Query 006131
Match_columns 660
No_of_seqs 231 out of 382
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 16:48:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006131.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006131hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3c68_A Uncharacterized protein 100.0 3.9E-31 1.3E-35 304.1 33.4 372 185-616 279-757 (761)
2 2z07_A Putative uncharacterize 100.0 1.5E-31 5E-36 284.9 25.8 341 187-612 2-418 (420)
3 2jg0_A Periplasmic trehalase; 100.0 1.2E-30 4.2E-35 289.5 29.4 310 222-616 120-502 (535)
4 3qde_A Cellobiose phosphorylas 100.0 4.8E-30 1.6E-34 296.8 24.0 311 228-608 356-720 (811)
5 3rrs_A Cellobiose phosphorylas 100.0 2E-29 6.8E-34 292.0 23.6 311 228-608 363-733 (822)
6 1v7w_A Chitobiose phosphorylas 100.0 2.3E-29 7.9E-34 288.5 22.3 299 227-573 344-669 (807)
7 2okx_A Rhamnosidase B; alpha b 99.9 1.4E-21 4.7E-26 229.3 30.7 327 185-623 545-885 (956)
8 3cih_A Putative alpha-rhamnosi 99.9 5.2E-21 1.8E-25 218.7 24.6 288 226-623 338-645 (739)
9 1ulv_A Glucodextranase; GH fam 99.8 1.7E-18 5.7E-23 204.9 24.8 350 186-619 282-670 (1020)
10 1lf6_A Glucoamylase; (alpha/al 99.8 4.9E-18 1.7E-22 193.2 25.3 340 185-617 293-667 (684)
11 2fba_A Glucoamylase Glu1; (alp 99.3 2.6E-10 9E-15 125.9 24.7 327 206-617 46-486 (492)
12 1gai_A Glucoamylase-471; hydro 99.3 7.8E-10 2.7E-14 121.7 25.0 313 206-617 31-429 (472)
13 2vn4_A Glucoamylase; hydrolase 99.2 2.9E-09 9.8E-14 120.2 28.0 320 206-617 30-434 (599)
14 2p0v_A Hypothetical protein BT 99.1 9.5E-10 3.2E-14 120.9 18.1 343 201-614 87-466 (489)
15 3qry_B Putative uncharacterize 98.7 3.7E-07 1.3E-11 99.0 19.8 358 186-610 25-416 (426)
16 3p2c_A Putative glycosyl hydro 98.6 8.8E-07 3E-11 97.0 18.1 340 207-613 75-447 (463)
17 3qt9_A Putative uncharacterize 98.6 2.2E-06 7.7E-11 93.0 19.7 356 186-610 28-416 (427)
18 2rdy_A BH0842 protein; PSI-II, 95.9 0.06 2E-06 62.8 13.6 100 316-417 450-557 (803)
19 1h54_A Maltose phosphorylase; 95.0 0.73 2.5E-05 53.4 18.5 79 316-401 429-514 (754)
20 2eab_A Alpha-fucosidase; glyco 94.3 0.44 1.5E-05 56.4 14.7 82 315-403 507-597 (899)
21 1w6k_A Lanosterol synthase; cy 39.8 3.6E+02 0.012 31.1 14.6 131 185-354 353-492 (732)
22 2gz6_A N-acetyl-D-glucosamine 38.6 3.3E+02 0.011 27.6 19.4 20 601-620 305-324 (388)
23 2ooa_A E3 ubiquitin-protein li 34.6 31 0.001 27.4 3.2 28 229-257 23-50 (52)
24 2d9s_A CBL E3 ubiquitin protei 34.3 33 0.0011 27.3 3.4 28 229-257 21-48 (53)
25 1fp3_A N-acyl-D-glucosamine 2- 32.3 4.3E+02 0.015 27.1 16.3 45 546-590 314-363 (402)
26 2gz6_A N-acetyl-D-glucosamine 32.2 4.2E+02 0.014 26.9 18.7 26 313-338 114-139 (388)
27 1nc5_A Hypothetical protein YT 24.9 5.9E+02 0.02 26.3 15.5 17 384-400 41-57 (373)
No 1
>3c68_A Uncharacterized protein YGJK; GH63, processing alpha-glucosidase, alpha/alpha barrel, hydrolase; HET: BMA; 1.50A {Escherichia coli} PDB: 3c67_A* 2ds3_A* 3c69_A* 3d3i_A
Probab=100.00 E-value=3.9e-31 Score=304.06 Aligned_cols=372 Identities=14% Similarity=0.108 Sum_probs=257.0
Q ss_pred ccchHHHHHHHHHHHhhccccCccceeEee-c-CCCCCCCCCCCC--CcccchHHHHHHHHhcCChHHHHHHHHHHhhhc
Q 006131 185 EASNIEKEAWKLLRDAVVNYCGNPVGTVAA-N-NPADKQPLNYDQ--VFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQ 260 (660)
Q Consensus 185 ~~~~~~~~A~~lLr~~~v~~~~~p~GtlAA-~-~p~~~~~~nY~~--vFgRD~vISal~~L~~G~peiar~~L~tla~lQ 260 (660)
+.+.|..+|+..|+... ..+.|.|.+ . -|. +...||.. +|+||+.+.+++++ ..+|+++|+.|+.++.+|
T Consensus 279 ~~~~l~~~a~~tL~~n~----~~~~g~v~~~~v~P~-~g~~wF~~~~~w~wDs~~~a~gL~-~~~~elAr~~L~~l~~~Q 352 (761)
T 3c68_A 279 EQTRVAVKAIETLNGNW----RSPGGAVKFNTVTPS-VTGRWFSGNQTWPWDTWKQAFAMA-HFNPDIAKENIRAVFSWQ 352 (761)
T ss_dssp HHHHHHHHHHHHHHHTE----ECCBTTBCSCEECSC-TTCTTTCTTCBCHHHHHHHHHHHT-TTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhc----cCccCcCCCCeEEec-CCCCCCCcCCeeccHHHHHHHHHH-HcCHHHHHHHHHHHHHhh
Confidence 34567788888877752 233444411 1 121 12348888 99999999999865 569999999999999998
Q ss_pred ccccccccCCC-CCCCCCCcceeeeccCCCCCCCccceecCCC-CCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHh
Q 006131 261 SWEKTVDCYSP-GQGLMPASFKVRTVPLDGGDGTLEEVLDPDF-GESAIGRVAPVDSGLWWIILLRAYGKITGDYALQER 338 (660)
Q Consensus 261 ~~e~~ld~~~~-~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~-Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~ 338 (660)
.++. |.+++ ..|.||+.+ .+.+ .++. |+.+. ++....-.+||++++++|+++|||.+|+++
T Consensus 353 ~~~~--d~~r~~~~G~IP~~~--~~~~------------~p~r~g~~~~-~~~~~sqPPl~~~av~~yy~~tgD~~fL~e 415 (761)
T 3c68_A 353 IQPG--DSVRPQDVGFVPDLI--AWNL------------SPERGGDGGN-WNERNTKPSLAAWSVMEVYNVTQDKTWVAE 415 (761)
T ss_dssp CCTT--CSSCGGGTTCCCSBB--CSSC------------CGGGTSCCSS-CBCSCCCCCCHHHHHHHHHHHHCCHHHHHH
T ss_pred hhcc--cCCccCCCCEeeeee--ccCC------------cccccCcccc-ccCCCCCcHHHHHHHHHHHHHhCCHHHHHH
Confidence 7765 56653 679999843 1210 1122 32222 222223347899999999999999999998
Q ss_pred hhhHHHHHHHHHHHHhCC-CCCCCcee----------ecCC---------------------------------------
Q 006131 339 VDVQTGIRLILNLCLTDG-FDMFPSLL----------VTDG--------------------------------------- 368 (660)
Q Consensus 339 ~~~q~~I~~IL~w~l~dg-Fd~~p~Ll----------v~dG--------------------------------------- 368 (660)
+.+.|+++++|+.... .+....+. .|+|
T Consensus 416 --~~P~L~~~~~w~~~~rd~d~~GL~~y~~~~~~~~~~prge~~~~d~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~ 493 (761)
T 3c68_A 416 --MYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLFTVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQV 493 (761)
T ss_dssp --HHHHHHHHHHHHHHHSCTTCSSCCCCEEECCTTTBCTTSCBEEEEEETTEEEEEECHHHHHHHHHHTCSSEEECHHHH
T ss_pred --HHHHHHHHHHHHHhCCCCCcCccEEecccccccccCCCcchhccccccccchhcccccccchhccccccccchhhhhh
Confidence 5999999999997621 22111111 0001
Q ss_pred ----Cccccc---------------------------c----ccccCc---------ccchhHHHHHHHHHHHHHHhhcC
Q 006131 369 ----SCMIDR---------------------------R----MGIHGH---------PLEIQSLFYSALRCSREMLIVND 404 (660)
Q Consensus 369 ----s~w~D~---------------------------r----m~r~G~---------PlEVQALwY~ALr~aaeL~~~~~ 404 (660)
..+||- . .+..|. +|++||+||.|++.+++|++..
T Consensus 494 ~a~weSG~D~s~rw~~~~~~~~~~y~~~~~~~~~w~~~~~~n~~~~G~l~~~~~~~~~VdlnA~ly~al~~lA~lA~~L- 572 (761)
T 3c68_A 494 AASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATIL- 572 (761)
T ss_dssp HHHHHHTCTTCGGGTCCCHHHHHHHHHTTCCGGGGCCCEEEEECTTCCEEEEEESEECHHHHHHHHHHHHHHHHHHHHT-
T ss_pred hccccCCCCcchhccccccccccccccccccccchhhhhccccccccccccCcccccCHHHHHHHHHHHHHHHHHHHHh-
Confidence 012221 0 022243 7899999999999999999885
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceeeccCCCC
Q 006131 405 GTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGH 484 (660)
Q Consensus 405 g~~~~a~~l~~ra~aL~~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g~v~P~~ 484 (660)
|+.+.++++.+++..+++.|+++||.+.++++.-+.+.++..+ ....|..
T Consensus 573 G~~e~A~~y~~~A~~lk~ai~~~fWd~e~G~y~D~~~~~~~~~----------------------~~~~g~~-------- 622 (761)
T 3c68_A 573 GKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLA----------------------NGCAGKP-------- 622 (761)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTEETTTTEECCEECCSSCCT----------------------TSCSSCB--------
T ss_pred CChHHHHHHHHHHHHHHHHHHHhCcCccCCEEEEEecCCCccc----------------------cccccce--------
Confidence 6677888999999999999999999765543211101100000 0000001
Q ss_pred ccccccccchhHHHHhcCCCHHHHHHHHHHHHhhhhhhhcCCCccccCCC---CCCCcccCCCCchhhHHHHHHHHHHcC
Q 006131 485 MDFRFFTLGNLWAIVSSLGTARQNEGILNLIEAKWDDLVAHMPLKICYPA---LDPWSYHNGGSWPTLLWQFTLACIKMG 561 (660)
Q Consensus 485 ~d~Rf~slGN~LAilsgLl~~eqa~~Il~~I~~~w~dL~t~~gLRtl~Pa---~~P~SYHNGgVWP~LLw~~~lA~lK~G 561 (660)
...+.+..++++++++++++++|++++++.|... +.|.+++|||+++|. +.|.+||||++||...|+++.|+.++|
T Consensus 623 ~sn~~~~~s~~~pL~~Gl~~~e~a~~vl~~L~~~-~~l~t~~Girtls~~~p~y~p~~yw~GpvW~~~~~lli~aL~~~G 701 (761)
T 3c68_A 623 IVERGKGPEGWSPLFNGAATQANADAVVKVMLDP-KEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGMERYG 701 (761)
T ss_dssp CGGGCCCGGGGHHHHTTCSCHHHHHHHHHHHTCT-TTTCCSSCSCSSCTTCTTCCTTCTTTTCEEHHHHHHHHHHHHHTT
T ss_pred eecchhhHHHHHHHHcCCCCHHHHHHHHHHHhCh-hhhcCCCCccccCCCCcccCCCccccCCcccchHHHHHHHHHHcC
Confidence 0112245778999999999999999999999752 257899999998865 459999999999988898899999999
Q ss_pred CcHHHHHHHHHHHhH----hcCCCcCccccCCCCCCCCCCCchhhhhhHHHHHHHHHHh
Q 006131 562 RPELAQKAVAMAEKR----LSVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYLTSKMLL 616 (660)
Q Consensus 562 r~~~A~r~L~~a~~~----L~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~lL 616 (660)
+.++|.+++...... ...+.++|.||+.+|.+. +|.+|+||+|.+|.+....
T Consensus 702 ~~d~A~~l~~~~~~~~~~~~~~G~~~E~yd~~tg~p~---G~~~fgWSaa~~l~ll~~y 757 (761)
T 3c68_A 702 YRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQ---GAPNFSWSAAHLYMLYNDF 757 (761)
T ss_dssp CHHHHHHHHHHHHHHSTTTTSSSCCCSEECTTTCCEE---SCSSCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHhhCCceeeEecCCCCCcC---cCCCchHHHHHHHHHHHHH
Confidence 999999988865432 245799999999998766 4569999999987665543
No 2
>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1.5e-31 Score=284.86 Aligned_cols=341 Identities=14% Similarity=0.107 Sum_probs=243.1
Q ss_pred chHHHHHHHHHHHhhccccCccceeEeecCCCCCCCCCCCCCcccchHHHHHHHHhcCChHHHHHHHHHHhhhccccccc
Q 006131 187 SNIEKEAWKLLRDAVVNYCGNPVGTVAANNPADKQPLNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTV 266 (660)
Q Consensus 187 ~~~~~~A~~lLr~~~v~~~~~p~GtlAA~~p~~~~~~nY~~vFgRD~vISal~~L~~G~peiar~~L~tla~lQ~~e~~l 266 (660)
+.|.++|++.|+.. .+..+++.+ . -+|..+|+||+.+.+++++.. +++.++..|..++.
T Consensus 2 ~~l~~~a~~~l~~n-----~~~~~~vP~-~------~~f~~~~~wDs~~~~~gl~~~-~~~~a~~~l~~~~~-------- 60 (420)
T 2z07_A 2 APLRTKAVEVLQRN-----SRGAFTVPA-H------GLYPYQWLWDSAFIALGWTQV-DWERAWQELLCLFD-------- 60 (420)
T ss_dssp -CHHHHHHHHHHHH-----BCSSCBCSS-T------TCCSCEEHHHHHHHHHHHTTT-CHHHHHHHHHHHHH--------
T ss_pred hHHHHHHHHHHHHc-----CCCCCcCCC-C------CCCCCccHHHHHHHHHHHHhc-CHHHHHHHHHHHHH--------
Confidence 35789999999984 333222222 1 289999999999999997654 78888888877763
Q ss_pred ccCCCCCCCCCCcceeeeccCCCCCCCccceecCCC-C-CCCCC-cccCCCcHHHHHHHHHHHHHHhCc----HhHHHhh
Q 006131 267 DCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDF-G-ESAIG-RVAPVDSGLWWIILLRAYGKITGD----YALQERV 339 (660)
Q Consensus 267 d~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~-G-e~~~~-yygsVDAtLWfIIal~~Y~k~TGD----~~f~~~~ 339 (660)
..|...|+||+ .|.+...+. -+-.++. | +.+.+ ++.++|.++++++++++|++.||| .+|+++
T Consensus 61 -~~q~~~G~ip~--~v~~~~~~~------y~p~~~~w~~~~~~~~~~~~~~qpP~~~~~~~~~~~~tgD~~~~~~~L~~- 130 (420)
T 2z07_A 61 -YGQGPDGMLPH--IVFHEQSRD------YFPGPDVWGREARAQPATSGITQPPVVATVVRYLYEKDPDRDRARERARY- 130 (420)
T ss_dssp -HHCCTTCCCCS--EEECCSCCC------CC-----------CCCEECSSCCCCCHHHHHHHHHHHCSCHHHHHHHHHH-
T ss_pred -HHHhhCCCcce--ecccCCCcc------cCcchhhhcccccccCCCCCCcCCcHHHHHHHHHHHhCccchhHHHHHHH-
Confidence 12357799998 333321110 0000111 1 12222 567899999999999999999999 999987
Q ss_pred hhHHHHHHHHHHHHhCC-CCCCCceee----cCCC----cccccc----cc-----------------------------
Q 006131 340 DVQTGIRLILNLCLTDG-FDMFPSLLV----TDGS----CMIDRR----MG----------------------------- 377 (660)
Q Consensus 340 ~~q~~I~~IL~w~l~dg-Fd~~p~Llv----~dGs----~w~D~r----m~----------------------------- 377 (660)
+.+.|++.++|..... .+....+.. ++|. .|.|.. .+
T Consensus 131 -~~p~l~~~~~~~~~~~d~~~~Gl~~~~~~we~G~~~~~~w~~~~~~~~~~~~~~y~r~d~~~~~~~~~p~~~~~~~~~~ 209 (420)
T 2z07_A 131 -LFPKLLAFHRWLYHARDPYRTGLVVIVHPWESGMDNSPAWDKPLSRVPVENLPPYERRDVKHVNPEERPRKEDYDRYLS 209 (420)
T ss_dssp -HHHHHHHHHHHHHHHHCTTCCSCCCBSSGGGGTCTTCGGGHHHHHTCCC-----------CCSCC-------CHHHHHH
T ss_pred -HHHHHHHHHHHHhcCCCCCCCCceeeecCCCcCCCCCccccccccccCCCCcchhhhhhhhccccccCCcHHHHHHHHH
Confidence 5899999999986521 121111111 1232 565531 01
Q ss_pred --------------------ccCcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhhhhcchhhhhH
Q 006131 378 --------------------IHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINE 437 (660)
Q Consensus 378 --------------------r~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ra~aL~~~~~~~FWld~k~l~~ 437 (660)
..+.+|++||++|.|++.+++|++..+.+ +++..+++..+++.|++ ||.+.+++
T Consensus 210 ~~~~~~esG~d~s~l~~~~~~~~~~vdlna~~~~~~~~la~la~~lg~~---a~~~~~~a~~~~~ai~~-~Wd~~~g~-- 283 (420)
T 2z07_A 210 LLYLFRRLEYDPREIYRQSPFKVVDVGFNAILQRANRDLYALAVLLQED---PYEIEEWIVRGEVGLEA-LWDREAGF-- 283 (420)
T ss_dssp HHHHHHHTTTCHHHHHHHCSCCEECHHHHHHHHHHHHHHHHHHHHTTCC---CHHHHHHHHHHHHHHHH-TEETTTTE--
T ss_pred HHHHHHHcCCChhhhcccCCcccCChhHHHHHHHHHHHHHHHHHHhCcc---HHHHHHHHHHHHHHHHH-hhCcccCe--
Confidence 11347889999999999999999986543 67778888888999999 99654332
Q ss_pred hhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceeecc-CCC-CccccccccchhHHHHhcCCCHHHHHHHHHHH
Q 006131 438 IYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNL-EPG-HMDFRFFTLGNLWAIVSSLGTARQNEGILNLI 515 (660)
Q Consensus 438 i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g~v-~P~-~~d~Rf~slGN~LAilsgLl~~eqa~~Il~~I 515 (660)
+++.. ..+ ..+ .....+.+++++++++++|+++|++.+
T Consensus 284 --------------------------------------~~d~~~~~g~~~~--~~~~~~~~pL~~g~~~~~~a~~v~~~l 323 (420)
T 2z07_A 284 --------------------------------------YFSWDLVAGEPIA--VKTSAGFLPLFAGTPHQGRASLLAQEA 323 (420)
T ss_dssp --------------------------------------ECCEETTTTEECC--CCBGGGGTHHHHTCSCHHHHHHHHHHH
T ss_pred --------------------------------------eEeeeCCCCCeec--cccHHhHHHHHcCCCCHHHHHHHHHHH
Confidence 22111 111 111 135667888999999999999999999
Q ss_pred Hhhhhhhh--cCCCccccCCC---CCCCcccCCCCchhhHHHHHHHHHHcCCcHHHHHHHHHHHhHhcCCCcCccccCCC
Q 006131 516 EAKWDDLV--AHMPLKICYPA---LDPWSYHNGGSWPTLLWQFTLACIKMGRPELAQKAVAMAEKRLSVDQWPEYYDTQS 590 (660)
Q Consensus 516 ~~~w~dL~--t~~gLRtl~Pa---~~P~SYHNGgVWP~LLw~~~lA~lK~Gr~~~A~r~L~~a~~~L~~~~~pE~FDG~t 590 (660)
. +++ +++||+|++|. ++|.+||+|++||++.|+++.|+.++|..++|.+++......+..+.+.|.||+.+
T Consensus 324 ~----~~~~~~~~gi~t~~~~~~~y~~~~yw~gpvW~~~~~~~~~gL~~~G~~~~A~~l~~~~~~~~~~~~~~E~yd~~~ 399 (420)
T 2z07_A 324 E----RWGEKARYLLPSVDPTSPFFEPGRYWRGPVWINVNWMVAEGFRDYGFAALAARLKADALALMEREGFREYYDPLT 399 (420)
T ss_dssp H----HHTTTCSSSCBSBCTTSTTCCTTSTTSSCBCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCSEEEECTTT
T ss_pred H----HHhccCCCCcCcCCCcCcccCCcCCCCCCcchhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcCCeeeeeCCCC
Confidence 5 577 99999998864 56999999999999999999999999999999988887655555678999999999
Q ss_pred CCCCCCCCchhhhhhHHHHHHH
Q 006131 591 GRFIGKQSRLHQTWTIAGYLTS 612 (660)
Q Consensus 591 g~p~G~~ac~~QAWSaA~~L~a 612 (660)
|.+. +|.+|+||+|.+|.+
T Consensus 400 g~~~---g~~~fgWs~~~~l~l 418 (420)
T 2z07_A 400 GQGR---GGEGFSWSAALALFW 418 (420)
T ss_dssp CCEE---EEESCHHHHHHHHHH
T ss_pred CCcC---CCCCCchHHHHHHHH
Confidence 8655 566999999998764
No 3
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*
Probab=99.98 E-value=1.2e-30 Score=289.49 Aligned_cols=310 Identities=14% Similarity=0.160 Sum_probs=233.5
Q ss_pred CCCCCCCcccchHHHHHHHHhcCChHHHHHHHHHHhhhcccccccccCCCCCCCCCCcceeeeccCCCCCCCccceecCC
Q 006131 222 PLNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPD 301 (660)
Q Consensus 222 ~~nY~~vFgRD~vISal~~L~~G~peiar~~L~tla~lQ~~e~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD 301 (660)
+-+|..+|+||+.+++++++..|.++++|++|..++.+|. ..|.||+.
