Query 006145
Match_columns 659
No_of_seqs 764 out of 5049
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 17:11:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006145.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006145hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ogq_A PGIP-2, polygalacturona 100.0 1.5E-44 5.1E-49 376.5 19.3 293 27-357 2-306 (313)
2 3rgz_A Protein brassinosteroid 100.0 8.7E-43 3E-47 406.6 20.6 327 26-358 7-383 (768)
3 4eco_A Uncharacterized protein 100.0 6.7E-40 2.3E-44 374.0 18.7 314 29-357 28-471 (636)
4 4ecn_A Leucine-rich repeat pro 100.0 4.5E-39 1.6E-43 374.4 20.6 314 27-357 265-711 (876)
5 4asz_A BDNF/NT-3 growth factor 100.0 4.1E-39 1.4E-43 331.1 10.7 171 477-657 13-202 (299)
6 4aoj_A High affinity nerve gro 100.0 9.4E-39 3.2E-43 333.0 12.5 172 477-658 41-233 (329)
7 3omv_A RAF proto-oncogene seri 100.0 3.4E-38 1.2E-42 324.5 13.8 168 475-657 34-206 (307)
8 3rgz_A Protein brassinosteroid 100.0 2.1E-37 7.2E-42 361.2 22.4 287 74-360 343-721 (768)
9 4gt4_A Tyrosine-protein kinase 100.0 2.6E-38 9E-43 326.5 11.7 169 479-657 28-219 (308)
10 4fih_A Serine/threonine-protei 100.0 5.3E-38 1.8E-42 327.2 12.6 169 476-658 73-243 (346)
11 4b9d_A Serine/threonine-protei 100.0 7E-38 2.4E-42 326.8 11.1 172 476-658 23-198 (350)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.5E-37 5.2E-42 319.0 11.1 168 477-657 32-206 (311)
13 3hmm_A TGF-beta receptor type- 100.0 2.2E-37 7.4E-42 320.1 12.0 169 478-657 4-184 (303)
14 4fie_A Serine/threonine-protei 100.0 3.5E-37 1.2E-41 328.8 13.5 169 476-658 150-320 (423)
15 3fpq_A Serine/threonine-protei 100.0 6.4E-37 2.2E-41 312.7 14.7 170 480-657 29-202 (290)
16 3hyh_A Carbon catabolite-derep 100.0 7.2E-37 2.5E-41 309.6 12.5 168 477-658 13-184 (275)
17 4g31_A Eukaryotic translation 100.0 1.1E-36 3.9E-41 313.4 12.0 179 477-658 5-203 (299)
18 4g3f_A NF-kappa-beta-inducing 100.0 1.2E-36 4.2E-41 315.9 10.6 164 477-658 58-229 (336)
19 3ubd_A Ribosomal protein S6 ki 100.0 5.8E-37 2E-41 314.6 6.2 168 477-657 24-198 (304)
20 4ase_A Vascular endothelial gr 100.0 1.7E-36 5.9E-41 318.5 8.9 182 467-657 54-259 (353)
21 3v47_A TOLL-like receptor 5B a 100.0 1.9E-34 6.5E-39 315.9 25.4 291 57-359 6-387 (455)
22 4fcg_A Uncharacterized protein 100.0 2E-35 6.9E-40 309.5 14.9 273 28-354 24-312 (328)
23 1ogq_A PGIP-2, polygalacturona 100.0 2.6E-35 9E-40 306.6 13.2 232 107-361 50-286 (313)
24 2id5_A Lingo-1, leucine rich r 100.0 1.8E-32 6E-37 302.3 24.5 274 75-357 33-310 (477)
25 3v47_A TOLL-like receptor 5B a 100.0 2.9E-32 1E-36 298.5 24.9 253 107-359 30-363 (455)
26 4b99_A Mitogen-activated prote 100.0 1.6E-33 5.4E-38 301.0 13.3 173 477-657 54-234 (398)
27 3oja_B Anopheles plasmodium-re 100.0 3.7E-32 1.3E-36 308.0 24.8 251 102-358 70-339 (597)
28 2id5_A Lingo-1, leucine rich r 100.0 3E-32 1E-36 300.4 23.3 275 74-357 56-334 (477)
29 4f9c_A Cell division cycle 7-r 100.0 2.8E-33 9.5E-38 295.9 12.8 167 474-658 18-219 (361)
30 3o6n_A APL1; leucine-rich repe 100.0 1.3E-31 4.6E-36 287.4 23.9 268 75-358 46-333 (390)
31 3v5w_A G-protein coupled recep 100.0 5.3E-33 1.8E-37 309.7 12.9 169 476-658 188-363 (689)
32 4eco_A Uncharacterized protein 100.0 5E-32 1.7E-36 309.0 20.1 279 74-357 206-527 (636)
33 3vq2_A TLR4, TOLL-like recepto 100.0 3E-31 1E-35 301.3 25.3 300 57-358 5-512 (606)
34 3t6q_A CD180 antigen; protein- 100.0 7.9E-31 2.7E-35 297.8 27.8 273 75-358 255-538 (606)
35 3uto_A Twitchin; kinase, muscl 100.0 1.2E-32 4.1E-37 308.4 12.5 170 476-657 156-328 (573)
36 4g8a_A TOLL-like receptor 4; l 100.0 4.5E-31 1.5E-35 300.8 25.7 303 48-360 12-559 (635)
37 3t6q_A CD180 antigen; protein- 100.0 2.7E-31 9.2E-36 301.7 23.7 273 74-357 278-561 (606)
38 1xku_A Decorin; proteoglycan, 100.0 1.8E-30 6E-35 272.2 27.6 266 76-357 33-307 (330)
39 2ft3_A Biglycan; proteoglycan, 100.0 1.7E-30 5.6E-35 272.7 25.1 264 76-356 35-307 (332)
40 3j0a_A TOLL-like receptor 5; m 100.0 1.3E-30 4.5E-35 307.0 25.1 289 69-357 19-376 (844)
41 1xku_A Decorin; proteoglycan, 100.0 5.4E-30 1.8E-34 268.5 26.6 265 75-354 53-330 (330)
42 2ft3_A Biglycan; proteoglycan, 100.0 3.6E-30 1.2E-34 270.2 25.2 264 75-354 55-331 (332)
43 2z7x_B TOLL-like receptor 1, v 100.0 1.7E-30 5.7E-35 289.6 24.0 269 74-356 21-434 (520)
44 1ziw_A TOLL-like receptor 3; i 100.0 2.9E-30 9.8E-35 297.3 26.0 275 74-357 25-343 (680)
45 4ecn_A Leucine-rich repeat pro 100.0 1.8E-30 6E-35 302.3 23.5 277 74-357 448-767 (876)
46 4fcg_A Uncharacterized protein 100.0 2.2E-30 7.5E-35 271.2 21.1 214 106-359 80-293 (328)
47 2z81_A CD282 antigen, TOLL-lik 100.0 3.7E-31 1.3E-35 296.9 16.1 157 75-240 27-210 (549)
48 3vq2_A TLR4, TOLL-like recepto 100.0 7.1E-30 2.4E-34 290.0 25.4 285 74-358 56-536 (606)
49 2z7x_B TOLL-like receptor 1, v 100.0 1.8E-30 6E-35 289.5 19.1 262 77-357 3-388 (520)
50 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 8.7E-30 3E-34 286.7 24.9 266 74-356 52-463 (562)
51 3j0a_A TOLL-like receptor 5; m 100.0 8.6E-30 2.9E-34 300.0 24.2 247 107-358 266-562 (844)
52 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 6.9E-30 2.3E-34 287.5 22.2 265 76-357 33-442 (562)
53 2z63_A TOLL-like receptor 4, v 100.0 1.8E-29 6E-34 284.4 24.6 285 75-359 29-510 (570)
54 2z66_A Variable lymphocyte rec 100.0 6.8E-30 2.3E-34 264.7 18.5 227 107-334 28-263 (306)
55 3uim_A Brassinosteroid insensi 100.0 1.5E-30 5.3E-35 272.0 13.8 187 464-657 17-207 (326)
56 3oja_B Anopheles plasmodium-re 100.0 1.7E-29 5.8E-34 286.2 22.8 248 101-358 93-360 (597)
57 3zyi_A Leucine-rich repeat-con 100.0 5.8E-29 2E-33 272.3 26.2 226 107-333 75-304 (452)
58 2z80_A TOLL-like receptor 2, v 100.0 6.3E-30 2.2E-34 270.6 17.8 250 107-357 52-315 (353)
59 2qkw_B Protein kinase; three-h 100.0 1.5E-30 5.2E-35 271.6 12.3 181 467-657 29-213 (321)
60 2c30_A Serine/threonine-protei 100.0 5.5E-30 1.9E-34 267.5 15.7 178 466-657 24-213 (321)
61 3o6n_A APL1; leucine-rich repe 100.0 4.2E-29 1.4E-33 268.0 22.8 265 74-357 69-353 (390)
62 3zyj_A Leucine-rich repeat-con 100.0 9.5E-29 3.2E-33 269.6 26.0 225 107-332 64-292 (440)
63 4aw2_A Serine/threonine-protei 100.0 1.1E-30 3.9E-35 283.2 10.6 178 468-657 65-248 (437)
64 3fe3_A MAP/microtubule affinit 100.0 2.8E-30 9.6E-35 270.3 13.2 169 476-657 14-185 (328)
65 1ziw_A TOLL-like receptor 3; i 100.0 9.2E-29 3.1E-33 284.7 25.7 250 107-356 25-309 (680)
66 1o6l_A RAC-beta serine/threoni 100.0 6E-30 2E-34 268.7 14.3 170 476-658 4-178 (337)
67 3s95_A LIMK-1, LIM domain kina 100.0 5.4E-30 1.9E-34 265.9 13.8 169 477-657 10-194 (310)
68 3fxz_A Serine/threonine-protei 100.0 9.8E-30 3.3E-34 262.5 15.0 168 476-657 19-188 (297)
69 4fr4_A YANK1, serine/threonine 100.0 7.7E-30 2.6E-34 272.1 14.5 169 477-658 15-187 (384)
70 3v8s_A RHO-associated protein 100.0 2.1E-30 7.1E-35 279.0 9.8 175 469-657 61-241 (410)
71 3qd2_B Eukaryotic translation 100.0 1.3E-29 4.4E-34 265.2 14.2 179 476-657 5-248 (332)
72 1wwl_A Monocyte differentiatio 100.0 3.8E-31 1.3E-35 275.1 2.2 223 109-356 65-309 (312)
73 2yab_A Death-associated protei 100.0 1.9E-29 6.7E-34 267.3 14.7 169 476-657 11-190 (361)
74 2vd5_A DMPK protein; serine/th 100.0 3.6E-30 1.2E-34 277.3 9.0 179 467-657 51-235 (412)
75 1ozn_A Reticulon 4 receptor; N 100.0 9.1E-29 3.1E-33 253.6 19.0 230 68-309 5-239 (285)
76 4dc2_A Protein kinase C IOTA t 100.0 8E-30 2.7E-34 272.9 11.5 170 476-658 51-226 (396)
77 2nru_A Interleukin-1 receptor- 100.0 4E-29 1.4E-33 258.9 16.0 182 465-657 13-207 (307)
78 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.1E-29 3.7E-34 268.5 11.4 169 476-657 22-196 (353)
79 2z66_A Variable lymphocyte rec 100.0 1.5E-28 5E-33 254.7 19.5 242 112-357 12-262 (306)
80 3zgw_A Maternal embryonic leuc 100.0 1.9E-29 6.4E-34 265.8 12.8 169 476-657 9-181 (347)
81 2zv2_A Calcium/calmodulin-depe 100.0 4.6E-29 1.6E-33 257.4 15.3 171 476-658 12-210 (298)
82 1tki_A Titin; serine kinase, m 100.0 3.2E-29 1.1E-33 261.6 13.9 169 476-657 4-175 (321)
83 3zyi_A Leucine-rich repeat-con 100.0 6.7E-28 2.3E-32 263.8 25.0 226 131-358 75-305 (452)
84 1wwl_A Monocyte differentiatio 100.0 2.7E-30 9.2E-35 268.7 5.5 227 103-358 39-289 (312)
85 3p86_A Serine/threonine-protei 100.0 6.6E-30 2.3E-34 265.3 8.3 176 471-657 31-211 (309)
86 4g8a_A TOLL-like receptor 4; l 100.0 8.5E-28 2.9E-32 273.7 26.2 254 107-360 52-535 (635)
87 4euu_A Serine/threonine-protei 100.0 3.4E-29 1.2E-33 261.1 13.3 173 477-657 9-187 (319)
88 1xjd_A Protein kinase C, theta 100.0 2.2E-29 7.5E-34 265.2 11.9 171 474-657 14-190 (345)
89 1fot_A TPK1 delta, CAMP-depend 100.0 3.5E-29 1.2E-33 260.8 13.1 167 476-657 5-175 (318)
90 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.3E-29 1.1E-33 262.9 12.7 169 476-658 8-180 (336)
91 2y0a_A Death-associated protei 100.0 4.7E-29 1.6E-33 260.9 13.8 168 477-657 11-189 (326)
92 2bdw_A Hypothetical protein K1 100.0 4.2E-29 1.4E-33 265.2 13.3 169 476-657 28-202 (362)
93 3a8x_A Protein kinase C IOTA t 100.0 3.7E-29 1.3E-33 263.7 12.8 168 477-657 9-182 (345)
94 2z81_A CD282 antigen, TOLL-lik 100.0 2.1E-28 7.3E-33 274.4 19.8 139 107-245 26-167 (549)
95 2i0e_A Protein kinase C-beta I 100.0 3.5E-29 1.2E-33 264.4 12.2 169 476-657 19-193 (353)
96 4eqm_A Protein kinase; transfe 100.0 4.8E-29 1.7E-33 256.9 12.9 169 476-657 10-184 (294)
97 2acx_A G protein-coupled recep 100.0 4E-29 1.4E-33 277.9 13.1 171 476-657 183-357 (576)
98 1kob_A Twitchin; kinase, intra 100.0 6E-29 2.1E-33 265.9 14.0 170 476-657 50-222 (387)
99 2z80_A TOLL-like receptor 2, v 100.0 1.3E-28 4.4E-33 260.6 16.1 272 51-336 22-318 (353)
100 4fmz_A Internalin; leucine ric 100.0 2.2E-27 7.6E-32 250.2 25.6 260 74-358 66-326 (347)
101 2psq_A Fibroblast growth facto 100.0 4.4E-29 1.5E-33 265.8 12.4 172 476-657 80-277 (370)
102 3bz5_A Internalin-J, INLJ; leu 100.0 2.2E-27 7.5E-32 259.5 26.1 252 74-357 42-300 (457)
103 3zyj_A Leucine-rich repeat-con 100.0 1.8E-27 6.3E-32 259.4 25.4 231 123-357 58-293 (440)
104 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.6E-29 1.2E-33 266.1 11.4 170 475-657 63-257 (365)
105 2x4f_A Myosin light chain kina 100.0 3.9E-29 1.3E-33 266.4 11.6 165 481-657 93-260 (373)
106 3tki_A Serine/threonine-protei 100.0 6E-29 2E-33 259.8 12.6 169 476-657 6-179 (323)
107 3q4u_A Activin receptor type-1 100.0 9.8E-29 3.3E-33 255.0 14.0 168 476-657 7-189 (301)
108 3i6u_A CDS1, serine/threonine- 100.0 1.2E-28 3.9E-33 267.0 15.1 169 475-657 133-313 (419)
109 3kul_A Ephrin type-A receptor 100.0 6.3E-29 2.2E-33 259.9 12.3 170 476-657 48-226 (325)
110 2qol_A Ephrin receptor; recept 100.0 4.8E-29 1.7E-33 265.7 11.6 170 476-657 44-222 (373)
111 3soc_A Activin receptor type-2 100.0 5E-29 1.7E-33 260.3 11.4 173 476-657 23-205 (322)
112 2y94_A 5'-AMP-activated protei 100.0 9.1E-29 3.1E-33 271.0 13.8 168 477-657 16-187 (476)
113 1rdq_E PKA C-alpha, CAMP-depen 100.0 6.9E-29 2.4E-33 262.1 12.4 166 477-657 41-210 (350)
114 3bz5_A Internalin-J, INLJ; leu 100.0 3.2E-27 1.1E-31 258.3 26.0 253 74-357 64-353 (457)
115 4hcu_A Tyrosine-protein kinase 100.0 9.2E-29 3.2E-33 251.1 12.6 168 477-657 10-179 (269)
116 3p1a_A MYT1 kinase, membrane-a 100.0 6.3E-29 2.1E-33 258.2 11.5 168 477-657 57-228 (311)
117 4fmz_A Internalin; leucine ric 100.0 1.7E-27 5.9E-32 251.0 22.7 258 74-356 88-346 (347)
118 3a62_A Ribosomal protein S6 ki 100.0 4.7E-29 1.6E-33 261.1 10.1 169 476-657 16-193 (327)
119 3niz_A Rhodanese family protei 100.0 1E-28 3.5E-33 256.6 12.4 169 476-657 20-191 (311)
120 3f3z_A Calcium/calmodulin-depe 100.0 1.2E-28 4.2E-33 251.3 12.6 169 476-657 8-180 (277)
121 4ejn_A RAC-alpha serine/threon 100.0 3.6E-29 1.2E-33 273.4 9.1 169 476-657 147-321 (446)
122 2r5t_A Serine/threonine-protei 100.0 5.8E-29 2E-33 264.7 10.4 169 476-657 37-211 (373)
123 3uc3_A Serine/threonine-protei 100.0 1.1E-28 3.7E-33 261.9 12.4 168 476-657 19-189 (361)
124 3dls_A PAS domain-containing s 100.0 1E-28 3.5E-33 259.4 11.8 170 475-657 22-201 (335)
125 2w4o_A Calcium/calmodulin-depe 100.0 1E-28 3.4E-33 261.0 11.7 168 475-657 51-222 (349)
126 3ugc_A Tyrosine-protein kinase 100.0 5.1E-29 1.8E-33 256.6 8.9 172 476-657 9-189 (295)
127 3c0i_A Peripheral plasma membr 100.0 7E-29 2.4E-33 262.4 10.1 171 477-657 24-205 (351)
128 2vuw_A Serine/threonine-protei 100.0 1.2E-28 4E-33 259.0 11.6 171 476-658 19-250 (336)
129 4eut_A Serine/threonine-protei 100.0 1.3E-28 4.4E-33 264.8 12.0 173 477-657 9-187 (396)
130 3vhe_A Vascular endothelial gr 100.0 5.3E-29 1.8E-33 263.9 8.8 182 467-657 12-267 (359)
131 2pmi_A Negative RE, cyclin-dep 100.0 3.6E-28 1.2E-32 253.2 14.9 171 476-657 4-180 (317)
132 3o0g_A Cell division protein k 100.0 2.7E-28 9.1E-33 250.9 13.8 168 477-657 2-173 (292)
133 3rp9_A Mitogen-activated prote 100.0 1.8E-28 6.3E-33 268.8 13.0 173 476-657 52-255 (458)
134 3soa_A Calcium/calmodulin-depe 100.0 1.9E-28 6.6E-33 266.5 12.8 169 476-657 10-185 (444)
135 1ob3_A PFPK5, cell division co 100.0 1.4E-28 4.8E-33 252.5 10.8 168 477-657 2-172 (288)
136 3gen_A Tyrosine-protein kinase 100.0 8.8E-29 3E-33 253.2 9.1 170 475-657 22-193 (283)
137 1luf_A Muscle-specific tyrosin 100.0 1.2E-28 4.2E-33 259.3 10.2 177 471-657 41-248 (343)
138 1qcf_A Haematopoetic cell kina 100.0 1.3E-28 4.3E-33 269.6 10.7 172 473-657 184-357 (454)
139 3c4z_A Rhodopsin kinase; Ser/T 99.9 2.8E-28 9.5E-33 270.3 13.3 171 477-657 185-361 (543)
140 1o6v_A Internalin A; bacterial 99.9 7.6E-27 2.6E-31 256.5 24.5 254 74-356 68-322 (466)
141 3sxs_A Cytoplasmic tyrosine-pr 99.9 2.2E-28 7.6E-33 248.1 11.3 169 476-657 7-177 (268)
142 1ozn_A Reticulon 4 receptor; N 99.9 5.5E-27 1.9E-31 240.3 21.8 221 110-333 14-239 (285)
143 1opk_A P150, C-ABL, proto-onco 99.9 2.2E-28 7.5E-33 270.5 11.9 171 475-657 218-391 (495)
144 2eue_A Carbon catabolite derep 99.9 4.1E-28 1.4E-32 247.2 13.1 167 477-657 13-183 (275)
145 3gxj_A TGF-beta receptor type- 99.9 9.6E-29 3.3E-33 255.2 8.4 167 477-657 3-184 (303)
146 3cbl_A C-FES, proto-oncogene t 99.9 1E-28 3.6E-33 263.7 8.9 171 475-657 112-287 (377)
147 3pg1_A Mitogen-activated prote 99.9 4.3E-28 1.5E-32 257.3 13.4 182 468-657 13-205 (362)
148 2a2a_A Death-associated protei 99.9 4.2E-28 1.4E-32 253.1 12.9 169 476-657 11-190 (321)
149 3ork_A Serine/threonine protei 99.9 1.2E-28 4.2E-33 255.9 8.7 173 476-657 11-191 (311)
150 3g33_A Cell division protein k 99.9 6.7E-28 2.3E-32 249.9 14.1 176 475-657 7-191 (308)
151 1k9a_A Carboxyl-terminal SRC k 99.9 4E-28 1.4E-32 265.2 12.9 168 475-657 191-358 (450)
152 3is5_A Calcium-dependent prote 99.9 3.4E-28 1.2E-32 249.3 11.6 171 477-657 22-198 (285)
153 3kn6_A Ribosomal protein S6 ki 99.9 1E-27 3.5E-32 250.6 14.9 161 482-658 16-182 (325)
154 1o6v_A Internalin A; bacterial 99.9 1.5E-26 5.2E-31 254.1 24.7 257 74-359 46-303 (466)
155 2izr_A Casein kinase I isoform 99.9 3.9E-28 1.3E-32 254.3 11.4 167 476-657 8-189 (330)
156 3ttj_A Mitogen-activated prote 99.9 3.7E-28 1.3E-32 266.2 11.5 172 476-657 61-235 (464)
157 2ac3_A MAP kinase-interacting 99.9 9.7E-28 3.3E-32 249.5 14.0 168 477-657 12-193 (316)
158 3lb7_A RAF proto-oncogene seri 99.9 1.1E-27 3.8E-32 248.3 14.3 167 476-657 35-206 (307)
159 3pfq_A PKC-B, PKC-beta, protei 99.9 5.3E-28 1.8E-32 276.5 12.8 171 475-658 339-515 (674)
160 3tt0_A Basic fibroblast growth 99.9 5.3E-28 1.8E-32 258.7 12.1 173 475-657 67-265 (382)
161 1nxk_A MAP kinase-activated pr 99.9 6.5E-28 2.2E-32 259.4 12.7 170 477-658 61-236 (400)
162 3gni_B Strad alpha; kinase fol 99.9 6.6E-28 2.2E-32 258.6 12.7 171 476-657 24-207 (389)
163 3lij_A Calcium/calmodulin depe 99.9 5.5E-28 1.9E-32 267.5 12.4 169 476-657 36-210 (494)
164 2h6d_A 5'-AMP-activated protei 99.9 1E-27 3.5E-32 244.1 13.3 170 476-658 10-183 (276)
165 4f0f_A Serine/threonine-protei 99.9 2.3E-27 8E-32 243.1 15.9 166 476-657 18-198 (287)
166 3n9x_A Phosphotransferase; mal 99.9 5.2E-28 1.8E-32 263.0 11.6 173 476-657 25-223 (432)
167 3oz6_A Mitogen-activated prote 99.9 6.5E-28 2.2E-32 258.6 12.2 170 475-657 7-202 (388)
168 4fvq_A Tyrosine-protein kinase 99.9 3.3E-28 1.1E-32 249.6 9.4 167 476-657 7-189 (289)
169 3kk8_A Calcium/calmodulin depe 99.9 9.2E-28 3.1E-32 245.6 12.6 169 476-657 5-179 (284)
170 2y7j_A Phosphorylase B kinase 99.9 9.5E-28 3.2E-32 255.1 13.2 174 471-657 88-271 (365)
171 3l9p_A Anaplastic lymphoma kin 99.9 2.6E-28 8.9E-33 259.6 8.8 172 476-657 70-258 (367)
172 2z63_A TOLL-like receptor 4, v 99.9 8.8E-27 3E-31 262.3 21.8 120 101-220 46-166 (570)
173 1fmk_A C-SRC, P60-SRC, tyrosin 99.9 3.6E-28 1.2E-32 265.8 10.0 170 475-657 182-353 (452)
174 2clq_A Mitogen-activated prote 99.9 2.1E-27 7.2E-32 244.2 15.0 171 477-657 22-195 (295)
175 3mwu_A Calmodulin-domain prote 99.9 8.5E-28 2.9E-32 265.5 12.8 170 476-658 21-196 (486)
176 3cok_A Serine/threonine-protei 99.9 1.5E-27 5.1E-32 243.3 13.7 170 476-657 10-184 (278)
177 2ivs_A Proto-oncogene tyrosine 99.9 7.6E-28 2.6E-32 249.8 11.6 173 475-657 21-224 (314)
178 1rjb_A FL cytokine receptor; k 99.9 7.6E-28 2.6E-32 253.5 11.7 174 474-657 42-246 (344)
179 3q5i_A Protein kinase; CDPK, m 99.9 1.1E-27 3.6E-32 265.9 13.3 169 476-657 35-220 (504)
180 4agu_A Cyclin-dependent kinase 99.9 1E-27 3.5E-32 248.8 12.3 168 477-657 3-174 (311)
181 1u5q_A Serine/threonine protei 99.9 8.1E-28 2.8E-32 253.8 11.7 165 477-657 54-222 (348)
182 1vzo_A Ribosomal protein S6 ki 99.9 3.1E-28 1.1E-32 257.9 8.4 169 476-657 53-232 (355)
183 1jl5_A Outer protein YOPM; leu 99.9 3.6E-26 1.2E-30 249.7 25.0 225 107-357 131-371 (454)
184 2eva_A TAK1 kinase - TAB1 chim 99.9 7.5E-28 2.6E-32 249.6 11.1 167 477-657 8-175 (307)
185 3bhy_A Death-associated protei 99.9 1.1E-27 3.9E-32 244.8 12.2 168 477-657 5-183 (283)
186 2pml_X PFPK7, Ser/Thr protein 99.9 1.6E-27 5.4E-32 251.4 13.7 170 476-658 30-223 (348)
187 3oja_A Leucine-rich immune mol 99.9 3.3E-28 1.1E-32 268.4 8.7 233 105-351 32-270 (487)
188 3nyv_A Calmodulin-domain prote 99.9 8.6E-28 2.9E-32 265.3 11.9 169 476-657 25-200 (484)
189 3kmu_A ILK, integrin-linked ki 99.9 1.3E-27 4.6E-32 242.3 12.1 170 476-657 9-180 (271)
190 3poz_A Epidermal growth factor 99.9 5.7E-28 1.9E-32 252.8 9.6 168 477-657 15-191 (327)
191 3kfa_A Tyrosine-protein kinase 99.9 3.4E-28 1.2E-32 249.3 7.8 171 475-657 11-184 (288)
192 3lxl_A Tyrosine-protein kinase 99.9 6.9E-28 2.4E-32 252.1 10.1 171 477-657 23-202 (327)
193 3qup_A Tyrosine-protein kinase 99.9 3.5E-28 1.2E-32 253.7 7.7 182 472-657 18-211 (323)
194 2a19_B Interferon-induced, dou 99.9 9.6E-28 3.3E-32 245.2 10.7 174 476-657 10-193 (284)
195 2yex_A Serine/threonine-protei 99.9 3.4E-27 1.2E-31 240.2 14.8 170 476-658 6-180 (276)
196 4e5w_A Tyrosine-protein kinase 99.9 1.3E-27 4.4E-32 246.8 11.8 171 477-657 21-201 (302)
197 3hko_A Calcium/calmodulin-depe 99.9 5.5E-28 1.9E-32 254.6 9.1 175 473-657 22-246 (345)
198 3t9t_A Tyrosine-protein kinase 99.9 1.2E-27 4.3E-32 242.2 11.3 169 476-657 7-177 (267)
199 3mdy_A Bone morphogenetic prot 99.9 1.9E-27 6.3E-32 249.5 13.0 172 475-657 35-218 (337)
200 1t46_A HOMO sapiens V-KIT hard 99.9 1E-27 3.4E-32 248.8 10.7 173 475-657 21-219 (313)
201 1qpc_A LCK kinase; alpha beta 99.9 4.5E-28 1.6E-32 247.3 7.9 170 475-657 11-182 (279)
202 3kex_A Receptor tyrosine-prote 99.9 8.2E-28 2.8E-32 251.4 9.9 168 477-657 13-189 (325)
203 1mp8_A Focal adhesion kinase 1 99.9 1.1E-27 3.7E-32 244.9 10.6 169 476-657 14-189 (281)
204 1jl5_A Outer protein YOPM; leu 99.9 1.7E-25 5.7E-30 244.4 28.6 223 107-357 111-351 (454)
205 2rku_A Serine/threonine-protei 99.9 2.2E-27 7.6E-32 244.2 13.0 169 476-657 14-187 (294)
206 3g06_A SSPH2 (leucine-rich rep 99.9 2.8E-26 9.7E-31 258.5 23.1 268 49-358 12-299 (622)
207 2owb_A Serine/threonine-protei 99.9 1.5E-27 5.2E-32 250.5 11.7 169 476-657 40-213 (335)
208 3dbq_A Dual specificity protei 99.9 1.3E-27 4.6E-32 251.7 11.3 167 476-657 8-181 (343)
209 3dtc_A Mitogen-activated prote 99.9 1.4E-27 4.9E-32 242.4 11.1 169 476-657 6-186 (271)
210 2jam_A Calcium/calmodulin-depe 99.9 2.2E-27 7.6E-32 245.5 12.7 169 476-658 8-180 (304)
211 1p4o_A Insulin-like growth fac 99.9 2.9E-28 1E-32 254.1 6.1 180 468-657 16-212 (322)
212 2o6q_A Variable lymphocyte rec 99.9 4.1E-26 1.4E-30 232.0 21.7 166 56-237 2-168 (270)
213 2pvf_A Fibroblast growth facto 99.9 2E-27 6.7E-32 249.4 12.2 173 475-657 33-231 (334)
214 3g2f_A Bone morphogenetic prot 99.9 3.4E-27 1.2E-31 247.5 14.0 172 476-657 12-200 (336)
215 3o53_A Protein LRIM1, AGAP0063 99.9 3.2E-28 1.1E-32 253.6 6.1 241 103-357 30-277 (317)
216 2h34_A Serine/threonine-protei 99.9 3.6E-27 1.2E-31 244.7 13.8 170 476-658 33-208 (309)
217 3gbz_A Kinase, CMGC CDK; ssgci 99.9 8.7E-28 3E-32 251.7 9.1 170 474-657 31-209 (329)
218 3fdn_A Serine/threonine-protei 99.9 1.5E-27 5.1E-32 243.5 10.6 168 476-657 8-179 (279)
219 3c1x_A Hepatocyte growth facto 99.9 1.4E-27 4.8E-32 254.3 10.8 169 478-657 90-268 (373)
220 2h8h_A Proto-oncogene tyrosine 99.9 7.1E-28 2.4E-32 268.8 8.6 170 475-657 265-436 (535)
221 1ua2_A CAK, cell division prot 99.9 1.5E-27 5.3E-32 251.6 10.7 170 475-657 8-184 (346)
222 3eb0_A Putative uncharacterize 99.9 2.3E-27 7.9E-32 253.8 12.2 177 473-657 3-213 (383)
223 2zmd_A Dual specificity protei 99.9 2.2E-27 7.5E-32 254.5 12.0 166 477-657 56-228 (390)
224 3llt_A Serine/threonine kinase 99.9 1.1E-27 3.6E-32 254.1 9.3 176 467-657 25-231 (360)
225 1x8b_A WEE1HU, WEE1-like prote 99.9 3.3E-27 1.1E-31 241.5 12.6 169 476-657 10-202 (289)
226 1phk_A Phosphorylase kinase; g 99.9 2.2E-27 7.7E-32 244.5 11.4 170 475-657 15-195 (298)
227 1t4h_A Serine/threonine-protei 99.9 7.2E-27 2.4E-31 239.9 15.1 171 479-657 28-202 (290)
228 2ycf_A Serine/threonine-protei 99.9 1.6E-27 5.6E-32 248.7 10.3 168 476-657 9-188 (322)
229 3op5_A Serine/threonine-protei 99.9 1.2E-27 4.1E-32 254.2 9.5 173 476-657 34-233 (364)
230 2z62_A TOLL-like receptor 4, v 99.9 1.8E-26 6E-31 235.4 17.8 208 107-336 28-241 (276)
231 2buj_A Serine/threonine-protei 99.9 2.1E-27 7.3E-32 247.0 11.2 176 476-657 28-215 (317)
232 3f66_A Hepatocyte growth facto 99.9 3.3E-27 1.1E-31 243.3 12.4 170 477-657 25-204 (298)
233 2qr7_A Ribosomal protein S6 ki 99.9 1.6E-27 5.5E-32 250.9 10.1 165 476-657 21-192 (342)
234 1b6c_B TGF-B superfamily recep 99.9 3.4E-27 1.2E-31 248.1 12.6 171 473-657 38-223 (342)
235 3nsz_A CK II alpha, casein kin 99.9 4.4E-27 1.5E-31 246.0 13.4 165 476-657 35-202 (330)
