEeeeEEecC-CCceEec
Confidence 854 899999999999999999987777666777 59999999999999999999999999999987 6789999
Q ss_pred ceEEEeEeeCCCceeccccCCCCcceEeeeeeceEEEEEEeeeeccccceEEEEEeeCccEEEEEeEeeeeeeeeccccC
Q 006113 361 NVFCIFERYAGDVMWRHTEATDPEKLIREVRPEVSLVVRTVSTVGNYDYINDWEFKQSGSIKVTVGLTGMLEVRGTNYTH 440 (660)
Q Consensus 361 naiCi~E~d~~g~l~kH~~~~~~~~~~~~~r~~~~LVvr~i~TVgNYdY~~~w~F~~DGtIe~ev~aTGil~~~~~~~~~ 440 (660)
|||||||+|+|.|||||++.+ . +.+||+++||||+|+|||||||||+|+|||||+||+||||||||++.. +.
T Consensus 443 NaICihE~D~G~~lwKHt~~~--~---~~v~r~r~LVvr~I~TVgNYDYif~w~F~qdGsIe~eVraTGiLst~~--~~- 514 (797)
T 3pgb_A 443 DSLCLFEFDADYPMARHSTSE--F---VSVTKNVYFTLRSVSTIGNADYMFSYNFHMDGTIGVEVRASGYIQSAY--YA- 514 (797)
T ss_dssp EEEEEEEEECSSCSEEEECSS--E---EEEECCEEEEEEEEEEETTEEEEEEEEECTTSCEEEEEEEEECCCCEE--CT-
T ss_pred cEEEEEEeeCCceeEEeccCC--c---ceEEeccEEEEEEEeeeccccEEEEEEEecCCeEEEEEEEEEEEEecc--cC-
Confidence 999999999666799999952 3 345566699999999999999999999999999999999999999762 21
Q ss_pred CCCcccccccceeccCcccccceeeEEeeeecCCCCCCCceEEEEEEEeecCCCCC--CcceeEEEEEEEeechhhHhhh
Q 006113 441 KDQIEEDVYGTLIAENTIGVRHDHFLTYRLDLDVDGDANSFVKSKLRTVRVNDHGS--PRKSYWTVDRETARTESAARIK 518 (660)
Q Consensus 441 ~~~~~~~~yGt~V~~~~~~~~HqH~f~~RlD~dIdG~~Nsv~~~d~v~~~~~~~~n--p~~~~~~~~~~~l~tE~~a~~~ 518 (660)
.+.+|||+|+|+++|++|||+|||||||||||.+|||+++|+++++++.|++ |++|+|++++++++||++|+++
T Consensus 515 ----~~~~yGt~V~p~v~a~~HqH~f~~RlD~dIDG~~Nsv~~~d~~~~~~~~p~~p~~~~n~~~~~~t~l~tE~eA~~~ 590 (797)
T 3pgb_A 515 ----NNQDFGYQIHDSLSGSMHDHVLNFKADFDILGPNNTIELVSVVPVTKQFSWSGNKTRNTMQLGRSFIHSEDEARLN 590 (797)
T ss_dssp ----TCGGGCCEEETTEECCCEEEEEEEEEEECTTSSEEEEEEEEEEEEEEECTTTTTCEEEEEEEEEEECCBGGGCEEC
T ss_pred ----CCCCccceecCCccccccceEEEEeeccCCCCCCCeEEEEeeEEccCCCCCCCCcccceeEEEEEEccchhhhhhh
Confidence 1468999999999999999999999999999999999999999998866654 4689999999999999999999
Q ss_pred cCC-CCcEEEEecCCCCCCCCCceeEEEeeCCCcCcCCCCCC-hhhhcccccccceEEeeecCCccCCCCcCCCCCCCCC
Q 006113 519 LGS-EPVDLLFVNPNKKTKMGNLIGYRLVPYGVVGPLLSDDD-YPQIRAAFTNYNAWVTAYNISEKWAGGLYADQSRGDD 596 (660)
Q Consensus 519 ~~~-~~r~~~ivN~~~~N~~G~p~gY~l~p~~~~~~~~~~~s-~~~~ra~fa~~~lwVT~y~~~E~~asg~y~~q~~~~~ 596 (660)
++. ++|+|+|+|++++|++|+|+||||+|++++.+++.++| ...+||+||+|+||||||+|+|+||||+|++|+++++
T Consensus 591 ~~~~~~r~~~ivN~~~~N~~G~pvgYkL~p~~~~~~L~~~~s~~~~rra~fa~~~lwVT~y~d~E~~aaG~y~~qs~~~~ 670 (797)
