Query 006131
Match_columns 660
No_of_seqs 231 out of 382
Neff 4.6
Searched_HMMs 46136
Date Thu Mar 28 18:48:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006131.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006131hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02703 beta-fructofuranosida 100.0 1E-142 3E-147 1157.8 38.9 480 181-660 124-618 (618)
2 PLN02973 beta-fructofuranosida 100.0 5E-134 1E-138 1086.1 35.2 455 183-643 100-569 (571)
3 PF12899 Glyco_hydro_100: Alka 100.0 8E-134 2E-138 1066.8 34.5 421 192-619 1-436 (436)
4 PLN03005 beta-fructofuranosida 100.0 2E-133 3E-138 1081.1 36.4 451 182-637 77-542 (550)
5 PF06202 GDE_C: Amylo-alpha-1, 100.0 6.8E-57 1.5E-61 481.0 31.9 312 211-611 20-370 (370)
6 COG3408 GDB1 Glycogen debranch 100.0 5.5E-48 1.2E-52 436.8 32.3 349 188-622 249-615 (641)
7 TIGR01561 gde_arch glycogen de 100.0 2.4E-46 5.2E-51 418.9 23.4 264 210-557 282-574 (575)
8 TIGR01531 glyc_debranch glycog 100.0 1.1E-45 2.3E-50 435.8 25.9 339 211-614 1022-1462(1464)
9 PRK10137 alpha-glucosidase; Pr 100.0 4.3E-29 9.4E-34 286.5 33.9 370 184-614 304-781 (786)
10 KOG3625 Alpha amylase [Carbohy 99.9 5.5E-24 1.2E-28 240.6 18.7 337 211-616 1067-1516(1521)
11 TIGR01577 oligosac_amyl oligos 99.9 1.6E-20 3.5E-25 213.0 32.4 333 188-616 256-613 (616)
12 PRK13271 treA trehalase; Provi 99.7 7E-15 1.5E-19 165.8 30.3 310 222-617 154-537 (569)
13 PLN02567 alpha,alpha-trehalase 99.6 2E-13 4.4E-18 154.0 31.3 333 221-623 146-551 (554)
14 PF04685 DUF608: Protein of un 99.5 1.4E-14 3.1E-19 156.0 9.4 285 236-590 23-347 (365)
15 PRK13272 treA trehalase; Provi 99.5 5.5E-12 1.2E-16 141.7 29.5 341 188-619 122-539 (542)
16 COG3387 SGA1 Glucoamylase and 99.5 8.1E-12 1.7E-16 142.7 28.6 344 189-618 245-606 (612)
17 PRK13270 treF trehalase; Provi 99.5 1.7E-11 3.7E-16 138.1 30.1 309 222-618 166-548 (549)
18 PF01204 Trehalase: Trehalase; 99.4 2.3E-11 5E-16 136.4 25.5 310 222-614 123-509 (512)
19 PF05592 Bac_rhamnosid: Bacter 99.4 5.3E-12 1.2E-16 139.8 16.6 292 227-627 148-458 (509)
20 PF03200 Glyco_hydro_63: Manno 99.1 4.9E-09 1.1E-13 123.3 23.3 325 243-613 412-798 (801)
21 COG3459 Cellobiose phosphoryla 99.1 4.6E-09 1E-13 122.5 21.1 273 231-573 615-922 (1056)
22 TIGR01535 glucan_glucosid gluc 99.1 1.1E-07 2.5E-12 109.6 31.8 355 185-619 248-635 (648)
23 PF00723 Glyco_hydro_15: Glyco 98.5 8.6E-06 1.9E-10 89.9 21.5 181 209-424 23-224 (448)
24 COG1626 TreA Neutral trehalase 98.4 5.3E-05 1.1E-09 85.3 23.0 312 221-617 165-553 (558)
25 COG4354 Predicted bile acid be 98.1 0.00025 5.4E-09 80.3 21.3 226 313-577 441-678 (721)
26 KOG2161 Glucosidase I [Carbohy 98.0 0.00067 1.5E-08 78.7 22.3 267 319-610 507-841 (849)
27 PF06824 DUF1237: Protein of u 97.7 0.0003 6.5E-09 77.9 12.4 337 205-609 29-418 (424)
28 KOG0602 Neutral trehalase [Car 97.7 0.0089 1.9E-07 68.8 23.8 317 221-622 179-570 (600)
29 COG3538 Uncharacterized conser 96.5 0.29 6.2E-06 53.7 20.0 172 227-413 60-259 (434)
30 KOG2119 Predicted bile acid be 90.1 1.1 2.4E-05 53.0 8.7 214 327-590 570-806 (879)
31 PF07221 GlcNAc_2-epim: N-acyl 58.5 2.2E+02 0.0047 30.5 13.8 81 506-589 236-323 (346)
32 COG1554 ATH1 Trehalose and mal 53.3 5.3E+02 0.011 31.9 19.2 63 506-573 601-663 (772)
33 cd00249 AGE AGE domain; N-acyl 47.6 3.8E+02 0.0083 28.7 21.1 240 319-616 58-314 (384)
34 PF03632 Glyco_hydro_65m: Glyc 46.0 55 0.0012 36.5 7.0 152 224-403 29-194 (370)
35 TIGR01507 hopene_cyclase squal 45.4 1.8E+02 0.0039 34.7 11.5 124 185-354 284-414 (635)
36 PF07721 TPR_4: Tetratricopept 41.2 37 0.00081 23.1 3.1 25 547-571 1-25 (26)
37 COG1331 Highly conserved prote 33.2 7.5E+02 0.016 30.1 13.8 219 318-620 277-555 (667)
38 PRK13807 maltose phosphorylase 32.4 1.7E+02 0.0037 35.7 8.8 78 319-403 430-514 (756)
39 COG4463 CtsR Transcriptional r 26.3 78 0.0017 31.2 3.6 78 452-531 33-119 (153)
40 PF13428 TPR_14: Tetratricopep 26.0 1.3E+02 0.0029 22.5 4.3 34 547-580 1-34 (44)
41 PF07470 Glyco_hydro_88: Glyco 24.6 8.7E+02 0.019 25.9 17.7 65 550-614 254-330 (336)
42 TIGR03463 osq_cycl 2,3-oxidosq 23.3 1.1E+03 0.023 28.3 13.0 132 185-354 273-411 (634)
43 PF06051 DUF928: Domain of Unk 21.5 1.1E+02 0.0023 31.0 3.8 26 385-410 143-168 (189)
44 cd02892 SQCY_1 Squalene cyclas 20.6 8.2E+02 0.018 29.1 11.3 143 185-354 326-487 (634)
No 1
>PLN02703 beta-fructofuranosidase
Probab=100.00 E-value=1.4e-142 Score=1157.78 Aligned_cols=480 Identities=71% Similarity=1.249 Sum_probs=469.9
Q ss_pred ccccccchHHHHHHHHHHHhhccccCccceeEeecCCCCCCCCCCCCCcccchHHHHHHHHhcCChHHHHHHHHHHhhhc
Q 006131 181 ETESEASNIEKEAWKLLRDAVVNYCGNPVGTVAANNPADKQPLNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQ 260 (660)
Q Consensus 181 ~~~~~~~~~~~~A~~lLr~~~v~~~~~p~GtlAA~~p~~~~~~nY~~vFgRD~vISal~~L~~G~peiar~~L~tla~lQ 260 (660)
...++.++++++||++||+++|+|||+|+||+||.+++..+++||++||+||++||+|++|++|++||||+||.++++||
T Consensus 124 ~~~~~~~~~~~eA~elL~~s~v~~~g~pvGtvAA~d~~~~~~lNY~qVFiRDfVpsaLafLl~Ge~eIVrnFl~~tL~lq 203 (618)
T PLN02703 124 AQSVGTKSIEDEAWDLLRQSVVFYCGSPIGTIAANDPSSTSVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILYTLQLQ 203 (618)
T ss_pred ccccCCChHHHHHHHHHHHhhhhhcCccceeEeccCCccccccCCCceeecccHHHHHHHHHCCCHHHHHHHHHHHHhhh
Confidence 34667799999999999999999999999999999986546799999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcceeeeccCCCCCCCccceecCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhh
Q 006131 261 SWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVD 340 (660)
Q Consensus 261 ~~e~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~ 340 (660)
+||+++|+|++++|+||+||||.|+|++++++.+||+++||||+.+|||+++|||+|||||++++|++.|||.+|+++++
T Consensus 204 ~~ektld~~q~g~G~mPaSfkv~~~~~~~~~~~~ee~l~aDfGe~AIgRV~pVDS~LWWIIllraY~k~TgD~sf~e~~~ 283 (618)
T PLN02703 204 SWEKTMDCHSPGQGLMPCSFKVKTVPLDGDDSMTEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCTGDLSVQERVD 283 (618)
T ss_pred hhHHHHHhccCCCCCcCceeeecccccccccccccccccCCcCccceeeeccccchhHHHHHHHHHHHhhccHHHhhhhh
Confidence 99999999999999999999999999999888899999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCCceeecCCCccccccccccCcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHH
Q 006131 341 VQTGIRLILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSAL 420 (660)
Q Consensus 341 ~q~~I~~IL~w~l~dgFd~~p~Llv~dGs~w~D~rm~r~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ra~aL 420 (660)
+|++|++||+||++++|+++|+|+||||+||+|+||+++|||||||||||+||||+.+|+....+.++.++++..|+.+|
T Consensus 284 ~Q~gI~liL~LcLa~~Fd~fPtLlVpDgs~miDRrMgv~G~PLEiQaLfy~ALR~a~~~L~~~~~~~e~i~~i~~rl~~L 363 (618)
T PLN02703 284 VQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALVCAREMLTPEDGSVDLIRALNNRLVAL 363 (618)
T ss_pred HHHHHHHHHHHHccCcCCCCceEeccCCCchhccccCcCCccHHHHHHHHHHHHHHHHhcCccchHHHHHHHHhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999988777889999999999999
Q ss_pred HHHHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceeeccCCCCccccccccchhHHHHh
Q 006131 421 SFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGHMDFRFFTLGNLWAIVS 500 (660)
Q Consensus 421 ~~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g~v~P~~~d~Rf~slGN~LAils 500 (660)
++|+++|||+|.+++|+||||+||+|+++|+|||||||++||+||.||||++||||+|||+|+++|||||++||+||+++
T Consensus 364 ~~hir~~yWld~~~ln~iyRykteey~~~A~NkfNi~p~siP~WL~dwlp~~gGYligNv~Pa~mDfRffsLGNlLAILs 443 (618)
T PLN02703 364 NFHIREYYWLDLKKINEIYRYQTEEYSYDAVNKFNIYPDQIPSWLVDFMPNRGGYLIGNLQPAHMDFRFFTLGNLWSIVS 443 (618)
T ss_pred HHHHHHHHhhcHHHhhHHHhhhhhhcchhhhhhcccCCCCcchHhhhhccccCceeeeeecccccccchhhhhhHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhhhhhhhcCCCccccCCCCC---------------CCcccCCCCchhhHHHHHHHHHHcCCcHH
Q 006131 501 SLGTARQNEGILNLIEAKWDDLVAHMPLKICYPALD---------------PWSYHNGGSWPTLLWQFTLACIKMGRPEL 565 (660)
Q Consensus 501 gLl~~eqa~~Il~~I~~~w~dL~t~~gLRtl~Pa~~---------------P~SYHNGgVWP~LLw~~~lA~lK~Gr~~~ 565 (660)
||+|++|+++||++|+++|+||++.||||+|||+++ ||||||||+||+|+|++++||+|+|++++
T Consensus 444 ~Lat~~Qs~aIm~lIe~~w~~Lvg~MPlkIcyPaie~~EWRi~TG~DpKN~PWSYHNGGsWP~LlWf~~aA~iK~Gr~~l 523 (618)
T PLN02703 444 SLATNDQSHAILDLIEAKWAELVADMPLKICYPAMEGEEWRIITGSDPKNTPWSYHNGGAWPTLLWQLTVASIKMGRPEI 523 (618)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHhccCccccccCCcCCccceeeeCcCCCCCCccccCCCcchHHHHHHHHHHHHcCCHHH
Confidence 999999999999999999999999999999999986 99999999999999999999999999999
Q ss_pred HHHHHHHHHhHhcCCCcCccccCCCCCCCCCCCchhhhhhHHHHHHHHHHhcCCCccccccccccHHHHhhhhhhccccc
Q 006131 566 AQKAVAMAEKRLSVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYLTSKMLLENPAKASLLFWEEDYELLENCVCALSKTG 645 (660)
Q Consensus 566 A~r~L~~a~~~L~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~lL~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (660)
|+++|+.++.++..+.|||||||++|+|+|++||.+|||||||||+++++|+||++++||++|||+++++.|+|.+++++
T Consensus 524 A~ral~~ae~rl~~d~WpEYyDGktGr~iGkqar~yQTWSiAGyLlAk~~l~~P~~~~~~~~~e~~~~~~~~~~~~~~~~ 603 (618)
T PLN02703 524 AEKAVELAERRISLDKWPEYYDTKRARFIGKQARLYQTWSIAGYLVAKLLLANPAAAKFLTSEEDSDLRNAFSCMISANP 603 (618)
T ss_pred HHHHHHHHHHHhhhccChhhccCCCCcCcceeccccCchHHHHHHHHHHHHhChhhccccccccchhhhhhheeecccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhccccC
Q 006131 646 RKKCLRFAARSQICV 660 (660)
Q Consensus 646 ~~~~~~~~~~~~~~~ 660 (660)
|+||+|+++|++++|
T Consensus 604 ~~~~~~~~~~~~~~~ 618 (618)
T PLN02703 604 RRTRGPKKAQQPFIV 618 (618)
T ss_pred cccCCCccccCCccC
Confidence 999999999999986
No 2
>PLN02973 beta-fructofuranosidase
Probab=100.00 E-value=5.3e-134 Score=1086.08 Aligned_cols=455 Identities=58% Similarity=1.069 Sum_probs=442.4
Q ss_pred ccccchHHHHHHHHHHHhhccccCccceeEeecCCCCCCCCCCCCCcccchHHHHHHHHhcCChHHHHHHHHHHhhhccc
Q 006131 183 ESEASNIEKEAWKLLRDAVVNYCGNPVGTVAANNPADKQPLNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQSW 262 (660)
Q Consensus 183 ~~~~~~~~~~A~~lLr~~~v~~~~~p~GtlAA~~p~~~~~~nY~~vFgRD~vISal~~L~~G~peiar~~L~tla~lQ~~ 262 (660)
+++.++|+++||++|++++|+|||+|+|||||.||+ ++++||++||+||++||+|++|++|++||||+||..+++||+|
T Consensus 100 ~~~~~~~~~~aw~~l~~s~v~~~g~pvgtvAa~d~~-~~~lNY~qVFiRDfVpsaLafLl~Ge~eIVrnFl~~TL~lq~~ 178 (571)
T PLN02973 100 GFESHPMVGEAWDALRRSMVYFRGQPVGTIAAVDNS-EEKLNYDQVFVRDFVPSALAFLMNGEPDIVKNFLLKTLRLQSW 178 (571)
T ss_pred cCCCCcHHHHHHHHHHhheEEECCeeeeeeeccCCc-cccccCcchhhhccHHHHHHHHHCCCHHHHHHHHHHHHhhhhh
Confidence 467799999999999999999999999999999985 4899999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCcceeeeccCCCCCCCccceecCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhhhH
Q 006131 263 EKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQ 342 (660)
Q Consensus 263 e~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~~q 342 (660)
||++|+|++++|+||+||||+|+|+++ +|++.||||+.+||++.+|||+|||||++++|++.|||.+|++.+++|
T Consensus 179 ektld~~q~g~G~mPaSfkv~~~p~~~-----~e~l~aDfG~~aIGRV~pVDS~LWWIIllraY~k~TgD~s~~e~pevQ 253 (571)
T PLN02973 179 EKKIDRFQLGEGVMPASFKVFHDPVRN-----HETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLADMPECQ 253 (571)
T ss_pred HHHHHhcccCCCCcCceeeecccccCc-----cccccccccccccccccccchhhHHHHHHHHHHHhccchhhhhcHHHH
Confidence 999999999999999999999987655 568899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCceeecCCCccccccccccCcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHH
Q 006131 343 TGIRLILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSF 422 (660)
Q Consensus 343 ~~I~~IL~w~l~dgFd~~p~Llv~dGs~w~D~rm~r~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ra~aL~~ 422 (660)
++|+.|+++|++++|+++|+|+||||+||+|++|+++|||||||||||+||||+.+|+....+.++.++++.+|+.+|++
T Consensus 254 rgi~lil~lcL~~~Fd~~ptLlVpDgs~miDrrMgv~G~pLeiQaLfy~ALR~a~~~L~~~~~~~~~i~~i~~rl~~L~~ 333 (571)
T PLN02973 254 KGIRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALFFMALRCALLLLKHDGEGKEMVEQIVKRLHALSY 333 (571)
T ss_pred HHHHHHHHHhcccccCCCceEeccCCccccccccccCCccHHHHHHHHHHHHHHHHhcCccchhHHHHHHHHhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998877778999999999999999
Q ss_pred HHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceeeccCCCCccccccccchhHHHHhcC
Q 006131 423 HVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGHMDFRFFTLGNLWAIVSSL 502 (660)
Q Consensus 423 ~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g~v~P~~~d~Rf~slGN~LAilsgL 502 (660)
|+++|||+|.+++|+|||||||+|+++|+|||||||+|||+||+||||++|||++|||+|+++|||||++||+||+++||
T Consensus 334 hir~~ywld~~~ln~iyRykteey~~~a~NkfNi~p~sip~wl~dwlp~~gGY~igNv~Pa~~DfRffslGNllAILs~L 413 (571)
T PLN02973 334 HMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPPHGGFFIGNVSPARMDFRWFALGNCIAILSSL 413 (571)
T ss_pred HHHHHHhcCHHHhhhHhhcchhhcchhhhhhccCCccccchhhhhhccCCCceeeeecccccCCcchhhhhhHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhhhhhhcCCCccccCCCCC---------------CCcccCCCCchhhHHHHHHHHHHcCCcHHHH
Q 006131 503 GTARQNEGILNLIEAKWDDLVAHMPLKICYPALD---------------PWSYHNGGSWPTLLWQFTLACIKMGRPELAQ 567 (660)
Q Consensus 503 l~~eqa~~Il~~I~~~w~dL~t~~gLRtl~Pa~~---------------P~SYHNGgVWP~LLw~~~lA~lK~Gr~~~A~ 567 (660)
++++|+++||++|+++|+||++.||||+|||+++ ||||||||+||+|+|++++||+|+|++++|+
T Consensus 414 at~~Qs~aIm~lIe~~w~~Lvg~MPlkicyPaie~~EWri~tG~dpKN~PWSYHNGGsWP~Llw~~~aA~iK~gr~~lA~ 493 (571)
T PLN02973 414 ATPEQSTAIMDLIESRWEELVGEMPLKVCYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWLLTAACIKTGRPQIAR 493 (571)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCcceeccCcCCccceehhccCCCCCccceecCCCccHHHHHHHHHHHHcCCHHHHH
Confidence 9999999999999999999999999999999986 9999999999999999999999999999999
Q ss_pred HHHHHHHhHhcCCCcCccccCCCCCCCCCCCchhhhhhHHHHHHHHHHhcCCCccccccccccHHHHhhhhhhccc
Q 006131 568 KAVAMAEKRLSVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYLTSKMLLENPAKASLLFWEEDYELLENCVCALSK 643 (660)
Q Consensus 568 r~L~~a~~~L~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~lL~~P~~~~~~~~~~~~~~~~~~~~~~~~ 643 (660)
++|+.++.++..+.|||||||++|+|+|++||.+|||||||||+++++|+||++++||+++||+++.+.+.|.-|-
T Consensus 494 ral~~ae~rl~~d~WpEyyDGktGr~iGkqar~yQTWSiAG~LlA~~~L~~P~~~~~~~~~e~~~~~~~~~~~~~~ 569 (571)
T PLN02973 494 RAIEVAEARLHKDHWPEYYDGKVGRYVGKQSRKNQTWSVAGYLVAKMMLEDPSHVGMVCLEEDKQMKPVMRRSNSW 569 (571)
T ss_pred HHHHHHHHHhhhcCChhhcCCCCCcCcceeccccCchHHHHHHHHHHHhhChhhcccccccccccccchhcccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999887653
No 3
>PF12899 Glyco_hydro_100: Alkaline and neutral invertase; InterPro: IPR024746 This is a family of endo-alpha-N-acetylgalactosaminidases. This is a unique enzyme that hydrolyses core 1-type O-glycan from glycoproteins. The proteins are produced in the gut-flora bacteria from Actinobacteria and Firmicutes [].; GO: 0033926 glycopeptide alpha-N-acetylgalactosaminidase activity
Probab=100.00 E-value=7.5e-134 Score=1066.84 Aligned_cols=421 Identities=69% Similarity=1.246 Sum_probs=413.5
Q ss_pred HHHHHHHHhhccccCccceeEeecCCCCCCCCCCCCCcccchHHHHHHHHhcCChHHHHHHHHHHhhhcccccccccCCC
Q 006131 192 EAWKLLRDAVVNYCGNPVGTVAANNPADKQPLNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSP 271 (660)
Q Consensus 192 ~A~~lLr~~~v~~~~~p~GtlAA~~p~~~~~~nY~~vFgRD~vISal~~L~~G~peiar~~L~tla~lQ~~e~~ld~~~~ 271 (660)
+||++|++++|+|+|+|+||+||.||+..+++||++||.||++||++++|+.|++|||||||..+++||++|+++|+|++
T Consensus 1 ~a~~~l~~s~v~~~g~pvGtvAa~d~~~~~~lNY~qvF~RDfvps~l~fL~~g~~eIVrnFL~~tl~Lq~~~~~~d~~~~ 80 (436)
T PF12899_consen 1 EAWELLERSIVYYQGQPVGTVAALDPSAEEALNYDQVFVRDFVPSALAFLMKGEPEIVRNFLLETLQLQSWEKQVDCFKP 80 (436)
T ss_pred ChHHHHhhheEeeCCceeeeeeecCCcccccccccceEeecChHHHHHHHHcCCHHHHHHHHHHHHhhhhhhhhcccccc
Confidence 59999999999999999999999999877999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcceeeeccCCCCCCCccceecCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhhhHHHHHHHHHH
Q 006131 272 GQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNL 351 (660)
Q Consensus 272 ~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~~q~~I~~IL~w 351 (660)
++|+||+||||++++ ++|++.|||||.+|||+.+|||++||||+|++|+|+|||.+|+++|++|++|++||++
T Consensus 81 g~G~mPaSFkv~~~~-------~~e~l~aDfGe~AIgRv~pVDs~~WWiillraY~k~tgD~s~~~~~~~Q~gi~liL~l 153 (436)
T PF12899_consen 81 GRGVMPASFKVLHEN-------EEETLIADFGERAIGRVAPVDSGLWWIILLRAYVKATGDYSLAESPEVQRGIRLILDL 153 (436)
T ss_pred CCCcccceEEEecCC-------CCceEecCcchhhhccccCcccccHHHHHHHHHHHHhcchhhhhcHHHHHHHHHHHHH
Confidence 999999999999863 4779999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCCCceeecCCCccccccccccCcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhhhhcc
Q 006131 352 CLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVD 431 (660)
Q Consensus 352 ~l~dgFd~~p~Llv~dGs~w~D~rm~r~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ra~aL~~~~~~~FWld 431 (660)
|++++||++|+|+||||+|||||||+++|||+|||||+|+|||||.+|+....+.++.++++.+|+.+|++|+|+|||+|
T Consensus 154 cL~~~Fd~~PtLlvpDg~~MiDRrMgv~G~PlEiQ~Lf~~aLr~a~~ll~~~~~~~~~~~~i~~rl~~L~~h~r~~yWld 233 (436)
T PF12899_consen 154 CLADGFDMFPTLLVPDGACMIDRRMGVYGHPLEIQALFYMALRCARELLKPDEEGKDLIERIDKRLHALSFHIREYYWLD 233 (436)
T ss_pred HcccccCCCceEEecCCceeecccccccCCcchHHHHHHHHHHHHHHhcCcccchhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999876788999999999999999999999999
Q ss_pred hhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceeeccCCCCccccccccchhHHHHhcCCCHHHHHHH
Q 006131 432 MKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGHMDFRFFTLGNLWAIVSSLGTARQNEGI 511 (660)
Q Consensus 432 ~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g~v~P~~~d~Rf~slGN~LAilsgLl~~eqa~~I 511 (660)
.+++|+||||+|||||++|+|||||||++||+||+||||++|||++||++|+++|||||++||+||+++||+|++|+++|
T Consensus 234 ~~~ln~iyr~~teey~~~a~N~fNi~p~~ip~wl~dwlp~~gGY~ignv~P~~~dfRff~lGNlLAiLsgLat~~qa~~I 313 (436)
T PF12899_consen 234 LKRLNEIYRYKTEEYGHTAVNKFNIYPDSIPDWLFDWLPEKGGYFIGNVSPARMDFRFFSLGNLLAILSGLATPEQAEAI 313 (436)
T ss_pred HHHHHHHHhccHhhhhhhhhhcccCCcccchHHHHHhcccCCceeEeeccccccceeehhhhhHHHHHhcCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhcCCCccccCCCCC---------------CCcccCCCCchhhHHHHHHHHHHcCCcHHHHHHHHHHHhH
Q 006131 512 LNLIEAKWDDLVAHMPLKICYPALD---------------PWSYHNGGSWPTLLWQFTLACIKMGRPELAQKAVAMAEKR 576 (660)
Q Consensus 512 l~~I~~~w~dL~t~~gLRtl~Pa~~---------------P~SYHNGgVWP~LLw~~~lA~lK~Gr~~~A~r~L~~a~~~ 576 (660)
+++|+++|++|+++||||+|+|+++ ||||||||+||+++|+|++|++|+|+.+.|++++..++++
T Consensus 314 ~~lIe~~~~~L~g~mPlki~yPale~~eWri~tg~dpKN~PwsYHNGG~WP~LlW~~~aA~ik~gr~~lA~~al~~a~~r 393 (436)
T PF12899_consen 314 MDLIEERWEDLVGPMPLKICYPALEGEEWRIYTGCDPKNTPWSYHNGGSWPVLLWFLTAALIKMGRPELAERALEAAENR 393 (436)
T ss_pred HHHHHHHHhhhccccchhhccCCCCCCCCccccCcCcCccccccccCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 9999999999999999999999986 9999999999999999999999999999999999999999
Q ss_pred hcCCCcCccccCCCCCCCCCCCchhhhhhHHHHHHHHHHhcCC
Q 006131 577 LSVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYLTSKMLLENP 619 (660)
Q Consensus 577 L~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~lL~~P 619 (660)
+.+++|||||||++|+|+|++|+.+||||||+||+++++|+||
T Consensus 394 L~~dewpEyydGktGrp~Gkqar~~QTWSaAgyLlA~~~l~~p 436 (436)
T PF12899_consen 394 LSKDEWPEYYDGKTGRPMGKQARKYQTWSAAGYLLAKHLLENP 436 (436)
T ss_pred hcccCCcccccCCCCCcccccccccCchHHHHHHHHHHHhhCc
Confidence 9999999999999999999999999999999999999999998
No 4
>PLN03005 beta-fructofuranosidase
Probab=100.00 E-value=1.6e-133 Score=1081.06 Aligned_cols=451 Identities=57% Similarity=1.048 Sum_probs=436.9
Q ss_pred cccccchHHHHHHHHHHHhhccccCccceeEeecCCCCCCCCCCCCCcccchHHHHHHHHhcCChHHHHHHHHHHhhhcc
Q 006131 182 TESEASNIEKEAWKLLRDAVVNYCGNPVGTVAANNPADKQPLNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQS 261 (660)
Q Consensus 182 ~~~~~~~~~~~A~~lLr~~~v~~~~~p~GtlAA~~p~~~~~~nY~~vFgRD~vISal~~L~~G~peiar~~L~tla~lQ~ 261 (660)
..++.++|+++||++|++++|+|||+|+||+||.+++..+++||++||+||++||+|++|++|++||||+||.++++||+
T Consensus 77 ~~~~~~~~~~~a~~~l~~s~v~~~g~pvGtvAA~d~~~~~~lNY~qvF~RDfvpsaLafLl~Ge~eIVrnFl~~~L~Lq~ 156 (550)
T PLN03005 77 NSFEPHPMMAEAWEALRRSMVFFRGQPVGTLAAVDNTTDEVLNYDQVFVRDFVPSALAFLMNGEPDIVKHFLLKTLQLQG 156 (550)
T ss_pred CCCCCCcHHHHHHHHHHhheEEECCccceeeeecCCccccccCCCceeecccHHHHHHHHHCCCHHHHHHHHHHHHHHhh
Confidence 35788999999999999999999999999999999865467999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcceeeeccCCCCCCCccceecCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhhh
Q 006131 262 WEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDV 341 (660)
Q Consensus 262 ~e~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~~ 341 (660)
||+++|+|++++|+||+||||+|+|+++ +++++||||+.+||++.+|||+|||||++++|++.|||.+|++++++
T Consensus 157 ~ek~~d~~q~g~G~mPaSfkv~~~p~~~-----~~~l~aDfG~~aIGRv~pVDS~LWWIIllraY~k~tgD~s~~e~pev 231 (550)
T PLN03005 157 WEKRVDRFKLGEGVMPASFKVLHDPIRE-----TDNIVADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDLTLSETPEC 231 (550)
T ss_pred hhhhhhcccCCCCCcCceeeecccccCC-----CccccccccccccccccccchhhHHHHHHHHHHhhccchhhhhChHH
Confidence 9999999999999999999999987655 45789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCCceeecCCCccccccccccCcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHH
Q 006131 342 QTGIRLILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALS 421 (660)
Q Consensus 342 q~~I~~IL~w~l~dgFd~~p~Llv~dGs~w~D~rm~r~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ra~aL~ 421 (660)
|++|+.||++|++++|+++|+|+||||+||+||+|+++|||||||||||+||||+.+|+....+.++.++++.+|+.+|+
T Consensus 232 Qrgi~lil~lcLa~~Fd~~ptLlvpDgs~miDRrMgv~G~pLeiQaLfy~ALR~~~~~L~~~~~~~~~i~~i~~rl~~L~ 311 (550)
T PLN03005 232 QKGMKLILSLCLAEGFDTFPTLLCADGCSMIDRRMGVYGYPIEIQALFFMALRSALSMLKPDGDGREFIERIVKRLHALS 311 (550)
T ss_pred HHHHHHHHHHhcccccCCCceEeccCCccccccccccCCccHHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999887777899999999999999
Q ss_pred HHHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceeeccCCCCccccccccchhHHHHhc
Q 006131 422 FHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGHMDFRFFTLGNLWAIVSS 501 (660)
Q Consensus 422 ~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g~v~P~~~d~Rf~slGN~LAilsg 501 (660)
+|+++|||+|.+++|+|||||||+|+++|+|||||+|+|||+||+||||++|||++|||+|+++|||||++||+||+++|
T Consensus 312 ~h~r~yyWld~~~ln~iyr~kteey~~~a~NkfNi~pd~ip~wl~dwlp~~gGY~igNv~pa~~dfRffslGNllAILs~ 391 (550)
T PLN03005 312 FHMRNYFWLDHQNLNDIYRFKTEEYSHTAVNKFNVMPDSIPEWVFDFMPLRGGYFVGNVGPAHMDFRWFALGNCVSILSS 391 (550)
T ss_pred HHHHHheecchhhhhhhhhccHhhhchhhhhccccCCccchhhhhhhcccCCceeeeecccccCCceehhhhhHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhhhhhhcCCCccccCCCCC---------------CCcccCCCCchhhHHHHHHHHHHcCCcHHH
Q 006131 502 LGTARQNEGILNLIEAKWDDLVAHMPLKICYPALD---------------PWSYHNGGSWPTLLWQFTLACIKMGRPELA 566 (660)
Q Consensus 502 Ll~~eqa~~Il~~I~~~w~dL~t~~gLRtl~Pa~~---------------P~SYHNGgVWP~LLw~~~lA~lK~Gr~~~A 566 (660)
|++++|+++||++|+++|++|++.||||+|+|+++ ||||||||+||+|+|++++||+|+|++++|
T Consensus 392 Lat~~Qs~aIm~lIe~~w~~Lv~~MPlkIcyPa~e~~eWri~tG~dpKN~PWSYHNGGsWP~Llw~~~aA~iK~gr~~lA 471 (550)
T PLN03005 392 LATPDQSMAIMDLLEHRWEELVGEMPLKICYPCLEGHEWRIVTGCDPKNTRWSYHNGGSWPVLLWQLTAACIKTGRPQIA 471 (550)
T ss_pred cCCHHHHHHHHHHHHHHHHHHhccCCcceeecccCCccceecccCCCCCCCccccCCCcchHHHHHHHHHHHHcCCHHHH
Confidence 99999999999999999999999999999999986 999999999999999999999999999999
Q ss_pred HHHHHHHHhHhcCCCcCccccCCCCCCCCCCCchhhhhhHHHHHHHHHHhcCCCccccccccccHHHHhhh
Q 006131 567 QKAVAMAEKRLSVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYLTSKMLLENPAKASLLFWEEDYELLENC 637 (660)
Q Consensus 567 ~r~L~~a~~~L~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~lL~~P~~~~~~~~~~~~~~~~~~ 637 (660)
+++|+.++.++..+.|||||||++|+|+|+|||.+|||||||||+++++|++|++++||+++||+++.+.+
T Consensus 472 ~ral~~ae~rl~~d~WpEyydGktGr~iGkqar~~QTWSiAG~Lla~~~L~~P~~~~~~~~~e~~~~~~~~ 542 (550)
T PLN03005 472 RRAVDLIESRLHRDCWPEYYDGKLGRYVGKQARKYQTWSIAGYLVAKMLLEDPSHIGMISLEEDKLMKPVI 542 (550)
T ss_pred HHHHHHHHHHhhhcCchhhcCCCCCcccceeccccCchHHHHHHHHHHHhhChhhccccccccccccchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999998765443
No 5
>PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homologue O93808 from SWISSPROT that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (3.2.1.33 from EC).; GO: 0004135 amylo-alpha-1,6-glucosidase activity, 0005978 glycogen biosynthetic process
Probab=100.00 E-value=6.8e-57 Score=480.95 Aligned_cols=312 Identities=26% Similarity=0.398 Sum_probs=247.4
Q ss_pred eEeecCCCCCCCCCCCCCcccchHHHHHHH-HhcCChHHHHHHHHHHhhhcccccccccCCCCCCCCCCcceeeeccCCC
Q 006131 211 TVAANNPADKQPLNYDQVFIRDFVPSALAF-LLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDG 289 (660)
Q Consensus 211 tlAA~~p~~~~~~nY~~vFgRD~vISal~~-L~~G~peiar~~L~tla~lQ~~e~~ld~~~~~~GliP~sFKV~h~~~~~ 289 (660)
+|+||.| ||.. ||||++||+.++ |..|+++.+|++|.+++++| .+|+||+.|.