236 3ll6_A Cyclin G-associated kin 99.9 1.8E-27 6.1E-32 249.4 10.3 180 476-657 27-222 (337)
237 2w1i_A JAK2; chromosomal rearr 99.9 3.1E-27 1.1E-31 247.0 12.1 172 476-657 40-220 (326)
238 2ozo_A Tyrosine-protein kinase 99.9 3.4E-27 1.1E-31 267.3 13.3 161 484-657 343-511 (613)
239 2j7t_A Serine/threonine-protei 99.9 1.6E-27 5.5E-32 246.0 9.8 170 476-657 18-189 (302)
240 2xir_A Vascular endothelial gr 99.9 1.5E-27 5.2E-32 247.8 9.3 181 468-657 18-222 (316)
241 3lm5_A Serine/threonine-protei 99.9 2.7E-27 9.3E-32 247.7 11.3 173 474-657 25-205 (327)
242 3og7_A AKAP9-BRAF fusion prote 99.9 2.9E-27 9.8E-32 242.9 11.3 167 476-657 23-194 (289)
243 3a7i_A MST3 kinase, serine/thr 99.9 7.3E-27 2.5E-31 241.4 14.4 168 476-657 21-191 (303)
244 1cm8_A Phosphorylated MAP kina 99.9 2.7E-27 9.1E-32 251.8 11.3 171 476-657 24-197 (367)
245 3mtl_A Cell division protein k 99.9 1.2E-27 4E-32 250.1 8.3 168 477-657 2-172 (324)
246 1fvr_A Tyrosine-protein kinase 99.9 4.3E-27 1.5E-31 246.0 12.6 171 477-657 25-213 (327)
247 3e3p_A Protein kinase, putativ 99.9 5.4E-27 1.8E-31 248.5 13.3 183 470-657 16-203 (360)
248 4aaa_A Cyclin-dependent kinase 99.9 4E-27 1.4E-31 246.8 12.1 169 476-657 24-196 (331)
249 3lxp_A Non-receptor tyrosine-p 99.9 6E-27 2E-31 244.0 13.3 167 479-657 33-209 (318)
250 4fl3_A Tyrosine-protein kinase 99.9 2.5E-27 8.5E-32 269.1 10.8 161 483-657 375-544 (635)
251 1j1b_A Glycogen synthase kinas 99.9 2.7E-27 9.3E-32 256.3 10.4 172 477-657 54-228 (420)
252 2vgo_A Serine/threonine-protei 99.9 5.4E-27 1.8E-31 240.1 12.1 167 477-657 14-184 (284)
253 2xrw_A Mitogen-activated prote 99.9 4.4E-27 1.5E-31 250.5 11.8 172 476-657 24-198 (371)
254 1csn_A Casein kinase-1; phosph 99.9 7.8E-27 2.7E-31 240.3 13.0 167 476-657 9-190 (298)
255 3mi9_A Cell division protein k 99.9 8.9E-27 3E-31 246.1 13.5 175 477-657 17-200 (351)
256 3eqc_A Dual specificity mitoge 99.9 2E-27 6.8E-32 252.0 8.4 169 476-657 32-202 (360)
257 1mqb_A Ephrin type-A receptor 99.9 7E-27 2.4E-31 245.2 11.9 169 477-657 44-222 (333)
258 1u59_A Tyrosine-protein kinase 99.9 9.4E-27 3.2E-31 238.7 12.4 168 477-657 9-185 (287)
259 4e7w_A Glycogen synthase kinas 99.9 3.5E-27 1.2E-31 253.3 9.6 173 477-657 40-213 (394)
260 1xbb_A Tyrosine-protein kinase 99.9 4E-27 1.4E-31 242.0 9.6 169 475-657 14-192 (291)
261 3qyz_A Mitogen-activated prote 99.9 7.2E-27 2.5E-31 248.2 11.8 172 476-657 26-203 (364)
262 3cc6_A Protein tyrosine kinase 99.9 4E-27 1.4E-31 240.6 9.4 169 476-657 11-186 (281)
263 1zy4_A Serine/threonine-protei 99.9 6.9E-27 2.3E-31 241.0 11.2 176 476-657 5-202 (303)
264 2i1m_A Macrophage colony-stimu 99.9 2.4E-27 8.2E-32 248.5 7.9 174 474-657 43-238 (333)
265 2w5a_A Serine/threonine-protei 99.9 2.8E-27 9.6E-32 241.3 8.1 174 476-657 5-188 (279)
266 3byv_A Rhoptry kinase; malaria 99.9 8.6E-28 2.9E-32 256.6 4.5 175 476-657 72-274 (377)
267 2r3i_A Cell division protein k 99.9 9.9E-27 3.4E-31 239.8 12.3 169 477-657 3-175 (299)
268 2wtk_C Serine/threonine-protei 99.9 1.8E-26 6.3E-31 238.5 14.0 172 476-657 4-183 (305)
269 3o53_A Protein LRIM1, AGAP0063 99.9 5.2E-27 1.8E-31 244.4 9.6 235 109-356 12-250 (317)
270 3brb_A Proto-oncogene tyrosine 99.9 1.3E-26 4.5E-31 240.7 12.6 180 473-657 30-221 (313)
271 3lzb_A Epidermal growth factor 99.9 9E-27 3.1E-31 243.7 11.4 169 476-657 14-191 (327)
272 4azs_A Methyltransferase WBDD; 99.9 3E-27 1E-31 264.6 8.2 159 484-658 241-412 (569)
273 3com_A Serine/threonine-protei 99.9 1.5E-26 5.1E-31 240.3 12.8 169 475-657 27-197 (314)
274 2vwi_A Serine/threonine-protei 99.9 4.2E-27 1.4E-31 242.9 8.5 174 474-657 12-198 (303)
275 1blx_A Cyclin-dependent kinase 99.9 1.2E-26 3.9E-31 242.4 11.6 176 475-657 9-191 (326)
276 3pls_A Macrophage-stimulating 99.9 1.5E-26 5.3E-31 238.1 12.4 168 479-657 23-200 (298)
277 2fst_X Mitogen-activated prote 99.9 5.5E-27 1.9E-31 249.2 9.3 171 476-657 28-201 (367)
278 2i6l_A Mitogen-activated prote 99.9 1.4E-26 4.6E-31 240.8 11.8 174 476-657 10-196 (320)
279 1byg_A CSK, protein (C-termina 99.9 4.1E-27 1.4E-31 240.2 7.5 167 476-657 20-186 (278)
280 3rgf_A Cyclin-dependent kinase 99.9 1.5E-26 5.1E-31 249.4 12.3 165 482-657 26-207 (405)
281 2wqm_A Serine/threonine-protei 99.9 1.9E-26 6.4E-31 239.1 12.6 172 476-657 31-208 (310)
282 2x7f_A TRAF2 and NCK-interacti 99.9 5E-27 1.7E-31 245.2 8.1 184 468-657 15-201 (326)
283 2pzi_A Probable serine/threoni 99.9 1E-26 3.6E-31 267.1 11.4 168 476-657 79-249 (681)
284 2b9h_A MAP kinase FUS3, mitoge 99.9 1.5E-26 5.1E-31 244.4 11.6 172 476-657 10-194 (353)
285 2yfx_A Tyrosine-protein kinase 99.9 1E-26 3.5E-31 243.1 10.1 172 476-657 29-217 (327)
286 3oja_A Leucine-rich immune mol 99.9 1.4E-26 4.9E-31 255.3 11.6 215 129-356 32-250 (487)
287 2wei_A Calmodulin-domain prote 99.9 1.6E-26 5.6E-31 236.9 11.2 169 476-657 21-195 (287)
288 2v62_A Serine/threonine-protei 99.9 8.2E-27 2.8E-31 245.9 9.2 172 476-657 36-232 (345)
289 3fme_A Dual specificity mitoge 99.9 1.1E-26 3.9E-31 238.1 10.0 172 476-657 6-181 (290)
290 3an0_A Dual specificity mitoge 99.9 1.7E-26 5.9E-31 242.7 11.4 173 475-657 49-225 (340)
291 3rfs_A Internalin B, repeat mo 99.9 1.3E-25 4.5E-30 228.5 16.2 206 105-342 39-245 (272)
292 2jii_A Serine/threonine-protei 99.9 7E-27 2.4E-31 247.1 6.5 166 476-657 41-240 (352)
293 4exu_A Mitogen-activated prote 99.9 2.8E-26 9.6E-31 244.3 11.0 170 476-657 41-213 (371)
294 3uzp_A CKI-delta, CKID, casein 99.9 3.5E-26 1.2E-30 235.2 11.1 168 476-657 8-187 (296)
295 3kvw_A DYRK2, dual specificity 99.9 3.3E-26 1.1E-30 248.4 11.3 167 476-657 96-271 (429)
296 4hgt_A Casein kinase I isoform 99.9 4.1E-26 1.4E-30 234.6 11.2 169 475-657 7-187 (296)
297 2z62_A TOLL-like receptor 4, v 99.9 9.2E-25 3.1E-29 222.6 20.9 207 131-358 28-239 (276)
298 2j0j_A Focal adhesion kinase 1 99.9 4E-26 1.4E-30 260.1 11.8 171 474-657 387-564 (656)
299 3coi_A Mitogen-activated prote 99.9 4.9E-26 1.7E-30 240.7 11.6 170 476-657 23-195 (353)
300 1u46_A ACK-1, activated CDC42 99.9 2.3E-26 7.8E-31 236.0 8.3 169 476-657 17-196 (291)
301 2o6q_A Variable lymphocyte rec 99.9 3.1E-24 1.1E-28 218.1 24.0 203 108-334 17-220 (270)
302 3q60_A ROP5B; pseudokinase, tr 99.9 1.3E-26 4.4E-31 246.9 6.4 173 476-657 61-263 (371)
303 3qa8_A MGC80376 protein; kinas 99.9 3.6E-26 1.2E-30 256.7 9.8 179 476-658 13-196 (676)
304 3aln_A Dual specificity mitoge 99.9 1.2E-25 4E-30 235.1 12.9 172 476-657 21-197 (327)
305 2iwi_A Serine/threonine-protei 99.9 1.9E-26 6.4E-31 239.4 6.4 171 473-657 27-210 (312)
306 2y4i_B KSR2, HKSR2, kinase sup 99.9 3.8E-26 1.3E-30 237.6 7.7 170 473-657 29-206 (319)
307 3p23_A Serine/threonine-protei 99.9 5.5E-26 1.9E-30 246.7 9.2 167 476-658 23-199 (432)
308 3a99_A Proto-oncogene serine/t 99.9 5.5E-26 1.9E-30 237.0 8.8 170 474-657 40-220 (320)
309 3sv0_A Casein kinase I-like; t 99.9 1.8E-25 6.2E-30 245.2 13.0 168 476-657 6-185 (483)
310 3cek_A Dual specificity protei 99.9 1.1E-25 3.6E-30 233.9 10.6 169 474-657 25-200 (313)
311 3fhr_A MAP kinase-activated pr 99.9 2.7E-25 9.2E-30 233.4 13.3 170 476-657 27-201 (336)
312 1z57_A Dual specificity protei 99.9 1.1E-25 3.9E-30 235.7 10.0 167 476-657 13-206 (339)
313 1p9a_G Platelet glycoprotein I 99.9 4.4E-24 1.5E-28 219.3 21.5 202 103-332 6-208 (290)
314 2rio_A Serine/threonine-protei 99.9 8.1E-26 2.8E-30 245.8 9.1 165 479-657 17-204 (434)
315 1wak_A Serine/threonine-protei 99.9 1E-25 3.4E-30 241.7 9.5 172 476-657 36-265 (397)
316 1p9a_G Platelet glycoprotein I 99.9 5.9E-24 2E-28 218.3 21.8 205 126-357 5-209 (290)
317 4glp_A Monocyte differentiatio 99.9 1E-24 3.5E-29 226.3 16.1 222 106-332 63-307 (310)
318 3rfs_A Internalin B, repeat mo 99.9 3.9E-24 1.3E-28 217.6 18.3 205 74-319 41-246 (272)
319 2dyl_A Dual specificity mitoge 99.9 2.9E-25 9.9E-30 230.8 10.2 169 476-657 24-196 (318)
320 2vx3_A Dual specificity tyrosi 99.9 3.8E-25 1.3E-29 236.5 10.7 169 476-657 53-230 (382)
321 3g06_A SSPH2 (leucine-rich rep 99.9 1.7E-23 5.7E-28 235.9 23.8 208 106-342 100-307 (622)
322 2eu9_A Dual specificity protei 99.9 6.2E-25 2.1E-29 231.8 10.2 167 476-657 18-211 (355)
323 3en9_A Glycoprotease, O-sialog 99.9 3E-25 1E-29 247.1 7.2 154 480-657 339-508 (540)
324 2xwt_C Thyrotropin receptor; s 99.9 1.4E-23 4.9E-28 209.1 17.6 195 108-329 32-236 (239)
325 1q8y_A SR protein kinase; tran 99.9 7.9E-25 2.7E-29 232.9 8.1 172 476-657 18-207 (373)
326 4glp_A Monocyte differentiatio 99.9 4E-24 1.4E-28 221.8 12.8 200 105-309 89-308 (310)
327 3m19_A Variable lymphocyte rec 99.9 2E-23 7E-28 209.6 17.5 190 57-285 3-193 (251)
328 3uqc_A Probable conserved tran 99.9 7.5E-24 2.6E-28 217.1 14.0 143 477-634 31-177 (286)
329 2ca6_A RAN GTPase-activating p 99.9 8.8E-26 3E-30 241.8 -1.7 236 101-357 26-317 (386)
330 1z7x_W Ribonuclease inhibitor; 99.9 4E-26 1.4E-30 250.1 -4.9 277 75-356 86-411 (461)
331 2xwt_C Thyrotropin receptor; s 99.9 5.5E-23 1.9E-27 204.8 18.1 197 131-353 31-236 (239)
332 2ast_B S-phase kinase-associat 99.9 9.9E-26 3.4E-30 236.4 -2.5 230 58-305 36-282 (336)
333 3m19_A Variable lymphocyte rec 99.9 1.4E-22 4.9E-27 203.5 20.4 179 132-334 15-194 (251)
334 3cvr_A Invasion plasmid antige 99.9 6.5E-24 2.2E-28 236.5 11.4 209 49-295 33-254 (571)
335 3goz_A Leucine-rich repeat-con 99.9 6.5E-25 2.2E-29 232.9 2.7 246 111-356 2-297 (362)
336 2ca6_A RAN GTPase-activating p 99.9 6.3E-25 2.2E-29 235.1 1.7 224 122-357 23-288 (386)
337 1h6u_A Internalin H; cell adhe 99.9 7.8E-23 2.7E-27 211.9 15.6 193 104-332 38-230 (308)
338 3goz_A Leucine-rich repeat-con 99.9 2E-24 6.7E-29 229.2 2.8 252 79-339 3-304 (362)
339 2o6s_A Variable lymphocyte rec 99.9 1.3E-22 4.6E-27 197.5 15.3 162 107-296 28-190 (208)
340 3m2w_A MAP kinase-activated pr 99.9 5.8E-23 2E-27 211.8 13.2 149 477-637 17-171 (299)
341 3dzo_A Rhoptry kinase domain; 99.9 5.2E-24 1.8E-28 230.0 5.3 175 476-657 77-279 (413)
342 1h6u_A Internalin H; cell adhe 99.9 1.3E-22 4.6E-27 210.1 15.7 191 74-309 41-231 (308)
343 1z7x_W Ribonuclease inhibitor; 99.9 2E-25 6.7E-30 244.6 -6.4 229 104-332 25-297 (461)
344 1zar_A RIO2 kinase; serine kin 99.9 1.4E-23 4.9E-28 214.2 7.5 143 469-636 82-242 (282)
345 3cvr_A Invasion plasmid antige 99.9 3E-22 1E-26 223.1 18.2 187 108-342 60-253 (571)
346 4ay9_X Follicle-stimulating ho 99.9 8.2E-22 2.8E-26 208.0 18.7 218 107-328 30-255 (350)
347 2ast_B S-phase kinase-associat 99.9 8.6E-24 2.9E-28 221.6 1.8 246 108-360 48-310 (336)
348 2o6s_A Variable lymphocyte rec 99.9 4.6E-21 1.6E-25 186.6 16.7 161 131-319 28-189 (208)
349 4ay9_X Follicle-stimulating ho 99.9 1.7E-20 5.7E-25 197.9 20.9 235 112-354 14-257 (350)
350 4b8c_D Glucose-repressible alc 99.8 2.5E-22 8.7E-27 231.4 2.4 225 28-281 129-369 (727)
351 3e6j_A Variable lymphocyte rec 99.8 2.4E-20 8.2E-25 184.5 15.5 164 50-241 10-174 (229)
352 1m9s_A Internalin B; cell inva 99.8 1.1E-20 3.6E-25 212.8 12.5 172 104-309 40-211 (605)
353 1m9s_A Internalin B; cell inva 99.8 2.2E-20 7.6E-25 210.2 11.5 190 109-334 23-212 (605)
354 1h6t_A Internalin B; cell adhe 99.8 8.3E-20 2.8E-24 187.4 14.6 105 128-239 43-147 (291)
355 1h6t_A Internalin B; cell adhe 99.8 9.7E-20 3.3E-24 186.9 13.8 173 103-309 42-214 (291)
356 2v9t_B SLIT homolog 2 protein 99.8 3.5E-19 1.2E-23 174.9 17.1 133 107-239 32-165 (220)
357 2xot_A Amphoterin-induced prot 99.8 1.7E-19 6E-24 191.0 15.0 139 68-221 15-154 (361)
358 2v9t_B SLIT homolog 2 protein 99.8 3.8E-19 1.3E-23 174.7 15.6 80 135-217 15-94 (220)
359 2v70_A SLIT-2, SLIT homolog 2 99.8 6.2E-19 2.1E-23 173.1 17.0 158 68-240 8-167 (220)
360 2xot_A Amphoterin-induced prot 99.8 1.1E-19 3.8E-24 192.5 12.5 175 110-308 21-202 (361)
361 2v70_A SLIT-2, SLIT homolog 2 99.8 6.9E-19 2.4E-23 172.8 16.0 134 182-336 35-170 (220)
362 3e6j_A Variable lymphocyte rec 99.8 9.9E-19 3.4E-23 172.8 16.9 81 135-218 23-103 (229)
363 1zth_A RIO1 serine protein kin 99.8 7.5E-20 2.6E-24 184.3 8.9 140 479-638 49-221 (258)
364 4b8c_D Glucose-repressible alc 99.8 2.8E-20 9.6E-25 214.4 5.4 215 107-357 173-405 (727)
365 1dce_A Protein (RAB geranylger 99.8 4.2E-22 1.4E-26 222.8 -10.2 201 128-349 346-566 (567)
366 4ezg_A Putative uncharacterize 99.8 6.5E-19 2.2E-23 169.8 12.7 106 105-214 42-147 (197)
367 3ogk_B Coronatine-insensitive 99.8 6.5E-21 2.2E-25 215.4 -3.4 132 225-356 377-526 (592)
368 1xeu_A Internalin C; cellular 99.8 3.3E-19 1.1E-23 180.1 8.3 171 129-334 17-187 (263)
369 4ezg_A Putative uncharacterize 99.8 1.7E-18 5.8E-23 166.9 12.7 153 127-308 40-194 (197)
370 1xeu_A Internalin C; cellular 99.8 3E-19 1E-23 180.4 7.5 171 105-310 17-187 (263)
371 3ogk_B Coronatine-insensitive 99.8 8.1E-21 2.8E-25 214.6 -5.4 227 128-356 217-476 (592)
372 1dce_A Protein (RAB geranylger 99.7 4.3E-21 1.5E-25 214.7 -11.9 189 152-359 346-549 (567)
373 1w8a_A SLIT protein; signaling 99.7 4.2E-18 1.4E-22 163.4 9.6 113 108-220 30-143 (192)
374 1w8a_A SLIT protein; signaling 99.7 1.5E-17 5.2E-22 159.5 12.2 131 110-243 11-143 (192)
375 2ell_A Acidic leucine-rich nuc 99.7 2.2E-17 7.6E-22 154.6 11.1 135 105-241 22-162 (168)
376 2je0_A Acidic leucine-rich nuc 99.7 2.6E-17 8.8E-22 150.9 7.1 129 105-235 15-149 (149)
377 2ell_A Acidic leucine-rich nuc 99.7 9E-17 3.1E-21 150.5 10.3 85 131-217 24-109 (168)
378 2o6r_A Variable lymphocyte rec 99.7 4.4E-16 1.5E-20 147.2 12.0 114 107-220 28-141 (177)
379 2wfh_A SLIT homolog 2 protein 99.7 1E-15 3.4E-20 146.9 14.5 106 132-238 32-138 (193)
380 4gyi_A RIO2 kinase; protein ki 99.6 1.1E-16 3.7E-21 167.9 6.6 145 471-636 89-265 (397)
381 2o6r_A Variable lymphocyte rec 99.6 1.8E-15 6.1E-20 142.9 14.1 130 110-242 10-140 (177)
382 2je0_A Acidic leucine-rich nuc 99.6 2.3E-16 7.7E-21 144.6 7.3 128 129-279 15-148 (149)
383 2p1m_B Transport inhibitor res 99.6 1.4E-17 5E-22 187.9 -3.3 274 74-355 130-493 (594)
384 2p1m_B Transport inhibitor res 99.6 4.3E-18 1.5E-22 192.3 -7.9 202 153-356 287-519 (594)
385 2wfh_A SLIT homolog 2 protein 99.6 5.5E-15 1.9E-19 141.8 14.7 128 229-357 13-140 (193)
386 1ds9_A Outer arm dynein; leuci 99.6 7.1E-18 2.4E-22 162.7 -7.3 147 130-301 17-180 (198)
387 3sb4_A Hypothetical leucine ri 99.6 3E-15 1E-19 156.2 11.6 236 106-350 48-328 (329)
388 1a9n_A U2A', U2A'; complex (nu 99.6 1.6E-15 5.4E-20 143.2 7.6 132 102-238 14-152 (176)
389 1a9n_A U2A', U2A'; complex (nu 99.6 3E-15 1E-19 141.2 7.5 86 127-216 15-101 (176)
390 1ds9_A Outer arm dynein; leuci 99.6 2.1E-17 7.1E-22 159.4 -7.6 137 151-312 14-157 (198)
391 3g39_A Variable lymphocyte rec 99.5 6.7E-14 2.3E-18 131.2 12.1 87 131-217 30-116 (170)
392 3g39_A Variable lymphocyte rec 99.5 1.1E-13 3.8E-18 129.7 12.4 109 228-336 11-119 (170)
393 2r9u_A Variable lymphocyte rec 99.5 1.3E-13 4.3E-18 129.9 12.1 87 131-217 33-119 (174)
394 3sb4_A Hypothetical leucine ri 99.5 1.1E-13 3.8E-18 144.3 9.5 238 74-326 49-328 (329)
395 2r9u_A Variable lymphocyte rec 99.4 4.1E-13 1.4E-17 126.3 12.4 106 229-334 15-120 (174)
396 4fdw_A Leucine rich hypothetic 99.4 6.6E-12 2.2E-16 134.2 20.4 238 107-356 113-358 (401)
397 4fdw_A Leucine rich hypothetic 99.4 1.9E-11 6.6E-16 130.5 18.9 243 102-356 131-383 (401)
398 2ifg_A High affinity nerve gro 99.3 3.1E-12 1.1E-16 134.2 10.8 66 127-192 27-93 (347)
399 2ifg_A High affinity nerve gro 99.3 5E-12 1.7E-16 132.6 11.1 102 135-239 12-116 (347)
400 3un9_A NLR family member X1; l 99.3 4.4E-14 1.5E-18 149.6 -7.9 110 107-216 72-196 (372)
401 3tm0_A Aminoglycoside 3'-phosp 99.2 2.1E-11 7.3E-16 122.4 11.2 148 473-636 10-214 (263)
402 3un9_A NLR family member X1; l 99.2 1.6E-13 5.4E-18 145.3 -6.7 73 268-340 180-260 (372)
403 1nd4_A Aminoglycoside 3'-phosp 99.2 4.9E-11 1.7E-15 119.3 9.3 131 486-637 29-216 (264)
404 3dxp_A Putative acyl-COA dehyd 99.0 4.7E-10 1.6E-14 118.2 10.4 146 482-637 43-250 (359)
405 2ra8_A Uncharacterized protein 98.9 3.4E-10 1.2E-14 118.8 3.9 40 270-309 278-321 (362)
406 2ra8_A Uncharacterized protein 98.9 2.2E-10 7.6E-15 120.3 1.3 85 269-354 250-341 (362)
407 4fs7_A Uncharacterized protein 98.9 2.9E-08 9.8E-13 105.8 16.9 220 124-353 155-376 (394)
408 4fs7_A Uncharacterized protein 98.8 4.8E-08 1.6E-12 104.1 17.1 242 102-353 66-353 (394)
409 3rw6_A Nuclear RNA export fact 98.7 1.2E-10 4E-15 116.4 -8.0 104 127-232 137-257 (267)
410 4gt6_A Cell surface protein; l 98.6 5.6E-06 1.9E-10 87.9 22.4 85 266-353 283-367 (394)
411 3d1u_A Putative fructosamine-3 98.5 5.8E-07 2E-11 91.2 13.0 142 482-636 20-217 (288)
412 1io0_A Tropomodulin; LRR prote 98.5 1.7E-08 5.8E-13 95.6 0.8 114 102-215 31-163 (185)
413 3rw6_A Nuclear RNA export fact 98.5 6.6E-09 2.2E-13 103.7 -2.1 80 128-209 167-257 (267)
414 3r70_A Aminoglycoside phosphot 98.5 4.3E-07 1.5E-11 93.7 11.3 139 478-638 38-240 (320)
415 3sg8_A APH(2'')-ID; antibiotic 98.4 3.7E-07 1.3E-11 93.5 8.7 141 482-637 25-225 (304)
416 1io0_A Tropomodulin; LRR prote 98.4 3.5E-08 1.2E-12 93.3 -0.4 116 123-238 28-163 (185)
417 4gt6_A Cell surface protein; l 98.4 2.5E-05 8.5E-10 82.9 20.9 244 103-353 59-344 (394)
418 4gkh_A Aminoglycoside 3'-phosp 98.3 3.7E-06 1.3E-10 84.2 11.0 137 484-637 31-225 (272)
419 3tdw_A Gentamicin resistance p 98.2 3.7E-06 1.3E-10 86.1 11.0 139 483-638 25-227 (306)
420 4h09_A Hypothetical leucine ri 98.2 7.9E-05 2.7E-09 78.4 21.2 240 102-351 64-341 (379)
421 3ats_A Putative uncharacterize 98.1 6.4E-06 2.2E-10 86.1 10.3 83 483-569 26-122 (357)
422 3ovc_A Hygromycin-B 4-O-kinase 98.1 1E-05 3.5E-10 84.9 10.4 145 481-637 45-245 (362)
423 4h09_A Hypothetical leucine ri 98.0 0.00045 1.5E-08 72.6 21.4 241 103-353 42-320 (379)
424 3f7w_A Putative fructosamine-3 97.8 6.2E-05 2.1E-09 76.1 10.1 76 481-567 19-97 (288)
425 2q83_A YTAA protein; 2635576, 97.7 7.8E-05 2.7E-09 77.1 9.7 148 483-636 38-253 (346)
426 2olc_A MTR kinase, methylthior 97.7 9.7E-05 3.3E-09 78.4 10.2 75 482-565 35-120 (397)
427 3e4g_A ATP synthase subunit S, 97.5 3.7E-05 1.3E-09 71.1 3.3 82 108-189 62-149 (176)
428 3e4g_A ATP synthase subunit S, 97.5 3.2E-05 1.1E-09 71.5 2.3 83 131-213 61-149 (176)
429 3jr1_A Putative fructosamine-3 97.5 0.0014 4.7E-08 66.9 14.3 138 482-631 41-232 (312)
430 2ppq_A HSK, HK, homoserine kin 97.1 0.001 3.5E-08 68.1 8.7 166 467-636 7-218 (322)
431 2pyw_A Uncharacterized protein 97.1 0.0014 4.9E-08 69.9 9.8 33 605-638 232-264 (420)
432 1zyl_A Hypothetical protein YI 97.0 0.0067 2.3E-07 62.0 13.2 148 483-636 32-224 (328)
433 1pgv_A TMD-1, tropomodulin TMD 96.8 0.0003 1E-08 66.3 1.6 87 103-189 37-136 (197)
434 1nw1_A Choline kinase (49.2 KD 96.8 0.003 1E-07 67.5 9.4 72 483-567 79-159 (429)
435 3csv_A Aminoglycoside phosphot 96.8 0.0078 2.7E-07 61.8 11.8 34 604-637 182-219 (333)
436 3rfe_A Platelet glycoprotein I 96.6 0.0029 9.8E-08 55.5 6.3 54 230-283 12-67 (130)
437 3dxq_A Choline/ethanolamine ki 96.6 0.0044 1.5E-07 62.7 8.7 140 482-637 23-204 (301)
438 1pgv_A TMD-1, tropomodulin TMD 96.6 0.00055 1.9E-08 64.4 1.2 88 126-213 36-136 (197)
439 2qg7_A Ethanolamine kinase PV0 96.5 0.012 4.1E-07 63.2 11.7 73 483-567 114-188 (458)
440 3feg_A Choline/ethanolamine ki 96.5 0.0099 3.4E-07 62.2 10.4 142 483-636 56-255 (379)
441 3rfe_A Platelet glycoprotein I 96.5 0.0036 1.2E-07 54.8 5.9 34 181-214 33-66 (130)
442 3c5i_A Choline kinase; choline 96.1 0.0073 2.5E-07 63.0 7.0 73 483-567 39-121 (369)
443 3i1a_A Spectinomycin phosphotr 95.8 0.071 2.4E-06 54.8 12.5 34 604-637 205-238 (339)
444 2ks1_B Epidermal growth factor 94.9 0.017 5.8E-07 39.4 2.9 32 389-420 10-41 (44)
445 2l2t_A Receptor tyrosine-prote 94.7 0.017 5.9E-07 39.2 2.3 30 391-420 11-40 (44)
446 3f2s_A CK, chetk-alpha, cholin 94.5 0.095 3.2E-06 55.0 8.8 33 604-636 243-281 (401)
447 3mes_A Choline kinase; malaria 93.5 0.3 1E-05 51.6 10.5 73 483-567 76-157 (424)
448 2jwa_A Receptor tyrosine-prote 89.7 0.18 6.2E-06 34.2 2.2 10 410-419 31-40 (44)
449 2k1k_A Ephrin type-A receptor 86.2 0.34 1.2E-05 31.9 1.9 26 391-416 11-37 (38)
450 3cxl_A N-chimerin; SH2, RHO-GA 85.1 0.12 4.2E-06 55.4 -1.1 60 482-544 147-215 (463)
451 3g15_A CK, chetk-alpha, cholin 78.9 0.86 3E-05 47.7 2.6 30 607-636 246-281 (401)
452 4ann_A ESSB; membrane protein, 76.5 8.4 0.00029 36.2 8.3 87 531-636 43-129 (215)
453 4ano_A ESSB; membrane protein, 74.5 12 0.00043 35.1 9.0 74 552-636 60-134 (219)
454 1iij_A ERBB-2 receptor protein 67.3 0.6 2.1E-05 29.9 -1.2 6 412-417 29-34 (35)
455 2l34_A TYRO protein tyrosine k 44.2 14 0.00046 23.4 2.1 25 392-416 8-32 (33)
456 2klu_A T-cell surface glycopro 41.5 28 0.00097 25.5 3.7 19 395-413 12-30 (70)
457 2knc_B Integrin beta-3; transm 39.7 18 0.00061 28.0 2.7 18 395-412 12-29 (79)
458 2l9u_A Receptor tyrosine-prote 38.0 19 0.00064 22.6 2.0 24 395-418 11-34 (40)
459 2lz0_A Uncharacterized protein 32.1 90 0.0031 25.0 6.0 42 122-164 11-52 (100)
460 2lz0_A Uncharacterized protein 28.6 1.2E+02 0.0041 24.2 6.2 39 148-187 13-51 (100)
461 2k9j_B Integrin beta-3; transm 28.4 37 0.0013 22.8 2.4 19 395-413 11-29 (43)
462 2llm_A Amyloid beta A4 protein 21.7 29 0.00099 23.1 0.0 9 408-416 34-42 (43)
No 1
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.5e-44 Score=376.50 Aligned_cols=293 Identities=29% Similarity=0.434 Sum_probs=240.0
Q ss_pred CCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCc--CCCCCCCceEeCC----CCEeEEEeCCCCCCC--CCCCCCcCCc
Q 006145 27 QLQSSQAQTLLRIQGLLNNPAVLSSWNITTEFCN--TEPTSSLTVVCYE----ESITQLHIVGNKRAP--MLPLSFSMDS 98 (659)
Q Consensus 27 ~~~~~~~~aLl~~k~~l~~~~~l~~W~~~~~~C~--w~~~~~~gv~C~~----~~v~~L~l~~~~~~~--~l~~~~~~~~ 98 (659)
.|.++|++||++||+++.+|..+++|+.+++||. |. ||+|+. ++|+.|+|+++.+.+ .+|
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~~w~-----gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~------- 69 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWL-----GVLCDTDTQTYRVNNLDLSGLNLPKPYPIP------- 69 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCST-----TEEECCSSSCCCEEEEEEECCCCSSCEECC-------
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCCcCCCc-----ceEeCCCCCCceEEEEECCCCCccCCcccC-------
Confidence 5899999999999999988878899988889998 86 799964 689999999988876 444
Q ss_pred ccccccCCCCCCEEEecC-CCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCC
Q 006145 99 FVTTLVKLPDLKVLRLVS-LGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGS 177 (659)
Q Consensus 99 ~~~~l~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 177 (659)
..+.++++|++|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..|.++++|++|+|++|.+++.+|..+..