T Consensus 120 Gg~F~~~~~WDs~f~~~gLl~~~~~~~A~~~l~~~~~~~~----------~~G~IPng---------------------- 167 (535)
T 2jg0_A 120 GGRFREVYYWDSYFTMLGLAESGHWDKVADMVANFAHEID----------TYGHIPNG---------------------- 167 (535)
T ss_dssp BTTBCSCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH----------HHSSCCSB----------------------
T ss_pred CccccccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhc----------cCCcccCC----------------------
Confidence 4599999999999999999999999999999999997662 35889971
Q ss_pred CCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhhhHHHHHHHHHHHHhCCCCCCCc-----ee-ecCC-------
Q 006131 302 FGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLTDGFDMFPS-----LL-VTDG------- 368 (660)
Q Consensus 302 ~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~~q~~I~~IL~w~l~dgFd~~p~-----Ll-v~dG------- 368 (660)
+ ..||.+++.++.|++++++|+++|+| +|+++ +.+.|++.++|.....-...++ +. .++|
T Consensus 168 -~---r~yY~~~sqPPl~~~~v~~~~~~~~~-~fL~~--~~p~L~~~~~ww~~~~~~~~~g~~~~~~~~~~~G~~l~~y~ 240 (535)
T 2jg0_A 168 -N---RSYYLSRSQPPFFALMVELLAQHEGD-AALKQ--YLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDGTLLNRYW 240 (535)
T ss_dssp -S---BGGGTTCCCSCCHHHHHHHHHHHHTH-HHHHH--HHHHHHHHHHHHTTTCTTCCTTEEETTEEECTTSCEEECCC
T ss_pred -C---CccCCCCCCccHHHHHHHHHHHcCCH-HHHHH--HHHHHHHHHHHHHhCCcccCccccccceeecCCCCcceeec
Confidence 1 13788898888899999999999986 89987 6999999999965522100000 00 0111
Q ss_pred ---------------------------Ccccccc---------cccc----C----------cccchhHHHHHHHHHHHH
Q 006131 369 ---------------------------SCMIDRR---------MGIH----G----------HPLEIQSLFYSALRCSRE 398 (660)
Q Consensus 369 ---------------------------s~w~D~r---------m~r~----G----------~PlEVQALwY~ALr~aae 398 (660)
.+|+|.+ .+|. | .|||+|||+|+|++.+++
T Consensus 241 ~~~~~prpesyr~d~~~~~~~~~~~~~~~y~~~~~~~eSGwD~s~R~~~~~~~l~~~~t~~i~~VDlnA~ly~a~~~la~ 320 (535)
T 2jg0_A 241 DDRDTPRPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVPVDLNSLMFKMEKILAR 320 (535)
T ss_dssp CSCCSCCGGGHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTCCSCGGGBSSTTCGGGBCGGGEECHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCcceeehhhhhhccccchhHHHHHHHHHHHhCCCCCccccCCCCCcccccCCccchhhHHHHHHHHHHHHHHH
Confidence 0122100 1332 2 579999999999999999
Q ss_pred HHhhcCCChHHHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceee
Q 006131 399 MLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIG 478 (660)
Q Consensus 399 L~~~~~g~~~~a~~l~~ra~aL~~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g 478 (660)
|++.. |+.+.+.++.+++..+++.|+++||.+.++ ++++
T Consensus 321 lA~~l-G~~~~a~~~~~~A~~lk~ai~~~fWdee~G----------------------------------------~y~D 359 (535)
T 2jg0_A 321 ASKAA-GDNAMANQYETLANARQKGIEKYLWNDQQG----------------------------------------WYAD 359 (535)
T ss_dssp HHHHH-TCHHHHHHHHHHHHHHHHHHHHHSEETTTT----------------------------------------EECC
T ss_pred HHHHh-CChHHHHHHHHHHHHHHHHHHHhCcCCCCC----------------------------------------EEEE
Confidence 99885 567778899999999999999999965443 3322
Q ss_pred ccCCCCccccccccchhHHHHhcCCCHHHHHHHHHHHHhhhhhhhcCCCccccCCCCCCCcccCCC-CchhhHHHHHHHH
Q 006131 479 NLEPGHMDFRFFTLGNLWAIVSSLGTARQNEGILNLIEAKWDDLVAHMPLKICYPALDPWSYHNGG-SWPTLLWQFTLAC 557 (660)
Q Consensus 479 ~v~P~~~d~Rf~slGN~LAilsgLl~~eqa~~Il~~I~~~w~dL~t~~gLRtl~Pa~~P~SYHNGg-VWP~LLw~~~lA~ 557 (660)
..-..+...+..+..+.+.+++|+++++|+++|++.+.+ +|++++|||++++ ++.+||+|+ +||++.|+++.|+
T Consensus 360 ~~~~~~~~~~~~~~s~~~PL~~gi~~~e~a~~v~~~l~~---~l~t~~GlrT~s~--~s~~yW~GpNvW~~~~~l~i~gL 434 (535)
T 2jg0_A 360 YDLKSHKVRNQLTAAALFPLYVNAAAKDRANKMATATKT---HLLQPGGLNTTSV--KSGQQWDAPNGWAPLQWVATEGL 434 (535)
T ss_dssp EETTTTEECCCCBGGGGHHHHTTCSCHHHHHHHHHHHHH---HTEETTEECSBSC--CCSSSSSTTEECHHHHHHHHHHH
T ss_pred EeCCCCCEeeeehhhhHHHHhcCCCCHHHHHHHHHHHHH---HhccCCCCCCCcC--CCccccCCCCcchhHHHHHHHHH
Confidence 111111111235677888899999999999999999975 8999999999984 578999999 9999999999999
Q ss_pred HHcCCcHHHHHHHHHHHhHh-----cCCCcCccccCCCCCCCCC----CCchhhhhhHHHHHHHHHHh
Q 006131 558 IKMGRPELAQKAVAMAEKRL-----SVDQWPEYYDTQSGRFIGK----QSRLHQTWTIAGYLTSKMLL 616 (660)
Q Consensus 558 lK~Gr~~~A~r~L~~a~~~L-----~~~~~pE~FDG~tg~p~G~----~ac~~QAWSaA~~L~a~~lL 616 (660)
.++|..++|.++.......+ ..+.++|+|||.+|.+.|. +...+|+||+|.+|.+....
T Consensus 435 ~~yG~~~~A~~la~~~l~~~~~~~~~~G~l~E~yd~~~~~~~G~ggeY~~~~~fgWT~av~l~ll~~y 502 (535)
T 2jg0_A 435 QNYGQKEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLDLI 502 (535)
T ss_dssp HTTTCHHHHHHHHHHHHHHHHHHHHHHSSCBSCEETTSSSCBCCCSSSCCCBSCHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHHHHhccCCeeeeeECCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHh
Confidence 99999999977765443222 3489999999998755543 12369999999988555544
No 4
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}
Probab=99.97 E-value=4.8e-30 Score=296.75 Aligned_cols=311 Identities=17% Similarity=0.176 Sum_probs=230.2
Q ss_pred Ccc-cchHHHHHHHHhcCChHHHHHHHHHHhhhcccccccccCCCCCCCCCCcceeeeccCCCCCCCccceecCCCCCCC
Q 006131 228 VFI-RDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESA 306 (660)
Q Consensus 228 vFg-RD~vISal~~L~~G~peiar~~L~tla~lQ~~e~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~Ge~~ 306 (660)
-|| ||.+.-+++++. ..||++|..|+.++. .|-.+|.+|+.|. |..+ .|...
T Consensus 356 ~~G~RD~~qd~~~~~~-~~p~~~r~~il~~~~----------~Q~~dG~~~h~~~----p~~~------------~g~~~ 408 (811)
T 3qde_A 356 GMGFRDSNQDLLGFVH-QIPERARERLLDLAA----------TQLEDGSAYHQYQ----PLTK------------KGNNE 408 (811)
T ss_dssp CEEHHHHHHHHHTTTT-TCHHHHHHHHHHHHT----------TBCTTSCBCSEEC----TTTC------------CEECT
T ss_pred CCccHHHHHHHHHHHh-cCHHHHHHHHHHHHh----------hcccCCCccceec----CCCC------------CCCCC
Confidence 466 999999999765 479999999999984 3446688998551 1000 01111
Q ss_pred CCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhh-----------hhHHHHHHHHHHHHhCCCCCCCceeecCCCcccccc
Q 006131 307 IGRVAPVDSGLWWIILLRAYGKITGDYALQERV-----------DVQTGIRLILNLCLTDGFDMFPSLLVTDGSCMIDRR 375 (660)
Q Consensus 307 ~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~-----------~~q~~I~~IL~w~l~dgFd~~p~Llv~dGs~w~D~r 375 (660)
++ +..+|.+||+++++++|++.|||.+|+++. .+.+.++++++++... ++.+. |......+|+|.-
T Consensus 409 ~~-~~~~D~~lW~i~av~~Y~~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~-~g~~G-L~~~g~~DWnD~l 485 (811)
T 3qde_A 409 IG-SNFNDDPLWLILATAAYIKETGDYSILKEQVPFNNDPSKADTMFEHLTRSFYHVVNN-LGPHG-LPLIGRADWNDCL 485 (811)
T ss_dssp TC-CCBTTHHHHHHHHHHHHHHHHCCGGGGGSEEEETTEEEEEEEHHHHHHHHHHHHHTC-BCTTS-SBBCBTCSSSTTC
T ss_pred CC-CCcccchhHHHHHHHHHHHHHCCHHHHHhhhhhhcCCcccccHHHHHHHHHHHHHhc-CCCCC-CcccccCCchhhc
Confidence 11 356999999999999999999999999752 3577889999998742 23433 3333346888842
Q ss_pred --------c-----------cccCcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhhhhcchhhhh
Q 006131 376 --------M-----------GIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKIN 436 (660)
Q Consensus 376 --------m-----------~r~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ra~aL~~~~~~~FWld~k~l~ 436 (660)
+ ++.|.+|++++|||.||+.+++|++.. |+.+.++++.++++.|++.|+++||- .+.
T Consensus 486 n~~~~~~~vg~~~~~vtp~~~~~gesv~~~al~y~AL~~~a~lA~~l-Gd~~~A~~~~~~A~~lk~a~~~~~Wd-g~~-- 561 (811)
T 3qde_A 486 NLNCFSTVPDESFQTTTSKDGKVAESVMIAGMFVFIGKDYVKLCEYM-GLEEEARKAQQHIDAMKEAILKYGYD-GEW-- 561 (811)
T ss_dssp CSSCCCCCTTSCTTTSCCCCCSSCEEHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHHHSBC-SSS--
T ss_pred cccccccccCccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHHHHhccC-cCe--
Confidence 1 257899999999999999999999885 66788999999999999999999993 221
Q ss_pred HhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceee--ccCCCCccccccccchhHHHHhcCCCHH-HHHHHHH
Q 006131 437 EIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIG--NLEPGHMDFRFFTLGNLWAIVSSLGTAR-QNEGILN 513 (660)
Q Consensus 437 ~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g--~v~P~~~d~Rf~slGN~LAilsgLl~~e-qa~~Il~ 513 (660)
....+..+| -.++ ..++++ .++.++.+++++|+++++ |++++|+
T Consensus 562 ----------------------------y~ra~~~dg-~~~gs~~~~~~q----i~~~~q~~avlsGia~~e~ra~~~m~ 608 (811)
T 3qde_A 562 ----------------------------FLRAYDDFG-RKVGSKENEEGK----IFIESQGFCVMAEIGLEDGKALKALD 608 (811)
T ss_dssp ----------------------------BCCEECTTS-CEESSTTSSSCC----EESHHHHHHHHTTCSSSSSHHHHHHH
T ss_pred ----------------------------EEEEEcCCC-CCCCccCCCCce----EEecchhHHHHhCCCCchHHHHHHHH
Confidence 111111122 1112 123444 467888899999999999 9999999
Q ss_pred HHHhhhhhhhcCCCccccCCCCC-------------CCcccCCCCchhhHHHHHHHHHHcCCcHHHHHHHHHHHhHh---
Q 006131 514 LIEAKWDDLVAHMPLKICYPALD-------------PWSYHNGGSWPTLLWQFTLACIKMGRPELAQKAVAMAEKRL--- 577 (660)
Q Consensus 514 ~I~~~w~dL~t~~gLRtl~Pa~~-------------P~SYHNGgVWP~LLw~~~lA~lK~Gr~~~A~r~L~~a~~~L--- 577 (660)
.|.+ +|++++|||+++|++. |.+||||++|||.....++|+.|+|+.++|.+++..+...-
T Consensus 609 ~v~~---~L~t~~Glrll~p~f~~~~~d~g~~~~Y~pg~~enG~iy~H~~~w~~~a~a~~G~~~~A~~~~~~l~p~~~~~ 685 (811)
T 3qde_A 609 SVKK---YLDTPYGLVLQNPAFTRYYIEYGEISTYPPGYKENAGIFCHNNAWIICAETVVGRGDMAFDYYRKIAPAYIED 685 (811)
T ss_dssp HHHH---HHCCTTCCCSEESCCCSCCTTTGGGGTSCTTSTTTTCEEHHHHHHHHHHHHHTTCHHHHHHHHHHHCGGGSGG
T ss_pred HHHH---HhCCCcceEeecCCccccCCCCCceeccCCCccccccccchHHHHHHHHHHHcCCHHHHHHHHHHhChhhhcc
Confidence 9976 7999999999998732 89999999999995445566669999999999998763211
Q ss_pred ---cCCCcCccccCCC-CCCCCCCCchhhhhhHHH
Q 006131 578 ---SVDQWPEYYDTQS-GRFIGKQSRLHQTWTIAG 608 (660)
Q Consensus 578 ---~~~~~pE~FDG~t-g~p~G~~ac~~QAWSaA~ 608 (660)
...+.||+|+|.. +......+|.+|+|..|+
T Consensus 686 ~~~~~~~~Py~~~~~~~~~~~p~~Gr~~~~w~tGs 720 (811)
T 3qde_A 686 VSDIHKLEPYVYAQMVAGKDAKRHGEAKNSWLTGT 720 (811)
T ss_dssp GHHHHCSCTTSCEEEECCTTSTTTTCEEEESCSTH
T ss_pred hhhhcCcCcEEeccccccccCCCCCCCcchhHHHH
Confidence 2358999999887 211223577799997665
No 5
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*
Probab=99.97 E-value=2e-29 Score=292.04 Aligned_cols=311 Identities=17% Similarity=0.164 Sum_probs=229.4
Q ss_pred Ccc-cchHHHHHHHHhcCChHHHHHHHHHHhhhcccccccccCCCCCCCCCCcceeeeccCCCCCCCccceecCCCCCCC
Q 006131 228 VFI-RDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESA 306 (660)
Q Consensus 228 vFg-RD~vISal~~L~~G~peiar~~L~tla~lQ~~e~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~Ge~~ 306 (660)
-|| ||.+.-+++++. .+||++|..|+.++. .|-.+|.+|+.|. |..+ .|...
T Consensus 363 ~~G~RD~~qd~~~~~~-~~pe~ar~~il~~~~----------~Q~~dG~v~h~~~----p~~~------------~g~~~ 415 (822)
T 3rrs_A 363 GMGFRDSNQDLLGFVH-LIPERARERIIDIAS----------TQFADGSAYHQYQ----PLTK------------RGNND 415 (822)
T ss_dssp CEEHHHHHHHHHHHTT-TCHHHHHHHHHHHHT----------TCCTTSCCCSEEE----TTTT------------EECTT
T ss_pred CCchHHHHHHHHHHHh-cCHHHHHHHHHHHHH----------hhcccCcccceec----CcCC------------CCccC
Confidence 466 999999999865 489999999999984 4456799998552 1000 02111
Q ss_pred CCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhh-----------hhHHHHHHHHHHHHhCCCCCCCceeecCCCcccccc
Q 006131 307 IGRVAPVDSGLWWIILLRAYGKITGDYALQERV-----------DVQTGIRLILNLCLTDGFDMFPSLLVTDGSCMIDRR 375 (660)
Q Consensus 307 ~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~-----------~~q~~I~~IL~w~l~dgFd~~p~Llv~dGs~w~D~r 375 (660)
++ ...+|.+||+++++++|++.|||.+|+++. .+...++++++++... ++.+ +|......+|+|..