T Consensus 20 ~i~AG~P------WF~~-~GRDt~Isl~gl~l~~~~~~~a~~~L~~~~~~~-----------~~G~ipn~~~-------- 73 (370)
T PF06202_consen 20 SIAAGYP------WFST-WGRDTFISLPGLLLSPGRFEEARNILATFAGTQ-----------RHGLIPNELR-------- 73 (370)
T ss_pred eEeccCc------cccc-cccHHHHHHHHHHhCCCcHHHHHHHHHHHHHhh-----------hcCcccCccc--------
Confidence 4589998 9999 999999998885 77999999999999998533 3799999651
Q ss_pred CCCCccceecCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhhhHHHHHHHHHHHHhCC-----CCCCCcee
Q 006131 290 GDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLTDG-----FDMFPSLL 364 (660)
Q Consensus 290 ~~~~~e~~l~aD~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~~q~~I~~IL~w~l~dg-----Fd~~p~Ll 364 (660)
+ |+. .+||+||||||||+++++|+++|||.+|+++ +.+.|+.||+|+.++. .+....|+
T Consensus 74 -----------~-~~~--~~Y~s~Dat~wfl~~l~~Y~~~t~D~~~l~~--~~~~i~~il~~~~~g~~~~~~~d~~~gl~ 137 (370)
T PF06202_consen 74 -----------D-GEE--PRYNSVDATLWFLIALQEYYRWTGDYSFLRE--LYPAIEEILEWYADGTDFGIRVDPEDGLI 137 (370)
T ss_pred -----------C-CCC--CCCCCCccHHHHHHHHHHHHHHhCCHHHHHH--HHHHHHHHHHHHHhCCCCccccccCCCee
Confidence 1 343 3699999999999999999999999999987 5999999999997742 23223333
Q ss_pred ecC----CCcccccc------ccccCcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhhhhcchhh
Q 006131 365 VTD----GSCMIDRR------MGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKK 434 (660)
Q Consensus 365 v~d----Gs~w~D~r------m~r~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ra~aL~~~~~~~FWld~k~ 434 (660)
... ..+|||.. .||.|++||||||||+||+.+++|+...+++ .+.++.++++.|+++|+++||++
T Consensus 138 ~~~~~~~~~tWmD~~~~g~~~tpr~g~~vEIqal~y~AL~~~~~la~~~~~~--~a~~~~~~A~~lk~~F~~~FW~~--- 212 (370)
T PF06202_consen 138 YSGNGLNNQTWMDARNDGRPVTPRDGAAVEIQALWYNALRFAAELAEKFGDE--LAARYREWAERLKESFEKRFWDE--- 212 (370)
T ss_pred ecCCCCCCCCccccccCCccccCCCCcchHHHHHHHHHHHHHHHHHhhcCCc--hHHHHHHHHHHHHHHHHHHHcCC---
Confidence 322 36999965 4889999999999999999999999854333 77888899999999999999963
Q ss_pred hhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceeeccCCCC-cccccc-ccchhHHHHhcCCCHHHHHHHH
Q 006131 435 INEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGH-MDFRFF-TLGNLWAIVSSLGTARQNEGIL 512 (660)
Q Consensus 435 l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g~v~P~~-~d~Rf~-slGN~LAilsgLl~~eqa~~Il 512 (660)
+.||+.+.+++.. .|.... +.+.++++.+++++++|+++|+
T Consensus 213 -------------------------------------~~g~~~d~ld~~~~~d~~irpN~~~a~~L~~~~l~~~~a~~vl 255 (370)
T PF06202_consen 213 -------------------------------------DRGYYADALDGDKEPDDSIRPNQLIALSLPPGLLDPEQAKKVL 255 (370)
T ss_pred -------------------------------------CCCEEEEEecCCCCCCcccccCchhHHhcCCccCCHHHHHHHH
Confidence 3355556565532 221110 1223456678999999999999
Q ss_pred HHHHhhhhhhhcCCCccccCCC---CCC----------CcccCCCCchhhHHHHHHHHHHcCCc-H----HHHHHHHHHH
Q 006131 513 NLIEAKWDDLVAHMPLKICYPA---LDP----------WSYHNGGSWPTLLWQFTLACIKMGRP-E----LAQKAVAMAE 574 (660)
Q Consensus 513 ~~I~~~w~dL~t~~gLRtl~Pa---~~P----------~SYHNGgVWP~LLw~~~lA~lK~Gr~-~----~A~r~L~~a~ 574 (660)
+++.+ +|++|+|||||+|. ++| .|||||+||||+++.|+.|++|+|.. + +++.+|..+.
T Consensus 256 ~~~~~---~L~tp~GlRTLs~~~~~Y~p~y~g~~~~rd~sYHnGsvWpw~~g~~~~al~r~g~~~~~~~~~~~~ll~~~~ 332 (370)
T PF06202_consen 256 DRVEE---ELLTPWGLRTLSPSDPRYNPIYEGDQDSRDMSYHNGSVWPWDNGIYAEALLRYGFDEEEAIREAKSLLEGFE 332 (370)
T ss_pred HHHHH---HcCCCCchhcccCCCCCcCCCCCCccccCcccccCCCcCcCcHHHHHHHHHHhCccchHHHHHHHHHHHHHH
Confidence 99854 89999999999976 445 89999999999999999999999883 3 4445555444
Q ss_pred hHh---cCCCcCccccCCCCCCCCCCCchhhhhhHHHHHH
Q 006131 575 KRL---SVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYLT 611 (660)
Q Consensus 575 ~~L---~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~ 611 (660)
.++ ..+++||+|||++ |.-+.+|++||||+|++|+
T Consensus 333 ~~~~~~~~~~lpEl~dg~~--~~~p~gc~~QAWS~a~ilr 370 (370)
T PF06202_consen 333 EHLQEFGLGRLPELFDGDP--PHYPRGCSPQAWSVAEILR 370 (370)
T ss_pred HHHhhccCCCcchhcCCCC--CCCCCCCHHHHHHHHHhhC
Confidence 444 5679999999987 4567899999999999875
No 6
>COG3408 GDB1 Glycogen debranching enzyme [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.5e-48 Score=436.76 Aligned_cols=349 Identities=22% Similarity=0.280 Sum_probs=263.7
Q ss_pred hHHHHHHHHHHHhhccccCccceeEeecCCCCCCCCCCCCCcccchHHHHHHHHhcCChHHHHHHHHHHhhhcccccccc
Q 006131 188 NIEKEAWKLLRDAVVNYCGNPVGTVAANNPADKQPLNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVD 267 (660)
Q Consensus 188 ~~~~~A~~lLr~~~v~~~~~p~GtlAA~~p~~~~~~nY~~vFgRD~vISal~~L~~G~peiar~~L~tla~lQ~~e~~ld 267 (660)
+...+|...|-.+.+....+..+ +-|+.|+ +.||. +||||++||++|+|+.|++|+||++|+++++
T Consensus 249 ~~~~~a~~dl~~~~~~~~~~g~~-~~Ag~P~---~~WF~-~fGRD~lIS~lgll~~g~~elArg~L~~~a~--------- 314 (641)
T COG3408 249 EAFRRAKADLLELTTSTGETGPG-LYAGLPI---AHWFS-PFGRDTLISALGLLLVGRFELARGTLNTLAR--------- 314 (641)
T ss_pred HHHHHHHHHHHHHHhhccccCcc-eEecCCc---chhcc-ccchHHHHHHHHHHhcCCHHHHHHHHHHHHh---------
Confidence 45566666655543322111222 3566663 36888 9999999999999877999999999999994
Q ss_pred cCCCCCCCCCCcceeeeccCCCCCCCccceecCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhhhHHHHHH
Q 006131 268 CYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRL 347 (660)
Q Consensus 268 ~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~~q~~I~~ 347 (660)
| ..+|+||+.| . .+.+.. .+||+||+|+||++++.+|+++|||.+|+++ +.+.+..
T Consensus 315 -~-~~~GkIPhe~--~----------------~~~~~~--~~Y~tvD~t~~~i~~~~~y~~~t~d~~~i~e--~~~~v~~ 370 (641)
T COG3408 315 -Y-SEPGKIPHEI--L----------------LSIPGE--PYYNTVDATPLFIYLLGAYLKYTGDTEFIRE--LWPSVGA 370 (641)
T ss_pred -h-ccCCCCcchh--h----------------hcCCCc--ceeccCCCcHHHHHHHHHHHHHhccHHHHHH--HHHHHHH
Confidence 3 4789999854 0 111111 3899999999999999999999999999998 5999999
Q ss_pred HHHHHHhCC---CCCCCceeecC--CCcccccc------ccccCcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHH
Q 006131 348 ILNLCLTDG---FDMFPSLLVTD--GSCMIDRR------MGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNR 416 (660)
Q Consensus 348 IL~w~l~dg---Fd~~p~Llv~d--Gs~w~D~r------m~r~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~r 416 (660)
|++|+.... |+++...+..+ ..+|||.. +++.|.|||+|||||+|++.+..++...+ ..+.++.+.++
T Consensus 371 a~d~~~~~~~~~~~~~~~~l~~~~~~~tW~Ds~~~~~~~~~~~g~pi~i~al~~~~~~a~~~~a~ll~-~~~~~~~~~~~ 449 (641)
T COG3408 371 ALDWILKGFDFGFDTYGDGLLEGGSNQTWMDSGDDIFAVTPRAGKPVAINALQYYALKAALRLANLLG-DEEDAARLEKI 449 (641)
T ss_pred HHHHHHhcCCccceecCcccccCCCCCCCeecCCccccccCCCCCceeHHHHHHHHHHHHHHHHHHhc-ccccHHHHHHH
Confidence 999999854 55666665555 47999976 57789999999999999999999988765 45566667777
Q ss_pred HHHHHHHHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceeeccCCCCccccccccchhH
Q 006131 417 LSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGHMDFRFFTLGNLW 496 (660)
Q Consensus 417 a~aL~~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g~v~P~~~d~Rf~slGN~L 496 (660)
+..|++.|.+.||.. ..+++++- +.+ ++- ++|+ |...+.+
T Consensus 450 a~~l~~~F~~~fw~~-~~f~dl~~-~~~-----------------------------~~~---~r~~-----~~~a~~l- 489 (641)
T COG3408 450 ARRLKESFEAKFWNP-TGFYDLAL-DDK-----------------------------DVP---IRPN-----FSNAIHL- 489 (641)
T ss_pred HHHHHHHHHHHhhCc-cchHhhhc-cCC-----------------------------Ccc---cCcc-----ceecccc-
Confidence 777888999999986 44555441 000 011 1222 2333333
Q ss_pred HHHhcCCCHHHHHHHHHHHHhhhhhhhcCCCccccCCCC---CCCcccCCCCchhhHHHHHHHHHHcCCcH-HHHHHHHH
Q 006131 497 AIVSSLGTARQNEGILNLIEAKWDDLVAHMPLKICYPAL---DPWSYHNGGSWPTLLWQFTLACIKMGRPE-LAQKAVAM 572 (660)
Q Consensus 497 AilsgLl~~eqa~~Il~~I~~~w~dL~t~~gLRtl~Pa~---~P~SYHNGgVWP~LLw~~~lA~lK~Gr~~-~A~r~L~~ 572 (660)
+.++|++++.+ .|++++++ +|+|||||||++|.. +|+.||||+||||+++.|+.++.|+|..+ ++.+.++.
T Consensus 490 -~~~gi~~~~~~-~~~~l~e~---~lltp~GlRTLS~~dp~Y~p~yYH~GtVWP~~~gifv~g~~r~G~~~~~~~~~~~~ 564 (641)
T COG3408 490 -LYTGIVDPERA-VIIRLAEE---DLLTPWGLRTLSPDDPRYNPMYYHNGTVWPHDTGIFVLGLRRYGLKDIQALELFDG 564 (641)
T ss_pred -cccccCchHHH-HHHHHHHH---hccCCccccccCCCCCCcCCCcccCCCcccchHHHHHHHHHHcCcccHHHHHHHHH
Confidence 36788887766 77777765 899999999999665 49999999999999999999999999888 67777776
Q ss_pred HHhHhcCCCcCccccCCCCCCCCCCCchhhhhhHHHHHH--HHHHhc-CCCcc
Q 006131 573 AEKRLSVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYLT--SKMLLE-NPAKA 622 (660)
Q Consensus 573 a~~~L~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~--a~~lL~-~P~~~ 622 (660)
+...-..+++||+|||..+ ..|.+|.+||||+|++|+ ++.+|. .|+..
T Consensus 565 ~~~~a~~~~~pE~f~g~~~--~~P~gc~~QAWS~a~~l~~~~~~~lg~~p~~~ 615 (641)
T COG3408 565 LFSSASPGRIPELFDGDSP--NRPKGCYPQAWSSAEILRSLLQGLLGIKPDGF 615 (641)
T ss_pred HhhhcccCCCcccccccCC--CCCCCcchhhhhHHHHHHHHHHHHhCCCcCcc
Confidence 6555566788999999994 336689999999999887 445665 66654
No 7
>TIGR01561 gde_arch glycogen debranching enzyme, archaeal type, putative. The seed for this model is composed of two uncharacterized archaeal proteins from Methanosarcina acetivorans and Sulfolobus solfataricus. Trusted cutoff is set so that essentially only archaeal members hit the model. The notable exceptions to archaeal membership are the Gram positive Clostridium perfringens which scores much better than some other archaea and the Cyanobacterium Nostoc sp. which scores just above the trusted cutoff. Noise cutoff is set to exclude the characterized eukaryotic glycogen debranching enzyme in S. cerevisiae. These cutoffs leave the prokaryotes Porphyromonas gingivalis and Deinococcus radiodurans below trusted but above noise. Multiple alignments including these last two species exhibit sequence divergence which may suggest a subtly different function for these prokaryotic proteins.
Probab=100.00 E-value=2.4e-46 Score=418.94 Aligned_cols=264 Identities=20% Similarity=0.237 Sum_probs=200.7
Q ss_pred eeEeecCCCCCCCCCCCCCcccchHHHHHHH-HhcCChHHHHHHHHHHhhhcccccccccCCCCCCCCCCcceeeeccCC
Q 006131 210 GTVAANNPADKQPLNYDQVFIRDFVPSALAF-LLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLD 288 (660)
Q Consensus 210 GtlAA~~p~~~~~~nY~~vFgRD~vISal~~-L~~G~peiar~~L~tla~lQ~~e~~ld~~~~~~GliP~sFKV~h~~~~ 288 (660)
-||.||-| ||. +||||+|||++|+ |.+|+++.||++|+++++ ++ .+|+|||.|
T Consensus 282 ~tiiAGyp------wF~-~WGRDt~Isl~Gl~l~tgr~~~A~~iL~~fa~----------~~-~~GliPN~~-------- 335 (575)
T TIGR01561 282 NAIIAGYH------WFD-DWGRDSFISLEGLLLIDKQFDEAKEAILKFAN----------LC-KRGLIPNNF-------- 335 (575)
T ss_pred cEEEecCc------hhc-cchhHHHHHHHHHHhcCCcHHHHHHHHHHHHH----------Hh-HCCCCCCcc--------
Confidence 35778877 555 5999999999997 669999999999999984 33 679999977
Q ss_pred CCCCCccceecCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhhhHHHHHHHHHHHHhC-CCCCC---Ccee
Q 006131 289 GGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLTD-GFDMF---PSLL 364 (660)
Q Consensus 289 ~~~~~~e~~l~aD~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~~q~~I~~IL~w~l~d-gFd~~---p~Ll 364 (660)
+|.|.. ++|++||||||||+++++|+++|||.+++++ +.+.++.|++++..+ +|..+ .+|+
T Consensus 336 -----------~~~g~~--p~YntvDAtLWfi~al~~Y~~~tgD~~~l~~--l~p~l~~ii~~y~~G~~~~i~~d~dGLi 400 (575)
T TIGR01561 336 -----------IAFGGD--PIYNGVDASLWAIHAIDKTFAYSQDFLFIRD--VVDKVLDIIDNYCAGNDFAIGMDNDLIF 400 (575)
T ss_pred -----------CCCCCC--ccCCCchHHHHHHHHHHHHHHHhCCHHHHHH--HHHHHHHHHHHHhcCCCcEEEECCCccE
Confidence 344443 4799999999999999999999999999987 589999999998774 34221 2332
Q ss_pred -ecCCCcccccc------ccccCcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhhhhcchhhhhH
Q 006131 365 -VTDGSCMIDRR------MGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINE 437 (660)
Q Consensus 365 -v~dGs~w~D~r------m~r~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ra~aL~~~~~~~FWld~k~l~~ 437 (660)
.....||||.+ +||+|+|||||||||+||+.+++|++..++. +..+.+.++.|++.|+++||++..+.
T Consensus 401 ~~g~~lTWMDa~~g~~~~tPR~G~~VEInALwYnAL~~~a~la~~~g~~---a~~y~~~A~~lk~~F~~~FW~~~~g~-- 475 (575)
T TIGR01561 401 HKGAPLTWMDAKVDERAVTPRAGAACEINALWYNALKTAEFLGNELGED---AESLEEKAAGVAKNFAEKFINPDGNC-- 475 (575)
T ss_pred eCCCCCCCCCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcc---HHHHHHHHHHHHHHHHHhcCCCCCCe--
Confidence 22246899964 6999999999999999999999999875432 34567777778999999999753321
Q ss_pred hhhcccccchhhhhhhcCCCCCCCcccccccccCCCC---ceeeccCCCCccccccccchhHHHHhcCCCHH-HHHHHHH
Q 006131 438 IYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGG---YLIGNLEPGHMDFRFFTLGNLWAIVSSLGTAR-QNEGILN 513 (660)
Q Consensus 438 i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~gg---YL~g~v~P~~~d~Rf~slGN~LAilsgLl~~e-qa~~Il~ 513 (660)
+.|.+..++. .-...++|+++ + ++++.++|++++ ++++|++
T Consensus 476 ---------------------------l~D~v~~d~~~~~~~d~s~RPNql----~----A~sL~~~ll~~~~~~~~vl~ 520 (575)
T TIGR01561 476 ---------------------------LFDLIHQDEAGNQVKDKAIRPNQI----F----AISLPFPIIDDESIAKAILD 520 (575)
T ss_pred ---------------------------eEEEEecCCCCCcccccccCCCce----e----HhhCCCCCCCHHHHHHHHHH
Confidence 1111111110 01112345443 1 122346899999 9999999
Q ss_pred HHHhhhhhhhcCCCccccCCCCC-------------CCcccCCCCchhhHHHHHHHH
Q 006131 514 LIEAKWDDLVAHMPLKICYPALD-------------PWSYHNGGSWPTLLWQFTLAC 557 (660)
Q Consensus 514 ~I~~~w~dL~t~~gLRtl~Pa~~-------------P~SYHNGgVWP~LLw~~~lA~ 557 (660)
++.+ +|+||+|||||+|... +.+||||+||||++++|+.|+
T Consensus 521 ~v~~---~Lltp~GlRTLsp~d~~Y~p~Y~g~~~~Rd~aYHqGtvWpwl~G~y~~A~ 574 (575)
T TIGR01561 521 LIEK---DLLRPFGLKSLSRDDPLYKGQYKGDALSRDTAYHNGSLPPWLHGALVKAR 574 (575)
T ss_pred HHHh---hccCCcccccCCCCCCCcCCCCCCCccccCCcCcCCCcCccchhhHHhhc
Confidence 8865 8999999999997754 459999999999999999985
No 8
>TIGR01531 glyc_debranch glycogen debranching enzymye. glycogen debranching enzyme possesses two different catalytic activities; oligo-1,4--1,4-glucantransferase (EC 2.4.1.25) and amylo-1,6-glucosidase (EC 3.2.1.33). Site directed mutagenesis studies in S. cerevisiae indicate that the transferase and glucosidase activities are independent and located in different regions of the polypeptide chain. Proteins in this model belong to the larger alpha-amylase family. The model covers eukaryotic proteins with a seed composed of human, nematode and yeast sequences. Yeast seed sequence is well characterized. The model is quite rigorous; either query sequence yields large bit score or it fails to hit the model altogether. There doesn't appear to be any middle ground.
Probab=100.00 E-value=1.1e-45 Score=435.83 Aligned_cols=339 Identities=18% Similarity=0.199 Sum_probs=246.3
Q ss_pred eEeecCCCCCCCCCCCCCcccchHHHHHHH-HhcCChHHHHHHHHHHhhhcccccccccCCCCCCCCCCcceeeeccCCC
Q 006131 211 TVAANNPADKQPLNYDQVFIRDFVPSALAF-LLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDG 289 (660)
Q Consensus 211 tlAA~~p~~~~~~nY~~vFgRD~vISal~~-L~~G~peiar~~L~tla~lQ~~e~~ld~~~~~~GliP~sFKV~h~~~~~ 289 (660)
+++||-|- =+..|..+||||++||+.|+ |.+|+++.||++|+++++ + ..+|+|||.|
T Consensus 1022 si~AGyPw--F~tg~mr~WGRDTfISLrGLlL~tGR~~eAk~ii~~fa~----------~-lr~GLIPNll--------- 1079 (1464)
T TIGR01531 1022 SLAAGLPH--FSVGYMRCWGRDTFIALRGMLLTTGRFDEARAIILAFAG----------T-LRHGLIPNLL--------- 1079 (1464)
T ss_pred eEEecCCc--cccCcccccchhheeecCcceeccCCHHHHHHHHHHHHH----------H-HHcCCCCCCC---------
Confidence 78898881 12234489999999999995 889999999999999983 2 3789999965
Q ss_pred CCCCccceecCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCc-HhHHHh--------------------hhhHHHHHHH
Q 006131 290 GDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGD-YALQER--------------------VDVQTGIRLI 348 (660)
Q Consensus 290 ~~~~~e~~l~aD~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD-~~f~~~--------------------~~~q~~I~~I 348 (660)
++ |..| +|+++||+||||.++++|++.++| .+++++ ..+.+.|+.|
T Consensus 1080 ----------~~-G~~p--rYNt~DA~lWfi~AIqdY~~~~~dg~~iL~~~v~R~fp~Ddt~~~~~~~~~~~l~~~iqeI 1146 (1464)
T TIGR01531 1080 ----------DE-GINP--RYNCRDAAWFWLQCIQDYVEIVPNGEKILKDPVRRIYPDDDSIPVDDGRADQYLFEVIYEA 1146 (1464)
T ss_pred ----------CC-CCcc--cccCccHHHHHHHHHHHHHHHcCCHHHhhhccccccccccccccccchhHHHHHHHHHHHH
Confidence 33 4433 699999999999999999999999 444211 1368899999
Q ss_pred HHHHHhCC-C------------------CC-----CCceeecC-----CCcccc-------cc------ccccCcccchh
Q 006131 349 LNLCLTDG-F------------------DM-----FPSLLVTD-----GSCMID-------RR------MGIHGHPLEIQ 386 (660)
Q Consensus 349 L~w~l~dg-F------------------d~-----~p~Llv~d-----Gs~w~D-------~r------m~r~G~PlEVQ 386 (660)
|+++.++. | +. ..+.++-. ..|||| +. +||.|+|||||
T Consensus 1147 l~~h~~G~~fRE~NAGp~iD~~M~deGfn~~I~vD~~~GLI~gGn~~ncgTWMDkmg~SekA~~~G~p~TPRdG~aVEIn 1226 (1464)
T TIGR01531 1147 LQKHFQGIQFRERNAGPQIDRVMTDEGFNVTIGVDWETGFIYGGNRFNCGTWMDKMGESEKAGNKGIPATPRDGAAVEIV 1226 (1464)
T ss_pred HHHHHcCCccccccccccchhhhccccccceEEEcCCCCcEecCCCCCCCCCcCCCCcccccccCCcccCCCCCCceeHH
Confidence 99998642 3 11 01222212 249999 22 69999999999
Q ss_pred HHHHHHHHHHHHHHhhc----CCChHHHHHHHHHHHHHHHHHHhhhhcch--hhhhHhhhcccccchhhhhhhcCCCCCC
Q 006131 387 SLFYSALRCSREMLIVN----DGTKNLVAAINNRLSALSFHVREYYWVDM--KKINEIYRYKTEEYSADAINKFNIYPDQ 460 (660)
Q Consensus 387 ALwY~ALr~aaeL~~~~----~g~~~~a~~l~~ra~aL~~~~~~~FWld~--k~l~~i~r~~te~y~~~a~nkFni~p~~ 460 (660)
||||+||+.+++|.+.. .|.+.......+.+..+++.|.+.||++. .-++++. ..-+|+-.||-|.
T Consensus 1227 aLwynAL~~~~~l~~~~~~~~~g~~~~~~~~~~wa~~ik~~Fe~~F~~~~~~~~lyDv~--------~~~vnrrgIykD~ 1298 (1464)
T TIGR01531 1227 GLLKSALRFLIELKEKGVFKRSGVETQKWSYIEWNQKIQDNFEKRFFVDESQDADYDVA--------KLGVNRRGIYKDS 1298 (1464)
T ss_pred HHHHHHHHHHHHHHHhcCcCcCCcccchhhHHHHHHHHHHHHhhhcCCCcccCcccccc--------chhhccccccccc
Confidence 99999999999998753 12221122344555556889999999843 2122211 1234555555554
Q ss_pred CcccccccccCCCCceeeccCCCCccccccccchhHHHHhcCCCHHHHHHHHHHHHhhhhhhhcCCCccccCCCCC----
Q 006131 461 IPSWLVDWIPNEGGYLIGNLEPGHMDFRFFTLGNLWAIVSSLGTARQNEGILNLIEAKWDDLVAHMPLKICYPALD---- 536 (660)
Q Consensus 461 ip~wl~~wl~~~ggYL~g~v~P~~~d~Rf~slGN~LAilsgLl~~eqa~~Il~~I~~~w~dL~t~~gLRtl~Pa~~---- 536 (660)
.++ ..+|-...++|++. + ++++...|++++++.++++.+ + +|++|+|||||+|...
T Consensus 1299 ~~s--------~~~~~D~qlRPN~~----i----A~sla~~l~~~~~a~~~L~~v-~---~LltP~GlRTLdP~D~~Y~g 1358 (1464)
T TIGR01531 1299 YGS--------TKPWTDYQLRPNFA----I----AMTVAPELFVPEKAWKALTIA-E---VLLGPLGMKTLDPSDWNYRG 1358 (1464)
T ss_pred cCC--------CCCCCCcccCCCce----E----EEeCCcccCCHHHHHHHHHHH-H---HhccCCccccCCCCCcCCCC
Confidence 321 22333335677754 2 344567889999999999999 5 7999999999999854
Q ss_pred ---------C------CcccCCCCchhhHHHHHHHHHHcCCc----H------HHHHHHHHHHhHhcC---CCcCccccC
Q 006131 537 ---------P------WSYHNGGSWPTLLWQFTLACIKMGRP----E------LAQKAVAMAEKRLSV---DQWPEYYDT 588 (660)
Q Consensus 537 ---------P------~SYHNGgVWP~LLw~~~lA~lK~Gr~----~------~A~r~L~~a~~~L~~---~~~pE~FDG 588 (660)
+ .+||||++|||++++|..|++|.+.. . .+++.|.....++.. +++||+|||
T Consensus 1359 ~Y~g~~dsrD~~t~kg~aYHqG~eW~WllG~fl~A~lk~~~~~~~~~~~~~~~~~~~~L~~~~~~l~~~~~g~l~El~dg 1438 (1464)
T TIGR01531 1359 YYNNGEDSDDFATAKGRNYHQGPEWVWPIGYFLRARLHFHFKTGPRCQAAAIKPVSYLLQQLYYHLKESPWRGLPELTNK 1438 (1464)
T ss_pred ccCCchhhccccccccccccCCCcCccchhHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHhcCCCCcccccCC
Confidence 4 49999999999999999999996432 1 334556666666644 589999999
Q ss_pred CCCCCCCCCCchhhhhhHHHHHHHHH
Q 006131 589 QSGRFIGKQSRLHQTWTIAGYLTSKM 614 (660)
Q Consensus 589 ~tg~p~G~~ac~~QAWSaA~~L~a~~ 614 (660)
+. |.-+++|..||||+|++|++..