T Consensus 70 --~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 147 (313)
T 1ogq_A 70 --SSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISS 147 (313)
T ss_dssp --GGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGG
T ss_pred --hhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhc
Confidence 4677889999999995 8899899999999999999999999999889999999999999999999998889999999
Q ss_pred CCCCCEEEccCCcCCccCCcccCCCC-CCcEEeccccccccCCCC-CCCCCcCCEEEcccCCCCCCCCCCCcccceEecC
Q 006145 178 LPILAVLSLRNNMFNGTLPDSFSYLE-NLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILS 255 (659)
Q Consensus 178 l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~ 255 (659)
+++|++|+|++|.+++.+|..++.++ +|+.|++++|++++.+|. +..++ |++|+|++|.
T Consensus 148 l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~------------------ 208 (313)
T 1ogq_A 148 LPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM------------------ 208 (313)
T ss_dssp CTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE------------------
T ss_pred CCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc------------------
Confidence 99999999999999988998898887 899999999998877765 66554 6666665555
Q ss_pred CCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccC
Q 006145 256 KNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQL 335 (659)
Q Consensus 256 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~i 335 (659)
+++.+|..+..+++|+.|+|++|++++.+|. +..+++|++|++++|++++.+|..+..+++|+.|++++|+++|.+
T Consensus 209 ---l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~i 284 (313)
T 1ogq_A 209 ---LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI 284 (313)
T ss_dssp ---EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEEC
T ss_pred ---ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccC
Confidence 4556666777777777777777777766555 677777777777777777777777777777778888888777777
Q ss_pred ChhhhCCCCCCEEEcCCcc-ccC
Q 006145 336 PNCLLAGSKNRVVLYARNC-LAA 357 (659)
Q Consensus 336 p~~~~~~~~l~~l~~~~N~-l~~ 357 (659)
|.. ..+++++.+++.+|. ++|
T Consensus 285 p~~-~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 285 PQG-GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp CCS-TTGGGSCGGGTCSSSEEES
T ss_pred CCC-ccccccChHHhcCCCCccC
Confidence 776 566677777777776 443
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=8.7e-43 Score=406.63 Aligned_cols=327 Identities=26% Similarity=0.328 Sum_probs=225.9
Q ss_pred cCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcCCCCCCCceEeCCCCEeEEEeCCCCCCCC---CCCCCc-------
Q 006145 26 EQLQSSQAQTLLRIQGLLNNPAVLSSWNITTEFCNTEPTSSLTVVCYEESITQLHIVGNKRAPM---LPLSFS------- 95 (659)
Q Consensus 26 ~~~~~~~~~aLl~~k~~l~~~~~l~~W~~~~~~C~w~~~~~~gv~C~~~~v~~L~l~~~~~~~~---l~~~~~------- 95 (659)
.++.++|++||++||+++.||..+++|+.++|||+|. ||+|+.++|+.|+|+++.+.|. +|..+.
T Consensus 7 ~~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C~w~-----gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~ 81 (768)
T 3rgz_A 7 SQSLYREIHQLISFKDVLPDKNLLPDWSSNKNPCTFD-----GVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLES 81 (768)
T ss_dssp -CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGGGST-----TEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCE
T ss_pred ccCCHHHHHHHHHHHhhCCCcccccCCCCCCCCcCCc-----ceEECCCcEEEEECCCCCcCCccCccChhHhccCcccc
Confidence 3456889999999999998887899999888999997 6999988999999999988775 443111
Q ss_pred -------CCcccccccCCCCCCEEEecCCCCcCCCCc--ccCCCCCCcEEEcccCcCcccCChhc-cCCCCCcEEEeecC
Q 006145 96 -------MDSFVTTLVKLPDLKVLRLVSLGLWGPLSG--KISRLSSLEILNMSSNFLNGAIPQEL-SILTSLQTLILDEN 165 (659)
Q Consensus 96 -------~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N 165 (659)
...+|..+.++++|++|+|++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .++++|++|+|++|
T Consensus 82 l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n 161 (768)
T 3rgz_A 82 LFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSAN 161 (768)
T ss_dssp EECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSS
T ss_pred cCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCC
Confidence 112336788888999999999998888888 88888888888888888888887765 77888888888888
Q ss_pred CCCCCCccc---cCCCCCCCEEEccCCcCCcc----------------------CCcccCCCCCCcEEeccccccccCCC
Q 006145 166 MLAGRVPDW---LGSLPILAVLSLRNNMFNGT----------------------LPDSFSYLENLRVLALSNNHFYGEVP 220 (659)
Q Consensus 166 ~l~~~~p~~---l~~l~~L~~L~L~~N~l~~~----------------------~p~~~~~l~~L~~L~Ls~N~l~~~~p 220 (659)
++++..|.. +.++++|++|++++|.+++. +|. ++++++|++|+|++|++++.+|
T Consensus 162 ~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~ 240 (768)
T 3rgz_A 162 SISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFS 240 (768)
T ss_dssp CCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHH
T ss_pred ccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCccc
Confidence 887777665 55555555555555555544 443 4444444444444444444433
Q ss_pred C-CCCCCcCCEEEcccCCCCCCCCCC-CcccceEecCCCcCCccCchhccCC-ccccEEeccCcccccCCchhhcCCCcc
Q 006145 221 D-FSGLTYLQVLDLENNALGPQFPKV-GKKLVTMILSKNKFRSAIPAEVSSY-YQLQRLDLSSNRFVGPFPQALLSLPSI 297 (659)
Q Consensus 221 ~-~~~l~~L~~L~L~~N~l~~~~~~~-~~~L~~L~l~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L 297 (659)
. +..+++|++|+|++|.+.+.+|.. +++|++|++++|++++.+|..+... ++|++|+|++|++++.+|..++.+++|
T Consensus 241 ~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L 320 (768)
T 3rgz_A 241 RAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLL 320 (768)
T ss_dssp HHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTC
T ss_pred HHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCc
Confidence 2 444445555555555544444432 3556666666666666666666554 667777777777766666666677777
Q ss_pred cEEeccCCcCCCcCCcC-CCCCCCCCEEECcCCCCcccCChhhhCCC-CCCEEEcCCccccCC
Q 006145 298 TYLNIADNKLTGKLFDD-LSCNPELGFVDLSSNLLTGQLPNCLLAGS-KNRVVLYARNCLAAG 358 (659)
Q Consensus 298 ~~L~l~~N~l~~~~p~~-~~~~~~L~~L~ls~N~l~g~ip~~~~~~~-~l~~l~~~~N~l~~~ 358 (659)
++|++++|+++|.+|.. +..+++|+.|++++|+++|.+|..+..+. +++.+++++|.+++.
T Consensus 321 ~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~ 383 (768)
T 3rgz_A 321 ESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGP 383 (768)
T ss_dssp CEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEE
T ss_pred cEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCC
Confidence 77777777776666654 66666777777777777766776666665 667777777766653
No 3
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=6.7e-40 Score=373.98 Aligned_cols=314 Identities=20% Similarity=0.292 Sum_probs=274.1
Q ss_pred CHHHHHHHHHHHhcCCCCC---------CCCCCCCCCCCCcCCCCCCCceEeC-CCCEeEEEeCCCCCCCCCCCCCcCCc
Q 006145 29 QSSQAQTLLRIQGLLNNPA---------VLSSWNITTEFCNTEPTSSLTVVCY-EESITQLHIVGNKRAPMLPLSFSMDS 98 (659)
Q Consensus 29 ~~~~~~aLl~~k~~l~~~~---------~l~~W~~~~~~C~w~~~~~~gv~C~-~~~v~~L~l~~~~~~~~l~~~~~~~~ 98 (659)
...|++||.+++..+..+. ...+|+.+++||.|. .+.||+|+ .++|++|+|+++++.|.+|
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~--~~~GV~C~~~~~V~~L~L~~~~l~g~lp------- 98 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWG--AQPGVSLNSNGRVTGLSLEGFGASGRVP------- 98 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTT--CCTTEEECTTCCEEEEECTTSCCEEEEC-------
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCccccc--CCCCeEEcCCCCEEEEEecCcccCCcCC-------
Confidence 3568999999999886542 234799889999992 12379995 4799999999999887665
Q ss_pred ccccccCCCCCCEEEecCCC------------------------------------------------------------
Q 006145 99 FVTTLVKLPDLKVLRLVSLG------------------------------------------------------------ 118 (659)
Q Consensus 99 ~~~~l~~l~~L~~L~L~~n~------------------------------------------------------------ 118 (659)
+.+++|++|++|+|++|.
T Consensus 99 --~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~ 176 (636)
T 4eco_A 99 --DAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIK 176 (636)
T ss_dssp --GGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCC
T ss_pred --hHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccc
Confidence 478899999999999884
Q ss_pred ------------------CcCCCCcccCCCCCCcEEEcccCcCccc-----------------CChhcc--CCCCCcEEE
Q 006145 119 ------------------LWGPLSGKISRLSSLEILNMSSNFLNGA-----------------IPQELS--ILTSLQTLI 161 (659)
Q Consensus 119 ------------------l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~~L~~L~ 161 (659)
++| +|..|+++++|++|+|++|.++|. +|..++ ++++|++|+
T Consensus 177 ~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~ 255 (636)
T 4eco_A 177 KSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVE 255 (636)
T ss_dssp CCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEE
T ss_pred cccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEE
Confidence 445 788999999999999999999986 999999 999999999
Q ss_pred eecCCCCCCCccccCCCCCCCEEEccCCc-CCc-cCCcccCCC------CCCcEEeccccccccCCC--CCCCCCcCCEE
Q 006145 162 LDENMLAGRVPDWLGSLPILAVLSLRNNM-FNG-TLPDSFSYL------ENLRVLALSNNHFYGEVP--DFSGLTYLQVL 231 (659)
Q Consensus 162 Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~-~~p~~~~~l------~~L~~L~Ls~N~l~~~~p--~~~~l~~L~~L 231 (659)
|++|++.+.+|..|+++++|++|+|++|+ ++| .+|..++++ ++|++|+|++|+++..++ .+.++++|++|
T Consensus 256 L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L 335 (636)
T 4eco_A 256 VYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGML 335 (636)
T ss_dssp EECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEE
T ss_pred ecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCCEE
Confidence 99999999999999999999999999998 998 899988887 999999999999994444 49999999999
Q ss_pred EcccCCCCCCCCCC--CcccceEecCCCcCCccCchhccCCcc-ccEEeccCcccccCCchhhcCCC--cccEEeccCCc
Q 006145 232 DLENNALGPQFPKV--GKKLVTMILSKNKFRSAIPAEVSSYYQ-LQRLDLSSNRFVGPFPQALLSLP--SITYLNIADNK 306 (659)
Q Consensus 232 ~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~l~~l~--~L~~L~l~~N~ 306 (659)
++++|.++|.+|.. +++|+.|++++|+++ .+|..+..+++ |+.|++++|.++ .+|..+..++ +|+.|++++|+
T Consensus 336 ~L~~N~l~g~ip~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~ 413 (636)
T 4eco_A 336 ECLYNQLEGKLPAFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNE 413 (636)
T ss_dssp ECCSCCCEEECCCCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSC
T ss_pred eCcCCcCccchhhhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCc
Confidence 99999999888843 478999999999998 78999999999 999999999999 7898887765 89999999999
Q ss_pred CCCcCCcCCC-------CCCCCCEEECcCCCCcccCChhhh-CCCCCCEEEcCCccccC
Q 006145 307 LTGKLFDDLS-------CNPELGFVDLSSNLLTGQLPNCLL-AGSKNRVVLYARNCLAA 357 (659)
Q Consensus 307 l~~~~p~~~~-------~~~~L~~L~ls~N~l~g~ip~~~~-~~~~l~~l~~~~N~l~~ 357 (659)
+++.+|..+. .+++|+.|++++|+++ .+|..+. .+++++.+++++|.++.
T Consensus 414 l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~~ 471 (636)
T 4eco_A 414 IGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLTE 471 (636)
T ss_dssp TTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCSB
T ss_pred CCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCCC
Confidence 9999999888 7889999999999999 6676554 58899999999999883
No 4
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=4.5e-39 Score=374.40 Aligned_cols=314 Identities=20% Similarity=0.257 Sum_probs=263.0
Q ss_pred CCCHHHHHHHHHHHhcCCCCCCCCCCCCCC-----CC--CcCCC----CCC---CceEeC-CCCEeEEEeCCCCCCCCCC
Q 006145 27 QLQSSQAQTLLRIQGLLNNPAVLSSWNITT-----EF--CNTEP----TSS---LTVVCY-EESITQLHIVGNKRAPMLP 91 (659)
Q Consensus 27 ~~~~~~~~aLl~~k~~l~~~~~l~~W~~~~-----~~--C~w~~----~~~---~gv~C~-~~~v~~L~l~~~~~~~~l~ 91 (659)
++..+|++||++||.++.+| +|+.+. +| |.|+- ..| .||.|+ .++|++|+|+++++.|.+|
T Consensus 265 ~~~~~d~~ALl~~k~~l~~~----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip 340 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALDGK----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVP 340 (876)
T ss_dssp CHHHHHHHHHHHHHHHTTGG----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEEC
T ss_pred ccchHHHHHHHHHHHHcCCC----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCc
Confidence 34567999999999999876 787554 66 99911 112 489997 5899999999999887665
Q ss_pred CCCcCCcccccccCCCCCCEEEe-cCCCCcCC------------------------------------------------
Q 006145 92 LSFSMDSFVTTLVKLPDLKVLRL-VSLGLWGP------------------------------------------------ 122 (659)
Q Consensus 92 ~~~~~~~~~~~l~~l~~L~~L~L-~~n~l~~~------------------------------------------------ 122 (659)
. .+++|++|++|+| ++|.++|.
T Consensus 341 ~---------~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~ 411 (876)
T 4ecn_A 341 D---------AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRN 411 (876)
T ss_dssp G---------GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTC
T ss_pred h---------HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhC
Confidence 4 6789999999999 77755444
Q ss_pred ----------------------------CCcccCCCCCCcEEEcccCcCcc-----------------cCChhcc--CCC
Q 006145 123 ----------------------------LSGKISRLSSLEILNMSSNFLNG-----------------AIPQELS--ILT 155 (659)
Q Consensus 123 ----------------------------~p~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~~~--~l~ 155 (659)
+|..|++|++|++|+|++|.|+| .+|..++ +++
T Consensus 412 ~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~ 491 (876)
T 4ecn_A 412 PEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLK 491 (876)
T ss_dssp TTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCT
T ss_pred ccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCC
Confidence 78889999999999999999998 4898887 999
Q ss_pred CCcEEEeecCCCCCCCccccCCCCCCCEEEccCCc-CCc-cCCcccCCCC-------CCcEEeccccccccCCC--CCCC
Q 006145 156 SLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM-FNG-TLPDSFSYLE-------NLRVLALSNNHFYGEVP--DFSG 224 (659)
Q Consensus 156 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~-~~p~~~~~l~-------~L~~L~Ls~N~l~~~~p--~~~~ 224 (659)
+|++|+|++|++.+.+|..|+++++|+.|+|++|+ ++| .+|..+++++ +|+.|+|++|+++..++ .+.+
T Consensus 492 ~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~~ 571 (876)
T 4ecn_A 492 DLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQK 571 (876)
T ss_dssp TCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHTT
T ss_pred CCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhhhhc
Confidence 99999999999999999999999999999999998 998 8888766655 99999999999994444 4899
Q ss_pred CCcCCEEEcccCCCCCCCCCC--CcccceEecCCCcCCccCchhccCCcc-ccEEeccCcccccCCchhhcCCCc--ccE
Q 006145 225 LTYLQVLDLENNALGPQFPKV--GKKLVTMILSKNKFRSAIPAEVSSYYQ-LQRLDLSSNRFVGPFPQALLSLPS--ITY 299 (659)
Q Consensus 225 l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~l~~l~~--L~~ 299 (659)
+++|+.|+|++|.++ .+|.. +++|+.|+|++|+++ .+|..+..+++ |+.|+|++|+++ .+|..+..++. |+.
T Consensus 572 L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~ 648 (876)
T 4ecn_A 572 MVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGS 648 (876)
T ss_dssp CTTCCEEECTTSCCC-BCCCCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEE
T ss_pred CCCCCEEECCCCCcc-cchhhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCE
Confidence 999999999999998 66643 478999999999998 78888999998 999999999998 78888877754 999
Q ss_pred EeccCCcCCCcCCcCC---C--CCCCCCEEECcCCCCcccCChhhh-CCCCCCEEEcCCccccC
Q 006145 300 LNIADNKLTGKLFDDL---S--CNPELGFVDLSSNLLTGQLPNCLL-AGSKNRVVLYARNCLAA 357 (659)
Q Consensus 300 L~l~~N~l~~~~p~~~---~--~~~~L~~L~ls~N~l~g~ip~~~~-~~~~l~~l~~~~N~l~~ 357 (659)
|+|++|+++|.+|... . .+++|+.|++++|+++ .+|..+. .+++|+.+++++|.++.
T Consensus 649 L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~ 711 (876)
T 4ecn_A 649 VDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTS 711 (876)
T ss_dssp EECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSC
T ss_pred EECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCCc
Confidence 9999999998776432 2 3458999999999999 7787765 77899999999998873
No 5
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=4.1e-39 Score=331.13 Aligned_cols=171 Identities=23% Similarity=0.430 Sum_probs=145.3
Q ss_pred cCCCCCceeccCcCceEEEEEec------CCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCC
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 550 (659)
++|...+.||+|+||+||+|++. ++..||||+++.......++|.+|+++|++++|||||+++|+|.+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~------ 86 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE------ 86 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEee------
Confidence 45677799999999999999864 478999999986554455789999999999999999999999986
Q ss_pred CCceeEEEEeccCCCChhhhhcCC----------CCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeec
Q 006145 551 SVSRIFLIFEYVPNGTLRSWISEG----------HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620 (659)
Q Consensus 551 ~~~~~~lV~Ey~~~GsL~~~l~~~----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld 620 (659)
.+..|||||||++|||.++|+.. .....++|.++.+|+.|||+||+|||+. +||||||||+|||+|
T Consensus 87 -~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~ 162 (299)
T 4asz_A 87 -GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVG 162 (299)
T ss_dssp -SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred -CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEEC
Confidence 46789999999999999999742 1235799999999999999999999998 999999999999999
Q ss_pred CCcceEEccCccccccccccc---cceecccccccCCCCC
Q 006145 621 QNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 621 ~~~~~kl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~ 657 (659)
+++.+||+|||+|+....... .....||+.|||||++
T Consensus 163 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~ 202 (299)
T 4asz_A 163 ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESI 202 (299)
T ss_dssp GGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHH
T ss_pred CCCcEEECCcccceecCCCCceeecCceecChhhcCHHHH
Confidence 999999999999986643322 2346799999999975
No 6
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=9.4e-39 Score=332.99 Aligned_cols=172 Identities=23% Similarity=0.381 Sum_probs=140.7
Q ss_pred cCCCCCceeccCcCceEEEEEec------CCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCC
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 550 (659)
++|...++||+|+||+||+|+++ +++.||||+++.......++|.+|+++|++++|||||+++|+|.+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~------ 114 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE------ 114 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE------
Confidence 45666789999999999999864 478999999986554455789999999999999999999999986
Q ss_pred CCceeEEEEeccCCCChhhhhcCCCC------------CCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCcee
Q 006145 551 SVSRIFLIFEYVPNGTLRSWISEGHA------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618 (659)
Q Consensus 551 ~~~~~~lV~Ey~~~GsL~~~l~~~~~------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIL 618 (659)
.+..|||||||++|+|.++++.... ..+++|.++++|+.|||+||+|||+. +||||||||+|||
T Consensus 115 -~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NIL 190 (329)
T 4aoj_A 115 -GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCL 190 (329)
T ss_dssp -SSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred -CCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEE
Confidence 4678999999999999999975321 24699999999999999999999998 9999999999999
Q ss_pred ecCCcceEEccCcccccccccc---ccceecccccccCCCCCC
Q 006145 619 LDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSA 658 (659)
Q Consensus 619 ld~~~~~kl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~~ 658 (659)
+|+++.+||+|||+|+...... .....+||+.|||||++.
T Consensus 191 l~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~ 233 (329)
T 4aoj_A 191 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL 233 (329)
T ss_dssp EETTTEEEECCCC----------------CCCCGGGCCHHHHT
T ss_pred ECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhc
Confidence 9999999999999998664322 224578999999999753
No 7
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-38 Score=324.51 Aligned_cols=168 Identities=20% Similarity=0.340 Sum_probs=141.0
Q ss_pred hhcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCC--chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 475 ~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
..+++...+.||+|+||+||+|+++. .||||+++..... ..++|.+|+++|++++|||||+++|+|.+
T Consensus 34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-------- 103 (307)
T 3omv_A 34 EASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-------- 103 (307)
T ss_dssp CTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--------
T ss_pred cHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC--------
Confidence 34667788999999999999999753 6999999754432 23679999999999999999999999863
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
+..+||||||++|+|.++|+.. ...++|.++..|+.|||+||+|||+. +||||||||+|||+|+++.+||+|||+
T Consensus 104 ~~~~iVmEy~~gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGl 178 (307)
T 3omv_A 104 DNLAIVTQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGL 178 (307)
T ss_dssp SSCEEEEECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSS
T ss_pred CeEEEEEEcCCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccC
Confidence 3579999999999999999753 34699999999999999999999998 999999999999999999999999999
Q ss_pred ccccccc---cccceecccccccCCCCC
Q 006145 633 PLLAENA---EKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~---~~~~~~~gt~~y~aPE~~ 657 (659)
|+..... ......+||+.|||||++
T Consensus 179 a~~~~~~~~~~~~~~~~GT~~ymAPE~l 206 (307)
T 3omv_A 179 ATVKSRWSGSQQVEQPTGSVLWMAPEVI 206 (307)
T ss_dssp CBC------------CCCCTTSCCHHHH
T ss_pred ceecccCCcceeecccccCCCccCHHHh
Confidence 9876432 234567899999999975
No 8
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.1e-37 Score=361.19 Aligned_cols=287 Identities=30% Similarity=0.430 Sum_probs=217.2
Q ss_pred CCEeEEEeCCCCCCCCCCCCCc------------C----CcccccccC--CCCCCEEEecCCCCcCCCCcccCCCCCCcE
Q 006145 74 ESITQLHIVGNKRAPMLPLSFS------------M----DSFVTTLVK--LPDLKVLRLVSLGLWGPLSGKISRLSSLEI 135 (659)
Q Consensus 74 ~~v~~L~l~~~~~~~~l~~~~~------------~----~~~~~~l~~--l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 135 (659)
.+++.|++++|.+.+.+|..+. . +.++..+.. +++|++|+|++|.+++.+|..|+++++|++
T Consensus 343 ~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 422 (768)
T 3rgz_A 343 RGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVS 422 (768)
T ss_dssp TTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCE
T ss_pred CCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCE
Confidence 3567777777776655554221 0 112333333 566777777777777777777777777777
Q ss_pred EEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEecccccc
Q 006145 136 LNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHF 215 (659)
Q Consensus 136 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 215 (659)
|+|++|.+++.+|..+.++++|++|+|++|.+++.+|..++.+++|++|+|++|++++.+|..++++++|++|+|++|++
T Consensus 423 L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 502 (768)
T 3rgz_A 423 LHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRL 502 (768)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred EECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCcc
Confidence 77777777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred ccCCCC-CCCCCcCCEEEcccCCCCCCCCCC---CcccceEecCCCcCCccCch--------------------------
Q 006145 216 YGEVPD-FSGLTYLQVLDLENNALGPQFPKV---GKKLVTMILSKNKFRSAIPA-------------------------- 265 (659)
Q Consensus 216 ~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~-------------------------- 265 (659)
++.+|. ++.+++|++|+|++|.+++.+|.. +++|+.|++++|+++|.+|.
T Consensus 503 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (768)
T 3rgz_A 503 TGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDG 582 (768)
T ss_dssp CSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCS
T ss_pred CCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccc
Confidence 766664 666777777777777776666654 35666777777766666554
Q ss_pred --------------------------------------------hccCCccccEEeccCcccccCCchhhcCCCcccEEe
Q 006145 266 --------------------------------------------EVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLN 301 (659)
Q Consensus 266 --------------------------------------------~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 301 (659)
.++.+++|+.|||++|+++|.+|..++++++|+.|+
T Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 662 (768)
T 3rgz_A 583 MKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILN 662 (768)
T ss_dssp CCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEE
T ss_pred ccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEe
Confidence 344567899999999999999999999999999999
Q ss_pred ccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCccccCCCC
Q 006145 302 IADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAGNE 360 (659)
Q Consensus 302 l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~~~~~ 360 (659)
|++|+++|.+|..++.+++|+.|||++|+++|.+|..+..++.|+.+++++|+++|..|
T Consensus 663 Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP 721 (768)
T 3rgz_A 663 LGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721 (768)
T ss_dssp CCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECC
T ss_pred CcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCC
Confidence 99999999999999999999999999999999999999999999999999999998765
No 9
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.6e-38 Score=326.55 Aligned_cols=169 Identities=24% Similarity=0.336 Sum_probs=143.2
Q ss_pred CCCCceeccCcCceEEEEEec------CCcEEEEEEecccCC-CchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCC
Q 006145 479 FDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 479 ~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 551 (659)
+...+.||+|+||+||+|++. +++.||||+++.... ...++|.+|++++++++|||||+++|+|.+
T Consensus 28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~------- 100 (308)
T 4gt4_A 28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK------- 100 (308)
T ss_dssp EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-------
T ss_pred CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE-------
Confidence 445678999999999999963 478999999975543 234689999999999999999999999976
Q ss_pred CceeEEEEeccCCCChhhhhcCCCC-------------CCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCcee
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEGHA-------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIL 618 (659)
.+..+||||||++|||.++|+.... ...++|.++++|+.|||+||+|||+. +||||||||+|||
T Consensus 101 ~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NIL 177 (308)
T 4gt4_A 101 DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVL 177 (308)
T ss_dssp SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceE
Confidence 4568999999999999999974321 24699999999999999999999998 9999999999999
Q ss_pred ecCCcceEEccCcccccccccc---ccceecccccccCCCCC
Q 006145 619 LDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 619 ld~~~~~kl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~ 657 (659)
+|+++.+||+|||+|+...... ..+..+||+.|||||++
T Consensus 178 l~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l 219 (308)
T 4gt4_A 178 VYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAI 219 (308)
T ss_dssp ECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHH
T ss_pred ECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHH
Confidence 9999999999999998664322 23557899999999975
No 10
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=5.3e-38 Score=327.21 Aligned_cols=169 Identities=17% Similarity=0.346 Sum_probs=151.4
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCce
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 554 (659)
.+.|+..+.||+|+||+||+|+.. +|+.||||+++.......+.+.+|+++|++++|||||++++++.+ .+.
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-------~~~ 145 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-------GDE 145 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEE-------TTE
T ss_pred hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-------CCE
Confidence 356888899999999999999975 699999999987665666779999999999999999999999987 567
Q ss_pred eEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcccc
Q 006145 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (659)
Q Consensus 555 ~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~ 634 (659)
.|||||||++|+|.++++. ..+++.+...|+.||+.||+|||+. +||||||||+|||+++++.+||+|||+|+
T Consensus 146 ~~ivmEy~~gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~ 218 (346)
T 4fih_A 146 LWVVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCA 218 (346)
T ss_dssp EEEEECCCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEeCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCce
Confidence 9999999999999999975 3589999999999999999999998 99999999999999999999999999998
Q ss_pred ccccc-cccceecccccccCCCCCC
Q 006145 635 LAENA-EKVGHVIPYSGSIDPTNSA 658 (659)
Q Consensus 635 ~~~~~-~~~~~~~gt~~y~aPE~~~ 658 (659)
..... ......+||+.|||||++.
T Consensus 219 ~~~~~~~~~~~~~GTp~YmAPEvl~ 243 (346)
T 4fih_A 219 QVSKEVPRRKSLVGTPYWMAPELIS 243 (346)
T ss_dssp ECCSSSCCBCCCCSCGGGCCHHHHT
T ss_pred ecCCCCCcccccccCcCcCCHHHHC
Confidence 76443 3456789999999999763
No 11
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=7e-38 Score=326.79 Aligned_cols=172 Identities=12% Similarity=0.247 Sum_probs=144.4
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC--chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
.++|...+.||+|+||+||+|+.. +|+.||||++...... ..++|.+|+++|++++|||||++++++.+ .
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~-------~ 95 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEE-------N 95 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------T
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEE-------C
Confidence 367889999999999999999965 6999999999765432 23579999999999999999999999986 5
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
+..|||||||++|+|.+++... ....+++.+...|+.||+.||+|||+. +||||||||+|||+++++.+||+|||+
T Consensus 96 ~~~yiVmEy~~gg~L~~~i~~~-~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGl 171 (350)
T 4b9d_A 96 GSLYIVMDYCEGGDLFKRINAQ-KGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGI 171 (350)
T ss_dssp TEEEEEEECCTTCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTE
T ss_pred CEEEEEEeCCCCCcHHHHHHHc-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEccccc
Confidence 6799999999999999999753 234678999999999999999999998 999999999999999999999999999
Q ss_pred cccccccc-ccceecccccccCCCCCC
Q 006145 633 PLLAENAE-KVGHVIPYSGSIDPTNSA 658 (659)
Q Consensus 633 a~~~~~~~-~~~~~~gt~~y~aPE~~~ 658 (659)
|+...... .....+||+.|||||++.
