Your job contains 1 sequence.
>006130
MGLPEMAEFSRNFGVLVRVQGPDPKGLKMRRHAFHQYNSGKTTLSASGMLLPLSFFDTKV
AERNWGVNGLIVTVASVVEPFLLPQYRDKDTSEGQPELITGSQIDFLVEGKLRSEKEHED
VDKGSPEWVTAQLMMLVDIPVSSLALQSLMEASSGLPEHEWEVGWSLAPYNNSSQPLMGV
VKTSIESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSSYLKDLPNIALTPLNKR
GDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGE
HAHFVGILIRPLRQKSGAEIQLVIPWEAIATACSDLLLKEPQNAEKEIHINKGNLNAVGN
SLLFNSHILNGACCYKYEHVDSRCRSPLPIQKALASVCLITIDDGVWASGVLLNDQGLIL
TNAHLLEPWRFGKTTVSGWRNGVSFQPEDSASSGHTGVDQYQKSQTLPPKMPKIVDSSVD
EHRAYKLSSFSRGHRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSLLQLGYIPDQLCPID
ADFGQPSLGSAAYVIGHGLFGPRCGLSPSVSSGVVAKVVKANLPSYGQSTLQRNSAYPVM
LETTAAVHPGGSGGAVVNLDGHMIGLVTSNARHGGGTVIPHLNFSIPCAVLRPIFEFARG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006130
(660 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2032142 - symbol:DEG15 "degradation of peripla... 799 4.4e-154 2
DICTYBASE|DDB_G0279049 - symbol:DDB_G0279049 "trypsin-lik... 161 1.4e-25 4
ZFIN|ZDB-GENE-030131-8525 - symbol:tysnd1 "trypsin domain... 165 1.1e-22 3
UNIPROTKB|Q2T9J0 - symbol:TYSND1 "Peroxisomal leader pept... 182 9.0e-21 2
UNIPROTKB|F1SUE6 - symbol:TYSND1 "Uncharacterized protein... 161 1.9e-18 2
MGI|MGI:1919017 - symbol:Tysnd1 "trypsin domain containin... 164 4.8e-18 2
RGD|1307354 - symbol:Tysnd1 "trypsin domain containing 1"... 155 5.4e-18 2
UNIPROTKB|J9P6K2 - symbol:TYSND1 "Uncharacterized protein... 161 7.9e-11 1
UNIPROTKB|E1BF31 - symbol:E1BF31 "Uncharacterized protein... 140 1.9e-10 2
UNIPROTKB|G3MYB0 - symbol:G3MYB0 "Uncharacterized protein... 140 2.7e-09 2
UNIPROTKB|E2R4X7 - symbol:TYSND1 "Uncharacterized protein... 161 1.6e-08 1
UNIPROTKB|F1NN98 - symbol:TYSND1 "Uncharacterized protein... 145 6.9e-07 2
UNIPROTKB|F1P5W4 - symbol:TYSND1 "Uncharacterized protein... 145 8.8e-07 2
UNIPROTKB|Q9KUF5 - symbol:VC_0566 "Protease DO" species:2... 102 0.00087 3
TIGR_CMR|VC_0566 - symbol:VC_0566 "protease DO" species:6... 102 0.00087 3
>TAIR|locus:2032142 [details] [associations]
symbol:DEG15 "degradation of periplasmic proteins 15"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004175 "endopeptidase activity"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA]
InterPro:IPR009003 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005777 GO:GO:0006508 GO:GO:0008236 GO:GO:0009514
GO:GO:0004175 SUPFAM:SSF50494 EMBL:AC021044 EMBL:AY065045
IPI:IPI00529865 PIR:E86409 RefSeq:NP_174153.2 UniGene:At.28635
ProteinModelPortal:Q8VZD4 SMR:Q8VZD4 MEROPS:S01.501 PaxDb:Q8VZD4
EnsemblPlants:AT1G28320.1 GeneID:839726 KEGG:ath:AT1G28320
TAIR:At1g28320 eggNOG:NOG308540 HOGENOM:HOG000030657
InParanoid:Q8VZD4 OMA:KHAFHQY Genevestigator:Q8VZD4 Uniprot:Q8VZD4
Length = 709
Score = 799 (286.3 bits), Expect = 4.4e-154, Sum P(2) = 4.4e-154
Identities = 164/284 (57%), Positives = 197/284 (69%)
Query: 381 DSRCRSPLPIQKALASVCLITIDDGVWASGVLLNDQGLILTNAHLLEPWRFGKTTVSGWR 440
D+ + + I+KA+ SVCLIT++DGVWASG++LN+ GLILTNAHLLEPWR+GK V G
Sbjct: 349 DASIPAQVAIEKAMESVCLITVNDGVWASGIILNEHGLILTNAHLLEPWRYGKGGVYG-- 406
Query: 441 NGVSFQP-----EDSASSGHTGVDQYQKSQTLPPKMPKIVDSSVDEH-RAYKLSSFSRGH 494
G F+P E+ +S+G +Q KSQTLP K P+ SSV E+ R YK + GH
Sbjct: 407 EG--FKPYVLGAEEFSSTGSKFWEQ--KSQTLPRKAPRNHYSSVGENIREYKHNFLQTGH 462
Query: 495 RKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSLLQLGYIPDQLCPIDADFGQPSLGSAAYV 554
R IRVRL HLD W WC A +VY+CK LD++LLQL Y+P +L PI A+F P LG+ A+V
Sbjct: 463 RDIRVRLCHLDSWTWCPANVVYICKEQLDIALLQLEYVPGKLQPITANFSSPPLGTTAHV 522