T Consensus 1439 dg--p~~~~gc~aQAWSvaelLr~l~ 1462 (1464)
T TIGR01531 1439 DG--EYCNDSCPTQAWSVACLLELLY 1462 (1464)
T ss_pred CC--CCCCCCCHHHHHHHHHHHHHHh
Confidence 98 6778899999999999998753
No 9
>PRK10137 alpha-glucosidase; Provisional
Probab=99.97 E-value=4.3e-29 Score=286.51 Aligned_cols=370 Identities=15% Similarity=0.146 Sum_probs=260.4
Q ss_pred cccchHHHHHHHHHHHhhccccCccceeE--eecCCCCCCCCCCCC--CcccchHHHHHHHHhcCChHHHHHHHHHHhhh
Q 006131 184 SEASNIEKEAWKLLRDAVVNYCGNPVGTV--AANNPADKQPLNYDQ--VFIRDFVPSALAFLLNGEGDIVKNFLLHTLQL 259 (660)
Q Consensus 184 ~~~~~~~~~A~~lLr~~~v~~~~~p~Gtl--AA~~p~~~~~~nY~~--vFgRD~vISal~~L~~G~peiar~~L~tla~l 259 (660)
.+...+..+|.+.|+.. .-.+.|.+ ...-|+ +...||.. .|+||+.+.|++++. .+||+|++.|++++++
T Consensus 304 ~~~~~l~~kA~~~L~~N----wr~~~g~~~~~~t~Ps-~gl~Wf~~~~~W~WDS~~~A~~la~-fdpelA~~~lr~Lf~~ 377 (786)
T PRK10137 304 PEQTRVAVKAMETLNGN----WRSPAGAVKFNTVTPS-VTARWFSGNQTWPWDTWKQAYAMAH-FNPDVAKENIRAVFSW 377 (786)
T ss_pred HHHHHHHHHHHHHHHHh----ccccccccccCceEeC-CCCCCCCCCCccchHHHHHHHHHhh-cCHHHHHHHHHHHHHh
Confidence 44567888999999985 33334332 111111 12349999 999999999999665 5999999999999999
Q ss_pred cccccccccCCC-CCCCCCCcceeeeccCCCCCCCccceecCCC-CCCCCCcccCCC-cHHHHHHHHHHHHHHhCcHhHH
Q 006131 260 QSWEKTVDCYSP-GQGLMPASFKVRTVPLDGGDGTLEEVLDPDF-GESAIGRVAPVD-SGLWWIILLRAYGKITGDYALQ 336 (660)
Q Consensus 260 Q~~e~~ld~~~~-~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~-Ge~~~~yygsVD-AtLWfIIal~~Y~k~TGD~~f~ 336 (660)
|+++. |++++ ..|+||+ -|.|.+ .|+. |+.+ ..+... -.+.+.+++++|+++|+|.+|+
T Consensus 378 Q~~~~--d~~r~~~~G~Iph--~vf~~~------------~p~R~g~~~--~~ne~~tqPPL~a~av~~vy~~t~d~~fl 439 (786)
T PRK10137 378 QIQPD--DSVRPQDVGFVPD--LIAYNL------------SPERGGDGG--NWNERNTKPSLAAWSVMEVYNVTQDKAWL 439 (786)
T ss_pred hcccc--CCCCcCCCCeeeE--EeccCC------------Ccccccccc--cccCCCcCcCHHHHHHHHHHHHhCCHHHH
Confidence 99986 78886 7899998 333432 1232 2221 112111 2388999999999999999999
Q ss_pred HhhhhHHHHHHHHHHHHhC------CCCCCCce-----------------------------------------------
Q 006131 337 ERVDVQTGIRLILNLCLTD------GFDMFPSL----------------------------------------------- 363 (660)
Q Consensus 337 ~~~~~q~~I~~IL~w~l~d------gFd~~p~L----------------------------------------------- 363 (660)
++ +.|.|.+.++|+.+. |+.+|..-
T Consensus 440 ~~--lyPkL~a~h~Ww~~~RD~dg~Gl~eY~~~~~~~h~~~~g~~~~~i~~~~~~~~~~G~~n~~~~~~~~~~~~~~~~~ 517 (786)
T PRK10137 440 AE--MYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLFTVKKGDKEETQSGLNNYARVVEKGQYDSLEIPA 517 (786)
T ss_pred HH--HHHHHHHHHHHHHhcCCCCCCceeEeeccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 98 599999999999762 33332100
Q ss_pred -eecCCCcccc------cc----cc---------------------cc----Cc-----ccchhHHHHHHHHHHHHHHhh
Q 006131 364 -LVTDGSCMID------RR----MG---------------------IH----GH-----PLEIQSLFYSALRCSREMLIV 402 (660)
Q Consensus 364 -lv~dGs~w~D------~r----m~---------------------r~----G~-----PlEVQALwY~ALr~aaeL~~~ 402 (660)
.+..-.+-|| .. ++ .. |+ +|++|+|.|.|.+.+++|++.
T Consensus 518 ~~~~~WESGmDNap~f~~i~~~~~~~y~r~~y~r~~~~V~~~~~~~~dg~l~~~p~~~e~VDLNsyLy~a~~~LA~LAe~ 597 (786)
T PRK10137 518 QVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATI 597 (786)
T ss_pred cccCCCCCCCCCccccccccccccchhhhccccccceeeeehhcccCCCCccCCCCcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0000011123 00 00 11 22 589999999999999999987
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceeeccCC
Q 006131 403 NDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEP 482 (660)
Q Consensus 403 ~~g~~~~a~~l~~ra~aL~~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g~v~P 482 (660)
. |+.+.++++.++++.|+..|++.||.+..+++.=+.++++.. ..+ +.-.|
T Consensus 598 L-G~~e~A~~~~~~A~~Lr~aIn~~~WDee~GfY~DydL~~~~~------------------------~~~----~~g~~ 648 (786)
T PRK10137 598 L-GKPEEAKRYRQLAQQLADYINTCMFDETTGFYYDVRIEDKPL------------------------ANG----CAGKP 648 (786)
T ss_pred h-CChHHHHHHHHHHHHHHHHHHHHccCCcCCeEEEEecCcccc------------------------ccc----ccCcc
Confidence 5 567888899999999999999999976655432111111100 000 00001
Q ss_pred CCccccccccchhHHHHhcCCCHHHHHHHHHHHHhhhhhhhcCCCccccC---CCCCCCcccCCCCchhhHHHHHHHHHH
Q 006131 483 GHMDFRFFTLGNLWAIVSSLGTARQNEGILNLIEAKWDDLVAHMPLKICY---PALDPWSYHNGGSWPTLLWQFTLACIK 559 (660)
Q Consensus 483 ~~~d~Rf~slGN~LAilsgLl~~eqa~~Il~~I~~~w~dL~t~~gLRtl~---Pa~~P~SYHNGgVWP~LLw~~~lA~lK 559 (660)
+..+....++.+.+++|+++++|+++|++.+..+ +.+.+++|++|++ |.++|..||+|.|||.+.|+.+.++.+
T Consensus 649 --i~~~~~~~agf~PLwaGia~~eqA~~VV~~L~~p-~~F~t~~GipTlS~s~p~ydp~~YWRGpVWpp~N~Li~~GL~r 725 (786)
T PRK10137 649 --IVERGKGPEGWSPLFNGAATQANADAVVKVMLDP-KEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFYFGLKGMER 725 (786)
T ss_pred --eeeeccCccchhhccCCCCCHHHHHHHHHHhcCh-hhcCCCCCccCcCCCccccCCCCCCCCCcCHhHHHHHHHHHHH
Confidence 1122344666788899999999999999999865 2344566999986 456699999999999999999999999
Q ss_pred cCCcHHHHHHHHHHHh----HhcCCCcCccccCCCCCCCCCCCchhhhhhHHHHHHHHH
Q 006131 560 MGRPELAQKAVAMAEK----RLSVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYLTSKM 614 (660)
Q Consensus 560 ~Gr~~~A~r~L~~a~~----~L~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~ 614 (660)
+|..++|+++.....+ ....+.+.|+||..+|.+.|.. .++||+|-+|+++.
T Consensus 726 YG~~e~A~~La~~ll~~a~~l~~tG~~~E~YDp~TGeg~Ga~---~FSWTAAvlLml~~ 781 (786)
T PRK10137 726 YGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAP---NFSWSAAHLYMLYN 781 (786)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhcCceEEeECCCCCcccCCC---CCChHHHHHHHHHH
Confidence 9999999887776543 3467899999999999777665 77999999887764
No 10
>KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism]
Probab=99.91 E-value=5.5e-24 Score=240.62 Aligned_cols=337 Identities=23% Similarity=0.277 Sum_probs=225.9
Q ss_pred eEeecCCCCCCCCCCCCCcccchHHHHHHH-HhcCChHHHHHHHHHHhhhcccccccccCCCCCCCCCCcceeeeccCCC
Q 006131 211 TVAANNPADKQPLNYDQVFIRDFVPSALAF-LLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDG 289 (660)
Q Consensus 211 tlAA~~p~~~~~~nY~~vFgRD~vISal~~-L~~G~peiar~~L~tla~lQ~~e~~ld~~~~~~GliP~sFKV~h~~~~~ 289 (660)
++||+.| +-..+|..+||||++|++.|+ |.+|+...||+++..+++ | ...|+||+-.
T Consensus 1067 slaAGLp--HFsvg~mRcWGRDtFIaLrG~ll~TGRy~EAr~iIlaFa~------t-----lrHGLIPNLL--------- 1124 (1521)
T KOG3625|consen 1067 SLAAGLP--HFSVGIMRCWGRDTFIALRGILLITGRYVEARNIILAFAG------T-----LRHGLIPNLL--------- 1124 (1521)
T ss_pred hhhcCCc--cchhhhhhhcccceeeecccceEeecchHHHHHHHHHHHH------H-----hhccccchhh---------
Confidence 4566665 236799999999999999996 779999999999999984 2 4789999832
Q ss_pred CCCCccceecCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhC----------------cHh------HHHhhhhHHHHHH
Q 006131 290 GDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITG----------------DYA------LQERVDVQTGIRL 347 (660)
Q Consensus 290 ~~~~~e~~l~aD~Ge~~~~yygsVDAtLWfIIal~~Y~k~TG----------------D~~------f~~~~~~q~~I~~ 347 (660)
|-|- -.+|++=||+.||+.+++.|++... |.+ -..++ +...|+.
T Consensus 1125 -----------d~G~--~~RyNcRDA~W~wl~~Iq~Yve~vPnG~~ILkd~VsRiyP~DDs~v~~pgaf~q~-L~evi~E 1190 (1521)
T KOG3625|consen 1125 -----------DEGI--YARYNCRDAVWWWLQCIQDYVEMVPNGLDILKDPVSRIYPTDDSAVLPPGAFDQP-LFEVIQE 1190 (1521)
T ss_pred -----------hccc--cccccchHHHHHHHHHHHHHHHhCCChhhhhhCchheeCCCCCcccCCCchhhHH-HHHHHHH
Confidence 1122 2389999999999999999987632 222 11122 4556677
Q ss_pred HHHHHHh-------------------CCCCCC-----CceeecCC-----Cccccccc--------------cccCcccc
Q 006131 348 ILNLCLT-------------------DGFDMF-----PSLLVTDG-----SCMIDRRM--------------GIHGHPLE 384 (660)
Q Consensus 348 IL~w~l~-------------------dgFd~~-----p~Llv~dG-----s~w~D~rm--------------~r~G~PlE 384 (660)
||+-+.+ +||+.. .+.++-.| .+||| +| ||.|..||
T Consensus 1191 al~kH~qGiqfRErnAGpqiD~~M~DeGFnv~~gV~~~TGfv~GGn~~NCGTWMD-KMGeSerAgnkG~PaTPRDGsAVE 1269 (1521)
T KOG3625|consen 1191 ALQKHFQGIQFRERNAGPQIDRNMKDEGFNVTAGVDEETGFVYGGNRFNCGTWMD-KMGESERAGNKGIPATPRDGSAVE 1269 (1521)
T ss_pred HHHHHhccccchhccCCcccchhhhccCcceeeccccccceeecCCccccchhhh-hcccchhccCCCCCCCCCCCceee
Confidence 7766543 245321 34444433 59999 54 78889999
Q ss_pred hhHHHHHHHHHHHHHHhhcC-----------C--ChHHHHHHHHHHHHHHHHHHhhhhcchhhh--hHhhhcccccchhh
Q 006131 385 IQSLFYSALRCSREMLIVND-----------G--TKNLVAAINNRLSALSFHVREYYWVDMKKI--NEIYRYKTEEYSAD 449 (660)
Q Consensus 385 VQALwY~ALr~aaeL~~~~~-----------g--~~~~a~~l~~ra~aL~~~~~~~FWld~k~l--~~i~r~~te~y~~~ 449 (660)
+|+|-|.|||++.+|.+..- | .+-....++++ ++..|.+.|.++.... ++- ...
T Consensus 1270 i~GL~~salrfl~elkek~ifpy~~Ve~k~~g~~~k~s~~eW~qk---iqdNFeK~ffV~ed~s~~~~~--------~~~ 1338 (1521)
T KOG3625|consen 1270 IVGLSKSALRFLLELKEKNIFPYHGVEVKRHGKAIKWSYDEWNQK---IQDNFEKLFFVSEDPSDLNEK--------HPN 1338 (1521)
T ss_pred hhhhHHHHHHHHHHHHhcCCccccceEEecccccceecHHHHHHH---HHhhhhheecccCCcchhhhh--------ccc
Confidence 99999999999999987511 1 11223344444 5778999998876532 211 113
Q ss_pred hhhhcCCCCCCCcccccccccCCCCceeeccCCCCccccccccchhHHHHhcCCCHHHHHHHHHHHHhhhhhhhcCCCcc
Q 006131 450 AINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGHMDFRFFTLGNLWAIVSSLGTARQNEGILNLIEAKWDDLVAHMPLK 529 (660)
Q Consensus 450 a~nkFni~p~~ip~wl~~wl~~~ggYL~g~v~P~~~d~Rf~slGN~LAilsgLl~~eqa~~Il~~I~~~w~dL~t~~gLR 529 (660)
-+||-.||.|+.-. ..+|-.=-++|+ ++-.|..+-.|.+|+.|-+.++..++ -|++|.|||
T Consensus 1339 ~vnkr~IykDsyga--------t~~~tDyQLR~N--------F~IamtVAPeL~~pe~A~kAle~Aek---vLlGPlGMk 1399 (1521)
T KOG3625|consen 1339 LVNKRGIYKDSYGA--------TSPWTDYQLRPN--------FTIAMTVAPELFTPEKAWKALEIAEK---VLLGPLGMK 1399 (1521)
T ss_pred ccchhheecccccC--------CCCccceeccCC--------ceeEEEechhhcChHHHHHHHHHHHH---HhcCccccc
Confidence 45777777766411 111221123444 22234445667899999999998877 699999999
Q ss_pred ccCCCCC-------------------CCcccCCCCchhhHHHHHHHHHHcCC----cHHHHH------HHHHHHhHhcC-
Q 006131 530 ICYPALD-------------------PWSYHNGGSWPTLLWQFTLACIKMGR----PELAQK------AVAMAEKRLSV- 579 (660)
Q Consensus 530 tl~Pa~~-------------------P~SYHNGgVWP~LLw~~~lA~lK~Gr----~~~A~r------~L~~a~~~L~~- 579 (660)
||-|.+- -+-||||.-|-|+++.|.-|-+..++ ...+.. .|.....++..
T Consensus 1400 TlDP~D~nYr~yYdN~~Ds~d~~takG~NYHQGPEWlw~~GyfLrArl~f~~k~gp~~~~y~i~qv~~rL~~h~k~l~~S 1479 (1521)
T KOG3625|consen 1400 TLDPDDWNYRGYYDNALDSDDYNTAKGFNYHQGPEWLWPIGYFLRARLYFSRKMGPETTAYTIVQVKNRLSRHYKHLERS 1479 (1521)
T ss_pred ccChhhcccccccCCCccccchhhhccccccCCCceeehhHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhc
Confidence 9988741 78899999999999999998554433 222221 22223344433
Q ss_pred -C-CcCccccCCCCCCCCCCCchhhhhhHHHHHHHHHHh
Q 006131 580 -D-QWPEYYDTQSGRFIGKQSRLHQTWTIAGYLTSKMLL 616 (660)
Q Consensus 580 -~-~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~lL 616 (660)
| ++||+=.-+- . .-+.+|.-||||+|.+|-+..-|
T Consensus 1480 ~WrgLpELTN~ng-e-yC~dSc~tQAWSvacile~~ydL 1516 (1521)
T KOG3625|consen 1480 PWRGLPELTNENG-E-YCPDSCETQAWSVACILETLYDL 1516 (1521)
T ss_pred cccCchhhccCCc-C-cccccchHhHHHHHHHHHHHHHH
Confidence 2 7899866543 2 34568999999999988655433
No 11
>TIGR01577 oligosac_amyl oligosaccharide amylase. The name of this type of amylase is based on the characterization of an glucoamylase family enzyme from Thermoactinomyces vulgaris. The T. vulgaris enzyme was expressed in E. coli and, like other glucoamylases, it releases beta-D-glucose from starch. However, unlike previously characterized glucoamylases, this T. vulgaris amylase hydrolyzes maltooligosaccharides (maltotetraose, maltose) more efficiently than starch (PubMed: 11549021), indicating this enzyme belongs to a class of glucoamylase-type enzymes with oligosaccharide-metabolizing activity.
Probab=99.88 E-value=1.6e-20 Score=213.00 Aligned_cols=333 Identities=17% Similarity=0.148 Sum_probs=225.6
Q ss_pred hHHHHHHHHHHHhhccccCcccee-EeecCCCCCCC--CCCCCCcccchHHHHHHHHhcCChHHHHHHHHHHhhhccccc
Q 006131 188 NIEKEAWKLLRDAVVNYCGNPVGT-VAANNPADKQP--LNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEK 264 (660)
Q Consensus 188 ~~~~~A~~lLr~~~v~~~~~p~Gt-lAA~~p~~~~~--~nY~~vFgRD~vISal~~L~~G~peiar~~L~tla~lQ~~e~ 264 (660)
.++++++-.|+.. ...+.|. +||...+.... ..|.-+|.||+..++++++..|.++.++.++..+++.|.
T Consensus 256 ~~~~~Sll~Lk~~----~~~~~GaiiAs~s~~~~~~~~~~Y~y~W~RD~~~~a~Al~~~G~~~~a~~~l~~l~~~q~--- 328 (616)
T TIGR01577 256 SLYRRSLAVLRLL----TDGEYGSMIAAPEFDEDFVRCGGYAYCWGRDASYIATALDRAGYHDRVDRFFRWAMQTQS--- 328 (616)
T ss_pred HHHHHHHHHHHhc----cCCCCCcEEEcCCCCcccccCCCCceeccccHHHHHHHHHHCCCHHHHHHHHHHHHHhhC---
Confidence 4455555555543 2334354 46654321111 239999999999999999999999999999999996554
Q ss_pred ccccCCCCCCCCCCcceeeeccCCCCCCCccceecCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhhhHHH
Q 006131 265 TVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTG 344 (660)
Q Consensus 265 ~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~~q~~ 344 (660)
..|..|..+ + +|.+..|..+-...|.+-..++++++|++.|||.+|+++ +++.
T Consensus 329 -------~~G~~~~~~---~---------------~dG~~~~~~~~~Q~D~~g~~l~al~~y~~~t~d~~~~~~--~~~~ 381 (616)
T TIGR01577 329 -------RDGSWQQRY---Y---------------LNGRLAPLQWGLQIDETGSILWAMDQHYRLTNDRAFLEE--IWES 381 (616)
T ss_pred -------cCCCcceEE---e---------------cCCCCCCCCCCccccchhHHHHHHHHHHHHHCCHHHHHH--HHHH
Confidence 345555432 1 111011111124466666677899999999999999987 5999
Q ss_pred HHHHHHHHHhCCCCCCCceeecCCCccccccccccCcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHH
Q 006131 345 IRLILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHV 424 (660)
Q Consensus 345 I~~IL~w~l~dgFd~~p~Llv~dGs~w~D~rm~r~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ra~aL~~~~ 424 (660)
|+.+++|+.... .+.+..++-..|-. |.|+.+++++++|.||+++++|++.. |+.+.++++.+.+..+++.|
T Consensus 382 v~~a~~fl~~~~---~~~l~~~~~~lWEe----r~G~~~~t~a~~~aAL~~aa~lA~~l-Gd~~~a~~~~~~Ad~ik~~i 453 (616)
T TIGR01577 382 VQKAAQYLILFI---DPETPLPCRDLWEE----REGVFTYTASAVYGGLDAAAAVADKL-GEKRLAQNWKKAAEFIKRAV 453 (616)
T ss_pred HHHHHHHHHHhc---cCCCCCCCCcccee----cCCccCccHHHHHHHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHHH
Confidence 999999998732 12244455446754 56889999999999999999999885 55567888888888999999
Q ss_pred HhhhhcchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceeeccCCC----CccccccccchhHHH--
Q 006131 425 REYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPG----HMDFRFFTLGNLWAI-- 498 (660)
Q Consensus 425 ~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g~v~P~----~~d~Rf~slGN~LAi-- 498 (660)
+++||.+. +|++...+++. .+|.. +|++
T Consensus 454 ~~~~w~~~----------------------------------------~g~F~~~~~~~~~~~~vDaS------lL~l~~ 487 (616)
T TIGR01577 454 EERFWLPE----------------------------------------RQVFAKGIKLMVLDKTIDIS------ILGISV 487 (616)
T ss_pred HHhccCCC----------------------------------------CCEEEEeecCCCCCCcccHH------HHhHHH
Confidence 99998532 23444333321 23421 3333
Q ss_pred HhcCCCHHHHHHH--HHHHHhhhhhhhcCCCccccCCCCCCCcccCCCCchhhHHHHHHHHHHcCCcH------------
Q 006131 499 VSSLGTARQNEGI--LNLIEAKWDDLVAHMPLKICYPALDPWSYHNGGSWPTLLWQFTLACIKMGRPE------------ 564 (660)
Q Consensus 499 lsgLl~~eqa~~I--l~~I~~~w~dL~t~~gLRtl~Pa~~P~SYHNGgVWP~LLw~~~lA~lK~Gr~~------------ 564 (660)
.+|+++++..+.+ ++.|++ +|.++-| -..-.++.-.|+.|+.|...---++.++.+.|+.+
T Consensus 488 ~~g~l~~~Dpr~v~Tv~~I~~---~L~~~~~--ggi~RY~~D~y~~g~~w~i~T~wla~~~~~~g~~~~~~~~~~~~~~~ 562 (616)
T TIGR01577 488 PFNLIAPDDERMVKMAEAIEK---HLTSPIV--GGIKRYENDPYVGGNPWILTTLWLSQLYIKQGRILKALNHNGADIYL 562 (616)
T ss_pred hcCCCCCCChHHHHHHHHHHH---HhcccCC--CeeeCCCCCCCCCCCcHHHHHHHHHHHHHHhcccccccccchhhhHH
Confidence 4898887766555 777765 6765321 11234444478888755555333455567888775
Q ss_pred -HHHHHHHHHHhHh-cCCCcCccccCCCCCCCCCCCchhhhhhHHHHHHHHHHh
Q 006131 565 -LAQKAVAMAEKRL-SVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYLTSKMLL 616 (660)
Q Consensus 565 -~A~r~L~~a~~~L-~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~lL 616 (660)
.|+++++-+..+- ..+-+||=+|..+|+|.|- .|||||=|+++.+-..|
T Consensus 563 ~~A~~ll~~~~~~~~~~Gll~Eqvd~~~g~~~g~---~Pl~wSHa~~i~a~~~l 613 (616)
T TIGR01577 563 QKSKKLLKWVMDHRTDLGLLPEQVDKETGKPAWA---VPLGWSHAMFLLTVLDL 613 (616)
T ss_pred HHHHHHHHHHHhcCCCCCCCccccCCCCCCCCCc---CCcccchHHHHHHHHHH
Confidence 7778888776653 5688999999999988864 59999999988776544
No 12
>PRK13271 treA trehalase; Provisional
Probab=99.71 E-value=7e-15 Score=165.75 Aligned_cols=310 Identities=15% Similarity=0.196 Sum_probs=213.7
Q ss_pred CCCCCCCcccchHHHHHHHHhcCChHHHHHHHHHHhhhcccccccccCCCCCCCCCCcceeeeccCCCCCCCccceecCC
Q 006131 222 PLNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPD 301 (660)
Q Consensus 222 ~~nY~~vFgRD~vISal~~L~~G~peiar~~L~tla~lQ~~e~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD 301 (660)
+-.|.+++.=|+--.++|+|.+|..++||+.+.-++. .++. -|.|||-=++
T Consensus 154 GGRFrE~YYWDSY~i~~GLl~s~~~~~a~~mi~Nf~~------~i~~----yG~IPNg~R~------------------- 204 (569)
T PRK13271 154 GGRFREVYYWDSYFTMLGLAESGHWDKVADMVANFAH------EIDT----WGHIPNGNRS------------------- 204 (569)
T ss_pred CCCcchhhhhHHHHHHHhhHhcCCHHHHHHHHHHHHH------HHHH----hCcCcCCchh-------------------
Confidence 5579999999999999999999999999999999983 2334 4899983221
Q ss_pred CCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhhhHHHHHHHHH-HHHh-----------------CCCC--CC-
Q 006131 302 FGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILN-LCLT-----------------DGFD--MF- 360 (660)
Q Consensus 302 ~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~~q~~I~~IL~-w~l~-----------------dgFd--~~- 360 (660)
||-+=-=.+.|.-.+..|++.|+| +++++ ..+.|++=.+ |+.. +++. -|
T Consensus 205 -------YYl~RSQPP~l~~Mv~~~~~~~~~-~~l~~--~lp~l~kEy~~Wm~~~~~~~~~~~~~r~v~~~~~~~L~rY~ 274 (569)
T PRK13271 205 -------YYLSRSQPPFFALMVELLAQHEGD-AALKQ--YLPQMQKEYAYWMEGVENLQPGQQEKRVVKLQDGTLLNRYW 274 (569)
T ss_pred -------hcccCCCChhHHHHHHHHHhcCcH-HHHHH--HHHHHHHHHHHHhCCCcccCccccccceEEeCCCCcccccc
Confidence 222222334577778889988888 46654 2444443333 3331 1110 00
Q ss_pred -----C-------------c--------eeec-----C-C----Ccccccc--c----cccCcccchhHHHHHHHHHHHH
Q 006131 361 -----P-------------S--------LLVT-----D-G----SCMIDRR--M----GIHGHPLEIQSLFYSALRCSRE 398 (660)
Q Consensus 361 -----p-------------~--------Llv~-----d-G----s~w~D~r--m----~r~G~PlEVQALwY~ALr~aae 398 (660)
| . ++.+ + | +-|++.. + -.+=.||+.|||+|++.+.+++
T Consensus 275 ~~~~~PRpEsy~eD~~~a~~~~~~~~~~~y~~l~a~aESGwDfSsRw~~~~~~l~~i~t~~IiPVDLNALLy~ae~~LA~ 354 (569)
T PRK13271 275 DDRDTPRPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTIRTTSIVPVDLNALMFKMEKILAR 354 (569)
T ss_pred cCCCCCCCCcHHHHHHHHhhCCcchHHHHHHHHHHHhhcCCcchhhhccCCccccccccccccCchHHHHHHHHHHHHHH
Confidence 0 0 0000 0 1 1244211 0 1123689999999999999999
Q ss_pred HHhhcCCChHHHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceee
Q 006131 399 MLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIG 478 (660)
Q Consensus 399 L~~~~~g~~~~a~~l~~ra~aL~~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g 478 (660)
+++.. |+.+.+..+.++++.+++.|++.||-+. .||++|
T Consensus 355 la~~l-Gd~~~A~~y~~~A~~rr~AI~~~LWnee----------------------------------------~G~f~D 393 (569)
T PRK13271 355 ASKAA-GDNAMANQYETLANARQKAIEKYLWNDK----------------------------------------EGWYAD 393 (569)
T ss_pred HHHHh-CChhhHHHHHHHHHHHHHHHHHhcccCC----------------------------------------CCEEEE
Confidence 99875 5567777888899999999999998432 244444
Q ss_pred cc-CCCCccccccccchhHHHHhcCCCHHHHHHHHHHHHhhhhhhhcCCCccccCCCCCCCcccCCCC-chhhHHHHHHH
Q 006131 479 NL-EPGHMDFRFFTLGNLWAIVSSLGTARQNEGILNLIEAKWDDLVAHMPLKICYPALDPWSYHNGGS-WPTLLWQFTLA 556 (660)
Q Consensus 479 ~v-~P~~~d~Rf~slGN~LAilsgLl~~eqa~~Il~~I~~~w~dL~t~~gLRtl~Pa~~P~SYHNGgV-WP~LLw~~~lA 556 (660)
+. .-+... ..++..+++.+++|+++++|+++|++.+.+ +|+++.||+|..| ++..|++|.+ ||-+.|+++.+
T Consensus 394 YDl~~~~~r-~~~saa~f~PLwag~a~~~qA~~Vv~~l~~---~Ll~pgGLpTt~~--~SgqQWD~PngWaPlq~iiieG 467 (569)
T PRK13271 394 YDLKSHKVR-NQLTAAALFPLYVNAAAKDRANKVAAATKT---HLLQPGGLNTTSV--KSGQQWDAPNGWAPLQWVATEG 467 (569)
T ss_pred EECCCCCEe-echhHHHHHhhhcCCCCHHHHHHHHHHHHH---hcCCCCCccCCCC--CCCCCCcCcccCHhHHHHHHHH
Confidence 22 111111 135677888999999999999999999865 7899999999876 5679999998 99999999999
Q ss_pred HHHcCCcHHHHHHHHHHH----hHh-cCCCcCccccC-CCCCCCCCC---CchhhhhhHHHHHHHHHHhc
Q 006131 557 CIKMGRPELAQKAVAMAE----KRL-SVDQWPEYYDT-QSGRFIGKQ---SRLHQTWTIAGYLTSKMLLE 617 (660)
Q Consensus 557 ~lK~Gr~~~A~r~L~~a~----~~L-~~~~~pE~FDG-~tg~p~G~~---ac~~QAWSaA~~L~a~~lL~ 617 (660)
+.++|..++|+++-.... ... ..+.+.|.||- .+|.+.|.. -...+.||.|.+|-+...+.