T Consensus 416 ~~-~~~~D~~lWl~~av~~Yi~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~-~g~~-GLp~~g~gDWnD~l 492 (822)
T 3rrs_A 416 IG-SGFNDDPLWLIAGTAAYIKETGDFSILDEPVPFDNEPGSEVPLFEHLTRSFEFTVTH-RGPH-GLPLIGRADWNDCL 492 (822)
T ss_dssp TC-SCBTTHHHHHHHHHHHHHHHHCCGGGGGSEECSTTCTTCCEEHHHHHHHHHHHHHHS-BCTT-SSBBCBTCSSSTTC
T ss_pred CC-CcccchHhHHHHHHHHHHHHHCCHHHHHhhhhhhccccccccHHHHHHHHHHHHHhc-CCCC-CCcccCCCcchhhc
Confidence 11 346999999999999999999999999752 3567889999998752 2333 33333345888742
Q ss_pred --------c-----------cccCcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhhhhcchhhhh
Q 006131 376 --------M-----------GIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKIN 436 (660)
Q Consensus 376 --------m-----------~r~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ra~aL~~~~~~~FWld~k~l~ 436 (660)
+ ++.|.+|++++|||.||+.+++|++.. |+.+.++++.++++.|++.|+++|| |.+.
T Consensus 493 n~~~~~~~vg~~~~~~~p~~~~~Gesv~~~al~y~AL~~~a~lA~~~-G~~~~A~~~~~~A~~lk~a~~~~~W-dg~~-- 568 (822)
T 3rrs_A 493 NLNCFSTTPGESFQTTENQAGGVAESTFIAAQFVLYGEQYAELAARR-GLADVADRARGHVAEMRDALLTDGW-DGSW-- 568 (822)
T ss_dssp CTTCCCCSTTCCTTTCCSSCCCCCEEHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHTTTB-CSSS--
T ss_pred ccccccccccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHHHHHhcc-Ccce--
Confidence 1 267899999999999999999999884 6778899999999999999999999 2221
Q ss_pred HhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceee--ccCCCCccccccccchhHHHHhcCCCHH-------H
Q 006131 437 EIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIG--NLEPGHMDFRFFTLGNLWAIVSSLGTAR-------Q 507 (660)
Q Consensus 437 ~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g--~v~P~~~d~Rf~slGN~LAilsgLl~~e-------q 507 (660)
....+..+|. -+| ..++++ .++.++.+++++|+++++ |
T Consensus 569 ----------------------------y~ra~d~dg~-~~gs~~~~~~~----i~~~~q~~avlsGia~~e~~~~~~~~ 615 (822)
T 3rrs_A 569 ----------------------------FLRAYDYYGN-PIGTDAHDEGK----IWIEPQGFAVMAGVGVGEGPQDTDAP 615 (822)
T ss_dssp ----------------------------BCCEECTTSC-EESCTTSSSCC----EEHHHHHHHHHTTTTCCSSTTCTTSH
T ss_pred ----------------------------eEEEEcCCCC-CccccCCCCce----EEeccchhHhhcCCCCcccccchHHH
Confidence 1111111221 112 123444 467788889999999999 9
Q ss_pred HHHHHHHHHhhhhhhhcCCCccccCCCC-------------CCCcccCCCCchhhHHHHHHHHHHcCCcHHHHHHHHHHH
Q 006131 508 NEGILNLIEAKWDDLVAHMPLKICYPAL-------------DPWSYHNGGSWPTLLWQFTLACIKMGRPELAQKAVAMAE 574 (660)
Q Consensus 508 a~~Il~~I~~~w~dL~t~~gLRtl~Pa~-------------~P~SYHNGgVWP~LLw~~~lA~lK~Gr~~~A~r~L~~a~ 574 (660)
++++|+.|.+ +|++++|||+++|++ +|.+||||++|||.....++|..++|+.+.|.+++..+.
T Consensus 616 a~~al~~v~~---~L~t~~Girll~p~f~~~~~~~g~~~~Y~pg~~enG~iy~H~~~w~~~a~a~~G~~~~A~~~~~~l~ 692 (822)
T 3rrs_A 616 AIKALDSVNE---MLATDHGMVLQYPAYTTYQVHMGEVSTYPPGYKENGGIFCHNNPWVIIAETVVGRGGRAFDYYKRIT 692 (822)
T ss_dssp HHHHHHHHHH---HTEETTEEBSEESCCSSCCTTSTTGGGSCTTBTTBTCEETTTHHHHHHHHHHHTCHHHHHHHHHHHC
T ss_pred HHHHHHHHHH---HcCCCCeEEEcCCCcccccCCCCcccccCCCccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhC
Confidence 9999999976 799999999999983 299999999999995555556669999999999988652
Q ss_pred --hH----hcCCCcCccccCCC-CCCCCCCCchhhhhhHHH
Q 006131 575 --KR----LSVDQWPEYYDTQS-GRFIGKQSRLHQTWTIAG 608 (660)
Q Consensus 575 --~~----L~~~~~pE~FDG~t-g~p~G~~ac~~QAWSaA~ 608 (660)
.+ ....+.||+|+|.. +......+|.+|+|..|+
T Consensus 693 p~~~~~~~~~~~~~Py~~~~~~~~~~~p~~G~~~~~w~tGs 733 (822)
T 3rrs_A 693 PAYREDISDVHRLEPYVYAQMIAGKEAVRHGEAKNSWLTGT 733 (822)
T ss_dssp HHHHGGGHHHHCSCSSSCEEEECCTTSTTTTCEEEESSSTH
T ss_pred cccccchhHhhccCcEEEeccccccCCCCCCCccchhhhhh
Confidence 22 12358999999876 211223577899997665
No 6
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*
Probab=99.96 E-value=2.3e-29 Score=288.47 Aligned_cols=299 Identities=15% Similarity=0.107 Sum_probs=206.5
Q ss_pred CCcc-cchHHHHHHHHhcCChHHHHHHHHHHhhhcccccccccCCCCCCCCCCcceeeeccCCCCCCCc-cceecCCCCC
Q 006131 227 QVFI-RDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTL-EEVLDPDFGE 304 (660)
Q Consensus 227 ~vFg-RD~vISal~~L~~G~peiar~~L~tla~lQ~~e~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~-e~~l~aD~Ge 304 (660)
..|| ||+++++++++ .++|+++|++|+.++..|..+-. ++|..|...+++-.+..... ...+..+.|+
T Consensus 344 ~~~G~RD~~~~~~~l~-~~~p~~ar~~l~~~~~~Q~~~G~---------~~p~~~p~~~~~~~g~~~~~~~~~~~g~~~~ 413 (807)
T 1v7w_A 344 TGLGYRDTAQDAISVP-HANPEMTRKRIVDLLRGQVKAGY---------GLHLFDPDWFDPEKEDVAPSKSPTVVPTPSD 413 (807)
T ss_dssp CSEEHHHHHHHTTSCT-TTCHHHHHHHHHHHHHTBCTTSC---------BCSEECGGGGCC-------------------
T ss_pred CccCchHHhHHHHHHh-hcCHHHHHHHHHHHHhccccCCC---------cceeeeeccccccccccCCccccccccCCCc
Confidence 4699 99999999955 88999999999999977755431 34432211111000000000 0001111222
Q ss_pred CC--CC-cccCCCcHHHHHHHHHHHHHHhCcHhHHHhh---------hhHHHHHHHHHHHHhCCCCCCCceeecCCCccc
Q 006131 305 SA--IG-RVAPVDSGLWWIILLRAYGKITGDYALQERV---------DVQTGIRLILNLCLTDGFDMFPSLLVTDGSCMI 372 (660)
Q Consensus 305 ~~--~~-yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~---------~~q~~I~~IL~w~l~dgFd~~p~Llv~dGs~w~ 372 (660)
.. ++ .....|+++||++++++|+++|||.+|+++. .+...++++++|+... .+. .+|......+|.
T Consensus 414 ~~~~~g~~~~~~D~~lw~~~~~~~y~~~tGD~~~L~e~~p~~~~~~~~v~e~~~~~~~~~~~~-~~~-~GL~~~~~~DW~ 491 (807)
T 1v7w_A 414 EDKIHGIKDTCSDDHLWLIPTICKYVMETGETSFFDQMIPYADGGEASVYEHMKAALDFSAEY-VGQ-TGICKGLRADWN 491 (807)
T ss_dssp ---CCCGGGCBSSGGGGHHHHHHHHHHHHCCGGGGGCEEECTTSCEEEHHHHHHHHHHHHHHS-BCT-TSCBEEETCSSS
T ss_pred chhhcCCCCCccchhhHHHHHHHHHHHHhCCHHHHhcccccccCCcchHHHHHHHHHHHHHhc-CCC-CCCcccCCCCCC
Confidence 11 11 1223399999999999999999999999973 2234699999999772 123 233222346887
Q ss_pred cccccccCcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhcccccchhhhhh
Q 006131 373 DRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAIN 452 (660)
Q Consensus 373 D~rm~r~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ra~aL~~~~~~~FWld~k~l~~i~r~~te~y~~~a~n 452 (660)
|.--+..|.++|+|||||.||+.+++|++.. |+.+.++++.++++.|++.|+++||.+..+.+.-+
T Consensus 492 D~~~~~~g~~v~~~a~~y~al~~~a~la~~l-G~~~~a~~~~~~A~~lk~~~~~~~w~~~~~~f~~~------------- 557 (807)
T 1v7w_A 492 DCLNLGGGESSMVSFLHFWALQEFIDLAKFL-GKDQDVNTYTEMAANVREACETHLWDDEGGWYIRG------------- 557 (807)
T ss_dssp TTCCCEEEEEHHHHHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHHHHHHHHSEETTTTEECCE-------------
T ss_pred CcCCCCCCeehhHHHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHHHHhccCCCCCeeeee-------------
Confidence 7422228899999999999999999999885 66778899999999999999999997543221100
Q ss_pred hcCCCCCCCcccccccccCCCCceeeccCCCCccccccccchhHHHHhcCCCHHHHHHHHHHHHhhhhhhhcCCCccccC
Q 006131 453 KFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGHMDFRFFTLGNLWAIVSSLGTARQNEGILNLIEAKWDDLVAHMPLKICY 532 (660)
Q Consensus 453 kFni~p~~ip~wl~~wl~~~ggYL~g~v~P~~~d~Rf~slGN~LAilsgLl~~eqa~~Il~~I~~~w~dL~t~~gLRtl~ 532 (660)
+..++-. .+. ....+.+.++.+|.+++++|+++++|++++++.|.+ +|.+++|+|+++
T Consensus 558 ----------------~~~d~~~-~g~--~~~~~~~~~~~~~~~al~~g~~~~e~a~~~l~~v~~---~L~~~~G~~~~~ 615 (807)
T 1v7w_A 558 ----------------LTKNGDK-IGT--AQQQEGRVHLESNTLAVLSGLASQERGEQAMDAVDE---HLFSPYGLHLNA 615 (807)
T ss_dssp ----------------ECTTSCE-ESC--TTCSSCCEEHHHHHHHHHTTCSCHHHHHHHHHHHHH---HHEETTEECSEE
T ss_pred ----------------eccCCCC-cCC--ccCCCCcCcccchHHHHhhCCCCHHHHHHHHHHHHH---hcCCCCceeecC
Confidence 0001100 111 011223556788999999999999999999999976 788999999999
Q ss_pred CCC-------------CCCcccCCCCchhhHHHHHHHHHHcCCcHHHHHHHHHH
Q 006131 533 PAL-------------DPWSYHNGGSWPTLLWQFTLACIKMGRPELAQKAVAMA 573 (660)
Q Consensus 533 Pa~-------------~P~SYHNGgVWP~LLw~~~lA~lK~Gr~~~A~r~L~~a 573 (660)
|++ .|..||||++|||....++.|+.++|+.++|.+++..+
T Consensus 616 p~~~~~~~~~g~~~~y~~~~~enG~~~~~~~~w~~~al~~~G~~d~A~~l~~~~ 669 (807)
T 1v7w_A 616 PSFSTPNDDIGFVTRVYQGVKENGAIFSHPNPWAWVAETKLGRGDRAMKFYDAL 669 (807)
T ss_dssp SCCCSCCTTTCGGGGSCTTBTTBTSEESTTHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CcccccCcCCceeeccCCccccccccccchHHHHHHHHHHcCCHHHHHHHHHHh
Confidence 864 27889999999999777778888999999999998876
No 7
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=99.89 E-value=1.4e-21 Score=229.29 Aligned_cols=327 Identities=17% Similarity=0.143 Sum_probs=226.4
Q ss_pred ccchHHHHHHHHHHHhhccccCccceeEeecCCCCCCCCCCCCCcccchHHHHHHH-HhcCChHHHHHHHHHHhhhcccc
Q 006131 185 EASNIEKEAWKLLRDAVVNYCGNPVGTVAANNPADKQPLNYDQVFIRDFVPSALAF-LLNGEGDIVKNFLLHTLQLQSWE 263 (660)
Q Consensus 185 ~~~~~~~~A~~lLr~~~v~~~~~p~GtlAA~~p~~~~~~nY~~vFgRD~vISal~~-L~~G~peiar~~L~tla~lQ~~e 263 (660)
..+++.+.++..|+..+..+ |. .+ | -...-.|.||+.+.++++ ...|+++++|+.|..+++.|
T Consensus 545 ~lN~l~~~a~~tl~~n~~~~---~t---D~--p-----~REr~~W~gD~~~~a~~~l~~~g~~~lar~~L~~l~~~Q--- 608 (956)
T 2okx_A 545 LLNATWEISRHTTRLCMEDT---FV---DC--P-----SYEQVFWVGDSRNEALVNYYVFGETEIVERCLNLVPGSA--- 608 (956)
T ss_dssp HHHHHHHHHHHHHHHTBSSS---BC---SC--T-----TTTCCCBHHHHHHHHHHHHHHTCCCHHHHHHHHHGGGGT---
T ss_pred HHHHHHHHHHHHHHHhcccC---cc---CC--C-----cccCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhc---
Confidence 35667777777777754433 21 11 1 113458999999999997 44789999999999988433
Q ss_pred cccccCCCCCCCCCCcceeeeccCCCCCCCccceecCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhhhHH
Q 006131 264 KTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQT 343 (660)
Q Consensus 264 ~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~~q~ 343 (660)
...|.+|+.+ |+.. .....|.++||++++++|+++|||.+|+++ +.+
T Consensus 609 -------~~dG~ip~~~-------------------p~~~-----~~~~~~~~~~~i~~~~~yy~~tGD~~~L~e--~yp 655 (956)
T 2okx_A 609 -------DETPLYLDQV-------------------PSAW-----SSVIPNWTFFWILACREYAAHTGNEAFAAR--IWP 655 (956)
T ss_dssp -------TTCTTCCSBS-------------------SCSS-----CCCCHHHHHHHHHHHHHHHHHHTCHHHHHH--HHH
T ss_pred -------ccCCCcCccc-------------------cccc-----cCCCcChHHHHHHHHHHHHHHhCCHHHHHH--HHH
Confidence 3568899843 2111 124568999999999999999999999987 599
Q ss_pred HHHHHHHHHHhCCCCCCCceee-cC-C-CccccccccccCcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHH
Q 006131 344 GIRLILNLCLTDGFDMFPSLLV-TD-G-SCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSAL 420 (660)
Q Consensus 344 ~I~~IL~w~l~dgFd~~p~Llv-~d-G-s~w~D~rm~r~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ra~aL 420 (660)
.|+.+++|+.+.. +. ..+.. +. + .+|.|..-+..|.++..|+++|.||+.+++|++.+ |+.+.++++.+++..|
T Consensus 656 ~lk~~l~~~~~~~-d~-~GLl~~~~~~~~DW~d~~~~~~G~~~~~~a~~~~al~~~a~lA~~L-G~~~~a~~y~~~A~~l 732 (956)
T 2okx_A 656 AVKHTLTHYLEHI-DD-SGLLNMAGWNLLDWAPIDQPNEGIVTHQNLFLVKALRDSRALAAAA-GATEEADAFAARADLL 732 (956)
T ss_dssp HHHHHHHHHHTTB-CT-TSSBCCSSCCCCCSSSCCCCSSSEEHHHHHHHHHHHHHHHHHHHHT-TCGGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHhcC-CC-CCCEEeCCCCccCccCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHH
Confidence 9999999997631 22 22222 22 2 57887422678899999999999999999999885 5556677888888999
Q ss_pred HHHHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceeeccCCCC-ccccccccchhHHHH
Q 006131 421 SFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGH-MDFRFFTLGNLWAIV 499 (660)
Q Consensus 421 ~~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g~v~P~~-~d~Rf~slGN~LAil 499 (660)
++.|+++||.+..+ ++.+.+++.+ ........+|+++++
T Consensus 733 k~ai~~~~wd~~~g----------------------------------------~y~d~~~~~g~~~~~~~~~s~~lall 772 (956)
T 2okx_A 733 AETINAVLWDEEKR----------------------------------------AYIDCIHADGRRSDVYSMQTQVVAYL 772 (956)
T ss_dssp HHHHHHHSEETTTT----------------------------------------EECSEECTTSCBCCCCBHHHHHHHHH
T ss_pred HHHHHHHhcCCCCC----------------------------------------EEEeeecCCCCcccccccHHHHHHHH
Confidence 99999999964432 2222211111 000112468999999
Q ss_pred hcCCCHHHHHHHHHHHHhhhhhhhcCCCccccCCCCCCCcccC-CCCchhhHHHHHHHHHHcCCcHHHHHHHHHHH---h
Q 006131 500 SSLGTARQNEGILNLIEAKWDDLVAHMPLKICYPALDPWSYHN-GGSWPTLLWQFTLACIKMGRPELAQKAVAMAE---K 575 (660)
Q Consensus 500 sgLl~~eqa~~Il~~I~~~w~dL~t~~gLRtl~Pa~~P~SYHN-GgVWP~LLw~~~lA~lK~Gr~~~A~r~L~~a~---~ 575 (660)
+|+++++|+++| +.+. .+- |..||+ |++||+ +.++.|+.++|+.+.|.+++.... .
