Your job contains 1 sequence.
>006140
MPEMSAFLEMEDLQEELLTSPSHTSSSSSYSSPPNLYPFSIDAELWLLAEERIQEILCTI
QPAIVSEKKRKEVINYIQRLINGYYGIEVFPFGSVPLKTYLPDGDIDLTVLGHQNVEEDL
ARFVCKILENEDQDSVFEIKDVQYVPAQVKIVKCSVQNIPVDISFNQMAGLSALCFLEKV
DRLIGKDHLFKRSVILIKAWCYYESRILGAHYGLISTYALEMMVLHRFLDYYNTFDWDNY
CISINGPVAISSLPEIVAETVENDGDELLLSPEFLKKCREIYSVPITALENTGHEFAIKH
LNIVDPLKDNNNLGRSVSKGNFHRIRCALSYGAQRLGEILTLPGHCLGMGLEKFFINTLE
RNGKGLRPDVQVPIHAFGSGKSEAADLSGDYDSYYNGLLYGQCYHDYTLPVTAQFSPPSS
PSQIPSRSAWDVLCQYVQGKGNLVYQWGTEVFVPRLPFCHPYASQVRASTFSTDEGEKSR
GTGTYIPERTRPPPIEINRPVRARNPESLNHVPVSKLRRKIDKAERLPSRDNLESGCSLN
VENGCSLNMENSCSLILSLEEFPLLPVTKNLPPSATNQQFDQSTDKSTQVDDVSSPVVTT
IMFGTYEHSLKPSVLPSPSARMKVSGASTTLDTEPGLTIMERQKQQEPSGSRDELYGIF
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006140
(659 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2078426 - symbol:AT3G56320 species:3702 "Arabi... 1108 2.9e-112 1
TAIR|locus:2061868 - symbol:AT2G40520 "AT2G40520" species... 936 4.8e-94 1
TAIR|locus:2081885 - symbol:AT3G51620 "AT3G51620" species... 601 4.7e-68 2
TAIR|locus:2076795 - symbol:AT3G61690 species:3702 "Arabi... 572 2.7e-56 2
CGD|CAL0005626 - symbol:orf19.429 species:5476 "Candida a... 133 3.3e-05 1
UNIPROTKB|I3LUY3 - symbol:PAPD5 "Uncharacterized protein"... 131 4.1e-05 1
UNIPROTKB|H3BQM0 - symbol:PAPD5 "PAP-associated domain-co... 131 5.0e-05 2
UNIPROTKB|Q8NDF8 - symbol:PAPD5 "PAP-associated domain-co... 131 5.0e-05 1
UNIPROTKB|J9PAB7 - symbol:PAPD5 "Uncharacterized protein"... 131 5.2e-05 2
UNIPROTKB|J9P5I2 - symbol:PAPD5 "Uncharacterized protein"... 131 5.5e-05 1
UNIPROTKB|E9PC61 - symbol:PAPD5 "PAP-associated domain-co... 131 5.6e-05 1
UNIPROTKB|F1PHH1 - symbol:PAPD5 "Uncharacterized protein"... 131 6.3e-05 1
UNIPROTKB|B4DV38 - symbol:PAPD5 "PAP-associated domain-co... 131 6.6e-05 1
UNIPROTKB|J9P9B2 - symbol:PAPD5 "Uncharacterized protein"... 131 6.8e-05 1
POMBASE|SPAC12G12.13c - symbol:cid14 "poly(A) polymerase ... 128 0.00014 1
RGD|1309587 - symbol:Papd5 "PAP associated domain contain... 126 0.00017 2
MGI|MGI:1917820 - symbol:Papd5 "PAP associated domain con... 126 0.00020 1
WB|WBGene00014115 - symbol:gld-4 species:6239 "Caenorhabd... 135 0.00031 2
ZFIN|ZDB-GENE-041021-1 - symbol:papd7 "PAP associated dom... 125 0.00033 1
UNIPROTKB|F1NJM3 - symbol:PAPD7 "Uncharacterized protein"... 120 0.00040 1
UNIPROTKB|E1BX86 - symbol:PAPD7 "Uncharacterized protein"... 120 0.00050 1
DICTYBASE|DDB_G0295737 - symbol:DDB_G0295737 "PAP/25A-ass... 124 0.00055 1
SGD|S000005243 - symbol:TRF5 "Non-canonical poly(A) polym... 120 0.00092 1
>TAIR|locus:2078426 [details] [associations]
symbol:AT3G56320 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA;ISS]
InterPro:IPR002934 Pfam:PF01909 EMBL:CP002686 GO:GO:0016779
HOGENOM:HOG000084944 ProtClustDB:CLSN2680151 EMBL:BT008327
EMBL:AK228086 IPI:IPI00522650 RefSeq:NP_191191.2 UniGene:At.23883
UniGene:At.71191 ProteinModelPortal:Q7Y227 IntAct:Q7Y227
PaxDb:Q7Y227 PRIDE:Q7Y227 EnsemblPlants:AT3G56320.1 GeneID:824799
KEGG:ath:AT3G56320 TAIR:At3g56320 eggNOG:NOG311156
InParanoid:Q7Y227 OMA:ERESEFH PhylomeDB:Q7Y227
Genevestigator:Q7Y227 Uniprot:Q7Y227
Length = 603
Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
Identities = 251/566 (44%), Positives = 332/566 (58%)
Query: 10 MEDLQEELLTXXXXXXXXXXXXXXXNLYP---FSIDAELWLLAEERIQEILCTIQPAIVS 66
M ++QE L L IDA+ W++AEER EILCTIQPA+VS
Sbjct: 1 MGEIQERLSVSSSSSSSSSSLSLSTALPKGDSLPIDADSWMIAEERAHEILCTIQPALVS 60
Query: 67 EKKRKEVINYIQRLINGYYGIEVFPFGSVPLKTYLPDGDIDLTVLGHQNVEEDLARFVCK 126
++ R E+I+Y++ LI + GIEVF FGSVPLKTYLPDGDIDLTVL QN+++D +C
Sbjct: 61 DRSRNEIIDYVRTLIMSHEGIEVFSFGSVPLKTYLPDGDIDLTVLTKQNMDDDFYGQLCS 120
Query: 127 ILENEDQDSVFEIKDVQYVPAQVKIVKCSVQNIPVDISFNQMAGLSALCFLEKVDRLIGK 186
L+NE+++S F DVQ++PAQVK++KC+++NI VDISFNQ AGL ALCFLE+VD+L G+
Sbjct: 121 RLQNEERESEFHATDVQFIPAQVKVIKCNIRNIAVDISFNQTAGLCALCFLEQVDQLFGR 180
Query: 187 DHLFKRSVILIKAWCYYESRILGAHYGLISTYALEMMVL------HRFLD-----YYNTF 235
DHLFKRS+IL+KAWCYYESRILGA+ GLISTYAL ++VL H L Y
Sbjct: 181 DHLFKRSIILVKAWCYYESRILGANTGLISTYALAVLVLYIINLFHSSLSGPLAVLYKFL 240
Query: 236 DWDNYCISINGPVAISSLPEIVAETVE------NDGDELLLSPEFLKKCREIYSVPITAL 289
D+ N ++++ P ++ E +G ELLL +FL+ C E+YS P A+
Sbjct: 241 DYYGSFDWNNYCISVNG-PVPISSLPELTAASPENGHELLLDEKFLRNCVELYSAPTKAV 299
Query: 290 ENTGHEFAIKHLNIVDPLKDNNNLGRSVSKGNFHRIRCALSYGAQRLGEILTLPGHCLGM 349
++ G EF IKHLNIVDPLK +NNLG+SV++GN RIR A + GA++L ++L+LPG +G
Sbjct: 300 DSNGLEFPIKHLNIVDPLKYSNNLGKSVTQGNVQRIRHAFTLGARKLRDVLSLPGDTMGW 359
Query: 350 GLEKFFINTLERNGKGLRPDVQVPIHAFGSGKSEAADLSGDYDSYYNGLLYGQCYHDYTL 409
LEKFF N+LERNGKG R DV P+ AFG+G+SE ++LSGD+DS + L+YGQ YH ++L
Sbjct: 360 RLEKFFRNSLERNGKGQRQDVNDPVTAFGTGRSELSELSGDFDSSFGRLVYGQMYHGHSL 419
Query: 410 PVTAQFXXXXXXXXXXXXXAWDVLCQYVQGKGNLVYQWGTEVFVPRLPFCHPYASQVRAS 469
P T Q WD++ V + N + V PF P S
Sbjct: 420 PGTFQHGYIPVSSHLS---GWDIVRHLVTYRKNEFHLRSLNVSTSMQPF--PLHSLPNGC 474
Query: 470 TFSTDEGEKSRGTGTYXXXXXXXXXXXXXXXVRARNPESLNHVPVSKLRRKIDKAERLPS 529
K+RGTGTY S NH+ S ID
Sbjct: 475 ----QNMRKTRGTGTYIPDMSQQVYSDRFRE-SGTGTSSTNHLEASS--EAIDN------ 521
Query: 530 RDNLESGCSLN--VENGCSLNMENSC 553
D S C+L+ V C+ N C
Sbjct: 522 -DGASSCCNLSGEVSTSCTSNKGEEC 546
>TAIR|locus:2061868 [details] [associations]
symbol:AT2G40520 "AT2G40520" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA;ISS]
InterPro:IPR002934 Pfam:PF01909 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016779 EMBL:AY924760
IPI:IPI00525074 RefSeq:NP_001078031.1 RefSeq:NP_001118485.1