T Consensus 468 L~~yG~~~lA~~la~rwl~~~~~~~~~~g~m~EKYd~~~~G~~gGGGeY~~q~GFGWTNgV~L~lL~~~~ 537 (569)
T PRK13271 468 LQNYGQKEVAMDVTWRFLTNVQHTYDREKKLVEKYDVSSTGTGGGGGEYPLQDGFGWTNGVTLKMLDLIC 537 (569)
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHHhcccCceEEeeCCCCCCCCCCCCCCCCCCCcCcHHHHHHHHHHhcC
Confidence 999999988887655432 222 56799999997 355443321 22378999999886655443
No 13
>PLN02567 alpha,alpha-trehalase
Probab=99.64 E-value=2e-13 Score=154.05 Aligned_cols=333 Identities=12% Similarity=0.076 Sum_probs=223.6
Q ss_pred CCCCCCCCcccchHHHHHHHHhcCChHHHHHHHHHHhhhcccccccccCCCCCCCCCCcceeeeccCCCCCCCccceecC
Q 006131 221 QPLNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDP 300 (660)
Q Consensus 221 ~~~nY~~vFgRD~vISal~~L~~G~peiar~~L~tla~lQ~~e~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~a 300 (660)
.+-.|.++|.=|+.-.++|+|..|..++||+.+..++.+| ...|.|||--+
T Consensus 146 PGgRFrE~yyWDSy~i~~GLl~s~~~~~A~~mi~Nf~~~i----------~~~GfIPNg~R------------------- 196 (554)
T PLN02567 146 PGSRFREVYYWDSYWVIRGLLASKMYETAKGVVENLLYLV----------DTYGFVPNGAR------------------- 196 (554)
T ss_pred cCCCcCccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH----------HHcCcCCCCCc-------------------
Confidence 3567999999999999999999999999999999999533 24489998211
Q ss_pred CCCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhhhHHHHHHHHHHHHhC-CC-------CCCCce---------
Q 006131 301 DFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLTD-GF-------DMFPSL--------- 363 (660)
Q Consensus 301 D~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~~q~~I~~IL~w~l~d-gF-------d~~p~L--------- 363 (660)
.||-..==.|.+...++.|++.|+|.+|+++ +.|.|.+=.+|-... +- .+..+|
T Consensus 197 -------~Yyl~RSQPPlla~mV~~~~~~t~d~~~l~~--~lp~L~~E~~~W~~~~~~v~i~~~~g~~~~L~rY~~~~~~ 267 (554)
T PLN02567 197 -------AYYTNRSQPPLLSAMVLAVYAATKDVELVRR--ALPALLKEHAFWTSGRHTVTIRDANGVVHVLSRYYAMWDK 267 (554)
T ss_pred -------ccccCCCCcHHHHHHHHHHHHhcCcHHHHHH--HHHHHHHHHHHHhcCCcceeeecCCCCcCCCcccccCCCC
Confidence 2566666678899999999999999999987 466665555554331 10 000000
Q ss_pred -----------ee-------------------cC-C----Ccccccc-----c-cccCcccchhHHHHHHHHHHHHHHhh
Q 006131 364 -----------LV-------------------TD-G----SCMIDRR-----M-GIHGHPLEIQSLFYSALRCSREMLIV 402 (660)
Q Consensus 364 -----------lv-------------------~d-G----s~w~D~r-----m-~r~G~PlEVQALwY~ALr~aaeL~~~ 402 (660)
.+ .+ | +-|+.-. + ...=.||..||+.|.+-+.+++|++.
T Consensus 268 PrpEsyreD~~~a~~~~~~~~~~~~y~~l~a~aESGwDfSsRw~~~~~~l~ti~t~~i~pVDLNa~L~~~e~~LA~la~~ 347 (554)
T PLN02567 268 PRPESSRIDKEVASKFSSSSEKQQLYRDIASAAESGWDFSSRWMRDGSNLTTLRTTSILPVDLNAFLLKMELDIAFFAKL 347 (554)
T ss_pred CCCccccccHHHHhcCCCchHHHHHHHHHHHHHHcCCCchhhhccccccccccccccccCccHHHHHHHHHHHHHHHHHH
Confidence 00 00 1 1122100 0 00114799999999999999999987
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceeeccCC
Q 006131 403 NDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEP 482 (660)
Q Consensus 403 ~~g~~~~a~~l~~ra~aL~~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g~v~P 482 (660)
. |+.+.+++..+++..++..|++.+|-+..+.+-=|.+.++.-. + +.-|- +.+
T Consensus 348 l-G~~~~a~~~~~~A~~~~~aI~~~lWdee~G~y~Dydl~~~~~~----~-------------------~~~~~---~~~ 400 (554)
T PLN02567 348 L-GDKATAERFLKAAKARKRAINAVLWNEEMGQWLDYWLPPNGAT----C-------------------QESYT---WDA 400 (554)
T ss_pred h-CChHHHHHHHHHHHHHHHHHHHHhcCcccCeEEeecccccccc----c-------------------ccccc---ccc
Confidence 5 5567788888999999999999999766553211111110000 0 00000 011
Q ss_pred CCccccccccchhHHHHhcCCCHH--HHHHHHHHHHhhhhhhhcCCCccccCCCCCCCcccCCC-CchhhHHHHHHHHHH
Q 006131 483 GHMDFRFFTLGNLWAIVSSLGTAR--QNEGILNLIEAKWDDLVAHMPLKICYPALDPWSYHNGG-SWPTLLWQFTLACIK 559 (660)
Q Consensus 483 ~~~d~Rf~slGN~LAilsgLl~~e--qa~~Il~~I~~~w~dL~t~~gLRtl~Pa~~P~SYHNGg-VWP~LLw~~~lA~lK 559 (660)
... .+.+...|.+.+++|+++++ ++.++++.+... .++.+.||.+ .-.++..|+.|. +||-+.|+.+.++.+
T Consensus 401 ~~~-~~~~~~s~f~PLw~g~~~~~~~~a~~v~~~l~~~--~l~~pgGipt--sl~~sg~qWdgPn~W~pl~~l~i~GL~~ 475 (554)
T PLN02567 401 ENQ-NTNVYASNFVPLWCGVVPPGDAKVEKVVESLKSS--GLVLPAGIAT--SLRNTGQQWDFPNAWAPLQHMIVEGLAA 475 (554)
T ss_pred ccc-ccCccHHHHHHHHcCCCChhhHHHHHHHHHHHhc--cCccCCcccC--CCCCccccCCCCCcCHhHHHHHHHHHHH
Confidence 111 12356678999999999986 578899988754 6788999976 235578899999 999999999999999
Q ss_pred cCCcH---HHHHHHH----HH-HhHhcCCCcCccccCCCCCCCCCC-Cc---hhhhhhHHHHHHHHHHhcCCCccc
Q 006131 560 MGRPE---LAQKAVA----MA-EKRLSVDQWPEYYDTQSGRFIGKQ-SR---LHQTWTIAGYLTSKMLLENPAKAS 623 (660)
Q Consensus 560 ~Gr~~---~A~r~L~----~a-~~~L~~~~~pE~FDG~tg~p~G~~-ac---~~QAWSaA~~L~a~~lL~~P~~~~ 623 (660)
+|..+ +|+++-. .. ......+.+.|+||..++...|.+ .. ..+.||.|-+|.+......|.+..
T Consensus 476 yG~~ea~~lA~~la~rwl~~~~~~~~~tg~m~EkYd~~~~~~~GgGGey~~q~GFGWTngV~L~ll~~yg~~~~~~ 551 (554)
T PLN02567 476 SGSKEGKALAEDIARRWLRSNYVAYKKTGAMHEKYDARYCGEVGGGGEYIPQTGFGWSNGVVLSLLEEFGWPEDKK 551 (554)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHhcCceEEeECCCCccccCCCCCCCCCCCcChHHHHHHHHHHHhCCcccCC
Confidence 99875 5655422 22 223366899999998874333321 11 245799999887776666666544
No 14
>PF04685 DUF608: Protein of unknown function, DUF608; InterPro: IPR006775 This domain is found in non-lysosomal glucosylceramidases that catalyze the conversion of glucosylceramide to free glucose and ceramide []. It is involved in sphingomyelin generation and prevention of glycolipid accumulation and may also catalyze the hydrolysis of bile acid 3-O-glucosides, however, the relevance of such activity is unclear in vivo []. ; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0016021 integral to membrane; PDB: 1V7V_A 1V7W_A 1V7X_A.
Probab=99.54 E-value=1.4e-14 Score=156.00 Aligned_cols=285 Identities=16% Similarity=0.174 Sum_probs=94.6
Q ss_pred HHHHHHhcCChHHHHHHHHHHhhhcccccccc---------cCCCCCCCCCCcceeeeccCCCCCCCccceecCCCCCCC
Q 006131 236 SALAFLLNGEGDIVKNFLLHTLQLQSWEKTVD---------CYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESA 306 (660)
Q Consensus 236 Sal~~L~~G~peiar~~L~tla~lQ~~e~~ld---------~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~Ge~~ 306 (660)
++++++ .--|++.+.+++.++..|-.+.+-- .-+...|.||+..- + | ++.|
T Consensus 23 ~s~al~-~lfP~Le~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~G~vphdlg--~---------------p--~~~P 82 (365)
T PF04685_consen 23 ASFALL-KLFPELERSMQRDFADAILSEDNTERKILYDGKIAPRKVRGAVPHDLG--S---------------P--FDDP 82 (365)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccc-cccccccccccccccccccccccccccccccccccccccccccccccc--c---------------c--cccc
Confidence 444433 3469999999999986655542000 00112377786331 0 1 1122
Q ss_pred C---------CcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhhhHHHHHHHHHHHHhCCCCCC-CceeecCCC--ccccc
Q 006131 307 I---------GRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLTDGFDMF-PSLLVTDGS--CMIDR 374 (660)
Q Consensus 307 ~---------~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~~q~~I~~IL~w~l~dgFd~~-p~Llv~dGs--~w~D~ 374 (660)
. .....+|..++||+.+++|+++|||.+|+++ +++.++++|+|+.. ||.. .+|.-+.|. .+.|.
T Consensus 83 ~~~~n~y~~~~~~~~~D~~~~fVL~vyr~~~~TGD~~fL~~--~wp~v~~a~~~~~~--~D~d~dGl~e~~g~~D~TyD~ 158 (365)
T PF04685_consen 83 WDRTNAYNYHDVYAWKDLNPKFVLQVYRDYKWTGDRDFLKE--MWPAVKKAMDYLLS--WDRDGDGLPENPGHPDQTYDD 158 (365)
T ss_dssp ----------------------------------------E--HHHHHHHHHHHHHH--SB--TTS-BEEET---SSSTT
T ss_pred cccccccccccccccccccccccccccccccccccchhhhh--HHHHHHHHHHHHHh--hCCCCCCCCCCCCCCcccccc
Confidence 2 1356899999999999999999999999997 69999999999997 3332 333333343 56683
Q ss_pred cccccCcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhcccccchhhhhhhc
Q 006131 375 RMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKF 454 (660)
Q Consensus 375 rm~r~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ra~aL~~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkF 454 (660)
....|.-.++++||+.||+.+++|++.. ++.+.+++..+.++..++.+++.+|... |..
T Consensus 159 -~~~~G~say~~~L~laAL~A~~emA~~l-gd~~~a~~y~~~~~~~~~~~~~~LWnGe-------------yy~------ 217 (365)
T PF04685_consen 159 -WSMYGPSAYCGGLWLAALRAAAEMAKIL-GDPELAAKYRELAEKAKKAFNKKLWNGE-------------YYR------ 217 (365)
T ss_dssp --EEEEEEHHHHHHHHHHHHHHHHHHHHH-T-HHHHHHHHHHHHHHHHHHHHHSEETT-------------EE-------
T ss_pred -CCeeCCCHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHhhCHh-------------hee------
Confidence 4478888999999999999999999885 6678899999999999999999999532 110
Q ss_pred CCCCCCCccccccccc----CCCCceeeccCCCCccccccccchhHHHH---hcCCCHHHHHHHHHHHHhhhhhhh----
Q 006131 455 NIYPDQIPSWLVDWIP----NEGGYLIGNLEPGHMDFRFFTLGNLWAIV---SSLGTARQNEGILNLIEAKWDDLV---- 523 (660)
Q Consensus 455 ni~p~~ip~wl~~wl~----~~ggYL~g~v~P~~~d~Rf~slGN~LAil---sgLl~~eqa~~Il~~I~~~w~dL~---- 523 (660)
.|+. ...+-+.+ + .+|.-.+-+ -.++++++.++.++.|.+- .+.
T Consensus 218 ------------~~~d~~~~~~~~~~aD-----Q------l~Gqw~a~~~gl~~v~~~e~v~sAL~sI~~~--N~~~~~~ 272 (365)
T PF04685_consen 218 ------------QWYDSKYQNGDGCMAD-----Q------LCGQWWARLLGLGDVLDEEKVKSALRSIYEY--NVKYFLG 272 (365)
T ss_dssp -------------EE---TTS-EES-TT------------SS--EEHHHHHHTT-S-HHHHHHHHHHHHHH--HEE-S-B
T ss_pred ------------eeeccCCCCCCeEEeC-----h------hhHHHHHHHcCCcCCCCHHHHHHHHHHHHHh--cCeEccC
Confidence 0000 00011111 1 123333333 5569999999999999874 444
Q ss_pred cCCCccccCCCC---CCCcccCCCCchhhHHHHHHHHHHcCCcHHHHHHHHHHHhHhc-----CCCcCccccCCC
Q 006131 524 AHMPLKICYPAL---DPWSYHNGGSWPTLLWQFTLACIKMGRPELAQKAVAMAEKRLS-----VDQWPEYYDTQS 590 (660)
Q Consensus 524 t~~gLRtl~Pa~---~P~SYHNGgVWP~LLw~~~lA~lK~Gr~~~A~r~L~~a~~~L~-----~~~~pE~FDG~t 590 (660)
+++|+..+.-+. .+-+.|...|||-+-..+++.++..|..++|.+++..+.++.. .++-||.+++..
T Consensus 273 ~~~G~~n~~~p~g~~~~~~~q~~evW~G~~y~~Aa~mi~~G~~~e~~~~~~~~~~~~~~~~g~~f~~pE~~~~~~ 347 (365)
T PF04685_consen 273 GEMGAVNGVWPDGKPDTSSPQSNEVWTGVEYAVAAHMIQEGMVEEGLEIAKGIYDRYYGRKGNPFNTPEAINADG 347 (365)
T ss_dssp TTTBGGGGS-T----------------------------------------------------------------
T ss_pred CCCcEEEeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 688888765332 2667788889999987777777888999999998887765543 246689988776
No 15
>PRK13272 treA trehalase; Provisional
Probab=99.53 E-value=5.5e-12 Score=141.75 Aligned_cols=341 Identities=14% Similarity=0.160 Sum_probs=223.5
Q ss_pred hHHHHHHHHHHHhhccccCcc-ceeEeec-CCCCCCCCCCCCCcccchHHHHHHHHhcCChHHHHHHHHHHhhhcccccc
Q 006131 188 NIEKEAWKLLRDAVVNYCGNP-VGTVAAN-NPADKQPLNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKT 265 (660)
Q Consensus 188 ~~~~~A~~lLr~~~v~~~~~p-~GtlAA~-~p~~~~~~nY~~vFgRD~vISal~~L~~G~peiar~~L~tla~lQ~~e~~ 265 (660)
.-+..-|..|-+.... +| .+++-.. .|-...+-.|.+++.=|+--.++|+|.+|..++||+.+.-++. .
T Consensus 122 ~~i~~lW~~L~R~~~~---~~~~~Sli~lp~p~iVPGGRFrE~YYWDSY~i~~GLl~s~~~~~a~~mi~Nf~~------~ 192 (542)
T PRK13272 122 EHIDALWPKLVRSQEQ---VPAHSSLLALPHPYVVPGGRFREVYYWDSYFTMLGLVKSGQTTLSRQMLDNFAY------L 192 (542)
T ss_pred HHHHHHHHHhccccCC---CCCcCccccCCCCeeecCCCccchhhhHHHHHHHhhhhcCcHHHHHHHHHHHHH------H
Confidence 3466667777664322 22 2222111 1111235679999999999999999999999999999999983 2
Q ss_pred cccCCCCCCCCCCcceeeeccCCCCCCCccceecCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhhhHHHH
Q 006131 266 VDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGI 345 (660)
Q Consensus 266 ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~~q~~I 345 (660)
++. -|.|||-=++ ||=+=-=.+.|.--+..|++.|||..+.+ ..+.|
T Consensus 193 i~~----yGfIPNG~R~--------------------------YYl~RSQPP~l~~Mv~~~~~~t~d~~~~~---~lp~l 239 (542)
T PRK13272 193 IDT----YGHIPNGNRT--------------------------YYLSRSQPPFFSYMVELQAGVEGDAAYQR---YLPQL 239 (542)
T ss_pred HHH----cCcCcCCchh--------------------------ccccCCCchhHHHHHHHHHHhcChHHHHH---HHHHH
Confidence 334 4899983221 33333334557888899999999988743 24444
Q ss_pred HHHHH-HHHhC-C----CCCCCceeecC-----------------------------------------------C----
Q 006131 346 RLILN-LCLTD-G----FDMFPSLLVTD-----------------------------------------------G---- 368 (660)
Q Consensus 346 ~~IL~-w~l~d-g----Fd~~p~Llv~d-----------------------------------------------G---- 368 (660)
++=.+ |+... + -.......+++ |
T Consensus 240 ~kEy~~Wm~~~~~~~~~~~~~~~v~~~~g~~L~rY~~~~~~PRpEsy~eD~~~a~~~~~~~~~~~Y~~l~a~aESGWDfS 319 (542)
T PRK13272 240 QKEYAYWMQGSDDLQPGQAARHVVRLADGSLLNRYWDERDTPRPEAWLHDTRTAAEAKDRPAAEVYRDLRAGAESGWDYS 319 (542)
T ss_pred HHHHHHHcCCCCCCCCccccceeEecCCCcchhhhcCCCCCCCChHHHHHHHHhcCcccCcHHHHHHHHHHHHhcCCCch
Confidence 43333 33211 0 00000000000 1
Q ss_pred Ccccc-cc-c----cccCcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhcc
Q 006131 369 SCMID-RR-M----GIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYK 442 (660)
Q Consensus 369 s~w~D-~r-m----~r~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ra~aL~~~~~~~FWld~k~l~~i~r~~ 442 (660)
+-|+. .. + ...=.||..|++.|.+-+..+++++.. |+.+.++++.++++.+++.|++.+|-+ .+
T Consensus 320 sRw~~~~~~L~~i~t~~IvpVDLNalL~~~e~~LA~~~~~l-G~~~~a~~~~~~A~~r~~aI~~~lWde-~G-------- 389 (542)
T PRK13272 320 SRWLADGKTLASIRTTAIVPVDLNSLLYHLERTLAQACASS-GLAACSQDYAALAQQRKQAIDAHLWNP-AG-------- 389 (542)
T ss_pred hhhccccccccccCcccccCccHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHhccCc-Cc--------
Confidence 12221 00 0 111248999999999999999998874 556778888899999999999999843 22
Q ss_pred cccchhhhhhhcCCCCCCCcccccccccCCCCceee-ccCCCCccccccccchhHHHHhcCCCHHHHHHHHHHHHhhhhh
Q 006131 443 TEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIG-NLEPGHMDFRFFTLGNLWAIVSSLGTARQNEGILNLIEAKWDD 521 (660)
Q Consensus 443 te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g-~v~P~~~d~Rf~slGN~LAilsgLl~~eqa~~Il~~I~~~w~d 521 (660)
++.+ ++..++.. ..++..|++.+++|+++++|++++++.+.. .
T Consensus 390 --------------------------------~~~DYD~~~~~~~-~~~s~a~f~PLwag~a~~~~a~~l~~~l~~---~ 433 (542)
T PRK13272 390 --------------------------------YYADYDWQTRTLS-EQVTAAALYPLFAGLASDDRAKRTADSVRA---Q 433 (542)
T ss_pred --------------------------------eEEeeccCCCCcc-ccccHHHHHHHHcCCCCHHHHHHHHHHHHH---h
Confidence 2222 12222211 136688999999999999999999998875 5
Q ss_pred hhcCCCccccCCCCCCCcccCCC-CchhhHHHHHHHHHHcCCcHHHHHHHHHHHhHh-----cCCCcCccccCCCCCCC-
Q 006131 522 LVAHMPLKICYPALDPWSYHNGG-SWPTLLWQFTLACIKMGRPELAQKAVAMAEKRL-----SVDQWPEYYDTQSGRFI- 594 (660)
Q Consensus 522 L~t~~gLRtl~Pa~~P~SYHNGg-VWP~LLw~~~lA~lK~Gr~~~A~r~L~~a~~~L-----~~~~~pE~FDG~tg~p~- 594 (660)
++.+.||-+..| ++..|+.|. +||-+.|+++.++.++|..++|+++-....... ..+.+.|+||-. +...
T Consensus 434 ~l~~gGlpTt~~--~sgqQWD~PN~WaPlq~i~i~GL~~yG~~~lA~~La~rwl~~~~~~~~~~g~m~EKYdv~-~~g~~ 510 (542)
T PRK13272 434 LLRPGGLATTAL--KTGQQWDEPNGWAPLQWVAVDGLRRYGEDALARTIGERFLAQVQALFAREHKLVEKYGLD-GNAAG 510 (542)
T ss_pred ccCCCCcCCCCC--CccccCCCCCccHhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhcCceeEEeecC-CCCCC
Confidence 677889887655 578899999 999999999999999999988887766433222 357999999932 2111
Q ss_pred CC----CCchhhhhhHHHHHHHHHHhcCC
Q 006131 595 GK----QSRLHQTWTIAGYLTSKMLLENP 619 (660)
Q Consensus 595 G~----~ac~~QAWSaA~~L~a~~lL~~P 619 (660)
|. .-...+.||.|.+|-+......+
T Consensus 511 GgGGEY~~Q~GFGWTNgV~L~lL~~yg~~ 539 (542)
T PRK13272 511 GGGGEYALQDGFGWTNGVTLMLLNLYPPG 539 (542)
T ss_pred CCCCCcCCCCCCCCHHHHHHHHHHHhccc
Confidence 11 11237899999988766555443
No 16
>COG3387 SGA1 Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=99.50 E-value=8.1e-12 Score=142.67 Aligned_cols=344 Identities=17% Similarity=0.150 Sum_probs=224.2
Q ss_pred HHHHHHHHHHHhhccccCccceeEeecCCCC-C--CCC--CCCCCcccchHHHHHHHHhcCChHHHHHHHHHHhhhcccc
Q 006131 189 IEKEAWKLLRDAVVNYCGNPVGTVAANNPAD-K--QPL--NYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWE 263 (660)
Q Consensus 189 ~~~~A~~lLr~~~v~~~~~p~GtlAA~~p~~-~--~~~--nY~~vFgRD~vISal~~L~~G~peiar~~L~tla~lQ~~e 263 (660)
.+.+..-.|+.. .-.|.|.+.|+.... . .+- -|.-+|+||+.++++|++..|..+.++.++..+.+.|..+
T Consensus 245 ~~~rS~l~l~~~----~~~~~G~ivAs~t~~l~~~~~g~~dY~y~W~RD~~~~~~AL~~~G~~~~a~~~f~~l~~~~~~~ 320 (612)
T COG3387 245 ALYRSALVLKAL----NYNPTGAIVASPTTSLPELIGGTRDYRYVWPRDASYAALALLAIGYKKEALRFFEFLPDVQTPN 320 (612)
T ss_pred HHHHHHHHHHHc----ccCCCCcEEEcCCCCccccCCCCCCceEEccCcHHHHHHHHHHcCCHHHHHHHHHHHHHhhCCC
Confidence 444444444443 344666664442222 1 122 3999999999999999999999999999999999888876
Q ss_pred cccccCCCCCC-CCCCcceeeeccCCCCCCCccceecC-CCCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhhh
Q 006131 264 KTVDCYSPGQG-LMPASFKVRTVPLDGGDGTLEEVLDP-DFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDV 341 (660)
Q Consensus 264 ~~ld~~~~~~G-liP~sFKV~h~~~~~~~~~~e~~l~a-D~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~~ 341 (660)
..+...-...| -++. .-.+ ..++. .+--.+|-+.|=.+++..|.+..+|.-+..+. .
T Consensus 321 ~~~~~~y~~~g~~~~~------------------~w~~~~~~~~--~~pv~~~~~a~~~~~ld~~~~~~~~~~~~~~~-~ 379 (612)
T COG3387 321 GKLYHKYSIDGSDLAE------------------SWLPVSGYYN--SFPVRIGNTALVQGALDVYGSIMNDIYFYAKY-Y 379 (612)
T ss_pred CceeeEEecCCCcccc------------------ccccccCCCC--CCceEEcchhhHHHHHHHHHHHHHHHHHHHhh-c
Confidence 53222222222 1111 1111 00111 23345788888999999999999998877653 4
Q ss_pred HHHHHHHHHHHHhCCCCCCCceeecCCCccccccccccCcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHH
Q 006131 342 QTGIRLILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALS 421 (660)
Q Consensus 342 q~~I~~IL~w~l~dgFd~~p~Llv~dGs~w~D~rm~r~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ra~aL~ 421 (660)
+..+..+.+++.+ -=.....+..|+...|-. |.|+-.+..+.-|+||.+|+.||... +++..++.+.+.+..++
T Consensus 380 ~~~~~~~~~~~~~-~~~~~~~~~~p~~~~WEe----r~g~~~yt~~~~~agLd~A~~lA~~~-gd~~~a~~~~~~ad~ik 453 (612)
T COG3387 380 AIYILPAADYLRR-MEKIKANLPTPDFDLWEE----RGGHFTYTKATVYAGLDAAADLAEEF-GDKGSAEHWRKTADELK 453 (612)
T ss_pred chhhHHHHHHHHH-HHhhhcCCCCCccceecc----cCCcccchHHHHHHHHHHHHHHHHHh-CCcHHHHHHHHHHHHHH
Confidence 6666666666655 101122344566677744 45677899999999999999999986 47788888888888888
Q ss_pred HHHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceeeccCC--CC-ccccccccchhHHH
Q 006131 422 FHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEP--GH-MDFRFFTLGNLWAI 498 (660)
Q Consensus 422 ~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g~v~P--~~-~d~Rf~slGN~LAi 498 (660)
+.+.++++... +||+.-...+ .. +|.-.. .+.
T Consensus 454 ~~v~~~~~~~~----------------------------------------~~~f~r~~~~~~~~~vDasll-----~l~ 488 (612)
T COG3387 454 EAVLRRGYAED----------------------------------------GGYFVRSLGRKPDDTVDASLL-----GLV 488 (612)
T ss_pred HHHHHhccccc----------------------------------------CCeeehhcCCCccccccHHHh-----hcc
Confidence 88876665322 1222221111 11 221011 111
Q ss_pred HhcC--CCHHHHHHHHHHHHhhhhhhhcCCC-ccccCCCCC---CCcccCC-CCchhhHHHHHHHHHHcCCcHHHHHHHH
Q 006131 499 VSSL--GTARQNEGILNLIEAKWDDLVAHMP-LKICYPALD---PWSYHNG-GSWPTLLWQFTLACIKMGRPELAQKAVA 571 (660)
Q Consensus 499 lsgL--l~~eqa~~Il~~I~~~w~dL~t~~g-LRtl~Pa~~---P~SYHNG-gVWP~LLw~~~lA~lK~Gr~~~A~r~L~ 571 (660)
.+|+ ++..+....++.|+. +|..+-+ ++ +++ .-.+=++ +.||..-.=++.+++.+|+.+.|+++|.
T Consensus 489 ~fg~i~~~D~~~~~t~~~I~~---~L~~~~~gi~----RY~~~~~d~~~~~~~~w~i~t~Wl~~~~~~~g~~~~a~~ll~ 561 (612)
T COG3387 489 LFGFIPPDDPRILATVEAIER---ELLVDGGGIR----RYNNEYDDGLGGDNGPWIITTLWLSEYYLALGRLDEAKKLLE 561 (612)
T ss_pred ccCccCCCCHHHHHHHHHHHH---HHhhcCCcEE----cCccccccccCCCCCcceeehhHHHHHHHHccchHHHHHHHH
Confidence 3555 344566667777776 5666553 32 222 2222233 4899984446777788999999999999
Q ss_pred HHHhH-hcCCCcCccccCCCCCCCCCCCchhhhhhHHHHHHHHHHhcC
Q 006131 572 MAEKR-LSVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYLTSKMLLEN 618 (660)
Q Consensus 572 ~a~~~-L~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~lL~~ 618 (660)
.++++ ...+-+||=+|-.+|+|.|- .|||||=++++.+...|++
T Consensus 562 ~l~~~a~~~gll~EQv~~~~G~~~g~---~PlawSha~~I~ai~~l~~ 606 (612)
T COG3387 562 WLLAFASPLGLLPEQVDDGSGEPLGA---FPLAWSHAEFIIAIRELEE 606 (612)
T ss_pred HHHHhcCCCCCcchhhcCCCCccCCC---CcchhhhHHHHHHHHHHHh
Confidence 87655 46788999999999988854 4999999999888776654
No 17
>PRK13270 treF trehalase; Provisional
Probab=99.50 E-value=1.7e-11 Score=138.10 Aligned_cols=309 Identities=13% Similarity=0.165 Sum_probs=207.0
Q ss_pred CCCCCCCcccchHHHHHHHHhcCChHHHHHHHHHHhhhcccccccccCCCCCCCCCCcceeeeccCCCCCCCccceecCC
Q 006131 222 PLNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPD 301 (660)
Q Consensus 222 ~~nY~~vFgRD~vISal~~L~~G~peiar~~L~tla~lQ~~e~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD 301 (660)
+-.|.+++.=|+--.++|+|.+|..++||+.+.-++. .++. -|.|||-=++
T Consensus 166 GGRFrE~YYWDSYwi~~GLl~sg~~~~a~~mi~Nf~~------li~~----yGfIPNG~R~------------------- 216 (549)
T PRK13270 166 GGRFSETYYWDSYFTMLGLAESGREDLLKCMADNFAW------MIEN----YGHIPNGNRT------------------- 216 (549)
T ss_pred CCCcccchhhhHHHHHHHhhhcCcHHHHHHHHHHHHH------HHHH----cCcCcCCchh-------------------
Confidence 5579999999999999999999999999999999983 2333 4899983221
Q ss_pred CCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhhhHHHHHHHHHHHHhCC------CCCCCceeecCC-------
Q 006131 302 FGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLTDG------FDMFPSLLVTDG------- 368 (660)
Q Consensus 302 ~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~~q~~I~~IL~w~l~dg------Fd~~p~Llv~dG------- 368 (660)
||-+=-=.+.|...+..|++ +|.+++++ ..+.|++=.++-.... ........+++|
T Consensus 217 -------YYl~RSQPP~l~~Mv~~y~~--~~~~~~~~--~lp~l~~E~~fWm~~~~~~~~~~~~~~~v~~~~g~~L~rY~ 285 (549)
T PRK13270 217 -------YYLSRSQPPVFALMVELFEE--DGVRGARR--YLDHLKMEYAFWMDGAESLIPNQAYRHVVRMPDGSLLNRYW 285 (549)
T ss_pred -------ccccCCCCHhHHHHHHHHHh--cCHHHHHH--HHHHHHHHHHHHcCCCCccCcccccceeEecCCCCcccccc
Confidence 22222233446666788876 45667655 3455544444322110 000000001111
Q ss_pred -------------------------------------------Ccccccc--c----cccCcccchhHHHHHHHHHHHHH
Q 006131 369 -------------------------------------------SCMIDRR--M----GIHGHPLEIQSLFYSALRCSREM 399 (660)
Q Consensus 369 -------------------------------------------s~w~D~r--m----~r~G~PlEVQALwY~ALr~aaeL 399 (660)
+-|+.-. + -..=.||..||+.|.+-+..+++
T Consensus 286 ~~~~~PRpEsyreD~~~a~~~~rp~~~~Y~~lra~aESGWDfSsRW~~~~~~L~~i~T~~iipVDLNaiL~~~e~~LA~~ 365 (549)
T PRK13270 286 DDRDTPRDESWLEDVETAKHSGRPPNEVYRDLRAGAASGWDYSSRWLRDTGRLASIRTTQFIPIDLNAFLYKLESAIANI 365 (549)
T ss_pred CCCCCCCCchhHHHHHhhcccCCchHHHHHHHHHHHHcCCCchhhcccCCcccccccccCcchhhHHHHHHHHHHHHHHH
Confidence 1222100 0 00114899999999999999999
Q ss_pred HhhcCCChHHHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceee-
Q 006131 400 LIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIG- 478 (660)
Q Consensus 400 ~~~~~g~~~~a~~l~~ra~aL~~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g- 478 (660)
++.. |+.+.++.+.+++..+++.|++.+|-+.+++ +.+
T Consensus 366 a~~l-G~~~~a~~~~~~A~~r~~AI~~~LWnee~G~----------------------------------------~~DY 404 (549)
T PRK13270 366 SALK-GEKETEALFRQKASARRDAVNRYLWDDENGI----------------------------------------YRDY 404 (549)
T ss_pred HHHh-CChHHHHHHHHHHHHHHHHHHHhccCcccCe----------------------------------------EEec
Confidence 9874 5667788899999999999999999543332 212
Q ss_pred ccCCCCccccccccchhHHHHhcCCCHHHHHHHHHHHHhhhhhhhcCCCccccCCCCCCCcccCCC-CchhhHHHHHHHH
Q 006131 479 NLEPGHMDFRFFTLGNLWAIVSSLGTARQNEGILNLIEAKWDDLVAHMPLKICYPALDPWSYHNGG-SWPTLLWQFTLAC 557 (660)
Q Consensus 479 ~v~P~~~d~Rf~slGN~LAilsgLl~~eqa~~Il~~I~~~w~dL~t~~gLRtl~Pa~~P~SYHNGg-VWP~LLw~~~lA~ 557 (660)
++.-++. +.++..|++.+++|+++++|++++++.+.. .++.+.|+-+. ..++..|+.|. +||-+.|+++.++
T Consensus 405 D~~~~~~--~~~s~a~f~PLwaG~a~~~qa~~l~~~l~~---~ll~pGGl~tS--~~~sgqQWD~PN~WaPlqwmiieGL 477 (549)
T PRK13270 405 DWRREQL--ALFSAAAIVPLYVGMANHEQADRLANAVRS---RLLTPGGILAS--EYETGEQWDKPNGWAPLQWMAIQGF 477 (549)
T ss_pred ccccCcc--ccccHHHHHHHHhCCCCHHHHHHHHHHHHH---hcccCCCcCCC--CCCCcccCCCCCCCccHHHHHHHHH
Confidence 1222222 246889999999999999999999999875 56677777553 35688999999 8999999999999
Q ss_pred HHcCCcHHHHHHHHHHHhHh-----cCCCcCccccCCCCCCCCC-C----CchhhhhhHHHHHHHHHHhcC
Q 006131 558 IKMGRPELAQKAVAMAEKRL-----SVDQWPEYYDTQSGRFIGK-Q----SRLHQTWTIAGYLTSKMLLEN 618 (660)
Q Consensus 558 lK~Gr~~~A~r~L~~a~~~L-----~~~~~pE~FDG~tg~p~G~-~----ac~~QAWSaA~~L~a~~lL~~ 618 (660)
.++|..++|+++-....... ..+.+.|.||-.++.+.+. . --..+.||.|.+|-+.....+
T Consensus 478 ~ryG~~~lA~~LA~rwl~~~~~~~~~~g~m~EKYdv~~~~g~~GgGGEY~~q~GFGWTNGV~l~~l~~yg~ 548 (549)
T PRK13270 478 KMYGDDLLGDEIARSWLKTVNQFYQEHHKLIEKYHIAGGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGE 548 (549)
T ss_pred HHcCCHHHHHHHHHHHHHHHHHHHhhcCeeEEEecCCCCCCCCCCCCCcCCCCCcCcHHHHHHHHHHHhCC
Confidence 99999988877655432222 3589999999765322211 0 113689999998876655443
No 18
>PF01204 Trehalase: Trehalase; InterPro: IPR001661 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 37 GH37 from CAZY comprises enzymes with only one known activity; trehalase (3.2.1.28 from EC). Trehalase is the enzyme responsible for the degradation of the disaccharide alpha,alpha-trehalose yielding two glucose subunits []. It is an enzyme found in a wide variety of organisms and whose sequence has been highly conserved throughout evolution.; GO: 0004555 alpha,alpha-trehalase activity, 0005991 trehalose metabolic process; PDB: 2JJB_B 2WYN_B 2JG0_A 2JF4_A 3C67_A 3D3I_B 3C69_A 3C68_A 2Z07_B.