T Consensus 773 ~Gl~p~~~~~av-~~Ll-------~~~----------~~gy~~~Gt~w~~--~~li~aLar~G~~d~A~~ll~~~~~~~~ 832 (956)
T 2okx_A 773 CGVAQGEREAVI-EGYL-------SSP----------PPAFVQIGSPFMS--FFYYEALEKAGRQTLMLDDIRRNYGQML 832 (956)
T ss_dssp TTCSCHHHHHHH-HHHH-------HSC----------CTTSBCCCSHHHH--HHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHH-HHHh-------cCC----------CcccccCCChhHH--HHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 999999999888 4332 221 568998 999998 556666679999999999987542 2
Q ss_pred HhcCCCcCccccCCCCCCC---CCCCchhhhhhHHHHH-HHHHHhc-CCCccc
Q 006131 576 RLSVDQWPEYYDTQSGRFI---GKQSRLHQTWTIAGYL-TSKMLLE-NPAKAS 623 (660)
Q Consensus 576 ~L~~~~~pE~FDG~tg~p~---G~~ac~~QAWSaA~~L-~a~~lL~-~P~~~~ 623 (660)
......++|.||+.++... ++..+..|+|++|... +.+.++. .|+..+
T Consensus 833 ~~g~tt~~E~~d~~~~~~~~~~~~~~s~nh~Wsag~~~~L~q~l~GI~p~~pG 885 (956)
T 2okx_A 833 RYDATTCWEMYPNFAENRSNPDMLTRSHCHAWSAAPGYFLGSSILGVKRGADG 885 (956)
T ss_dssp HTTCSSCCSSCSSCCTTSSSTTSSCSCSCCGGGCTHHHHHHHTTSCEEECSGG
T ss_pred hcCCCccceeccCCCCCcccCCCcccccCcHHHHHHHHHHHHHhcCccccCCC
Confidence 2344579999998774221 1222346999998744 3444443 454444
No 8
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.87 E-value=5.2e-21 Score=218.74 Aligned_cols=288 Identities=17% Similarity=0.205 Sum_probs=204.0
Q ss_pred CCCcccchHHHHHHHH-hcCChHHHHHHHHHHhhhcccccccccCCCCCCCCCCcceeeeccCCCCCCCccceecCCCCC
Q 006131 226 DQVFIRDFVPSALAFL-LNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGE 304 (660)
Q Consensus 226 ~~vFgRD~vISal~~L-~~G~peiar~~L~tla~lQ~~e~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~Ge 304 (660)
..+|..|..++++..+ ..++++++++.|..+ | |..|.. +
T Consensus 338 R~~W~GD~~~~~~~~~~~~~~~~~~~~~l~~~---~-------------g~~p~~--------------------~---- 377 (739)
T 3cih_A 338 RWVWSGDAIQSYLMNYYLFFDSESVKRTIWLL---R-------------GKDPVT--------------------S---- 377 (739)
T ss_dssp CCCCHHHHHHHHHHHHTTTCCHHHHHHHHHHH---H-------------CCSSCC--------------------S----
T ss_pred cceecCchHHHHHHHHHHhCCHHHHHHHHHHh---c-------------cCCCCc--------------------c----
Confidence 3589999999998854 357899999887554 2 334430 1
Q ss_pred CCCCcccC-CCcHHHHHHHHHHHHHHhCcHhHHHhhhhHHHHHHHHHHHHhCCCCCCCceeecCC----Ccccccccccc
Q 006131 305 SAIGRVAP-VDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLTDGFDMFPSLLVTDG----SCMIDRRMGIH 379 (660)
Q Consensus 305 ~~~~yygs-VDAtLWfIIal~~Y~k~TGD~~f~~~~~~q~~I~~IL~w~l~dgFd~~p~Llv~dG----s~w~D~rm~r~ 379 (660)
++++ +|.++||++++++|+++|||.+|+++ +.+.|+.+++|+.+.. +....+....| .+|+|..+++.
T Consensus 378 ----~~~~~~d~~l~wi~~~~~yy~~tGD~~~L~e--~~p~l~~~ld~~~~~~-d~~GL~~~~~G~W~~~dW~d~~~~~~ 450 (739)
T 3cih_A 378 ----HSNTIMDYTFYWFLSVYDYYMYSGDRHFVNQ--LYPRMQTMMDYVLGRT-NKNGMVEGMSGDWVFVDWADGYLDKK 450 (739)
T ss_dssp ----SGGGBHHHHHHHHHHHHHHHHHHCCHHHHHH--HHHHHHHHHHHHHTTB-CTTSCBCCCTTCBCCSCCCTTCCCCS
T ss_pred ----ccCCccchhHHHHHHHHHHHHHhCCHHHHHH--HHHHHHHHHHHHHHhc-CCCCCcccCCCCcccCCCcccccCCC
Confidence 2333 79999999999999999999999998 5999999999997721 12122222222 48888657899
Q ss_pred CcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCCC
Q 006131 380 GHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPD 459 (660)
Q Consensus 380 G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ra~aL~~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~ 459 (660)
|.++++|+|||.||+.+++|++.. |+.+.++++.+++..|++.|+++||.+.++.
T Consensus 451 G~~~~~~a~~y~al~~~a~lA~~l-G~~~~A~~y~~~A~~lk~a~~~~~wd~~~G~------------------------ 505 (739)
T 3cih_A 451 GELSFEQVLFCRSLETMALCADLV-GDKDGQQKYEKLASALKAKLEPTFWNNQKQA------------------------ 505 (739)
T ss_dssp SEEHHHHHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHHHHHHHHHEETTTTE------------------------
T ss_pred CcchHHHHHHHHHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHHHHHhccCcccCe------------------------
Confidence 999999999999999999999885 5677788999999999999999999643321
Q ss_pred CCcccccccccCCCCceeeccCCCCccccccccchhHHHHhcCCCHHHHHHHHHHHHhhhhhhhcCCCccccCCCCCCCc
Q 006131 460 QIPSWLVDWIPNEGGYLIGNLEPGHMDFRFFTLGNLWAIVSSLGTARQNEGILNLIEAKWDDLVAHMPLKICYPALDPWS 539 (660)
Q Consensus 460 ~ip~wl~~wl~~~ggYL~g~v~P~~~d~Rf~slGN~LAilsgLl~~eqa~~Il~~I~~~w~dL~t~~gLRtl~Pa~~P~S 539 (660)
|..+..+..+.| ......|++++++|+++++++++|++.+... +..
T Consensus 506 ---------------y~~~~~~G~~~d-~~~~~s~~laL~~Gl~~~e~~~~v~~~L~~~------------------~~~ 551 (739)
T 3cih_A 506 ---------------FVHNCVDGRQSD-AVTRYANMFSVFFDYLNADKQQAIKQSVLLN------------------DEI 551 (739)
T ss_dssp ---------------ECSEEETTEECS-CCCHHHHHHHHHTTCSCHHHHHHHHHHTTTC------------------TTS
T ss_pred ---------------eEeecCCCCcCc-ccchHHhHHHHHHCCCCHHHHHHHHHHHhcC------------------ccc
Confidence 221111111111 1233478999999999999999998876431 123
Q ss_pred ccCCCCchhhHHHHHHHHHHcCCcHHHHHHHHHH-HhHhcC--CCcCccccCCCCC---------CCCCCCchhhhhhHH
Q 006131 540 YHNGGSWPTLLWQFTLACIKMGRPELAQKAVAMA-EKRLSV--DQWPEYYDTQSGR---------FIGKQSRLHQTWTIA 607 (660)
Q Consensus 540 YHNGgVWP~LLw~~~lA~lK~Gr~~~A~r~L~~a-~~~L~~--~~~pE~FDG~tg~---------p~G~~ac~~QAWSaA 607 (660)
||+| ||++.+.++.|+.++|+.+.|.+++... ...+.. ..++|.||+.... +.+...|. +|+++
T Consensus 552 ~~~~--tp~~~~~~~~aL~~~G~~d~A~~ll~~~w~~~v~~Gattl~E~~~~~~~~~~~~~~~g~~~~~s~~H--aW~ag 627 (739)
T 3cih_A 552 LKIT--TPYMRFYELEALCALGEQETVMKEMKAYWGGMLKAGATSFWEKYNPEESGTQHLAMYGRPYGKSLCH--AWGAS 627 (739)
T ss_dssp CCCC--SHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTTCSSCCSCCCTTCCGGGGGCBTTBTTCSCSSB--GGGCT
T ss_pred cccc--chhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCceeEEecccccCCcccccccccccCccccc--ccccc
Confidence 6777 6888888888888999999999988754 222333 3789999986411 11223333 79987
Q ss_pred H-HHHHHHHhc-CCCccc
Q 006131 608 G-YLTSKMLLE-NPAKAS 623 (660)
Q Consensus 608 ~-~L~a~~lL~-~P~~~~ 623 (660)
. ..+.+.++. .|+.++
T Consensus 628 ~~~~l~~~ilGI~p~~pg 645 (739)
T 3cih_A 628 PIYLLGKYYLGVKPTKEG 645 (739)
T ss_dssp HHHHHHHHTSCEEEEEGG
T ss_pred hHHHHHHHHhccCcCCCC
Confidence 4 555566554 554443
No 9
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=99.81 E-value=1.7e-18 Score=204.88 Aligned_cols=350 Identities=16% Similarity=0.117 Sum_probs=221.6
Q ss_pred cchHHHHHHHHHHHhhccccCccceeEeecCCCCCC------CC-CCCCCcccchHHHHHHHHhcCChHHHHHHHHHHhh
Q 006131 186 ASNIEKEAWKLLRDAVVNYCGNPVGTVAANNPADKQ------PL-NYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQ 258 (660)
Q Consensus 186 ~~~~~~~A~~lLr~~~v~~~~~p~GtlAA~~p~~~~------~~-nY~~vFgRD~vISal~~L~~G~peiar~~L~tla~ 258 (660)
.+.++.+++..|+.+. +.-++-+.+||...+--+ .. .|.-+|+||+.+++++++..|.+++++.+|..+++
T Consensus 282 ~~~~~~rSl~~Lk~l~--~~~t~GaiiAS~t~p~~e~~gg~rn~dgYry~W~RDaa~t~~all~~G~~e~A~~~l~~L~~ 359 (1020)
T 1ulv_A 282 LRTQYDVSLMTVKSHE--DKTFPGAFIASLTIPWGQAASAETHREGYHAVWARDMYQSVTALLAAGDEEAAARGVEWLFT 359 (1020)
T ss_dssp HHHHHHHHHHHHHTTB--CSSSTTCBCSCSSCTTGGGSBCSSCCCTTCSBCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc--CCCCCCeEEEeCCCCcccccCCccCCCCCceEccchHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4556677777776641 211134444654321111 11 38889999999999999999999999999999998
Q ss_pred hcccccccccCCCCCCCCCCcceeeeccCCCCCCCccceecCCCCCCCCCccc--CCCcHHHHHHHHHHHHHHhCcHhHH
Q 006131 259 LQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVA--PVDSGLWWIILLRAYGKITGDYALQ 336 (660)
Q Consensus 259 lQ~~e~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~Ge~~~~yyg--sVDAtLWfIIal~~Y~k~TGD~~f~ 336 (660)
+|.. +.|.++..|.| + |+ + +++ ..|.+.++++++.+|.+ + |
T Consensus 360 ~Q~~---------~~G~~~~~y~i------------------~-G~-~--~w~~~Q~D~~g~~l~~~~~~~~-~-d---- 402 (1020)
T 1ulv_A 360 YQQQ---------PDGHFPQTSRV------------------D-GT-I--GQNGIQLDETAFPILLANQIGR-T-D---- 402 (1020)
T ss_dssp HTCC---------TTSCCCSCBCT------------------T-SC-B--CCCCCBTHHHHHHHHHHHHHTC-C-C----
T ss_pred HhcC---------CCCCeeeEEec------------------C-CC-c--CCCCccCccchHHHHHHHHHHh-c-C----
Confidence 8752 23556665421 1 11 1 233 78999999999999976 4 5
Q ss_pred HhhhhHH-HHHHHHHHHHhCCCCCCCceeecCCCccccccccccCcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHH
Q 006131 337 ERVDVQT-GIRLILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINN 415 (660)
Q Consensus 337 ~~~~~q~-~I~~IL~w~l~dgFd~~p~Llv~dGs~w~D~rm~r~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ 415 (660)
+. +++ .|+.+++|+.+.+ ..++-..|-|+ .|+-....++.|.||+++++|++.. ++.+.++++.+
T Consensus 403 ~~--~w~~~v~~al~~i~~~g-------~~~~~~~WEe~----~g~~~~t~~~~~~AL~~aa~lA~~~-G~~~~a~~w~~ 468 (1020)
T 1ulv_A 403 AG--FYRNELKPAADYLVAAG-------PKTPQERWEET----GGYSTSTLASQIAALAAAADIAGKN-GDAGSAAVYRA 468 (1020)
T ss_dssp HH--HHHHTHHHHHHHHHHHC-------SCBSBCTTSSC----CBEEHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHH
T ss_pred HH--HHHHHHHHHHHHHHHhC-------CCCChhhhccc----CCcCHHHHHHHHHHHHHHHHHHHHc-CChhHHHHHHH
Confidence 22 466 8999999998742 23444568773 5778889999999999999999875 56778889999
Q ss_pred HHHHHHHHHHhhhhcch-----hhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceeeccCCCCcccccc
Q 006131 416 RLSALSFHVREYYWVDM-----KKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGHMDFRFF 490 (660)
Q Consensus 416 ra~aL~~~~~~~FWld~-----k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g~v~P~~~d~Rf~ 490 (660)
.+.+|++.|+++||.+. ++.+. |.-.. + ++. .--.-++.+.+..+.+ -..+| .
T Consensus 469 ~Ad~i~~~i~~~~w~~~g~~~~~g~f~--r~~~d--g----~~~--------~~~~~~~~n~~~~~~~---~~~lD---a 526 (1020)
T 1ulv_A 469 TADEWQRSTEKWMFTTNGPVGDGKYYL--RISAT--G----NPN--------DGATRDWGNGAGVHPE---NAVLD---G 526 (1020)
T ss_dssp HHHHHHHTHHHHHEESSCSSTTSCEEC--SEESS--S----CTT--------SCCEEECSTTCCEEEG---GGCCB---G
T ss_pred HHHHHHHHHHHhCCCCcccccccCeeE--EEecC--C----Ccc--------cccccccccccccCCC---CCeee---H
Confidence 99999999999999764 22111 00000 0 000 0000111111111110 01122 1
Q ss_pred ccchhHHHHhcCCCHH--HHHHHHHHHHhhhhhhh--cCCCccccCCCCCCCccc---C---------CCCchhhHHHHH
Q 006131 491 TLGNLWAIVSSLGTAR--QNEGILNLIEAKWDDLV--AHMPLKICYPALDPWSYH---N---------GGSWPTLLWQFT 554 (660)
Q Consensus 491 slGN~LAilsgLl~~e--qa~~Il~~I~~~w~dL~--t~~gLRtl~Pa~~P~SYH---N---------GgVWP~LLw~~~ 554 (660)
++ ++.+.+|+++++ +..+-++.|++ .|. ++.| .....+++.+|| | |++||..-.-++
T Consensus 527 s~--l~l~~~G~~~~~dpr~~~Tl~~i~~---~L~~~~~~G--~~~~RY~~D~Y~~~~dG~~~~~~g~g~~W~l~T~wla 599 (1020)
T 1ulv_A 527 GF--LEFVRLGVKAPADPYVADSLAETDA---SISQETPGG--RMWHRYTYDGYGEKADGSPWDGTGIGRLWPLLSGERG 599 (1020)
T ss_dssp GG--GHHHHTTSSCTTCHHHHHHHHHHHH---HHEEEETTE--EEECSBTTCCCSCCTTSCCCSSCCCCCBCTHHHHHHH
T ss_pred HH--HHHHHhCCCCCCcHHHHHHHHHHHH---HhcccCCCC--ceeecCCccccccccCCCcccCCCCCChHHHHHHHHH
Confidence 12 222358986655 55666677765 344 2223 234566677787 4 679998755556
Q ss_pred HHHHHcCCcHHHHHHHHHHHhHh-cCCCcCccccC-CC----CCCCCCC--CchhhhhhHHHHHHHHHHhcCC
Q 006131 555 LACIKMGRPELAQKAVAMAEKRL-SVDQWPEYYDT-QS----GRFIGKQ--SRLHQTWTIAGYLTSKMLLENP 619 (660)
Q Consensus 555 lA~lK~Gr~~~A~r~L~~a~~~L-~~~~~pE~FDG-~t----g~p~G~~--ac~~QAWSaA~~L~a~~lL~~P 619 (660)
.++++.|+ .|.++++.+..+- ..+.+||.||. .+ +-+.|.+ +|.|||||.|++|.+.+.+.+.
T Consensus 600 e~~~~~G~--~A~~~~~~l~~~a~~~GllpEq~~~g~~~~~~~~~tG~p~~g~~PqaWSha~~I~~~~~l~~~ 670 (1020)
T 1ulv_A 600 EYALANGQ--DALPYLETMHSAANAGYMIPEQVWDRDEPTSYGHELGRSTGSASPLSWAMAQYVRLAAGVKAG 670 (1020)
T ss_dssp HHHHHTTC--CCHHHHHHHHHTSCTTCCCCSCBBCCSSCCSSCCCBTSBCSSCBSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhhH--HHHHHHHHHHHhccccCCcceeecccccccccCCcCCccccCCcHHHHHHHHHHHHHHHHhCC
Confidence 67777887 6888888776554 34689999995 22 1123332 7889999999988777665543
No 10
>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A*
Probab=99.80 E-value=4.9e-18 Score=193.20 Aligned_cols=340 Identities=15% Similarity=0.098 Sum_probs=222.0
Q ss_pred ccchHHHHHHHHHHHhhccccCccceeE-eecCCC------CCCCCCCCCCcccchHHHHHHHHhcCChHHHHHHHHHHh
Q 006131 185 EASNIEKEAWKLLRDAVVNYCGNPVGTV-AANNPA------DKQPLNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTL 257 (660)
Q Consensus 185 ~~~~~~~~A~~lLr~~~v~~~~~p~Gtl-AA~~p~------~~~~~nY~~vFgRD~vISal~~L~~G~peiar~~L~tla 257 (660)
..+.++.+++..|+.+. + .+|.|.+ ||...+ ......|.-+|+||+++++++++..|.+++++.++..++
T Consensus 293 ~~~~~~~rs~~~Lk~l~--~-~~~~G~iiAs~t~~~~e~~~~~~~~dY~~~W~RD~~~~~~al~~~G~~~~a~~~l~~l~ 369 (684)
T 1lf6_A 293 KANSLYYNSMMILKASE--D-KTNKGAYIASLSIPWGDGQRDDNTGGYHLVWSRDLYHVANAFIAAGDVDSANRSLDYLA 369 (684)
T ss_dssp TCCHHHHHHHHHHHTTB--C-SSSTTCBCSCSSCTTGGGSBSBSCCGGGSBCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcc--C-CCCCccEEeecCCCCccccCCCCCCCCEEEeccHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34566777777776641 1 1456777 543111 011246899999999999999998999999999999999
Q ss_pred hhcccccccccCCCCCCCCCCcceeeeccCCCCCCCccceecCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHH
Q 006131 258 QLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQE 337 (660)
Q Consensus 258 ~lQ~~e~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~ 337 (660)
+.|... |-++..+ +. .+ + |..|. ...|++.++++++..| ..+|
T Consensus 370 ~~q~~~----------G~~~~~~---~~---~G----~----p~w~~------~Q~D~~g~~l~~~~~~-~~~g------ 412 (684)
T 1lf6_A 370 KVVKDN----------GMIPQNT---WI---SG----K----PYWTG------IQLDEQADPIILSYRL-KRYD------ 412 (684)
T ss_dssp HHHHHH----------SSCCSCB---CT---TS----C----BCCCC------CCHHHHHHHHHHHHHT-TCGG------
T ss_pred hhcCCC----------CCcccce---eC---CC----C----cccCC------ccccchHHHHHHHHHH-HHcC------
Confidence 877532 3344422 10 00 0 21211 3499999999998855 4455
Q ss_pred hhhhHHH-HHHHHHHHHhCCCCCCCceeecCCCccccccccccCcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHH
Q 006131 338 RVDVQTG-IRLILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNR 416 (660)
Q Consensus 338 ~~~~q~~-I~~IL~w~l~dgFd~~p~Llv~dGs~w~D~rm~r~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~r 416 (660)
+++. ++.+++|+.+-+ -.++...|-|+ .|.-..+.+..|.||+++++|++.. ++.+.++++.+.