RefSeq:NP_001118486.1 RefSeq:NP_850331.1 UniGene:At.37036
UniGene:At.68912 ProteinModelPortal:Q5BPR8 PRIDE:Q5BPR8
EnsemblPlants:AT2G40520.1 EnsemblPlants:AT2G40520.2
EnsemblPlants:AT2G40520.3 EnsemblPlants:AT2G40520.4 GeneID:818647
KEGG:ath:AT2G40520 TAIR:At2g40520 HOGENOM:HOG000084944
InParanoid:Q5BPR8 OMA:EKFFREC PhylomeDB:Q5BPR8
ProtClustDB:CLSN2680151 Genevestigator:Q5BPR8 Uniprot:Q5BPR8
Length = 502
Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
Identities = 190/382 (49%), Positives = 264/382 (69%)
Query: 41 IDAELWLLAEERIQEILCTIQPAIVSEKKRKEVINYIQRLINGYYGIEVFPFGSVPLKTY 100
I+AE+WL+AE R QEILC IQP ++E+ R ++I+ +Q L+ GIEV+ FGS+PLKTY
Sbjct: 28 IEAEVWLIAEARAQEILCAIQPNYLAERSRNKIISNLQTLLWERLGIEVYLFGSMPLKTY 87
Query: 101 LPDGDIDLTVLGHQNVEEDLARFVCKILENEDQDSVFEIKDVQYVPAQVKIVKCSVQNIP 160
LPDGDIDLTVL H EED AR VC +LE E +S ++ VQYV A+VK++KCS++++
Sbjct: 88 LPDGDIDLTVLTHHASEEDCARAVCCVLEAEMGNSDLQVTGVQYVQAKVKVIKCSIRDVA 147
Query: 161 VDISFNQMAGLSALCFLEKVDRLIGKDHLFKRSVILIKAWCYYESRILGAHYGLISTYAL 220
DISFNQ+AGL ALCFLE+VD+ G+DHLFK+S+IL+KAWC+YESRILGA+ GLISTYAL
Sbjct: 148 FDISFNQLAGLGALCFLEQVDKAFGRDHLFKKSIILVKAWCFYESRILGANSGLISTYAL 207
Query: 221 EMMVLHRFLDYYNT--------FDWDNYCISI---NGPVAISS-LP-EIVAETVENDGDE 267
++VL+ Y++ + + NY S N V ++ +P + + E E
Sbjct: 208 AILVLNIVNMSYSSLSGPLAVLYKFINYYGSFDWKNYCVTVTGPVPISSLPDITETGNHE 267
Query: 268 LLLSPEFLKKCREIYSVPITALENTGHEFAIKHLNIVDPLKDNNNLGRSVSKGNFHRIRC 327
+ L +F ++C E+YS +E + F +K+ NI+DPLK +NNLGRSV+KGN R+R
Sbjct: 268 VFLDEKFFRECMELYSGETGVVEASRKYFPVKYYNILDPLKHSNNLGRSVTKGNMVRLRN 327
Query: 328 ALSYGAQRLGEILTLPGHCLGMGLEKFFINTLERNGKGLRPDVQVPIHAFGSGKSEAADL 387
G Q+L ++LTLPG +G LEKFF +LERNGKG R DV+ P+ AFG+G ++ + L
Sbjct: 328 CFMLGVQKLRDVLTLPGENVGWKLEKFFNVSLERNGKGQRQDVEEPVVAFGTGAADYSQL 387
Query: 388 SGDYDSYYNGLLYGQCYHDYTL 409
GD+D Y N L+YG+ +H +L
Sbjct: 388 KGDFDRYRNNLIYGKWFHGESL 409
>TAIR|locus:2081885 [details] [associations]
symbol:AT3G51620 "AT3G51620" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 GO:GO:0016740 IPI:IPI00542850
RefSeq:NP_850678.2 UniGene:At.660 ProteinModelPortal:F4J4G2
PRIDE:F4J4G2 EnsemblPlants:AT3G51620.2 GeneID:824325
KEGG:ath:AT3G51620 OMA:VETPENG PhylomeDB:F4J4G2 Uniprot:F4J4G2
Length = 829
Score = 601 (216.6 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 123/209 (58%), Positives = 154/209 (73%)
Query: 44 ELWLLAEERIQEILCTIQPAIVSEKKRKEVINYIQRLINGYYGIEVFPFGSVPLKTYLPD 103
ELW+ EE +EI+ + P +VSE +R++VI Y+Q+LI G EV FGSVPLKTYLPD
Sbjct: 32 ELWMRVEEATREIIEQVHPTLVSEDRRRDVILYVQKLIRMTLGCEVHSFGSVPLKTYLPD 91
Query: 104 GDIDLTVLGHQNVEEDLARFVCKILENEDQD--SVFEIKDVQYVPAQVKIVKCSVQNIPV 161
GDIDLT G EE+LA V +LE E+ + S F +KDVQ + A+VK+VKC VQNI V
Sbjct: 92 GDIDLTAFGGLYHEEELAAKVFAVLEREEHNLSSQFVVKDVQLIRAEVKLVKCLVQNIVV 151
Query: 162 DISFNQMAGLSALCFLEKVDRLIGKDHLFKRSVILIKAWCYYESRILGAHYGLISTYALE 221
DISFNQ+ G+ LCFLEK+D LIGKDHLFKRS+ILIKAWCYYESRILGA +GLISTYALE
Sbjct: 152 DISFNQIGGICTLCFLEKIDHLIGKDHLFKRSIILIKAWCYYESRILGAFHGLISTYALE 211
Query: 222 MMVLHRFLDYYNTFDWDNYCISINGPVAI 250
+VL+ F +++ S+NGP+A+
Sbjct: 212 TLVLYIFHLFHS---------SLNGPLAV 231
Score = 477 (173.0 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
Identities = 99/200 (49%), Positives = 131/200 (65%)
Query: 171 LSALCFLEKVDRLIGKDHLFKRSVILIKAWCYYESRILGAHYGLISTYALEMMVLHRFLD 230
+ A C+ E R++G H LI + E+ +L + S+ + VL++FLD
Sbjct: 187 IKAWCYYES--RILGAFHG------LISTYAL-ETLVLYIFHLFHSSLNGPLAVLYKFLD 237
Query: 231 YYNTFDWDNYCISINGPVAISSLPEIVAETVENDGDELLLSPEFLKKCREIYSVPITALE 290
Y++ FDWD+YCIS+NGPV +SSLP+IV ET EN G++LLL+ EFLK+C E+YSVP E
Sbjct: 238 YFSKFDWDSYCISLNGPVCLSSLPDIVVETPENGGEDLLLTSEFLKECLEMYSVPSRGFE 297
Query: 291 NTGHEFAIKHLNIVDPLKDNNNLGRSVSKGNFHRIRCALSYGAQRLGEILTLPGHCLGMG 350
F KHLNIVDPLK+ NNLGRSVSKGNF+RIR A +YGA++LG++ +
Sbjct: 298 TNPRGFQSKHLNIVDPLKETNNLGRSVSKGNFYRIRSAFTYGARKLGQLFLQSDEAISSE 357
Query: 351 LEKFFINTLERNGKGLRPDV 370
L KFF N L R+G G RPDV
Sbjct: 358 LRKFFSNMLLRHGSGQRPDV 377
Score = 108 (43.1 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 30/111 (27%), Positives = 43/111 (38%)
Query: 375 HAFGSGKSEAADLSGDYDSYYNGLLYGQCYHDYTLPVTAQFXXXXXXXXXXXXXAWDVLC 434
H + +DLSGDY+S N L +G+ + DY +W+V+
Sbjct: 568 HCVSGTPNMLSDLSGDYESQLNSLRFGRWWFDYVQNGPMSPLSPPGLPQLPNNNSWEVMR 627
Query: 435 QYVQGKGNLVYQWGTEVFVPRLPFCHPYASQVRASTFSTDEGEKSRGTGTY 485
+ + N VPR F H + F +E K RGTGTY
Sbjct: 628 HALPFRRNAPTPVNANGVVPRQVFFHVNPQMIPGPGFGIEELPKPRGTGTY 678
>TAIR|locus:2076795 [details] [associations]
symbol:AT3G61690 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA]
InterPro:IPR002934 Pfam:PF01909 EMBL:CP002686 GO:GO:0016779
IPI:IPI00523694 RefSeq:NP_191728.2 UniGene:At.21960
ProteinModelPortal:F4JFF2 PRIDE:F4JFF2 EnsemblPlants:AT3G61690.1
GeneID:825342 KEGG:ath:AT3G61690 OMA:ESSWDGS Uniprot:F4JFF2
Length = 1303
Score = 572 (206.4 bits), Expect = 2.7e-56, Sum P(2) = 2.7e-56
Identities = 112/199 (56%), Positives = 150/199 (75%)
Query: 41 IDAELWLLAEERIQEILCTIQPAIVSEKKRKEVINYIQRLINGYYG-IEVFPFGSVPLKT 99
+DAE W AE+R +++ IQP SE +R V +Y++RLI + +++F FGSVPLKT
Sbjct: 34 LDAERWAKAEDRTAKLIACIQPNPPSEDRRNAVASYVRRLIMECFPQVQIFMFGSVPLKT 93
Query: 100 YLPDGDIDLTVLG-HQNVEEDLARFVCKILENED--QDSVFEIKDVQYVPAQVKIVKCSV 156
YLPDGDIDLT +QN+++ A V +LE E+ +++ F +K+VQY+ A+VKI+KC V
Sbjct: 94 YLPDGDIDLTAFSANQNLKDSWANLVRDMLEKEEKNENAEFHVKEVQYIQAEVKIIKCLV 153
Query: 157 QNIPVDISFNQMAGLSALCFLEKVDRLIGKDHLFKRSVILIKAWCYYESRILGAHYGLIS 216
+NI VDISFNQ+ GL LCFLE+VD I ++HLFKRS+ILIKAWCYYESRILGAH+GLIS
Sbjct: 154 ENIVVDISFNQIGGLCTLCFLEEVDHYINQNHLFKRSIILIKAWCYYESRILGAHHGLIS 213