Query: 555 IGHGLFGPRCGLXXXXXXXXXXXXXXXNLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGG 614
+GHGLFGPRCGL QS Q + +P MLETTAAVHPGGSGG
Sbjct: 523 VGHGLFGPRCGLSPSICSGVVAKVVHAKRRLNTQSISQEVAEFPAMLETTAAVHPGGSGG 582
Query: 615 AVVNLDGHMIGLVTSNARHGGGTVIPHLNFSIPCAVLRPIFEFA 658
AV+N GHMIGLVTSNARHG GTVIPHLNFSIPCAVL PIF+FA
Sbjct: 583 AVLNSSGHMIGLVTSNARHGAGTVIPHLNFSIPCAVLAPIFKFA 626
Score = 725 (260.3 bits), Expect = 4.4e-154, Sum P(2) = 4.4e-154
Identities = 164/345 (47%), Positives = 213/345 (61%)
Query: 1 MGLPEMAEFSRNFGVLVRVQGPDPKGLKMRRHAFHQYNSGKTTLSASGMLLPLSFF-DTK 59
M + ++ FSRNF VLV+V+GPDPKGLKMR+HAFHQY+SG TLSASG+LLP F +
Sbjct: 1 MDVSKVVSFSRNFAVLVKVEGPDPKGLKMRKHAFHQYHSGNATLSASGILLPRDIFLSGE 60
Query: 60 VAERNWGVNGLIVTVASVVEPFLLPQYR-DKDTSEGQPELITGSQIDFLVEGKLRSEKEH 118
VA + G + + V + P TS I+ + + + E
Sbjct: 61 VAAKVLFEAGQDMALVLTVASVVEPFLTLGHRTSSS----ISQDPVKLIPGAMIEIMVEG 116
Query: 119 E-DVDKGSPEWVTAQLMMLVDIPVSSLALQSLMEASSGLPEHEWEVGWSLAPYNNSSQPL 177
+ +K +P WV AQL+ LVD+PVSS ALQSL+EASSG + W++GWSL N SQP
Sbjct: 117 QLKSEKEAPFWVPAQLLSLVDVPVSSAALQSLIEASSGSKDSGWDIGWSLVSAANGSQPS 176
Query: 178 MGVVKTSIESNKISLMESHRPFAXXXXXXXXXXXXXXXRVAILGVSSYLKDLPNIALTPL 237
+ +IE LM+ P R+AILGV L P++
Sbjct: 177 I-----NIEHYSKPLMQLDEPH------NANFMAKSATRMAILGVPLSLLGQPSMNFASS 225
Query: 238 NKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPV 297
+ +GD L+A+GSPFG+LSP++FFNSVS GS+AN YP S +SL++AD+RCLPGMEG PV
Sbjct: 226 SSKGDTLVALGSPFGILSPVNFFNSVSTGSIANSYPSGSLKKSLMIADVRCLPGMEGAPV 285
Query: 298 FGEHAHFVGILIRPLRQK-SGAEIQLVIPWEAIATACSDLLLKEP 341
F ++ H +GILIRPLRQK SG EIQLV+PW AI TACS LLL+EP
Sbjct: 286 FAKNGHLIGILIRPLRQKNSGVEIQLVVPWGAITTACSHLLLEEP 330
>DICTYBASE|DDB_G0279049 [details] [associations]
symbol:DDB_G0279049 "trypsin-like serine protease
family protein" species:44689 "Dictyostelium discoideum"
[GO:0008152 "metabolic process" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] InterPro:IPR009003
dictyBase:DDB_G0279049 GO:GO:0003824 EMBL:AAFI02000026
GO:GO:0008152 SUPFAM:SSF50494 eggNOG:NOG308540 RefSeq:XP_641938.1
ProteinModelPortal:Q54XC3 EnsemblProtists:DDB0215320 GeneID:8621851
KEGG:ddi:DDB_G0279049 InParanoid:Q54XC3 OMA:IEYISHT Uniprot:Q54XC3
Length = 849
Score = 161 (61.7 bits), Expect = 1.4e-25, Sum P(4) = 1.4e-25
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRS-LLMADIRCLPGMEGGPV 297
+ G+ + VGSPFG +SP F NS+S G V NC S++ S L + D R LPG EG V
Sbjct: 291 RSGNSVYVVGSPFGFISPTMFLNSISNGIVCNCIQSSSSSSSSLFLIDARSLPGNEGSGV 350
Query: 298 FGEHAHFVGILIRPLRQKS 316
F + +G + P+R K+
Sbjct: 351 FNKDGLLIGFIAPPIRSKN 369
Score = 149 (57.5 bits), Expect = 1.4e-25, Sum P(4) = 1.4e-25
Identities = 29/62 (46%), Positives = 39/62 (62%)
Query: 599 VMLETTAAVHPGGSGGAVVNLDGHMIGLVTSNARHGGGTVIPHLNFSIPCAVLRPIFEFA 658
V +TTA+VH G SGG + +L G+ +G+VT NA+ G +I LNFSIP L F +A
Sbjct: 686 VSYQTTASVHSGNSGGGLFDLKGNFLGIVTCNAKQKNGLIITELNFSIPATSLIHFFHYA 745
Query: 659 RG 660
G
Sbjct: 746 NG 747
Score = 95 (38.5 bits), Expect = 1.4e-25, Sum P(4) = 1.4e-25
Identities = 37/159 (23%), Positives = 71/159 (44%)
Query: 389 PIQKALA----SVCLITIDDGVWASGVLLNDQGLILTNAHLLEP----------WRFGKT 434
PIQ+++ S+ L+ + W SGVL+++ G ILTNAHL+ P + +
Sbjct: 412 PIQQSVNDCQNSIVLVQFKNS-WGSGVLISESGYILTNAHLIIPSIPLIQQQIQQQQQQQ 470
Query: 435 TVSGWRNGVSFQPEDSASSGHTGVDQYQKSQTLPPKMPKI--VDSSVDEHRAYKLSSFS- 491
+ Q + + + T Q Q+ Q + P+ ++ D+ ++SS S
Sbjct: 471 QQQQQQQQQQQQQQQTNQTKQTKSSQQQQQQQQQQQQPQPFPIELYKDKKVDLRISSNSI 530
Query: 492 -RGHRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSLLQL 529
++ + +IWC I Y+ LD++L+++