Probab=99.44 E-value=2.3e-11 Score=136.44 Aligned_cols=310 Identities=17% Similarity=0.236 Sum_probs=196.9
Q ss_pred CCCCCCCcccchHHHHHHHHhcCChHHHHHHHHHHhhhcccccccccCCCCCCCCCCcceeeeccCCCCCCCccceecCC
Q 006131 222 PLNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPD 301 (660)
Q Consensus 222 ~~nY~~vFgRD~vISal~~L~~G~peiar~~L~tla~lQ~~e~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD 301 (660)
+-.|.+.+.=|+--.++|+|..|..++||+.+.-++. .++.| |.|||--++
T Consensus 123 GGRF~E~YyWDSYfi~~GLl~s~~~~~a~~mi~Nf~~------~i~~y----GfipNg~R~------------------- 173 (512)
T PF01204_consen 123 GGRFREMYYWDSYFIILGLLASGMYETAKGMIENFLY------LIDRY----GFIPNGNRT------------------- 173 (512)
T ss_dssp BTTB-S-BHHHHHHHHHHHHHTT-HHHHHHHHHHHHH------HHHHH----SS--SBSBG-------------------
T ss_pred CCCcccchhHhHHHHHHHHHHcCCHHHHHHHHHHHHH------HHHHh----CcCCCCccH-------------------
Confidence 4478899999999999999999999999999999984 33444 889983222
Q ss_pred CCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhhhHHHHHHHHHHHH-hC----------CCC------------
Q 006131 302 FGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCL-TD----------GFD------------ 358 (660)
Q Consensus 302 ~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~~q~~I~~IL~w~l-~d----------gFd------------ 358 (660)
||-+===.|.+...+.+|++.|+|.+++++ ..+.|.+=++|=. .. ++.
T Consensus 174 -------Yyl~RSQPPlla~mV~~~y~~t~d~~~l~~--~lp~L~ke~~fW~~~~r~~~~~~~~~~~~l~ry~~~~~~pr 244 (512)
T PF01204_consen 174 -------YYLNRSQPPLLAQMVREYYEATKDKAFLRE--ALPALEKEYEFWMDNNRDVRVTGLGKGYGLNRYGDPWNSPR 244 (512)
T ss_dssp -------GGTT---S--HHHHHHHHHHHHHTCHHHHH--HHHHHHHHHHHHCCCEEETTEEEECTSEECCHHHHCHHCT-
T ss_pred -------HhccCCCCchHHHHHHHHHHhcCCHHHHHH--HHHHHHHHHHHHCCCCcceeecCCCccCCcccccCCCCCCc
Confidence 333333456689999999999999999987 3565554444433 10 010
Q ss_pred --CC----------C-----cee-------ecCC----Cccccc-c---------ccccCcccchhHHHHHHHHHHHHHH
Q 006131 359 --MF----------P-----SLL-------VTDG----SCMIDR-R---------MGIHGHPLEIQSLFYSALRCSREML 400 (660)
Q Consensus 359 --~~----------p-----~Ll-------v~dG----s~w~D~-r---------m~r~G~PlEVQALwY~ALr~aaeL~ 400 (660)
.+ + ..+ ..+| +-|+-. . -...-.||..||+.|.+.+.+++|+
T Consensus 245 pEsy~eD~~~a~~~~~~~~~~~~y~~i~saaESGwDfssRw~~~sg~d~~~l~~~~t~~iipVDLNa~L~~~e~~LA~~a 324 (512)
T PF01204_consen 245 PESYREDVETAENFPSERDKEELYRDIASAAESGWDFSSRWFRDSGFDNSNLFTIRTTDIIPVDLNAILYRNEKDLAEFA 324 (512)
T ss_dssp CCCCCHHHHHHHCHCHTSTCHHHHCHHHHHHHCCHHCTGGGBSSECCEE-TCHHCECCCEE-HHHHHHHHHHHHHHHHHH
T ss_pred chHHHhhHHHHHhhcccchHHHHhhcccchhhhhhhccceeeecCCCchhhhhccceeeecCchHHHHHHHHHHHHHHHH
Confidence 00 0 000 0011 123211 0 0111247999999999999999999
Q ss_pred hhcCCChHHHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceee-c
Q 006131 401 IVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIG-N 479 (660)
Q Consensus 401 ~~~~g~~~~a~~l~~ra~aL~~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g-~ 479 (660)
+.. |+.+.++...+++..+++.|+++||-+.+++ +++ +
T Consensus 325 ~~l-G~~~~a~~~~~~A~~~~~aI~~~lWdee~g~----------------------------------------~~Dyd 363 (512)
T PF01204_consen 325 ELL-GDQEKAEEYRQRAEERKEAINQYLWDEEDGF----------------------------------------YYDYD 363 (512)
T ss_dssp HHT-T-HHHHHHHHHHHHHHHHHHHHHTEETTTTE----------------------------------------E--EE
T ss_pred HHc-CchhHHHHHHHHHHHHHHHHHHhCccCCCCe----------------------------------------EEeee
Confidence 884 6788899999999999999999999654432 222 1
Q ss_pred cCCCCccccccccchhHHHHhcCCCHHHHHHHHHHHHhhhhhhhcCCCcc----ccCCCCCCCcccCCC-CchhhHHHHH
Q 006131 480 LEPGHMDFRFFTLGNLWAIVSSLGTARQNEGILNLIEAKWDDLVAHMPLK----ICYPALDPWSYHNGG-SWPTLLWQFT 554 (660)
Q Consensus 480 v~P~~~d~Rf~slGN~LAilsgLl~~eqa~~Il~~I~~~w~dL~t~~gLR----tl~Pa~~P~SYHNGg-VWP~LLw~~~ 554 (660)
+..+ ...+..+..+++.+++|+++++|+.++++.+.. .+.....+. +-.+..++..|..|+ +||-+.|+.+
T Consensus 364 ~~~~-~~~~~~~~a~f~PL~ag~a~~~qa~~~~~~~l~---~~~~~~~l~~~~g~~ts~~~~~~qWD~Pn~WaPlq~~~i 439 (512)
T PF01204_consen 364 LRTG-KRSPVFSPANFLPLWAGIASPEQAERLVARALD---YLERSGLLTFPGGIPTSLYDTGQQWDGPNVWAPLQWMAI 439 (512)
T ss_dssp TTTT-EEGG--BGGGGHHHHTT-S-HHHHHHHHHHHHH---HCTTCCSSC-CSECTTCTTTTTSTTSTTEEEHHHHHHHH
T ss_pred CCCC-CCcccccHHHHHHHHHhhcCHhhhhhHHHHHHH---HHHhcCCcccCCCCCCccccccccCCCCCccHhHHHHHH
Confidence 1111 112346778899999999999999888777765 233333333 112334488999999 7999999999
Q ss_pred HHHHHcCCcHHHHHHHHHHHhH-----hcCCCcCccccCCCCCCCC-----CCCchhhhhhHHHHHHHHH
Q 006131 555 LACIKMGRPELAQKAVAMAEKR-----LSVDQWPEYYDTQSGRFIG-----KQSRLHQTWTIAGYLTSKM 614 (660)
Q Consensus 555 lA~lK~Gr~~~A~r~L~~a~~~-----L~~~~~pE~FDG~tg~p~G-----~~ac~~QAWSaA~~L~a~~ 614 (660)
.++.++|..++|+++.....+. ...+.+-|.||-..+...| ...-....||.|.+|.+..
T Consensus 440 ~GL~~yG~~~lA~~la~rwl~~~~~~~~~~g~m~EKYd~~~~~~~gg~gGeY~~q~GFGWTNgv~l~~l~ 509 (512)
T PF01204_consen 440 EGLRRYGYRELARRLAQRWLRLNYKVFKRTGKMFEKYDVEDGGEPGGGGGEYPVQDGFGWTNGVYLDLLD 509 (512)
T ss_dssp HHHHHTT-HHHHHHHHHHHHHHHHHCCCCCSSEBSEEETTTTSCEC-S-SSS---BS-HHHHHHHHHHHH
T ss_pred HHHHhCCcHHHHHHHHHHHHHHHHHHHhhcCchhccccceeccccCCCCCcccCCCCCccHHHHHHHHHH
Confidence 9999999998888877654322 2458999999976421211 1112367899999886544
No 19
>PF05592 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; InterPro: IPR008902 This entry consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria [].; PDB: 2OKX_B 3CIH_A.
Probab=99.39 E-value=5.3e-12 Score=139.78 Aligned_cols=292 Identities=22% Similarity=0.285 Sum_probs=177.7
Q ss_pred CCcccchHHHHHHH-HhcCChHHHHHHHHHHhhhcccccccccCCCCCCCCCCcceeeeccCCCCCCCccceecCCCCCC
Q 006131 227 QVFIRDFVPSALAF-LLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGES 305 (660)
Q Consensus 227 ~vFgRD~vISal~~-L~~G~peiar~~L~tla~lQ~~e~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~Ge~ 305 (660)
..|+=|..++++.. ...++.+++|+.|..++. .|.+.|.+|... |..+
T Consensus 148 ~~w~GD~~~~~~~~~~~~~~~~l~~~~l~~~~~----------~q~~~G~~p~~~-------------------P~~~-- 196 (509)
T PF05592_consen 148 LGWTGDARVSALTAYYSFGDAALYRKWLRDFAD----------SQRPDGLLPSVA-------------------PSYG-- 196 (509)
T ss_dssp --BHHHHHHHHHHHHCCT--HHHHHHHHHHHHG----------GTTTSTT-SSBS-------------------S-----
T ss_pred cCCcchHHHHHHHHHHhCCcHHHHHHHHHHHHH----------hhcccCCceEEe-------------------cccC--
Confidence 57999999999995 668899999999999983 344678999732 3321
Q ss_pred CCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhhhHHHHHHHHHHHHhCCCCCCCceeecCC---Cccc----cccccc
Q 006131 306 AIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLTDGFDMFPSLLVTDG---SCMI----DRRMGI 378 (660)
Q Consensus 306 ~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~~q~~I~~IL~w~l~dgFd~~p~Llv~dG---s~w~----D~rm~r 378 (660)
....+..|=+++|++.++.|++.|||.+++++ +.+.|++.|+++....-+ .+....+ .+|. +. ...
T Consensus 197 -~~~~~~~~w~l~~i~~~~~~y~~tGD~~~l~~--~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~DW~~~~~~~-~~~ 269 (509)
T PF05592_consen 197 -GGGFGIPDWSLAWIIIPWDYYLYTGDREFLEE--YYPAMKRYLDYLERRVDD---GLDGLPGWGFGDWLAPGNDG-DGP 269 (509)
T ss_dssp -SSGGGBHHHHHHHHHHHHHHHHHHT-HHHHHH--HHHHHHHHHHHHHTTB-T---SSB-CCSB--S-SS----TT----
T ss_pred -CCCCCCccHHHHHHHHHHHHHHHhCCHHHHHH--HHHHHHHHHHHHHHhCCc---cccCCCCCceeecCCccCcc-ccc
Confidence 11234456688999999999999999999998 699999999999883212 1111112 4666 21 222
Q ss_pred cCcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCC
Q 006131 379 HGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYP 458 (660)
Q Consensus 379 ~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ra~aL~~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p 458 (660)
.+..+-.|++||.||+.+++|++.. |+.+.+++.++++..|++.|+++||-+.+
T Consensus 270 ~~~~~~~~~~~~~~l~~~a~lA~~l-g~~~~a~~y~~~a~~lk~a~~~~~~d~~~------------------------- 323 (509)
T PF05592_consen 270 TPGATITNALYYYALRAAAELAEAL-GKDEDAAEYRARAERLKAAINRHFWDPEK------------------------- 323 (509)
T ss_dssp SCCEEHHHHHHHHHHHHHHHHHHHC-T-HHHHHHHHHHHHHHHHHHHHHCEETTT-------------------------
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHHHHhccCccc-------------------------
Confidence 3344558999999999999999875 56677999999999999999999984322
Q ss_pred CCCcccccccccCCCCceeeccCCCCccccccccchhHHHHhcCCCHHHH-HHHHHHHHhhhhhhhcCCCccccCCCCCC
Q 006131 459 DQIPSWLVDWIPNEGGYLIGNLEPGHMDFRFFTLGNLWAIVSSLGTARQN-EGILNLIEAKWDDLVAHMPLKICYPALDP 537 (660)
Q Consensus 459 ~~ip~wl~~wl~~~ggYL~g~v~P~~~d~Rf~slGN~LAilsgLl~~eqa-~~Il~~I~~~w~dL~t~~gLRtl~Pa~~P 537 (660)
|+|- +. .--.|++|+++|++++++. .++.+.+.+. +...+.+ +....
T Consensus 324 --------------g~~~----~~-------sq~~~alAl~~gl~p~~~~~~~~~~~l~~~----~~~~~~~---~~~g~ 371 (509)
T PF05592_consen 324 --------------GGYA----DG-------SQHANALALLFGLVPEEERAAAALKRLAKR----IAANGYH---LSTGF 371 (509)
T ss_dssp --------------TEEC----TT-------SHCHHHHCHHCCHC-HHHHTCHCHCHCHHC----CHCCCHS-----TCC
T ss_pred --------------Cccc----CC-------chHHHHHHHHhchhhhhhhHHHHHHHHHHH----HHhcCCC---cCccc
Confidence 2111 11 1246899999999987766 6666666542 2222221 11111
Q ss_pred CcccCCCCchhhHHHHHHHHHHcCCcHHHHHHHHHHH-----hHhc--CCCcCccccCCCCC-CCCCCCchhhhhhHHH-
Q 006131 538 WSYHNGGSWPTLLWQFTLACIKMGRPELAQKAVAMAE-----KRLS--VDQWPEYYDTQSGR-FIGKQSRLHQTWTIAG- 608 (660)
Q Consensus 538 ~SYHNGgVWP~LLw~~~lA~lK~Gr~~~A~r~L~~a~-----~~L~--~~~~pE~FDG~tg~-p~G~~ac~~QAWSaA~- 608 (660)
+ |+ |++ ..++.++|+.+.|.+++.... ..+. ...+.|.|++..+. +.... .-+|+.+-
T Consensus 372 --~--g~--~~~----~~~L~~~g~~~~a~~~~~~~~~~~w~~ml~~g~tT~wE~w~~~~~~~~~~S~---~H~w~~~p~ 438 (509)
T PF05592_consen 372 --I--GS--PYL----LEALFRAGRADGAYDLLTQRDYPSWGYMLDQGATTLWEYWDGDGGDPPNRSL---CHAWSAGPT 438 (509)
T ss_dssp --C---C--HHH----HHHHHHCCHHCCHHHHHHHHHHHHCHHHHCTT-SS--SS-STT-TCTT-S-S---SBGGG-THH
T ss_pred --c--cH--HHH----HHHHHHcCCHHHHHHHHHhccccchhHHHhCCCCEEEEecCccCCCCCCCCC---CCCcchhHH
Confidence 1 11 333 334447888888888776421 2233 34789999974421 12222 55798885
Q ss_pred HHHHHHHhc-CCCccccccc
Q 006131 609 YLTSKMLLE-NPAKASLLFW 627 (660)
Q Consensus 609 ~L~a~~lL~-~P~~~~~~~~ 627 (660)
..+.+.++. .|...+.=.+
T Consensus 439 ~~l~~~v~GI~p~~pG~~~~ 458 (509)
T PF05592_consen 439 YWLYRYVLGIRPTEPGFKEF 458 (509)
T ss_dssp HHHHHCTS-EEESSGGGSEE
T ss_pred HHHHHHhhceEeCCCCCcEE
Confidence 455555554 5666554333
No 20
>PF03200 Glyco_hydro_63: Mannosyl oligosaccharide glucosidase; InterPro: IPR004888 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of eukaryotic enzymes belonging to glycosyl hydrolase family 63 (GH63 from CAZY). They catalyse the specific cleavage of the non-reducing terminal glucose residue from Glc(3)Man(9)GlcNAc(2). Mannosyl oligosaccharide glucosidase 3.2.1.106 from EC is the first enzyme in the N-linked oligosaccharide processing pathway. ; GO: 0004573 mannosyl-oligosaccharide glucosidase activity, 0009311 oligosaccharide metabolic process
Probab=99.13 E-value=4.9e-09 Score=123.29 Aligned_cols=325 Identities=14% Similarity=0.145 Sum_probs=178.9
Q ss_pred cCChHHHHHHHHHHhhhcccccccccCCCCCCCCCCcceeeeccCCCCCCCccceecCCC-CCCCCCcccCCCcHHHHHH
Q 006131 243 NGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDF-GESAIGRVAPVDSGLWWII 321 (660)
Q Consensus 243 ~G~peiar~~L~tla~lQ~~e~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~-Ge~~~~yygsVDAtLWfII 321 (660)
.=++++++++|.+.+.|. ...|-||.+= |+-+.-| ..+-+.| =+.| ...+| |=++.
T Consensus 412 ~wD~dls~eil~sWl~lm----------~~dGWIpREQ-ILG~EAr-------skVP~eF~vQ~p-~~ANP----PTl~l 468 (801)
T PF03200_consen 412 RWDPDLSLEILASWLDLM----------NEDGWIPREQ-ILGEEAR-------SKVPAEFQVQYP-SNANP----PTLFL 468 (801)
T ss_pred HhCHHHHHHHHHHHHHhc----------cccCCchhhh-hcCHhHH-------hcCCHHHHcCCC-CCCCC----ccHHH
Confidence 458999999999998533 2457777531 2221100 0111112 1111 01122 22455
Q ss_pred HHHHHHHH---h--------CcHhHHHhhhhHHHHHHHHHHHHh-C-CC--CCC------Cc--eeec---CCCcccccc
Q 006131 322 LLRAYGKI---T--------GDYALQERVDVQTGIRLILNLCLT-D-GF--DMF------PS--LLVT---DGSCMIDRR 375 (660)
Q Consensus 322 al~~Y~k~---T--------GD~~f~~~~~~q~~I~~IL~w~l~-d-gF--d~~------p~--Llv~---dGs~w~D~r 375 (660)
++.++.+. . .+.+|+++ +.|.|++=.+|... + |- ..| ++ ...+ -.+-| | .
T Consensus 469 ~l~~ll~~~~~~~~~~~~~~~~~~~l~~--~yp~L~~~~~wf~~tQ~G~~~~~yrWrGr~~~~~~~lnp~~L~SGl-D-D 544 (801)
T PF03200_consen 469 ALEKLLDRLKAEKKSEDNSEEDLEFLRR--IYPRLKRWYNWFNTTQAGDIPGSYRWRGRDPTTDRELNPHTLTSGL-D-D 544 (801)
T ss_pred HHHHHHHHHhhccccccchHHHHHHHHH--HHHHHHHHHHHHhhccCCCCCCceeEcCCCCCccccccccCcCCCC-C-C
Confidence 66555332 1 35678887 59999999999864 1 11 111 11 0111 12223 4 3
Q ss_pred ccccCcc------cchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhhhhcchhhhh-Hhhhcccccchh
Q 006131 376 MGIHGHP------LEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKIN-EIYRYKTEEYSA 448 (660)
Q Consensus 376 m~r~G~P------lEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ra~aL~~~~~~~FWld~k~l~-~i~r~~te~y~~ 448 (660)
.||.-+| |.-.+..+.+-+.|++||..++...+.. ...+....|+..+++.-|-+..++| +.-. .++..
T Consensus 545 YPRa~~p~~~e~hvDl~sWMa~~a~~M~~IA~~L~~~d~~~-ef~~~~~~i~~~l~~~hWdeedgfYyD~~~-~~~~v-- 620 (801)
T PF03200_consen 545 YPRASHPSDSERHVDLTSWMAFFALNMARIALELGKEDDAY-EFFEHFEYISDALNKLHWDEEDGFYYDVGL-HPDAV-- 620 (801)
T ss_pred CCCCCCCCccceechHHHHHHHHHHHHHHHHHHhcCcccHH-HHHHHHHHHHHHHHHhcCCcccCceeeecc-ccccc--
Confidence 6776554 5566677777788888887754433333 3556666777788888898777743 2221 11100
Q ss_pred hhhhhcCCCCCC-Cc-ccccccccCCCCceeeccCCCCccccccccchhHHHHhcCCCH--HHHHHHHHHHHhhhhhhhc
Q 006131 449 DAINKFNIYPDQ-IP-SWLVDWIPNEGGYLIGNLEPGHMDFRFFTLGNLWAIVSSLGTA--RQNEGILNLIEAKWDDLVA 524 (660)
Q Consensus 449 ~a~nkFni~p~~-ip-~wl~~wl~~~ggYL~g~v~P~~~d~Rf~slGN~LAilsgLl~~--eqa~~Il~~I~~~w~dL~t 524 (660)
.+......+.. .+ .++........-.++. +. ...+...++.+|+++ ++.++|++.+.. -+++++
T Consensus 621 -~l~~~~~~~~~~~~~~~~r~~~~~~~~~~v~-----~~-----Gyvsl~Plll~ll~~ds~~L~~~L~~l~D-~~ef~s 688 (801)
T PF03200_consen 621 -RLEWKEVLENGQFRRELVRVVRGEPQLQLVC-----HF-----GYVSLFPLLLGLLPPDSERLERLLERLLD-EDEFWS 688 (801)
T ss_pred -eecccccccccccchhheecccCCcccccee-----ee-----cccCCCchhhccCCCCHHHHHHHHHHhcC-hhhccC
Confidence 00000000000 00 0111110000000110 00 111333456778775 477889999974 258999
Q ss_pred CCCccccCCCCC---------CCcccCCCCchhhHHHHHHHHHHcCCc-----HHHHHHHH--------HHHhHh-cCCC
Q 006131 525 HMPLKICYPALD---------PWSYHNGGSWPTLLWQFTLACIKMGRP-----ELAQKAVA--------MAEKRL-SVDQ 581 (660)
Q Consensus 525 ~~gLRtl~Pa~~---------P~SYHNGgVWP~LLw~~~lA~lK~Gr~-----~~A~r~L~--------~a~~~L-~~~~ 581 (660)
++|||+|+...+ +-+|++|.||.-++++++.|+.+++.. +.|.++-. .+.+.. ..+-
T Consensus 689 ~yGirSLSk~~~~y~~~~~e~d~~YWRGpIW~~~NyL~i~aL~~y~~~~g~~~~~a~~~y~~Lr~nli~nv~~~~~~tg~ 768 (801)
T PF03200_consen 689 PYGIRSLSKSDPFYGPGENEHDPSYWRGPIWIPINYLLIEALRRYGYYYGPYQERAKEIYKELRKNLINNVYKEYKRTGY 768 (801)
T ss_pred CCCCccccCCCccccccCCccCCCcccCccchhhHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999999985543 446999999999999999999998853 22322211 122222 3467
Q ss_pred cCccccCCCCCCCCCCCchhhh-hhHHHHHHHH
Q 006131 582 WPEYYDTQSGRFIGKQSRLHQT-WTIAGYLTSK 613 (660)
Q Consensus 582 ~pE~FDG~tg~p~G~~ac~~QA-WSaA~~L~a~ 613 (660)
+-|+|++.||++.|.. +++ ||+.-++++.
T Consensus 769 ~~E~Y~~~tG~g~g~~---~FtGWtslv~~im~ 798 (801)
T PF03200_consen 769 FWEQYNPETGRGQGAH---PFTGWTSLVVLIMA 798 (801)
T ss_pred EEEeECCCCCcccCCC---CCCchHHHHHHHHh
Confidence 8999999999777655 666 9998766543
No 21
>COG3459 Cellobiose phosphorylase [Carbohydrate transport and metabolism]
Probab=99.11 E-value=4.6e-09 Score=122.54 Aligned_cols=273 Identities=21% Similarity=0.285 Sum_probs=194.3
Q ss_pred cchHHHHHHHHhcCChHHHHHHHHHHhhhcccccccccCCCCCCCCCCcceeeeccCCCCCCCccceecCCCCCCCCCcc
Q 006131 231 RDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRV 310 (660)
Q Consensus 231 RD~vISal~~L~~G~peiar~~L~tla~lQ~~e~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~Ge~~~~yy 310 (660)
||..==.+.+++. +|+++|..++.+++.|=.| |-.|+-| +|+.+..---+-
T Consensus 615 RD~~Qd~l~f~~~-~p~~aR~qIl~~as~Qf~e----------Gd~~hWf------------------~p~t~ag~qir~ 665 (1056)
T COG3459 615 RDQLQDTLEFLLA-RPALARKQILDAASRQFVE----------GDVQHWF------------------LPDTYAGVQIRT 665 (1056)
T ss_pred ccccccchhhhhc-CHHHHHHHHHHHHhhcccC----------CCccccc------------------cccccccchhhc
Confidence 8888888888776 5999999999998644433 5566655 122211100034
Q ss_pred cCCCcHHHHHHHHHHHHHHhCcHhHHHh-----------------hhhHHHHHHHHHHHHhCCCCCCCceeecCCCcccc
Q 006131 311 APVDSGLWWIILLRAYGKITGDYALQER-----------------VDVQTGIRLILNLCLTDGFDMFPSLLVTDGSCMID 373 (660)
Q Consensus 311 gsVDAtLWfIIal~~Y~k~TGD~~f~~~-----------------~~~q~~I~~IL~w~l~dgFd~~p~Llv~dGs~w~D 373 (660)
..-|--+|-+.++..|.+.|||.+++++ -.+..+++++|+...+- +.. .++...-|.+|=|
T Consensus 666 ~~sDdvvWl~~a~~~Yl~~TGD~aILdE~iPf~~~~~l~~~s~e~~TLyEH~~rAld~av~r-~g~-~glpli~gGDWND 743 (1056)
T COG3459 666 SISDDVVWLLKAIADYLKETGDAAILDEVIPFIDGPALPEFSKEQATLYEHCARALDLAVAR-LGP-HGLPLILGGDWND 743 (1056)
T ss_pred ccCCceeeeHHHHHHHHHhcCcHhhhhccccccCCCccccccccchhHHHHHHHHHHHHHHh-cCC-CCcccccCCcccc
Confidence 5678999999999999999999998763 12455677777777652 111 2233334678988
Q ss_pred ccccc---c--CcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhcccccchh
Q 006131 374 RRMGI---H--GHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSA 448 (660)
Q Consensus 374 ~rm~r---~--G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ra~aL~~~~~~~FWld~k~l~~i~r~~te~y~~ 448 (660)
. |-+ . |.-+=+=-+.+.+|+...+|++. .++.+.+.++.+-+++++..+.++=|-
T Consensus 744 ~-ln~vg~~g~geSv~lgW~l~~tlq~F~~lak~-r~d~~r~~~~~~~~ea~~~~~~~~~wD------------------ 803 (1056)
T COG3459 744 G-LNLVGNGGKGESVWLGWFLALTLQTFKELAKA-RGDEARADTWAKHVEALREALETNGWD------------------ 803 (1056)
T ss_pred c-ccccccCCccceeehhhHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHHHHHhcCCC------------------
Confidence 4 433 3 34566777889999999999987 466788888888888887777666663
Q ss_pred hhhhhcCCCCCCCcccccccccCCCCceeeccCCCCccccccccchhHHHHhcCCCHHHHHHHHHHHHhhhhhhhcCCCc
Q 006131 449 DAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGHMDFRFFTLGNLWAIVSSLGTARQNEGILNLIEAKWDDLVAHMPL 528 (660)
Q Consensus 449 ~a~nkFni~p~~ip~wl~~wl~~~ggYL~g~v~P~~~d~Rf~slGN~LAilsgLl~~eqa~~Il~~I~~~w~dL~t~~gL 528 (660)
++|...=..+.|-+| | .|..--++.+++++.+++++|..+++++++-|+.|++ .|+.|.||
T Consensus 804 -------------g~wy~r~~~d~g~~l-g--s~e~~E~qI~~i~qs~sVlSg~gd~~ra~kaMd~v~k---~L~~pdgv 864 (1056)
T COG3459 804 -------------GEWYRRGYGDDGTPL-G--SPEDEECQIDSIPQSWSVLSGEGDKERAEKAMDSVMK---YLVDPDGV 864 (1056)
T ss_pred -------------cceEEeccccCCCcc-c--CCCCcccceeeeccchhhhhCCCChHHHHHHHHHHHH---hccCcccc
Confidence 111100001122233 2 3444455667899999999999999999999999988 89999999
Q ss_pred cccCCCCC-------------CCcccCCCCchhhHHHHHHHHHHcCCcHHHHHHHHHH
Q 006131 529 KICYPALD-------------PWSYHNGGSWPTLLWQFTLACIKMGRPELAQKAVAMA 573 (660)
Q Consensus 529 Rtl~Pa~~-------------P~SYHNGgVWP~LLw~~~lA~lK~Gr~~~A~r~L~~a 573 (660)
|.+.|+.. |..--||+...|--.=+++|+.|+|+-++|++.+..+
T Consensus 865 rL~tppf~~~~~~~gyiK~y~pgvREnGgQYtHa~~w~i~Alak~G~a~eAw~~f~~i 922 (1056)
T COG3459 865 RLFTPPFSYTKGDPGYIKRYPPGVRENGGQYTHAATWVILALAKMGRADEAWELFDKI 922 (1056)
T ss_pred EecCCcccccCCCCCeeecCCcccccccceeecccHHHHHHHHhhccHHHHHHHHHhc
Confidence 99999865 6666899999998444556677999999999998865
No 22
>TIGR01535 glucan_glucosid glucan 1,4-alpha-glucosidase. Glucan 1,4-alpha-glucosidase catalyzes the hydrolysis of terminal 1,4-linked alpha-D-glucose residues from non-reducing ends of polysaccharides, releasing a beta-D-glucose monomer. Some forms of this enzyme can hydrolyze terminal 1,6- and 1,3-alpha-D-glucosidic bonds in polysaccharides as well.