Query: 217 TYALEMMVLHRFLDYYNTF 235
TYALE +VL+ F + N+F
Sbjct: 214 TYALETLVLYIFYLFNNSF 232
Score = 401 (146.2 bits), Expect = 2.5e-34, Sum P(2) = 2.5e-34
Identities = 83/199 (41%), Positives = 122/199 (61%)
Query: 171 LSALCFLEKVDRLIGKDHLFKRSVILIKAWCYYESRILGAHYGLISTYALEMMVLHRFLD 230
+ A C+ E R++G H LI + E+ +L Y ++++ + VL+RFL+
Sbjct: 194 IKAWCYYES--RILGAHHG------LISTYAL-ETLVLYIFYLFNNSFSGPLEVLYRFLE 244
Query: 231 YYNTFDWDNYCISINGPVAISSLPEIVAETVENDGDELLLSPEFLKKCREIYSVPITALE 290
+++ FDW N+C+S+ GPV +SSLP++ AE D EL +S F + C +Y+V I E
Sbjct: 245 FFSKFDWQNFCLSLWGPVPVSSLPDVTAEPPRRDVGELRVSEAFYRACSRVYAVNIAPQE 304
Query: 291 NTGHEFAIKHLNIVDPLKDNNNLGRSVSKGNFHRIRCALSYGAQRLGEILTLPGHCLGMG 350
G F KH N++DPL++NNNLGRSVSKGNF RIR A + GA++L +L P L
Sbjct: 305 IQGQPFVSKHFNVIDPLRENNNLGRSVSKGNFFRIRSAFTLGAKKLTRLLECPKENLIHE 364
Query: 351 LEKFFINTLERNGKGLRPD 369
+ +FF+NT ER+G G RPD
Sbjct: 365 VNQFFMNTWERHGSGRRPD 383
Score = 48 (22.0 bits), Expect = 2.7e-56, Sum P(2) = 2.7e-56
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 362 NGKGL-RPDVQVPIHAFGSGKS-EAAD-----LSGDYDSYYNGLLYGQ-CYHDYTLPV 411
+ +GL + ++ V H+ G S E + L+GD+ S++ L YG+ C + PV
Sbjct: 974 SSRGLDQSEIVVSSHSTRMGSSAEQVERKNDILNGDFISHWQNLQYGRSCQNSQHPPV 1031
>CGD|CAL0005626 [details] [associations]
symbol:orf19.429 species:5476 "Candida albicans" [GO:0031125
"rRNA 3'-end processing" evidence=IEA] [GO:0006284 "base-excision
repair" evidence=IEA] [GO:0071036 "nuclear
polyadenylation-dependent snoRNA catabolic process" evidence=IEA]
[GO:0071050 "snoRNA polyadenylation" evidence=IEA] [GO:0071035
"nuclear polyadenylation-dependent rRNA catabolic process"
evidence=IEA] [GO:0071039 "nuclear polyadenylation-dependent CUT
catabolic process" evidence=IEA] [GO:0071044 "histone mRNA
catabolic process" evidence=IEA] [GO:0071038 "nuclear
polyadenylation-dependent tRNA catabolic process" evidence=IEA]
[GO:0071042 "nuclear polyadenylation-dependent mRNA catabolic
process" evidence=IEA] [GO:0071037 "nuclear
polyadenylation-dependent snRNA catabolic process" evidence=IEA]
[GO:0071040 "nuclear polyadenylation-dependent antisense transcript
catabolic process" evidence=IEA] [GO:0007000 "nucleolus
organization" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA] [GO:0071051 "polyadenylation-dependent snoRNA 3'-end
processing" evidence=IEA] [GO:0071031 "nuclear mRNA surveillance of
mRNA 3'-end processing" evidence=IEA] [GO:0034475 "U4 snRNA 3'-end
processing" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0051575
"5'-deoxyribose-5-phosphate lyase activity" evidence=IEA]
[GO:0031499 "TRAMP complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 CGD:CAL0005626
Pfam:PF03828 eggNOG:COG5260 InterPro:IPR002058 KO:K03514
GO:GO:0016779 EMBL:AACQ01000078 EMBL:AACQ01000077
RefSeq:XP_715864.1 RefSeq:XP_715914.1 ProteinModelPortal:Q5A2B2
STRING:Q5A2B2 GeneID:3642450 GeneID:3642482 KEGG:cal:CaO19.429
KEGG:cal:CaO19.8059 Uniprot:Q5A2B2
Length = 603
Score = 133 (51.9 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 95/369 (25%), Positives = 147/369 (39%)
Query: 46 WLLAEERIQEILCTIQPAIVSEKKRKEVINYIQRLINGYY-GIEVFPFGSVPLKTYLPDG 104
WL E +++ + I P+ R VI+ +++ I ++ G E FGS YLP
Sbjct: 168 WLTLE--MKDFVNYISPSSEEIVTRNNVISTLKKEIGKFWPGTETHVFGSCATDLYLPGS 225
Query: 105 DIDLTVLGHQNVEEDLARF--VCKILENEDQDSVFEIKDVQYVPAQVKIVKCSVQNIPVD 162
DID+ V+ E+ +R + L + E+ VP +K V V + +D
Sbjct: 226 DIDMVVVSETGDYENRSRLYQLSTFLRTKKLAKNVEVIASAKVPI-IKFVD-PVSELHID 283
Query: 163 ISFNQMAGLSALCFLEKVDR-LIGKDHLFKRSVILIKAWCYYESRILGAHYGLISTYALE 221
+SF + GL A +++ R LI L + V++IK + R+ H G + YA
Sbjct: 284 VSFERTNGLDAA---KRIRRWLISTPGL-RELVLVIKQFLR-SRRLNNVHVGGLGGYATI 338
Query: 222 MMVLHRFLDYYNTFDWDNYCISINGPVAISSLPEIVAETVENDGDELLLS-----PEFLK 276
+M H FL + + N V + E+ D L L P + K
Sbjct: 339 IMCYH-FLRLHPKLSTSSMDALDNLGVLLIEFFELYGRNFSYDNLILSLDRDTEEPRYEK 397
Query: 277 KCREIYSVPITALENTGHEFAIKHLNIVDPLKDNNNLGRSVSKGNFHRIRCALSYGAQRL 336
K PI L + F+I I DP NN+ RS N ++ A Q L
Sbjct: 398 KGNH----PI--LNTARNTFSIV---IQDPADTTNNITRS--SYNLRDLKKAFGGAYQLL 446
Query: 337 GEI---LTLPGHCLGMGLEKFFINTLERNGK--GLRPDV-QVPIHAFGSGKSEAAD---- 386
E L + +G + + ++ NGK D +V HA S + E D
Sbjct: 447 VEKCYQLNAASYKQRLG-QSILGDIIKYNGKERDFNDDRHKVVNHALISHEEEIDDESDG 505
Query: 387 LSGDYDSYY 395
L G+ D YY
Sbjct: 506 LDGN-DKYY 513
>UNIPROTKB|I3LUY3 [details] [associations]
symbol:PAPD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828 InterPro:IPR002058
GO:GO:0016779 GeneTree:ENSGT00400000022055 OMA:TYGLNYS
Ensembl:ENSSSCT00000025469 Uniprot:I3LUY3
Length = 500
Score = 131 (51.2 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 74/270 (27%), Positives = 114/270 (42%)
Query: 51 ERIQEILCTIQPAIVSEKKRKEVINYIQRLINGYY-GIEVFPFGSVPLKTYLPDGDIDLT 109
E I + + P EK R EV+N I+ +I + +V FGS YLP DIDL
Sbjct: 3 EEISDFYEYMSPRPEEEKMRMEVVNRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDLV 62
Query: 110 VLGH-QNVEEDLARFVCKILENEDQDSVFEIKDVQYVPAQVKIVKCSVQNIPVDISFNQM 168
V G +N+ + + D+DSV ++ D VP +K+ S + VDISFN
Sbjct: 63 VFGKWENLPLWTLEEALRKHKVADEDSV-KVLDKATVPI-IKLTD-SFTEVKVDISFNVQ 119
Query: 169 AGLSALCFLEKVDRLIGKDHLFKRSVILIKAWCYYESRILGAHY-GLISTYALEMMVLHR 227
G+ A ++ + K + V+++K + R L + G I +Y+L +M +
Sbjct: 120 NGVRAADLIKDFTK---KYPVLPYLVLVLKQFLL--QRDLNEVFTGGIGSYSLFLMAVS- 173
Query: 228 FLDYYNTFDWDNYCISINGPVAISSLPEIVAETVENDGDEL-LLSPEFLKKCREIYSVPI 286
FL + D CI N + ++ E E G L K Y
Sbjct: 174 FLQLHPRED---ACIP-NTNYGV-----LLIEFFELYGRHFNYLKTGIRIKDGGSYVAKD 224
Query: 287 TALENTGHEFAIKHLNIVDPLKDNNNLGRS 316
+N + L I DPL+ N++GRS