T Consensus 413 ---~~~~~v~~al~~i~~~~-------~~~~~g~WE~~----~g~~~~t~~~~~~aL~~~a~lA~~~-g~~~~a~~~~~~ 477 (684)
T 1lf6_A 413 ---LYDSLVKPLADFIIKIG-------PKTGQERWEEI----GGYSPATMAAEVAGLTCAAYIAEQN-KDYESAQKYQEK 477 (684)
T ss_dssp ---GTTTTHHHHHHHHHHHC-------SSBSSCTTSSC----CBBCHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHH
T ss_pred ---chHHHHHHHHHHHHHhC-------CCCCccccccc----CCcCHHHHHHHHHHHHHHHHHHHHc-CChHHHHHHHHH
Confidence 3666 888999998732 33455568773 4677888999999999999999874 566788899999
Q ss_pred HHHHHHHHHhhhhcch-----hhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCC--C--ceeeccCCC-Ccc
Q 006131 417 LSALSFHVREYYWVDM-----KKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEG--G--YLIGNLEPG-HMD 486 (660)
Q Consensus 417 a~aL~~~~~~~FWld~-----k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~g--g--YL~g~v~P~-~~d 486 (660)
+.+|+..|.++||.+. ++.+. ..+| ...+ | +.+.+-.+. ..+
T Consensus 478 a~~i~~~i~~~~w~~~~~~g~~~~f~---------------------r~~~-------d~~~~~~~~~~~~~~~~~~~~~ 529 (684)
T 1lf6_A 478 ADNWQKLIDNLTYTENGPLGNGQYYI---------------------RIAG-------LSDPDADFMINIANGGGVYDQK 529 (684)
T ss_dssp HHHHHHHHHHHHEESSCSSTTSCEEC---------------------SCBS-------SSCTTSCCEEEETTTTEEEEGG
T ss_pred HHHHHHHHHHhccCCCcccccCCeeE---------------------EEec-------cCCCccccccccccccccCCCC
Confidence 9999999999999754 22111 0000 0000 0 011000000 001
Q ss_pred ccccccchhHHHHhcCCCHH--HHHHHHHHHHhhhhhhhcC--CCccccCCCCCCCccc----------C--CCCchhhH
Q 006131 487 FRFFTLGNLWAIVSSLGTAR--QNEGILNLIEAKWDDLVAH--MPLKICYPALDPWSYH----------N--GGSWPTLL 550 (660)
Q Consensus 487 ~Rf~slGN~LAilsgLl~~e--qa~~Il~~I~~~w~dL~t~--~gLRtl~Pa~~P~SYH----------N--GgVWP~LL 550 (660)
...++ .-++++++|+++++ +..+.++.|++ +|... .| .....+++..|| + |++||+..
T Consensus 530 ~~lDa-s~l~~~~~G~~~~~dpr~~~Tl~~i~~---~L~~~~~~G--~~~~RY~~d~y~~~~~G~~f~~~g~g~~W~~~t 603 (684)
T 1lf6_A 530 EIVDP-SFLELVRLGVKSADDPKILNTLKVVDS---TIKVDTPKG--PSWYRYNHDGYGEPSKTELYHGAGKGRLWPLLT 603 (684)
T ss_dssp GCCCG-GGGHHHHTTSSCTTCHHHHHHHHHHHH---HSEEEETTE--EEECSSTTCCCSCSBTTBCCSSSSCCCBBHHHH
T ss_pred CcEeH-HHhHHHhcCCcCCCCHHHHHHHHHHHH---HhccCCCCC--CeEeccCCCCCCcccCCCccccCCCCCchHHHH
Confidence 11122 22344579988665 77877888865 45322 22 122334445554 4 79999987
Q ss_pred HHHHHHHHHcCCcHHHHHHHHHHHhHh-cCCCcCccccCCCCCCCCCCCchhhhhhHHHHHHHHHHhc
Q 006131 551 WQFTLACIKMGRPELAQKAVAMAEKRL-SVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYLTSKMLLE 617 (660)
Q Consensus 551 w~~~lA~lK~Gr~~~A~r~L~~a~~~L-~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~lL~ 617 (660)
..++.++++.|+ .|.++++.+..+- ..+.+||-||+.+|+|.|. |.|||||-|++|.+...|.
T Consensus 604 ~~~a~al~~~G~--~A~~~~~~l~~~a~~~gllpE~~~~~~g~~~G~--a~PqaWSha~~i~~~~~l~ 667 (684)
T 1lf6_A 604 GERGMYEIAAGK--DATPYVKAMEKFANEGGIISEQVWEDTGLPTDS--ASPLNWAHAEYVILFASNI 667 (684)
T ss_dssp HHHHHHHHHTTC--CCHHHHHHHHHHSCTTSCCCSCBCTTTCCBCSS--CSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCh--HHHHHHHHHHHhcccCCccCeeecCCCCCCCCC--CcchHHHHHHHHHHHHHHh
Confidence 777888889998 7888888776543 3469999999999888754 3599999999988766554
No 11
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A
Probab=99.30 E-value=2.6e-10 Score=125.86 Aligned_cols=327 Identities=13% Similarity=0.088 Sum_probs=198.0
Q ss_pred CccceeEeecCCCCCCCCCCCCCcccchHHHHHHHHhcCC--------hHHHHHHHHHHhhhcccccccccCCCCCCCCC
Q 006131 206 GNPVGTVAANNPADKQPLNYDQVFIRDFVPSALAFLLNGE--------GDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMP 277 (660)
Q Consensus 206 ~~p~GtlAA~~p~~~~~~nY~~vFgRD~vISal~~L~~G~--------peiar~~L~tla~lQ~~e~~ld~~~~~~GliP 277 (660)
+.|.|.|.|+... ....|.-+|.||+.+++.+++..|. .+.++.++...+.+|.... ..|-++
T Consensus 46 ~~~~GaiIASptt--snpDYrY~W~RDaa~t~~aL~~~g~~~~~~~~l~~~a~~y~~~~~~lq~~~~-------~~G~~~ 116 (492)
T 2fba_A 46 NGVPGTVIASPST--SNPDYYYQWTRDSAITFLTVLSELEDNNFNTTLAKAVEYYINTSYNLQRTSN-------PSGSFD 116 (492)
T ss_dssp TSCTTCBCSCSCB--SSSBCCSEEHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTSCB-------TTBCTT
T ss_pred CCCCCeEEEeCCC--CCCCCeEEccchHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHHhcccC-------CCCCcC
Confidence 4557777444221 2346999999999999999887776 8999999997555554321 223333
Q ss_pred C-cceeeecc---CCCCCCCccceecCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHH--------H-----hhh
Q 006131 278 A-SFKVRTVP---LDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQ--------E-----RVD 340 (660)
Q Consensus 278 ~-sFKV~h~~---~~~~~~~~e~~l~aD~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~--------~-----~~~ 340 (660)
. ...++-|| +++ + ...+..| --.-|.+-+.++++.+|.++..+.... . ..+
T Consensus 117 ~~~~~glgep~y~vdG-----~-~~~~~w~------~~Q~D~~g~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (492)
T 2fba_A 117 DENHKGLGEPKFNTDG-----S-AYTGAWG------RPQNDGPALRAYAISRYLNDVNSLNEGKLVLTDSGDINFSSTED 184 (492)
T ss_dssp SGGGGGGGCCEECTTS-----C-BCCSCCS------CCBTTHHHHHHHHHHHHHHHHHHHSTTCCSSTTCTTCSCSSHHH
T ss_pred cccccccCceeeccCC-----C-cCCcccC------CccccchhHHHHHHHHHHHHhhccccchhhhhhhccccccccHH
Confidence 1 11111111 111 0 0011111 145788999999999997765444322 0 012
Q ss_pred hH-HHHHHHHHHHHhCCCCCCCceeecCCCccccccccccCcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 006131 341 VQ-TGIRLILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSA 419 (660)
Q Consensus 341 ~q-~~I~~IL~w~l~dgFd~~p~Llv~dGs~w~D~rm~r~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ra~a 419 (660)
++ +.|+.+++++.+-. + .++-.-|=. |.|+-....+--+.||.++++|++.. ++.+.++++.+.+..
T Consensus 185 ~~~~~i~~~l~~v~~~w----~---~pd~dlWEe----r~g~~~~T~~~~~~AL~~aa~lA~~~-g~~~~a~~w~~~ad~ 252 (492)
T 2fba_A 185 IYKNIIKPDLEYVIGYW----D---STGFDLWEE----NQGRHFFTSLVQQKALAYAVDIAKSF-DDGDFANTLSSTAST 252 (492)
T ss_dssp HHHHTHHHHHHHHHHHT----T---SCEECTTSC----CEECCHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc----C---CCCCCCcCc----cCCCChHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHH
Confidence 44 78999999987621 1 134345644 33667789999999999999999874 556677778777777
Q ss_pred HHHHHHhh---hhcchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceeecc------CCCCcccccc
Q 006131 420 LSFHVREY---YWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNL------EPGHMDFRFF 490 (660)
Q Consensus 420 L~~~~~~~---FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g~v------~P~~~d~Rf~ 490 (660)
++..+.++ ||-+. .||+.... ....+|.
T Consensus 253 i~~~I~~~~~~~w~~~----------------------------------------~~~f~~~~~~~~~~~~~~lDa--- 289 (492)
T 2fba_A 253 LESYLSGSDGGFVNTD----------------------------------------VNHIVENPDLLQQNSRQGLDS--- 289 (492)
T ss_dssp HHHHHHSTTTCCEETT----------------------------------------TTEECSSHHHHHTTSCCSCCT---
T ss_pred HHHHHHHhhhcCCCCC----------------------------------------CCEEEEeccccccCCCCcccH---
Confidence 77778766 77432 23333222 2223442
Q ss_pred ccchhHHHH---hc-------CC--CHHHHHHHHHHHHhhhhhhhcCCCcc------ccCCCCCCCcccC-----CCCch
Q 006131 491 TLGNLWAIV---SS-------LG--TARQNEGILNLIEAKWDDLVAHMPLK------ICYPALDPWSYHN-----GGSWP 547 (660)
Q Consensus 491 slGN~LAil---sg-------Ll--~~eqa~~Il~~I~~~w~dL~t~~gLR------tl~Pa~~P~SYHN-----GgVWP 547 (660)
++|.+. ++ +. +..+..+-++.|++ +|...+|+. .+--.++.-.|.. |+.|+
T Consensus 290 ---s~Ll~~~~~f~~~~~~~~~~~p~Dpr~l~Tl~ai~~---~L~~~~pin~~~~~g~~v~RY~~D~y~g~~~~~g~pw~ 363 (492)
T 2fba_A 290 ---ATYIGPLLTHDIGESSSTPFDVDNEYVLQSYYLLLE---DNKDRYSVNSAYSAGAAIGRYPEDVYNGDGSSEGNPWF 363 (492)
T ss_dssp ---HHHHHHHHHSCTTSCCCCSCCTTCHHHHHHHHHHHH---HHHHHCGGGTTCSSCCCCCSCTTCCBCSSSBSSCCCBH
T ss_pred ---HHHHHHHhccccccccCCccCCCCHHHHHHHHHHHH---HHhcccCccccCcceeEEEeCCCCCCCCCCccCCCcHH
Confidence 122221 32 23 23355555566654 676666552 1222333334655 78888
Q ss_pred hh-HHHHH---HHH----HHcC-------------------------C----------------------cHHHHHHHHH
Q 006131 548 TL-LWQFT---LAC----IKMG-------------------------R----------------------PELAQKAVAM 572 (660)
Q Consensus 548 ~L-Lw~~~---lA~----lK~G-------------------------r----------------------~~~A~r~L~~ 572 (660)
.. +|+.- .|+ .+.| + .+.|+.+++.
T Consensus 364 lcT~w~ae~ly~al~~~~~~~g~~~i~~~~~~f~~~~~~~~~~~~~G~~~~~~~~y~~~~~~~~~~~~~~~~~A~~~l~~ 443 (492)
T 2fba_A 364 LATAYAAQVPYKLAYDAKSASNDITINKINYDFFNKYIVDLSTINSAYQSSDSVTIKSGSDEFNTVADNLVTFGDSFLQV 443 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCEEEEGGGHHHHHHHTCCGGGTCTTGGGSSEEEECTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCceecchhhHHHHHhhhhhhccccccccccccceeccCchhHHHHHHHHHHHHHHHHHH
Confidence 76 55422 022 2444 4 4678888888
Q ss_pred HHhHh-cCCCcCccccCCCCCCCCCCCchhhhhhHHHHHHHHHHhc
Q 006131 573 AEKRL-SVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYLTSKMLLE 617 (660)
Q Consensus 573 a~~~L-~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~lL~ 617 (660)
+..+- ..+-+||=||..+|++.|- .+||||=|++|.+...+.
T Consensus 444 ~~~~~~~~GllsEq~d~~tG~~~ga---~PltwSha~li~aa~~~~ 486 (492)
T 2fba_A 444 ILDHINDDGSLNEQLNRYTGYSTGA---YSLTWSSGALLEAIRLRN 486 (492)
T ss_dssp HHHHSCTTSCCCSEECTTTCCEESS---TTCHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCCCccccCCCCCCCCCc---cchHHHHHHHHHHHHHHh
Confidence 77665 4578999999999988854 499999999998776553
No 12
>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A*
Probab=99.25 E-value=7.8e-10 Score=121.66 Aligned_cols=313 Identities=16% Similarity=0.142 Sum_probs=186.9
Q ss_pred CccceeE-eecCCCCCCCCCCCCCcccchHHHHHHHH---hcCChHHHHHHHHHHhh---hcccccccccCCCCCCCCC-
Q 006131 206 GNPVGTV-AANNPADKQPLNYDQVFIRDFVPSALAFL---LNGEGDIVKNFLLHTLQ---LQSWEKTVDCYSPGQGLMP- 277 (660)
Q Consensus 206 ~~p~Gtl-AA~~p~~~~~~nY~~vFgRD~vISal~~L---~~G~peiar~~L~tla~---lQ~~e~~ld~~~~~~GliP- 277 (660)
+.|.|.+ ||... ....|.-+|.||+.+++.+++ ..|..++++.++..+.. +|.... ..|-++
T Consensus 31 ~~~tGaiIASptt---snpDYrY~W~RDaa~t~~aL~~~~~~G~~~~a~~~~~~l~~~~~lQ~~~~-------~~G~l~~ 100 (472)
T 1gai_A 31 GADSGIVVASPST---DNPDYFYTWTRDSGLVIKTLVDLFRNGDTDLLSTIEHYISSQAIIQGVSN-------PSGDLSS 100 (472)
T ss_dssp TCCTTCBCSCSCB---SSSBCCSEEHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHCCB-------TTBCTTT
T ss_pred CCCCceEEeeCCC---CCCCCeEEchhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhcccC-------CCCcccc
Confidence 3456666 44332 234699999999999999988 78888887777777654 553221 223233
Q ss_pred -----CcceeeeccCCCCCCCccceecCCCCCCCCCcccCCCc-----HHHHHHHHHHHHHHhCcHhHHHhhhhHHHHHH
Q 006131 278 -----ASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDS-----GLWWIILLRAYGKITGDYALQERVDVQTGIRL 347 (660)
Q Consensus 278 -----~sFKV~h~~~~~~~~~~e~~l~aD~Ge~~~~yygsVDA-----tLWfIIal~~Y~k~TGD~~f~~~~~~q~~I~~ 347 (660)
..|- +++ + ...++.|. -..|. +-..+.+++ +..+|+.++++. ++++.|+.
T Consensus 101 ~glgE~~y~-----vdG-----~-~~~~~w~~------~Q~D~~g~ra~~~~~~~~~--l~~~g~~~~~~~-~~w~~i~~ 160 (472)
T 1gai_A 101 GGLGEPKFN-----VDE-----T-AYTGSWGR------PQRDGPALRATAMIGFGQW--LLDNGYTSAATE-IVWPLVRN 160 (472)
T ss_dssp TGGGCCEEC-----TTS-----C-BCCSCCSC------CCTHHHHHHHHHHHHHHHH--HHHTTCHHHHHH-THHHHHHH
T ss_pred CCCCCceEc-----cCC-----C-ccCCcCCC------ccccccchhHHHHHHHHHH--HHHcCCccccch-hHHHHHHH
Confidence 2221 111 0 01111111 22455 333455554 566899877654 37899999
Q ss_pred HHHHHHhCCCCCCCceeecCCCccccccccccCcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhh
Q 006131 348 ILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREY 427 (660)
Q Consensus 348 IL~w~l~dgFd~~p~Llv~dGs~w~D~rm~r~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ra~aL~~~~~~~ 427 (660)
+++++.+-. ..+|-.-|=. |.|+-....+.-+.||..+++|++..+.. +.+..+.+.+++..+ ++
T Consensus 161 ~l~~v~~~w-------~~pd~dlWEe----r~g~~~~T~~~~~~AL~~aa~lA~~~g~~---~~~w~~~ad~I~~~i-~~ 225 (472)
T 1gai_A 161 DLSYVAQYW-------NQTGYDLWEE----VNGSSFFTIAVQHRALVEGSAFATAVGSS---CSWCDSQAPQILCYL-QS 225 (472)
T ss_dssp HHHHHHHHT-------TSCEECTTSC----CEEEEHHHHHHHHHHHHHHHHHHHHTTCC---CHHHHHHHHHHHHHH-GG
T ss_pred HHHHHHHhc-------CCCCCCCCcc----cCCCCHHHHHHHHHHHHHHHHHHHHcCCc---HHHHHHHHHHHHHHH-Hh
Confidence 999997621 1133345644 34667788899999999999999875443 445555666667777 77
Q ss_pred hhcchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceeecc--CCCCccccccccchhHHHHhcC---
Q 006131 428 YWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNL--EPGHMDFRFFTLGNLWAIVSSL--- 502 (660)
Q Consensus 428 FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g~v--~P~~~d~Rf~slGN~LAilsgL--- 502 (660)
||- . .|...+. +...+|. .-+|+.+.+.
T Consensus 226 ~w~--g----------------------------------------~f~~~~~~~~~~~lDa-----s~LL~~~~~f~p~ 258 (472)
T 1gai_A 226 FWT--G----------------------------------------SYILANFDSSRSGKDT-----NTLLGSIHTFDPE 258 (472)
T ss_dssp GBC--S----------------------------------------SSBCSEESCCSCCCCT-----HHHHHHHTTCCTT
T ss_pred hcC--C----------------------------------------ceEEeecCCCCCCcCH-----HHHHhhhccCCcc
Confidence 872 1 1111110 1123442 1122222332
Q ss_pred ---------CCHHHHHHHHHHHHhhhhhhhcCCCccc--------cCCCCCCCcccCCCCchhh-HHHHHHHHH------
Q 006131 503 ---------GTARQNEGILNLIEAKWDDLVAHMPLKI--------CYPALDPWSYHNGGSWPTL-LWQFTLACI------ 558 (660)
Q Consensus 503 ---------l~~eqa~~Il~~I~~~w~dL~t~~gLRt--------l~Pa~~P~SYHNGgVWP~L-Lw~~~lA~l------ 558 (660)
.+..+..+-++.|++ +|..-||+.. +--.++.-.|..|+.|..- +|+ +.++.