Sbjct: 531 INNNQSSSLHQSSNSSFIWCKGTIEYISHTHLDIALIKI 569
Score = 61 (26.5 bits), Expect = 1.4e-25, Sum P(4) = 1.4e-25
Identities = 20/68 (29%), Positives = 29/68 (42%)
Query: 21 GPDPKGLKMRRHAFHQYNSGKTTLSASGMLLPLSFFDTKVAERNWGVNGLIVTVASVVEP 80
G +P R +F ++GK S SG +L L GLI+T ++ P
Sbjct: 66 GTNPNLQSTRSRSFSYSSNGKIIFSCSGFILDLE-------------KGLIITSPTIFLP 112
Query: 81 FLLPQYRD 88
F+L Q D
Sbjct: 113 FILQQQND 120
>ZFIN|ZDB-GENE-030131-8525 [details] [associations]
symbol:tysnd1 "trypsin domain containing 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR001254 InterPro:IPR009003 SMART:SM00020
ZFIN:ZDB-GENE-030131-8525 GO:GO:0006508 GO:GO:0004252
SUPFAM:SSF50494 EMBL:AL929344 GeneTree:ENSGT00390000014627
IPI:IPI00998117 Ensembl:ENSDART00000124122 Uniprot:E7F488
Length = 565
Score = 165 (63.1 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 45/117 (38%), Positives = 59/117 (50%)
Query: 549 GSAAYVIGHGLFGPRCGLXXXXXXXXXXXXXXXNLPSYGQSTLQR---NSAYPVMLETTA 605
G V+G+G G RCG PS L R + + PVML+TT
Sbjct: 393 GEDVVVVGYGALGSRCG------------------PSLTSGILSRVITHQSQPVMLQTTC 434
Query: 606 AVHPGGSGGAVVNLD-GHMIGLVTSNAR-HGGGTVIPHLNFSIPCAVLRPIFE-FAR 659
AV G SGGAV+ D G ++G+V+SN R + PHLNFSIP +L P+ FA+
Sbjct: 435 AVQSGASGGAVIRSDTGELLGIVSSNTRDYAAKVTYPHLNFSIPVTLLEPLLRRFAQ 491
Score = 159 (61.0 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 48/132 (36%), Positives = 65/132 (49%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVF 298
K+G ++A GSPFG L P F N++S G V+N +L++ D RCLPG EGG VF
Sbjct: 170 KKGCHVIACGSPFGGLCPDLFMNTISKGIVSNL---AGDENALILTDARCLPGTEGGGVF 226
Query: 299 ---GEHAHFVGILIRPLRQKSGAEIQLVIPWEAIATACS-DLLLKEPQNAEKEIHINKGN 354
G ++ VG++ PL KS W + CS L+LK E I K
Sbjct: 227 ISKGGTSYLVGLIASPLCWKSEE-------WIGLTLVCSVHLILKNMLQTEGSI---KET 276
Query: 355 LNAVGNSLLFNS 366
L V + L+ S
Sbjct: 277 LTGVSSQLVNGS 288
Score = 64 (27.6 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 399 LITIDDG-VWASGVLLNDQGLILTNAHLLE 427
++ ++ G +W SGVLLN Q L+LT H+++
Sbjct: 307 VVLVETGWLWGSGVLLN-QNLVLTCRHVVD 335
>UNIPROTKB|Q2T9J0 [details] [associations]
symbol:TYSND1 "Peroxisomal leader peptide-processing
protease" species:9606 "Homo sapiens" [GO:0006508 "proteolysis"
evidence=IMP] [GO:0016485 "protein processing" evidence=IMP]
[GO:0031998 "regulation of fatty acid beta-oxidation" evidence=IMP]
[GO:0002020 "protease binding" evidence=IPI] [GO:0005777
"peroxisome" evidence=IDA] [GO:0004252 "serine-type endopeptidase
activity" evidence=IMP] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR001254 InterPro:IPR009003 SMART:SM00020 GO:GO:0005777
GO:GO:0051260 GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494
EMBL:AL731540 GO:GO:0016485 GO:GO:0031998 eggNOG:NOG308540
EMBL:BC016840 EMBL:BC030242 EMBL:BC111501 IPI:IPI00303214
IPI:IPI00384482 RefSeq:NP_001035363.1 RefSeq:NP_775826.2
UniGene:Hs.533655 ProteinModelPortal:Q2T9J0 SMR:Q2T9J0
IntAct:Q2T9J0 STRING:Q2T9J0 MEROPS:S01.286 PhosphoSite:Q2T9J0
DMDM:146325807 PaxDb:Q2T9J0 PRIDE:Q2T9J0 Ensembl:ENST00000287078
Ensembl:ENST00000335494 GeneID:219743 KEGG:hsa:219743
UCSC:uc001jqr.3 UCSC:uc001jqs.3 CTD:219743 GeneCards:GC10M071897
HGNC:HGNC:28531 HPA:HPA030304 MIM:611017 neXtProt:NX_Q2T9J0
PharmGKB:PA134968651 HOGENOM:HOG000050236 HOVERGEN:HBG101259
InParanoid:Q2T9J0 OMA:ILTDARC OrthoDB:EOG4MCX09 GenomeRNAi:219743
NextBio:90734 Bgee:Q2T9J0 CleanEx:HS_TYSND1 Genevestigator:Q2T9J0
InterPro:IPR017345 PIRSF:PIRSF037989 Uniprot:Q2T9J0
Length = 566
Score = 182 (69.1 bits), Expect = 9.0e-21, Sum P(2) = 9.0e-21
Identities = 52/153 (33%), Positives = 74/153 (48%)