Sbjct: 225 EVQKNMLDGYRPSMLYIEDPLQPGNDVGRS 254
>UNIPROTKB|H3BQM0 [details] [associations]
symbol:PAPD5 "PAP-associated domain-containing protein 5"
species:9606 "Homo sapiens" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 EMBL:AC007597 InterPro:IPR002058 GO:GO:0016779
EMBL:AC007610 HGNC:HGNC:30758 ProteinModelPortal:H3BQM0 SMR:H3BQM0
Ensembl:ENST00000561678 Bgee:H3BQM0 Uniprot:H3BQM0
Length = 588
Score = 131 (51.2 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 50/173 (28%), Positives = 80/173 (46%)
Query: 51 ERIQEILCTIQPAIVSEKKRKEVINYIQRLINGYY-GIEVFPFGSVPLKTYLPDGDIDLT 109
E I + + P EK R EV+N I+ +I + +V FGS YLP DIDL
Sbjct: 134 EEISDFYEYMSPRPEEEKMRMEVVNRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDLV 193
Query: 110 VLGH-QNVEEDLARFVCKILENEDQDSVFEIKDVQYVPAQVKIVKCSVQNIPVDISFNQM 168
V G +N+ + + D+DSV ++ D VP +K+ S + VDISFN
Sbjct: 194 VFGKWENLPLWTLEEALRKHKVADEDSV-KVLDKATVPI-IKLTD-SFTEVKVDISFNVQ 250
Query: 169 AGLSALCFLEKVDRLIGKDHLF----KRSVILIKAWCYYESRILGAHYGLIST 217
G+ A ++ +L ++ V+LI+ ++E + G H+ + T
Sbjct: 251 NGVRAADLIKDFTKLHPREDACIPNTNYGVLLIE---FFE--LYGRHFNYLKT 298
Score = 46 (21.3 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 301 LNIVDPLKDNNNLGRSVSKGNFHRIRCALSY 331
L I DPL+ N++GRS S G +++ A Y
Sbjct: 327 LYIEDPLQPGNDVGRS-SYGAM-QVKQAFDY 355
Score = 37 (18.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 243 SINGPVAISSLPEIVAETVENDGDELLLSPEFLKKCR 279
S +GPV+ SS + + V++D + L CR
Sbjct: 457 SSSGPVSSSSATQSSSSDVDSDATPCKTPKQLL--CR 491
>UNIPROTKB|Q8NDF8 [details] [associations]
symbol:PAPD5 "PAP-associated domain-containing protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0071044 "histone mRNA catabolic process"
evidence=IMP] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
GO:GO:0005634 GO:GO:0005737 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 GO:GO:0003677 GO:GO:0006260 GO:GO:0071044
GO:GO:0003887 eggNOG:COG5260 InterPro:IPR002058 EMBL:AK001141
EMBL:AK097589 EMBL:AF089897 EMBL:AL833922 IPI:IPI00383794
IPI:IPI00550722 IPI:IPI00940660 IPI:IPI01011361
RefSeq:NP_001035375.2 UniGene:Hs.514342 ProteinModelPortal:Q8NDF8
SMR:Q8NDF8 DIP:DIP-59183N IntAct:Q8NDF8 STRING:Q8NDF8
PhosphoSite:Q8NDF8 DMDM:59800139 PaxDb:Q8NDF8 PRIDE:Q8NDF8
GeneID:64282 KEGG:hsa:64282 CTD:64282 GeneCards:GC16P050186
HGNC:HGNC:30758 MIM:605540 neXtProt:NX_Q8NDF8 PharmGKB:PA134949693
HOGENOM:HOG000290646 HOVERGEN:HBG053489 GenomeRNAi:64282
NextBio:66196 CleanEx:HS_PAPD5 Genevestigator:Q8NDF8 Uniprot:Q8NDF8
Length = 572
Score = 131 (51.2 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 74/270 (27%), Positives = 114/270 (42%)
Query: 51 ERIQEILCTIQPAIVSEKKRKEVINYIQRLINGYY-GIEVFPFGSVPLKTYLPDGDIDLT 109
E I + + P EK R EV+N I+ +I + +V FGS YLP DIDL
Sbjct: 122 EEISDFYEYMSPRPEEEKMRMEVVNRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDLV 181
Query: 110 VLGH-QNVEEDLARFVCKILENEDQDSVFEIKDVQYVPAQVKIVKCSVQNIPVDISFNQM 168
V G +N+ + + D+DSV ++ D VP +K+ S + VDISFN
Sbjct: 182 VFGKWENLPLWTLEEALRKHKVADEDSV-KVLDKATVPI-IKLTD-SFTEVKVDISFNVQ 238
Query: 169 AGLSALCFLEKVDRLIGKDHLFKRSVILIKAWCYYESRILGAHY-GLISTYALEMMVLHR 227
G+ A ++ + K + V+++K + R L + G I +Y+L +M +
Sbjct: 239 NGVRAADLIKDFTK---KYPVLPYLVLVLKQFLL--QRDLNEVFTGGIGSYSLFLMAVS- 292
Query: 228 FLDYYNTFDWDNYCISINGPVAISSLPEIVAETVENDGDEL-LLSPEFLKKCREIYSVPI 286
FL + D CI N + ++ E E G L K Y
Sbjct: 293 FLQLHPRED---ACIP-NTNYGV-----LLIEFFELYGRHFNYLKTGIRIKDGGSYVAKD 343
Query: 287 TALENTGHEFAIKHLNIVDPLKDNNNLGRS 316
+N + L I DPL+ N++GRS
Sbjct: 344 EVQKNMLDGYRPSMLYIEDPLQPGNDVGRS 373
>UNIPROTKB|J9PAB7 [details] [associations]
symbol:PAPD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
InterPro:IPR002058 GO:GO:0016779 GeneTree:ENSGT00400000022055
EMBL:AAEX03001621 EMBL:AAEX03001622 EMBL:AAEX03001623
Ensembl:ENSCAFT00000049926 Uniprot:J9PAB7
Length = 598
Score = 131 (51.2 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 50/173 (28%), Positives = 80/173 (46%)
Query: 51 ERIQEILCTIQPAIVSEKKRKEVINYIQRLINGYY-GIEVFPFGSVPLKTYLPDGDIDLT 109
E I + + P EK R EV+N I+ +I + +V FGS YLP DIDL
Sbjct: 144 EEISDFYEYMSPRPEEEKMRMEVVNRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDLV 203
Query: 110 VLGH-QNVEEDLARFVCKILENEDQDSVFEIKDVQYVPAQVKIVKCSVQNIPVDISFNQM 168
V G +N+ + + D+DSV ++ D VP +K+ S + VDISFN
Sbjct: 204 VFGKWENLPLWTLEEALRKHKVADEDSV-KVLDKATVPI-IKLTD-SFTEVKVDISFNVQ 260
Query: 169 AGLSALCFLEKVDRLIGKDHLF----KRSVILIKAWCYYESRILGAHYGLIST 217
G+ A ++ +L ++ V+LI+ ++E + G H+ + T
Sbjct: 261 NGVRAADLIKDFTKLHPREDACIPNTNYGVLLIE---FFE--LYGRHFNYLKT 308
Score = 46 (21.3 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 301 LNIVDPLKDNNNLGRSVSKGNFHRIRCALSY 331
L I DPL+ N++GRS S G +++ A Y
Sbjct: 337 LYIEDPLQPGNDVGRS-SYGAM-QVKQAFDY 365
Score = 37 (18.1 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 243 SINGPVAISSLPEIVAETVENDGDELLLSPEFLKKCR 279
S +GPV+ SS + + V++D + L CR
Sbjct: 467 SSSGPVSSSSATQSSSSDVDSDATPCKTPKQLL--CR 501
>UNIPROTKB|J9P5I2 [details] [associations]
symbol:PAPD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
InterPro:IPR002058 GO:GO:0016779 GeneTree:ENSGT00400000022055
EMBL:AAEX03001621 EMBL:AAEX03001622 EMBL:AAEX03001623
Ensembl:ENSCAFT00000045316 Uniprot:J9P5I2
Length = 614
Score = 131 (51.2 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 74/270 (27%), Positives = 114/270 (42%)
Query: 51 ERIQEILCTIQPAIVSEKKRKEVINYIQRLINGYY-GIEVFPFGSVPLKTYLPDGDIDLT 109
E I + + P EK R EV+N I+ +I + +V FGS YLP DIDL
Sbjct: 190 EEISDFYEYMSPRPEEEKMRMEVVNRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDLV 249