T Consensus 259 ~~~~~~~~~p~Dpr~l~Tl~ai~~---~L~~~y~i~~~~~~g~g~~v~RY~~D~y~gg~pw~lcT~wl-ae~l~~a~~~~ 334 (472)
T 1gai_A 259 AGCDDSTFQPCSPRALANHKEVVD---SFRSIYTLNDGLSDSEAVAVGRYPEDSYYNGNPWFLCTLAA-AEQLYDALYQW 334 (472)
T ss_dssp CCSCTTTTCTTSHHHHHHHHHHHH---TTTTTCGGGTTCCTTSCCCCCSCTTCCGGGSCCBHHHHHHH-HHHHHHHHHHH
T ss_pred ccccccCCCCCCHHHHHHHHHHHH---HHHHhcCcCCCCcCcccceEEeCCCCCCCCCCcHHHHHHHH-HHHHHHHHHHh
Confidence 033455555666655 5664444432 2223444467789988877 554 32222
Q ss_pred -----------------------HcC----------CcHH-----HHHHHHHHHhHh-cCCCcCccccCCCCCCCCCCCc
Q 006131 559 -----------------------KMG----------RPEL-----AQKAVAMAEKRL-SVDQWPEYYDTQSGRFIGKQSR 599 (660)
Q Consensus 559 -----------------------K~G----------r~~~-----A~r~L~~a~~~L-~~~~~pE~FDG~tg~p~G~~ac 599 (660)
+.| +.++ |+++++.+..+- ..+-+||=||..+|++.|-
T Consensus 335 ~~~~~i~~~~~~~~ff~~~~~~~~~G~~~~~~~~~~~~~~~~~~~A~~~~e~~~~~~~~~GllsEq~d~~tG~~~gn--- 411 (472)
T 1gai_A 335 DKQGSLEITDVSLDFFKALYSGAATGTYSSSSSTYSSIVSAVKTFADGFVSIVETHAASNGSLSEQFDKSDGDELSA--- 411 (472)
T ss_dssp HHHTEEEECTTTHHHHHHHCTTCCSEEEETTSHHHHHHHHHHHHHHHHHHHHHHHHSCTTCCCCSEECTTTCCEESS---
T ss_pred hccCceeecchhHHHHHhhcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHCCCCCCcccccCCCCCCCCCc---
Confidence 145 3334 777888776655 4578999999999988854
Q ss_pred hhhhhhHHHHHHHHHHhc
Q 006131 600 LHQTWTIAGYLTSKMLLE 617 (660)
Q Consensus 600 ~~QAWSaA~~L~a~~lL~ 617 (660)
.+||||=+++|.+-..+.
T Consensus 412 ~PlawSha~lI~aa~~l~ 429 (472)
T 1gai_A 412 RDLTWSYAALLTANNRRN 429 (472)
T ss_dssp SSCHHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHh
Confidence 599999999999888876
No 13
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=99.22 E-value=2.9e-09 Score=120.17 Aligned_cols=320 Identities=15% Similarity=0.127 Sum_probs=188.3
Q ss_pred CccceeE-eecCCCCCCCCCCCCCcccchHHHHHHHH----hcCChHHHHHHHHHHhh---hcccccccccCCCCCCCCC
Q 006131 206 GNPVGTV-AANNPADKQPLNYDQVFIRDFVPSALAFL----LNGEGDIVKNFLLHTLQ---LQSWEKTVDCYSPGQGLMP 277 (660)
Q Consensus 206 ~~p~Gtl-AA~~p~~~~~~nY~~vFgRD~vISal~~L----~~G~peiar~~L~tla~---lQ~~e~~ld~~~~~~GliP 277 (660)
+.|.|.+ ||... ....|.-+|.||+.+++.+++ ..|..+.++.++..+.. ||..-. ..|-.|
T Consensus 30 ~~~tGaiIAsptt---s~pDYrY~W~RDaa~t~~aL~~~~~~~G~~~~a~~~~~~l~~~~~lQ~~y~-------~~G~~~ 99 (599)
T 2vn4_A 30 GTSAGAVIASPST---IDPDYYYMWTRDSALVFKNLIDRFTETYDAGLQRRIEQYITAQVTLQGLSN-------PSGSLA 99 (599)
T ss_dssp TSCTTCBCSCSCC---SSSCCCSEEHHHHHHHHHHHHHHHHHSBCHHHHHHHHHHHHHHHHHHHCCB-------TTBCST
T ss_pred CCCCceEEEECCC---CCCCCeEEchhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHhcccceeeeeC-------CCCCcc
Confidence 4456767 44332 234799999999999999988 89999999999998863 553221 223333
Q ss_pred CcceeeeccCCCCCCCccceecCCCCCC---CCCcccCCCc-----HHHHHHHHHHHHHHhCcHhHHHhhhhHHHHHHHH
Q 006131 278 ASFKVRTVPLDGGDGTLEEVLDPDFGES---AIGRVAPVDS-----GLWWIILLRAYGKITGDYALQERVDVQTGIRLIL 349 (660)
Q Consensus 278 ~sFKV~h~~~~~~~~~~e~~l~aD~Ge~---~~~yygsVDA-----tLWfIIal~~Y~k~TGD~~f~~~~~~q~~I~~IL 349 (660)
.. +.+.|| +. ..| |.. +-++ -.-|. +-..+.+++ +..+|+.++++. ++++.|+.++
T Consensus 100 ~~-~~l~E~---------~~-~ld-G~~~~~~w~~-~Q~D~~glr~~~~~~~~~~--~~~~g~~~~~~~-~~w~~v~~~l 163 (599)
T 2vn4_A 100 DG-SGLGEP---------KF-ELT-LKPFTGNWGR-PQRDGPALRAIALIGYSKW--LINNNYQSTVSN-VIWPIVRNDL 163 (599)
T ss_dssp TS-GGGGCC---------EE-CTT-SCBCCSCCSC-CCTHHHHHHHHHHHHHHHH--HHHTTCHHHHHH-HTHHHHHHHH
T ss_pred cc-cCcCce---------EE-ecC-CccccCcCCC-eeccccchhHHHHHHHHHH--HHHhCCcccccH-HHHHHHHHHH
Confidence 21 111111 01 111 111 1110 22344 434555554 467899888764 3689999999
Q ss_pred HHHHhCCCCCCCceeecCCCccccccccccCcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhhhh
Q 006131 350 NLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYW 429 (660)
Q Consensus 350 ~w~l~dgFd~~p~Llv~dGs~w~D~rm~r~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ra~aL~~~~~~~FW 429 (660)
+++.+.. + .+|-.-|=. |.|+-....+.-+.||.++++|++..+.. +.+..+.+.+++..+ ++||
T Consensus 164 ~~v~~~w----~---~~d~dlWEe----r~g~~~~T~~~~~~aL~~aa~lA~~~g~~---~~~w~~~ad~i~~~i-~~~w 228 (599)
T 2vn4_A 164 NYVAQYW----N---QTGFDLWEE----VNGSSFFTVANQHRALVEGATLAATLGQS---GSAYSSVAPQVLCFL-QRFW 228 (599)
T ss_dssp HHHHHHT----T---SCEECTTSC----CEEEEHHHHHHHHHHHHHHHHHHHHHTCC---CHHHHHHHHHHHHHH-GGGE
T ss_pred HHHHHhC----C---CCCCCeeee----cCCcchHHHHHHHHHHHHHHHHHHHcCCC---HHHHHHHHHHHHHHH-Hhhc
Confidence 9997621 1 133345644 34666778899999999999999876443 344555556666677 7788
Q ss_pred cchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceeecc----CCCCccccccccchhHHHHhcC---
Q 006131 430 VDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNL----EPGHMDFRFFTLGNLWAIVSSL--- 502 (660)
Q Consensus 430 ld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g~v----~P~~~d~Rf~slGN~LAilsgL--- 502 (660)
.+. + .|...+. ....+|. .-+|+.+.+.
T Consensus 229 ~~~-g---------------------------------------~f~~~~~~~~~~~~~lDa-----s~LL~~~~~f~~~ 263 (599)
T 2vn4_A 229 VSS-G---------------------------------------GYVDSNINTNEGRTGKDV-----NSVLTSIHTFDPN 263 (599)
T ss_dssp ETT-T---------------------------------------TEECSEESSCCCCCCCBT-----HHHHHHHHSCCGG
T ss_pred CCC-C---------------------------------------CEEEEecCccCCCCCcCH-----HHHhhhhccCCcc
Confidence 532 1 1221111 1223442 1122222332
Q ss_pred ---------CCHHHHHHHHHHHHhhhhhhhcCCCccc--------cCCCCCCCcccCCCCchhh-HHHHHH---HHHH--
Q 006131 503 ---------GTARQNEGILNLIEAKWDDLVAHMPLKI--------CYPALDPWSYHNGGSWPTL-LWQFTL---ACIK-- 559 (660)
Q Consensus 503 ---------l~~eqa~~Il~~I~~~w~dL~t~~gLRt--------l~Pa~~P~SYHNGgVWP~L-Lw~~~l---A~lK-- 559 (660)
.+..+..+-++.|++ +|..-||+.. +--.++.-.|..|+.|..- +|+.-. |+.+
T Consensus 264 ~~~~~~~~~p~dpr~l~Tl~ai~~---~L~~~y~i~~g~~~g~~~~v~RY~~D~y~Gg~pw~lcT~w~ae~l~~a~~~~~ 340 (599)
T 2vn4_A 264 LGCDAGTFQPCSDKALSNLKVVVD---SFRSIYGVNKGIPAGAAVAIGRYAEDVYYNGNPWYLATFAAAEQLYDAIYVWK 340 (599)
T ss_dssp GTTCTTTTCTTSHHHHHHHHHHHH---HHHTTCGGGTTCCTTSCCCCCSBTTCCGGGCCCBHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCCCHHHHHHHHHHHH---HHHhhcCcCCCCcCCceeEEEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhhh
Confidence 133455555666655 5654444432 1122334456678888776 554211 1111
Q ss_pred -----------------------cCCc---------------HHHHHHHHHHHhHh-cCCCcCccccCCCCCCCCCCCch
Q 006131 560 -----------------------MGRP---------------ELAQKAVAMAEKRL-SVDQWPEYYDTQSGRFIGKQSRL 600 (660)
Q Consensus 560 -----------------------~Gr~---------------~~A~r~L~~a~~~L-~~~~~pE~FDG~tg~p~G~~ac~ 600 (660)
.|+. +.|+++++.+..+- ..+-+||=||..+|++.|- .
T Consensus 341 ~~g~i~~~~~~~~ff~~~~~~~~~G~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~a~~~GllsEqvd~~~G~~~gn---~ 417 (599)
T 2vn4_A 341 KTGSITVTATSLAFFQELVPGVTAGTYSSSSSTFTNIINAVSTYADGFLSEAAKYVPADGSLAEQFDRNSGTPLSA---L 417 (599)
T ss_dssp HHTEEEECTTTHHHHHHHSTTCCSEEEETTSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCCSEECTTTCCEESS---S
T ss_pred ccCceeeccchhHHHhhhcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCccCCc---c
Confidence 3433 22777777766554 4578999999999988754 5
Q ss_pred hhhhhHHHHHHHHHHhc
Q 006131 601 HQTWTIAGYLTSKMLLE 617 (660)
Q Consensus 601 ~QAWSaA~~L~a~~lL~ 617 (660)
|||||=|++|.+...++
T Consensus 418 PlawSha~lI~a~~~~~ 434 (599)
T 2vn4_A 418 HLTWSYASFLTATARRA 434 (599)
T ss_dssp SCHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHh
Confidence 99999999998888775
No 14
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=99.13 E-value=9.5e-10 Score=120.88 Aligned_cols=343 Identities=16% Similarity=0.144 Sum_probs=216.6
Q ss_pred hccccCccceeEeecCCCCCCCCCCCCCcccchHHHHHHH--HhcCChHHHHHHHHHHhhhcccccccccCCCCCCCCCC
Q 006131 201 VVNYCGNPVGTVAANNPADKQPLNYDQVFIRDFVPSALAF--LLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPA 278 (660)
Q Consensus 201 ~v~~~~~p~GtlAA~~p~~~~~~nY~~vFgRD~vISal~~--L~~G~peiar~~L~tla~lQ~~e~~ld~~~~~~GliP~ 278 (660)
-|.+.+.|.=+|..||=. .-|-||+.-=..-. |+..+|++ +..++.+.+.|.+-...|+|.-.- .-|.
T Consensus 87 tv~~~~~~~tfViTGDI~--------AmWLRDS~~Q~~pYl~l~~~d~~l-~~li~G~i~rq~~~i~~dPYaNAF-~~~~ 156 (489)
T 2p0v_A 87 TVHFDGKEDTFVYTGDIH--------AMWLRDSGAQVWPYVQLANKDPEL-KKMLAGVINRQFKCINIDPYANAF-NMNS 156 (489)
T ss_dssp TEEECSSSCEEECCBSSS--------SEEHHHHHHHSGGGGGGGGGCHHH-HHHHHHHHHHHHHHHHHCTTCSEE-CSSS
T ss_pred heeeCCCCCEEEEeCCcc--------chhhcccHHHHHHHHHHhccCHHH-HHHHHHHHHHHHHHhccCcccccc-CCCC
Confidence 456677777778777532 67999987654442 56778888 888888889999988888885210 1111
Q ss_pred cceeeeccCCCCCCCccceecCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhhhHHHHHHHHHHHHh-CCC
Q 006131 279 SFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLT-DGF 357 (660)
Q Consensus 279 sFKV~h~~~~~~~~~~e~~l~aD~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~~q~~I~~IL~w~l~-dgF 357 (660)
.-.. |.. | ...+.|-. +.+=--+|++--+|.+++.|++.|||.+|... ....+|+.|++++.. +..
T Consensus 157 ~~~~-~~~----d---~t~~~P~v----~E~KyElDSla~~L~la~~Yy~~TgD~~~f~~-~w~~av~~il~~l~~eq~~ 223 (489)
T 2p0v_A 157 EGGE-WMS----D---LTDMKPEL----HERKWEIDSLCYPIRLAYHYWKTTGDASVFSD-EWLQAIANVLKTFKEQQRK 223 (489)
T ss_dssp CCCG-GGG----S---SSCCCTTE----EECCCCHHHHHHHHHHHHHHHHHHCCCTTSSH-HHHHHHHHHHHHHHHTTCS
T ss_pred CCCC-CCC----C---CCCCCccc----ccccchhhhhHHHHHHHHHHHHHhCCchhhHH-HHHHHHHHHHHHHHHHhcc
Confidence 0000 110 0 01112211 11112799999999999999999999999976 366899999999966 211
Q ss_pred CC------C--------Ccee-------e-cCCCcccccc----ccccCcccchhHHHHHHHHHHHHHHhhcCCChHHHH
Q 006131 358 DM------F--------PSLL-------V-TDGSCMIDRR----MGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVA 411 (660)
Q Consensus 358 d~------~--------p~Ll-------v-~dGs~w~D~r----m~r~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~ 411 (660)
+. | ++|- | +-|..|---| .-++|+-+..|+..|.||+.+++|++..+++.++++
T Consensus 224 ~~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~tGLi~S~fRPSDDa~~yg~~ipSN~~a~v~L~~aaeia~~v~~d~~la~ 303 (489)
T 2p0v_A 224 DDAKGPYRFQRKTERALDTMTNDGWGNPVKPVGLIASAFRPSDDATTFQFLVPSNFFAVTSLRKAAEILNTVNRKPALAK 303 (489)
T ss_dssp SCSSCSCCCCCCBSCGGGSCHHHHTCSCCCCSSCCCCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHHHHH
T ss_pred cCCCCCceEeecCCCcccccccCCCCCccCCCCceeCCCCCCCcchhcCcchHHHHHHHHHHHHHHHHHHHhccCHHHHH
Confidence 11 0 0110 0 1133222111 256899999999999999999999988766778888
Q ss_pred HHHHHHHHHHHHHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceeeccCCCCccccccc
Q 006131 412 AINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGHMDFRFFT 491 (660)
Q Consensus 412 ~l~~ra~aL~~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g~v~P~~~d~Rf~s 491 (660)
++.+.+.++++.|.+|.|++..+...+|.|....|| +++. || ++
T Consensus 304 ~~~~lA~eI~~gI~~~gv~~~p~~G~ifAyEVDG~G--------------------------~~~~-------mD---Da 347 (489)
T 2p0v_A 304 ECTALADEVEKALKKYAVCNHPKYGKIYAFEVDGFG--------------------------NQLL-------MD---DA 347 (489)
T ss_dssp HHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSSS--------------------------CEEC-------CC---CS
T ss_pred HHHHHHHHHHHHHHHhCEecCCCCccEEEEEecCCC--------------------------Cccc-------CC---CC
Confidence 888888888888988888765443334444333222 2221 22 11
Q ss_pred -cchhHHH-HhcCCC--HHHHHHHHHHHHhhhhhhhcCCCccccCCCCC-CCcccC--CCCchhhHHHHHHHHHHcCCcH
Q 006131 492 -LGNLWAI-VSSLGT--ARQNEGILNLIEAKWDDLVAHMPLKICYPALD-PWSYHN--GGSWPTLLWQFTLACIKMGRPE 564 (660)
Q Consensus 492 -lGN~LAi-lsgLl~--~eqa~~Il~~I~~~w~dL~t~~gLRtl~Pa~~-P~SYHN--GgVWP~LLw~~~lA~lK~Gr~~ 564 (660)
.+.+|++ .+|.++ .+.-+.-++.|+++ + .||..+- +..+ -.+=|- |.+||.-+...+ +..++.+
T Consensus 348 nvpSLLslPylG~~~~dDpiy~nTr~~IlS~---~-NPyy~~G--~~~~GIGspH~~~~~~Wpmsll~~a---lts~d~~ 418 (489)
T 2p0v_A 348 NVPSLIALPYLGDVKVTDPIYQNTRKFVWSE---D-NPYFFKG--SAGEGIGGPHIGYDMIWPMSIMMKA---FTSQNDA 418 (489)
T ss_dssp SSSCSTTHHHHTSSCTTCHHHHHHHHHHTST---T-STTEEEC--SSCEEECCTTTCTTEECHHHHHHHH---HTCCCHH
T ss_pred CccHHHHHHHhCCCCCCCHHHHHHHHHHHhh---c-CCccccc--ccccCCCCCCCCCCchHHHHHHHHH---HhcCCHH
Confidence 2334554 366644 44666667777653 3 4555541 1111 112233 557776533333 3478889
Q ss_pred HHHHHHHHHHh-HhcCCCcCccccCCCCCCCCCCCchhhhhhHHHHHHHHH
Q 006131 565 LAQKAVAMAEK-RLSVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYLTSKM 614 (660)
Q Consensus 565 ~A~r~L~~a~~-~L~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~ 614 (660)
++++.|.-+.+ ....+-++|=||-+++.+. .+.+.|||-+.|..+-.