Query: 508 IWCDAKIVYVCKG--PLDVSLLQLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCG 565
IW ++V+ + P D++++ L D + PI G A V+G G+FG CG
Sbjct: 393 IW--GRVVFATQETCPYDIAVVSLEEDLDDV-PIPVPAEHFHEGEAVSVVGFGVFGQSCG 449
Query: 566 LXXXXXXXXXXXXXXXNLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVV-NLDGHMI 624
+ +Q N PVML+TT AVH G SGG + N G+++
Sbjct: 450 PSVTSGILS--------------AVVQVNGT-PVMLQTTCAVHSGSSGGPLFSNHSGNLL 494
Query: 625 GLVTSNARHGG-GTVIPHLNFSIPCAVLRPIFE 656
G++TSN R G PHLNFSIP VL+P +
Sbjct: 495 GIITSNTRDNNTGATYPHLNFSIPITVLQPALQ 527
Score = 144 (55.7 bits), Expect = 9.0e-21, Sum P(2) = 9.0e-21
Identities = 42/120 (35%), Positives = 60/120 (50%)
Query: 230 PNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIR 287
P +A++PL +G LL GSPFG P F N++S G ++N P LL+ D R
Sbjct: 203 PAMAVSPLGAVPKGAPLLVCGSPFGAFCPDIFLNTLSCGVLSNVAGP------LLLTDAR 256
Query: 288 CLPGMEGGPVFGEH--AHFVGILIRPLRQKSGAEIQLVIPWEA--IATACSDLLLKEPQN 343
CLPG EGG VF V +++ PL K+G + + A + A D L + P +
Sbjct: 257 CLPGTEGGGVFTARPAGALVALVVAPLCWKAGEWVGFTLLCAAAPLFRAARDALHRLPHS 316
Score = 37 (18.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 14/52 (26%), Positives = 22/52 (42%)
Query: 139 IPVSSLALQSLMEASSGLPEHEWEVGWSLAPYNNSSQPLMGVVKTSIESNKI 190
+P S+ AL +L+ G+P W L P +S PL +E +
Sbjct: 313 LPHSTAALAALLPPEVGVP-------WGL-PLRDSG-PLWAAAAVLVECGTV 355
>UNIPROTKB|F1SUE6 [details] [associations]
symbol:TYSND1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0031998
"regulation of fatty acid beta-oxidation" evidence=IEA] [GO:0016485
"protein processing" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA] [GO:0002020
"protease binding" evidence=IEA] InterPro:IPR001254
InterPro:IPR009003 SMART:SM00020 GO:GO:0005777 GO:GO:0051260
GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494 GO:GO:0016485
GO:GO:0031998 CTD:219743 OMA:ILTDARC InterPro:IPR017345
PIRSF:PIRSF037989 GeneTree:ENSGT00390000014627 EMBL:FP340184
RefSeq:XP_001927378.2 UniGene:Ssc.27581 Ensembl:ENSSSCT00000011229
GeneID:100157601 KEGG:ssc:100157601 Uniprot:F1SUE6
Length = 568
Score = 161 (61.7 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 48/153 (31%), Positives = 72/153 (47%)
Query: 508 IWCDAKIVYVCK--GPLDVSLLQLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCG 565
IW +V+ + P D++++ L + + PI G A V+G G+FG CG
Sbjct: 395 IW--GHVVFATQETSPYDIAVVSLEEDLEGV-PIPVPAEDFHEGEAVTVVGFGVFGQACG 451
Query: 566 LXXXXXXXXXXXXXXXNLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNL-DGHMI 624
+ +Q + PVML+TT AVH G SGG + + G+++
Sbjct: 452 PSVTSGILS--------------AVVQVDDT-PVMLQTTCAVHGGSSGGPLFSTCSGNLL 496
Query: 625 GLVTSNARHGG-GTVIPHLNFSIPCAVLRPIFE 656
G++ SN R G PHLNFSIP VL+P +
Sbjct: 497 GIIASNTRDNNTGATYPHLNFSIPITVLQPALQ 529
Score = 144 (55.7 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 40/109 (36%), Positives = 54/109 (49%)
Query: 230 PNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIR 287
P +A+ PL +G LLA GSPFG P F N++S G ++N P LL+ D R
Sbjct: 205 PIVAVAPLGAVPKGAPLLACGSPFGAFCPDIFLNTLSRGVLSNSAGP------LLLTDAR 258
Query: 288 CLPGMEGGPVFGEH--AHFVGILIRPLRQKSGAEIQLVIPWEAIATACS 334
CLPG EGG VF V ++ PL K+ + L + A C+
Sbjct: 259 CLPGTEGGGVFAARPAGTLVALVAAPLCWKAREWVGLTLLCAAAPLLCA 307
>MGI|MGI:1919017 [details] [associations]
symbol:Tysnd1 "trypsin domain containing 1" species:10090
"Mus musculus" [GO:0002020 "protease binding" evidence=ISO]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004252
"serine-type endopeptidase activity" evidence=ISO] [GO:0005777