Probab=99.10 E-value=1.1e-07 Score=109.61 Aligned_cols=355 Identities=17% Similarity=0.145 Sum_probs=202.2
Q ss_pred ccchHHHHHHHHHHHhhccccCc-cceeE-eecCCC---C-CCC--CCCCCCcccchHHHHHHHHhcCChHHHHHHHHHH
Q 006131 185 EASNIEKEAWKLLRDAVVNYCGN-PVGTV-AANNPA---D-KQP--LNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHT 256 (660)
Q Consensus 185 ~~~~~~~~A~~lLr~~~v~~~~~-p~Gtl-AA~~p~---~-~~~--~nY~~vFgRD~vISal~~L~~G~peiar~~L~tl 256 (660)
+...++.++.-.|+.. ... +.|-+ ||...+ . ... .-|.-||.||+..++.+|+..|..+.++.++..+
T Consensus 248 ~~~~~~~rS~lvLK~~----~d~~~~GAiIAA~Tts~pe~~g~~~n~dYryvW~RD~a~~a~AL~~~G~~~~a~~~~~~l 323 (648)
T TIGR01535 248 KGNSLYYVSMMILKAH----EDKTNPGAYIASLSIPWGDGQADDNTGGYHLVWPRDLYQVANAFLAAGDVDSALRSLDYL 323 (648)
T ss_pred hHHHHHHHHHHHHHHh----cCCCCCCcEEEecCCCCCccCCCCCCCceEEEehhhHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 3456777777777775 233 55555 665221 1 122 3499999999999999999999999999999999
Q ss_pred hhhcccccccccCCCCCCCCCCcceeeeccCCCCCCCccceecCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHH
Q 006131 257 LQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQ 336 (660)
Q Consensus 257 a~lQ~~e~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~ 336 (660)
.+.|..+ |..|..+ + +++. +.-.+ -..|-+=..|++++.+.+ .+.
T Consensus 324 ~~~~~~~----------G~~lq~y---~--vdG~---------~~~~~------iQlD~~g~~i~~~~~l~~--~~~--- 368 (648)
T TIGR01535 324 AKVQQDN----------GMFPQNS---W--VDGK---------PYWTG------IQLDETAFPILLAYRLHR--YDH--- 368 (648)
T ss_pred HHHhccC----------CCcCcee---c--cCCC---------CCCCC------ccccHHHHHHHHHHHHHH--cCc---
Confidence 9877632 3334322 1 1110 11111 446776667777776655 232
Q ss_pred HhhhhHHHHHHHHHHHHhCCCCCCCceeecCCCccccccccccCcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHH
Q 006131 337 ERVDVQTGIRLILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNR 416 (660)
Q Consensus 337 ~~~~~q~~I~~IL~w~l~dgFd~~p~Llv~dGs~w~D~rm~r~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~r 416 (660)
..+++.|+.+++++.+.+ -.++-.-|=- |.|+--.+-+-.|.||.+|++|++.. |+.+.++++.+.
T Consensus 369 --~~~~~~vk~aadfl~~~~-------p~p~~d~WEe----r~g~~~~T~a~v~aaL~~Aa~iA~~~-g~~~~a~~w~~~ 434 (648)
T TIGR01535 369 --AFYDKMLKPAADFIVKNG-------PKTGQERWEE----IGGYSPSTLAAEIAGLTAAADIAEQN-GDAGSAQKYRET 434 (648)
T ss_pred --HHHHHHHHHHHHHHHHcC-------CCCCCCcccc----cCCcCchhHHHHHHHHHHHHHHHHHc-CCcHHHHHHHHH
Confidence 125778999999998832 2344445643 44665677788889999999999975 445678888888
Q ss_pred HHHHHHHHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCCCCCccc-ccccccCCCCceeeccCCCCccccccccchh
Q 006131 417 LSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSW-LVDWIPNEGGYLIGNLEPGHMDFRFFTLGNL 495 (660)
Q Consensus 417 a~aL~~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~w-l~~wl~~~ggYL~g~v~P~~~d~Rf~slGN~ 495 (660)
+..+++.+.++.|-+...+-. ..|..+. .|..-|.. -..-+.+.++-+.+ -..+|. +=+
T Consensus 435 Ad~i~~~i~~~~~~~~g~~~~------~~~f~r~------~~~~~~~~~~~~~~~n~~~~~~~---~~~vDa-----SlL 494 (648)
T TIGR01535 435 ADNWQKLIENWTFTTNGPLGD------GQYYLRI------AGLGDPNADFLINIANGGGVYPE---KEVLDP-----GFL 494 (648)
T ss_pred HHHHHHHHHHhCcCCCcccCC------CCeEEEe------ecCCCCccccccccccccccCCC---CCccCH-----HHH
Confidence 888888998888865421100 0110000 00000000 00000111111111 011221 112
Q ss_pred HHHHhcCCCH--HHHHHHHHHHHhhhhhhhcCCCccccCCCCCCCcc------------cCCCCchhhHHHHHHHHHHcC
Q 006131 496 WAIVSSLGTA--RQNEGILNLIEAKWDDLVAHMPLKICYPALDPWSY------------HNGGSWPTLLWQFTLACIKMG 561 (660)
Q Consensus 496 LAilsgLl~~--eqa~~Il~~I~~~w~dL~t~~gLRtl~Pa~~P~SY------------HNGgVWP~LLw~~~lA~lK~G 561 (660)
....+|+.++ ++-..-++.|++ +|...-|.--+.-.++.--| ..|-.||.+-+=.+.-.+..|
T Consensus 495 ~L~~~G~~~~dDPri~~Tl~aIe~---~L~~~~~~~g~~~RY~~Dgyg~~~~~~~~~~~~~G~~Wpi~T~~~~~y~l~~~ 571 (648)
T TIGR01535 495 ELVRLGVKSPDDPHILATLKEIDS---TIKVDTPKGPSWYRYTHDGYGEPAKTEAYDGTGKGRLWPLLTGERGHYELAAG 571 (648)
T ss_pred HHHHcCCcCCCCHHHHHHHHHHHH---HhccCCCCCCeEEecCCCCCCCcCCCCCccCCcCCceeehhhhHHHHHHHHcC
Confidence 2234787543 455555666654 45543211111112221112 236679999333333323344
Q ss_pred CcHHHHHHHHHHHhHhcC-CCcCccccCCC---------CCCCCCCCchhhhhhHHHHHHHHHHhcCC
Q 006131 562 RPELAQKAVAMAEKRLSV-DQWPEYYDTQS---------GRFIGKQSRLHQTWTIAGYLTSKMLLENP 619 (660)
Q Consensus 562 r~~~A~r~L~~a~~~L~~-~~~pE~FDG~t---------g~p~G~~ac~~QAWSaA~~L~a~~lL~~P 619 (660)
. .|...|.-++.+-.. +=+||=.+..+ |+|.+ +..|=+||=|+|+.+.+-+.+-
T Consensus 572 ~--~a~~~l~~~~~~a~~~g~lpEQV~d~~~~~~~~~~~G~pt~--Sa~PL~WsHA~yi~l~~s~~~g 635 (648)
T TIGR01535 572 K--DATPYLKAMEKFANEGGMIPEQVWDQTDLPSRGLFYGLPTD--SASPLNWAHAEYVKLLRSNIDG 635 (648)
T ss_pred C--hHHHHHHHHHHhcCcCCCcCcccCCCCCCcccccccCCcCC--ccccchhhHHHHHHHHHHhhcC
Confidence 4 366777776665444 56899886555 44433 4469999999999887766543
No 23
>PF00723 Glyco_hydro_15: Glycosyl hydrolases family 15; InterPro: IPR011613 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 15 GH15 from CAZY comprises enzymes with several known activities; glucoamylase (3.2.1.3 from EC); alpha-glucosidase (3.2.1.20 from EC); glucodextranase (3.2.1.70 from EC). Glucoamylase (GA) catalyses the release of D-glucose from the non-reducing ends of starch and other oligo- or poly-saccharides. Studies of fungal GA have indicated 3 closely-clustered acidic residues that play a role in the catalytic mechanism []. This region is also conserved in a recently sequenced bacterial GA []. The 3D structure of the pseudo-tetrasaccharide acarbose complexed with glucoamylase II(471) from Aspergillus awamori var. X100 has been determined to 2.4A resolution []. The protein belongs to the mainly-alpha class, and contains 19 helices and 9 strands. This protein is found in higher organisms, and is represented by phosphorylase kinase subunits.; GO: 0004339 glucan 1,4-alpha-glucosidase activity, 0005976 polysaccharide metabolic process; PDB: 1GAI_A 1GAH_A 1LF6_B 1LF9_A 3EQA_A 1AYX_A 2F6D_A 2FBA_A 1DOG_A 1GLM_A ....
Probab=98.53 E-value=8.6e-06 Score=89.87 Aligned_cols=181 Identities=15% Similarity=0.138 Sum_probs=103.9
Q ss_pred ceeE-eecCCCCCCCCCCCCCcccchHHHHHHHHhcCChH---------------HHHHHHHHHhhhcccccccccCCCC
Q 006131 209 VGTV-AANNPADKQPLNYDQVFIRDFVPSALAFLLNGEGD---------------IVKNFLLHTLQLQSWEKTVDCYSPG 272 (660)
Q Consensus 209 ~Gtl-AA~~p~~~~~~nY~~vFgRD~vISal~~L~~G~pe---------------iar~~L~tla~lQ~~e~~ld~~~~~ 272 (660)
.|.+ ||...+ ...|.-+|.||+++++.+++..|..+ ..+++|..+.++|++...+...+..
T Consensus 23 ~GaiiAsps~s---~pdY~y~W~RD~a~~~~al~~~g~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 99 (448)
T PF00723_consen 23 TGAIIASPSTS---LPDYRYCWVRDAAYTAYALWALGYRDEARAFFYELEQSLVKLMRGYLQPMYRQQGKVNPSGEFQSP 99 (448)
T ss_dssp TT-B-S-SSBS---SSBTCSEEHHHHHHHHHHHHHHT-H--HHHHHTTT-HHHHHHHHHHHHHHHHHHTS-BTTB-TTTT
T ss_pred CCeEEeecccC---CCCCceeecccHHHHHHHHHHhhhhHHHHHHHhhhhHhhhhhhhhhhhhhhhhcCccCCCccccCc
Confidence 6666 554322 22899999999999999987666332 2344566667677764322222111
Q ss_pred CC-CCCCcceeeeccCCCCCCCccceecCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhhhHHH--HHHHH
Q 006131 273 QG-LMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTG--IRLIL 349 (660)
Q Consensus 273 ~G-liP~sFKV~h~~~~~~~~~~e~~l~aD~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~~q~~--I~~IL 349 (660)
.| -.|... ...+ +-.|..+ +.--..|.+-.+++++.+|.+ .| ..+... +.+. |+..+
T Consensus 100 ~~L~~~~~~--~~~~-------------~~~g~~~-w~~~Q~D~~gl~l~~l~~~~~-~g-~~~~~~--~~~~~~I~~~~ 159 (448)
T PF00723_consen 100 EGLHEPGYN--VSGP-------------VRVGNPA-WGRPQNDGPGLRLLALWQYID-SG-LQIIYT--YWEVSFIKNDL 159 (448)
T ss_dssp GGGGTTEEE--TTSE-------------BTTS-B--ES--BTHHHHHHHHHHHHHHH-TT-HHHHHT--HHHHHTHHHHH
T ss_pred cccccceec--CCCC-------------cccCchh-ccCcCCCchHHHHHHHHHHHH-cC-CCcccc--cchhHHHHHHH
Confidence 00 122210 0000 1111110 112368999999999999933 34 444433 4555 89999
Q ss_pred HHHHhCCCCCCCceeecCCCccccccccccCcccc--hhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHH
Q 006131 350 NLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLE--IQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHV 424 (660)
Q Consensus 350 ~w~l~dgFd~~p~Llv~dGs~w~D~rm~r~G~PlE--VQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ra~aL~~~~ 424 (660)
+++.+. + ..||-.-|= -+.|..-. .-+--+.||..++.++... ++...++.+.+.+.++++.+
T Consensus 160 ~yi~~~----w---~~pd~dlWE----e~~g~~~f~~S~~~~~~AL~~a~~~a~~~-g~~~~~~~~~~~a~~i~~~l 224 (448)
T PF00723_consen 160 DYIERN----W---REPDFDLWE----ERNGIHFFTASSAMQWAALLRAANLAELF-GDPGDAERWRETADEIRERL 224 (448)
T ss_dssp HHHHHH----T---TSBEE-TTS----S-EEEEHH--HHHHHHHHHHHHHHHHHHT-T-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH----c---CCcCCcccc----ccCCCCccchhHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHHHHHHh
Confidence 998772 1 112333453 35566555 8888899999999999874 55667777777777777777
No 24
>COG1626 TreA Neutral trehalase [Carbohydrate transport and metabolism]
Probab=98.39 E-value=5.3e-05 Score=85.30 Aligned_cols=312 Identities=17% Similarity=0.245 Sum_probs=197.3
Q ss_pred CCCCCCCCcccchHHHHHHHHhcCChHHHHHHHHHHhhhcccccccccCCCCCCCCCCcceeeeccCCCCCCCccceecC
Q 006131 221 QPLNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDP 300 (660)
Q Consensus 221 ~~~nY~~vFgRD~vISal~~L~~G~peiar~~L~tla~lQ~~e~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~a 300 (660)
.+-.|..+++=|+-..++|++-+|+.++|++.+..++. .++ ..|.|||-= -.+-..
T Consensus 165 PGGRF~ElYyWDsYf~~lGL~esgr~d~a~~Mv~nF~~------~Ie----~yG~IpNgn--------------RtYyLs 220 (558)
T COG1626 165 PGGRFNELYYWDSYFTMLGLAESGRWDLAKGMVDNFAY------EIE----TYGHIPNGN--------------RTYYLS 220 (558)
T ss_pred CCcccccchHHHHHHHHHHHhhcCcHHHHHHHHHHHHH------HHH----HhccccCCc--------------eeeEee
Confidence 45679999999999999999999999999999999882 223 458899821 111111
Q ss_pred CCCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhhhHHHHHHHHH-HHH-hCCCCCCCce--ee--cCC------
Q 006131 301 DFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILN-LCL-TDGFDMFPSL--LV--TDG------ 368 (660)
Q Consensus 301 D~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~~q~~I~~IL~-w~l-~dgFd~~p~L--lv--~dG------ 368 (660)
. -+- +-|-.-+-.|++-.|+. ++++ +.+.+++... |.. ..+++..-.+ .+ .||
T Consensus 221 R-SQP-----------Pff~~Mv~~~~~~~g~~-~~~r--~l~~~~key~~w~~~~~~l~~~~~~~~~~~~~dG~~pe~l 285 (558)
T COG1626 221 R-SQP-----------PFFALMVELVAEHEGVA-ALKR--YLPALIKEYAYWMDGVPSLQPKQGYSRVVTLGDGSPPEVL 285 (558)
T ss_pred c-CCC-----------CcHHHHHHHHHHhhcHH-HHHH--HHHHHHHHHHHHhccCcccCccccceeEEecCCCCchhhh
Confidence 1 122 22445555666667743 3333 2333333333 333 1111111000 00 011
Q ss_pred ------------------------------------------------Ccccccc--cc----ccCcccchhHHHHHHHH
Q 006131 369 ------------------------------------------------SCMIDRR--MG----IHGHPLEIQSLFYSALR 394 (660)
Q Consensus 369 ------------------------------------------------s~w~D~r--m~----r~G~PlEVQALwY~ALr 394 (660)
+-|++-+ .+ .+=.|++-|++.|.-..
T Consensus 286 n~y~dd~~tpr~Esy~~t~~~a~~~~~r~~~eiy~~dRA~reSGwD~ssRw~g~~~~LasIrt~~~~p~dlna~~y~~e~ 365 (558)
T COG1626 286 NRYWDDRDTPRQESYHETIATAKHNPERPLDEIYRDDRAGRESGWDFSSRWLGVPAPLASIRTTSILPVDLNALLYKLEE 365 (558)
T ss_pred hhhhcccCCccchhhhhhHHHhhcCcCCChHhhhcchhhhHhccCcccccccCCCccccceeccccchhhhhhHHHHHHH
Confidence 1122111 00 01136899999999999
Q ss_pred HHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCC
Q 006131 395 CSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGG 474 (660)
Q Consensus 395 ~aaeL~~~~~g~~~~a~~l~~ra~aL~~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~gg 474 (660)
..+.+.+.. ++.+.++...+++++-+..|+.++|.+....+.=|..+.+. + ..
T Consensus 366 ~~~~~~~~~-~~~~~~e~~~~~A~~R~~aI~~ylW~~e~G~~~DYd~k~~~----------------------~----~~ 418 (558)
T COG1626 366 IIANISAIK-GDKETAERYQRKAEARRCAINKYLWDDEAGQYNDYDWKLKK----------------------R----RA 418 (558)
T ss_pred HHHHHHHhc-CchHHHHHHHHHHHHHHHHHHHHccccccceeehhhhhccc----------------------c----cc
Confidence 988887664 46788888999999989999999998866643322111000 0 01
Q ss_pred ceeeccCCCCccccccccchhHHHHhcCCCHHHHHHHHHHHHhhhhhhhcCCCccccCCCCC-CCcccCCCCchhhHHHH
Q 006131 475 YLIGNLEPGHMDFRFFTLGNLWAIVSSLGTARQNEGILNLIEAKWDDLVAHMPLKICYPALD-PWSYHNGGSWPTLLWQF 553 (660)
Q Consensus 475 YL~g~v~P~~~d~Rf~slGN~LAilsgLl~~eqa~~Il~~I~~~w~dL~t~~gLRtl~Pa~~-P~SYHNGgVWP~LLw~~ 553 (660)
| ++..+..+++.|+++++||+.+++.+.. .|..+-||-++.+... -|-|=|| |+=+-|..
T Consensus 419 y--------------~~a~~~~plw~G~a~~era~~~a~~~~~---~l~~pGGl~ast~~s~~QWD~PNg--WaPlq~ia 479 (558)
T COG1626 419 Y--------------LSAAALWPLWVGLATPERAQRLADAALS---MLEQPGGLSASTPRSGQQWDYPNG--WAPLQWIA 479 (558)
T ss_pred c--------------cchhhhhhccCCCCCHHHHHHHHHHHHH---HhcCCCceecccccccccccCCCC--CccHHHHH
Confidence 1 3455677789999999999999999987 6889999998887754 8889998 88899999
Q ss_pred HHHHHHcCCcHHHHHHHHHHH---hHh--cCCCcCccccCCCCC-CCCCCCch----hhhhhHHHHHHHHHHhc
Q 006131 554 TLACIKMGRPELAQKAVAMAE---KRL--SVDQWPEYYDTQSGR-FIGKQSRL----HQTWTIAGYLTSKMLLE 617 (660)
Q Consensus 554 ~lA~lK~Gr~~~A~r~L~~a~---~~L--~~~~~pE~FDG~tg~-p~G~~ac~----~QAWSaA~~L~a~~lL~ 617 (660)
..++.|+|....|.++....+ .++ ..+.+=|-||=..|. +.|..++. ...|+=|.+|....++.
T Consensus 480 ~~gL~ryG~~~la~~ia~rwL~~v~~~~d~~~~~VEKydv~~~~~~~g~~geyp~q~GFGWtNgv~l~lL~~~~ 553 (558)
T COG1626 480 TQGLKRYGYDILADDIARRWLTNVEQFYDYEGKLVEKYDVSRGTGPGGGGGEYPLQDGFGWTNGVVLKLLDLYG 553 (558)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHhhcccceeEeeecccccCCCCCcccCCcccccchhHHHHHHHHhhC
Confidence 999999999877666555432 223 225667777633211 23333333 25899999887666554
No 25
>COG4354 Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]
Probab=98.14 E-value=0.00025 Score=80.31 Aligned_cols=226 Identities=19% Similarity=0.177 Sum_probs=127.9
Q ss_pred CCcHHHHHHHHHHHHHHhCcHhHHHhhhhHHHHHHHHHHHHhCCCCCCCceeecCCC--ccccccccccCcccchhHHHH
Q 006131 313 VDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLTDGFDMFPSLLVTDGS--CMIDRRMGIHGHPLEIQSLFY 390 (660)
Q Consensus 313 VDAtLWfIIal~~Y~k~TGD~~f~~~~~~q~~I~~IL~w~l~dgFd~~p~Llv~dGs--~w~D~rm~r~G~PlEVQALwY 390 (660)
.|-++=|+.++++|.+.|+|.+|+++ +.+.|..+|+|+..-+- ..++|--..|. .-.|. ..+.|+--+.-.||-
T Consensus 441 kDlgp~fVLlvYrdf~~T~D~eFL~e--~y~~iv~~iD~~~~~d~-d~DgiP~~~g~~d~~fDa-~~i~G~ssy~~sl~i 516 (721)
T COG4354 441 KDLGPDFVLLVYRDFKFTNDREFLKE--VYPVIVEAIDWLKRFDQ-DNDGIPENSGAMDNTFDA-TRIQGHSSYCGSLFI 516 (721)
T ss_pred hhcCCcEEeeehhhhhhcccHHHHHH--HHHHHHHHHHHHHhhcc-cCCCCCcccCCccccccc-ceeechhhhhhHHHH
Confidence 45555589999999999999999997 89999999999953110 11222111221 11231 456799999999999
Q ss_pred HHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCCCCCccccccccc
Q 006131 391 SALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIP 470 (660)
Q Consensus 391 ~ALr~aaeL~~~~~g~~~~a~~l~~ra~aL~~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~ 470 (660)
.||-.+.+|....+.. ...+++++....+.... ..|+. .+..+|| ++|+
T Consensus 517 aal~A~l~is~~l~~~-~~~~a~~e~~~~~~~~y--~~~L~-----------------~~~e~~~-----------~~Lw 565 (721)
T COG4354 517 AALIAALEISKYLLDN-AQLEALNEASKNYVDFY--NTWLK-----------------EAREAFN-----------KYLW 565 (721)
T ss_pred HHHHHHHHHHHHHhhh-hhhhhhHHHHHHHHHHH--HHHHH-----------------HHHHHHH-----------Hhcc
Confidence 9999999998865432 11111111111110000 12221 2223333 2222
Q ss_pred CCCCceeeccCCCCccccc---cccchhHHHHhcC---CCHHHHHHHHHHHHhhhhhhhcCC----CccccCCCCCCCcc
Q 006131 471 NEGGYLIGNLEPGHMDFRF---FTLGNLWAIVSSL---GTARQNEGILNLIEAKWDDLVAHM----PLKICYPALDPWSY 540 (660)
Q Consensus 471 ~~ggYL~g~v~P~~~d~Rf---~slGN~LAilsgL---l~~eqa~~Il~~I~~~w~dL~t~~----gLRtl~Pa~~P~SY 540 (660)
| |.|+.-.-+- +-+ -+ -..|...+-+.+| ++.++++++++-|-.- +---+++ ++|--..+.+|-|-
T Consensus 566 N-GkYy~lws~~-~~~-s~lAsQL~Gqfy~~LLgLpdivdhd~~ksal~sIy~l-nf~~~~~~~~n~v~~dgsp~n~~sv 641 (721)
T COG4354 566 N-GKYYILWSNS-GND-SVLASQLCGQFYATLLGLPDIVDHDKIKSALESIYDL-NFNASEYCAANGVRPDGSPVNPLSV 641 (721)
T ss_pred C-ceeEeccccc-Cch-hhhHHHHHhHHHHHHcCCCcccchHHHHHHHHHHHhh-ccccccccccCccCCCCCcCCcccc
Confidence 2 3344422110 000 00 0134444444454 8899999999888641 1111233 33322233448899
Q ss_pred cCCCCchhhHHHHHHHHHHcCCcHHHHHHHHHHHhHh
Q 006131 541 HNGGSWPTLLWQFTLACIKMGRPELAQKAVAMAEKRL 577 (660)
Q Consensus 541 HNGgVWP~LLw~~~lA~lK~Gr~~~A~r~L~~a~~~L 577 (660)
|-=++||=+...+++-++++|..+++-++-+..-+++
T Consensus 642 q~~s~W~gi~F~laa~m~~~Gm~de~~~~~e~~w~~l 678 (721)
T COG4354 642 QPLSVWPGINFALAAHMIQMGMKDEGFELAENVWNQL 678 (721)
T ss_pred cccccccchHHHHHHHHHHhcchhhhhHHHHHHHHHH
Confidence 9999999996666666677888877666655555555
No 26
>KOG2161 consensus Glucosidase I [Carbohydrate transport and metabolism]
Probab=98.03 E-value=0.00067 Score=78.67 Aligned_cols=267 Identities=18% Similarity=0.200 Sum_probs=147.0
Q ss_pred HHHHHHHHHHHh--C----c--HhHHHhhhhHHHHHHHHHHHHhC---------CCCC-----------CCcee-ecCCC
Q 006131 319 WIILLRAYGKIT--G----D--YALQERVDVQTGIRLILNLCLTD---------GFDM-----------FPSLL-VTDGS 369 (660)
Q Consensus 319 fIIal~~Y~k~T--G----D--~~f~~~~~~q~~I~~IL~w~l~d---------gFd~-----------~p~Ll-v~dGs 369 (660)
.+.+++.+.+.. - | .+|+++ +.+-|.+=..|...+ +|+. .++.+ ..+-+
T Consensus 507 Lllav~~~~~~~~~~~~~~~r~~~fL~r--~fprLl~~f~Wf~~sQ~G~~~~~~~~~n~~YrWrGR~~~~~t~lnp~~L~ 584 (849)
T KOG2161|consen 507 LLLAVYRLLNREREMYGREDRSLTFLKR--LFPRLLKWFTWFRKSQEGKNVFEEGFDNEGYRWRGRDLPTGTTLNPHCLS 584 (849)
T ss_pred eHHHHHHHHhhhhhhccccchHHHHHHH--HHHHHHHhhhhhhhcccCCcccccccccceeEeccCCCCCCceecccccc
Confidence 356667664432 1 2 378877 466666667776542 2221 01222 22335
Q ss_pred ccccccccccCcc------cchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhc--
Q 006131 370 CMIDRRMGIHGHP------LEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRY-- 441 (660)
Q Consensus 370 ~w~D~rm~r~G~P------lEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ra~aL~~~~~~~FWld~k~l~~i~r~-- 441 (660)
.||| ..||.-+| |+-=+..+-|-|.+..+++..+..+.........++ .++.+.+.-|-+..+.|. .+
T Consensus 585 SGlD-DyPRAs~Ps~~ElhvDl~~W~~lasrsl~~iae~lg~~~~E~~~a~~e~~-~~e~L~~~HW~ee~~~y~--D~g~ 660 (849)
T KOG2161|consen 585 SGLD-DYPRASHPSVLELHVDLRCWVGLASRSLNRIAEFLGETEAEYATAITELE-CKENLVQNHWSEEDQAYC--DFGN 660 (849)
T ss_pred cccc-ccccccCchHHHHhhhhHHHHHHHHHHHHHHHHHhcchhhhhhhhhhHHH-HHHHHHHhccChhhCeee--eccC
Confidence 6888 68998888 566677788888999888875443322212222222 345666677877666432 12
Q ss_pred ccccchhhhhhhcCCCCCCCccc-----ccccccCCCCceeeccCCCCccccccccchhHHHHhcC--CCHHHHHHHHHH
Q 006131 442 KTEEYSADAINKFNIYPDQIPSW-----LVDWIPNEGGYLIGNLEPGHMDFRFFTLGNLWAIVSSL--GTARQNEGILNL 514 (660)
Q Consensus 442 ~te~y~~~a~nkFni~p~~ip~w-----l~~wl~~~ggYL~g~v~P~~~d~Rf~slGN~LAilsgL--l~~eqa~~Il~~ 514 (660)
.+++. ..++.|..+-.. .++|--+.--+.. ++.. -=+.+.++..| ++.++-.+++++
T Consensus 661 h~~dv------~~~~~p~~g~~~r~~~r~v~~~~p~~e~v~-----~h~G-----YvSl~P~mlrLlp~~S~rL~~~Ldl 724 (849)
T KOG2161|consen 661 HTEDV------SITPEPSIGKQFRGLVRRVDWFVPNLELVD-----RHIG-----YVSLFPFMLRLLPATSPRLTKLLDL 724 (849)
T ss_pred Chhhc------cccccCCcccchhhhheeccccCCcceeee-----cccc-----eeehhhhHHhhcCCCchHHHHHHHH
Confidence 11111 223333222100 1111100000110 0000 00122223333 677888899999
Q ss_pred HHhhhhhhhcCCCccccCCCCC---------CCcccCCCCchhhHHHHHHHHHH-c----CCc-HHHHHHHHHH-H----
Q 006131 515 IEAKWDDLVAHMPLKICYPALD---------PWSYHNGGSWPTLLWQFTLACIK-M----GRP-ELAQKAVAMA-E---- 574 (660)
Q Consensus 515 I~~~w~dL~t~~gLRtl~Pa~~---------P~SYHNGgVWP~LLw~~~lA~lK-~----Gr~-~~A~r~L~~a-~---- 574 (660)
|.. -++++++||||+|+-... +.+|+.|.||=-+..+...|+.+ | |.. ..|+++-+.+ +
T Consensus 725 i~D-~~~lwSpYGlrSLS~~s~yym~~Nte~d~pYWRGpIW~N~NYLiLsaL~~~Y~~~~gp~~~nA~~iyeELRaNlv~ 803 (849)
T KOG2161|consen 725 ISD-ENELWSPYGLRSLSRSSPYYMKRNTEHDPPYWRGPIWMNVNYLILSALRHFYLYVPGPYQSNAAKIYEELRANLVG 803 (849)
T ss_pred hcC-cccccCcchhhhhhhcCCccccccCCCCCcccccceeeehHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHH
Confidence 966 369999999999984432 55799999999887777777666 4 222 3455544433 1
Q ss_pred ---hHh-cCCCcCccccCCCCCCCCCCCchhhhhhHHHHH
Q 006131 575 ---KRL-SVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYL 610 (660)
Q Consensus 575 ---~~L-~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L 610 (660)
... ..+=+-|+||+.+|+-.| |+....||+=-++
T Consensus 804 Nv~k~~~~tG~~wE~Yd~~tG~G~g--a~~FtGWTaLVl~ 841 (849)
T KOG2161|consen 804 NVSKQWQQTGYFWENYDPRTGRGLG--ARHFTGWTALVLL 841 (849)
T ss_pred HHHHHhhccceeeeecCCCCCCccc--cccccchHHHHHH
Confidence 112 446789999999985443 4457779975433
No 27
>PF06824 DUF1237: Protein of unknown function (DUF1237); InterPro: IPR008313 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.; PDB: 2P0V_B 3QSP_B 3QPF_A 3QRY_A 3ON6_A 3QT9_A 3QT3_A 2NVP_A 3P2C_B.