T Consensus 419 E~~~~L~~l~~t~~gtGLmhEs~d~~~~~~~---TR~wFaWanslF~e~il 466 (489)
T 2p0v_A 419 EIKTCIKMLMDTDAGTGFMHESFNKNDPKNF---TRAWFAWQNTLFGELIL 466 (489)
T ss_dssp HHHHHHHHHHHTSTTSCSCCSEEETTEEEEE---ECSCBHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCCeeeeeECCCCCCcC---CCcccHHHHHHHHHHHH
Confidence 99999987654 3567899999999997666 44599999998765443
No 15
>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A*
Probab=98.75 E-value=3.7e-07 Score=99.04 Aligned_cols=358 Identities=12% Similarity=0.032 Sum_probs=220.4
Q ss_pred cchHHHHHHHHHHHhhccccCccceeEeecCCCCCCCCCCCCCcccchH--HHHHHHHhcCChHHHHHHHHHHhhhcccc
Q 006131 186 ASNIEKEAWKLLRDAVVNYCGNPVGTVAANNPADKQPLNYDQVFIRDFV--PSALAFLLNGEGDIVKNFLLHTLQLQSWE 263 (660)
Q Consensus 186 ~~~~~~~A~~lLr~~~v~~~~~p~GtlAA~~p~~~~~~nY~~vFgRD~v--ISal~~L~~G~peiar~~L~tla~lQ~~e 263 (660)
...|.+.++--=-...|.+.+.+.-+|..||=. .-|-||+. +....-|+..+|++ +..++.+...|.+-
T Consensus 25 l~~lF~n~~pnTldTtv~~~~~~~tFviTGDI~--------AmWLRDS~~Ql~pY~~l~~~d~~l-~~li~G~I~rQ~~~ 95 (426)
T 3qry_B 25 WVDVFERCYTDTLDNTVEILEDGSTFVLTGDIP--------AMWLRDSTAQLRPYLHVAKRDALL-RQTIAGLVKRQMTL 95 (426)
T ss_dssp HHHHHHHHHHHHHHHSEEECTTSCEEECSSSSS--------EEEHHHHHHHHGGGHHHHTTCHHH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHhccchhhheeEecCCCCEEEEeCCCc--------chhhccCHHHHHHhHHHhccCHHH-HHHHHHHHHHHHHH
Confidence 345566666533344577878777788888632 68999998 55555577888987 77888889999998
Q ss_pred cccccCCCCCCCCCCcceeeeccCCCCCCCccceecCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhhhHH
Q 006131 264 KTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQT 343 (660)
Q Consensus 264 ~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~~q~ 343 (660)
...|+|.-.--.-|+. . .|. +.-..+....-+.+==-+||--.+|-+.+.|++.|||.+|... +...
T Consensus 96 i~~dPYaNAF~~~~~~-~-~~~----------~~d~t~~~~~v~E~KyElDSL~~~l~La~~y~~~Tgd~~~f~~-~w~~ 162 (426)
T 3qry_B 96 VLKDPYANSFNIEENW-K-GHH----------ETDHTDLNGWIWERKYEVDSLCYPLQLAYLLWKETGETSQFDE-IFVA 162 (426)
T ss_dssp HHHCTTCSEEESSSCC-C-SST----------TTEESCCCTTEEECCCCHHHHHHHHHHHHHHHHHHCCCTTCSH-HHHH
T ss_pred hccCcccccCCCCCCC-C-Ccc----------CCCCCCCCCeeEeeccHHhhhHHHHHHHHHHHHhhCChhhhhH-HHHH
Confidence 8888885210000110 0 000 0000111111122334599999999999999999999998875 5789
Q ss_pred HHHHHHHHHHhC-CCCCC------------Ccee-------e-cCCCccccc----cccccCcccchhHHHHHHHHHHHH
Q 006131 344 GIRLILNLCLTD-GFDMF------------PSLL-------V-TDGSCMIDR----RMGIHGHPLEIQSLFYSALRCSRE 398 (660)
Q Consensus 344 ~I~~IL~w~l~d-gFd~~------------p~Ll-------v-~dGs~w~D~----rm~r~G~PlEVQALwY~ALr~aae 398 (660)
+++.||+-...+ +.... ++|. | +-|..|--= ..-++||.+--|++..-||+.+++
T Consensus 163 a~~~il~~~~~eq~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~~~~~iPsN~~~~v~L~~~ae 242 (426)
T 3qry_B 163 ATKEILHLWTVEQDHKNSPYRFVRDTDRKEDTLVNDGFGPDFAVTGMTWSAFRPSDDCCQYSYLIPSNMFAVVVLGYVQE 242 (426)
T ss_dssp HHHHHHHHHHHTTSGGGCCCCCEECCSCGGGSCHHHHTCSCCCCCSSCCCSBCTTSSBCSSSEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCceeeecCCCCCccccCCCCCCCcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHHHHH
Confidence 999999988652 22110 1110 0 123333211 135678999999999999999999
Q ss_pred HHhh--cCCChHHHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCce
Q 006131 399 MLIV--NDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYL 476 (660)
Q Consensus 399 L~~~--~~g~~~~a~~l~~ra~aL~~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL 476 (660)
|+.. ..++.++++++.+.+.++++.|.+|..++..+.-.||.|....||. ++
T Consensus 243 i~~~~~v~~d~~la~~~~~la~eIr~~I~k~gvv~h~~~g~iyAyEVDG~Gs--------------------------~~ 296 (426)
T 3qry_B 243 IFAALNLADSQSVIADAKRLQDEIQEGIKNYAYTTNSKGEKIYAFEVDGLGN--------------------------AS 296 (426)
T ss_dssp HHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHSEEECTTCCEEECSEECSSSC--------------------------BC
T ss_pred HHHhccccCcHHHHHHHHHHHHHHHHHHHHhcEecCCCcceEEEEEeccCCC--------------------------cc
Confidence 9973 4466778888888888888889988887765555555555544432 22
Q ss_pred eeccCCCCccccccccchhHHH-HhcCC--CHHHHHHHHHHHHhhhhhhhcCCCccccCCCCC-CCcccCCCCchhhHHH
Q 006131 477 IGNLEPGHMDFRFFTLGNLWAI-VSSLG--TARQNEGILNLIEAKWDDLVAHMPLKICYPALD-PWSYHNGGSWPTLLWQ 552 (660)
Q Consensus 477 ~g~v~P~~~d~Rf~slGN~LAi-lsgLl--~~eqa~~Il~~I~~~w~dL~t~~gLRtl~Pa~~-P~SYHNGgVWP~LLw~ 552 (660)
+ ||. -..+.+|++ .+|.+ +.+.-+.-.+.|+++ . .|+=.+- ++.+ -.+-|.|.-.||.+..
T Consensus 297 l-------mDD--aNvPSLLslPylGf~~~dDpiYqNTrk~IlS~---~-NPyy~~G--~~~~GiG~PH~~~~~~Wpmsl 361 (426)
T 3qry_B 297 I-------MDD--PNVPSLLAAPYLGYCSVDDEVYQATRRTILSS---E-NPYFYQG--EYASGLGSSHTFYRYIWPIAL 361 (426)
T ss_dssp C-------CCC--SSSSCSTTTTTTTSSCTTCHHHHHHHHHHTST---T-STTEEEC--SSCEEECCTTSCTTEECHHHH
T ss_pred c-------cCC--CCchhHHHHHHcCCCCCCCHHHHHHHHHHhcc---c-CCceecc--CccCcCCCCCCCCCCchHHHH
Confidence 1 220 112335555 35553 334444455666442 2 3331111 1111 3556766644444344
Q ss_pred HHHHHHHcCCcHHHHHHHHHHHhH-hcCCCcCccccCCCCCCCCCCCchhhhhhHHHHH
Q 006131 553 FTLACIKMGRPELAQKAVAMAEKR-LSVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYL 610 (660)
Q Consensus 553 ~~lA~lK~Gr~~~A~r~L~~a~~~-L~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L 610 (660)
+..+ +..+..+++++.|..+.+. ...+-+.|=||-+++... .|...+|+=+.|-
T Consensus 362 ~~~~-lTs~d~~Ei~~~L~~l~~t~~gtGlmHEsvd~~~~~~~---TR~WFaWaN~lF~ 416 (426)
T 3qry_B 362 SIQG-LTTRDKAEKKFLLDQLVACDGGTGVMHESFHVDDPTLY---SREWFSWANMMFC 416 (426)
T ss_dssp HHHH-HTCSCHHHHHHHHHHHHHTSTTSSSCCSEEETTEEEEE---ECSCCHHHHHHHH
T ss_pred HHHH-HhCCCHHHHHHHHHHHHhcCCCCCeeeeeECCCCCCcc---CCCchhhhhHHHH
Confidence 4333 2256778888888876544 456889999999985433 4459999988754
No 16
>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A*
Probab=98.62 E-value=8.8e-07 Score=96.97 Aligned_cols=340 Identities=15% Similarity=0.091 Sum_probs=211.0
Q ss_pred ccceeEeecCCCCCCCCCCCCCcccchHHHHHHH--HhcCChHHHHHHHHHHhhhcccccccccCCCCCCCCCCcceeee
Q 006131 207 NPVGTVAANNPADKQPLNYDQVFIRDFVPSALAF--LLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRT 284 (660)
Q Consensus 207 ~p~GtlAA~~p~~~~~~nY~~vFgRD~vISal~~--L~~G~peiar~~L~tla~lQ~~e~~ld~~~~~~GliP~sFKV~h 284 (660)
.|.-+|..||=. .-|-||+.-=..-. |+..++++ +..++.+...|.+-...|+|.-.----|++- --|
T Consensus 75 ~~~tFviTGDI~--------AmWLRDS~~Q~~pYl~l~~~d~~l-~~li~G~I~rQ~~~i~~dPYaNAF~~~~~sg-~~~ 144 (463)
T 3p2c_A 75 KPDTFVYTGDIH--------AMWLRDSGAQVWPYVQLANSDPEL-KEMLAGVILRQFKCINIDPYANAFNDGAIPD-GHW 144 (463)
T ss_dssp CEEEEECCBSSC--------SEEHHHHHHHTGGGGGGGGGCHHH-HHHHHHHHHHHHHHHHHCTTCSEECSSCCTT-CTT
T ss_pred CCCEEEEeCCCc--------chhcccCHHHHHHHHHHhccCHHH-HHHHHHHHHHHHHHhccCccccccCCCCCCC-Ccc
Confidence 466677777631 67999987654443 56778887 7788888999999888888752100012110 000
Q ss_pred ccCCCCCCCccceecCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhhhHHHHHHHHHHHHhC-CCCC---C
Q 006131 285 VPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLTD-GFDM---F 360 (660)
Q Consensus 285 ~~~~~~~~~~e~~l~aD~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~~q~~I~~IL~w~l~d-gFd~---~ 360 (660)
. .| ...+.| .-+.+==-+||--.+|-+++.|++.|||.++..+ +...+++.||+-+..+ ..+. |
T Consensus 145 ~----~d---~t~~~p----~v~ErKyElDSL~~~l~La~~y~~~Tgd~~~f~~-~w~~a~~~il~~~~~~q~~~~~s~Y 212 (463)
T 3p2c_A 145 M----SD---LTDMKP----ELHERKWEIDSLCYPLRLAYHYWKTTGDASIFNE-EWIQAITNVLKTFKEQQRKDGVGPY 212 (463)
T ss_dssp T----TS---BSCCCT----TEEECCCCHHHHHHHHHHHHHHHHHHCCCTTCSH-HHHHHHHHHHHHHHHTTCSSSSCSC
T ss_pred c----CC---CCCCCC----cEEEEecHhhhhhHHHHHHHHHHHhhCChhhhcH-HHHHHHHHHHHHHHHHhccCCCCCc
Confidence 0 00 000111 1111334599999999999999999999998865 5789999999988642 2210 0
Q ss_pred ----------Ccee-------e-cCCCccccc----cccccCcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 006131 361 ----------PSLL-------V-TDGSCMIDR----RMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLS 418 (660)
Q Consensus 361 ----------p~Ll-------v-~dGs~w~D~----rm~r~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ra~ 418 (660)
++|. + +-|..|--= ..-++||.+--|++...+|+.+++|+....++.++++++.+.+.
T Consensus 213 ~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~~~~~iPsN~~a~v~L~~aaei~~~l~~d~~la~~~~~lA~ 292 (463)
T 3p2c_A 213 KFQRKTERALDTVSNDGLGAPVKPVGLIVSSFRPSDDATTLQFLVPSNFFAVSSLRKAAEILEKVNKKTALSKECKDLAQ 292 (463)
T ss_dssp CCBCCBSCGGGSCHHHHTCSCCCCSSCCBCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred eEeecCCCCCcccCCCCcCCCcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 1110 0 123333211 13567899999999999999999999877678889999999999
Q ss_pred HHHHHHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceeeccCCCCccccccccchhHHH
Q 006131 419 ALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGHMDFRFFTLGNLWAI 498 (660)
Q Consensus 419 aL~~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g~v~P~~~d~Rf~slGN~LAi 498 (660)
++++.|.+|.+++..+.-.||.|....|| ++++ ||. -..+.+|++
T Consensus 293 eIr~gI~k~gvv~~p~~G~iyAyEVDG~G--------------------------s~~l-------mDD--aNvPSLLsl 337 (463)
T 3p2c_A 293 EVETALKKYAVYNHPKYGKIYAFEVDGFG--------------------------NHHL-------MDD--ANVPSLLAM 337 (463)
T ss_dssp HHHHHHHHHSEEEETTTEEEECSEECSSS--------------------------CEEC-------CCC--SSSSCSTTH
T ss_pred HHHHHHHHhCEecCCCCceEEEEEEecCC--------------------------CccC-------CCC--CCchhHHHH
Confidence 99999999988765544445545443332 2221 220 112345666
Q ss_pred -HhcCCCH--HHHHHHHHHHHhhhhhhhcCCCccccCCCCC-CCcccCCCCchhhHHHHHHHHHHcCCcHHHHHHHHHHH
Q 006131 499 -VSSLGTA--RQNEGILNLIEAKWDDLVAHMPLKICYPALD-PWSYHNGGSWPTLLWQFTLACIKMGRPELAQKAVAMAE 574 (660)
Q Consensus 499 -lsgLl~~--eqa~~Il~~I~~~w~dL~t~~gLRtl~Pa~~-P~SYHNGgVWP~LLw~~~lA~lK~Gr~~~A~r~L~~a~ 574 (660)
.+|.++. +.-+.-.+.|+++ . .||=.|- ++.+ -.+-|.|.-.||.+..+..+ +..+..+++++.|.-+.
T Consensus 338 PylGf~~~dDpiYqNTrk~IlS~---~-NPyY~~G--~~~~GiG~PH~~~~~~Wpmsll~~~-lTs~d~~Ei~~~L~~l~ 410 (463)
T 3p2c_A 338 PYLGDVNVNDPIYQNTRRFVWSE---D-NPYFFKG--KAGEGIGGPHIGYDMVWPMSIMMKA-FTSQNDAEIKTCIKMLM 410 (463)
T ss_dssp HHHTSSCTTCHHHHHHHHHHTST---T-STTEEEC--SSCEEECCTTTCTTEECHHHHHHHH-HTCCCHHHHHHHHHHHH
T ss_pred HHcCCCCCCCHHHHHHHHHHHhc---c-CCceecc--CccccCCCCCCCCCCchHHHHHHHH-hccCCHHHHHHHHHHHH
Confidence 4666443 4444555566442 2 3331110 1111 34556666444444444433 33677889999998775
Q ss_pred hH-hcCCCcCccccCCCCCCCCCCCchhhhhhHHHHHHHH
Q 006131 575 KR-LSVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYLTSK 613 (660)
Q Consensus 575 ~~-L~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~ 613 (660)
+. ...+-+.|=||-+++... .+.+.||+=+.|.-+-
T Consensus 411 ~t~~gtGlmHEsvd~~~~~~~---TR~WFaWaNs~F~eli 447 (463)
T 3p2c_A 411 DTDAGTGFMHESFHKDNPKKF---TRAWFAWQNTLFGELI 447 (463)
T ss_dssp HTSTTSSSCCSEEETTEEEEE---ECSCBHHHHHHHHHHH
T ss_pred hcCCCCCeeeeeECCCCCCcC---CCCchhhhhHHHHHHH
Confidence 54 467889999999986555 4459999999866443
No 17
>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A
Probab=98.58 E-value=2.2e-06 Score=92.98 Aligned_cols=356 Identities=14% Similarity=0.095 Sum_probs=221.1
Q ss_pred cchHHHHHHHHHHHhhccccCccceeEeecCCCCCCCCCCCCCcccchH--HHHHHHHhcCChHHHHHHHHHHhhhcccc
Q 006131 186 ASNIEKEAWKLLRDAVVNYCGNPVGTVAANNPADKQPLNYDQVFIRDFV--PSALAFLLNGEGDIVKNFLLHTLQLQSWE 263 (660)
Q Consensus 186 ~~~~~~~A~~lLr~~~v~~~~~p~GtlAA~~p~~~~~~nY~~vFgRD~v--ISal~~L~~G~peiar~~L~tla~lQ~~e 263 (660)
...|.+.++--=-...|.+ +.|.-+|..||=. .-|-||+. +....-|+..+|+++ ..++.+...|.+-
T Consensus 28 l~~lF~n~~pnTldTtv~~-~~~~tFviTGDI~--------AmWLRDS~~Ql~pY~~l~~~d~~l~-~li~G~I~rQ~~~ 97 (427)
T 3qt9_A 28 LQELFYNCFINTMDTTVEV-SEGDAFVITGDIP--------AMWLRDSTSQVEHYLPFVKEYPELK-AIFTGLINRQVKC 97 (427)
T ss_dssp HHHHHHHHHHHHHHHTEEE-ETTEEEECCBSSC--------SEEHHHHHHHTGGGGGGTTTCGGGH-HHHHHHHHHHHHH
T ss_pred HHHHHHHhcccchhheeEe-CCCCEEEEeCCCc--------chhhccCHHHHhhhHHHhccCHHHH-HHHHHHHHHHHHH
Confidence 3445566654333344666 6777788888632 67999998 444444777888877 7777888899998
Q ss_pred cccccCCCCCCCCCCcceeeeccCCCCCCCccceecCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhhhHH
Q 006131 264 KTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQT 343 (660)
Q Consensus 264 ~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~~q~ 343 (660)
...|+|.-.--.-|++- -|. .| .++....-+.+==-+||--.+|-+++.|++.|||.+|... +...