Query: 110 VLGH-QNVEEDLARFVCKILENEDQDSVFEIKDVQYVPAQVKIVKCSVQNIPVDISFNQM 168
V G +N+ + + D+DSV ++ D VP +K+ S + VDISFN
Sbjct: 250 VFGKWENLPLWTLEEALRKHKVADEDSV-KVLDKATVPI-IKLTD-SFTEVKVDISFNVQ 306
Query: 169 AGLSALCFLEKVDRLIGKDHLFKRSVILIKAWCYYESRILGAHY-GLISTYALEMMVLHR 227
G+ A ++ + K + V+++K + R L + G I +Y+L +M +
Sbjct: 307 NGVRAADLIKDFTK---KYPVLPYLVLVLKQFLL--QRDLNEVFTGGIGSYSLFLMAVS- 360
Query: 228 FLDYYNTFDWDNYCISINGPVAISSLPEIVAETVENDGDEL-LLSPEFLKKCREIYSVPI 286
FL + D CI N + ++ E E G L K Y
Sbjct: 361 FLQLHPRED---ACIP-NTNYGV-----LLIEFFELYGRHFNYLKTGIRIKDGGSYVAKD 411
Query: 287 TALENTGHEFAIKHLNIVDPLKDNNNLGRS 316
+N + L I DPL+ N++GRS
Sbjct: 412 EVQKNMLDGYRPSMLYIEDPLQPGNDVGRS 441
>UNIPROTKB|E9PC61 [details] [associations]
symbol:PAPD5 "PAP-associated domain-containing protein 5"
species:9606 "Homo sapiens" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 EMBL:AC007597 InterPro:IPR002058 GO:GO:0016779
EMBL:AC007610 IPI:IPI00940660 HGNC:HGNC:30758
ProteinModelPortal:E9PC61 SMR:E9PC61 PRIDE:E9PC61
Ensembl:ENST00000357464 ArrayExpress:E9PC61 Bgee:E9PC61
Uniprot:E9PC61
Length = 619
Score = 131 (51.2 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 74/270 (27%), Positives = 114/270 (42%)
Query: 51 ERIQEILCTIQPAIVSEKKRKEVINYIQRLINGYY-GIEVFPFGSVPLKTYLPDGDIDLT 109
E I + + P EK R EV+N I+ +I + +V FGS YLP DIDL
Sbjct: 122 EEISDFYEYMSPRPEEEKMRMEVVNRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDLV 181
Query: 110 VLGH-QNVEEDLARFVCKILENEDQDSVFEIKDVQYVPAQVKIVKCSVQNIPVDISFNQM 168
V G +N+ + + D+DSV ++ D VP +K+ S + VDISFN
Sbjct: 182 VFGKWENLPLWTLEEALRKHKVADEDSV-KVLDKATVPI-IKLTD-SFTEVKVDISFNVQ 238
Query: 169 AGLSALCFLEKVDRLIGKDHLFKRSVILIKAWCYYESRILGAHY-GLISTYALEMMVLHR 227
G+ A ++ + K + V+++K + R L + G I +Y+L +M +
Sbjct: 239 NGVRAADLIKDFTK---KYPVLPYLVLVLKQFLL--QRDLNEVFTGGIGSYSLFLMAVS- 292
Query: 228 FLDYYNTFDWDNYCISINGPVAISSLPEIVAETVENDGDEL-LLSPEFLKKCREIYSVPI 286
FL + D CI N + ++ E E G L K Y
Sbjct: 293 FLQLHPRED---ACIP-NTNYGV-----LLIEFFELYGRHFNYLKTGIRIKDGGSYVAKD 343
Query: 287 TALENTGHEFAIKHLNIVDPLKDNNNLGRS 316
+N + L I DPL+ N++GRS
Sbjct: 344 EVQKNMLDGYRPSMLYIEDPLQPGNDVGRS 373
>UNIPROTKB|F1PHH1 [details] [associations]
symbol:PAPD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
InterPro:IPR002058 GO:GO:0016779 GeneTree:ENSGT00400000022055
EMBL:AAEX03001621 EMBL:AAEX03001622 EMBL:AAEX03001623
Ensembl:ENSCAFT00000015808 Uniprot:F1PHH1
Length = 673
Score = 131 (51.2 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 74/270 (27%), Positives = 114/270 (42%)
Query: 51 ERIQEILCTIQPAIVSEKKRKEVINYIQRLINGYY-GIEVFPFGSVPLKTYLPDGDIDLT 109
E I + + P EK R EV+N I+ +I + +V FGS YLP DIDL
Sbjct: 176 EEISDFYEYMSPRPEEEKMRMEVVNRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDLV 235
Query: 110 VLGH-QNVEEDLARFVCKILENEDQDSVFEIKDVQYVPAQVKIVKCSVQNIPVDISFNQM 168
V G +N+ + + D+DSV ++ D VP +K+ S + VDISFN
Sbjct: 236 VFGKWENLPLWTLEEALRKHKVADEDSV-KVLDKATVPI-IKLTD-SFTEVKVDISFNVQ 292
Query: 169 AGLSALCFLEKVDRLIGKDHLFKRSVILIKAWCYYESRILGAHY-GLISTYALEMMVLHR 227
G+ A ++ + K + V+++K + R L + G I +Y+L +M +
Sbjct: 293 NGVRAADLIKDFTK---KYPVLPYLVLVLKQFLL--QRDLNEVFTGGIGSYSLFLMAVS- 346
Query: 228 FLDYYNTFDWDNYCISINGPVAISSLPEIVAETVENDGDEL-LLSPEFLKKCREIYSVPI 286
FL + D CI N + ++ E E G L K Y
Sbjct: 347 FLQLHPRED---ACIP-NTNYGV-----LLIEFFELYGRHFNYLKTGIRIKDGGSYVAKD 397
Query: 287 TALENTGHEFAIKHLNIVDPLKDNNNLGRS 316
+N + L I DPL+ N++GRS
Sbjct: 398 EVQKNMLDGYRPSMLYIEDPLQPGNDVGRS 427
>UNIPROTKB|B4DV38 [details] [associations]
symbol:PAPD5 "PAP-associated domain-containing protein 5"
species:9606 "Homo sapiens" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 EMBL:AC007597 InterPro:IPR002058 GO:GO:0016779
EMBL:AC007610 RefSeq:NP_001035375.2 UniGene:Hs.514342 GeneID:64282
KEGG:hsa:64282 CTD:64282 HGNC:HGNC:30758 PharmGKB:PA134949693
HOGENOM:HOG000290646 HOVERGEN:HBG053489 GenomeRNAi:64282
NextBio:66196 EMBL:AK300918 IPI:IPI00643763 RefSeq:NP_001035374.2
SMR:B4DV38 STRING:B4DV38 Ensembl:ENST00000436909 UCSC:uc002efz.3
OMA:TYGLNYS Uniprot:B4DV38
Length = 698
Score = 131 (51.2 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 74/270 (27%), Positives = 114/270 (42%)
Query: 51 ERIQEILCTIQPAIVSEKKRKEVINYIQRLINGYY-GIEVFPFGSVPLKTYLPDGDIDLT 109
E I + + P EK R EV+N I+ +I + +V FGS YLP DIDL
Sbjct: 201 EEISDFYEYMSPRPEEEKMRMEVVNRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDLV 260
Query: 110 VLGH-QNVEEDLARFVCKILENEDQDSVFEIKDVQYVPAQVKIVKCSVQNIPVDISFNQM 168
V G +N+ + + D+DSV ++ D VP +K+ S + VDISFN
Sbjct: 261 VFGKWENLPLWTLEEALRKHKVADEDSV-KVLDKATVPI-IKLTD-SFTEVKVDISFNVQ 317
Query: 169 AGLSALCFLEKVDRLIGKDHLFKRSVILIKAWCYYESRILGAHY-GLISTYALEMMVLHR 227
G+ A ++ + K + V+++K + R L + G I +Y+L +M +
Sbjct: 318 NGVRAADLIKDFTK---KYPVLPYLVLVLKQFLL--QRDLNEVFTGGIGSYSLFLMAVS- 371
Query: 228 FLDYYNTFDWDNYCISINGPVAISSLPEIVAETVENDGDEL-LLSPEFLKKCREIYSVPI 286
FL + D CI N + ++ E E G L K Y
Sbjct: 372 FLQLHPRED---ACIP-NTNYGV-----LLIEFFELYGRHFNYLKTGIRIKDGGSYVAKD 422
Query: 287 TALENTGHEFAIKHLNIVDPLKDNNNLGRS 316
+N + L I DPL+ N++GRS
Sbjct: 423 EVQKNMLDGYRPSMLYIEDPLQPGNDVGRS 452
>UNIPROTKB|J9P9B2 [details] [associations]
symbol:PAPD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
InterPro:IPR002058 GO:GO:0016779 GeneTree:ENSGT00400000022055
OMA:TYGLNYS EMBL:AAEX03001621 EMBL:AAEX03001622 EMBL:AAEX03001623
Ensembl:ENSCAFT00000046476 Uniprot:J9P9B2
Length = 710
Score = 131 (51.2 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 74/270 (27%), Positives = 114/270 (42%)