T Consensus 172 a~~~~~~~~~~~~~~GT~~YmAPE~l~ 198 (350)
T 4b9d_A 172 ARVLNSTVELARACIGTPYYLSPEICE 198 (350)
T ss_dssp ESCCCHHHHHHHHHHSCCTTCCHHHHT
T ss_pred ceeecCCcccccccCCCccccCHHHHC
Confidence 98775433 335678999999999863
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.5e-37 Score=318.98 Aligned_cols=168 Identities=18% Similarity=0.297 Sum_probs=148.6
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccC---CCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
++|+..+.||+|+||+||+|+.. +|+.||||++.+.. ....+.+.+|+++|++++|||||++++++.+ .
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-------~ 104 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD-------D 104 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------S
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-------C
Confidence 46889999999999999999965 69999999997542 2345679999999999999999999999976 5
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
+..|+|||||++|+|.+++++. ..+++.+...|+.||+.||+|||++ +||||||||+|||+++++.+||+|||+
T Consensus 105 ~~~yivmEy~~gG~L~~~i~~~---~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGl 178 (311)
T 4aw0_A 105 EKLYFGLSYAKNGELLKYIRKI---GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGT 178 (311)
T ss_dssp SEEEEEECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCC
Confidence 6799999999999999999852 4699999999999999999999998 999999999999999999999999999
Q ss_pred ccccccc---cccceecccccccCCCCC
Q 006145 633 PLLAENA---EKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~---~~~~~~~gt~~y~aPE~~ 657 (659)
|+..... ......+||+.|||||++
T Consensus 179 a~~~~~~~~~~~~~~~~GTp~YmAPEvl 206 (311)
T 4aw0_A 179 AKVLSPESKQARANSFVGTAQYVSPELL 206 (311)
T ss_dssp CEECCTTTTCCCBCCCCSCGGGCCHHHH
T ss_pred ceecCCCCCcccccCcccCcccCCHHHH
Confidence 9876432 234567999999999975
No 13
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.2e-37 Score=320.08 Aligned_cols=169 Identities=21% Similarity=0.359 Sum_probs=138.1
Q ss_pred CCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHH--HHHHHHHhCCCCCCccceeeeeeeccccCCCCcee
Q 006145 478 NFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNF--MHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (659)
Q Consensus 478 ~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~--~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~ 555 (659)
+|...+.||+|+||+||+|++ +|+.||||+++... .+++ ++|+..+.+++|||||+++|+|.+... .....
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~---~~~~~ 76 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNG---TWTQL 76 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS---SSEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCC---CceEE
Confidence 456678999999999999998 58999999996543 2333 455666678899999999999986321 12468
Q ss_pred EEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCC-----CCCccccCCCCCceeecCCcceEEccC
Q 006145 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI-----VPGVFSNNLKITDILLDQNLVAKISSY 630 (659)
Q Consensus 556 ~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----~~~iiHrDlk~~NILld~~~~~kl~DF 630 (659)
|||||||++|+|.++++. ..++|..+.+++.|+|+||+|||+.+ .++||||||||+|||+|+++++||+||
T Consensus 77 ~lV~Ey~~~gsL~~~l~~----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DF 152 (303)
T 3hmm_A 77 WLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred EEEecCCCCCcHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeC
Confidence 999999999999999985 36999999999999999999999863 569999999999999999999999999
Q ss_pred ccccccccccc-----cceecccccccCCCCC
Q 006145 631 NLPLLAENAEK-----VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~~~~~-----~~~~~gt~~y~aPE~~ 657 (659)
|+|+....... ....+||+.|||||++
T Consensus 153 Gla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l 184 (303)
T 3hmm_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 184 (303)
T ss_dssp TTCEEEETTTTEESCC-----CCGGGCCHHHH
T ss_pred CCCccccCCCCceeeecccccccccccCHHHh
Confidence 99987654322 2346899999999975
No 14
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3.5e-37 Score=328.83 Aligned_cols=169 Identities=17% Similarity=0.346 Sum_probs=151.6
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCce
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 554 (659)
.+.|+..+.||+|+||+||+|+.. +|+.||||++........+.+.+|+++|++++|||||+++++|.+ .+.
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-------~~~ 222 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-------GDE 222 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEE-------TTE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEE-------CCE
Confidence 356888899999999999999965 599999999987665666779999999999999999999999987 567
Q ss_pred eEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcccc
Q 006145 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (659)
Q Consensus 555 ~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~ 634 (659)
.|||||||++|+|.++++. ..+++.+...|+.||+.||+|||+. +||||||||+||||+.++.+||+|||+|+
T Consensus 223 ~~iVmEy~~gG~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~ 295 (423)
T 4fie_A 223 LWVVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCA 295 (423)
T ss_dssp EEEEEECCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCE
T ss_pred EEEEEeCCCCCcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccce
Confidence 9999999999999999975 3589999999999999999999998 99999999999999999999999999998
Q ss_pred ccccc-cccceecccccccCCCCCC
Q 006145 635 LAENA-EKVGHVIPYSGSIDPTNSA 658 (659)
Q Consensus 635 ~~~~~-~~~~~~~gt~~y~aPE~~~ 658 (659)
..... ......+||+.|||||++.
T Consensus 296 ~~~~~~~~~~~~~GTp~YmAPEvl~ 320 (423)
T 4fie_A 296 QVSKEVPRRKSLVGTPYWMAPELIS 320 (423)
T ss_dssp ECCSSCCCBCCCEECTTTCCHHHHT
T ss_pred ECCCCCccccccccCcCcCCHHHHC
Confidence 76443 3456789999999999764
No 15
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=6.4e-37 Score=312.69 Aligned_cols=170 Identities=23% Similarity=0.282 Sum_probs=143.3
Q ss_pred CCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC--chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCceeE
Q 006145 480 DTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (659)
Q Consensus 480 ~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~~ 556 (659)
...+.||+|+||+||+|+.. ++..||||++...... ..++|.+|+++|++++|||||+++++|.+... .....|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~---~~~~~~ 105 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK---GKKCIV 105 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEET---TEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccC---CCcEEE
Confidence 34567999999999999965 5899999999755432 23579999999999999999999999865221 134589
Q ss_pred EEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeec-CCcceEEccCccccc
Q 006145 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD-QNLVAKISSYNLPLL 635 (659)
Q Consensus 557 lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld-~~~~~kl~DFGla~~ 635 (659)
||||||++|+|.+++++. ..+++..+..|+.||++||+|||++ .++||||||||+|||++ +++.+||+|||+|+.
T Consensus 106 lvmEy~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~ 181 (290)
T 3fpq_A 106 LVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEe
Confidence 999999999999999852 4699999999999999999999996 23499999999999998 479999999999986
Q ss_pred cccccccceecccccccCCCCC
Q 006145 636 AENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 636 ~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
... ......+||+.|||||++
T Consensus 182 ~~~-~~~~~~~GTp~YmAPE~~ 202 (290)
T 3fpq_A 182 KRA-SFAKAVIGTPEFMAPEMY 202 (290)
T ss_dssp CCT-TSBEESCSSCCCCCGGGG
T ss_pred CCC-CccCCcccCccccCHHHc
Confidence 543 345667999999999986
No 16
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=7.2e-37 Score=309.60 Aligned_cols=168 Identities=18% Similarity=0.303 Sum_probs=133.6
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCC---CchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
++|+..+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|+++|++++|||||++++++.+ .
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-------~ 85 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS-------K 85 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------S
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-------C
Confidence 57999999999999999999964 699999999975432 234579999999999999999999999976 5
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
+..|+||||+ +|+|.+++.+. ..+++.+...++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+
T Consensus 86 ~~~~ivmEy~-~g~L~~~l~~~---~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGl 158 (275)
T 3hyh_A 86 DEIIMVIEYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGL 158 (275)
T ss_dssp SEEEEEEECC-CEEHHHHHHHS---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSC
T ss_pred CEEEEEEeCC-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCC
Confidence 6799999999 68999999752 4699999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccceecccccccCCCCCC
Q 006145 633 PLLAENAEKVGHVIPYSGSIDPTNSA 658 (659)
Q Consensus 633 a~~~~~~~~~~~~~gt~~y~aPE~~~ 658 (659)
|+...+.......+||+.|||||++.
T Consensus 159 a~~~~~~~~~~~~~GT~~Y~APE~~~ 184 (275)
T 3hyh_A 159 SNIMTDGNFLKTSCGSPNYAAPEVIS 184 (275)
T ss_dssp C---------------CTTSCHHHHS
T ss_pred CeecCCCCccCCeeECcccCChhhhc
Confidence 98876666667789999999999863
No 17
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.1e-36 Score=313.40 Aligned_cols=179 Identities=16% Similarity=0.344 Sum_probs=138.5
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC-chHHHHHHHHHHhCCCCCCccceeeeeeeccccC-----
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDD----- 549 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~----- 549 (659)
++|+..+.||+|+||+||+|+.. +|+.||||+++....+ ..+++.+|+++|++++|||||++++++.+....+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 45888899999999999999965 6999999999765433 2357999999999999999999999987532110
Q ss_pred CCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEcc
Q 006145 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISS 629 (659)
Q Consensus 550 ~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~D 629 (659)
......|+|||||++|+|.++++........++.....|+.||++||+|||+. +||||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEcc
Confidence 11234799999999999999998643334567788899999999999999998 999999999999999999999999
Q ss_pred Cccccccccccc-------------cceecccccccCCCCCC
Q 006145 630 YNLPLLAENAEK-------------VGHVIPYSGSIDPTNSA 658 (659)
Q Consensus 630 FGla~~~~~~~~-------------~~~~~gt~~y~aPE~~~ 658 (659)
||+|+..+.... ....+||+.|||||++.
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~ 203 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIH 203 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHT
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHc
Confidence 999987643221 23468999999999753
No 18
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.2e-36 Score=315.92 Aligned_cols=164 Identities=16% Similarity=0.229 Sum_probs=140.3
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCcee
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~ 555 (659)
+.|...++||+|+||+||+|+.. +|+.||||+++.... +.+|+++|++++|||||++++++.+ .+..
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~-------~~~~ 125 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVRE-------GPWV 125 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEE-------TTEE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEE-------CCEE
Confidence 45667788999999999999965 599999999975432 2479999999999999999999986 5679
Q ss_pred EEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCc-ceEEccCcccc
Q 006145 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSYNLPL 634 (659)
Q Consensus 556 ~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~-~~kl~DFGla~ 634 (659)
|||||||++|+|.+++++. ..+++.+...|+.||+.||+|||+. +||||||||+|||++.++ .+||+|||+|+
T Consensus 126 ~ivmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~ 199 (336)
T 4g3f_A 126 NIFMELLEGGSLGQLIKQM---GCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHAL 199 (336)
T ss_dssp EEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCE
T ss_pred EEEEeccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCe
Confidence 9999999999999999852 4699999999999999999999998 999999999999999987 69999999998
Q ss_pred ccccccc------cceecccccccCCCCCC
Q 006145 635 LAENAEK------VGHVIPYSGSIDPTNSA 658 (659)
Q Consensus 635 ~~~~~~~------~~~~~gt~~y~aPE~~~ 658 (659)
....... ....+||+.|||||++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~ 229 (336)
T 4g3f_A 200 CLQPDGLGKSLLTGDYIPGTETHMAPEVVM 229 (336)
T ss_dssp EC------------CCCCCCGGGCCHHHHT
T ss_pred EccCCCcccceecCCccccCccccCHHHHC
Confidence 7643321 23468999999999863
No 19
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=5.8e-37 Score=314.56 Aligned_cols=168 Identities=18% Similarity=0.258 Sum_probs=140.0
Q ss_pred cCCCCCceeccCcCceEEEEEec----CCcEEEEEEecccCC--CchHHHHHHHHHHhCCCCCCccceeeeeeeccccCC
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~----~g~~vavK~l~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 550 (659)
++|+..+.||+|+||+||+|+.. +++.||||+++.... ....++.+|+++|++++|||||++++++.+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~------ 97 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT------ 97 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEE------
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE------
Confidence 46888999999999999999852 478999999975432 223468999999999999999999999986
Q ss_pred CCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccC
Q 006145 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (659)
Q Consensus 551 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 630 (659)
.+..|+|||||++|+|.+++++. ..+++.+...++.|++.||+|||+. +||||||||+|||+++++.+||+||
T Consensus 98 -~~~~~ivmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DF 170 (304)
T 3ubd_A 98 -EGKLYLILDFLRGGDLFTRLSKE---VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDF 170 (304)
T ss_dssp -TTEEEEEECCCTTCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESS
T ss_pred -CCEEEEEEEcCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEeccc
Confidence 56799999999999999999852 4699999999999999999999998 9999999999999999999999999
Q ss_pred cccccccc-ccccceecccccccCCCCC
Q 006145 631 NLPLLAEN-AEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~~-~~~~~~~~gt~~y~aPE~~ 657 (659)
|+|+.... .......+||+.|||||++
T Consensus 171 Gla~~~~~~~~~~~~~~GT~~YmAPE~~ 198 (304)
T 3ubd_A 171 GLSKESIDHEKKAYSFCGTVEYMAPEVV 198 (304)
T ss_dssp EEEEC-----CCCCSCCCCGGGCCHHHH
T ss_pred ccceeccCCCccccccccCcccCCHHHh
Confidence 99986533 3345668999999999975
No 20
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.7e-36 Score=318.46 Aligned_cols=182 Identities=22% Similarity=0.345 Sum_probs=152.8
Q ss_pred cCHHHHHHhhcCCCCCceeccCcCceEEEEEecC------CcEEEEEEecccCCC-chHHHHHHHHHHhCCCC-CCccce
Q 006145 467 FSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKN------GTFVAIRCLKMKKCH-STRNFMHHIELISKLRH-RHLVSA 538 (659)
Q Consensus 467 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~-~~~~~~~Ei~~l~~l~H-~niv~l 538 (659)
++.++++...++|...+.||+|+||+||+|++.. ++.||||+++..... ..++|.+|+++|++++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 3456677778899999999999999999998642 468999999765433 34679999999999975 899999
Q ss_pred eeeeeeccccCCCCceeEEEEeccCCCChhhhhcCCC-------------CCCCCCHHHHHHHHHHHHHHhhhhcCCCCC
Q 006145 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGH-------------AHQSLTWTQRISAAIGVAKGIQFLHTGIVP 605 (659)
Q Consensus 539 ~g~~~~~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~ 605 (659)
+|+|.+. .+..++|||||++|+|.++|+... ....++|.+++.|+.|||+||+|||+.
T Consensus 134 ~g~~~~~------~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~--- 204 (353)
T 4ase_A 134 LGACTKP------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--- 204 (353)
T ss_dssp EEEECCT------TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred EEEEEec------CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---
Confidence 9999751 345899999999999999997421 134589999999999999999999998
Q ss_pred CccccCCCCCceeecCCcceEEccCcccccccccc---ccceecccccccCCCCC
Q 006145 606 GVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 606 ~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~ 657 (659)
+||||||||+|||+++++.+||+|||+|+...... ..+..+||+.|||||++
T Consensus 205 ~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l 259 (353)
T 4ase_A 205 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 259 (353)
T ss_dssp TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHH
T ss_pred CeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHH
Confidence 99999999999999999999999999998764332 23457899999999975
No 21
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.9e-34 Score=315.92 Aligned_cols=291 Identities=22% Similarity=0.233 Sum_probs=223.2
Q ss_pred CCCcCCCCCCCceEeCC----------CCEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCC-Cc
Q 006145 57 EFCNTEPTSSLTVVCYE----------ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPL-SG 125 (659)
Q Consensus 57 ~~C~w~~~~~~gv~C~~----------~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~-p~ 125 (659)
..|.|.+ ..|.|.. .+++.|+|++|.+.+..|. .+.++++|++|+|++|.+.+.+ +.
T Consensus 6 ~~c~~~~---~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~---------~~~~l~~L~~L~L~~n~~~~~i~~~ 73 (455)
T 3v47_A 6 SECSVIG---YNAICINRGLHQVPELPAHVNYVDLSLNSIAELNET---------SFSRLQDLQFLKVEQQTPGLVIRNN 73 (455)
T ss_dssp -CCEEET---TEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTT---------TTSSCTTCCEEECCCCSTTCEECTT
T ss_pred ceeEEEc---cccCcCCCCcccCCCCCCccCEEEecCCccCcCChh---------HhccCccccEEECcCCcccceECcc
Confidence 3466542 3477753 3589999999988755443 4567778888888888776554 55
Q ss_pred ccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccc--cCCCCCCCEEEccCCcCCccCCcc-cCCC
Q 006145 126 KISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDW--LGSLPILAVLSLRNNMFNGTLPDS-FSYL 202 (659)
Q Consensus 126 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--l~~l~~L~~L~L~~N~l~~~~p~~-~~~l 202 (659)
.|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++.+|.. +..+++|++|+|++|.+++..|.. |.++
T Consensus 74 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l 153 (455)
T 3v47_A 74 TFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNM 153 (455)
T ss_dssp TTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGC
T ss_pred cccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCC
Confidence 6778888888888888887777777888888888888888887655544 777888888888888887776765 6778
Q ss_pred CCCcEEeccccccccCCCC-CC----------------------------------CCCcCCEEEcccCCCCCCCCCC--
Q 006145 203 ENLRVLALSNNHFYGEVPD-FS----------------------------------GLTYLQVLDLENNALGPQFPKV-- 245 (659)
Q Consensus 203 ~~L~~L~Ls~N~l~~~~p~-~~----------------------------------~l~~L~~L~L~~N~l~~~~~~~-- 245 (659)
++|++|++++|++++..+. +. .+++|++|++++|.+++..|..
T Consensus 154 ~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~ 233 (455)
T 3v47_A 154 RRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFF 233 (455)
T ss_dssp TTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHH
T ss_pred CcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhh
Confidence 8888888888887776553 32 3367888888888765422210
Q ss_pred ----------------------------------------CcccceEecCCCcCCccCchhccCCccccEEeccCccccc
Q 006145 246 ----------------------------------------GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVG 285 (659)
Q Consensus 246 ----------------------------------------~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 285 (659)
..+|+.|++++|++++.+|..+..+++|+.|+|++|++++
T Consensus 234 ~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 313 (455)
T 3v47_A 234 DAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINK 313 (455)
T ss_dssp HHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCE
T ss_pred ccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccc
Confidence 1468888888888888888888888899999999999888
Q ss_pred CCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCccccCCC
Q 006145 286 PFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAGN 359 (659)
Q Consensus 286 ~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~~~~ 359 (659)
..|..|..+++|+.|+|++|++++..|..+..+++|+.|++++|++++..|..+..+++|+.+++++|.+++..
T Consensus 314 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 387 (455)
T 3v47_A 314 IDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVP 387 (455)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred cChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCC
Confidence 88888888899999999999988888888888888999999999998888888888888999999988887543
No 22
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=2e-35 Score=309.48 Aligned_cols=273 Identities=18% Similarity=0.214 Sum_probs=143.8
Q ss_pred CCHHHHHHHHHHHhcC-CCC-CCCCCC----CCCCCCCcCCCCCCCceEeCC----------CCEeEEEeCCCCCCCCCC
Q 006145 28 LQSSQAQTLLRIQGLL-NNP-AVLSSW----NITTEFCNTEPTSSLTVVCYE----------ESITQLHIVGNKRAPMLP 91 (659)
Q Consensus 28 ~~~~~~~aLl~~k~~l-~~~-~~l~~W----~~~~~~C~w~~~~~~gv~C~~----------~~v~~L~l~~~~~~~~l~ 91 (659)
+..+|++||++||..+ .++ ..+.+| ....++|.|. |+.|.. .+|+.|+|+++.+. .
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~-----g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~-- 95 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRT-----GRALKATADLLEDATQPGRVALELRSVPLP-Q-- 95 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSH-----HHHHHHHHHHHHHHTSTTCCEEEEESSCCS-S--
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccC-----CcchhhhHHHHhcccccceeEEEccCCCch-h--
Confidence 5578999999999987 344 356778 4457889996 688841 45556665555543 1
Q ss_pred CCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCC
Q 006145 92 LSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRV 171 (659)
Q Consensus 92 ~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 171 (659)
+|..+.++++|++|+|++|.++ .+|..|+++++|++|+|++|.++ .+|..+.++++|++|+|++|++.+.+
T Consensus 96 -------lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~ 166 (328)
T 4fcg_A 96 -------FPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTEL 166 (328)
T ss_dssp -------CCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCC
T ss_pred -------cChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCcccc
Confidence 2223444555555555555555 45555555555555555555555 44555555555555555555555555
Q ss_pred ccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEeccccccccCCCCCCCCCcCCEEEcccCCCCCCCCCCCcccce
Q 006145 172 PDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVT 251 (659)
Q Consensus 172 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~ 251 (659)
|..++.. .++..|.++++|++|+|++|+++..+..+..+++|++|+|++|.+++
T Consensus 167 p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~----------- 220 (328)
T 4fcg_A 167 PEPLAST---------------DASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSA----------- 220 (328)
T ss_dssp CSCSEEE---------------C-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCC-----------
T ss_pred ChhHhhc---------------cchhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCCc-----------
Confidence 5444320 00001122555555555555555322235555555555555554432
Q ss_pred EecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCC
Q 006145 252 MILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLL 331 (659)
Q Consensus 252 L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l 331 (659)
+|..++.+++|+.|+|++|++.+.+|..+..+++|+.|+|++|++.+.+|..+..+++|+.|+|++|++
T Consensus 221 -----------l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~ 289 (328)
T 4fcg_A 221 -----------LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVN 289 (328)
T ss_dssp -----------CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTT
T ss_pred -----------CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCc
Confidence 223344444444444444444444444444444444444444444444444444444455555555555
Q ss_pred cccCChhhhCCCCCCEEEcCCcc
Q 006145 332 TGQLPNCLLAGSKNRVVLYARNC 354 (659)
Q Consensus 332 ~g~ip~~~~~~~~l~~l~~~~N~ 354 (659)
.|.+|..+..+++++.+.+..|.
T Consensus 290 ~~~iP~~l~~L~~L~~l~l~~~~ 312 (328)
T 4fcg_A 290 LSRLPSLIAQLPANCIILVPPHL 312 (328)
T ss_dssp CCCCCGGGGGSCTTCEEECCGGG
T ss_pred hhhccHHHhhccCceEEeCCHHH
Confidence 45555555555555554444443
No 23
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.6e-35 Score=306.63 Aligned_cols=232 Identities=26% Similarity=0.384 Sum_probs=204.7
Q ss_pred CCCCEEEecCCCCcC--CCCcccCCCCCCcEEEccc-CcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCE
Q 006145 107 PDLKVLRLVSLGLWG--PLSGKISRLSSLEILNMSS-NFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAV 183 (659)
Q Consensus 107 ~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 183 (659)
.+++.|+|++|.+++ .+|..|.++++|++|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|..+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 468889999999988 8888999999999999994 8898889988999999999999999998888988999999999
Q ss_pred EEccCCcCCccCCcccCCCCCCcEEeccccccccCCCC-CCCCC-cCCEEEcccCCCCCCCCCCCcccceEecCCCcCCc
Q 006145 184 LSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLT-YLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRS 261 (659)
Q Consensus 184 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~-~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~ 261 (659)
|+|++|.+++.+|..|..+++|++|+|++|++++.+|. +..++ +|++|+|++ |++++
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~---------------------N~l~~ 188 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISR---------------------NRLTG 188 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCS---------------------SEEEE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcC---------------------Ceeec
Confidence 99999999888888888899999999999988877664 66665 666665554 55567
Q ss_pred cCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhC
Q 006145 262 AIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLA 341 (659)
Q Consensus 262 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~ 341 (659)
.+|..+..++ |+.|+|++|.+++.+|..+..+++|+.|++++|++++.+|. +..+++|+.|++++|+++|.+|..+..
T Consensus 189 ~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 266 (313)
T 1ogq_A 189 KIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQ 266 (313)
T ss_dssp ECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGG
T ss_pred cCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhc
Confidence 7888888887 99999999999999999999999999999999999988776 788999999999999999999999999
Q ss_pred CCCCCEEEcCCccccCCCCC
Q 006145 342 GSKNRVVLYARNCLAAGNEN 361 (659)
Q Consensus 342 ~~~l~~l~~~~N~l~~~~~~ 361 (659)
+++++.+++++|.+++..|.
T Consensus 267 l~~L~~L~Ls~N~l~~~ip~ 286 (313)
T 1ogq_A 267 LKFLHSLNVSFNNLCGEIPQ 286 (313)
T ss_dssp CTTCCEEECCSSEEEEECCC
T ss_pred CcCCCEEECcCCcccccCCC
Confidence 99999999999999976543
No 24
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-32 Score=302.32 Aligned_cols=274 Identities=19% Similarity=0.119 Sum_probs=216.4
Q ss_pred CEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCC
Q 006145 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSIL 154 (659)
Q Consensus 75 ~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 154 (659)
.++.|+|++|.+.+..+. .+.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++
T Consensus 33 ~l~~L~L~~n~l~~~~~~---------~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 103 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQD---------EFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGL 103 (477)
T ss_dssp TCSEEECCSSCCCEECTT---------TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTC
T ss_pred CCcEEECCCCccceECHh---------HccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCC
Confidence 577888888887654333 56678888888888888888888888888888888888888886666667888
Q ss_pred CCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEeccccccccCCCC-CCCCCcCCEEEc
Q 006145 155 TSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDL 233 (659)
Q Consensus 155 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L 233 (659)
++|++|+|++|.+.+..|..|..+++|+.|+|++|.+++..|..|.++++|+.|+|++|++++.++. |..+++|+.|+|
T Consensus 104 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l 183 (477)
T 2id5_A 104 SNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRL 183 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEE
T ss_pred CCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeC
Confidence 8888888888888888888888888888888888888888888888888888888888888876654 778888888888
Q ss_pred ccCCCCCCCCCC---CcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCc
Q 006145 234 ENNALGPQFPKV---GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGK 310 (659)
Q Consensus 234 ~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~ 310 (659)
++|.+.+..+.. +++|+.|++++|.+.+.+|.......+|+.|+|++|++++..+..+..+++|+.|+|++|++++.
T Consensus 184 ~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 263 (477)
T 2id5_A 184 RHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTI 263 (477)
T ss_dssp ESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEE
T ss_pred CCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCcc
Confidence 888887665543 46777888888777777776666666788888888877755556777778888888888887777
Q ss_pred CCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCccccC
Q 006145 311 LFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (659)
Q Consensus 311 ~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~~ 357 (659)
.+..+..+++|+.|+|++|++++..|..+..+++|+.+++++|.+++
T Consensus 264 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 310 (477)
T 2id5_A 264 EGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTT 310 (477)
T ss_dssp CTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSC
T ss_pred ChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCce
Confidence 77777777788888888888877777777777778888888877764
No 25
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.9e-32 Score=298.52 Aligned_cols=253 Identities=21% Similarity=0.206 Sum_probs=229.9
Q ss_pred CCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccC-ChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEE
Q 006145 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAI-PQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLS 185 (659)
Q Consensus 107 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 185 (659)
++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 68999999999999999999999999999999999998666 56799999999999999999999999999999999999
Q ss_pred ccCCcCCccCCcc--cCCCCCCcEEeccccccccCCCC--CCCCCcCCEEEcccCCCCCCCCCCC---------------
Q 006145 186 LRNNMFNGTLPDS--FSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALGPQFPKVG--------------- 246 (659)
Q Consensus 186 L~~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p~--~~~l~~L~~L~L~~N~l~~~~~~~~--------------- 246 (659)
|++|.+++.+|.. |.++++|++|+|++|++++..|. +.++++|++|++++|.+++..+...
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9999999866665 99999999999999999998776 8899999999999999988766532
Q ss_pred ----------------------cccceEecCCCcCCccCchhccC-----------------------------------
Q 006145 247 ----------------------KKLVTMILSKNKFRSAIPAEVSS----------------------------------- 269 (659)
Q Consensus 247 ----------------------~~L~~L~l~~N~l~~~~p~~~~~----------------------------------- 269 (659)
++|+.|++++|++++.+|..+..
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~ 269 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTF 269 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTT
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCccccc
Confidence 46888999999888766655432
Q ss_pred ----CccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCC
Q 006145 270 ----YYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKN 345 (659)
Q Consensus 270 ----l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l 345 (659)
.++|+.|++++|.+++.+|..+..+++|+.|++++|++++..|..+..+++|+.|++++|.+++..|..+..+++|
T Consensus 270 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 349 (455)
T 3v47_A 270 KGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKL 349 (455)
T ss_dssp GGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTC
T ss_pred ccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccC
Confidence 2589999999999999999999999999999999999999999999999999999999999998889999999999
Q ss_pred CEEEcCCccccCCC
Q 006145 346 RVVLYARNCLAAGN 359 (659)
Q Consensus 346 ~~l~~~~N~l~~~~ 359 (659)
+.+++++|.+++..
T Consensus 350 ~~L~Ls~N~l~~~~ 363 (455)
T 3v47_A 350 EVLDLSYNHIRALG 363 (455)
T ss_dssp CEEECCSSCCCEEC
T ss_pred CEEECCCCcccccC
Confidence 99999999998654
No 26
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-33 Score=301.00 Aligned_cols=173 Identities=14% Similarity=0.255 Sum_probs=145.5
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC--chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCc
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
++|...+.||+|+||+||+|+.. +|+.||||+++..... ..+.+.+|+++|++++|||||++++++..... ....+
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~-~~~~~ 132 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVP-YGEFK 132 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSC-TTTCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccc-cccCC
Confidence 56888999999999999999965 6999999999754332 23568999999999999999999998864211 11245
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCccc
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla 633 (659)
..|||||||+ |+|.+++.. ...+++.....|+.||+.||+|||+. +||||||||+|||++.++.+||+|||+|
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~---~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla 205 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHS---SQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTS---SSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEeCCC-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeeccee
Confidence 7899999996 689999976 35799999999999999999999998 9999999999999999999999999999
Q ss_pred ccccc-----ccccceecccccccCCCCC
Q 006145 634 LLAEN-----AEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 634 ~~~~~-----~~~~~~~~gt~~y~aPE~~ 657 (659)
+.... .......+||+.|||||++
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~ 234 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATRWYRAPELM 234 (398)
T ss_dssp BCC-------CCCCCSSCCCCTTCCHHHH
T ss_pred eecccCccccccccccceeChHhcCHHHh
Confidence 86532 2233567999999999974
No 27
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.7e-32 Score=308.03 Aligned_cols=251 Identities=22% Similarity=0.213 Sum_probs=214.7
Q ss_pred cccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCC
Q 006145 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPIL 181 (659)
Q Consensus 102 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 181 (659)
.+.++++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|
T Consensus 70 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L 149 (597)
T 3oja_B 70 LLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKL 149 (597)
T ss_dssp HHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred HHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCC
Confidence 35678999999999999999888899999999999999999998888889999999999999999996666667999999
Q ss_pred CEEEccCCcCCccCCcccCCCCCCcEEeccccccccCCCCCCCCC-------------------cCCEEEcccCCCCCCC
Q 006145 182 AVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLT-------------------YLQVLDLENNALGPQF 242 (659)
Q Consensus 182 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~-------------------~L~~L~L~~N~l~~~~ 242 (659)
++|+|++|.+++..|..|+++++|+.|+|++|.+++.. +..++ +|+.|++++|.++...
T Consensus 150 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~ 227 (597)
T 3oja_B 150 TTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVR 227 (597)
T ss_dssp CEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC--GGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEE
T ss_pred CEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC--hhhhhhhhhhhcccCccccccCCchhheeeccCCcccccc
Confidence 99999999999988889999999999999999998753 23333 4555555555555444
Q ss_pred CCCCcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCC
Q 006145 243 PKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELG 322 (659)
Q Consensus 243 ~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~ 322 (659)
+....+|+.|+|++|.+++ +..+..+++|+.|+|++|.+++.+|..|..+++|+.|+|++|++++ +|..+..+++|+
T Consensus 228 ~~~~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~ 304 (597)
T 3oja_B 228 GPVNVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLK 304 (597)
T ss_dssp CSCCSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCC
T ss_pred cccCCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCc
Confidence 4445689999999999987 4678899999999999999999999999999999999999999987 466777889999
Q ss_pred EEECcCCCCcccCChhhhCCCCCCEEEcCCccccCC
Q 006145 323 FVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAG 358 (659)
Q Consensus 323 ~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~~~ 358 (659)
.|+|++|.++ .+|..+..+++|+.+++++|.+++.