"peroxisome" evidence=ISO] [GO:0006508 "proteolysis" evidence=ISO]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008236 "serine-type
peptidase activity" evidence=IEA] [GO:0016485 "protein processing"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031998 "regulation of fatty acid beta-oxidation" evidence=ISO]
[GO:0042802 "identical protein binding" evidence=ISO] [GO:0051260
"protein homooligomerization" evidence=ISO] InterPro:IPR001254
InterPro:IPR009003 SMART:SM00020 MGI:MGI:1919017 GO:GO:0005777
GO:GO:0051260 GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494
GO:GO:0016485 GO:GO:0031998 eggNOG:NOG308540 MEROPS:S01.286
CTD:219743 HOGENOM:HOG000050236 HOVERGEN:HBG101259 OMA:ILTDARC
OrthoDB:EOG4MCX09 InterPro:IPR017345 PIRSF:PIRSF037989
EMBL:AK005069 EMBL:AK154513 EMBL:BC119320 IPI:IPI00119465
RefSeq:NP_082188.1 UniGene:Mm.71514 ProteinModelPortal:Q9DBA6
SMR:Q9DBA6 PhosphoSite:Q9DBA6 PaxDb:Q9DBA6 PRIDE:Q9DBA6
Ensembl:ENSMUST00000020284 GeneID:71767 KEGG:mmu:71767
UCSC:uc007fgh.2 GeneTree:ENSGT00390000014627 InParanoid:Q9DBA6
NextBio:334449 Bgee:Q9DBA6 CleanEx:MM_TYSND1 Genevestigator:Q9DBA6
Uniprot:Q9DBA6
Length = 568
Score = 164 (62.8 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 51/152 (33%), Positives = 73/152 (48%)
Query: 508 IWCDAKIVYVCK--GPLDVSLLQLGYIPDQL--CPIDADFGQPSLGSAAYVIGHGLFGPR 563
IW ++V+ + P D++++ L ++L P G G V+G G+FG
Sbjct: 395 IW--GQVVFATQETSPYDIAVVSL---EEELNGVPTPVPAGHFHEGEPVSVVGFGVFGQA 449
Query: 564 CGLXXXXXXXXXXXXXXXNLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNL-DGH 622
CG ++ S S + R PVML+TT AVH G SGG + + G
Sbjct: 450 CG---------------PSVTSGILSAVVRVDGSPVMLQTTCAVHGGSSGGPLFSSGSGD 494
Query: 623 MIGLVTSNARHGG-GTVIPHLNFSIPCAVLRP 653
++G+V SN R G PHLNFSIP VL+P
Sbjct: 495 LLGIVASNTRDNNTGATYPHLNFSIPITVLQP 526
Score = 137 (53.3 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 37/99 (37%), Positives = 50/99 (50%)
Query: 230 PNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIR 287
P + + PL +G LLA GSPFG P F N++S G ++N P LL+ D R
Sbjct: 204 PVVTVAPLGAVVKGAPLLACGSPFGAFCPDIFLNTLSRGVLSNAAGP------LLLTDAR 257
Query: 288 CLPGMEGGPVFGEH--AHFVGILIRPLRQKSGAEIQLVI 324
CLPG EGG VF V ++ PL K+ + L +
Sbjct: 258 CLPGTEGGGVFAARPAGALVALVAAPLCWKAREWVGLTL 296
>RGD|1307354 [details] [associations]
symbol:Tysnd1 "trypsin domain containing 1" species:10116
"Rattus norvegicus" [GO:0002020 "protease binding"
evidence=IEA;ISO] [GO:0004252 "serine-type endopeptidase activity"
evidence=ISO;ISS] [GO:0005777 "peroxisome" evidence=ISO;ISS]
[GO:0006508 "proteolysis" evidence=ISO;ISS] [GO:0016485 "protein
processing" evidence=ISO;ISS] [GO:0031998 "regulation of fatty acid
beta-oxidation" evidence=ISO;ISS] [GO:0042802 "identical protein
binding" evidence=IEA;ISO] [GO:0051260 "protein
homooligomerization" evidence=IEA;ISO] InterPro:IPR001254
InterPro:IPR009003 SMART:SM00020 RGD:1307354 GO:GO:0005777
GO:GO:0051260 GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494
GO:GO:0016485 GO:GO:0031998 eggNOG:NOG308540 EMBL:CH474016
CTD:219743 HOGENOM:HOG000050236 HOVERGEN:HBG101259 OMA:ILTDARC
OrthoDB:EOG4MCX09 InterPro:IPR017345 PIRSF:PIRSF037989
GeneTree:ENSGT00390000014627 EMBL:BC160877 IPI:IPI00367889
RefSeq:NP_001102402.1 UniGene:Rn.20699 STRING:B1H261
Ensembl:ENSRNOT00000036719 GeneID:365571 KEGG:rno:365571
UCSC:RGD:1307354 NextBio:687678 Genevestigator:B1H261
Uniprot:B1H261
Length = 567
Score = 155 (59.6 bits), Expect = 5.4e-18, Sum P(2) = 5.4e-18
Identities = 48/152 (31%), Positives = 71/152 (46%)
Query: 508 IWCDAKIVYVCK--GPLDVSLLQLGYIPDQL--CPIDADFGQPSLGSAAYVIGHGLFGPR 563