Probab=97.71 E-value=0.0003 Score=77.87 Aligned_cols=337 Identities=17% Similarity=0.174 Sum_probs=171.3
Q ss_pred cCccceeEeecCCCCCCCCCCCCCcccchHHHHHHH--HhcCChHHHHHHHHHHhhhcccccccccCCC------CCCCC
Q 006131 205 CGNPVGTVAANNPADKQPLNYDQVFIRDFVPSALAF--LLNGEGDIVKNFLLHTLQLQSWEKTVDCYSP------GQGLM 276 (660)
Q Consensus 205 ~~~p~GtlAA~~p~~~~~~nY~~vFgRD~vISal~~--L~~G~peiar~~L~tla~lQ~~e~~ld~~~~------~~Gli 276 (660)
...+.=+|..||=. .-|-||+.--..-. |+..++++ +..++.+.+.|..-...|+|.- +-|+-
T Consensus 29 ~~~~~tFViTGDIp--------AmWLRDS~~Q~~pYl~l~~~d~~l-~~li~G~I~rQa~~I~~dPYaNAF~~~~~s~~~ 99 (424)
T PF06824_consen 29 DEDPDTFVITGDIP--------AMWLRDSAAQLRPYLPLAKEDPSL-ARLIRGVINRQARYILIDPYANAFNPPPESGIP 99 (424)
T ss_dssp TSTSEEEE-SBSSS--------SEEHHHHHHHCGGGGGGGCC-HHH-HHHHHHHHHHHHHHHHH-TT-SEEESS-----T
T ss_pred CCCCCeEEEecCch--------hhhccccHhHHHHHHHHhcCCHHH-HHHHHHHHHHHHHHHhcchhhcccCCccccccc
Confidence 34556666777532 68999987654442 56666655 4566677788999888888852 11222
Q ss_pred CCcceeeeccCCCCCCCccceecCCCC-CCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhhhHHHHHHHHHHHHhC
Q 006131 277 PASFKVRTVPLDGGDGTLEEVLDPDFG-ESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLTD 355 (660)
Q Consensus 277 P~sFKV~h~~~~~~~~~~e~~l~aD~G-e~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~~q~~I~~IL~w~l~d 355 (660)
|+.-. + ...+...+.+. ..-+.+==-+||--.||-+.+.|++.|||.+|..+. ...+++.||+-...+
T Consensus 100 ~~~~~--~--------~~~D~~~~~~~~~~v~ErKyElDSL~~~l~La~~y~~~Tgd~~~f~~~-~~~A~~~il~~~~~e 168 (424)
T PF06824_consen 100 PNGNG--H--------WQSDTTEMPYDPPWVWERKYELDSLCYFLQLAYQYWKATGDTSFFDED-WLRAVRLILDTWRTE 168 (424)
T ss_dssp SS-TS--G--------CCGSBS------TTEEE----HHHHHHHHHHHHHHHHHH--GTTSSHH-HHHHHHHHHHHHHHT
T ss_pred ccccC--C--------CCCCccCCCcCCCceeeecchhhhhhHHHHHHHHHHHhhCChhhhhHH-HHHHHHHHHHHHHHH
Confidence 22100 0 00111112110 111113345999999999999999999999998764 799999999988552
Q ss_pred ---CCCCCC------------------cee-------ec-CCCccccc----cccccCcccchhHHHHHHHHHHHHHHhh
Q 006131 356 ---GFDMFP------------------SLL-------VT-DGSCMIDR----RMGIHGHPLEIQSLFYSALRCSREMLIV 402 (660)
Q Consensus 356 ---gFd~~p------------------~Ll-------v~-dGs~w~D~----rm~r~G~PlEVQALwY~ALr~aaeL~~~ 402 (660)
+|++.. +|. +. -|..|--= ..-++||.|--|++.-.+|+.+++|+..
T Consensus 169 q~~t~~~~~~~~~s~Y~F~R~~~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~y~yliPsNm~a~v~L~~laei~~~ 248 (424)
T PF06824_consen 169 QRPTYDEDHEGLPSPYRFQRPTCRPTDTLPNDGRGNPVAYTGLIWSGFRPSDDACIYPYLIPSNMFAVVALEYLAEILRA 248 (424)
T ss_dssp TG------SSSCS-S---BESBSSGGGS-HHHHT-S----SSS-B-SB-TTSSB-SSSEEHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhccccccCCCcceeeccCCCCCccccCCCcCCcCCCCCceecCcCCCCcchhcCcCChHHHHHHHHHHHHHHHHHH
Confidence 232211 111 11 12233211 1356788899999999999999999986
Q ss_pred cCCCh--HHHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceeecc
Q 006131 403 NDGTK--NLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNL 480 (660)
Q Consensus 403 ~~g~~--~~a~~l~~ra~aL~~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g~v 480 (660)
...++ +++++..+-+.+++..|.+|.=++..+...||.|....||. ++.
T Consensus 249 ~~~~~~~~la~~~~~la~eI~~gI~~~giv~h~~~g~iyAYEVDG~G~--------------------------~~~--- 299 (424)
T PF06824_consen 249 LGWDDSAELAERARALADEIRAGIEKHGIVEHPKFGKIYAYEVDGFGN--------------------------HLL--- 299 (424)
T ss_dssp TT-THHHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEE-SEE-SSS---------------------------EE----
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHheEEeCCCCCeEEEEEecCCCC--------------------------ccc---
Confidence 54433 46666666666666666666655544444455554444332 221
Q ss_pred CCCCccccccc-cchhHHHH-hcCC--CHHHHHHHHHHHHhhh-h-hhhcCCCccccCCCCCCCcccC--CCCchhhHHH
Q 006131 481 EPGHMDFRFFT-LGNLWAIV-SSLG--TARQNEGILNLIEAKW-D-DLVAHMPLKICYPALDPWSYHN--GGSWPTLLWQ 552 (660)
Q Consensus 481 ~P~~~d~Rf~s-lGN~LAil-sgLl--~~eqa~~Il~~I~~~w-~-dL~t~~gLRtl~Pa~~P~SYHN--GgVWP~LLw~ 552 (660)
|| ++ .+.+|++. .|-+ +.+-=+.-.+.|.++- + -.+.+-.++- ..|=|= |-+||+-+..
T Consensus 300 ----mD---DANvPSLLSlPylGf~~~~DpvYqnTR~~iLS~~~NPyy~~G~~~~G------iGsPHt~~~~iWPmsl~~ 366 (424)
T PF06824_consen 300 ----MD---DANVPSLLSLPYLGFCSKDDPVYQNTRRFILSPEGNPYYFSGKAASG------IGSPHTPPGYIWPMSLAM 366 (424)
T ss_dssp ----------SSSS-STTHHHHTSS-TT-HHHHHHHHHHTSTT-STTEEEESSEEE------E--TTT-TTEEEHHHHHH
T ss_pred ----cC---CCCCchHhhhhhcCCCCCCcHHHHHHHHHHhCCCCCCccccCCCcCC------CCCCCCCCCCccHHHHHH
Confidence 22 22 44466663 4443 3333333344443320 0 0000001111 122233 3467765555
Q ss_pred HHHHHHHcCCcHHHHHHHHHHH-hHhcCCCcCccccCCCCCCCCCCCchhhhhhHHHH
Q 006131 553 FTLACIKMGRPELAQKAVAMAE-KRLSVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGY 609 (660)
Q Consensus 553 ~~lA~lK~Gr~~~A~r~L~~a~-~~L~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~ 609 (660)
-++. ....++.++.|..+. .....+-+-|=||-+++.-. .|...||+-+.|
T Consensus 367 ~~lT---s~d~~Ei~~~L~~L~~t~~gtGlmHES~d~~~~~~~---TR~WFaWaNslF 418 (424)
T PF06824_consen 367 QGLT---SDDDEEIRECLRMLKRTTAGTGLMHESFDVDDPSKF---TRPWFAWANSLF 418 (424)
T ss_dssp HHHT----S-HHHHHHHHHHHHHTSTTSSS--SEEETTEEEEE---E-S-BHHHHHHH
T ss_pred HHhc---CCCHHHHHHHHHHHHhccCCCCceeccccCCCCccc---CcHHHHHHHHHH
Confidence 4443 345566666666654 34467788999999885323 334899988764
No 28
>KOG0602 consensus Neutral trehalase [Carbohydrate transport and metabolism]
Probab=97.68 E-value=0.0089 Score=68.83 Aligned_cols=317 Identities=16% Similarity=0.176 Sum_probs=189.7
Q ss_pred CCCCCCCCcccchHHHHHHHHhcCChHHHHHHHHHHhhhcccccccccCCCCCCCCCCcceeeeccCCCCCCCccceecC
Q 006131 221 QPLNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDP 300 (660)
Q Consensus 221 ~~~nY~~vFgRD~vISal~~L~~G~peiar~~L~tla~lQ~~e~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~a 300 (660)
.+-.|.+.+.=|+--.+.|+|.++-.+.+|+.+..+.. .++.| |-|||.=++
T Consensus 179 PGgRF~E~YyWDsywii~GLl~S~m~~takGmieNf~~------lV~~y----G~ipNg~R~------------------ 230 (600)
T KOG0602|consen 179 PGGRFRELYYWDSYWIIKGLLASQMFDTAKGMIENFIS------LVDTY----GFIPNGGRV------------------ 230 (600)
T ss_pred cCCceeeeecccHHHHHHhHHhhcccHHHHHHHHHHHH------HHHhc----CcccCCCee------------------
Confidence 35589999999999888898999999999999999873 23444 788983221
Q ss_pred CCCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhhhHHHHHHHHH-HHHhCCCC--CCC-ce--ee---------
Q 006131 301 DFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILN-LCLTDGFD--MFP-SL--LV--------- 365 (660)
Q Consensus 301 D~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~~q~~I~~IL~-w~l~dgFd--~~p-~L--lv--------- 365 (660)
||-+=-=.+.+..-+..|++.|+|.+|+.+. .+.+.+=++ |.....-+ +.. .+ +.
T Consensus 231 --------YYl~RSQPPllt~Mv~~~y~~t~~~~~~~~~--l~tl~kEy~fw~~~~~~~~~~~~~~l~~y~~~~~~prPE 300 (600)
T KOG0602|consen 231 --------YYLNRSQPPLLTGMVYEYYEATNDEQFLKRA--LPTLIKEYEFWTNNRTEDVKDEGKVLSRYRVMGSGPRPE 300 (600)
T ss_pred --------eeeccCCCchhhhhHHHhhhccCcHHHHHHH--HHHHhhheecccCCCccccccCCceeEEEeccCCCCCCc
Confidence 2222222344677789999999999998763 444443333 32221000 000 00 00
Q ss_pred -----------------------------cCCCccccccccccC----------cccchhHHHHHHHHHHHHHHhhcCCC
Q 006131 366 -----------------------------TDGSCMIDRRMGIHG----------HPLEIQSLFYSALRCSREMLIVNDGT 406 (660)
Q Consensus 366 -----------------------------~dGs~w~D~rm~r~G----------~PlEVQALwY~ALr~aaeL~~~~~g~ 406 (660)
+.|-+.--|-+..+| .||-.|+|+++.++.++.+... .|+
T Consensus 301 sy~~d~e~~e~~~t~~~~~~~~~~l~~~aesg~DfSsrw~~~~~t~~~~~t~~~vpvDLN~~~~~~~~i~~y~~~~-~Gd 379 (600)
T KOG0602|consen 301 SYREDFETAEHLKTEKEKQQLYQDLAAAAESGWDFSSRWFAVNGTLSSIGTTDLVPVDLNLLYKWNADIMKYFYVV-DGD 379 (600)
T ss_pred chHHHHHHHhcccchHHHHHHHHHHhhcCcccchhHHHhhccCCcccccccccccccchHHHHHhhHHHHhhhccc-CCC
Confidence 001000000123333 3799999999999999888766 466
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceeeccCCCCcc
Q 006131 407 KNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGHMD 486 (660)
Q Consensus 407 ~~~a~~l~~ra~aL~~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g~v~P~~~d 486 (660)
.+.+...+++.++++..|++.+|-|.... | |-++ +.+..-.
T Consensus 380 ~~~s~~~~~k~~~r~~~i~~vlWde~~g~----------------------------w----------~DYd-~~~~~~~ 420 (600)
T KOG0602|consen 380 PKDSAQFEKKSEQRRAAIQEVLWDEEDGA----------------------------W----------FDYD-LELKKHN 420 (600)
T ss_pred hhHHHHHHHHHHHHHHHHHHhccCCCCCc----------------------------c----------eecc-ccccccC
Confidence 78888999999999999999999654321 1 1111 1211111
Q ss_pred ccccccchhHHHHhcCCCHHH----HHHHHHHHHhhhhhhhc-CCCcccc-CCCCCCCcccCCCCchhhHHHHHHHHHHc
Q 006131 487 FRFFTLGNLWAIVSSLGTARQ----NEGILNLIEAKWDDLVA-HMPLKIC-YPALDPWSYHNGGSWPTLLWQFTLACIKM 560 (660)
Q Consensus 487 ~Rf~slGN~LAilsgLl~~eq----a~~Il~~I~~~w~dL~t-~~gLRtl-~Pa~~P~SYHNGgVWP~LLw~~~lA~lK~ 560 (660)
..+..-|+..++.++.++.+ +..+++.++.. .+++ +.|+.+. +-..+-|-|=|| ||-.-++....+.++
T Consensus 421 -~~~~~sn~~Pl~~~~~~~~~~~~~~~~v~~~le~~--g~~~~p~giP~Sl~~s~eQWD~Pn~--WaP~q~m~~~gl~~~ 495 (600)
T KOG0602|consen 421 -TYFYASNFAPLWAGCYPAPDDDKSVDKVLDYLEKS--GALTFPGGIPTSLSNSGEQWDFPNG--WAPNQHMAIEGLRRA 495 (600)
T ss_pred -CCcCchhhhhhhccCCCcccccchHHHHHHHHHHc--CCcCCCCCCcccCCCchhhccCCCC--CCcceehhhhhhhhc
Confidence 12456688888888887443 55677777654 3222 2344332 222236777775 887744444444588
Q ss_pred CCc---HHHHHHHHH----HH-hHhcCCCcCccccCCC--CCCC-----CCCCchhhhhhHHHHHHHHHHhcCCCcc
Q 006131 561 GRP---ELAQKAVAM----AE-KRLSVDQWPEYYDTQS--GRFI-----GKQSRLHQTWTIAGYLTSKMLLENPAKA 622 (660)
Q Consensus 561 Gr~---~~A~r~L~~----a~-~~L~~~~~pE~FDG~t--g~p~-----G~~ac~~QAWSaA~~L~a~~lL~~P~~~ 622 (660)
|.. +.|.++... .. .....+...|-||=.. |.+- ++| ....|+.|.+|.......+.-..
T Consensus 496 ~~~~~~~~A~kla~~wl~~~~~~~~~~g~~~EKY~vt~~~~~~G~ggEY~~Q--eGFGW~Ng~il~~L~~~g~~~~~ 570 (600)
T KOG0602|consen 496 GNQELQEVALKLAQRWLETNFAVFVDSGGMFEKYDVTRDPGPHGGGGEYEVQ--EGFGWTNGVILDLLKKYGSDLRR 570 (600)
T ss_pred CCHHHHHHHHHHHHHHHHHhhhhhcccCceeEeeccccCCCCCCCCCccccc--cCCCccchhHHHHHHHcCCcccc
Confidence 843 444444432 21 2225578999998443 2111 234 47899999988766655544444
No 29
>COG3538 Uncharacterized conserved protein [Function unknown]
Probab=96.55 E-value=0.29 Score=53.71 Aligned_cols=172 Identities=17% Similarity=0.161 Sum_probs=102.9
Q ss_pred CCcccchHHHHHHH--HhcCChHHHHHHHHHHhhhcccccccccCCCCCCCCCCcceeeeccCCCCCCCccceecCCCCC
Q 006131 227 QVFIRDFVPSALAF--LLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGE 304 (660)
Q Consensus 227 ~vFgRD~vISal~~--L~~G~peiar~~L~tla~lQ~~e~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~Ge 304 (660)
..|.||+.--..-. |+. +-+..|..+..+.+.|.+=.-+|+|--. .-+..+.--|+. + .....|--+|
T Consensus 60 AmWLRDStaQvrPYL~lAk-eD~~l~~li~GlvkrQ~~~i~~DPYANA--Fn~~~n~~Ghq~---D----~T~m~~~vwE 129 (434)
T COG3538 60 AMWLRDSTAQVRPYLPLAK-EDEELRRLIAGLVKRQARYILLDPYANA--FNETANGAGHQT---D----HTEMNPWVWE 129 (434)
T ss_pred HHHHhcchhhhccceeecc-cCHHHHHHHHHHHHHHHHHhhcChhhhh--cccccccCCccc---C----cccccchhhe
Confidence 67999998665553 445 4445556677788888888878888521 111111101110 0 0001111122
Q ss_pred CCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhhhHHHHHHHHHHHHh-CCCC--C-----------CCcee------
Q 006131 305 SAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLT-DGFD--M-----------FPSLL------ 364 (660)
Q Consensus 305 ~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~~q~~I~~IL~w~l~-dgFd--~-----------~p~Ll------ 364 (660)
+=--+||---.|-+++.|.|.|||.+-..+ +...+++.||+.... +... . .++|.
T Consensus 130 ----RKYEiDSLCYPiqLAYl~wk~Tg~t~~Fde-~f~~a~~~il~~~~~eQ~h~~~spY~F~R~t~r~~dTL~~~G~G~ 204 (434)
T COG3538 130 ----RKYEIDSLCYPIQLAYLYWKATGDTSQFDE-DFRQAVETILRVWKVEQDHETDSPYRFERDTDRKSDTLGRAGKGA 204 (434)
T ss_pred ----eeeeccchhhHHHHHHHHHHhcCCccccCH-HHHHHHHHHHHHHhHhhccCCCCCeeeeccccccchhhhhCCCCC
Confidence 444599999999999999999999875543 368888999988643 2111 1 01221
Q ss_pred --ecCCCcccccc----ccccCcccchhHHHHHHHHHHHHHHhhcCCChHHHHHH
Q 006131 365 --VTDGSCMIDRR----MGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAI 413 (660)
Q Consensus 365 --v~dGs~w~D~r----m~r~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l 413 (660)
.+.|.+|--=| -=.+||.|=-|..----|..+.+|+....++++.+++.
T Consensus 205 ~~a~tGM~wSgFRPSDDAC~YgYliPsNmFaVVvl~y~~ei~~~~~~~~~~a~~a 259 (434)
T COG3538 205 PTAPTGMTWSGFRPSDDACEYGYLIPSNMFAVVVLSYLQEILEALPHDAEIARQA 259 (434)
T ss_pred CcCcccceecCcCCCccchhcccccccchhhhhhHHHHHHHHHHccccHHHHHHH
Confidence 22344453211 23468888888888888889999987655566655443
No 30
>KOG2119 consensus Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]
Probab=90.12 E-value=1.1 Score=52.96 Aligned_cols=214 Identities=18% Similarity=0.197 Sum_probs=121.7
Q ss_pred HHHhCcHhHHHhhhhHHHHHHHHHHHHhCCCCCCCceeecCCCccccccc---cccCcccchhHHHHHHHHHHHHHHhhc
Q 006131 327 GKITGDYALQERVDVQTGIRLILNLCLTDGFDMFPSLLVTDGSCMIDRRM---GIHGHPLEIQSLFYSALRCSREMLIVN 403 (660)
Q Consensus 327 ~k~TGD~~f~~~~~~q~~I~~IL~w~l~dgFd~~p~Llv~dGs~w~D~rm---~r~G~PlEVQALwY~ALr~aaeL~~~~ 403 (660)
+..|||..|++. ++|....|++.+++-+-|. +++.-++| +.|.-. -..|---+--+||-+||+.|.+||...
T Consensus 570 ~~~tgd~~flk~--~wpsv~~ime~l~~fDKD~-DGmIEN~G--fpDQTYD~W~~tGvSAYCGgLWlAALqa~~amA~~~ 644 (879)
T KOG2119|consen 570 YVATGDEKFLKA--VWPSVYAIMEYLEQFDKDN-DGMIENEG--FPDQTYDAWSMTGVSAYCGGLWLAALQAASAMARQI 644 (879)
T ss_pred eEEeccHHHHHH--HHHHHHHHHHHHHhhcccC-CcccccCC--CCCccccceEEecchhhhhHHHHHHHHHHHHHHHHh
Confidence 456899999986 6999999998887733232 44555665 223322 224666788899999999999999985
Q ss_pred CCChHHHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceeeccCCC
Q 006131 404 DGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPG 483 (660)
Q Consensus 404 ~g~~~~a~~l~~ra~aL~~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g~v~P~ 483 (660)
|+++......++++.-+....+..|.- ..++|+...-+ +.--|+-||+
T Consensus 645 -g~~~~~~~f~~klekak~~ye~kLWNG-----sYfnyD~s~s~----~s~sImaDQl---------------------- 692 (879)
T KOG2119|consen 645 -GDPNTQDYFNNKLEKAKDVYEKKLWNG-----SYFNYDESSSG----SSSSIMADQL---------------------- 692 (879)
T ss_pred -CChhHHHHHHHHHHHHHHHHHHhhcCC-----ceeccccCCCC----cchhhHHHhH----------------------
Confidence 556666666666665555555556631 00111100000 0000111111
Q ss_pred CccccccccchhHHHHhc---CCCHHHHHHHHHHHHhhhhhhhcCCCcc--------ccCCCCC-CCccc-CCCCchhhH
Q 006131 484 HMDFRFFTLGNLWAIVSS---LGTARQNEGILNLIEAKWDDLVAHMPLK--------ICYPALD-PWSYH-NGGSWPTLL 550 (660)
Q Consensus 484 ~~d~Rf~slGN~LAilsg---Ll~~eqa~~Il~~I~~~w~dL~t~~gLR--------tl~Pa~~-P~SYH-NGgVWP~LL 550 (660)
.|.--+-.+| |.+++..++.+++|..- .-|..+ =+.|.-. +.|+- ---||+=+.
T Consensus 693 --------aGqWy~~a~gl~~i~~~~~vrsAL~tIy~~-----NVm~~~~G~~GAVNGm~p~G~VD~ssiQS~EvW~Gvt 759 (879)
T KOG2119|consen 693 --------AGQWYARACGLPPIFPEEKVRSALDTIYDF-----NVMKFKGGRMGAVNGMLPSGKVDTSSIQSREVWAGVT 759 (879)
T ss_pred --------hhHHHHHhcCCCccCchHHHHHHHHHHHhh-----ceeeecCCceeccccccCCCccccccceehhhhccHH
Confidence 1211112233 47889999999999762 222111 0222211 44443 345999998
Q ss_pred HHHHHHHHHcCCcHHHHHHHHHHHhHh------cC-CCcCccccCCC
Q 006131 551 WQFTLACIKMGRPELAQKAVAMAEKRL------SV-DQWPEYYDTQS 590 (660)
Q Consensus 551 w~~~lA~lK~Gr~~~A~r~L~~a~~~L------~~-~~~pE~FDG~t 590 (660)
.++++-.+.-|..+++-+...+..... .. -.=||-+.+..
T Consensus 760 YalAAtMIqeG~~e~~FqTA~G~y~~~w~~~glg~~FqTPEa~~~~~ 806 (879)
T KOG2119|consen 760 YALAATMIQEGLVEKGFQTASGIYEAIWSETGLGYAFQTPEAWYMED 806 (879)
T ss_pred HHHHHHHHHHhhHHhhhhhhhhhHHHHhhhcccceEEECchhhhcch
Confidence 887777777787777766666543222 11 14477666654
No 31
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5.3.1.8 from EC) reversibly converts N-acyl-D-glucosamine to N-acyl-D-mannosamine, the latter ultimately being converted to cytidine 5'- monophospho-N-acetylneuraminic acid, which is used as a precursor for the synthesis of connective tissues, blood cells and cellular macromolecules. AGE is a renin-binding protein (RnBP), which might act as a cellular rennin inhibitor. AGE functions as a homodimer, where monomer has an alpha(6)/alpha(6)-barrel structure commonly found in glucoamylases and cellulases []. This family contains a number of eukaryotic and bacterial AGE enzymes.; GO: 0004476 mannose-6-phosphate isomerase activity, 0006013 mannose metabolic process; PDB: 1FP3_B 2RGK_B 3GT5_A 2GZ6_B 2ZBL_E 2AFA_A.
Probab=58.46 E-value=2.2e+02 Score=30.49 Aligned_cols=81 Identities=12% Similarity=0.120 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHhhhhhhhcCCC-cc-ccCCCCCCCcccCCCCchhh--HHHHHHHHHHcCCcH---HHHHHHHHHHhHhc
Q 006131 506 RQNEGILNLIEAKWDDLVAHMP-LK-ICYPALDPWSYHNGGSWPTL--LWQFTLACIKMGRPE---LAQKAVAMAEKRLS 578 (660)
Q Consensus 506 eqa~~Il~~I~~~w~dL~t~~g-LR-tl~Pa~~P~SYHNGgVWP~L--Lw~~~lA~lK~Gr~~---~A~r~L~~a~~~L~ 578 (660)
+++.++++...+. .+-...| +- ++...-.|.. .+---||.. +-++..++...|+.. .++++..-+..++.
T Consensus 236 ~~a~~l~~~~~~~--G~d~~~gG~~~~~d~~g~~~~-~~k~wW~q~Eal~a~~~~~~~tg~~~~~~~~~~~~~~~~~~~~ 312 (346)
T PF07221_consen 236 ERARRLFDFALEH--GWDREGGGLFYSVDRDGKPPD-RSKRWWPQAEALKALLAAYELTGDEKYLDWARRVWDYIFRHFI 312 (346)
T ss_dssp HHHHHHHHHHHHH--HBSTTTSSB-SEEETTS-BSS-T-EEHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHTB
T ss_pred HHHHHHHHHHHHh--eEecCCCeEEEEEeCCCCccc-cCccccHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHhCC
Confidence 4556666666553 3333333 22 1212211222 222368887 555555544556653 33444445567776
Q ss_pred CCCcCccccCC
Q 006131 579 VDQWPEYYDTQ 589 (660)
Q Consensus 579 ~~~~pE~FDG~ 589 (660)
+..-.|||+-.
T Consensus 313 d~~~G~W~~~l 323 (346)
T PF07221_consen 313 DPEYGEWFDYL 323 (346)
T ss_dssp -TTTSSB-SEE
T ss_pred CCCCCeeEeeE
Confidence 65566777643
No 32
>COG1554 ATH1 Trehalose and maltose hydrolases (possible phosphorylases) [Carbohydrate transport and metabolism]
Probab=53.27 E-value=5.3e+02 Score=31.91 Aligned_cols=63 Identities=19% Similarity=0.261 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHhhhhhhhcCCCccccCCCCCCCcccCCCCchhhHHHHHHHHHHcCCcHHHHHHHHHH
Q 006131 506 RQNEGILNLIEAKWDDLVAHMPLKICYPALDPWSYHNGGSWPTLLWQFTLACIKMGRPELAQKAVAMA 573 (660)
Q Consensus 506 eqa~~Il~~I~~~w~dL~t~~gLRtl~Pa~~P~SYHNGgVWP~LLw~~~lA~lK~Gr~~~A~r~L~~a 573 (660)
+||.-+|-....+ +++++-.+|.=.--++|..-|+-+-=|-+...+ +| +.|..++|.+....+
T Consensus 601 KQADvlm~~Yl~~--~~F~~~~i~~N~dyY~~rTvh~SSLSp~ihail-a~--~lg~~~~Aye~~~~~ 663 (772)
T COG1554 601 KQADVLMLLYLLP--DLFSPETIKRNFDYYEPRTVHDSSLSPAIHAIL-AA--ELGKRDKAYEYFRRA 663 (772)
T ss_pred hhHHHHHHHHhhh--ccCCHHHhhccceecccccccccccchHHHHHH-Hh--hhCcHHHHHHHHHHH
Confidence 4666555555555 777777777655556688888886655554333 33 789898888776654
No 33
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid. Catalytic mechanism is believed to be via nucleotide elimination and readdition and is ATP modulated. AGE is structurally and mechanistically distinct from the other four types of epimerases. The AGE domain monomer is composed of an alpha(6)/alpha(6)-barrel, the structure of which is also found in glucoamylase and cellulase. The active form is a homodimer. The alignment also contains subtype III mannose 6-phosphate isomerases.