T Consensus 305 ~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~ 339 (597)
T 3oja_B 305 VLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL 339 (597)
T ss_dssp EEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC
T ss_pred EEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc
Confidence 9999999998 6888888889999999999988754
No 28
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3e-32 Score=300.41 Aligned_cols=275 Identities=20% Similarity=0.149 Sum_probs=252.2
Q ss_pred CCEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccC
Q 006145 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (659)
Q Consensus 74 ~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (659)
.+++.|+|++|.+.+..|. .+.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.+
T Consensus 56 ~~L~~L~L~~n~i~~~~~~---------~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~ 126 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPG---------AFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQD 126 (477)
T ss_dssp TTCCEEECTTSCCCEECTT---------TTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTT
T ss_pred CCCCEEECCCCccCEeChh---------hhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccc
Confidence 4789999999987755443 5778999999999999999888888999999999999999999999999999
Q ss_pred CCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEeccccccccCCCC-CCCCCcCCEEE
Q 006145 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLD 232 (659)
Q Consensus 154 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ 232 (659)
+++|++|+|++|.+.+..|..|.++++|+.|+|++|.+++..+..|.++++|+.|+|++|.+.+..+. |..+++|+.|+
T Consensus 127 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 206 (477)
T 2id5_A 127 LYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLE 206 (477)
T ss_dssp CTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEE
T ss_pred cccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceee
Confidence 99999999999999999999999999999999999999987777899999999999999999987774 99999999999
Q ss_pred cccCCCCCCCCCC---CcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCC
Q 006145 233 LENNALGPQFPKV---GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG 309 (659)
Q Consensus 233 L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 309 (659)
+++|.+.+.+|.. ..+|+.|++++|++++..+..+..+++|+.|+|++|.+++..+..|..+++|+.|+|++|++++
T Consensus 207 l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 286 (477)
T 2id5_A 207 ISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAV 286 (477)
T ss_dssp EECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSE
T ss_pred CCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccce
Confidence 9999887766653 3589999999999997666789999999999999999998888899999999999999999999
Q ss_pred cCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCccccC
Q 006145 310 KLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (659)
Q Consensus 310 ~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~~ 357 (659)
..|..+..+++|+.|++++|++++..+..+..+++|+.+++++|.+.+
T Consensus 287 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 287 VEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp ECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEEC
T ss_pred ECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccC
Confidence 999999999999999999999998777778888999999999999875
No 29
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.8e-33 Score=295.89 Aligned_cols=167 Identities=12% Similarity=0.212 Sum_probs=142.0
Q ss_pred HhhcCCCCCceeccCcCceEEEEEec----CCcEEEEEEecccCCCchHHHHHHHHHHhCC-CCCCccceeeeeeecccc
Q 006145 474 EATNNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFD 548 (659)
Q Consensus 474 ~~~~~~~~~~~ig~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~ 548 (659)
...+.|...+.||+|+||+||+|+.+ +++.||||++.... ...++.+|+++|+.+ +|||||++++++.+
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~---- 91 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRK---- 91 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE----
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEE----
Confidence 34678999999999999999999853 47899999986543 356789999999998 69999999999876
Q ss_pred CCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCC-cceEE
Q 006145 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN-LVAKI 627 (659)
Q Consensus 549 ~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~-~~~kl 627 (659)
.+..|+|||||++|+|.++++ .+++.+...++.|++.||+|||+. +||||||||+|||++.+ +.+||
T Consensus 92 ---~~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl 159 (361)
T 4f9c_A 92 ---NDHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYAL 159 (361)
T ss_dssp ---TTEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEE
T ss_pred ---CCEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEE
Confidence 567999999999999999985 388999999999999999999998 99999999999999977 89999
Q ss_pred ccCcccccccccc-----------------------------ccceecccccccCCCCCC
Q 006145 628 SSYNLPLLAENAE-----------------------------KVGHVIPYSGSIDPTNSA 658 (659)
Q Consensus 628 ~DFGla~~~~~~~-----------------------------~~~~~~gt~~y~aPE~~~ 658 (659)
+|||+|+...+.. .....+||+.|||||++.
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 219 (361)
T 4f9c_A 160 VDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLT 219 (361)
T ss_dssp CCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHT
T ss_pred CcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHc
Confidence 9999997543221 123468999999999753
No 30
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.98 E-value=1.3e-31 Score=287.42 Aligned_cols=268 Identities=20% Similarity=0.198 Sum_probs=220.2
Q ss_pred CEeEEEeCCCCCCCCCCCCCcCCcccc-cccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccC
Q 006145 75 SITQLHIVGNKRAPMLPLSFSMDSFVT-TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (659)
Q Consensus 75 ~v~~L~l~~~~~~~~l~~~~~~~~~~~-~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (659)
.++.|++.++.+. .+|. .+.++++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.+
T Consensus 46 ~l~~l~l~~~~l~----------~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 115 (390)
T 3o6n_A 46 NQKIVTFKNSTMR----------KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQN 115 (390)
T ss_dssp CCSEEEEESCEES----------EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred CceEEEecCCchh----------hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcC
Confidence 3555666665433 2333 3577899999999999998888889999999999999999999888888999
Q ss_pred CCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEeccccccccCCCCCCCCC-------
Q 006145 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLT------- 226 (659)
Q Consensus 154 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~------- 226 (659)
+++|++|+|++|.++...+..|..+++|++|++++|.+++..|..|.++++|+.|++++|++++.. +..++
T Consensus 116 l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~l~~L~~L~l 193 (390)
T 3o6n_A 116 VPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANV 193 (390)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC--GGGCTTCSEEEC
T ss_pred CCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc--cccccccceeec
Confidence 999999999999998554455789999999999999999888888999999999999999988653 23333
Q ss_pred ------------cCCEEEcccCCCCCCCCCCCcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCC
Q 006145 227 ------------YLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSL 294 (659)
Q Consensus 227 ------------~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 294 (659)
+|++|++++|.++........+|+.|++++|.+++. ..+..+++|+.|+|++|.+++..|..+..+
T Consensus 194 ~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l 271 (390)
T 3o6n_A 194 SYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKM 271 (390)
T ss_dssp CSSCCSEEECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTC
T ss_pred ccccccccCCCCcceEEECCCCeeeeccccccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHcccc
Confidence 455556666655544444456899999999999874 578899999999999999999889999999
Q ss_pred CcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCccccCC
Q 006145 295 PSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAG 358 (659)
Q Consensus 295 ~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~~~ 358 (659)
++|+.|++++|++++ +|..+..+++|+.|++++|+++ .+|..+..+++++.+++++|.++..
T Consensus 272 ~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~ 333 (390)
T 3o6n_A 272 QRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL 333 (390)
T ss_dssp SSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC
T ss_pred ccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee
Confidence 999999999999986 4666778899999999999998 6788888889999999999998743
No 31
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.98 E-value=5.3e-33 Score=309.72 Aligned_cols=169 Identities=21% Similarity=0.290 Sum_probs=144.8
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccC---CCchHHHH---HHHHHHhCCCCCCccceeeeeeecccc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFM---HHIELISKLRHRHLVSALGHCFECYFD 548 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~---~Ei~~l~~l~H~niv~l~g~~~~~~~~ 548 (659)
.++|...+.||+|+||+||+|+.. +|+.||||++++.. ......+. +++++++.++|||||++++++.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~---- 263 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT---- 263 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC----
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEE----
Confidence 367889999999999999999965 59999999996532 12223333 44677888999999999999986
Q ss_pred CCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEc
Q 006145 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (659)
Q Consensus 549 ~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~ 628 (659)
.+..|||||||+||+|.++|.+. ..+++.....|+.||+.||+|||+. +||||||||+|||||++|.+||+
T Consensus 264 ---~~~lylVmEy~~GGdL~~~l~~~---~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~ 334 (689)
T 3v5w_A 264 ---PDKLSFILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRIS 334 (689)
T ss_dssp ---SSEEEEEECCCCSCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred ---CCEEEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEec
Confidence 56799999999999999999852 4699999999999999999999998 99999999999999999999999
Q ss_pred cCccccccccccccceecccccccCCCCCC
Q 006145 629 SYNLPLLAENAEKVGHVIPYSGSIDPTNSA 658 (659)
Q Consensus 629 DFGla~~~~~~~~~~~~~gt~~y~aPE~~~ 658 (659)
|||+|+..... .....+||+.|||||++.
T Consensus 335 DFGlA~~~~~~-~~~t~~GTp~YmAPEvl~ 363 (689)
T 3v5w_A 335 DLGLACDFSKK-KPHASVGTHGYMAPEVLQ 363 (689)
T ss_dssp CCTTCEECSSC-CCCSCCSCGGGCCHHHHS
T ss_pred ccceeeecCCC-CCCCccCCcCccCHHHHh
Confidence 99999876543 345679999999999863
No 32
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.98 E-value=5e-32 Score=308.95 Aligned_cols=279 Identities=19% Similarity=0.212 Sum_probs=242.3
Q ss_pred CCEeEEEeCCCCCCCC-CCCCCcC-------Cccccccc--CCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCc-
Q 006145 74 ESITQLHIVGNKRAPM-LPLSFSM-------DSFVTTLV--KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNF- 142 (659)
Q Consensus 74 ~~v~~L~l~~~~~~~~-l~~~~~~-------~~~~~~l~--~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~- 142 (659)
.+++.|+|++|.+.+. ++..... +.+|..+. ++++|++|+|++|.+.+.+|..|+++++|++|+|++|+
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~ 285 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRG 285 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCC
Confidence 5799999999998873 1111111 11566788 99999999999999999999999999999999999998
Q ss_pred Ccc-cCChhccCC------CCCcEEEeecCCCCCCCcc--ccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEecccc
Q 006145 143 LNG-AIPQELSIL------TSLQTLILDENMLAGRVPD--WLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNN 213 (659)
Q Consensus 143 l~~-~~p~~~~~l------~~L~~L~Ls~N~l~~~~p~--~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 213 (659)
++| .+|..++++ ++|++|+|++|+++ .+|. .++.+++|++|++++|+++|.+| .|+++++|+.|+|++|
T Consensus 286 l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N 363 (636)
T 4eco_A 286 ISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYN 363 (636)
T ss_dssp SCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSS
T ss_pred CccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCC
Confidence 999 899999887 99999999999999 8998 99999999999999999999999 9999999999999999
Q ss_pred ccccCCCCCCCCCc-CCEEEcccCCCCCCCCCC-----CcccceEecCCCcCCccCchhcc-------CCccccEEeccC
Q 006145 214 HFYGEVPDFSGLTY-LQVLDLENNALGPQFPKV-----GKKLVTMILSKNKFRSAIPAEVS-------SYYQLQRLDLSS 280 (659)
Q Consensus 214 ~l~~~~p~~~~l~~-L~~L~L~~N~l~~~~~~~-----~~~L~~L~l~~N~l~~~~p~~~~-------~l~~L~~L~Ls~ 280 (659)
+++..+..+..+++ |++|++++|.++ .+|.. ..+|+.|++++|.+++.+|..+. .+++|+.|+|++
T Consensus 364 ~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~ 442 (636)
T 4eco_A 364 QITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSN 442 (636)
T ss_dssp EEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCS
T ss_pred ccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcC
Confidence 99955556999999 999999999999 55554 23799999999999999999888 888999999999
Q ss_pred cccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCC-C-------CCCCEEECcCCCCcccCChhhh--CCCCCCEEEc
Q 006145 281 NRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSC-N-------PELGFVDLSSNLLTGQLPNCLL--AGSKNRVVLY 350 (659)
Q Consensus 281 N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~-~-------~~L~~L~ls~N~l~g~ip~~~~--~~~~l~~l~~ 350 (659)
|+++...+..+..+++|+.|+|++|+++ .+|..... . ++|+.|++++|+++ .+|..+. .+++++.+++
T Consensus 443 N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~L 520 (636)
T 4eco_A 443 NQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDL 520 (636)
T ss_dssp SCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEEC
T ss_pred CccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEEC
Confidence 9999544455667999999999999999 55654332 2 28999999999999 7998887 8899999999
Q ss_pred CCccccC
Q 006145 351 ARNCLAA 357 (659)
Q Consensus 351 ~~N~l~~ 357 (659)
++|.+++
T Consensus 521 s~N~l~~ 527 (636)
T 4eco_A 521 SYNSFSK 527 (636)
T ss_dssp CSSCCSS
T ss_pred CCCCCCC
Confidence 9999985
No 33
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.98 E-value=3e-31 Score=301.28 Aligned_cols=300 Identities=21% Similarity=0.231 Sum_probs=191.5
Q ss_pred CCCcCCCCCCCceEeCC-----------CCEeEEEeCCCCCCCCCCCCCc-----------C---Ccc-cccccCCCCCC
Q 006145 57 EFCNTEPTSSLTVVCYE-----------ESITQLHIVGNKRAPMLPLSFS-----------M---DSF-VTTLVKLPDLK 110 (659)
Q Consensus 57 ~~C~w~~~~~~gv~C~~-----------~~v~~L~l~~~~~~~~l~~~~~-----------~---~~~-~~~l~~l~~L~ 110 (659)
++|.|. .....|.|.+ .+++.|+|++|.+.+..+..|. . ..+ +..+.++++|+
T Consensus 5 ~~c~~~-~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~ 83 (606)
T 3vq2_A 5 NPCIEV-VPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLS 83 (606)
T ss_dssp -CCEEE-ETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCC
T ss_pred CCceec-CCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcC
Confidence 456652 1223577743 3689999999988765543221 1 112 34566777777
Q ss_pred EEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCC-CCccccCCCCCCCEEEccCC
Q 006145 111 VLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAG-RVPDWLGSLPILAVLSLRNN 189 (659)
Q Consensus 111 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~L~~N 189 (659)
+|+|++|.+++..|..|+++++|++|+|++|.+++..|..++++++|++|+|++|.+.+ .+|..|+++++|++|++++|
T Consensus 84 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n 163 (606)
T 3vq2_A 84 NLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYN 163 (606)
T ss_dssp EEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSS
T ss_pred EeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCC
Confidence 77777777777777777777777777777777776666667777777777777777765 56777777777777777777
Q ss_pred cCCccCCcccCCCC------------------------------------------------------------------
Q 006145 190 MFNGTLPDSFSYLE------------------------------------------------------------------ 203 (659)
Q Consensus 190 ~l~~~~p~~~~~l~------------------------------------------------------------------ 203 (659)
++++..|..|+.++
T Consensus 164 ~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~ 243 (606)
T 3vq2_A 164 YIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKD 243 (606)
T ss_dssp CCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTT
T ss_pred cceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhcccccccccccccccccc
Confidence 77655443322111
Q ss_pred ----------------------------------------------------------------CCcEEeccccccccCC
Q 006145 204 ----------------------------------------------------------------NLRVLALSNNHFYGEV 219 (659)
Q Consensus 204 ----------------------------------------------------------------~L~~L~Ls~N~l~~~~ 219 (659)
+|+.|++++|.+ +.+
T Consensus 244 ~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l-~~l 322 (606)
T 3vq2_A 244 ERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQF 322 (606)
T ss_dssp SCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCC-SSC
T ss_pred CCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccC-ccc
Confidence 111222222221 111
Q ss_pred CC---------------------CCCCCcCCEEEcccCCCCCC--------------------------CCC--CCcccc
Q 006145 220 PD---------------------FSGLTYLQVLDLENNALGPQ--------------------------FPK--VGKKLV 250 (659)
Q Consensus 220 p~---------------------~~~l~~L~~L~L~~N~l~~~--------------------------~~~--~~~~L~ 250 (659)
|. +..+++|++|++++|.+++. ... .+++|+
T Consensus 323 p~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~ 402 (606)
T 3vq2_A 323 PTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQ 402 (606)
T ss_dssp CCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEECCCCTTCTTCC
T ss_pred ccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccchhhccCCCCCC
Confidence 11 11223333444444433221 100 124567
Q ss_pred eEecCCCcCCccCc-hhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCC-cCCcCCCCCCCCCEEECcC
Q 006145 251 TMILSKNKFRSAIP-AEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG-KLFDDLSCNPELGFVDLSS 328 (659)
Q Consensus 251 ~L~l~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~-~~p~~~~~~~~L~~L~ls~ 328 (659)
.|++++|++.+..| ..+..+++|+.|++++|.+++..|..+..+++|+.|++++|++++ .+|..+..+++|+.|++++
T Consensus 403 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~ 482 (606)
T 3vq2_A 403 HLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSK 482 (606)
T ss_dssp EEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred eeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCC
Confidence 77777777777666 567778888888888888877777777788888888888888777 3677777778888888888
Q ss_pred CCCcccCChhhhCCCCCCEEEcCCccccCC
Q 006145 329 NLLTGQLPNCLLAGSKNRVVLYARNCLAAG 358 (659)
Q Consensus 329 N~l~g~ip~~~~~~~~l~~l~~~~N~l~~~ 358 (659)
|++++..|..+..+++|+.+++++|.+++.
T Consensus 483 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 512 (606)
T 3vq2_A 483 CQLEQISWGVFDTLHRLQLLNMSHNNLLFL 512 (606)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCSCE
T ss_pred CcCCccChhhhcccccCCEEECCCCcCCCc
Confidence 888777777777777788888888777653
No 34
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.97 E-value=7.9e-31 Score=297.85 Aligned_cols=273 Identities=21% Similarity=0.156 Sum_probs=232.8
Q ss_pred CEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCC
Q 006145 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSIL 154 (659)
Q Consensus 75 ~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 154 (659)
+++.|++++|.+.+..+. .+.++++|++|+|++|.++ .+|..+.++++|++|++++|.+++..|..+.++
T Consensus 255 ~L~~L~l~~n~l~~~~~~---------~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l 324 (606)
T 3t6q_A 255 SVESINLQKHYFFNISSN---------TFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNF 324 (606)
T ss_dssp EEEEEECTTCCCSSCCTT---------TTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGC
T ss_pred ceeEEEeecCccCccCHH---------HhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhcc
Confidence 688999999887654433 4667889999999999887 677788999999999999999988888888999
Q ss_pred CCCcEEEeecCCCCCCCcc-ccCCCCCCCEEEccCCcCCccC--CcccCCCCCCcEEeccccccccCCCC-CCCCCcCCE
Q 006145 155 TSLQTLILDENMLAGRVPD-WLGSLPILAVLSLRNNMFNGTL--PDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQV 230 (659)
Q Consensus 155 ~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~ 230 (659)
++|++|++++|.+.+.+|. .+..+++|++|++++|.+++.. |..+..+++|++|++++|++++..|. |..+++|++
T Consensus 325 ~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 404 (606)
T 3t6q_A 325 PSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLEL 404 (606)
T ss_dssp TTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSE
T ss_pred CcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCe
Confidence 9999999999998877765 4888999999999999988765 77888999999999999998887765 888899999
Q ss_pred EEcccCCCCCCCCCC----CcccceEecCCCcCCccCchhccCCccccEEeccCcccccC---CchhhcCCCcccEEecc
Q 006145 231 LDLENNALGPQFPKV----GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGP---FPQALLSLPSITYLNIA 303 (659)
Q Consensus 231 L~L~~N~l~~~~~~~----~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~l~~l~~L~~L~l~ 303 (659)
|++++|.+.+..+.. +++|+.|++++|.+++..|..+..+++|+.|++++|++++. .+..+..+++|+.|+++
T Consensus 405 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls 484 (606)
T 3t6q_A 405 LDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLS 484 (606)
T ss_dssp EECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECT
T ss_pred EECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECC
Confidence 999999988766542 57889999999999888888889999999999999998862 34678889999999999
Q ss_pred CCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCccccCC
Q 006145 304 DNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAG 358 (659)
Q Consensus 304 ~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~~~ 358 (659)
+|++++..|..+..+++|+.|++++|++++.+|..+..++.+ .+++++|.+++.
T Consensus 485 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~ 538 (606)
T 3t6q_A 485 FCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISII 538 (606)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCC
T ss_pred CCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCccccc
Confidence 999998888889899999999999999999888888888888 899999988853
No 35
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.97 E-value=1.2e-32 Score=308.43 Aligned_cols=170 Identities=18% Similarity=0.274 Sum_probs=152.2
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCce
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 554 (659)
.++|+..+.||+|+||+||+|+.+ +|+.||||++........+.+.+|+++|+.++|||||++++++.+ .+.
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-------~~~ 228 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFED-------DNE 228 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEC-------SSE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEE-------CCE
Confidence 367889999999999999999965 599999999976554445679999999999999999999999976 567
Q ss_pred eEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCC--cceEEccCcc
Q 006145 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN--LVAKISSYNL 632 (659)
Q Consensus 555 ~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~--~~~kl~DFGl 632 (659)
.|||||||++|+|.+++... ...+++.+...++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+
T Consensus 229 ~~iv~E~~~gg~L~~~i~~~--~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~ 303 (573)
T 3uto_A 229 MVMIYEFMSGGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGL 303 (573)
T ss_dssp EEEEEECCCCCBHHHHHTCT--TSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSS
T ss_pred EEEEEeecCCCcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccc
Confidence 99999999999999999743 24699999999999999999999998 99999999999999854 8999999999
Q ss_pred ccccccccccceecccccccCCCCC
Q 006145 633 PLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
|+...........+||+.|||||++
T Consensus 304 a~~~~~~~~~~~~~GT~~y~APEv~ 328 (573)
T 3uto_A 304 TAHLDPKQSVKVTTGTAEFAAPEVA 328 (573)
T ss_dssp CEECCTTSEEEEECSSGGGCCHHHH
T ss_pred eeEccCCCceeeeEECccccCHHHh
Confidence 9988777777788999999999975
No 36
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.97 E-value=4.5e-31 Score=300.80 Aligned_cols=303 Identities=24% Similarity=0.271 Sum_probs=219.3
Q ss_pred CCCCCCCCC----CCCcCCCCCCCceEeCC-----------CCEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEE
Q 006145 48 VLSSWNITT----EFCNTEPTSSLTVVCYE-----------ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVL 112 (659)
Q Consensus 48 ~l~~W~~~~----~~C~w~~~~~~gv~C~~-----------~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L 112 (659)
.+++|+.+. ++|.+. .+...|.|.. ..++.|||++|+++...+. .|.++++|++|
T Consensus 12 ~~~~~~~~~p~~~~~c~~~-~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~---------~f~~l~~L~~L 81 (635)
T 4g8a_A 12 KLAAANSSIPESWEPCVEV-VPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSY---------SFFSFPELQVL 81 (635)
T ss_dssp -------------CCSEEE-ETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTT---------TTTTCTTCCEE
T ss_pred hhhcccCCCCCCCCCcccc-CCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHH---------HHhCCCCCCEE
Confidence 466665432 345442 1234688953 2689999999988754443 46678888888
Q ss_pred EecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCC
Q 006145 113 RLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFN 192 (659)
Q Consensus 113 ~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 192 (659)
+|++|++++..|++|.+|++|++|+|++|+|++..|..|.++++|++|+|++|++++..+..|+++++|++|+|++|.++
T Consensus 82 ~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~ 161 (635)
T 4g8a_A 82 DLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQ 161 (635)
T ss_dssp ECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccc
Confidence 88888888888888888888888888888888776777888888888888888888776677888888888888888886
Q ss_pred c-cCCcccCCCCCCcEEeccccccccCCCC-C------------------------------------------------
Q 006145 193 G-TLPDSFSYLENLRVLALSNNHFYGEVPD-F------------------------------------------------ 222 (659)
Q Consensus 193 ~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~------------------------------------------------ 222 (659)
+ .+|..++.+++|++|+|++|++++..+. |
T Consensus 162 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~ 241 (635)
T 4g8a_A 162 SFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVM 241 (635)
T ss_dssp CCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHH
T ss_pred cCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhccccccccc
Confidence 5 4677788888888888888766432210 0
Q ss_pred --------------------------------------------------------------------------------
Q 006145 223 -------------------------------------------------------------------------------- 222 (659)
Q Consensus 223 -------------------------------------------------------------------------------- 222 (659)
T Consensus 242 ~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~ 321 (635)
T 4g8a_A 242 KTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERV 321 (635)
T ss_dssp HHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEEC
T ss_pred chhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccc
Confidence
Q ss_pred ----------------------------------------------CCCCcCCEEEcccCCCCCC--C------------
Q 006145 223 ----------------------------------------------SGLTYLQVLDLENNALGPQ--F------------ 242 (659)
Q Consensus 223 ----------------------------------------------~~l~~L~~L~L~~N~l~~~--~------------ 242 (659)
..+++|+.|++++|.+... .
T Consensus 322 ~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~ 401 (635)
T 4g8a_A 322 KDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKY 401 (635)
T ss_dssp GGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCE
T ss_pred cccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchhhhhhhhh
Confidence 0123344444444443210 0
Q ss_pred -----------------------------------C----CCCcccceEecCCCcCCccCchhccCCccccEEeccCccc
Q 006145 243 -----------------------------------P----KVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRF 283 (659)
Q Consensus 243 -----------------------------------~----~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 283 (659)
+ ....++..++++.|.+.+..|..+..+++|+.|+|++|++
T Consensus 402 L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~ 481 (635)
T 4g8a_A 402 LDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSF 481 (635)
T ss_dssp EECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEE
T ss_pred hhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhccc
Confidence 0 0013456677778888888888888888999999988875
Q ss_pred c-cCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCccccCCCC
Q 006145 284 V-GPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAGNE 360 (659)
Q Consensus 284 ~-~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~~~~~ 360 (659)
. +.+|..|..+++|++|+|++|++++..|..|..+++|+.|+|++|+|++..|..+..+++|+.+++++|.+++..+
T Consensus 482 ~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~ 559 (635)
T 4g8a_A 482 QENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKK 559 (635)
T ss_dssp GGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCS
T ss_pred ccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCH
Confidence 4 4567888888899999999999988888888888999999999999988888888888889999999998887654
No 37
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.97 E-value=2.7e-31 Score=301.70 Aligned_cols=273 Identities=23% Similarity=0.224 Sum_probs=251.1
Q ss_pred CCEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChh-cc
Q 006145 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQE-LS 152 (659)
Q Consensus 74 ~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~ 152 (659)
.+++.|++++|.+. .+ |..+.++++|++|++++|.+.+..|..+.++++|+.|++++|.+.+.+|.. +.
T Consensus 278 ~~L~~L~l~~n~l~-~l---------p~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~ 347 (606)
T 3t6q_A 278 SGLQELDLTATHLS-EL---------PSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLE 347 (606)
T ss_dssp TTCSEEECTTSCCS-CC---------CSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTT
T ss_pred cCCCEEeccCCccC-CC---------ChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhh
Confidence 47899999999876 33 446788999999999999999999999999999999999999999887765 89
Q ss_pred CCCCCcEEEeecCCCCCCC--ccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEeccccccccCCCC--CCCCCcC
Q 006145 153 ILTSLQTLILDENMLAGRV--PDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYL 228 (659)
Q Consensus 153 ~l~~L~~L~Ls~N~l~~~~--p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~l~~L 228 (659)
++++|++|++++|.+.+.. |..+..+++|++|++++|.+.+..|..|..+++|+.|++++|++++..+. +..+++|
T Consensus 348 ~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 427 (606)
T 3t6q_A 348 NLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLL 427 (606)
T ss_dssp TCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTC
T ss_pred ccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccC
Confidence 9999999999999998776 78899999999999999999999999999999999999999999987654 8999999
Q ss_pred CEEEcccCCCCCCCCCC---CcccceEecCCCcCCcc---CchhccCCccccEEeccCcccccCCchhhcCCCcccEEec
Q 006145 229 QVLDLENNALGPQFPKV---GKKLVTMILSKNKFRSA---IPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNI 302 (659)
Q Consensus 229 ~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l 302 (659)
++|++++|.+++..|.. +++|++|++++|++++. .+..+..+++|+.|++++|++++..|..|..+++|+.|+|
T Consensus 428 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 507 (606)
T 3t6q_A 428 KVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDL 507 (606)
T ss_dssp CEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEEC
Confidence 99999999999888765 57899999999999873 3467899999999999999999999999999999999999
Q ss_pred cCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCccccC
Q 006145 303 ADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (659)
Q Consensus 303 ~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~~ 357 (659)
++|++++..|..+..++.| .|++++|++++.+|..+..+++++.+++++|.+.+
T Consensus 508 s~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 561 (606)
T 3t6q_A 508 SHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDC 561 (606)
T ss_dssp CSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEEC
T ss_pred CCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccc
Confidence 9999999999999999999 99999999999989889999999999999999875
No 38
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=1.8e-30 Score=272.21 Aligned_cols=266 Identities=20% Similarity=0.230 Sum_probs=231.7
Q ss_pred EeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCC
Q 006145 76 ITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILT 155 (659)
Q Consensus 76 v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 155 (659)
++.++++++.+. .+|. .+. ++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.+++
T Consensus 33 l~~l~~~~~~l~-~lp~---------~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 100 (330)
T 1xku_A 33 LRVVQCSDLGLE-KVPK---------DLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLV 100 (330)
T ss_dssp TTEEECTTSCCC-SCCC---------SCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCT
T ss_pred CeEEEecCCCcc-ccCc---------cCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCC
Confidence 455677766554 2332 222 5899999999999998888999999999999999999988899999999
Q ss_pred CCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEecccccccc--CCC-CCCCCCcCCEEE
Q 006145 156 SLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYG--EVP-DFSGLTYLQVLD 232 (659)
Q Consensus 156 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p-~~~~l~~L~~L~ 232 (659)
+|++|+|++|+++ .+|..+. ++|++|++++|.+++..+..|.++++|+.|++++|.++. ..+ .+.++++|++|+
T Consensus 101 ~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~ 177 (330)
T 1xku_A 101 KLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIR 177 (330)
T ss_dssp TCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEE
T ss_pred CCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEE
Confidence 9999999999998 5676654 799999999999998888889999999999999999964 444 388999999999
Q ss_pred cccCCCCCCCCCCCcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCC
Q 006145 233 LENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLF 312 (659)
Q Consensus 233 L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 312 (659)
+++|.++.......++|+.|++++|++++..|..+..+++|+.|+|++|.+++..+..+..+++|+.|++++|+++ .+|
T Consensus 178 l~~n~l~~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp 256 (330)
T 1xku_A 178 IADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVP 256 (330)
T ss_dssp CCSSCCCSCCSSCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCC
T ss_pred CCCCccccCCccccccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCC
Confidence 9999998766666789999999999999999999999999999999999999888889999999999999999999 788
Q ss_pred cCCCCCCCCCEEECcCCCCcccCChhhhC------CCCCCEEEcCCccccC
Q 006145 313 DDLSCNPELGFVDLSSNLLTGQLPNCLLA------GSKNRVVLYARNCLAA 357 (659)
Q Consensus 313 ~~~~~~~~L~~L~ls~N~l~g~ip~~~~~------~~~l~~l~~~~N~l~~ 357 (659)
..+..+++|+.|++++|++++..+..+.. ...+..+++.+|.+..