IW ++V+ + P D++++ L ++L P+ G V+G G+FG
Sbjct: 394 IW--GRVVFATQETSPYDIAVVSL---EEELNGVPVPVPAEHFHEGEPVSVVGFGVFGQA 448
Query: 564 CGLXXXXXXXXXXXXXXXNLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNL-DGH 622
CG + + + A PVML+TT AVH G SGG + + G
Sbjct: 449 CGPSVTSGILS--------------AVVHVDDA-PVMLQTTCAVHGGSSGGPLFSTRSGD 493
Query: 623 MIGLVTSNARHGG-GTVIPHLNFSIPCAVLRP 653
++G+V SN R G PHLNFSIP VL+P
Sbjct: 494 LLGIVASNTRDNNTGATYPHLNFSIPITVLQP 525
Score = 146 (56.5 bits), Expect = 5.4e-18, Sum P(2) = 5.4e-18
Identities = 44/134 (32%), Positives = 65/134 (48%)
Query: 230 PNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIR 287
P + + PL +G LLA GSPFG P F N++S G ++N P LL+ D R
Sbjct: 204 PAVTVAPLGAVAKGAPLLACGSPFGAFCPDIFLNTLSRGVLSNAAGP------LLLTDAR 257
Query: 288 CLPGMEGGPVFGEH--AHFVGILIRPLRQKSGAEIQLVIPWEAIATACSDL-LLKEPQNA 344
CLPG EGG VF V ++ PL K+ W + C+ LL+ ++A
Sbjct: 258 CLPGTEGGGVFAARPAGALVALVAAPLCWKARE-------WVGLTLLCAAAPLLQVARSA 310
Query: 345 EKEIHINKGNLNAV 358
+H + +L+A+
Sbjct: 311 LSRLHPDSTSLSAL 324
>UNIPROTKB|J9P6K2 [details] [associations]
symbol:TYSND1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR009003 GO:GO:0003824 GO:GO:0008152 SUPFAM:SSF50494
GeneTree:ENSGT00390000014627 EMBL:AAEX03002793 EMBL:AAEX03002794
EMBL:AAEX03002795 Ensembl:ENSCAFT00000049497 Uniprot:J9P6K2
Length = 198
Score = 161 (61.7 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 51/154 (33%), Positives = 73/154 (47%)
Query: 508 IWCDAKIVYVCK--GPLDVSLLQLGYIPD-QLCPIDADFGQPSLGSAAYVIGHGLFGPRC 564
IW +V+ + P D++++ L D Q P+ G A V+G G+FG C
Sbjct: 25 IW--GHVVFATQETSPYDIAVVSLE--EDLQGIPLPVPTEHFHEGEAVSVVGFGVFGQAC 80
Query: 565 GLXXXXXXXXXXXXXXXNLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNL-DGHM 623
G ++ S S + R PVML+TT AVH G SGG + + G +
Sbjct: 81 G---------------PSVTSGILSAVVRVDDTPVMLQTTCAVHGGSSGGPLFSTCTGDL 125
Query: 624 IGLVTSNARHGG-GTVIPHLNFSIPCAVLRPIFE 656
+G+V SN R G PHLNFS+P VL+P +
Sbjct: 126 LGIVASNTRDNNTGATYPHLNFSVPVTVLQPALQ 159
>UNIPROTKB|E1BF31 [details] [associations]
symbol:E1BF31 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR009003 GO:GO:0003824 GO:GO:0008152 SUPFAM:SSF50494
InterPro:IPR017345 PIRSF:PIRSF037989 GeneTree:ENSGT00390000014627
EMBL:DAAA02061840 EMBL:DAAA02061841 IPI:IPI00904668
Ensembl:ENSBTAT00000052816 Uniprot:E1BF31
Length = 565
Score = 140 (54.3 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 38/99 (38%), Positives = 51/99 (51%)
Query: 230 PNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIR 287
P +A+ PL +G LLA GSPFG P F N++S G ++N P LL+ D R
Sbjct: 203 PVLAVAPLGDVPKGAPLLACGSPFGAFCPDIFLNTLSRGVLSNSAGP------LLLTDAR 256
Query: 288 CLPGMEGGPVFGEH--AHFVGILIRPLRQKSGAEIQLVI 324
CLPG EGG VF V ++ PL K+ + L +
Sbjct: 257 CLPGTEGGGVFASRPAGALVALVAAPLCWKAREWVGLTL 295
Score = 89 (36.4 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 18/37 (48%), Positives = 22/37 (59%)
Query: 621 GHMIGLVTSNARHGG-GTVIPHLNFSIPCAVLRPIFE 656
G+ G+V SN R G PHLNFSIP VL+P +
Sbjct: 490 GNRTGIVASNTRDNNTGATYPHLNFSIPITVLQPALQ 526
>UNIPROTKB|G3MYB0 [details] [associations]
symbol:G3MYB0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0031998
"regulation of fatty acid beta-oxidation" evidence=IEA] [GO:0016485
"protein processing" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA] [GO:0002020
"protease binding" evidence=IEA] InterPro:IPR009003 GO:GO:0005777
GO:GO:0051260 GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494
GO:GO:0016485 GO:GO:0031998 OMA:ILTDARC InterPro:IPR017345