T 3pgb_A 591 WGFNGQTQLHVVNQDKPNKFGEPRGYRILPSAGTAHLTVLNSSNLVHAAHWAEYDVQVTRQHDFEPTSAHPYNSQDIHNP 670 (797)
T ss_dssp CCGGGCEEEEEEEEEEECTTSCEEEEEEECSSCCCCCCCSSCTTTTTTTGGGGCSEEEEECCTTCCCSCCTTGGGCTTSC
T ss_pred cCCCCCceEEEeCCCCcCCCCCeeeEEEccCCCCccccCCCchhhhhhchhhhCceEEecCCCCccCCCCCCcccCCCCC
Confidence 999 99999999999999999999999999987776765544 6888999999999999999999999999999999875
Q ss_pred --ChhhhccCCCceecCCeEEEEEecceeCCCCCCCCC--cccccceeEEEeCCCCCCCCCCCCCCC
Q 006113 597 --TLSVWSKRNRSIENKDIVLWYTLGFHHVPCQEDFPV--MPTFNGGFELRPSNFFESNPVLKVVPP 659 (660)
Q Consensus 597 --~l~~~~~~~e~i~~~DlV~W~t~G~~HvPr~ED~Pv--mp~~~~~f~L~P~nFFd~nP~ldvP~~ 659 (660)
++.+|+ +||+|+|||||+|||||+||+||+||||| ||++++||+|||+||||+||+||+|..
T Consensus 671 ~v~~~~~~-~nesI~neDiVlW~t~G~~HiPr~ED~Pvt~MP~e~~gf~LrP~nFFd~NPald~~~~ 736 (797)
T 3pgb_A 671 PVDFSTFF-NGESLNQTDLVVWLNLGMHHVPHTGDLPNTVFTTAHSGVAFTPLNYLPGDPSRETVNM 736 (797)
T ss_dssp SCCGGGGC-SCCBCSSEEEEEEEEEEEEECCCGGGSSCBCTTTSEEEEEEEEESCSSSCGGGGCSCE
T ss_pred ccchhhhc-CCCccccCceEEEEecccccCCChhhCCCccCCcceeEEEEEcCCCCCCCccccCccc
Confidence 457887 99999999999999999999999999999 999999999999999999999999863
No 10
>2d0s_A Cytochrome C, cytochrome C552; heme protein, electron transport; HET: HEC; 2.20A {Hydrogenophilus thermoluteolus}
Probab=21.39 E-value=54 Score=25.71 Aligned_cols=19 Identities=16% Similarity=0.282 Sum_probs=16.8
Q ss_pred CCCCCCHHHHHHHHHHHHh
Q 006113 27 PLDSLTPSEFTQIQSIVTK 45 (660)
Q Consensus 27 PLdpLs~~Ei~~a~~~l~~ 45 (660)
|+..||.+||++++++|+.
T Consensus 59 ~~~~Ls~~ei~~l~~yl~~ 77 (79)
T 2d0s_A 59 PHPQVAEADIEKIVRWVLT 77 (79)
T ss_dssp CCTTSCHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHh
Confidence 4678999999999999985
No 11
>2cs7_A Pneumococcal histidine triad A protein; PHTA, pneumococcal histidine triad protein, structural genomics, unknown function; 1.20A {Streptococcus pneumoniae} SCOP: d.9.2.1
Probab=20.37 E-value=35 Score=26.71 Aligned_cols=18 Identities=22% Similarity=0.523 Sum_probs=16.4
Q ss_pred CCCCCCHHHHHHHHHHHH
Q 006113 27 PLDSLTPSEFTQIQSIVT 44 (660)
Q Consensus 27 PLdpLs~~Ei~~a~~~l~ 44 (660)
|-+.||+.|+++|.++|.
T Consensus 37 pk~~Ls~~el~~A~~yl~ 54 (55)
T 2cs7_A 37 PKNELSASELAAAEAFLS 54 (55)
T ss_dssp EGGGSCHHHHHHHHHHHH
T ss_pred EhHHCCHHHHHHHHHHhc
Confidence 778999999999999875
Done!