T Consensus 257 ~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 257 GGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp TTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred hhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccc
Confidence 88999999999999999999765555533 3567889999998763
No 39
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=1.7e-30 Score=272.70 Aligned_cols=264 Identities=22% Similarity=0.234 Sum_probs=230.0
Q ss_pred EeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCC
Q 006145 76 ITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILT 155 (659)
Q Consensus 76 v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 155 (659)
++.++++++.+. .+|. .+ .++|+.|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.+++
T Consensus 35 l~~l~~~~~~l~-~ip~---------~~--~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 102 (332)
T 2ft3_A 35 LRVVQCSDLGLK-AVPK---------EI--SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLR 102 (332)
T ss_dssp TTEEECCSSCCS-SCCS---------CC--CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCT
T ss_pred CCEEECCCCCcc-ccCC---------CC--CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcC
Confidence 456777776654 3333 22 26899999999999998899999999999999999999988899999999
Q ss_pred CCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEecccccccc--CCCC-CCCCCcCCEEE
Q 006145 156 SLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYG--EVPD-FSGLTYLQVLD 232 (659)
Q Consensus 156 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~-~~~l~~L~~L~ 232 (659)
+|++|+|++|+++ .+|..+. ++|++|++++|.+++..+..|.++++|+.|++++|.++. ..+. +..+ +|++|+
T Consensus 103 ~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~ 178 (332)
T 2ft3_A 103 KLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLR 178 (332)
T ss_dssp TCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCB
T ss_pred CCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEE
Confidence 9999999999998 6776655 899999999999997777789999999999999999963 4454 7777 999999
Q ss_pred cccCCCCCCCCCCCcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCC
Q 006145 233 LENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLF 312 (659)
Q Consensus 233 L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 312 (659)
+++|.+++......++|+.|++++|.+++..|..+..+++|+.|+|++|++++..|..+..+++|+.|++++|+++ .+|
T Consensus 179 l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp 257 (332)
T 2ft3_A 179 ISEAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVP 257 (332)
T ss_dssp CCSSBCSSCCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCC
T ss_pred CcCCCCCccCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecC
Confidence 9999999866666789999999999999988899999999999999999999988889999999999999999999 788
Q ss_pred cCCCCCCCCCEEECcCCCCcccCChhhhC------CCCCCEEEcCCcccc
Q 006145 313 DDLSCNPELGFVDLSSNLLTGQLPNCLLA------GSKNRVVLYARNCLA 356 (659)
Q Consensus 313 ~~~~~~~~L~~L~ls~N~l~g~ip~~~~~------~~~l~~l~~~~N~l~ 356 (659)
..+..+++|+.|++++|++++..+..+.. ...+..+++.+|.+.
T Consensus 258 ~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 258 AGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVP 307 (332)
T ss_dssp TTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSC
T ss_pred hhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCccc
Confidence 88999999999999999999766665544 356788999999876
No 40
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.97 E-value=1.3e-30 Score=306.96 Aligned_cols=289 Identities=19% Similarity=0.181 Sum_probs=207.9
Q ss_pred eEeCCCCEeEEEeCCCCCCCCCCCCCc---------------CCcc-cccccCCCCCCEEEecCCCCcCCCCcccCCCCC
Q 006145 69 VVCYEESITQLHIVGNKRAPMLPLSFS---------------MDSF-VTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSS 132 (659)
Q Consensus 69 v~C~~~~v~~L~l~~~~~~~~l~~~~~---------------~~~~-~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 132 (659)
|.+...+++.|+|++|.+.+..|..|. ...+ +..+.++++|++|+|++|.+++..|..|+++++
T Consensus 19 vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~ 98 (844)
T 3j0a_A 19 VPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFH 98 (844)
T ss_dssp CCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSS
T ss_pred CCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcc
Confidence 444346789999999988765554321 1122 344666666666666666666666666666666
Q ss_pred CcEEEcccCcCcccCChh--ccCCCCCcEEEeecCCCCCCCc-cccCCCCCCCEEEccCCcCCccCCcccCCC--CCCcE
Q 006145 133 LEILNMSSNFLNGAIPQE--LSILTSLQTLILDENMLAGRVP-DWLGSLPILAVLSLRNNMFNGTLPDSFSYL--ENLRV 207 (659)
Q Consensus 133 L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~ 207 (659)
|++|+|++|.+++.+|.. |.++++|++|+|++|.+++..| ..|+++++|++|+|++|.+++..|..+..+ ++|+.
T Consensus 99 L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~ 178 (844)
T 3j0a_A 99 LFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSF 178 (844)
T ss_dssp CCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCC
T ss_pred cCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccce
Confidence 666666666666655544 6666666666666666665543 456666666666666666666666666555 56666
Q ss_pred EeccccccccCCCC-CCCCCc------CCEEEcccCCCCCCCCCC-----------------------------------
Q 006145 208 LALSNNHFYGEVPD-FSGLTY------LQVLDLENNALGPQFPKV----------------------------------- 245 (659)
Q Consensus 208 L~Ls~N~l~~~~p~-~~~l~~------L~~L~L~~N~l~~~~~~~----------------------------------- 245 (659)
|++++|.+.+..|. +..+.+ |+.|++++|.+++..+..
T Consensus 179 L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~ 258 (844)
T 3j0a_A 179 FSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQN 258 (844)
T ss_dssp CEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGT
T ss_pred EECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChh
Confidence 66666666655443 444443 888888888776544321
Q ss_pred ------CcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCC
Q 006145 246 ------GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNP 319 (659)
Q Consensus 246 ------~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~ 319 (659)
..+|+.|++++|.+.+..|..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++..|..+..++
T Consensus 259 ~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 338 (844)
T 3j0a_A 259 TFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLP 338 (844)
T ss_dssp TTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCT
T ss_pred hhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCC
Confidence 14688899999999888888899999999999999999988888899999999999999999988888899999
Q ss_pred CCCEEECcCCCCcccCChhhhCCCCCCEEEcCCccccC
Q 006145 320 ELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (659)
Q Consensus 320 ~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~~ 357 (659)
+|+.|++++|++++..|..+..+++|+.+++++|.+++
T Consensus 339 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 339 KVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp TCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred CCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 99999999999987777778888888888888887764
No 41
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=5.4e-30 Score=268.50 Aligned_cols=265 Identities=19% Similarity=0.213 Sum_probs=230.4
Q ss_pred CEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCC
Q 006145 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSIL 154 (659)
Q Consensus 75 ~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 154 (659)
.++.|++++|++.+..+. .+.++++|++|+|++|.+++..|..|.++++|++|+|++|.++ .+|..+.
T Consensus 53 ~l~~L~L~~n~i~~~~~~---------~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~-- 120 (330)
T 1xku_A 53 DTALLDLQNNKITEIKDG---------DFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP-- 120 (330)
T ss_dssp TCCEEECCSSCCCCBCTT---------TTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--
T ss_pred CCeEEECCCCcCCEeChh---------hhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--
Confidence 578899999987754332 5778999999999999999999999999999999999999998 6676654
Q ss_pred CCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCc--cCCcccCCCCCCcEEeccccccccCCCCCCCCCcCCEEE
Q 006145 155 TSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNG--TLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLD 232 (659)
Q Consensus 155 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ 232 (659)
++|++|++++|.+++..+..+..+++|++|++++|.+.. ..+..|.++++|+.|++++|.++..+..+. ++|++|+
T Consensus 121 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~--~~L~~L~ 198 (330)
T 1xku_A 121 KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLP--PSLTELH 198 (330)
T ss_dssp TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCC--TTCSEEE
T ss_pred ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCcccc--ccCCEEE
Confidence 899999999999998888899999999999999999964 788899999999999999999987555443 8999999
Q ss_pred cccCCCCCCCCCC---CcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCC
Q 006145 233 LENNALGPQFPKV---GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG 309 (659)
Q Consensus 233 L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 309 (659)
+++|.+++..|.. +++|+.|++++|.+++..+..+..+++|+.|+|++|+++ .+|..+..+++|++|++++|++++
T Consensus 199 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~ 277 (330)
T 1xku_A 199 LDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISA 277 (330)
T ss_dssp CTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCC
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCc
Confidence 9999999876654 578999999999999988889999999999999999999 789999999999999999999998
Q ss_pred cCCcCCCC------CCCCCEEECcCCCCcc--cCChhhhCCCCCCEEEcCCcc
Q 006145 310 KLFDDLSC------NPELGFVDLSSNLLTG--QLPNCLLAGSKNRVVLYARNC 354 (659)
Q Consensus 310 ~~p~~~~~------~~~L~~L~ls~N~l~g--~ip~~~~~~~~l~~l~~~~N~ 354 (659)
..+..+.. .+.|+.+++++|.+.. ..|..+..+..++.+++++|+
T Consensus 278 ~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 278 IGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred cChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 77776643 3788999999999863 456677778889999998874
No 42
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=3.6e-30 Score=270.16 Aligned_cols=264 Identities=21% Similarity=0.240 Sum_probs=230.6
Q ss_pred CEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCC
Q 006145 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSIL 154 (659)
Q Consensus 75 ~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 154 (659)
+++.|++++|.+.+..| ..+.++++|++|+|++|.+++..|..|.++++|++|+|++|.++ .+|..+.
T Consensus 55 ~l~~L~l~~n~i~~~~~---------~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~-- 122 (332)
T 2ft3_A 55 DTTLLDLQNNDISELRK---------DDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP-- 122 (332)
T ss_dssp TCCEEECCSSCCCEECT---------TTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--
T ss_pred CCeEEECCCCcCCccCH---------hHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--
Confidence 57899999988764433 35778999999999999999999999999999999999999998 6776655
Q ss_pred CCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCC--ccCCcccCCCCCCcEEeccccccccCCCCCCCCCcCCEEE
Q 006145 155 TSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFN--GTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLD 232 (659)
Q Consensus 155 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ 232 (659)
++|++|++++|++.+..+..|..+++|+.|++++|.++ +..|..+..+ +|+.|++++|++++.+..+. ++|++|+
T Consensus 123 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~--~~L~~L~ 199 (332)
T 2ft3_A 123 SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLP--ETLNELH 199 (332)
T ss_dssp TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSC--SSCSCCB
T ss_pred ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCcccc--CCCCEEE
Confidence 89999999999999777778999999999999999996 4788889888 99999999999998655554 7999999
Q ss_pred cccCCCCCCCCCC---CcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCC
Q 006145 233 LENNALGPQFPKV---GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG 309 (659)
Q Consensus 233 L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 309 (659)
+++|.+++..+.. +++|+.|++++|++++..|..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|++++
T Consensus 200 l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~ 278 (332)
T 2ft3_A 200 LDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITK 278 (332)
T ss_dssp CCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCB
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCc
Confidence 9999999887654 578999999999999988889999999999999999999 789999999999999999999998
Q ss_pred cCCcCCCC------CCCCCEEECcCCCCc--ccCChhhhCCCCCCEEEcCCcc
Q 006145 310 KLFDDLSC------NPELGFVDLSSNLLT--GQLPNCLLAGSKNRVVLYARNC 354 (659)
Q Consensus 310 ~~p~~~~~------~~~L~~L~ls~N~l~--g~ip~~~~~~~~l~~l~~~~N~ 354 (659)
..+..+.. .+.|+.|++++|.+. +..|..+..+++++.+++++|.
T Consensus 279 ~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 279 VGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 77776654 367899999999998 6677788889999999998874
No 43
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.97 E-value=1.7e-30 Score=289.63 Aligned_cols=269 Identities=19% Similarity=0.226 Sum_probs=164.6
Q ss_pred CCEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccC
Q 006145 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (659)
Q Consensus 74 ~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (659)
.+++.|++++|.+.+..| ..+.++++|++|+|++|.+++..|..|+++++|++|+|++|+++ .+|.. .
T Consensus 21 ~~L~~L~Ls~n~i~~~~~---------~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~ 88 (520)
T 2z7x_B 21 QKTTILNISQNYISELWT---------SDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--P 88 (520)
T ss_dssp TTCSEEECCSSCCCCCCH---------HHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--C
T ss_pred ccccEEECCCCcccccCh---------hhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--c
Confidence 467778888777664433 23455566666666666665555556666666666666666655 34443 5
Q ss_pred CCCCcEEEeecCCCCC-CCccccCCCCCCCEEEccCCcC-------------------------CccCCcccCCCC----
Q 006145 154 LTSLQTLILDENMLAG-RVPDWLGSLPILAVLSLRNNMF-------------------------NGTLPDSFSYLE---- 203 (659)
Q Consensus 154 l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~L~~N~l-------------------------~~~~p~~~~~l~---- 203 (659)
+++|++|+|++|.+++ .+|..|+++++|++|++++|.+ .+..|..+..++
T Consensus 89 l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l 168 (520)
T 2z7x_B 89 TVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESL 168 (520)
T ss_dssp CCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGGGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEE
T ss_pred cCCccEEeccCCccccccchhhhccCCcceEEEecCcccchhhccccccceeeEEEeecccccccccccccccccccceE
Confidence 5556666666665554 3455555555555555555554 344454444422
Q ss_pred -------------------------------------------------------------------------------C
Q 006145 204 -------------------------------------------------------------------------------N 204 (659)
Q Consensus 204 -------------------------------------------------------------------------------~ 204 (659)
+
T Consensus 169 ~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~ 248 (520)
T 2z7x_B 169 HIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTT 248 (520)
T ss_dssp EEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSS
T ss_pred EEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCc
Confidence 5
Q ss_pred CcEEeccccccccCCCC-C-----CCCCcCCEEEcccCCC--------------------------CCCC-CCCCcccce
Q 006145 205 LRVLALSNNHFYGEVPD-F-----SGLTYLQVLDLENNAL--------------------------GPQF-PKVGKKLVT 251 (659)
Q Consensus 205 L~~L~Ls~N~l~~~~p~-~-----~~l~~L~~L~L~~N~l--------------------------~~~~-~~~~~~L~~ 251 (659)
|++|++++|+++|.+|. + ..+++|+.+++++|.+ .+.. +..+++|++
T Consensus 249 L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~ 328 (520)
T 2z7x_B 249 VWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLH 328 (520)
T ss_dssp CSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCE
T ss_pred ccEEEeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccE
Confidence 66666666666655554 3 4444444444443333 2111 134567778
Q ss_pred EecCCCcCCccCchhccCCccccEEeccCccccc--CCchhhcCCCcccEEeccCCcCCCcCCc-CCCCCCCCCEEECcC
Q 006145 252 MILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVG--PFPQALLSLPSITYLNIADNKLTGKLFD-DLSCNPELGFVDLSS 328 (659)
Q Consensus 252 L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~L~~L~ls~ 328 (659)
|++++|++++.+|..++.+++|+.|+|++|++++ .+|..+..+++|++|++++|++++.+|. .+..+++|+.|++++
T Consensus 329 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~ 408 (520)
T 2z7x_B 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSS 408 (520)
T ss_dssp EECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCS
T ss_pred EEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcC
Confidence 8888888877777777788888888888888776 5566777788888888888888775554 366667777777777
Q ss_pred CCCcccCChhhhCCCCCCEEEcCCcccc
Q 006145 329 NLLTGQLPNCLLAGSKNRVVLYARNCLA 356 (659)
Q Consensus 329 N~l~g~ip~~~~~~~~l~~l~~~~N~l~ 356 (659)
|++++.+|..+. ++++.+++++|.++
T Consensus 409 N~l~~~~~~~l~--~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 409 NILTDTIFRCLP--PRIKVLDLHSNKIK 434 (520)
T ss_dssp SCCCGGGGGSCC--TTCCEEECCSSCCC
T ss_pred CCCCcchhhhhc--ccCCEEECCCCccc
Confidence 777666665543 45666666666665
No 44
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.97 E-value=2.9e-30 Score=297.32 Aligned_cols=275 Identities=19% Similarity=0.175 Sum_probs=207.5
Q ss_pred CCEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccC
Q 006145 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (659)
Q Consensus 74 ~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (659)
.+++.|+|++|.+.+..+ ..+.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|++
T Consensus 25 ~~l~~L~Ls~n~l~~~~~---------~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~ 95 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPA---------ANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAF 95 (680)
T ss_dssp TTCSEEECCSSCCCCCCG---------GGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred CCCcEEECCCCCCCCcCH---------HHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhcc
Confidence 368999999988775433 25678889999999999999888888999999999999999998655557889
Q ss_pred CCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEeccccccccCCCC---CCCCCcCCE
Q 006145 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD---FSGLTYLQV 230 (659)
Q Consensus 154 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~l~~L~~ 230 (659)
+++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..|+++++|++|++++|.+++..+. +..+++|++
T Consensus 96 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~ 175 (680)
T 1ziw_A 96 CTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKK 175 (680)
T ss_dssp CTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESE
T ss_pred CCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccE
Confidence 99999999999999877778899999999999999999988888888999999999999998887764 345678888
Q ss_pred EEcccCCCCCCCCCCC------------------------------cccceEecCCCcCCccCchhccCCcc--ccEEec
Q 006145 231 LDLENNALGPQFPKVG------------------------------KKLVTMILSKNKFRSAIPAEVSSYYQ--LQRLDL 278 (659)
Q Consensus 231 L~L~~N~l~~~~~~~~------------------------------~~L~~L~l~~N~l~~~~p~~~~~l~~--L~~L~L 278 (659)
|++++|.+++..|..+ ++|+.|++++|.+++..|..+..++. |+.|+|
T Consensus 176 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~L 255 (680)
T 1ziw_A 176 LELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDL 255 (680)
T ss_dssp EECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEEC
T ss_pred EECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEEC
Confidence 8888888877665421 35667777777777777777776654 777777
Q ss_pred cCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcc-----cCCh----hhhCCCCCCEEE
Q 006145 279 SSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTG-----QLPN----CLLAGSKNRVVL 349 (659)
Q Consensus 279 s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g-----~ip~----~~~~~~~l~~l~ 349 (659)
++|++++..|..|..+++|++|++++|++++..|..+..+++|+.|++++|...+ .+|. .+..+++++.++
T Consensus 256 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~ 335 (680)
T 1ziw_A 256 SYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLN 335 (680)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEE
T ss_pred CCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEE
Confidence 7777777777777777777777777777777666666666666666665554433 2222 344455555555
Q ss_pred cCCccccC
Q 006145 350 YARNCLAA 357 (659)
Q Consensus 350 ~~~N~l~~ 357 (659)
+++|.+++
T Consensus 336 l~~n~l~~ 343 (680)
T 1ziw_A 336 MEDNDIPG 343 (680)
T ss_dssp CCSCCBCC
T ss_pred CCCCccCC
Confidence 55555554
No 45
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.97 E-value=1.8e-30 Score=302.29 Aligned_cols=277 Identities=20% Similarity=0.201 Sum_probs=230.5
Q ss_pred CCEeEEEeCCCCCCC-CCCCCCcC-------Cccccccc--CCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCc-
Q 006145 74 ESITQLHIVGNKRAP-MLPLSFSM-------DSFVTTLV--KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNF- 142 (659)
Q Consensus 74 ~~v~~L~l~~~~~~~-~l~~~~~~-------~~~~~~l~--~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~- 142 (659)
.+++.|+|++|.+.+ .+|..+.. +.+|..+. ++++|++|+|++|.+.+.+|..|++|++|+.|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~ 527 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRG 527 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCC
Confidence 579999999999887 23322211 12666777 99999999999999999999999999999999999998
Q ss_pred Ccc-cCChhccCCC-------CCcEEEeecCCCCCCCcc--ccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEeccc
Q 006145 143 LNG-AIPQELSILT-------SLQTLILDENMLAGRVPD--WLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSN 212 (659)
Q Consensus 143 l~~-~~p~~~~~l~-------~L~~L~Ls~N~l~~~~p~--~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 212 (659)
++| .+|..+++++ +|++|+|++|+++ .+|. .++++++|+.|+|++|.++ .+| .|+++++|+.|+|++
T Consensus 528 lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~ 604 (876)
T 4ecn_A 528 ISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDY 604 (876)
T ss_dssp SCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCS
T ss_pred cccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcC
Confidence 998 8998777665 9999999999999 8998 9999999999999999999 888 899999999999999
Q ss_pred cccccCCCCCCCCCc-CCEEEcccCCCCCCCCCCC-----cccceEecCCCcCCccCchh---cc--CCccccEEeccCc
Q 006145 213 NHFYGEVPDFSGLTY-LQVLDLENNALGPQFPKVG-----KKLVTMILSKNKFRSAIPAE---VS--SYYQLQRLDLSSN 281 (659)
Q Consensus 213 N~l~~~~p~~~~l~~-L~~L~L~~N~l~~~~~~~~-----~~L~~L~l~~N~l~~~~p~~---~~--~l~~L~~L~Ls~N 281 (659)
|+++..++.+..+++ |+.|+|++|.++ .+|... .+|+.|+|++|++.+.+|.. +. .+++|+.|+|++|
T Consensus 605 N~l~~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N 683 (876)
T 4ecn_A 605 NQIEEIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYN 683 (876)
T ss_dssp SCCSCCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSS
T ss_pred CccccchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCC
Confidence 999944446999999 999999999998 555542 34899999999998876643 22 3458999999999
Q ss_pred ccccCCchhh-cCCCcccEEeccCCcCCCcCCcCCCCC--------CCCCEEECcCCCCcccCChhhh--CCCCCCEEEc
Q 006145 282 RFVGPFPQAL-LSLPSITYLNIADNKLTGKLFDDLSCN--------PELGFVDLSSNLLTGQLPNCLL--AGSKNRVVLY 350 (659)
Q Consensus 282 ~l~~~~p~~l-~~l~~L~~L~l~~N~l~~~~p~~~~~~--------~~L~~L~ls~N~l~g~ip~~~~--~~~~l~~l~~ 350 (659)
+++ .+|..+ ..+++|+.|+|++|+++ .+|..+... ++|+.|+|++|+++ .+|..+. .+++|+.|++
T Consensus 684 ~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~L 760 (876)
T 4ecn_A 684 EIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDV 760 (876)
T ss_dssp CCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEEC
T ss_pred cCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEe
Confidence 998 455554 58899999999999998 555544332 28999999999998 7888887 8889999999
Q ss_pred CCccccC
Q 006145 351 ARNCLAA 357 (659)
Q Consensus 351 ~~N~l~~ 357 (659)
++|.+++
T Consensus 761 s~N~L~~ 767 (876)
T 4ecn_A 761 SYNCFSS 767 (876)
T ss_dssp CSSCCSS
T ss_pred CCCCCCc
Confidence 9998885
No 46
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=2.2e-30 Score=271.18 Aligned_cols=214 Identities=21% Similarity=0.225 Sum_probs=171.3
Q ss_pred CCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEE
Q 006145 106 LPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLS 185 (659)
Q Consensus 106 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 185 (659)
.+.++.|+|++|.++ .+|..++++++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..++.+++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 466777777777776 56666777777777777777777 67777777777777777777776 6677777777777777
Q ss_pred ccCCcCCccCCcccCCCCCCcEEeccccccccCCCCCCCCCcCCEEEcccCCCCCCCCCCCcccceEecCCCcCCccCch
Q 006145 186 LRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPA 265 (659)
Q Consensus 186 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~ 265 (659)
|++|++.+.+|..+... .+ ...|.++++|++|+|++|.+ + .+|.
T Consensus 157 L~~n~~~~~~p~~~~~~-----------~~---~~~~~~l~~L~~L~L~~n~l---------------------~-~lp~ 200 (328)
T 4fcg_A 157 IRACPELTELPEPLAST-----------DA---SGEHQGLVNLQSLRLEWTGI---------------------R-SLPA 200 (328)
T ss_dssp EEEETTCCCCCSCSEEE-----------C----CCCEEESTTCCEEEEEEECC---------------------C-CCCG
T ss_pred CCCCCCccccChhHhhc-----------cc---hhhhccCCCCCEEECcCCCc---------------------C-cchH
Confidence 77777766666654421 11 11245677788888777765 3 5778
Q ss_pred hccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCC
Q 006145 266 EVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKN 345 (659)
Q Consensus 266 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l 345 (659)
.++.+++|+.|+|++|++++ +|..+..+++|++|++++|++.+.+|..+..+++|+.|++++|++.+.+|..+..+++|
T Consensus 201 ~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L 279 (328)
T 4fcg_A 201 SIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQL 279 (328)
T ss_dssp GGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTC
T ss_pred hhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCC
Confidence 89999999999999999995 67789999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEcCCccccCCC
Q 006145 346 RVVLYARNCLAAGN 359 (659)
Q Consensus 346 ~~l~~~~N~l~~~~ 359 (659)
+.+++++|.+.+..
T Consensus 280 ~~L~L~~n~~~~~i 293 (328)
T 4fcg_A 280 EKLDLRGCVNLSRL 293 (328)
T ss_dssp CEEECTTCTTCCCC
T ss_pred CEEeCCCCCchhhc
Confidence 99999999988644
No 47
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.97 E-value=3.7e-31 Score=296.88 Aligned_cols=157 Identities=23% Similarity=0.192 Sum_probs=126.7
Q ss_pred CEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCC
Q 006145 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSIL 154 (659)
Q Consensus 75 ~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 154 (659)
+++.|++++|.+.+..|. .+.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++
T Consensus 27 ~L~~L~Ls~n~l~~~~~~---------~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 97 (549)
T 2z81_A 27 AMKSLDLSFNKITYIGHG---------DLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPL 97 (549)
T ss_dssp TCCEEECCSSCCCEECSS---------TTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTC
T ss_pred CccEEECcCCccCccChh---------hhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccC
Confidence 689999999887754443 56788899999999999988888889999999999999999988777778999
Q ss_pred CCCcEEEeecCCCCC-CCccccCCCCCCCEEEccCCcCCccCC-cccCCCCCCcEEeccccccccCCCC-CCC-------
Q 006145 155 TSLQTLILDENMLAG-RVPDWLGSLPILAVLSLRNNMFNGTLP-DSFSYLENLRVLALSNNHFYGEVPD-FSG------- 224 (659)
Q Consensus 155 ~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~------- 224 (659)
++|++|+|++|.+++ .+|..++++++|++|++++|.+.+.+| ..|.++++|++|++++|++++..|. +..
T Consensus 98 ~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 177 (549)
T 2z81_A 98 SSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHL 177 (549)
T ss_dssp TTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEE
T ss_pred CCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceE
Confidence 999999999999886 467788899999999999988544554 6788899999999999988886654 444
Q ss_pred -----------------CCcCCEEEcccCCCCC
Q 006145 225 -----------------LTYLQVLDLENNALGP 240 (659)
Q Consensus 225 -----------------l~~L~~L~L~~N~l~~ 240 (659)
+++|++|++++|.+++
T Consensus 178 ~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 210 (549)
T 2z81_A 178 TLHLSESAFLLEIFADILSSVRYLELRDTNLAR 210 (549)
T ss_dssp EEECSBSTTHHHHHHHSTTTBSEEEEESCBCTT
T ss_pred ecccCcccccchhhHhhcccccEEEccCCcccc
Confidence 4566666677776665
No 48
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.97 E-value=7.1e-30 Score=289.99 Aligned_cols=285 Identities=21% Similarity=0.178 Sum_probs=231.4
Q ss_pred CCEeEEEeCCCCCCCCCCCCCc-----------C---Cc-ccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEc
Q 006145 74 ESITQLHIVGNKRAPMLPLSFS-----------M---DS-FVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNM 138 (659)
Q Consensus 74 ~~v~~L~l~~~~~~~~l~~~~~-----------~---~~-~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 138 (659)
.+++.|++++|.+.+..|..|. . .. .|..+.++++|++|+|++|.+++..+..|+++++|++|+|
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 135 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNV 135 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEEC
T ss_pred ccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeC
Confidence 3566777777666544333221 1 11 2557889999999999999999988889999999999999
Q ss_pred ccCcCcc-cCChhccCCCCCcEEEeecCCCCCCCccccC-----------------------------------------
Q 006145 139 SSNFLNG-AIPQELSILTSLQTLILDENMLAGRVPDWLG----------------------------------------- 176 (659)
Q Consensus 139 s~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~----------------------------------------- 176 (659)
++|.+++ .+|..++++++|++|+|++|++++..|..++
T Consensus 136 ~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~ 215 (606)
T 3vq2_A 136 AHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNF 215 (606)
T ss_dssp CSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCC
T ss_pred CCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCc
Confidence 9999986 6799999999999999999998765443221
Q ss_pred --------------------------------------------------------------------------------
Q 006145 177 -------------------------------------------------------------------------------- 176 (659)
Q Consensus 177 -------------------------------------------------------------------------------- 176 (659)
T Consensus 216 ~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~ 295 (606)
T 3vq2_A 216 NSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGV 295 (606)
T ss_dssp SCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESC
T ss_pred cchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecCc
Confidence
Q ss_pred ----------------------------------------------------CCCCCCEEEccCCcCCcc--CCcccCCC
Q 006145 177 ----------------------------------------------------SLPILAVLSLRNNMFNGT--LPDSFSYL 202 (659)
Q Consensus 177 ----------------------------------------------------~l~~L~~L~L~~N~l~~~--~p~~~~~l 202 (659)
.+++|++|++++|.+++. +|..+..+
T Consensus 296 ~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~ 375 (606)
T 3vq2_A 296 SIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGT 375 (606)
T ss_dssp CCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHCC
T ss_pred cchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhccC
Confidence 123334444444444433 24555566
Q ss_pred CCCcEEeccccccccCCCCCCCCCcCCEEEcccCCCCCCCC-C---CCcccceEecCCCcCCccCchhccCCccccEEec
Q 006145 203 ENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFP-K---VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDL 278 (659)
Q Consensus 203 ~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~-~---~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 278 (659)
++|++|++++|.+++.++.+..+++|++|++++|.+.+..| . .+++|+.|++++|.+++.+|..+..+++|+.|++
T Consensus 376 ~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 455 (606)
T 3vq2_A 376 NSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKM 455 (606)
T ss_dssp SCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEEC
T ss_pred CcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEEC
Confidence 66666666666666655568889999999999999988877 2 2589999999999999999999999999999999
Q ss_pred cCccccc-CCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCccccC
Q 006145 279 SSNRFVG-PFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (659)
Q Consensus 279 s~N~l~~-~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~~ 357 (659)
++|++++ .+|..+..+++|+.|++++|++++..|..+..+++|+.|++++|++++.+|..+..+++++.+++++|.++.
T Consensus 456 ~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 535 (606)
T 3vq2_A 456 AGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET 535 (606)
T ss_dssp TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCC
T ss_pred CCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcc
Confidence 9999998 478899999999999999999999999999999999999999999999999999999999999999999984
Q ss_pred C
Q 006145 358 G 358 (659)
Q Consensus 358 ~ 358 (659)
.
T Consensus 536 ~ 536 (606)
T 3vq2_A 536 S 536 (606)
T ss_dssp E
T ss_pred c
Confidence 3
No 49
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.97 E-value=1.8e-30 Score=289.47 Aligned_cols=262 Identities=19% Similarity=0.176 Sum_probs=210.0
Q ss_pred eEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCC
Q 006145 77 TQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTS 156 (659)
Q Consensus 77 ~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 156 (659)
+.|++++++++ .+|. .+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++
T Consensus 3 ~~l~ls~n~l~-~ip~---------~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 70 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPK---------DLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQE 70 (520)
T ss_dssp CEEECTTSCCS-SCCC---------SCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTT
T ss_pred ceEecCCCCcc-cccc---------ccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccC
Confidence 46888998877 3443 233 79999999999999999999999999999999999999988999999999
Q ss_pred CcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCc-cCCcccCCCCCCcEEeccccccccCCCCCCCCCcC--CEEEc
Q 006145 157 LQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNG-TLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYL--QVLDL 233 (659)
Q Consensus 157 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L--~~L~L 233 (659)
|++|+|++|+++ .+|.. .+++|++|+|++|.+++ .+|..|+++++|++|++++|++++ ..+..+++| ++|++
T Consensus 71 L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~--~~~~~l~~L~L~~L~l 145 (520)
T 2z7x_B 71 LEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK--SSVLPIAHLNISKVLL 145 (520)
T ss_dssp CCEEECCSSCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG--GGGGGGTTSCEEEEEE
T ss_pred CCEEecCCCcee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch--hhccccccceeeEEEe
Confidence 999999999998 57766 89999999999999997 588999999999999999999986 346667777 88888
Q ss_pred ccCCC--CCCCCCCC-----------------------------------------------------------------
Q 006145 234 ENNAL--GPQFPKVG----------------------------------------------------------------- 246 (659)
Q Consensus 234 ~~N~l--~~~~~~~~----------------------------------------------------------------- 246 (659)
++|.+ .+..|..+
T Consensus 146 ~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L 225 (520)
T 2z7x_B 146 VLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNL 225 (520)
T ss_dssp EECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEE
T ss_pred ecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhc
Confidence 88887 44433321
Q ss_pred ---------------------cccceEecCCCcCCccCchhc-----cCCccccEEeccCcccccCCc-hh---------
Q 006145 247 ---------------------KKLVTMILSKNKFRSAIPAEV-----SSYYQLQRLDLSSNRFVGPFP-QA--------- 290 (659)
Q Consensus 247 ---------------------~~L~~L~l~~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~~p-~~--------- 290 (659)
++|++|++++|+++|.+|..+ +.+++|+.+++++|.+ .+| ..