PIRSF:PIRSF037989 GeneTree:ENSGT00390000014627 EMBL:DAAA02061840
EMBL:DAAA02061841 Ensembl:ENSBTAT00000063074 Uniprot:G3MYB0
Length = 569
Score = 140 (54.3 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 38/99 (38%), Positives = 51/99 (51%)
Query: 230 PNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIR 287
P +A+ PL +G LLA GSPFG P F N++S G ++N P LL+ D R
Sbjct: 203 PVLAVAPLGDVPKGAPLLACGSPFGAFCPDIFLNTLSRGVLSNSAGP------LLLTDAR 256
Query: 288 CLPGMEGGPVFGEH--AHFVGILIRPLRQKSGAEIQLVI 324
CLPG EGG VF V ++ PL K+ + L +
Sbjct: 257 CLPGTEGGGVFASRPAGALVALVAAPLCWKAREWVGLTL 295
Score = 78 (32.5 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 16/32 (50%), Positives = 19/32 (59%)
Query: 626 LVTSNARHGG-GTVIPHLNFSIPCAVLRPIFE 656
+V SN R G PHLNFSIP VL+P +
Sbjct: 499 IVASNTRDNNTGATYPHLNFSIPITVLQPALQ 530
>UNIPROTKB|E2R4X7 [details] [associations]
symbol:TYSND1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0031998 "regulation of fatty acid beta-oxidation" evidence=IEA]
[GO:0016485 "protein processing" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0002020 "protease binding" evidence=IEA] InterPro:IPR001254
InterPro:IPR009003 SMART:SM00020 GO:GO:0005777 GO:GO:0051260
GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494 GO:GO:0016485
GO:GO:0031998 GeneTree:ENSGT00390000014627 EMBL:AAEX03002793
EMBL:AAEX03002794 EMBL:AAEX03002795 Ensembl:ENSCAFT00000035412
Uniprot:E2R4X7
Length = 418
Score = 161 (61.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 51/154 (33%), Positives = 73/154 (47%)
Query: 508 IWCDAKIVYVCK--GPLDVSLLQLGYIPD-QLCPIDADFGQPSLGSAAYVIGHGLFGPRC 564
IW +V+ + P D++++ L D Q P+ G A V+G G+FG C
Sbjct: 245 IW--GHVVFATQETSPYDIAVVSLE--EDLQGIPLPVPTEHFHEGEAVSVVGFGVFGQAC 300
Query: 565 GLXXXXXXXXXXXXXXXNLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNL-DGHM 623
G ++ S S + R PVML+TT AVH G SGG + + G +
Sbjct: 301 G---------------PSVTSGILSAVVRVDDTPVMLQTTCAVHGGSSGGPLFSTCTGDL 345
Query: 624 IGLVTSNARHGG-GTVIPHLNFSIPCAVLRPIFE 656
+G+V SN R G PHLNFS+P VL+P +
Sbjct: 346 LGIVASNTRDNNTGATYPHLNFSVPVTVLQPALQ 379
>UNIPROTKB|F1NN98 [details] [associations]
symbol:TYSND1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR009003 GO:GO:0003824 GO:GO:0008152 SUPFAM:SSF50494
GeneTree:ENSGT00390000014627 EMBL:AADN02027980 EMBL:AADN02027981
IPI:IPI00822042 Ensembl:ENSGALT00000033745 Uniprot:F1NN98
Length = 332
Score = 145 (56.1 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPV 297
++G LLA G+PFG L P F N++S G ++N P+ R+LL+ D RCLPG +GGPV
Sbjct: 154 RKGAALLACGTPFGALCPELFLNALSTGVLSNATGPQ---RALLLTDARCLPGTQGGPV 209
Score = 41 (19.5 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 69 GLIVTVASVVEPFLLP 84
GL++ A+V+ PFL P
Sbjct: 43 GLVLCPAAVLVPFLQP 58
>UNIPROTKB|F1P5W4 [details] [associations]
symbol:TYSND1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0002020 "protease binding" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0016485 "protein processing" evidence=IEA]
[GO:0031998 "regulation of fatty acid beta-oxidation" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0051260
"protein homooligomerization" evidence=IEA] InterPro:IPR009003
GO:GO:0005777 GO:GO:0051260 GO:GO:0006508 GO:GO:0004252
SUPFAM:SSF50494 GO:GO:0016485 GO:GO:0031998
GeneTree:ENSGT00390000014627 EMBL:AADN02027980 EMBL:AADN02027981
IPI:IPI00684088 Ensembl:ENSGALT00000040687 Uniprot:F1P5W4
Length = 350
Score = 145 (56.1 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPV 297
++G LLA G+PFG L P F N++S G ++N P+ R+LL+ D RCLPG +GGPV
Sbjct: 154 RKGAALLACGTPFGALCPELFLNALSTGVLSNATGPQ---RALLLTDARCLPGTQGGPV 209