T Consensus 98 i~~dPYaNAF~~~~~~~--~~~----~d-------~t~~~~~v~ErKyElDSL~~~l~La~~y~~~Tgd~~~f~~-~w~~ 163 (427)
T 3qt9_A 98 IFIDPYANAFNKEPNGQ--KWD----ND-------ITKDSPWVWERKYEIDSLCYPVRLIHKYWKESGDETFFNY-DIKK 163 (427)
T ss_dssp HHHCTTCSEECSSSCCC--CSS----CC-------BSCCCTTEEECCCCTHHHHHHHHHHHHHHHHHCCCTTCCH-HHHH
T ss_pred hccCcccccCCCCCCCc--CcC----CC-------CCCCCCceEeeccHHhhhHHHHHHHHHHHHhhCChhhhhH-HHHH
Confidence 88888852110011110 000 00 0111111122334599999999999999999999998875 5789
Q ss_pred HHHHHHHHHHhCC---------CCC-----CCcee-------e-cCCCccccc----cccccCcccchhHHHHHHHHHHH
Q 006131 344 GIRLILNLCLTDG---------FDM-----FPSLL-------V-TDGSCMIDR----RMGIHGHPLEIQSLFYSALRCSR 397 (660)
Q Consensus 344 ~I~~IL~w~l~dg---------Fd~-----~p~Ll-------v-~dGs~w~D~----rm~r~G~PlEVQALwY~ALr~aa 397 (660)
+++.||+-+..+. |.. .++|. | +-|..|--= ..-++||.+--|++..-||+.++
T Consensus 164 a~~~il~~~~~~q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~~~~~iPsN~~a~vaL~~~a 243 (427)
T 3qt9_A 164 AFNMIIDLWRVEQYHREKSDYSFQRLNCSVTDTLSHEGLGTPVTYTGMTWSGFRPSDDACEYGYLIPANMFAVVALRYIS 243 (427)
T ss_dssp HHHHHHHHHHHGGGHHHHCCCCCBCSSSCGGGSCHHHHTCSCCCCCSSCCCSBCTTSCBCSSSEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCCceEeccCCCCCccccCCCCCCCcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHHHH
Confidence 9999998875521 210 01111 0 123333211 13577899999999999999999
Q ss_pred HHHhhcCCChHHHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCcee
Q 006131 398 EMLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLI 477 (660)
Q Consensus 398 eL~~~~~g~~~~a~~l~~ra~aL~~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~ 477 (660)
+|+....++.++++++.+.+.++++.|.+|..++..+.-.||.|....|| ++++
T Consensus 244 ei~~~l~~d~~La~~~~~la~eIr~aI~k~gvv~~p~~G~iyAyEVDG~G--------------------------s~~l 297 (427)
T 3qt9_A 244 EIAEKVYKDEELKEKADSLREEIDNAIEKHGKVYKEGFGEVYAYETDGMG--------------------------NYNF 297 (427)
T ss_dssp HHHHHTSCCHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSSS--------------------------CEEC
T ss_pred HHHHHhccCHHHHHHHHHHHHHHHHHHHHhcEecCCCcceEEEEEeccCC--------------------------Cccc
Confidence 99987667788888888888889999999988776554455555444333 2221
Q ss_pred eccCCCCccccccccchhHHH-HhcCCC--HHHHHHHHHHHHhhhhhhhcCCCccccCCCCC-CCcccCCCCchhhHHHH
Q 006131 478 GNLEPGHMDFRFFTLGNLWAI-VSSLGT--ARQNEGILNLIEAKWDDLVAHMPLKICYPALD-PWSYHNGGSWPTLLWQF 553 (660)
Q Consensus 478 g~v~P~~~d~Rf~slGN~LAi-lsgLl~--~eqa~~Il~~I~~~w~dL~t~~gLRtl~Pa~~-P~SYHNGgVWP~LLw~~ 553 (660)
||. -..+.+|++ .+|.++ .+.-+.-.+.|+++ . .|+=.+- ++.+ -.+-|.|.-.||.+..+
T Consensus 298 -------MDD--aNvPSLLslPylGf~~~dDpiYqNTrk~IlS~---~-NPyy~~G--~~~~GIG~PH~~~~~~Wpmsl~ 362 (427)
T 3qt9_A 298 -------MDD--ANVPSLLSIPYLEYKGIEDEVYQNTRKFILSK---N-NRFFFEG--KAAKGIGSPHTPDQYIWHIALS 362 (427)
T ss_dssp -------CCC--SSSSCSTTHHHHTSSCTTCHHHHHHHHHHTST---T-STTEEEC--SSCEEECCTTSCTTEEEHHHHH
T ss_pred -------cCC--CCchhHHHHHHcCCCCCCCHHHHHHHHHHhcc---c-CCceecc--CccCcCCCCCCCCCCchHHHHH
Confidence 220 123445666 356543 34444455666442 2 3331110 1111 46667776444444444
Q ss_pred HHHHHHcCCcHHHHHHHHHHHhH-hcCCCcCccccCCCCCCCCCCCchhhhhhHHHHH
Q 006131 554 TLACIKMGRPELAQKAVAMAEKR-LSVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYL 610 (660)
Q Consensus 554 ~lA~lK~Gr~~~A~r~L~~a~~~-L~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L 610 (660)
..+ +..+..+++++.|..+.+. ...+-+.|=||-+++... .|...||+=+.|-
T Consensus 363 ~~~-lTs~d~~Ei~~~L~~l~~t~~gtGlmHEsvd~~~~~~~---TR~WFaWaN~lF~ 416 (427)
T 3qt9_A 363 MQG-LTTNNQEEIDQLIKLLKETDAGTGYMHEGFHVDDPTKF---TRDWFAWSNSLFS 416 (427)
T ss_dssp HHH-HTCCCHHHHHHHHHHHHHTSTTSSSCCSEEETTEEEEE---SCSCBHHHHHHHH
T ss_pred HHH-hhcCCHHHHHHHHHHHHhcCCCCCeeeeeECCCCCCcc---CCCcchhhhHHHH
Confidence 333 3467788888888877554 456889999999985444 4459999988754
No 18
>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125}
Probab=95.87 E-value=0.06 Score=62.78 Aligned_cols=100 Identities=17% Similarity=0.124 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHHhCcHhHHHhhhhHHHHHHHHHHHHhCC-CCCCCceeecCCCcccccc--cc-----ccCcccchhH
Q 006131 316 GLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLTDG-FDMFPSLLVTDGSCMIDRR--MG-----IHGHPLEIQS 387 (660)
Q Consensus 316 tLWfIIal~~Y~k~TGD~~f~~~~~~q~~I~~IL~w~l~dg-Fd~~p~Llv~dGs~w~D~r--m~-----r~G~PlEVQA 387 (660)
+.|...++++|++.|||.+|+++. ..+.|+.+.+++.+-. ++. ..-++..+++.=|.. .| ..--+.+.|+
T Consensus 450 ~awla~~lw~yy~~TgD~~fL~~~-~~p~l~e~A~F~~~~l~~~~-~g~y~i~p~~sPE~~~~~~g~~~~~~~n~tytn~ 527 (803)
T 2rdy_A 450 GVWLTQHLWEHYTFGEDEAYLRDT-AYPIMKEAALFCLDWLIENE-AGYLVTSPSTSPEQRFRIGEKGYAVSSATTMDLS 527 (803)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHT-HHHHHHHHHHHHHHHCEECT-TSCEECSSBCBTTBCEEETTEEECCBSCCHHHHH
T ss_pred HHHHHHHHHHHHHhhCCHHHHHhh-chHHHHHHHHHHHHhhEECC-CCcEEECCCCcccccccCCCcccccccChHHHHH
Confidence 568889999999999999999862 5899999999886621 222 122222222211110 00 1112579999
Q ss_pred HHHHHHHHHHHHHhhcCCChHHHHHHHHHH
Q 006131 388 LFYSALRCSREMLIVNDGTKNLVAAINNRL 417 (660)
Q Consensus 388 LwY~ALr~aaeL~~~~~g~~~~a~~l~~ra 417 (660)
++...|+.+.++++.++-+.++.+++.+.+
T Consensus 528 ~~~~~l~~a~~a~~~Lg~~~~~~~~w~~~~ 557 (803)
T 2rdy_A 528 LIAECFDNCIQAAKRLSIDEDFVKALSDAK 557 (803)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCcCHHHHHHHHHHH
Confidence 999999999999887655555554444433
No 19
>1h54_A Maltose phosphorylase; hydrolase, maltose metabolism; 2.15A {Lactobacillus brevis} SCOP: a.102.1.4 b.30.5.3
Probab=94.97 E-value=0.73 Score=53.42 Aligned_cols=79 Identities=16% Similarity=0.087 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHhCcHhHHHhhhhHHHHHHHHHHHHhC-CCCCCCceeecCCCcccccccccc------CcccchhHH
Q 006131 316 GLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLTD-GFDMFPSLLVTDGSCMIDRRMGIH------GHPLEIQSL 388 (660)
Q Consensus 316 tLWfIIal~~Y~k~TGD~~f~~~~~~q~~I~~IL~w~l~d-gFd~~p~Llv~dGs~w~D~rm~r~------G~PlEVQAL 388 (660)
+.|...++++|++.|||.+|+++- ..+-|+.+-++..+- .++... |...+...|+-. -.+.++|++
T Consensus 429 ~a~ia~a~~~yy~~T~D~~fL~~~-g~~~l~e~A~Fw~s~~~~~~~~------g~y~i~~VtgPdEy~e~v~nn~ytn~~ 501 (754)
T 1h54_A 429 NGDIAFAIYNYTRYTGDDSYVLHE-GAKVLTEISRFWADRVHFSKRN------NQYMIHGVTGADEYENNVDNNWDTNML 501 (754)
T ss_dssp HHHHHHHHHHHHHHHCCCTTTTTH-HHHHHHHHHHHHHHHCEEETTT------TEEECCSBCCSSTTSCSBSCCHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCHHHHHhC-ChHHHHHHHHHHHHheEEeCCC------CEEEEccccCcccccCCCCCcHHHHHH
Confidence 578888999999999999999752 577888888876551 122111 111111111111 124689999
Q ss_pred HHHHHHHHHHHHh
Q 006131 389 FYSALRCSREMLI 401 (660)
Q Consensus 389 wY~ALr~aaeL~~ 401 (660)
....|+.+.++++
T Consensus 502 a~~~l~~a~~~~~ 514 (754)
T 1h54_A 502 AQWTLKYTLEILG 514 (754)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999873
No 20
>2eab_A Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifidobacterium bifidum} PDB: 2eac_A* 2ead_A* 2eae_A*
Probab=94.27 E-value=0.44 Score=56.39 Aligned_cols=82 Identities=17% Similarity=0.041 Sum_probs=53.3
Q ss_pred cHHHHHHHHHHHHHHhCcHhHHHhhhhHHHHHHHHHHHHh-CC-CCCC--CceeecCCCccccccccccC-----cccch
Q 006131 315 SGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLT-DG-FDMF--PSLLVTDGSCMIDRRMGIHG-----HPLEI 385 (660)
Q Consensus 315 AtLWfIIal~~Y~k~TGD~~f~~~~~~q~~I~~IL~w~l~-dg-Fd~~--p~Llv~dGs~w~D~rm~r~G-----~PlEV 385 (660)
.+.|....+++|++.|||.+|++. ..|.|+.+.+++++ -- ++.. ..-++...++ -|-++ -+-..
T Consensus 507 ~~aWla~~lweyy~yTgD~~fL~~--~yPlLkeaA~F~~d~~l~~~~~~~~G~~vi~ps~-----SPE~~~~~~~~~tyd 579 (899)
T 2eab_A 507 AVPWILQNVYEAYEYSGDPALLDR--VYALLKEESHFYVNYMLHKAGSSSGDRLTTGVAY-----SPEQGPLGTDGNTYE 579 (899)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHH--HHHHHHHHHHHHHHHTCEECCGGGCSSEECSEEE-----ETTEEEEEEECCHHH
T ss_pred hHHHHHHHHHHHHHhhCCHHHHHH--HHHHHHHHHHHHHhhheEecCcCCCCeEEEcccc-----CCCCCCCCCCCcHHH
Confidence 356888899999999999999943 79999999999876 31 2221 1111111110 01111 13578
Q ss_pred hHHHHHHHHHHHHHHhhc
Q 006131 386 QSLFYSALRCSREMLIVN 403 (660)
Q Consensus 386 QALwY~ALr~aaeL~~~~ 403 (660)
|++....|+.+.+.++.+
T Consensus 580 n~l~~~ll~~~i~aa~~L 597 (899)
T 2eab_A 580 SSLVWQMLNDAIEAAKAK 597 (899)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 888888888888777654
No 21
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=39.83 E-value=3.6e+02 Score=31.05 Aligned_cols=131 Identities=14% Similarity=-0.003 Sum_probs=76.8
Q ss_pred ccchHHHHHHHHHHHhhccccCccceeEeecCCCCCCCCCCCCCcccchHHHHHHHHhcCCh------HHHHHHHHHHhh
Q 006131 185 EASNIEKEAWKLLRDAVVNYCGNPVGTVAANNPADKQPLNYDQVFIRDFVPSALAFLLNGEG------DIVKNFLLHTLQ 258 (660)
Q Consensus 185 ~~~~~~~~A~~lLr~~~v~~~~~p~GtlAA~~p~~~~~~nY~~vFgRD~vISal~~L~~G~p------eiar~~L~tla~ 258 (660)
..++.++++++-|++.+.. .+.|...-+- |=.++| |+..++.++...|.+ +.++..+..+..
T Consensus 353 ~~~~~~~~~l~~l~~~l~~---~~dG~~~q~~-------~gs~vw--dTalal~AL~~ag~~~~~~~~~~l~ka~~~L~~ 420 (732)
T 1w6k_A 353 PASTAFQEHVSRIPDYLWM---GLDGMKMQGT-------NGSQIW--DTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRL 420 (732)
T ss_dssp TTSHHHHHHHHTSGGGEEE---ETTEEEECSS-------SCCHHH--HHHHHHHHHHHTTGGGCGGGHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhee---CCCCceeCCC-------CCCchH--HHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHH
Confidence 4567788888777775443 4667543221 112677 999999888766643 366777777777
Q ss_pred hcccccccc---cCCCCCCCCCCcceeeeccCCCCCCCccceecCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhH
Q 006131 259 LQSWEKTVD---CYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYAL 335 (660)
Q Consensus 259 lQ~~e~~ld---~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f 335 (660)
.|..+..-| .|+.. -|+.| .|.... ..+..+|.|-.-+.++..+.+..++.
T Consensus 421 ~Q~~~~~~d~~~~~r~~---~~GGW--------------------~f~~~~-~~~pd~d~TA~vl~aL~~~~~~~~~~-- 474 (732)
T 1w6k_A 421 SQVPDNPPDYQKYYRQM---RKGGF--------------------SFSTLD-CGWIVSDCTAEALKAVLLLQEKCPHV-- 474 (732)
T ss_dssp HSCCCCCTTGGGGTCCC---CTTCC--------------------BSSCTT-TCCBCHHHHHHHHHHHHHHHHHCTTC--
T ss_pred hcccccCCcccccccCC---CCCee--------------------cCCCCC-CCCCccccHHHHHHHHHHHhcccccc--
Confidence 675442100 12211 12221 011111 13568999999999999887765421
Q ss_pred HHhhhhHHHHHHHHHHHHh
Q 006131 336 QERVDVQTGIRLILNLCLT 354 (660)
Q Consensus 336 ~~~~~~q~~I~~IL~w~l~ 354 (660)
. .......++.+++|+++
T Consensus 475 g-~~~~~~~i~~av~wLls 492 (732)
T 1w6k_A 475 T-EHIPRERLCDAVAVLLN 492 (732)
T ss_dssp C-SCCCHHHHHHHHHHHHT
T ss_pred c-chhhHHHHHHHHHHHHH
Confidence 0 11235677888999976
No 22
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=38.56 E-value=3.3e+02 Score=27.64 Aligned_cols=20 Identities=10% Similarity=-0.044 Sum_probs=14.9
Q ss_pred hhhhhHHHHHHHHHHhcCCC
Q 006131 601 HQTWTIAGYLTSKMLLENPA 620 (660)
Q Consensus 601 ~QAWSaA~~L~a~~lL~~P~ 620 (660)
+|||++.+++.++....++.
T Consensus 305 ~qae~i~a~~~ly~~tgd~~ 324 (388)
T 2gz6_A 305 VHLESLVALAMGYRLTGRDA 324 (388)
T ss_dssp HHHHHHHHHHHHHHHHCCHH
T ss_pred HHHHHHHHHHHHHHHhCCHH
Confidence 58999999888876555544
No 23
>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A
Probab=34.64 E-value=31 Score=27.40 Aligned_cols=28 Identities=14% Similarity=0.222 Sum_probs=25.2
Q ss_pred cccchHHHHHHHHhcCChHHHHHHHHHHh
Q 006131 229 FIRDFVPSALAFLLNGEGDIVKNFLLHTL 257 (660)
Q Consensus 229 FgRD~vISal~~L~~G~peiar~~L~tla 257 (660)
|.|+.+|-||. ...|+-|+|.++|+.++
T Consensus 23 Fsr~~ai~AL~-~a~nnve~AaniLlef~ 50 (52)
T 2ooa_A 23 YAFEEVKRALE-IAQNNVEVARSILREFA 50 (52)
T ss_dssp CCHHHHHHHHH-HTTTCHHHHHHHHHHHC
T ss_pred CCHHHHHHHHH-HhCCCHHHHHHHHHHhc
Confidence 77999999998 77899999999999875
No 24
>2d9s_A CBL E3 ubiquitin protein ligase; UBA domain, dimer, protein binding, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=34.31 E-value=33 Score=27.29 Aligned_cols=28 Identities=18% Similarity=0.218 Sum_probs=25.6
Q ss_pred cccchHHHHHHHHhcCChHHHHHHHHHHh
Q 006131 229 FIRDFVPSALAFLLNGEGDIVKNFLLHTL 257 (660)
Q Consensus 229 FgRD~vISal~~L~~G~peiar~~L~tla 257 (660)
|.|+-+|-||. ...|+.|++.++|+.++
T Consensus 21 F~r~~ai~AL~-~a~nnve~Aa~iL~ef~ 48 (53)
T 2d9s_A 21 YSYQDIQKALV-IAHNNIEMAKNILREFS 48 (53)
T ss_dssp CCHHHHHHHHH-HTTTCHHHHHHHHHHHT
T ss_pred CCHHHHHHHHH-HhcCCHHHHHHHHHHhc
Confidence 77999999997 77899999999999987
No 25
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=32.33 E-value=4.3e+02 Score=27.10 Aligned_cols=45 Identities=16% Similarity=0.417 Sum_probs=27.5
Q ss_pred chhh--HHHHHHHHHHcCCc---HHHHHHHHHHHhHhcCCCcCccccCCC
Q 006131 546 WPTL--LWQFTLACIKMGRP---ELAQKAVAMAEKRLSVDQWPEYYDTQS 590 (660)
Q Consensus 546 WP~L--Lw~~~lA~lK~Gr~---~~A~r~L~~a~~~L~~~~~pE~FDG~t 590 (660)
||.- +..+..++..+|.. +.|.++..-+..++.+..=.+||+..+
T Consensus 314 W~qaea~~a~l~ly~~tgd~~yl~~a~~~~~~~~~~f~D~~~G~w~~~~~ 363 (402)
T 1fp3_A 314 WPHSEAMIAFLMGYSESGDPALLRLFYQVAEYTFRQFRDPEYGEWFGYLN 363 (402)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCTTTSSBCCEEC
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcCCCCCceEeeEC
Confidence 7775 55555555556775 456666666677886534456776443
No 26
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=32.20 E-value=4.2e+02 Score=26.89 Aligned_cols=26 Identities=12% Similarity=0.161 Sum_probs=20.9
Q ss_pred CCcHHHHHHHHHHHHHHhCcHhHHHh
Q 006131 313 VDSGLWWIILLRAYGKITGDYALQER 338 (660)
Q Consensus 313 VDAtLWfIIal~~Y~k~TGD~~f~~~ 338 (660)
.+.--++|.++.++++.|||...++.
T Consensus 114 ~~~~af~i~al~~~y~~tg~~~~l~~ 139 (388)
T 2gz6_A 114 IFSDCFAAMAFSQYALASGEEWAKDV 139 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 44566789999999999999877654
No 27
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=24.91 E-value=5.9e+02 Score=26.26 Aligned_cols=17 Identities=18% Similarity=0.059 Sum_probs=13.7
Q ss_pred chhHHHHHHHHHHHHHH
Q 006131 384 EIQSLFYSALRCSREML 400 (660)
Q Consensus 384 EVQALwY~ALr~aaeL~ 400 (660)
..|++++.+|-.+.++.
T Consensus 41 w~~G~~~~gl~~~y~~t 57 (373)
T 1nc5_A 41 YHQGVFLCGVLRLWEAT 57 (373)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHh
Confidence 46999999988877765
Done!