T Consensus 226 ~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~ 303 (520)
T 2z7x_B 226 TLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMN 303 (520)
T ss_dssp EEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCC
T ss_pred cccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCc
Confidence 156677777777777777776 6666666666666655 233 11
Q ss_pred ----------------hcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcc--cCChhhhCCCCCCEEEcCC
Q 006145 291 ----------------LLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTG--QLPNCLLAGSKNRVVLYAR 352 (659)
Q Consensus 291 ----------------l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g--~ip~~~~~~~~l~~l~~~~ 352 (659)
+..+++|++|++++|++++.+|..+..+++|+.|++++|++++ .+|..+..+++++.+++++
T Consensus 304 L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~ 383 (520)
T 2z7x_B 304 IKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQ 383 (520)
T ss_dssp CSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCS
T ss_pred eeEEEcCCCccccccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCC
Confidence 1567788888888888888788888888888888888888886 6667777888888888888
Q ss_pred ccccC
Q 006145 353 NCLAA 357 (659)
Q Consensus 353 N~l~~ 357 (659)
|.+++
T Consensus 384 N~l~~ 388 (520)
T 2z7x_B 384 NSVSY 388 (520)
T ss_dssp SCCBC
T ss_pred CcCCc
Confidence 88775
No 50
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.97 E-value=8.7e-30 Score=286.65 Aligned_cols=266 Identities=21% Similarity=0.233 Sum_probs=171.2
Q ss_pred CCEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccC
Q 006145 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (659)
Q Consensus 74 ~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (659)
.+++.|++++|.+.+..| ..+.++++|++|+|++|.+++..|+.|.++++|++|||++|.++ .+|.. .
T Consensus 52 ~~L~~L~Ls~N~i~~~~~---------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~ 119 (562)
T 3a79_B 52 PRTKALSLSQNSISELRM---------PDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--P 119 (562)
T ss_dssp TTCCEEECCSSCCCCCCG---------GGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--C
T ss_pred CCcCEEECCCCCccccCh---------hhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--c
Confidence 357777777777664433 35677888888888888888888888888888888888888887 56655 7
Q ss_pred CCCCcEEEeecCCCCC-CCccccCCCCCCCEEEccCCcCCccCCcccCCCCCC--cEEecccccc--ccCCCC-CCCCC-
Q 006145 154 LTSLQTLILDENMLAG-RVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENL--RVLALSNNHF--YGEVPD-FSGLT- 226 (659)
Q Consensus 154 l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~~~~p~-~~~l~- 226 (659)
+++|++|+|++|++++ .+|..|+++++|++|+|++|.+++. .+..+++| +.|++++|.+ ++..|. +..+.
T Consensus 120 l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~ 196 (562)
T 3a79_B 120 MASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNT 196 (562)
T ss_dssp CTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCE
T ss_pred cccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCc
Confidence 8888888888888876 3567888888888888888877642 23333333 5555555544 322221 11111
Q ss_pred --------------------------------------------------------------------------------
Q 006145 227 -------------------------------------------------------------------------------- 226 (659)
Q Consensus 227 -------------------------------------------------------------------------------- 226 (659)
T Consensus 197 ~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~ 276 (562)
T 3a79_B 197 TVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPR 276 (562)
T ss_dssp EEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTS
T ss_pred ceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcc
Confidence
Q ss_pred cCCEEEcccCCCCCCCC--------------------------------------------------------CCCcccc
Q 006145 227 YLQVLDLENNALGPQFP--------------------------------------------------------KVGKKLV 250 (659)
Q Consensus 227 ~L~~L~L~~N~l~~~~~--------------------------------------------------------~~~~~L~ 250 (659)
+|++|++++|.+++.+| ...++|+
T Consensus 277 ~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~ 356 (562)
T 3a79_B 277 PVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFT 356 (562)
T ss_dssp SEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCC
T ss_pred cccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCce
Confidence 33344444444333222 2235667
Q ss_pred eEecCCCcCCccCchhccCCccccEEeccCccccc--CCchhhcCCCcccEEeccCCcCCCcCCc-CCCCCCCCCEEECc
Q 006145 251 TMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVG--PFPQALLSLPSITYLNIADNKLTGKLFD-DLSCNPELGFVDLS 327 (659)
Q Consensus 251 ~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~L~~L~ls 327 (659)
+|++++|++++.+|..++++++|+.|+|++|++++ .+|..+..+++|+.|++++|++++.+|. .+..+++|+.|+++
T Consensus 357 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~ 436 (562)
T 3a79_B 357 FLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLS 436 (562)
T ss_dssp EEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECC
T ss_pred EEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECC
Confidence 77777777777777777777777777777777765 2345667777777777777777764443 35566666666666
Q ss_pred CCCCcccCChhhhCCCCCCEEEcCCcccc
Q 006145 328 SNLLTGQLPNCLLAGSKNRVVLYARNCLA 356 (659)
Q Consensus 328 ~N~l~g~ip~~~~~~~~l~~l~~~~N~l~ 356 (659)
+|++++.+|..+. ++++.+++++|.++
T Consensus 437 ~n~l~~~~~~~l~--~~L~~L~L~~N~l~ 463 (562)
T 3a79_B 437 SNMLTGSVFRCLP--PKVKVLDLHNNRIM 463 (562)
T ss_dssp SSCCCGGGGSSCC--TTCSEEECCSSCCC
T ss_pred CCCCCcchhhhhc--CcCCEEECCCCcCc
Confidence 6666665555443 45566666666555
No 51
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.97 E-value=8.6e-30 Score=300.02 Aligned_cols=247 Identities=23% Similarity=0.254 Sum_probs=202.4
Q ss_pred CCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEc
Q 006145 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (659)
Q Consensus 107 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 186 (659)
++|+.|+|++|.+.+..|..|..+++|+.|+|++|.+++..|..|.++++|++|+|++|.+++..|..|..+++|+.|+|
T Consensus 266 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 345 (844)
T 3j0a_A 266 SSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDL 345 (844)
T ss_dssp SCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEEC
T ss_pred CCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEEC
Confidence 67888888888888888888888888899999888888888888888888889999888888888888888888888888
Q ss_pred cCCcCCccCCcccCCCCCCcEEeccccccccCCC------------------C-----------------------CCCC
Q 006145 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP------------------D-----------------------FSGL 225 (659)
Q Consensus 187 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p------------------~-----------------------~~~l 225 (659)
++|.+++..+..|.++++|+.|+|++|.+++... . +.++
T Consensus 346 ~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l 425 (844)
T 3j0a_A 346 QKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRV 425 (844)
T ss_dssp CSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTC
T ss_pred CCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcC
Confidence 8888887777788888888888888888765211 0 2256
Q ss_pred CcCCEEEcccCCCCCCCCC----CCcccceEecCCCcCC-----ccCchhccCCccccEEeccCcccccCCchhhcCCCc
Q 006145 226 TYLQVLDLENNALGPQFPK----VGKKLVTMILSKNKFR-----SAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPS 296 (659)
Q Consensus 226 ~~L~~L~L~~N~l~~~~~~----~~~~L~~L~l~~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 296 (659)
++|++|+|++|.+++..+. ..++|+.|+|++|.++ +..|..|..+++|+.|+|++|+|++..|..|..+++
T Consensus 426 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 505 (844)
T 3j0a_A 426 PHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTA 505 (844)
T ss_dssp TTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCS
T ss_pred CccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhh
Confidence 7788888888888755433 3577888888888886 444566888899999999999999888888899999
Q ss_pred ccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCccccCC
Q 006145 297 ITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAG 358 (659)
Q Consensus 297 L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~~~ 358 (659)
|+.|+|++|++++..+..+. ++|+.|||++|++++.+|..+. ++..+++++|.+.+.
T Consensus 506 L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~---~L~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 506 LRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV---SLSVLDITHNKFICE 562 (844)
T ss_dssp CSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS---SCCEEEEEEECCCCS
T ss_pred hheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC---CcCEEEecCCCcccc
Confidence 99999999999987776665 7899999999999988887653 678899999988764
No 52
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.97 E-value=6.9e-30 Score=287.51 Aligned_cols=265 Identities=20% Similarity=0.151 Sum_probs=196.3
Q ss_pred EeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCC
Q 006145 76 ITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILT 155 (659)
Q Consensus 76 v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 155 (659)
.+.+++++++++. +|. .+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|.+++
T Consensus 33 ~~~l~ls~~~L~~-ip~---------~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 100 (562)
T 3a79_B 33 ESMVDYSNRNLTH-VPK---------DLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQ 100 (562)
T ss_dssp CCEEECTTSCCCS-CCT---------TSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCT
T ss_pred CcEEEcCCCCCcc-CCC---------CCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCC
Confidence 3789999998874 443 222 7899999999999999999999999999999999999999899999999
Q ss_pred CCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCc-cCCcccCCCCCCcEEeccccccccCCCCCCCCCcC--CEEE
Q 006145 156 SLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNG-TLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYL--QVLD 232 (659)
Q Consensus 156 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L--~~L~ 232 (659)
+|++|+|++|+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|++++ ..+..+++| ++|+
T Consensus 101 ~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~--~~~~~l~~L~L~~L~ 175 (562)
T 3a79_B 101 DLEYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ--LDLLPVAHLHLSCIL 175 (562)
T ss_dssp TCCEEECTTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT--TTTGGGTTSCEEEEE
T ss_pred CCCEEECCCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc--CchhhhhhceeeEEE
Confidence 9999999999998 67766 89999999999999997 457899999999999999999986 345566666 9999
Q ss_pred cccCCC--CCCCCCCC----------------------------------------------------------------
Q 006145 233 LENNAL--GPQFPKVG---------------------------------------------------------------- 246 (659)
Q Consensus 233 L~~N~l--~~~~~~~~---------------------------------------------------------------- 246 (659)
+++|.+ ++..|..+
T Consensus 176 L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~ 255 (562)
T 3a79_B 176 LDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVT 255 (562)
T ss_dssp EEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEE
T ss_pred eecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEE
Confidence 999998 55544321
Q ss_pred --------------------cccceEecCCCcCCccCchhc---------------------------------------
Q 006145 247 --------------------KKLVTMILSKNKFRSAIPAEV--------------------------------------- 267 (659)
Q Consensus 247 --------------------~~L~~L~l~~N~l~~~~p~~~--------------------------------------- 267 (659)
.+|++|++++|.++|.+|..+
T Consensus 256 L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~ 335 (562)
T 3a79_B 256 LQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKM 335 (562)
T ss_dssp EEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSE
T ss_pred ecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceE
Confidence 156666777777777676654
Q ss_pred --------------cCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCC--cCCcCCCCCCCCCEEECcCCCC
Q 006145 268 --------------SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG--KLFDDLSCNPELGFVDLSSNLL 331 (659)
Q Consensus 268 --------------~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~--~~p~~~~~~~~L~~L~ls~N~l 331 (659)
..+++|++|++++|++++.+|..+..+++|+.|++++|++++ .+|..+..+++|+.|++++|++
T Consensus 336 L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l 415 (562)
T 3a79_B 336 LSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSL 415 (562)
T ss_dssp EEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCC
T ss_pred EEccCCCcccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcC
Confidence 444555666666666655555555666666666666666554 2234455556666666666666
Q ss_pred cccCChh-hhCCCCCCEEEcCCccccC
Q 006145 332 TGQLPNC-LLAGSKNRVVLYARNCLAA 357 (659)
Q Consensus 332 ~g~ip~~-~~~~~~l~~l~~~~N~l~~ 357 (659)
++.+|.. +..+++++.+++++|.+++
T Consensus 416 ~~~~~~~~~~~l~~L~~L~l~~n~l~~ 442 (562)
T 3a79_B 416 NSHAYDRTCAWAESILVLNLSSNMLTG 442 (562)
T ss_dssp BSCCSSCCCCCCTTCCEEECCSSCCCG
T ss_pred CCccChhhhcCcccCCEEECCCCCCCc
Confidence 5544443 4445555666666665543
No 53
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.97 E-value=1.8e-29 Score=284.40 Aligned_cols=285 Identities=22% Similarity=0.203 Sum_probs=198.0
Q ss_pred CEeEEEeCCCCCCCCCCCCCc--------------CCcc-cccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcc
Q 006145 75 SITQLHIVGNKRAPMLPLSFS--------------MDSF-VTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMS 139 (659)
Q Consensus 75 ~v~~L~l~~~~~~~~l~~~~~--------------~~~~-~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 139 (659)
+++.|++++|.+.+..+..|. ...+ +..+.++++|++|+|++|.+++..|..|+++++|++|+++
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 577888888776644332111 1112 2346677777777777777777777777777777777777
Q ss_pred cCcCcccCChhccCCCCCcEEEeecCCCCC-CCccccCCCCCCCEEEccCCcCCccCCcccCCC----------------
Q 006145 140 SNFLNGAIPQELSILTSLQTLILDENMLAG-RVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYL---------------- 202 (659)
Q Consensus 140 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l---------------- 202 (659)
+|.+++..+..++++++|++|+|++|.+++ .+|..|+++++|++|++++|.+++..|..|+.+
T Consensus 109 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~ 188 (570)
T 2z63_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (570)
T ss_dssp TSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred ccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCC
Confidence 777775544457777777777777777776 467777777778877777777665444333222
Q ss_pred --------------------------------------------------------------------------------
Q 006145 203 -------------------------------------------------------------------------------- 202 (659)
Q Consensus 203 -------------------------------------------------------------------------------- 202 (659)
T Consensus 189 l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~ 268 (570)
T 2z63_A 189 MNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLD 268 (570)
T ss_dssp CCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETT
T ss_pred ceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcch
Confidence
Q ss_pred -------------CCCcEEeccccccccCCCCC------------------------------------------CCCCc
Q 006145 203 -------------ENLRVLALSNNHFYGEVPDF------------------------------------------SGLTY 227 (659)
Q Consensus 203 -------------~~L~~L~Ls~N~l~~~~p~~------------------------------------------~~l~~ 227 (659)
++|+.|++++|.+++.++.+ ..+++
T Consensus 269 ~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~ 348 (570)
T 2z63_A 269 YYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPS 348 (570)
T ss_dssp EEESCSTTTTGGGTTCSEEEEESCEECSCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTT
T ss_pred hhhhhchhhhcCcCcccEEEecCccchhhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCC
Confidence 23333333333332211111 22344
Q ss_pred CCEEEcccCCCCCCC--C------------------------C--CCcccceEecCCCcCCccCc-hhccCCccccEEec
Q 006145 228 LQVLDLENNALGPQF--P------------------------K--VGKKLVTMILSKNKFRSAIP-AEVSSYYQLQRLDL 278 (659)
Q Consensus 228 L~~L~L~~N~l~~~~--~------------------------~--~~~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~L 278 (659)
|++|++++|.+++.. | . .+++|+.|++++|.+.+..| ..+.++++|+.|++
T Consensus 349 L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l 428 (570)
T 2z63_A 349 LEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI 428 (570)
T ss_dssp CCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEEC
T ss_pred CCEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeC
Confidence 455555555443221 0 0 12467777777788777666 56889999999999
Q ss_pred cCcccccCCchhhcCCCcccEEeccCCcCC-CcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCccccC
Q 006145 279 SSNRFVGPFPQALLSLPSITYLNIADNKLT-GKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (659)
Q Consensus 279 s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~-~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~~ 357 (659)
++|.+.+..|..+..+++|+.|++++|.++ +.+|..+..+++|+.|++++|++++..|..+..+++|+.+++++|.+++
T Consensus 429 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 508 (570)
T 2z63_A 429 SHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKS 508 (570)
T ss_dssp TTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred cCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCC
Confidence 999999989999999999999999999998 6788899999999999999999998889999999999999999999886
Q ss_pred CC
Q 006145 358 GN 359 (659)
Q Consensus 358 ~~ 359 (659)
..
T Consensus 509 ~~ 510 (570)
T 2z63_A 509 VP 510 (570)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 54
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=6.8e-30 Score=264.75 Aligned_cols=227 Identities=26% Similarity=0.265 Sum_probs=179.5
Q ss_pred CCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcc--cCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEE
Q 006145 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNG--AIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVL 184 (659)
Q Consensus 107 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 184 (659)
++|++|+|++|.++...+..|.++++|++|+|++|.++. ..|..+..+++|++|+|++|.+. .+|..+..+++|++|
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L 106 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHL 106 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEE
Confidence 579999999999987666678999999999999999983 34777888999999999999997 577789999999999
Q ss_pred EccCCcCCccCC-cccCCCCCCcEEeccccccccCCCC-CCCCCcCCEEEcccCCCCC-CCCCC---CcccceEecCCCc
Q 006145 185 SLRNNMFNGTLP-DSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGP-QFPKV---GKKLVTMILSKNK 258 (659)
Q Consensus 185 ~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~-~~~~~---~~~L~~L~l~~N~ 258 (659)
++++|.+++..+ ..+..+++|++|++++|.+++..+. +.++++|++|++++|.+++ .+|.. +++|+.|++++|+
T Consensus 107 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 186 (306)
T 2z66_A 107 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ 186 (306)
T ss_dssp ECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSC
T ss_pred ECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCC
Confidence 999999987655 5788999999999999999887776 8888999999999888865 33332 4567777777777
Q ss_pred CCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCC-CCCEEECcCCCCccc
Q 006145 259 FRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNP-ELGFVDLSSNLLTGQ 334 (659)
Q Consensus 259 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~-~L~~L~ls~N~l~g~ 334 (659)
+++..|..+..+++|+.|+|++|++++..+..+..+++|+.|++++|++++..|..+..++ +|+.|++++|.+++.
T Consensus 187 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 187 LEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred cCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 7776666777777777777777777766666667777777777777777777666666663 677777777777654
No 55
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.97 E-value=1.5e-30 Score=271.97 Aligned_cols=187 Identities=31% Similarity=0.597 Sum_probs=161.3
Q ss_pred ccccCHHHHHHhhcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCC-chHHHHHHHHHHhCCCCCCccceeeee
Q 006145 464 YRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHC 542 (659)
Q Consensus 464 ~~~~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~ 542 (659)
...++++++....++|...+.||+|+||.||+|+..+|+.||||++...... ...++.+|++++++++||||++++++|
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 3568899999999999999999999999999999888999999999765432 234799999999999999999999999
Q ss_pred eeccccCCCCceeEEEEeccCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecC
Q 006145 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISEGH-AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ 621 (659)
Q Consensus 543 ~~~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~ 621 (659)
.+ .+..++||||+++|+|.++++... ....++|..+..++.|++.||+|||+.+.++|+||||||+||++++
T Consensus 97 ~~-------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~ 169 (326)
T 3uim_A 97 MT-------PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDE 169 (326)
T ss_dssp CC-------SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECT
T ss_pred ec-------CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECC
Confidence 75 456899999999999999998642 2345999999999999999999999988889999999999999999
Q ss_pred CcceEEccCccccccccc--cccceecccccccCCCCC
Q 006145 622 NLVAKISSYNLPLLAENA--EKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 622 ~~~~kl~DFGla~~~~~~--~~~~~~~gt~~y~aPE~~ 657 (659)
++.+||+|||+++..... .......||+.|+|||+.
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 207 (326)
T 3uim_A 170 EFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 207 (326)
T ss_dssp TCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHH
T ss_pred CCCEEeccCccccccCcccccccccccCCcCccCHHHh
Confidence 999999999999866432 223456699999999974
No 56
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=1.7e-29 Score=286.24 Aligned_cols=248 Identities=18% Similarity=0.117 Sum_probs=213.7
Q ss_pred ccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCC
Q 006145 101 TTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPI 180 (659)
Q Consensus 101 ~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 180 (659)
..+.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|+|++|.+++..|..|+.+++
T Consensus 93 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 172 (597)
T 3oja_B 93 YAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTS 172 (597)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTT
T ss_pred HHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCc
Confidence 47889999999999999999999999999999999999999999766666899999999999999999999999999999
Q ss_pred CCEEEccCCcCCccCCcccCCCCCCcEEecccccccc-------------------CCCCCCCCCcCCEEEcccCCCCCC
Q 006145 181 LAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYG-------------------EVPDFSGLTYLQVLDLENNALGPQ 241 (659)
Q Consensus 181 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-------------------~~p~~~~l~~L~~L~L~~N~l~~~ 241 (659)
|++|+|++|.+++.. ++.+++|+.|++++|.+++ ..+.+ .++|+.|+|++|.+++.
T Consensus 173 L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~--~~~L~~L~L~~n~l~~~ 247 (597)
T 3oja_B 173 LQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPV--NVELTILKLQHNNLTDT 247 (597)
T ss_dssp CCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSC--CSCCCEEECCSSCCCCC
T ss_pred CcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccccCCchhheeeccCCccccccccc--CCCCCEEECCCCCCCCC
Confidence 999999999999753 3445566666666655544 22222 36899999999999875
Q ss_pred CCC-CCcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCC
Q 006145 242 FPK-VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPE 320 (659)
Q Consensus 242 ~~~-~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~ 320 (659)
..- .+++|+.|+|++|.+++.+|..|+.+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..+++
T Consensus 248 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~ 325 (597)
T 3oja_B 248 AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDR 325 (597)
T ss_dssp GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTT
T ss_pred hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCC
Confidence 211 26899999999999999999999999999999999999996 6888889999999999999999 57777888999
Q ss_pred CCEEECcCCCCcccCChhhhCCCCCCEEEcCCccccCC
Q 006145 321 LGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAG 358 (659)
Q Consensus 321 L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~~~ 358 (659)
|+.|+|++|.+++. | +..+++++.+++++|.+++.
T Consensus 326 L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 326 LENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp CSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHH
T ss_pred CCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCCh
Confidence 99999999999864 3 55678899999999998753
No 57
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=5.8e-29 Score=272.27 Aligned_cols=226 Identities=23% Similarity=0.199 Sum_probs=197.1
Q ss_pred CCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEc
Q 006145 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (659)
Q Consensus 107 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 186 (659)
++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 58999999999999999999999999999999999999988899999999999999999999877788999999999999
Q ss_pred cCCcCCccCCcccCCCCCCcEEeccccccccCCC-C-CCCCCcCCEEEcccCCCCCCCCCC--CcccceEecCCCcCCcc
Q 006145 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP-D-FSGLTYLQVLDLENNALGPQFPKV--GKKLVTMILSKNKFRSA 262 (659)
Q Consensus 187 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~-~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~ 262 (659)
++|.+++..+..|.++++|+.|+|++|+..+.++ . |.++++|++|+|++|.+++. |.. +.+|+.|+|++|++++.
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~ 233 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PNLTPLVGLEELEMSGNHFPEI 233 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CCCTTCTTCCEEECTTSCCSEE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-ccccccccccEEECcCCcCccc
Confidence 9999998777889999999999999955444444 3 89999999999999999865 332 46788888888888888
Q ss_pred CchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcc
Q 006145 263 IPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTG 333 (659)
Q Consensus 263 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g 333 (659)
.|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+.-
T Consensus 234 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 234 RPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp CGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred CcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 88888888888888888888888778888888888888888888887777777888888888888887763
No 58
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=6.3e-30 Score=270.62 Aligned_cols=250 Identities=22% Similarity=0.239 Sum_probs=189.6
Q ss_pred CCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEc
Q 006145 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (659)
Q Consensus 107 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 186 (659)
++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..++++++|++|+|
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 131 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNL 131 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEEC
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEEC
Confidence 47888888888888777778888888888888888888777778888888888888888888655556888888888888
Q ss_pred cCCcCCccCC-cccCCCCCCcEEeccccc-cccCCCC-CCCCCcCCEEEcccCCCCCCCCCC---CcccceEecCCCcCC
Q 006145 187 RNNMFNGTLP-DSFSYLENLRVLALSNNH-FYGEVPD-FSGLTYLQVLDLENNALGPQFPKV---GKKLVTMILSKNKFR 260 (659)
Q Consensus 187 ~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~-l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~ 260 (659)
++|.+++..+ ..|.++++|++|++++|+ +.+..+. |.++++|++|++++|.+++..|.. +++|++|++++|.+.
T Consensus 132 ~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 211 (353)
T 2z80_A 132 LGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI 211 (353)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST
T ss_pred CCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc
Confidence 8888884433 367888888888888884 5555443 788888888888888887776654 467888888888886
Q ss_pred ccCchhccCCccccEEeccCcccccCCchhhc---CCCcccEEeccCCcCCC----cCCcCCCCCCCCCEEECcCCCCcc
Q 006145 261 SAIPAEVSSYYQLQRLDLSSNRFVGPFPQALL---SLPSITYLNIADNKLTG----KLFDDLSCNPELGFVDLSSNLLTG 333 (659)
Q Consensus 261 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~---~l~~L~~L~l~~N~l~~----~~p~~~~~~~~L~~L~ls~N~l~g 333 (659)
...+..+..+++|+.|++++|.+++..+..+. ..+.++.+++++|.+++ .+|+.+..+++|+.||+++|+++
T Consensus 212 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~- 290 (353)
T 2z80_A 212 LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK- 290 (353)
T ss_dssp THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-
T ss_pred cchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-
Confidence 54444455678888888888888875554433 35667778888887776 35666777888888888888888
Q ss_pred cCChhh-hCCCCCCEEEcCCccccC
Q 006145 334 QLPNCL-LAGSKNRVVLYARNCLAA 357 (659)
Q Consensus 334 ~ip~~~-~~~~~l~~l~~~~N~l~~ 357 (659)
.+|..+ ..+++++.+++++|.+.+
T Consensus 291 ~i~~~~~~~l~~L~~L~L~~N~~~~ 315 (353)
T 2z80_A 291 SVPDGIFDRLTSLQKIWLHTNPWDC 315 (353)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred ccCHHHHhcCCCCCEEEeeCCCccC
Confidence 566654 677888888888887764
No 59
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.96 E-value=1.5e-30 Score=271.59 Aligned_cols=181 Identities=35% Similarity=0.609 Sum_probs=156.0
Q ss_pred cCHHHHHHhhcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeecc
Q 006145 467 FSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECY 546 (659)
Q Consensus 467 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~ 546 (659)
+++.++..++++|+..+.||+|+||.||+|+.++|+.||||++........+++.+|++++++++||||++++++|.+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-- 106 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE-- 106 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCC--
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC--
Confidence 445566678899999999999999999999988899999999877655556789999999999999999999999875
Q ss_pred ccCCCCceeEEEEeccCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcce
Q 006145 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGH-AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVA 625 (659)
Q Consensus 547 ~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~ 625 (659)
.+..++||||+++|+|.+++.... ....++|..+..++.|+++||+|||+. +|+||||||+||++++++.+
T Consensus 107 -----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~ 178 (321)
T 2qkw_B 107 -----RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVP 178 (321)
T ss_dssp -----TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCE
T ss_pred -----CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCE
Confidence 456899999999999999997532 224699999999999999999999998 99999999999999999999
Q ss_pred EEccCccccccccc---cccceecccccccCCCCC
Q 006145 626 KISSYNLPLLAENA---EKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 626 kl~DFGla~~~~~~---~~~~~~~gt~~y~aPE~~ 657 (659)
||+|||+++..... .......||+.|+|||+.
T Consensus 179 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 213 (321)
T 2qkw_B 179 KITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYF 213 (321)
T ss_dssp EECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHH
T ss_pred EEeecccccccccccccccccccCCCccccCHHHh
Confidence 99999999764322 223445789999999964
No 60
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.96 E-value=5.5e-30 Score=267.45 Aligned_cols=178 Identities=20% Similarity=0.330 Sum_probs=155.4
Q ss_pred ccCHHHHHHhhcC----------CCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCC
Q 006145 466 TFSLEELEEATNN----------FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRH 534 (659)
Q Consensus 466 ~~~~~~l~~~~~~----------~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~n 534 (659)
.++.+++..+++. |+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|++++++++|||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 103 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence 4677888777764 556678999999999999976 69999999998766556678999999999999999
Q ss_pred ccceeeeeeeccccCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCC
Q 006145 535 LVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKI 614 (659)
Q Consensus 535 iv~l~g~~~~~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~ 614 (659)
|++++++|.. .+..++||||+++|+|.+++.. ..++|..+..++.|+++||+|||+. +|+||||||
T Consensus 104 iv~~~~~~~~-------~~~~~lv~e~~~~~~L~~~l~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp 169 (321)
T 2c30_A 104 VVEMYKSYLV-------GEELWVLMEFLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKS 169 (321)
T ss_dssp BCCEEEEEEE-------TTEEEEEECCCCSCBHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred cceEEEEEEE-------CCEEEEEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCH
Confidence 9999999986 4578999999999999999874 3699999999999999999999998 999999999
Q ss_pred CceeecCCcceEEccCccccccccc-cccceecccccccCCCCC
Q 006145 615 TDILLDQNLVAKISSYNLPLLAENA-EKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 615 ~NILld~~~~~kl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~ 657 (659)
+||+++.++.+||+|||+++..... .......||+.|+|||+.
T Consensus 170 ~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~ 213 (321)
T 2c30_A 170 DSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVI 213 (321)
T ss_dssp GGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHH
T ss_pred HHEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhh
Confidence 9999999999999999999766433 233567899999999975
No 61
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.96 E-value=4.2e-29 Score=268.01 Aligned_cols=265 Identities=17% Similarity=0.109 Sum_probs=222.3
Q ss_pred CCEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccC
Q 006145 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (659)
Q Consensus 74 ~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (659)
.+++.|++++|.+.+..+ ..+.++++|++|+|++|.+++..|..|+++++|++|+|++|.++...+..|.+
T Consensus 69 ~~L~~L~L~~n~i~~~~~---------~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~ 139 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDT---------YAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHN 139 (390)
T ss_dssp CCCSEEECTTSCCCEECT---------TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred ccCcEEECCCCcccccCh---------hhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcC
Confidence 368899999988764333 25678999999999999999999999999999999999999999554555799
Q ss_pred CCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEecccccccc----------------
Q 006145 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYG---------------- 217 (659)
Q Consensus 154 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~---------------- 217 (659)
+++|++|+|++|.+.+..|..+..+++|++|++++|.+++.. ++.+++|+.|++++|.+++
T Consensus 140 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~ 216 (390)
T 3o6n_A 140 TPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNS 216 (390)
T ss_dssp CTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSC
T ss_pred CCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeecccccccccCCCCcceEEECCCCe
Confidence 999999999999999888889999999999999999998653 4455566665555555543
Q ss_pred ---CCCCCCCCCcCCEEEcccCCCCCCCCC-CCcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcC
Q 006145 218 ---EVPDFSGLTYLQVLDLENNALGPQFPK-VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLS 293 (659)
Q Consensus 218 ---~~p~~~~l~~L~~L~L~~N~l~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 293 (659)
... ...++|+.|++++|.+++...- .+++|+.|++++|.+++..|..+..+++|+.|+|++|++++ +|..+..
T Consensus 217 l~~~~~--~~~~~L~~L~l~~n~l~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~ 293 (390)
T 3o6n_A 217 INVVRG--PVNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQP 293 (390)
T ss_dssp CCEEEC--CCCSSCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSC
T ss_pred eeeccc--cccccccEEECCCCCCcccHHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCC
Confidence 221 2246899999999999875211 25899999999999999999999999999999999999985 6777889
Q ss_pred CCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCccccC
Q 006145 294 LPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (659)
Q Consensus 294 l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~~ 357 (659)
+++|+.|++++|+++ .+|..+..+++|+.|++++|+++.. | +..+++++.+++++|.+.+
T Consensus 294 l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 294 IPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp CTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred CCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccc
Confidence 999999999999998 4666778889999999999999854 4 6677899999999998874
No 62
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=9.5e-29 Score=269.63 Aligned_cols=225 Identities=25% Similarity=0.232 Sum_probs=192.0
Q ss_pred CCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEc
Q 006145 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (659)
Q Consensus 107 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 186 (659)
++++.|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 57999999999999999999999999999999999999888899999999999999999999777778999999999999
Q ss_pred cCCcCCccCCcccCCCCCCcEEeccccccccCCCC--CCCCCcCCEEEcccCCCCCCCCCC--CcccceEecCCCcCCcc
Q 006145 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALGPQFPKV--GKKLVTMILSKNKFRSA 262 (659)
Q Consensus 187 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~ 262 (659)
++|.+++..+..|.++++|+.|+|++|+..+.++. |.++++|++|+|++|.++.. |.. +++|+.|+|++|++++.
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~ 222 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-PNLTPLIKLDELDLSGNHLSAI 222 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC-CCCTTCSSCCEEECTTSCCCEE
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc-cccCCCcccCEEECCCCccCcc
Confidence 99999988888999999999999999655444443 89999999999999998754 332 46778888888888777
Q ss_pred CchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCc
Q 006145 263 IPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT 332 (659)
Q Consensus 263 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~ 332 (659)
.|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+.