Query: 51 ERIQEILCTIQPAIVSEKKRKEVINYIQRLINGYY-GIEVFPFGSVPLKTYLPDGDIDLT 109
E I + + P EK R EV+N I+ +I + +V FGS YLP DIDL
Sbjct: 213 EEISDFYEYMSPRPEEEKMRMEVVNRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDLV 272
Query: 110 VLGH-QNVEEDLARFVCKILENEDQDSVFEIKDVQYVPAQVKIVKCSVQNIPVDISFNQM 168
V G +N+ + + D+DSV ++ D VP +K+ S + VDISFN
Sbjct: 273 VFGKWENLPLWTLEEALRKHKVADEDSV-KVLDKATVPI-IKLTD-SFTEVKVDISFNVQ 329
Query: 169 AGLSALCFLEKVDRLIGKDHLFKRSVILIKAWCYYESRILGAHY-GLISTYALEMMVLHR 227
G+ A ++ + K + V+++K + R L + G I +Y+L +M +
Sbjct: 330 NGVRAADLIKDFTK---KYPVLPYLVLVLKQFLL--QRDLNEVFTGGIGSYSLFLMAVS- 383
Query: 228 FLDYYNTFDWDNYCISINGPVAISSLPEIVAETVENDGDEL-LLSPEFLKKCREIYSVPI 286
FL + D CI N + ++ E E G L K Y
Sbjct: 384 FLQLHPRED---ACIP-NTNYGV-----LLIEFFELYGRHFNYLKTGIRIKDGGSYVAKD 434
Query: 287 TALENTGHEFAIKHLNIVDPLKDNNNLGRS 316
+N + L I DPL+ N++GRS
Sbjct: 435 EVQKNMLDGYRPSMLYIEDPLQPGNDVGRS 464
>POMBASE|SPAC12G12.13c [details] [associations]
symbol:cid14 "poly(A) polymerase Cid14" species:4896
"Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0007000 "nucleolus organization" evidence=IMP] [GO:0016075
"rRNA catabolic process" evidence=IGI] [GO:0016077 "snoRNA
catabolic process" evidence=ISO] [GO:0016078 "tRNA catabolic
process" evidence=ISO] [GO:0031125 "rRNA 3'-end processing"
evidence=IGI] [GO:0031499 "TRAMP complex" evidence=IDA] [GO:0043630
"ncRNA polyadenylation involved in polyadenylation-dependent ncRNA
catabolic process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0065007 "biological regulation" evidence=NAS]
InterPro:IPR002934 Pfam:PF01909 PomBase:SPAC12G12.13c Pfam:PF03828
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0006397
GO:GO:0003723 GO:GO:0031499 GO:GO:0043630 GO:GO:0016075
GO:GO:0016077 GO:GO:0016078 eggNOG:COG5260 GO:GO:0004652
InterPro:IPR002058 PIR:S62544 RefSeq:NP_001018181.1
ProteinModelPortal:Q9UTN3 STRING:Q9UTN3
EnsemblFungi:SPAC12G12.13c.1 GeneID:3361384 KEGG:spo:SPAC12G12.13c
KO:K03514 OMA:LISHEEE OrthoDB:EOG43BQXK NextBio:20811434
GO:GO:0065007 GO:GO:0007000 GO:GO:0031125 Uniprot:Q9UTN3
Length = 684
Score = 128 (50.1 bits), Expect = 0.00014, P = 0.00014
Identities = 52/201 (25%), Positives = 95/201 (47%)
Query: 39 FSIDAELWLLAEERIQEILCTIQPAIVSEKKRKEVINYI-QRLINGYYGIEVFPFGSVPL 97
+ ++ E+ + + I + I P RK +++ I Q ++ + + ++ FGS
Sbjct: 231 YKVEREVSRIFHQDILHFIDYITPTPEEHAVRKTLVSRINQAVLQKWPDVSLYVFGSFET 290
Query: 98 KTYLPDGDIDLTVLG----HQNVEEDLARFV-CKILENEDQDSVFEIKDVQYVPAQVKIV 152
K YLP D+DL ++ ++ ++D+ FV L+ S ++ VP +K V
Sbjct: 291 KLYLPTSDLDLVIISPEHHYRGTKKDM--FVLAHHLKKLKLASEVQVITTANVPI-IKFV 347
Query: 153 KCSVQNIPVDISFNQMAGLSALCFLEKVDRLIGKDHLFKRSVILIKAWCYYESRILGAHY 212
+ + VDISFNQ GL C + V+ + K + VI+IK + R L +
Sbjct: 348 D-PLTKVHVDISFNQPGGLKT-CLV--VNGFMKKYPALRPLVIIIKH--FLNMRALNEVF 401
Query: 213 -GLISTYALEMMVLHRFLDYY 232
G +S+YA+ +V+ FL +
Sbjct: 402 LGGLSSYAIVCLVVS-FLQLH 421
>RGD|1309587 [details] [associations]
symbol:Papd5 "PAP associated domain containing 5" species:10116
"Rattus norvegicus" [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
RGD:1309587 InterPro:IPR002058 GO:GO:0016779 IPI:IPI00947804
Ensembl:ENSRNOT00000066059 ArrayExpress:D3ZZS9 Uniprot:D3ZZS9
Length = 590
Score = 126 (49.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 49/173 (28%), Positives = 80/173 (46%)
Query: 51 ERIQEILCTIQPAIVSEKKRKEVINYIQRLINGYY-GIEVFPFGSVPLKTYLPDGDIDLT 109
E I + + P EK R EV++ I+ +I + +V FGS YLP DIDL
Sbjct: 136 EEISDFYEYMSPRPEEEKMRMEVVSRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDLV 195
Query: 110 VLGH-QNVEEDLARFVCKILENEDQDSVFEIKDVQYVPAQVKIVKCSVQNIPVDISFNQM 168
V G +N+ + + D+DSV ++ D VP +K+ S + VDISFN
Sbjct: 196 VFGKWENLPLWTLEEALRKHKVADEDSV-KVLDKATVPI-IKLTD-SFTEVKVDISFNVQ 252
Query: 169 AGLSALCFLEKVDRLIGKDHLF----KRSVILIKAWCYYESRILGAHYGLIST 217
G+ A ++ +L ++ V+LI+ ++E + G H+ + T
Sbjct: 253 NGVRAADLIKDFTKLHPREDACIPNTNYGVLLIE---FFE--LYGRHFNYLKT 300
Score = 46 (21.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 301 LNIVDPLKDNNNLGRSVSKGNFHRIRCALSY 331
L I DPL+ N++GRS S G +++ A Y
Sbjct: 329 LYIEDPLQPGNDVGRS-SYGAM-QVKQAFDY 357
>MGI|MGI:1917820 [details] [associations]
symbol:Papd5 "PAP associated domain containing 5"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=ISO] InterPro:IPR002934 Pfam:PF01909 MGI:MGI:1917820
Pfam:PF03828 GO:GO:0005634 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 GO:GO:0003677 GO:GO:0006260
GO:GO:0071044 GO:GO:0003887 eggNOG:COG5260 InterPro:IPR002058
CTD:64282 HOGENOM:HOG000290646 HOVERGEN:HBG053489 EMBL:AK030850
EMBL:AK077553 EMBL:BC080314 EMBL:BC144796 EMBL:BC145737
IPI:IPI00223851 RefSeq:NP_001157969.1 RefSeq:NP_001157970.1
RefSeq:NP_001157971.1 UniGene:Mm.37825 ProteinModelPortal:Q68ED3
SMR:Q68ED3 PhosphoSite:Q68ED3 PRIDE:Q68ED3 GeneID:214627
KEGG:mmu:214627 UCSC:uc009mrf.1 InParanoid:A6H635 OrthoDB:EOG48SGT7
NextBio:374402 Bgee:Q68ED3 CleanEx:MM_PAPD5 Genevestigator:Q68ED3
GermOnline:ENSMUSG00000036779 Uniprot:Q68ED3
Length = 633
Score = 126 (49.4 bits), Expect = 0.00020, P = 0.00020
Identities = 73/270 (27%), Positives = 114/270 (42%)
Query: 51 ERIQEILCTIQPAIVSEKKRKEVINYIQRLINGYY-GIEVFPFGSVPLKTYLPDGDIDLT 109
E I + + P EK R EV++ I+ +I + +V FGS YLP DIDL
Sbjct: 136 EEISDFYEYMSPRPEEEKMRMEVVSRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDLV 195
Query: 110 VLGH-QNVEEDLARFVCKILENEDQDSVFEIKDVQYVPAQVKIVKCSVQNIPVDISFNQM 168
V G +N+ + + D+DSV ++ D VP +K+ S + VDISFN
Sbjct: 196 VFGKWENLPLWTLEEALRKHKVADEDSV-KVLDKATVPI-IKLTD-SFTEVKVDISFNVQ 252