Probab=47.64 E-value=3.8e+02 Score=28.68 Aligned_cols=240 Identities=13% Similarity=0.068 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhCcHhHHHhhhhHHHHHHHHHHHHhCCCCCCCceeecCCCccccccccccCcccchhHHHHHHHHHHHH
Q 006131 319 WIILLRAYGKITGDYALQERVDVQTGIRLILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSRE 398 (660)
Q Consensus 319 fIIal~~Y~k~TGD~~f~~~~~~q~~I~~IL~w~l~dgFd~~p~Llv~dGs~w~D~rm~r~G~PlEVQALwY~ALr~aae 398 (660)
.|.++..+++.+||.+.++. ...++.-+.+.+....+..+...+-.+| .....++-++.|++.-.||-.+.+
T Consensus 58 ~i~~~a~a~~~~~~~~~l~~--A~~~~~fl~~~~~d~~~Gg~~~~~~~~g------~~~~~~~~l~~~a~~l~ala~~~~ 129 (384)
T cd00249 58 QVYCFAVAYLLGWRPEWLEA--AEHGLEYLDRHGRDPDHGGWYFALDQDG------RPVDATKDLYSHAFALLAAAQAAK 129 (384)
T ss_pred HHHHHHHHHHhcCChhHHHH--HHHHHHHHHHhCcCCCCCCEEEEEcCCC------CCcccccchHHHHHHHHHHHHHHH
Q ss_pred HHhhcCCChHHHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceee
Q 006131 399 MLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIG 478 (660)
Q Consensus 399 L~~~~~g~~~~a~~l~~ra~aL~~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g 478 (660)
.... .+..+.+.++-..+.++|| ++.|+|+.-
T Consensus 130 at~d--------~~~l~~A~~~~~~l~~~~~----------------------------------------~~~g~~~~~ 161 (384)
T cd00249 130 VGGD--------PEARALAEETIDLLERRFW----------------------------------------EDHPGAFDE 161 (384)
T ss_pred hcCC--------HHHHHHHHHHHHHHHHHhc----------------------------------------cCCCcccCC
Q ss_pred ccC-----CCCccccccccchhHHHHhcCCCH---HHHHHHHHHHHhhhhhhhcCCCccccCCCCCCCcccCCC-Cchhh
Q 006131 479 NLE-----PGHMDFRFFTLGNLWAIVSSLGTA---RQNEGILNLIEAKWDDLVAHMPLKICYPALDPWSYHNGG-SWPTL 549 (660)
Q Consensus 479 ~v~-----P~~~d~Rf~slGN~LAilsgLl~~---eqa~~Il~~I~~~w~dL~t~~gLRtl~Pa~~P~SYHNGg-VWP~L 549 (660)
.-. |+ .+.-...+-.++.+..-..++ ++++.+++.+.....+--.+.=..+....-.|..-..|- +||--
T Consensus 162 ~~~~~~~~~~-~~~~~h~~~all~l~~~tgd~~~~~~A~~l~~~~~~~~~~~~~G~~~e~~~~~~~~~~~~~~~~~~Pgh 240 (384)
T cd00249 162 ADPGTPPYRG-SNPHMHLLEAMLAAYEATGEQKYLDRADEIADLILDRFIDAESGVVREHFDEDWNPYNGDKGRHQEPGH 240 (384)
T ss_pred CCCCCCCCCC-CChhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCcccCeEEEEECCCCCCCcCcCCCcCCCch
Q ss_pred ----HHHHHHHHHHcCCc---HHHHHHHHHHHhHhcCCCcCcccc-CCCCCCCCCCCchhhhhhHHHHHHHHHHh
Q 006131 550 ----LWQFTLACIKMGRP---ELAQKAVAMAEKRLSVDQWPEYYD-TQSGRFIGKQSRLHQTWTIAGYLTSKMLL 616 (660)
Q Consensus 550 ----Lw~~~lA~lK~Gr~---~~A~r~L~~a~~~L~~~~~pE~FD-G~tg~p~G~~ac~~QAWSaA~~L~a~~lL 616 (660)
.|.+.......|.. +.|++++..+.++.-+..-..+|+ ..+.... +.....-.|..++.+.+...+
T Consensus 241 ~~e~a~~ll~l~~~~~~~~~~~~a~~~~~~~~~~~~d~~~G~~~~~~~~~~~~-~~~~~~~~w~~~E~~~a~~~l 314 (384)
T cd00249 241 QFEWAWLLLRIASRSGQAWLIEKARRLFDLALALGWDPERGGLYYSFLDDGGL-LEDDDKRWWPQTEALKAALAL 314 (384)
T ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhCcCccCCCEEEeeECCCCC-cccccccccHHHHHHHHHHHH
No 34
>PF03632 Glyco_hydro_65m: Glycosyl hydrolase family 65 central catalytic domain; InterPro: IPR005195 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The family of glycosyl hydrolases (GH65 from CAZY) which contains this domain includes vacuolar acid trehalase and maltose phosphorylase. Maltose phosphorylase (MP) is a dimeric enzyme that catalyzes the conversion of maltose and inorganic phosphate into beta-D-glucose-1-phosphate and glucose. The central domain is the catalytic domain, which binds a phosphate ion that is proximal the the highly conserved Glu. The arrangement of the phosphate and the glutamate is thought to cause nucelophilic attack on the anomeric carbon atom []. The catalytic domain also forms the majority of the dimerisation interface.; GO: 0003824 catalytic activity, 0005975 carbohydrate metabolic process; PDB: 1H54_A.
Probab=46.04 E-value=55 Score=36.49 Aligned_cols=152 Identities=16% Similarity=0.113 Sum_probs=72.4
Q ss_pred CCCCCcccch-HHHHHHHHhcCChHHHHHHHHHHhhh--cccccccccCCCCCCCCCCcceeeeccCCCCCCCccceecC
Q 006131 224 NYDQVFIRDF-VPSALAFLLNGEGDIVKNFLLHTLQL--QSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDP 300 (660)
Q Consensus 224 nY~~vFgRD~-vISal~~L~~G~peiar~~L~tla~l--Q~~e~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~a 300 (660)
.|..-.==|+ +...+.++.+ +||+||+.|..=.+. |++++. + ..|.-=+.| |-+- +
T Consensus 29 ~Y~Gh~FWDtE~~~~P~~~~~-~Pe~Ar~lL~YR~~~L~~Ar~~A--~---~~g~~GA~y-----PWeS----------~ 87 (370)
T PF03632_consen 29 GYKGHVFWDTEIFMLPFFLLT-HPEAARSLLNYRYRTLPQARENA--R---EYGYKGAMY-----PWES----------A 87 (370)
T ss_dssp TTTTSB-THHHHCHHHHHHHS--HHHHHHHHHHHHTTHHHHHHHH--H---CTT--S---------SSB----------S
T ss_pred CcCCeeeecchHHhcchHhhc-CHHHHHHHHHHHHHHHHHHHHHH--H---HcCCCccee-----eccc----------c
Confidence 4554433576 4445555666 899999999764321 333331 1 122222222 1111 2
Q ss_pred CCCCCCCC--ccc--CCCcHHHHHHHHHHHHHHhCcHhHHHhhhhHHHHHHHHHHH-HhCCCCCCCceeecCCCcccccc
Q 006131 301 DFGESAIG--RVA--PVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLC-LTDGFDMFPSLLVTDGSCMIDRR 375 (660)
Q Consensus 301 D~Ge~~~~--yyg--sVDAtLWfIIal~~Y~k~TGD~~f~~~~~~q~~I~~IL~w~-l~dgFd~~p~Llv~dGs~w~D~r 375 (660)
++|+..-+ .++ -+=-+.--..++++|+..|||.+|+++- -.+-|..+-.+. ..-.|+... |..-++..
T Consensus 88 ~~G~E~t~~~~~~~~e~Hi~adIa~a~~~Y~~~TgD~~~l~~~-g~eil~etArfw~sr~~~~~~~------g~y~i~~V 160 (370)
T PF03632_consen 88 RTGEECTGPWPAGDYEIHINADIAYAIWQYYQATGDEEFLREY-GAEILFETARFWASRVEYNEDT------GRYEIRNV 160 (370)
T ss_dssp S-SSB----HHHHTT-THHHHHHHHHHHHHHHHH---TTTTTH-HHHHHHHHHHHHHHH-EEETTT------TEEE--SB
T ss_pred cCccccCCCCCchHhhhcchHHHHHHHHHHHHhCCcHHHHHcc-CHHHHHHHHHHHHHheEEcCCC------CeEEeccc
Confidence 22311111 111 1222444577899999999999999762 345554444444 332233321 22222222
Q ss_pred ccccC------cccchhHHHHHHHHHHHHHHhhc
Q 006131 376 MGIHG------HPLEIQSLFYSALRCSREMLIVN 403 (660)
Q Consensus 376 m~r~G------~PlEVQALwY~ALr~aaeL~~~~ 403 (660)
|+-.- .-.++|+..=..|+.|.+++...
T Consensus 161 ~GPDEY~~~V~NnayTN~ma~~~L~~A~~~~~~~ 194 (370)
T PF03632_consen 161 TGPDEYHENVDNNAYTNAMAKWNLRLAAEAAERL 194 (370)
T ss_dssp --SSTTS-SBS--HHHHHHHHHHHHHHHHHHTTS
T ss_pred CchhcccCCCCCcHHHHHHHHHHHHHHHHHHHHC
Confidence 22221 23799999999999999999875
No 35
>TIGR01507 hopene_cyclase squalene-hopene cyclase. SHC is an essential prokaryotic gene in hopanoid (triterpenoid) biosynthesis. Squalene hopene cyclase, an integral membrane protein, directly cyclizes squalene into hopanoid products.
Probab=45.40 E-value=1.8e+02 Score=34.73 Aligned_cols=124 Identities=15% Similarity=0.036 Sum_probs=72.0
Q ss_pred ccchHHHHHHHHHHHhhccccCccceeEeecCCCCCCCCCCCCCcccchHHHHHHHHhcC---ChHHHHHHHHHHhhhcc
Q 006131 185 EASNIEKEAWKLLRDAVVNYCGNPVGTVAANNPADKQPLNYDQVFIRDFVPSALAFLLNG---EGDIVKNFLLHTLQLQS 261 (660)
Q Consensus 185 ~~~~~~~~A~~lLr~~~v~~~~~p~GtlAA~~p~~~~~~nY~~vFgRD~vISal~~L~~G---~peiar~~L~tla~lQ~ 261 (660)
..++.++++++.|++.++.-.+. +.+.... .++| |+..+..+++..| +...++..+..+.+.|-
T Consensus 284 ~~~~~~~~~l~~l~~~~~~~~~g--~~~~~~~---------s~vW--DTa~ai~AL~~ag~~~~~p~l~kA~~~L~~~Qi 350 (635)
T TIGR01507 284 QHDAFIKLGWEGIDLYGVELDDS--WMFQACV---------SPVW--DTALAVLALREAGLPADHDALVKAGEWLLDKQI 350 (635)
T ss_pred CCCHHHHHHHHHHHHheEecCCc--eEecCCC---------CcHH--HHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhcc
Confidence 46789999999998876653221 1111111 1566 8888888876555 33456666777765554
Q ss_pred cccccccCCCCCCCCCCcceeeeccCCCCCCCccceecCCCCCCCCC----cccCCCcHHHHHHHHHHHHHHhCcHhHHH
Q 006131 262 WEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIG----RVAPVDSGLWWIILLRAYGKITGDYALQE 337 (660)
Q Consensus 262 ~e~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~Ge~~~~----yygsVDAtLWfIIal~~Y~k~TGD~~f~~ 337 (660)
... +.|+ +.. ....-|.-++. +|-.+|-|..-+.+|..- .+.+
T Consensus 351 ~~~--~~w~-----~~~-------------------~~~~~GGW~f~~~~~~~pd~ddTa~~L~AL~~~--~~~~----- 397 (635)
T TIGR01507 351 TVP--GDWA-----VKR-------------------PNLEPGGWAFQFDNVYYPDVDDTAVVVWALNGL--RLPD----- 397 (635)
T ss_pred cCC--CCcc-----ccC-------------------CCCCCCccCCCCCCCCCCCchhHHHHHHHHHHc--CCCc-----
Confidence 321 1211 000 00112333332 467899999888888663 1222
Q ss_pred hhhhHHHHHHHHHHHHh
Q 006131 338 RVDVQTGIRLILNLCLT 354 (660)
Q Consensus 338 ~~~~q~~I~~IL~w~l~ 354 (660)
++.....|+++++|++.
T Consensus 398 ~~~~~~~i~ra~~wLl~ 414 (635)
T TIGR01507 398 ERRRRDAMTKAFRWIAG 414 (635)
T ss_pred cccchHHHHHHHHHHHH
Confidence 22356788999999986
No 36
>PF07721 TPR_4: Tetratricopeptide repeat; InterPro: IPR011717 This entry includes tetratricopeptide-like repeats not detected by the IPR001440 from INTERPRO, IPR013105 from INTERPRO and IPR011716 from INTERPRO models. The tetratricopeptide repeat (TPR) motif is a protein-protein interaction module found in multiple copies in a number of functionally different proteins that facilitates specific interactions with a partner protein(s) [].; GO: 0042802 identical protein binding
Probab=41.24 E-value=37 Score=23.12 Aligned_cols=25 Identities=20% Similarity=0.353 Sum_probs=21.2
Q ss_pred hhhHHHHHHHHHHcCCcHHHHHHHH
Q 006131 547 PTLLWQFTLACIKMGRPELAQKAVA 571 (660)
Q Consensus 547 P~LLw~~~lA~lK~Gr~~~A~r~L~ 571 (660)
|+....++.++.+.|+.++|++.++
T Consensus 1 ~~a~~~la~~~~~~G~~~eA~~~l~ 25 (26)
T PF07721_consen 1 PRARLALARALLAQGDPDEAERLLR 25 (26)
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHh
Confidence 5667788889889999999998875
No 37
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]
Probab=33.21 E-value=7.5e+02 Score=30.13 Aligned_cols=219 Identities=17% Similarity=0.115 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhCcHhHHHhhhhHHHHHHHHHHHHhCCCCCCCceeecCCCccccccccccCcccchhHHHHHHHHHHH
Q 006131 318 WWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSR 397 (660)
Q Consensus 318 WfIIal~~Y~k~TGD~~f~~~~~~q~~I~~IL~w~l~dgFd~~p~Llv~dGs~w~D~rm~r~G~PlEVQALwY~ALr~aa 397 (660)
+.+.+.-..+..|||..+ ...++.|++|+++ -|..|+|++..--.-...| |-.++|-+...-..
T Consensus 277 ~l~~~y~~ay~~tgd~~y------~~~a~~i~~~l~r-------el~sp~ggFyss~DAD~~g---~EG~~Y~Ws~eEi~ 340 (667)
T COG1331 277 LLLRAYAEAYRATGDDLY------RRAAEGILDYLLR-------ELYSPEGGFYSSLDADSDG---EEGKYYTWSVEELK 340 (667)
T ss_pred HHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHH-------HhcCCCCceeecccccCcc---cCCCeeecCHHHHH
Q ss_pred HHHh---------------------------------hcCCChHHHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhcccc
Q 006131 398 EMLI---------------------------------VNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTE 444 (660)
Q Consensus 398 eL~~---------------------------------~~~g~~~~a~~l~~ra~aL~~~~~~~FWld~k~l~~i~r~~te 444 (660)
+++. . .+..+.++.+++++.+-++
T Consensus 341 ~~Lg~d~~~~~~~f~vs~~GnfeGrnvL~~~~~~~~~~-~~~~~~l~~~r~kL~~~R~---------------------- 397 (667)
T COG1331 341 EVLGEDAELACKYFDVSEEGNFEGRNVLHVPGPLEEAI-EEAEEKLERAREKLLAARE---------------------- 397 (667)
T ss_pred HHhcccHHHHHHHcccCCCCCcCCceeecccCchhhhh-hhhHHHHHHHHHHHHHHHH----------------------
Q ss_pred cchhhhhhhcCCCCCCCcccccccccCCCCceeeccCCCCccccccccchhHHHHhcCCCHHHHHHHHHHHHhhhhhhhc
Q 006131 445 EYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGHMDFRFFTLGNLWAIVSSLGTARQNEGILNLIEAKWDDLVA 524 (660)
Q Consensus 445 ~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g~v~P~~~d~Rf~slGN~LAilsgLl~~eqa~~Il~~I~~~w~dL~t 524 (660)
....|. .|....+-=|.| ++++++...+.-.--+.++.. +-..
T Consensus 398 ---------------------------------~R~~P~-~Ddkvlt~wNgl-mi~aLa~a~~~~~d~~~l~~A--~~~~ 440 (667)
T COG1331 398 ---------------------------------KRKQPS-RDDKVLTDWNGL-MIAALAEAGRVLGDPEYLEAA--ERAA 440 (667)
T ss_pred ---------------------------------hCCCCC-CCcceeeccHHH-HHHHHHHHHHHcCChHHHHHH--HHHH
Q ss_pred CCCccccCCCCCCCcccCCCC--chhh------HHHHHHHHHHcCCc---HHHHHHHHHHHhHhcCCC------------
Q 006131 525 HMPLKICYPALDPWSYHNGGS--WPTL------LWQFTLACIKMGRP---ELAQKAVAMAEKRLSVDQ------------ 581 (660)
Q Consensus 525 ~~gLRtl~Pa~~P~SYHNGgV--WP~L------Lw~~~lA~lK~Gr~---~~A~r~L~~a~~~L~~~~------------ 581 (660)
.+-+..++-.--.+.|-.|.+ +..+ +|.+...+--.+.. +.|.++...+..++.+.+
T Consensus 441 ~fi~~~l~~~rl~~~~~~G~a~~~g~leDYA~~i~gll~lye~t~d~~yL~~A~~L~~~~i~~f~d~~gGf~~t~~~~~~ 520 (667)
T COG1331 441 DFILDNLYVDRLLRRYRGGEAAVAGLLEDYAFLILGLLALYEATGDLAYLEKAIELADEAIADFWDDEGGFYDTPSDSED 520 (667)
T ss_pred HHHHHhhcccchheeeecCcccccccchhHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHhcCCCCCcccCCCcccc
Q ss_pred ----cCccccCCCCCCCCCCCchhhhhhHHHHHHHHHHhcCCC
Q 006131 582 ----WPEYYDTQSGRFIGKQSRLHQTWTIAGYLTSKMLLENPA 620 (660)
Q Consensus 582 ----~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~lL~~P~ 620 (660)
-.|.+||.+. +.-+=.+..++++..+..++.
T Consensus 521 l~ir~~~~~D~a~~--------S~na~~~~~L~~Ls~ltg~~~ 555 (667)
T COG1331 521 LLIRPKEPTDGATP--------SGNAVAAQALLRLSLLTGDAR 555 (667)
T ss_pred cccCCCCCCCCCCC--------CHHHHHHHHHHHHHhhcCchh
No 38
>PRK13807 maltose phosphorylase; Provisional
Probab=32.44 E-value=1.7e+02 Score=35.69 Aligned_cols=78 Identities=15% Similarity=-0.009 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHhCcHhHHHhhhhHHHHHHHHH-HHHhCCCCCCCceeecCCCccccccccccCc------ccchhHHHHH
Q 006131 319 WIILLRAYGKITGDYALQERVDVQTGIRLILN-LCLTDGFDMFPSLLVTDGSCMIDRRMGIHGH------PLEIQSLFYS 391 (660)
Q Consensus 319 fIIal~~Y~k~TGD~~f~~~~~~q~~I~~IL~-w~l~dgFd~~p~Llv~dGs~w~D~rm~r~G~------PlEVQALwY~ 391 (660)
-..++++|+..|||.+|+++. -.+-|..+-. |...-.|+... |..-|+..||-.-| =.++|+..-.
T Consensus 430 Iaya~~~Y~~~TgD~~fl~~~-G~e~l~etArfw~s~~~~~~~~------~~y~I~~V~GPDEY~~~vdNNayTN~ma~~ 502 (756)
T PRK13807 430 IAYAIYNYTNYTGDESYLKEE-GLEVLVEIARFWADRVHFSKRK------NKYMIHGVTGPNEYENNVNNNWYTNYIAAW 502 (756)
T ss_pred HHHHHHHHHHHhCCHHHHHhc-CHHHHHHHHHHHHHheEEeCCC------CeEEECCcccccccCCCCCCchhHHHHHHH
Confidence 357999999999999999752 2333333333 33332232211 22233433333222 2689999999
Q ss_pred HHHHHHHHHhhc
Q 006131 392 ALRCSREMLIVN 403 (660)
Q Consensus 392 ALr~aaeL~~~~ 403 (660)
.|+.|.+++...
T Consensus 503 ~l~~A~~~~~~l 514 (756)
T PRK13807 503 TLEYTLENLDKV 514 (756)
T ss_pred HHHHHHHHHHHh
Confidence 999999988653
No 39
>COG4463 CtsR Transcriptional repressor of class III stress genes [Transcription]
Probab=26.31 E-value=78 Score=31.19 Aligned_cols=78 Identities=18% Similarity=0.291 Sum_probs=54.3
Q ss_pred hhcCCCCCCCcccccccccCCCCceeeccCCCC---------ccccccccchhHHHHhcCCCHHHHHHHHHHHHhhhhhh
Q 006131 452 NKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGH---------MDFRFFTLGNLWAIVSSLGTARQNEGILNLIEAKWDDL 522 (660)
Q Consensus 452 nkFni~p~~ip~wl~~wl~~~ggYL~g~v~P~~---------~d~Rf~slGN~LAilsgLl~~eqa~~Il~~I~~~w~dL 522 (660)
++|...|.||-+-+..-+-++.||++-+.+.++ +...-..+.+++..+-.=++.+.+..|++++... ++
T Consensus 33 d~FqcVPSQINYVIkTRFT~erGY~VESKRGGGGYIRI~Kv~~~~~~~~i~~l~~~I~~~iSq~~~~dII~~Lfde--~l 110 (153)
T COG4463 33 DQFQCVPSQINYVIKTRFTEERGYLVESKRGGGGYIRIIKVEYSDNHELINALLQLIGKSISQQAAEDIIQLLFDE--KL 110 (153)
T ss_pred hhcccchhheeeeeeeeeecccceEEEeecCCCceEEEEEecccchHHHHHHHHHHHhhhhhHHHHHHHHHHHHHh--hh
Confidence 789999999988777766777888886555443 2211223566665555557888999999999876 88
Q ss_pred hcCCCcccc
Q 006131 523 VAHMPLKIC 531 (660)
Q Consensus 523 ~t~~gLRtl 531 (660)
+|..-.+.+
T Consensus 111 iterE~~li 119 (153)
T COG4463 111 ITEREANLI 119 (153)
T ss_pred hhHHHHHHH
Confidence 877665543
No 40
>PF13428 TPR_14: Tetratricopeptide repeat
Probab=26.02 E-value=1.3e+02 Score=22.46 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=25.9
Q ss_pred hhhHHHHHHHHHHcCCcHHHHHHHHHHHhHhcCC
Q 006131 547 PTLLWQFTLACIKMGRPELAQKAVAMAEKRLSVD 580 (660)
Q Consensus 547 P~LLw~~~lA~lK~Gr~~~A~r~L~~a~~~L~~~ 580 (660)
|...-.++.++.+.|+.+.|.+.+..+...-+++
T Consensus 1 p~~~~~la~~~~~~G~~~~A~~~~~~~l~~~P~~ 34 (44)
T PF13428_consen 1 PAAWLALARAYRRLGQPDEAERLLRRALALDPDD 34 (44)
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 3445567788888999999999999887654443
No 41
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [].; PDB: 3K11_A 2GH4_A 2D8L_A 1NC5_A 3PMM_A 2FV1_B 2AHF_A 2FV0_A 2AHG_B 2D5J_A ....
Probab=24.64 E-value=8.7e+02 Score=25.89 Aligned_cols=65 Identities=15% Similarity=0.201 Sum_probs=32.0
Q ss_pred HHHHHHHH-HHcCCc------HHHHHHHHHHHhH-hcCCCcCccccCCCCCCCCC----CCchhhhhhHHHHHHHHH
Q 006131 550 LWQFTLAC-IKMGRP------ELAQKAVAMAEKR-LSVDQWPEYYDTQSGRFIGK----QSRLHQTWTIAGYLTSKM 614 (660)
Q Consensus 550 Lw~~~lA~-lK~Gr~------~~A~r~L~~a~~~-L~~~~~pE~FDG~tg~p~G~----~ac~~QAWSaA~~L~a~~ 614 (660)
+.+++++. ++.|.. +.|++.+..+..+ +..+...-+.++-.+.++|. .......|..+.||.+..
T Consensus 254 ~~a~~l~~gi~~g~~d~~~y~~~a~~a~~~l~~~~~~~dG~~~~~~~~~~~~~~~Y~~~~~~~~~~~G~g~fl~A~~ 330 (336)
T PF07470_consen 254 MFAYGLLRGIRLGLLDPEEYRPAAEKALEALLSNAIDPDGKLGLKGVCGGTPVGGYQGRDYNVNDPYGDGYFLLALA 330 (336)
T ss_dssp HHHHHHHHHHHTTSSTHHHHHHHHHHHHHHHHHCEB-TTSSSBBTCEBETTTS-SHHTEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhCccCCCCCeEEeeeEeecCCCCCCCCCCCCCcCcHHHHHHHHHH
Confidence 45555543 445554 4455666666666 54443211222222334332 222345688888887754
No 42
>TIGR03463 osq_cycl 2,3-oxidosqualene cyclase. This model identifies 2,3-oxidosqualene cyclases from Stigmatella aurantiaca which produces cycloartenol, and Gemmata obscuriglobus and Methylococcus capsulatus which each produce the closely related sterol, lanosterol.
Probab=23.27 E-value=1.1e+03 Score=28.34 Aligned_cols=132 Identities=11% Similarity=-0.050 Sum_probs=70.5
Q ss_pred ccchHHHHHHHHHHHhhccccCccc-eeEeecCCCCCCCCCCCCCcccchHHHHHHHHhcCC-h----HHHHHHHHHHhh
Q 006131 185 EASNIEKEAWKLLRDAVVNYCGNPV-GTVAANNPADKQPLNYDQVFIRDFVPSALAFLLNGE-G----DIVKNFLLHTLQ 258 (660)
Q Consensus 185 ~~~~~~~~A~~lLr~~~v~~~~~p~-GtlAA~~p~~~~~~nY~~vFgRD~vISal~~L~~G~-p----eiar~~L~tla~ 258 (660)
..+++++++++-|++.++.- +. |.-.-+-++ .+| |+.++..++...|. . +..+..+..+.+
T Consensus 273 ~~~p~~~k~l~~l~~~~~~~---~~~g~~~q~~~s--------~~W--DTala~~AL~e~g~~~~~~~~~l~kA~~wL~~ 339 (634)
T TIGR03463 273 PDGPEVAAHLEGLEDYRYED---DDRGLRYNGYNS--------SEW--DTAFAVQALAATPETAGRHRRMLERAARFLEA 339 (634)
T ss_pred CCCHHHHHHHHHHHhhEEEc---CCCCEEEeeCCC--------Cch--hHHHHHHHHHHcCCCchhhhHHHHHHHHHHHH
Confidence 46899999999999975443 55 433222111 235 88899888765552 1 345667777777
Q ss_pred hcccccccccCCC-CCCCCCCcceeeeccCCCCCCCccceecCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHH
Q 006131 259 LQSWEKTVDCYSP-GQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQE 337 (660)
Q Consensus 259 lQ~~e~~ld~~~~-~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~ 337 (660)
.|-.+.. ..+.. -+..-|+-+ .|.... ..|-.+|-|-=-+.++..... .|+.. +
T Consensus 340 ~Q~~~~~-gd~~~~~~~~~~GGW--------------------~f~~~~-~~~pdsD~Ta~~L~Al~~~~~-~~~~~--~ 394 (634)
T TIGR03463 340 NQMLEDT-AEPQRFFRDPAKGGW--------------------CFSDGD-HGWPVSDCTAEALSASLVLEP-LGLNP--E 394 (634)
T ss_pred hcCCcCC-CCchhcCCCCCCCcc--------------------ccccCC-CCCCccccHHHHHHHHHHHhh-cCCcc--c
Confidence 7754431 11110 011112211 111111 145667888766777666532 23210 0
Q ss_pred hhhhHHHHHHHHHHHHh
Q 006131 338 RVDVQTGIRLILNLCLT 354 (660)
Q Consensus 338 ~~~~q~~I~~IL~w~l~ 354 (660)
++.-.+.|+.+++|++.
T Consensus 395 ~~~~~~~l~~av~~Ll~ 411 (634)
T TIGR03463 395 ERVPQARLQDAVEFILS 411 (634)
T ss_pred ccccHHHHHHHHHHHHH
Confidence 10124678888999875
No 43
>PF06051 DUF928: Domain of Unknown Function (DUF928); InterPro: IPR010328 This is a family of uncharacterised bacterial proteins.
Probab=21.50 E-value=1.1e+02 Score=31.04 Aligned_cols=26 Identities=19% Similarity=0.272 Sum_probs=19.2
Q ss_pred hhHHHHHHHHHHHHHHhhcCCChHHH
Q 006131 385 IQSLFYSALRCSREMLIVNDGTKNLV 410 (660)
Q Consensus 385 VQALwY~ALr~aaeL~~~~~g~~~~a 410 (660)
-|++||.||..++++......+....
T Consensus 143 e~GiWyDaL~~La~lr~~~p~d~~l~ 168 (189)
T PF06051_consen 143 ENGIWYDALATLAELRRSQPNDPQLA 168 (189)
T ss_pred HhCchHHHHHHHHHHHHcCCCChHHH
Confidence 37899999999999987543444443
No 44
>cd02892 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. This group contains bacterial SQCY which catalyzes the convertion of squalene to hopene or diplopterol and eukaryotic OSQCY which transforms the 2,3-epoxide of squalene to compounds such as, lanosterol in mammals and fungi or, cycloartenol in plants. Deletion of a single glycine residue of Alicyclobacillus acidocaldarius SQCY alters its substrate specificity into that of eukaryotic OSQCY. Both enzymes have a second minor domain, which forms an alpha-alpha barrel that is inserted into the major domain.
Probab=20.59 E-value=8.2e+02 Score=29.08 Aligned_cols=143 Identities=17% Similarity=0.164 Sum_probs=74.5
Q ss_pred ccchHHHHHHHHHHHhhccccCccceeEeecCCCCCC-C-------CCCCCCcccchHHHHHHHHhcCC---------hH
Q 006131 185 EASNIEKEAWKLLRDAVVNYCGNPVGTVAANNPADKQ-P-------LNYDQVFIRDFVPSALAFLLNGE---------GD 247 (660)
Q Consensus 185 ~~~~~~~~A~~lLr~~~v~~~~~p~GtlAA~~p~~~~-~-------~nY~~vFgRD~vISal~~L~~G~---------pe 247 (660)
+.++.+++|.+.|.+..+ -++.|.-....+.... + ..|..+ =||..++.+++..+. .+
T Consensus 326 ~~~~~l~ka~~wL~~~Q~---~~~~gdw~~~~~~~~~GGW~fs~~~~~~pd~--d~Ta~~l~AL~~~~~~~~~~~~~~~~ 400 (634)
T cd02892 326 EFDPALKKALDWLLESQI---LDNPGDWKVKYRHLRKGGWAFSTANQGYPDS--DDTAEALKALLRLQELPPFGEKVSRE 400 (634)
T ss_pred cchHHHHHHHHHHHHHHc---CCCCCchhhhCCCCCCCCCCCCCCCCCCCCc--CchHHHHHHHHHhhccCCcchhhHHH
Confidence 456788999998888643 1233322111111101 1 122222 288888777655432 26
Q ss_pred HHHHHHHHHhhhcccccccccCCCCCCC--CCCcceeeeccCCCCCCCccceecCCCCCCCCCcccCCCcHHHHHHHHHH
Q 006131 248 IVKNFLLHTLQLQSWEKTVDCYSPGQGL--MPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRA 325 (660)
Q Consensus 248 iar~~L~tla~lQ~~e~~ld~~~~~~Gl--iP~sFKV~h~~~~~~~~~~e~~l~aD~Ge~~~~yygsVDAtLWfIIal~~ 325 (660)
.++..+..++..|...-.+..|....+- +.+ .. ...++|...+ .+.++|.|---+.++..
T Consensus 401 ~i~~Av~wLl~~Qn~dGgf~~y~~~~~~~~~~~-----~~------------p~e~~g~~~~-d~~~~~~Ta~~l~aL~~ 462 (634)
T cd02892 401 RLYDAVDWLLGMQNSNGGFAAFEPDNTYHWLEN-----LN------------PFEDFGDIMI-DPPYVECTGSVLEALGL 462 (634)
T ss_pred HHHHHHHHHHhccCCCCCEeeecCCCchhhHhh-----cC------------chhhhccccc-CCCCcchHHHHHHHHHH
Confidence 6777888888766543322222211110 000 00 0123443222 46788999877777766
Q ss_pred HHHHhCcHhHHHhhhhHHHHHHHHHHHHh
Q 006131 326 YGKITGDYALQERVDVQTGIRLILNLCLT 354 (660)
Q Consensus 326 Y~k~TGD~~f~~~~~~q~~I~~IL~w~l~ 354 (660)
..+...+. . . ++.+.++++++|+.+
T Consensus 463 ~~~~~~~~--r-~-~i~~~i~rAv~~L~~ 487 (634)
T cd02892 463 FGKLYPGH--R-R-EIDPAIRRAVKYLLR 487 (634)
T ss_pred hcccCcch--H-H-HHHHHHHHHHHHHHH
Confidence 53322221 1 1 367889999999987
Done!