Score = 41 (19.5 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 69 GLIVTVASVVEPFLLP 84
GL++ A+V+ PFL P
Sbjct: 43 GLVLCPAAVLVPFLQP 58
>UNIPROTKB|Q9KUF5 [details] [associations]
symbol:VC_0566 "Protease DO" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008233 "peptidase activity" evidence=ISS]
Pfam:PF00595 InterPro:IPR001478 InterPro:IPR001940
InterPro:IPR009003 InterPro:IPR011782 Pfam:PF13180 PRINTS:PR00834
PROSITE:PS50106 SMART:SM00228 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006508 GO:GO:0004252
SUPFAM:SSF50494 SUPFAM:SSF50156 GO:GO:0008233 TIGRFAMs:TIGR02037
KO:K04771 OMA:GESGHTI HSSP:P09376 PIR:F82307 RefSeq:NP_230217.1
ProteinModelPortal:Q9KUF5 SMR:Q9KUF5 GeneID:2615243 KEGG:vch:VC0566
PATRIC:20080250 ProtClustDB:CLSK874012 Uniprot:Q9KUF5
Length = 456
Score = 102 (41.0 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 587 GQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNLDGHMIGLVTSNARHGGGTVIPHLNFSI 646
G+S L + + ++T AA++ G SGGA+VNL+G +IG+ T+ GG V + F+I
Sbjct: 191 GRSGLNIEN-FENFIQTDAAINSGNSGGALVNLNGELIGINTAILGPNGGNV--GIGFAI 247
Query: 647 PCAVLR 652
P +++
Sbjct: 248 PSNMMK 253
Score = 54 (24.1 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGV 253
VA+L ++ K+L I + +K GD +A+G+PFG+
Sbjct: 141 VALLKLNK-AKNLTEIRIADSDKLRVGDFAVAIGNPFGL 178
Score = 47 (21.6 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 133 LMMLVDIPVSSLALQSLMEASSGLP-EHEWEVGWSLAPYNNSSQPLMGVVKTSIESNKIS 191
L++L + +S A+ S + A++ LP E SLAP P VV ++E ++S
Sbjct: 6 LLVLTALSLSLSAILSPLPATAALPLSVNGEQIPSLAPMLEKVTP--AVVSIAVEGTQVS 63
>TIGR_CMR|VC_0566 [details] [associations]
symbol:VC_0566 "protease DO" species:686 "Vibrio cholerae
O1 biovar El Tor" [GO:0006508 "proteolysis" evidence=ISS]
[GO:0008233 "peptidase activity" evidence=ISS] Pfam:PF00595
InterPro:IPR001478 InterPro:IPR001940 InterPro:IPR009003
InterPro:IPR011782 Pfam:PF13180 PRINTS:PR00834 PROSITE:PS50106
SMART:SM00228 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006508
GO:GO:0004252 SUPFAM:SSF50494 SUPFAM:SSF50156 GO:GO:0008233
TIGRFAMs:TIGR02037 KO:K04771 OMA:GESGHTI HSSP:P09376 PIR:F82307
RefSeq:NP_230217.1 ProteinModelPortal:Q9KUF5 SMR:Q9KUF5
GeneID:2615243 KEGG:vch:VC0566 PATRIC:20080250
ProtClustDB:CLSK874012 Uniprot:Q9KUF5
Length = 456
Score = 102 (41.0 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 587 GQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNLDGHMIGLVTSNARHGGGTVIPHLNFSI 646
G+S L + + ++T AA++ G SGGA+VNL+G +IG+ T+ GG V + F+I
Sbjct: 191 GRSGLNIEN-FENFIQTDAAINSGNSGGALVNLNGELIGINTAILGPNGGNV--GIGFAI 247
Query: 647 PCAVLR 652
P +++
Sbjct: 248 PSNMMK 253
Score = 54 (24.1 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGV 253
VA+L ++ K+L I + +K GD +A+G+PFG+
Sbjct: 141 VALLKLNK-AKNLTEIRIADSDKLRVGDFAVAIGNPFGL 178
Score = 47 (21.6 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 133 LMMLVDIPVSSLALQSLMEASSGLP-EHEWEVGWSLAPYNNSSQPLMGVVKTSIESNKIS 191
L++L + +S A+ S + A++ LP E SLAP P VV ++E ++S
Sbjct: 6 LLVLTALSLSLSAILSPLPATAALPLSVNGEQIPSLAPMLEKVTP--AVVSIAVEGTQVS 63
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.137 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 660 630 0.00091 120 3 11 22 0.40 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 623 (66 KB)
Total size of DFA: 354 KB (2176 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 50.25u 0.08s 50.33t Elapsed: 00:00:04
Total cpu time: 50.26u 0.08s 50.34t Elapsed: 00:00:04
Start: Sat May 11 15:20:20 2013 End: Sat May 11 15:20:24 2013