Query: 169 AGLSALCFLEKVDRLIGKDHLFKRSVILIKAWCYYESRILGAHY-GLISTYALEMMVLHR 227
G+ A ++ + K + V+++K + R L + G I +Y+L +M +
Sbjct: 253 NGVRAADLIKDFTK---KYPVLPYLVLVLKQFLL--QRDLNEVFTGGIGSYSLFLMAVS- 306
Query: 228 FLDYYNTFDWDNYCISINGPVAISSLPEIVAETVENDGDEL-LLSPEFLKKCREIYSVPI 286
FL + D CI N + ++ E E G L K Y
Sbjct: 307 FLQLHPRED---ACIP-NTNYGV-----LLIEFFELYGRHFNYLKTGIRIKDGGSYVAKD 357
Query: 287 TALENTGHEFAIKHLNIVDPLKDNNNLGRS 316
+N + L I DPL+ N++GRS
Sbjct: 358 EVQKNMLDGYRPSMLYIEDPLQPGNDVGRS 387
>WB|WBGene00014115 [details] [associations]
symbol:gld-4 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0043186 "P granule" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IDA] [GO:0006378 "mRNA
polyadenylation" evidence=IDA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 GO:GO:0005524 GO:GO:0009792 GO:GO:0007126
GO:GO:0040010 GO:GO:0048471 GO:GO:0046872 GO:GO:0006378
GO:GO:0040035 GO:GO:0007281 GO:GO:0043186 GO:GO:0004652
InterPro:IPR002058 KO:K03514 EMBL:Z79759 EMBL:FJ610054
RefSeq:NP_492446.3 UniGene:Cel.16131 ProteinModelPortal:G5EFL0
SMR:G5EFL0 EnsemblMetazoa:ZK858.1 GeneID:172735
KEGG:cel:CELE_ZK858.1 CTD:172735 WormBase:ZK858.1
GeneTree:ENSGT00400000022055 OMA:KISMFGS NextBio:876795
Uniprot:G5EFL0
Length = 845
Score = 135 (52.6 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 79/301 (26%), Positives = 142/301 (47%)
Query: 51 ERIQEILCTIQPAIVSEKKRKEVINYIQRLINGYYG---IEVFPFGSVPLKTYLPDGDID 107
E I ++ I+P + + R +V ++ + + I++ FGS+ +LP DID
Sbjct: 82 EEIVDMYHWIKPNEIESRLRTKVFEKVRDSVLRRWKQKTIKISMFGSLRTNLFLPTSDID 141
Query: 108 LTVLGHQNVEEDLARFVCKILENEDQDSVFEIKDVQYVPAQVKIVKCSVQN--IPVDISF 165
+ V V ++ + + D++ E V Y A V IVK ++ + +DISF
Sbjct: 142 VLVECDDWVGTP-GDWLAETARGLEADNIAESVMV-YGGAFVPIVKMVDRDTRLSIDISF 199
Query: 166 NQMAGLSALCFLEKVDRLIGKDHLFKRSVILIKAWCYYESRILGAHYGLISTYALEMMVL 225
N + G+ A ++ KV + L + V+L+K + +Y + + G +S+Y L ++++
Sbjct: 200 NTVQGVRAASYIAKVKE---EFPLIEPLVLLLKQFLHYRN-LNQTFTGGLSSYGLVLLLV 255
Query: 226 HRFLDY-YNTFDWDNYCISIN-GPVAISSLPEIVAETVENDGDELLLSPEFLKKCREIYS 283
+ F Y N Y +N G + + L E+ + +E + +E+ +SP +C Y
Sbjct: 256 NFFQLYALNMRSRTIYDRGVNLGHLLLRFL-ELYS--LEFNFEEMGISPG---QC--CY- 306
Query: 284 VPITAL-ENTGHEFAIK-HLNIVDPLKDNNNLGRSVSKGNFHRIRCALSYGAQRLGEILT 341
+P +A GH+ A +L + DPL N++GRS NF I A Q L +T
Sbjct: 307 IPKSASGARYGHKQAQPGNLALEDPLLTANDVGRSTY--NFSSIANAFGQAFQILLVAVT 364
Query: 342 L 342
L
Sbjct: 365 L 365
Score = 38 (18.4 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 595 SPVVTTIMFGTYEHSLKPSVLPSPSA 620
S V + G+Y ++L S + PSA
Sbjct: 775 SMAVVNVGRGSYRNALTTSPMTPPSA 800
>ZFIN|ZDB-GENE-041021-1 [details] [associations]
symbol:papd7 "PAP associated domain containing 7"
species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 ZFIN:ZDB-GENE-041021-1 InterPro:IPR002058
GO:GO:0016779 GeneTree:ENSGT00400000022055 EMBL:BX511155
IPI:IPI00490581 Ensembl:ENSDART00000089425 Bgee:F1Q7F1
Uniprot:F1Q7F1
Length = 762
Score = 125 (49.1 bits), Expect = 0.00033, P = 0.00033
Identities = 70/272 (25%), Positives = 121/272 (44%)
Query: 51 ERIQEILCTIQPAIVSEKKRKEVINYIQRLINGYYGI-EVFPFGSVPLKTYLPDGDIDLT 109
E I + + P R+EV++ I+ +I + +V FGS +LP DIDL
Sbjct: 232 EEIMDFYNFMSPRPEEATMRQEVVDRIESVIKELWPTADVQIFGSFSTGLFLPTSDIDLV 291
Query: 110 VLGHQNVEEDLARFVCKILENEDQDSVFEIKDVQYVPAQVKIVKCSVQN--IPVDISFNQ 167
V G E+ + + + L + IK + A V I+K + Q + VDISFN
Sbjct: 292 VFGKW--EKPPLQQLEQALRKHSVAEPYSIKVLD--KATVPIIKLTDQETEVKVDISFNV 347
Query: 168 MAGLSALCFLEKVDRLIGKDHLFKRSVILIKAWCYYESRILGAHY-GLISTYALEMMVLH 226
G+ A F+++ + K + + ++K + R L + G IS+Y+L +MV+
Sbjct: 348 ETGIKAASFIKEY---VKKYTVLPYLIFVLKQFLL--QRDLNEVFTGGISSYSLILMVIS 402
Query: 227 RFLDYYNTFDWDNYCISINGPVAISSLPEIVAETVE--NDGDELLLSPEFLKKCREIYSV 284
FL + D N ++N + + E+ G + ++ K +I
Sbjct: 403 -FLQLHPRIDTRNP--NMNLGILLIEFFELYGRHFNYLKTGIRIKNGGAYMAK-EDI--- 455
Query: 285 PITALENTGHEFAIKHLNIVDPLKDNNNLGRS 316
+ A+ N G+ ++ L I DPL N++GRS
Sbjct: 456 -MKAMSN-GYRPSM--LCIEDPLLPGNDVGRS 483
>UNIPROTKB|F1NJM3 [details] [associations]
symbol:PAPD7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
GO:GO:0005634 GO:GO:0042493 InterPro:IPR002058 GO:GO:0016779
GeneTree:ENSGT00400000022055 EMBL:AADN02007996 EMBL:AADN02007997
EMBL:AADN02007998 EMBL:AADN02007999 EMBL:AADN02008000
EMBL:AADN02008001 EMBL:AADN02008002 IPI:IPI00571796
Ensembl:ENSGALT00000021321 ArrayExpress:F1NJM3 Uniprot:F1NJM3
Length = 370
Score = 120 (47.3 bits), Expect = 0.00040, P = 0.00040
Identities = 50/171 (29%), Positives = 81/171 (47%)
Query: 70 RKEVINYIQRLINGYYGI-EVFPFGSVPLKTYLPDGDIDLTVLGHQNVEEDLARFVCKIL 128
R+EV+ I+ +I + +V FGS YLP DIDL V G E + + + L
Sbjct: 11 RREVVKRIETVIKDLWPTADVQIFGSFSTGLYLPTSDIDLVVFGKW--ERPPLQLLEQAL 68
Query: 129 ENEDQDSVFEIKDVQYVPAQVKIVKCSVQN--IPVDISFNQMAGLSALCFLEKVDRLIGK 186
+ + IK + A V I+K + Q + VDISFN G+ A F+++ + K
Sbjct: 69 RKHNVAEPYSIKVLD--KATVPIIKLTDQETEVKVDISFNVETGVKAARFIKEYMK---K 123
Query: 187 DHLFKRSVILIKAWCYYESRILGAHY-GLISTYALEMMVLHRFLDYYNTFD 236
L ++++K + R L + G IS+Y+L +M + FL + D
Sbjct: 124 YTLLPYLILVLKQFLL--QRDLNEVFTGGISSYSLILMAIS-FLQLHPRID 171
>UNIPROTKB|E1BX86 [details] [associations]
symbol:PAPD7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
GO:GO:0005634 GO:GO:0042493 InterPro:IPR002058 GO:GO:0016779
GeneTree:ENSGT00400000022055 OMA:DNRIKIK EMBL:AADN02007996
EMBL:AADN02007997 EMBL:AADN02007998 EMBL:AADN02007999
EMBL:AADN02008000 EMBL:AADN02008001 EMBL:AADN02008002
IPI:IPI00813219 Ensembl:ENSGALT00000021322 ArrayExpress:E1BX86
Uniprot:E1BX86
Length = 423
Score = 120 (47.3 bits), Expect = 0.00050, P = 0.00050
Identities = 50/171 (29%), Positives = 81/171 (47%)
Query: 70 RKEVINYIQRLINGYYGI-EVFPFGSVPLKTYLPDGDIDLTVLGHQNVEEDLARFVCKIL 128
R+EV+ I+ +I + +V FGS YLP DIDL V G E + + + L
Sbjct: 11 RREVVKRIETVIKDLWPTADVQIFGSFSTGLYLPTSDIDLVVFGKW--ERPPLQLLEQAL 68
Query: 129 ENEDQDSVFEIKDVQYVPAQVKIVKCSVQN--IPVDISFNQMAGLSALCFLEKVDRLIGK 186
+ + IK + A V I+K + Q + VDISFN G+ A F+++ + K
Sbjct: 69 RKHNVAEPYSIKVLD--KATVPIIKLTDQETEVKVDISFNVETGVKAARFIKEYMK---K 123
Query: 187 DHLFKRSVILIKAWCYYESRILGAHY-GLISTYALEMMVLHRFLDYYNTFD 236
L ++++K + R L + G IS+Y+L +M + FL + D
Sbjct: 124 YTLLPYLILVLKQFLL--QRDLNEVFTGGISSYSLILMAIS-FLQLHPRID 171
>DICTYBASE|DDB_G0295737 [details] [associations]
symbol:DDB_G0295737 "PAP/25A-associated
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
InterPro:IPR002934 Pfam:PF01909 dictyBase:DDB_G0295737 Pfam:PF03828
EMBL:AAFI02000149 InterPro:IPR002058 GO:GO:0016779
RefSeq:XP_002649102.1 EnsemblProtists:DDB0252871 GeneID:8627367
KEGG:ddi:DDB_G0295737 OMA:NIDICFD Uniprot:C7G070
Length = 938
Score = 124 (48.7 bits), Expect = 0.00055, P = 0.00055
Identities = 64/273 (23%), Positives = 124/273 (45%)
Query: 60 IQPAIVSEKKRKEVINYIQRLINGYYG-IEVFPFGSVPLKTYLPDGDIDLTVLGHQNVE- 117
++P+ + + R+++I + ++ + V FGS ++P DID+ + G N E
Sbjct: 457 LEPSELESRIRQKIIRDLDAIVKSNWPKANVVVFGSFSSNLFIPSSDIDIQISGINNAES 516
Query: 118 -----EDLARFVCKILENEDQDSVFEIKDVQYVPAQVKIVKC--SVQNIPVDISFNQMAG 170
++ R + I+ QDS ++++ A+V I+K S + +DI F+ G
Sbjct: 517 VNKYNQNPIRDLFDIIIRNHQDSFINVRNI--FGAKVPIIKMTSSHSHYNIDICFDTPNG 574
Query: 171 LSALCFLEKVDRLIGKDHLFKRSVILIKAWCYYESRILGAHYGLISTYALEMMVLHRFLD 230
+ V L+ K + R+++LI + +++ + + G I +YAL +MV+
Sbjct: 575 IENTAV---VKGLL-KQYKSMRTLLLIIKFFLHQNNLNETYTGGIGSYALALMVVSFIQL 630
Query: 231 YYNTFDWDNYCISINGPVAISSLPEIVAETVENDGDELLLSPEFLKKC-REI-YSVPITA 288
Y + C S P + A + G L+ EFL+ R YS+ +
Sbjct: 631 RYVPHQYR--CQS---PTSKIRREYRHAGDATDYGSMLI---EFLELYGRSFNYSLYGIS 682
Query: 289 LENTGHEFAIKH-----LNIVDPLKDNNNLGRS 316
LEN G+ + + L ++DP +N++G+S
Sbjct: 683 LENGGYYYKKEEQWGTSLTLIDPHDRDNDVGKS 715
>SGD|S000005243 [details] [associations]
symbol:TRF5 "Non-canonical poly(A) polymerase" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0031499 "TRAMP complex" evidence=IDA]
[GO:0071051 "polyadenylation-dependent snoRNA 3'-end processing"
evidence=IGI] [GO:0043629 "ncRNA polyadenylation" evidence=IGI]
[GO:0034475 "U4 snRNA 3'-end processing" evidence=IGI;IMP]
[GO:0007067 "mitosis" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0071035 "nuclear polyadenylation-dependent rRNA
catabolic process" evidence=IGI;IMP] [GO:0071036 "nuclear
polyadenylation-dependent snoRNA catabolic process" evidence=IGI]
[GO:0071037 "nuclear polyadenylation-dependent snRNA catabolic
process" evidence=IGI] [GO:0071038 "nuclear
polyadenylation-dependent tRNA catabolic process" evidence=IGI]
[GO:0071039 "nuclear polyadenylation-dependent CUT catabolic
process" evidence=IGI] [GO:0071044 "histone mRNA catabolic process"
evidence=IGI] [GO:0071050 "snoRNA polyadenylation" evidence=IGI]
[GO:0071042 "nuclear polyadenylation-dependent mRNA catabolic
process" evidence=IGI] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IGI;ISS;IMP;IDA] [GO:0007049
"cell cycle" evidence=IEA] InterPro:IPR002934 Pfam:PF01909
SGD:S000005243 Pfam:PF03828 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 EMBL:BK006947 GO:GO:0031499
GO:GO:0071039 GO:GO:0071035 GO:GO:0071036 GO:GO:0071037
GO:GO:0071038 GO:GO:0071044 EMBL:U23084 eggNOG:COG5260
GO:GO:0004652 InterPro:IPR002058 OrthoDB:EOG43BQXK GO:GO:0071042
GO:GO:0071051 GeneTree:ENSGT00400000022055 GO:GO:0034475
HOGENOM:HOG000246586 GO:GO:0071050 EMBL:U47282 EMBL:Z71575
PIR:S60401 RefSeq:NP_014100.2 ProteinModelPortal:P48561 SMR:P48561
IntAct:P48561 MINT:MINT-1776475 STRING:P48561 EnsemblFungi:YNL299W
GeneID:855417 KEGG:sce:YNL299W KO:K12596 OMA:DFNDERD NextBio:979271
Genevestigator:P48561 GermOnline:YNL299W Uniprot:P48561
Length = 642
Score = 120 (47.3 bits), Expect = 0.00092, P = 0.00092
Identities = 67/282 (23%), Positives = 124/282 (43%)
Query: 46 WLLAEERIQEILCTIQPAIVSEKKRKEVINYIQRLINGYYG-IEVFPFGSVPLKTYLPDG 104
WL +E I++ + I P+ K R I+ ++R + + ++ FGS YLP
Sbjct: 175 WLTSE--IKDFVHYISPSKNEIKCRNRTIDKLRRAVKELWSDADLHVFGSFATDLYLPGS 232
Query: 105 DIDLTVLGHQNVEEDLARFVCKI---LENEDQDSVFEIKDVQYVPAQVKIVKCSVQNIPV 161
DID V +ED ++ ++ L+N+ E+ VP +K ++ Q + +
Sbjct: 233 DIDCVVNSRNRDKED-RNYIYELARHLKNKGLAIRMEVIVKTRVPI-IKFIEPQSQ-LHI 289
Query: 162 DISFNQMAGLSALCFLEKVDRLIGKDHLFKRSVILIKAWCYYESRILGAHYGLISTYALE 221
D+SF + GL A K+ R +D R ++LI + R+ H G + + +
Sbjct: 290 DVSFERTNGLEAA----KLIREWLRDSPGLRELVLIIKQFLHSRRLNNVHTGGLGGFTVI 345
Query: 222 MMVLHRFLDYYNTFDWDNYCISINGPVAISSLPEIVAETVENDGDELLLSPEFLKKCREI 281
+V + FL+ + ++ + N V + E+ + D + +S + +
Sbjct: 346 CLV-YSFLNMHPRIKSNDIDVLDNLGVLLIDFFELYGKNFGYDDVAISISDGYASYIPK- 403
Query: 282 YSVPITALENTGHEFAIKHLNIVDPLKDNNNLGRSVSKGNFH 323
S T LE + +F+ L I DP NNN +S+G+F+
Sbjct: 404 -SCWRT-LEPSRSKFS---LAIQDPGDPNNN----ISRGSFN 436
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.137 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 659 616 0.00088 120 3 11 22 0.40 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 621 (66 KB)
Total size of DFA: 345 KB (2174 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 52.14u 0.10s 52.24t Elapsed: 00:00:06
Total cpu time: 52.15u 0.10s 52.25t Elapsed: 00:00:06
Start: Sat May 11 16:11:19 2013 End: Sat May 11 16:11:25 2013