T Consensus 223 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 223 RPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred ChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 7777888888888888888887777777778888888888888887777777777778888888887765
No 63
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.96 E-value=1.1e-30 Score=283.16 Aligned_cols=178 Identities=15% Similarity=0.202 Sum_probs=152.9
Q ss_pred CHHHHHHhhcCCCCCceeccCcCceEEEEEecC-CcEEEEEEecccC---CCchHHHHHHHHHHhCCCCCCccceeeeee
Q 006145 468 SLEELEEATNNFDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCF 543 (659)
Q Consensus 468 ~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~-g~~vavK~l~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~ 543 (659)
.+.++....++|+..+.||+|+||+||+|+... ++.||||+++... ....+.+.+|++++..++|||||+++++|.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 455666678899999999999999999999764 8899999997532 222345899999999999999999999998
Q ss_pred eccccCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCc
Q 006145 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL 623 (659)
Q Consensus 544 ~~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~ 623 (659)
+ .+..|+|||||++|+|.++++.. ...+++..+..++.|++.||+|||+. +||||||||+|||+|.++
T Consensus 145 ~-------~~~~~lV~Ey~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g 212 (437)
T 4aw2_A 145 D-------DNNLYLVMDYYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNG 212 (437)
T ss_dssp C-------SSEEEEEECCCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTS
T ss_pred e-------CCEEEEEEecCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCC
Confidence 6 56799999999999999999852 24699999999999999999999998 999999999999999999
Q ss_pred ceEEccCccccccccccc--cceecccccccCCCCC
Q 006145 624 VAKISSYNLPLLAENAEK--VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 624 ~~kl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~ 657 (659)
.+||+|||+++....... ....+||+.|||||++
T Consensus 213 ~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l 248 (437)
T 4aw2_A 213 HIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEIL 248 (437)
T ss_dssp CEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHH
T ss_pred CEEEcchhhhhhcccCCCcccccccCCcCeeChHHH
Confidence 999999999976543322 2446899999999975
No 64
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.96 E-value=2.8e-30 Score=270.30 Aligned_cols=169 Identities=17% Similarity=0.281 Sum_probs=150.1
Q ss_pred hcCCCCCceeccCcCceEEEEEe-cCCcEEEEEEecccCCC--chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
.++|...+.||+|+||.||+|+. .+|+.||||++...... ..+++.+|+++++.++||||+++++++.+ .
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-------~ 86 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET-------E 86 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------S
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-------C
Confidence 45788899999999999999996 46999999999765432 23568999999999999999999999975 5
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
+..++||||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 87 ~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~ 160 (328)
T 3fe3_A 87 KTLYLIMEYASGGEVFDYLVAH---GRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGF 160 (328)
T ss_dssp SEEEEEECCCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTC
T ss_pred CEEEEEEECCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccC
Confidence 6789999999999999999752 4589999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccceecccccccCCCCC
Q 006145 633 PLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
++...........+||+.|+|||+.
T Consensus 161 a~~~~~~~~~~~~~gt~~y~aPE~~ 185 (328)
T 3fe3_A 161 SNEFTVGGKLDAFCGAPPYAAPELF 185 (328)
T ss_dssp CGGGSSSCGGGTTSSSGGGCCHHHH
T ss_pred ceecCCCCccccccCCcceeCcccc
Confidence 9877666666778999999999974
No 65
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.96 E-value=9.2e-29 Score=284.75 Aligned_cols=250 Identities=22% Similarity=0.209 Sum_probs=228.3
Q ss_pred CCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEc
Q 006145 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (659)
Q Consensus 107 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 186 (659)
++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 68999999999999988889999999999999999999999999999999999999999999766668999999999999
Q ss_pred cCCcCCccCCcccCCCCCCcEEeccccccccCCCC-CCCCCcCCEEEcccCCCCCCCCCC-----CcccceEecCCCcCC
Q 006145 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKV-----GKKLVTMILSKNKFR 260 (659)
Q Consensus 187 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~~-----~~~L~~L~l~~N~l~ 260 (659)
++|.+++..|..|+++++|++|+|++|.+++.+|. +.++++|++|++++|.+++..+.. .++|+.|++++|+++
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccc
Confidence 99999988888999999999999999999998776 889999999999999999877652 378999999999999
Q ss_pred ccCchhccCC---------------------------ccccEEeccCcccccCCchhhcCCCc--ccEEeccCCcCCCcC
Q 006145 261 SAIPAEVSSY---------------------------YQLQRLDLSSNRFVGPFPQALLSLPS--ITYLNIADNKLTGKL 311 (659)
Q Consensus 261 ~~~p~~~~~l---------------------------~~L~~L~Ls~N~l~~~~p~~l~~l~~--L~~L~l~~N~l~~~~ 311 (659)
+..|..+..+ ++|+.|++++|.+++..|.++..++. |+.|++++|++++..
T Consensus 185 ~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~ 264 (680)
T 1ziw_A 185 EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 264 (680)
T ss_dssp CBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEEC
T ss_pred ccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccC
Confidence 9888877654 45788888899999888989988865 999999999999998
Q ss_pred CcCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCcccc
Q 006145 312 FDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLA 356 (659)
Q Consensus 312 p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~ 356 (659)
|..+..+++|+.|++++|++++..|..+..+++++.+++++|...
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~ 309 (680)
T 1ziw_A 265 NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTK 309 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCC
T ss_pred cccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhh
Confidence 899999999999999999999999999999999999999887544
No 66
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.96 E-value=6e-30 Score=268.71 Aligned_cols=170 Identities=18% Similarity=0.304 Sum_probs=148.3
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEeccc---CCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMK---KCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 551 (659)
.++|...+.||+|+||+||+|+.. +|+.||||+++.. .....+.+.+|+++++.++||||+++++++.+
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~------- 76 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT------- 76 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC-------
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEe-------
Confidence 356888899999999999999975 5999999999754 23345678999999999999999999999976
Q ss_pred CceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCc
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 631 (659)
.+..|+||||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 77 ~~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG 150 (337)
T 1o6l_A 77 HDRLCFVMEYANGGELFFHLSRE---RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFG 150 (337)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeecc
Confidence 56789999999999999999752 4689999999999999999999998 99999999999999999999999999
Q ss_pred ccccc-ccccccceecccccccCCCCCC
Q 006145 632 LPLLA-ENAEKVGHVIPYSGSIDPTNSA 658 (659)
Q Consensus 632 la~~~-~~~~~~~~~~gt~~y~aPE~~~ 658 (659)
+++.. .........+||+.|||||+..
T Consensus 151 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~ 178 (337)
T 1o6l_A 151 LCKEGISDGATMKTFCGTPEYLAPEVLE 178 (337)
T ss_dssp TCBCSCCTTCCBCCCEECGGGCCGGGGS
T ss_pred chhhcccCCCcccccccChhhCChhhhc
Confidence 99764 2333456678999999999863
No 67
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.96 E-value=5.4e-30 Score=265.92 Aligned_cols=169 Identities=21% Similarity=0.393 Sum_probs=145.9
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCcee
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~ 555 (659)
++|...+.||+|+||+||+|+.. +++.||+|++........+.|.+|++++++++||||+++++++.+ .+..
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~~~ 82 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK-------DKRL 82 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-------TTEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEec-------CCee
Confidence 45777899999999999999975 599999999866544455789999999999999999999999986 4678
Q ss_pred EEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCccccc
Q 006145 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (659)
Q Consensus 556 ~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~ 635 (659)
++||||+++|+|.++++.. ...++|.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 83 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 157 (310)
T 3s95_A 83 NFITEYIKGGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARL 157 (310)
T ss_dssp EEEEECCTTCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEE
T ss_pred EEEEEecCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeeccccee
Confidence 9999999999999999853 34699999999999999999999998 999999999999999999999999999976
Q ss_pred ccccccc---------------ceecccccccCCCCC
Q 006145 636 AENAEKV---------------GHVIPYSGSIDPTNS 657 (659)
Q Consensus 636 ~~~~~~~---------------~~~~gt~~y~aPE~~ 657 (659)
....... ...+||+.|+|||+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 194 (310)
T 3s95_A 158 MVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMI 194 (310)
T ss_dssp CC--------------------CCCCSCGGGCCHHHH
T ss_pred cccccccccccccccccccccccccCCCcceeCHHHh
Confidence 6432221 146799999999975
No 68
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.96 E-value=9.8e-30 Score=262.52 Aligned_cols=168 Identities=17% Similarity=0.325 Sum_probs=149.4
Q ss_pred hcCCCCCceeccCcCceEEEEEe-cCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCce
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 554 (659)
.++|...+.||+|+||+||+|+. .+|+.||||++........+.+.+|+.++++++||||+++++++.. .+.
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~~ 91 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-------GDE 91 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------TTE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEE-------CCE
Confidence 46788999999999999999995 4699999999987666666789999999999999999999999986 467
Q ss_pred eEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcccc
Q 006145 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (659)
Q Consensus 555 ~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~ 634 (659)
.++||||+++|+|.+++.+ ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 92 ~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~ 164 (297)
T 3fxz_A 92 LWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA 164 (297)
T ss_dssp EEEEEECCTTCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEECCCCCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCce
Confidence 8999999999999999985 3589999999999999999999998 99999999999999999999999999997
Q ss_pred cccccc-ccceecccccccCCCCC
Q 006145 635 LAENAE-KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 635 ~~~~~~-~~~~~~gt~~y~aPE~~ 657 (659)
...... .....+||+.|+|||+.
T Consensus 165 ~~~~~~~~~~~~~gt~~y~aPE~~ 188 (297)
T 3fxz_A 165 QITPEQSKRSTMVGTPYWMAPEVV 188 (297)
T ss_dssp ECCSTTCCBCCCCSCGGGCCHHHH
T ss_pred ecCCcccccCCccCCcCccChhhh
Confidence 664332 34557899999999974
No 69
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.96 E-value=7.7e-30 Score=272.14 Aligned_cols=169 Identities=15% Similarity=0.301 Sum_probs=150.7
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccC---CCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
++|...+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++|||||++++++.+ .
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~-------~ 87 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD-------E 87 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------S
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-------C
Confidence 56788899999999999999965 58999999996532 3345679999999999999999999999976 5
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
+..|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 88 ~~~~lv~e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~ 161 (384)
T 4fr4_A 88 EDMFMVVDLLLGGDLRYHLQQ---NVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNI 161 (384)
T ss_dssp SEEEEEECCCTTEEHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccce
Confidence 678999999999999999986 24699999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccceecccccccCCCCCC
Q 006145 633 PLLAENAEKVGHVIPYSGSIDPTNSA 658 (659)
Q Consensus 633 a~~~~~~~~~~~~~gt~~y~aPE~~~ 658 (659)
++...........+||+.|||||++.
T Consensus 162 a~~~~~~~~~~~~~gt~~Y~aPE~~~ 187 (384)
T 4fr4_A 162 AAMLPRETQITTMAGTKPYMAPEMFS 187 (384)
T ss_dssp CEECCTTCCBCCCCSCGGGCCGGGTC
T ss_pred eeeccCCCceeccCCCccccCCeeec
Confidence 98876666667789999999999863
No 70
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.96 E-value=2.1e-30 Score=278.96 Aligned_cols=175 Identities=15% Similarity=0.257 Sum_probs=151.5
Q ss_pred HHHHHHhhcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccC---CCchHHHHHHHHHHhCCCCCCccceeeeeee
Q 006145 469 LEELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFE 544 (659)
Q Consensus 469 ~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~ 544 (659)
+.++....++|...+.||+|+||+||+|+.. +++.||+|+++... ....+.+.+|+++++.++|||||+++++|.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 4455566788999999999999999999976 58999999996532 2234568899999999999999999999976
Q ss_pred ccccCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcc
Q 006145 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV 624 (659)
Q Consensus 545 ~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~ 624 (659)
.+..|+||||+++|+|.++++. ..+++..+..++.|++.||+|||+. +|+||||||+|||+|.++.
T Consensus 141 -------~~~~~lV~E~~~gg~L~~~l~~----~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ 206 (410)
T 3v8s_A 141 -------DRYLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGH 206 (410)
T ss_dssp -------SSEEEEEECCCTTEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSC
T ss_pred -------CCEEEEEEeCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCC
Confidence 5678999999999999999975 3589999999999999999999998 9999999999999999999
Q ss_pred eEEccCcccccccccc--ccceecccccccCCCCC
Q 006145 625 AKISSYNLPLLAENAE--KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 625 ~kl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~ 657 (659)
+||+|||+++...... .....+||+.|||||++
T Consensus 207 ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l 241 (410)
T 3v8s_A 207 LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVL 241 (410)
T ss_dssp EEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHH
T ss_pred EEEeccceeEeeccCCcccccCCcCCccccCHHHh
Confidence 9999999998765433 23467899999999975
No 71
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.96 E-value=1.3e-29 Score=265.16 Aligned_cols=179 Identities=17% Similarity=0.346 Sum_probs=146.2
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC-chHHHHHHHHHHhCCCCCCccceeeeeeecccc-----
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFD----- 548 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~----- 548 (659)
.++|+..+.||+|+||.||+|+.. +|+.||||+++..... ..+.+.+|++++++++|||||+++++|.+....
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 456888899999999999999976 6999999999755433 346799999999999999999999998653210
Q ss_pred ---------------------------------------------CCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHH
Q 006145 549 ---------------------------------------------DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWT 583 (659)
Q Consensus 549 ---------------------------------------------~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~ 583 (659)
.......++||||+++|+|.+++.........++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 00122479999999999999999875444567888
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcccccccccc-------------ccceeccccc
Q 006145 584 QRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE-------------KVGHVIPYSG 650 (659)
Q Consensus 584 ~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~-------------~~~~~~gt~~ 650 (659)
.+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...... .....+||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 8999999999999999998 99999999999999999999999999997765432 2244679999
Q ss_pred ccCCCCC
Q 006145 651 SIDPTNS 657 (659)
Q Consensus 651 y~aPE~~ 657 (659)
|+|||+.
T Consensus 242 y~aPE~~ 248 (332)
T 3qd2_B 242 YMSPEQI 248 (332)
T ss_dssp GSCHHHH
T ss_pred ccChHHh
Confidence 9999974
No 72
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=3.8e-31 Score=275.11 Aligned_cols=223 Identities=26% Similarity=0.271 Sum_probs=108.8
Q ss_pred CCEEEecCCCC-cCCCCcccC-------CCCCCcEEEcccCcCcccCChhc--cCCCCCcEEEeecCCCCCCCccccCCC
Q 006145 109 LKVLRLVSLGL-WGPLSGKIS-------RLSSLEILNMSSNFLNGAIPQEL--SILTSLQTLILDENMLAGRVPDWLGSL 178 (659)
Q Consensus 109 L~~L~L~~n~l-~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p~~l~~l 178 (659)
|+.|+|++|.+ .+.+|..+. ++++|++|+|++|.+++.+|..+ ..+++|++|+|++|++++. |..++.+
T Consensus 65 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l 143 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAEL 143 (312)
T ss_dssp HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHH
T ss_pred HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHH
Confidence 44444555544 233444333 45555555555555555555443 4555555555555555544 4444443
Q ss_pred -----CCCCEEEccCCcCCccCCcccCCCCCCcEEeccccccccC---CCCC--CCCCcCCEEEcccCCCCCCCCCCCcc
Q 006145 179 -----PILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGE---VPDF--SGLTYLQVLDLENNALGPQFPKVGKK 248 (659)
Q Consensus 179 -----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~--~~l~~L~~L~L~~N~l~~~~~~~~~~ 248 (659)
++|++|+|++|++++..|..|+++++|++|+|++|++.+. ++.+ ..+++|++|+|++|.+++..
T Consensus 144 ~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~------ 217 (312)
T 1wwl_A 144 QQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPS------ 217 (312)
T ss_dssp HTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHH------
T ss_pred HHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchH------
Confidence 4555555555555544445555555555555555554443 1112 44455555555555443210
Q ss_pred cceEecCCCcCCccCc-hhccCCccccEEeccCcccccCCc-hhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEEC
Q 006145 249 LVTMILSKNKFRSAIP-AEVSSYYQLQRLDLSSNRFVGPFP-QALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDL 326 (659)
Q Consensus 249 L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l 326 (659)
.++ ..+..+++|+.|+|++|++++..| ..+..+++|++|+|++|+++ .+|..+. ++|+.||+
T Consensus 218 -------------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~L 281 (312)
T 1wwl_A 218 -------------GVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDL 281 (312)
T ss_dssp -------------HHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEEC
T ss_pred -------------HHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEEC
Confidence 111 223345555555555555555443 33444555555555555555 4444443 55555555
Q ss_pred cCCCCcccCChhhhCCCCCCEEEcCCcccc
Q 006145 327 SSNLLTGQLPNCLLAGSKNRVVLYARNCLA 356 (659)
Q Consensus 327 s~N~l~g~ip~~~~~~~~l~~l~~~~N~l~ 356 (659)
++|++++. |. +..+++++.+++++|.++
T Consensus 282 s~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 282 SYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp CSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred CCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 55555543 43 445555555555555554
No 73
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.96 E-value=1.9e-29 Score=267.26 Aligned_cols=169 Identities=18% Similarity=0.293 Sum_probs=149.2
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC------chHHHHHHHHHHhCCCCCCccceeeeeeecccc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH------STRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 548 (659)
.+.|...+.||+|+||.||+|+.. +|+.||||.++..... ..+++.+|++++++++||||+++++++.+
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~---- 86 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN---- 86 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC----
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe----
Confidence 456888899999999999999976 5999999999765322 24679999999999999999999999975
Q ss_pred CCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCc----c
Q 006145 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL----V 624 (659)
Q Consensus 549 ~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~----~ 624 (659)
....++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+||++++++ .
T Consensus 87 ---~~~~~lv~e~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~ 157 (361)
T 2yab_A 87 ---RTDVVLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPH 157 (361)
T ss_dssp ---SSEEEEEEECCCSCBHHHHHTT---CSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCC
T ss_pred ---CCEEEEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccC
Confidence 5678999999999999999975 24699999999999999999999998 999999999999998776 7
Q ss_pred eEEccCccccccccccccceecccccccCCCCC
Q 006145 625 AKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 625 ~kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
+||+|||+++...........+||+.|+|||+.
T Consensus 158 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~ 190 (361)
T 2yab_A 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190 (361)
T ss_dssp EEECCCSSCEECCTTCCCCCCCSCGGGCCHHHH
T ss_pred EEEEecCCceEcCCCCccccCCCCccEECchHH
Confidence 999999999887666566678899999999975
No 74
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.96 E-value=3.6e-30 Score=277.30 Aligned_cols=179 Identities=15% Similarity=0.196 Sum_probs=153.1
Q ss_pred cCHHHHHHhhcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCC---CchHHHHHHHHHHhCCCCCCccceeeee
Q 006145 467 FSLEELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHC 542 (659)
Q Consensus 467 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~ 542 (659)
+.+++.....++|...+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|++++..++||||+++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 345566667789999999999999999999975 699999999965321 2234588999999999999999999999
Q ss_pred eeccccCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCC
Q 006145 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN 622 (659)
Q Consensus 543 ~~~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~ 622 (659)
.+ .+..|+||||+++|+|.+++++. ...+++..+..++.||+.||+|||+. +||||||||+|||+|.+
T Consensus 131 ~~-------~~~~~lVmE~~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~ 198 (412)
T 2vd5_A 131 QD-------ENYLYLVMEYYVGGDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRC 198 (412)
T ss_dssp EC-------SSEEEEEECCCCSCBHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTT
T ss_pred ee-------CCEEEEEEcCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCC
Confidence 76 56789999999999999999752 23689999999999999999999998 99999999999999999
Q ss_pred cceEEccCccccccccccc--cceecccccccCCCCC
Q 006145 623 LVAKISSYNLPLLAENAEK--VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 623 ~~~kl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~ 657 (659)
+.+||+|||+++....... ....+||+.|||||++
T Consensus 199 g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l 235 (412)
T 2vd5_A 199 GHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEIL 235 (412)
T ss_dssp SCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHH
T ss_pred CCEEEeechhheeccCCCccccceeccccCcCCHHHH
Confidence 9999999999977644332 2346899999999975
No 75
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=9.1e-29 Score=253.58 Aligned_cols=230 Identities=23% Similarity=0.235 Sum_probs=172.5
Q ss_pred ceEeCCCCEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccC
Q 006145 68 TVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAI 147 (659)
Q Consensus 68 gv~C~~~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 147 (659)
++.|.....+.++.+++.+.. +|. .+ .++|++|+|++|.+++..+..|..+++|++|+|++|.+++..
T Consensus 5 ~C~C~~~~~~~~~c~~~~l~~-ip~---------~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 72 (285)
T 1ozn_A 5 ACVCYNEPKVTTSCPQQGLQA-VPV---------GI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARID 72 (285)
T ss_dssp TCEEECSSSCEEECCSSCCSS-CCT---------TC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CceECCCCCeEEEcCcCCccc-CCc---------CC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeC
Confidence 366755444667777766542 222 11 358999999999999988888999999999999999999888
Q ss_pred ChhccCCCCCcEEEeecCC-CCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEeccccccccCCCC-CCCC
Q 006145 148 PQELSILTSLQTLILDENM-LAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGL 225 (659)
Q Consensus 148 p~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l 225 (659)
|..|.++++|++|+|++|. +....|..+..+++|++|++++|.+++..|..|.++++|++|++++|++++.++. |..+
T Consensus 73 ~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 152 (285)
T 1ozn_A 73 AAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDL 152 (285)
T ss_dssp TTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred HhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccC
Confidence 9999999999999999997 7766688899999999999999999988888899999999999999999987766 8888
Q ss_pred CcCCEEEcccCCCCCCCCCC---CcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEec
Q 006145 226 TYLQVLDLENNALGPQFPKV---GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNI 302 (659)
Q Consensus 226 ~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l 302 (659)
++|++|+|++|.+++..+.. +++|+.|++++|.+++..|..+..+++|+.|++++|++++..+..+..+++|+.|++
T Consensus 153 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 232 (285)
T 1ozn_A 153 GNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRL 232 (285)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEec
Confidence 99999988888876544432 345555555555555555555555555555555555555544445555555555555
Q ss_pred cCCcCCC
Q 006145 303 ADNKLTG 309 (659)
Q Consensus 303 ~~N~l~~ 309 (659)
++|.++.
T Consensus 233 ~~N~~~c 239 (285)
T 1ozn_A 233 NDNPWVC 239 (285)
T ss_dssp CSSCEEC
T ss_pred cCCCccC
Confidence 5555543
No 76
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.96 E-value=8e-30 Score=272.94 Aligned_cols=170 Identities=21% Similarity=0.309 Sum_probs=147.0
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC---chHHHHHHHHHHhCC-CCCCccceeeeeeeccccCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---STRNFMHHIELISKL-RHRHLVSALGHCFECYFDDS 550 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~ 550 (659)
.++|+..+.||+|+||+||+|+.. +++.||||+++..... ..+.+.+|..++.++ +|||||++++++.+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~------ 124 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT------ 124 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEEC------
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEE------
Confidence 456888899999999999999976 5889999999765322 234688999999887 89999999999876
Q ss_pred CCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccC
Q 006145 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (659)
Q Consensus 551 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 630 (659)
.+..|+||||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+|||+|.++.+||+||
T Consensus 125 -~~~~~lV~E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DF 197 (396)
T 4dc2_A 125 -ESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDY 197 (396)
T ss_dssp -SSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred -CCEEEEEEEcCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeec
Confidence 56799999999999999999852 4699999999999999999999998 9999999999999999999999999
Q ss_pred cccccc-ccccccceecccccccCCCCCC
Q 006145 631 NLPLLA-ENAEKVGHVIPYSGSIDPTNSA 658 (659)
Q Consensus 631 Gla~~~-~~~~~~~~~~gt~~y~aPE~~~ 658 (659)
|+++.. .........+||+.|||||++.
T Consensus 198 Gla~~~~~~~~~~~~~~gt~~Y~aPE~l~ 226 (396)
T 4dc2_A 198 GMCKEGLRPGDTTSTFCGTPNYIAPEILR 226 (396)
T ss_dssp TTCBCCCCTTCCBCCCCBCGGGCCHHHHT
T ss_pred ceeeecccCCCccccccCCcccCCchhhc
Confidence 999863 3344456789999999999753
No 77
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.96 E-value=4e-29 Score=258.89 Aligned_cols=182 Identities=32% Similarity=0.535 Sum_probs=157.3
Q ss_pred cccCHHHHHHhhcCCCCC------ceeccCcCceEEEEEecCCcEEEEEEecccC----CCchHHHHHHHHHHhCCCCCC
Q 006145 465 RTFSLEELEEATNNFDTS------AFMGEGSQGQMYRGRLKNGTFVAIRCLKMKK----CHSTRNFMHHIELISKLRHRH 534 (659)
Q Consensus 465 ~~~~~~~l~~~~~~~~~~------~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~----~~~~~~~~~Ei~~l~~l~H~n 534 (659)
..|+++++..++++|+.. +.||+|+||.||+|+. +++.||||++.... ....+.|.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 468999999999999988 8999999999999987 58899999996532 122467999999999999999
Q ss_pred ccceeeeeeeccccCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCC
Q 006145 535 LVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKI 614 (659)
Q Consensus 535 iv~l~g~~~~~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~ 614 (659)
|+++++++.+ .+..++||||+++|+|.+++........++|..+..++.|+++||+|||+. +|+||||||
T Consensus 92 i~~~~~~~~~-------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp 161 (307)
T 2nru_A 92 LVELLGFSSD-------GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKS 161 (307)
T ss_dssp BCCEEEEECS-------SSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCG
T ss_pred eEEEEEEEec-------CCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCH
Confidence 9999999975 456899999999999999997533345799999999999999999999998 999999999
Q ss_pred CceeecCCcceEEccCcccccccccc---ccceecccccccCCCCC
Q 006145 615 TDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 615 ~NILld~~~~~kl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~ 657 (659)
+||++++++.+||+|||+++...... ......||+.|+|||+.
T Consensus 162 ~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~ 207 (307)
T 2nru_A 162 ANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEAL 207 (307)
T ss_dssp GGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHH
T ss_pred HHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHh
Confidence 99999999999999999997654322 22446799999999964
No 78
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.96 E-value=1.1e-29 Score=268.51 Aligned_cols=169 Identities=22% Similarity=0.340 Sum_probs=141.7
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccC---CCchHHHHHHHHHHhCC-CCCCccceeeeeeeccccCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDS 550 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~ 550 (659)
.++|...+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|+++++.+ +||||+++++++.+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~------ 95 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQT------ 95 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEEC------
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEe------
Confidence 467888999999999999999965 59999999997542 23346688999999988 69999999999976
Q ss_pred CCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccC
Q 006145 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (659)
Q Consensus 551 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 630 (659)
.+..|+||||+++|+|.++++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 96 -~~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DF 168 (353)
T 3txo_A 96 -PDRLFFVMEFVNGGDLMFHIQKS---RRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADF 168 (353)
T ss_dssp -SSEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred -CCEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccc
Confidence 56789999999999999999752 4699999999999999999999998 9999999999999999999999999
Q ss_pred ccccccc-cccccceecccccccCCCCC
Q 006145 631 NLPLLAE-NAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~-~~~~~~~~~gt~~y~aPE~~ 657 (659)
|+++... ........+||+.|||||++
T Consensus 169 G~a~~~~~~~~~~~~~~gt~~y~aPE~~ 196 (353)
T 3txo_A 169 GMCKEGICNGVTTATFCGTPDYIAPEIL 196 (353)
T ss_dssp TTCBCSCC---------CCGGGCCHHHH
T ss_pred cceeecccCCccccccCCCcCeEChhhc
Confidence 9998643 33344567899999999964
No 79
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=1.5e-28 Score=254.70 Aligned_cols=242 Identities=24% Similarity=0.202 Sum_probs=212.6
Q ss_pred EEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCC--CCccccCCCCCCCEEEccCC
Q 006145 112 LRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAG--RVPDWLGSLPILAVLSLRNN 189 (659)
Q Consensus 112 L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~L~~N 189 (659)
++.++++++. +|..+. ++|++|+|++|.++...+..|.++++|++|+|++|.++. ..|..+..+++|++|+|++|
T Consensus 12 l~c~~~~l~~-ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n 88 (306)
T 2z66_A 12 IRCNSKGLTS-VPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFN 88 (306)
T ss_dssp EECCSSCCSS-CCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSC
T ss_pred EEcCCCCccc-CCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCC
Confidence 4444444433 343332 689999999999995555568999999999999999983 34677788999999999999
Q ss_pred cCCccCCcccCCCCCCcEEeccccccccCCC--CCCCCCcCCEEEcccCCCCCCCCCC---CcccceEecCCCcCCc-cC
Q 006145 190 MFNGTLPDSFSYLENLRVLALSNNHFYGEVP--DFSGLTYLQVLDLENNALGPQFPKV---GKKLVTMILSKNKFRS-AI 263 (659)
Q Consensus 190 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~-~~ 263 (659)
.++ .+|..+..+++|++|++++|++++..+ .+..+++|++|++++|.+.+..+.. +++|++|++++|.+++ .+
T Consensus 89 ~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 167 (306)
T 2z66_A 89 GVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFL 167 (306)
T ss_dssp SEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEE
T ss_pred ccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccc
Confidence 998 577789999999999999999998775 5899999999999999998877764 5789999999999987 68
Q ss_pred chhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCC
Q 006145 264 PAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGS 343 (659)
Q Consensus 264 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~ 343 (659)
|..+..+++|+.|+|++|++++..|..+..+++|+.|++++|++++..+..+..+++|+.||+++|++++..|..+..++
T Consensus 168 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 247 (306)
T 2z66_A 168 PDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFP 247 (306)
T ss_dssp CSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCC
T ss_pred hhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhh
Confidence 88999999999999999999998899999999999999999999988888899999999999999999999999998884
Q ss_pred -CCCEEEcCCccccC
Q 006145 344 -KNRVVLYARNCLAA 357 (659)
Q Consensus 344 -~l~~l~~~~N~l~~ 357 (659)
+++.+++++|.+++
T Consensus 248 ~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 248 SSLAFLNLTQNDFAC 262 (306)
T ss_dssp TTCCEEECTTCCEEC
T ss_pred ccCCEEEccCCCeec
Confidence 89999999999875
No 80
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.96 E-value=1.9e-29 Score=265.80 Aligned_cols=169 Identities=18% Similarity=0.290 Sum_probs=140.7
Q ss_pred hcCCCCCceeccCcCceEEEEEe-cCCcEEEEEEecccCC-CchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
.++|...+.||+|+||+||+|+. .+|+.||||++..... ...+.+.+|++++++++||||+++++++.+ .+
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~-------~~ 81 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLET-------AN 81 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEEC-------SS
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEe-------CC
Confidence 56788899999999999999996 4699999999976542 234578999999999999999999999976 56
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCccc
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla 633 (659)
..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 82 ~~~lv~E~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a 155 (347)
T 3zgw_A 82 KIFMVLEYCPGGELFDYIISQ---DRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLC 155 (347)
T ss_dssp EEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCc
Confidence 789999999999999999752 4599999999999999999999998 9999999999999999999999999999
Q ss_pred cccccc--cccceecccccccCCCCC
Q 006145 634 LLAENA--EKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 634 ~~~~~~--~~~~~~~gt~~y~aPE~~ 657 (659)
...... ......+||+.|+|||+.
T Consensus 156 ~~~~~~~~~~~~~~~gt~~y~aPE~~ 181 (347)
T 3zgw_A 156 AKPKGNKDYHLQTCCGSLAYAAPELI 181 (347)
T ss_dssp BC--------------CGGGCCHHHH
T ss_pred ccccCCCCccccccCCccCccCHHHH
Confidence 765432 234567899999999975
No 81
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.96 E-value=4.6e-29 Score=257.40 Aligned_cols=171 Identities=18% Similarity=0.297 Sum_probs=142.8
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC--------------------------chHHHHHHHHHHh
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--------------------------STRNFMHHIELIS 528 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--------------------------~~~~~~~Ei~~l~ 528 (659)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ..+++.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 457888899999999999999965 5899999999654311 1256899999999
Q ss_pred CCCCCCccceeeeeeeccccCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCcc
Q 006145 529 KLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVF 608 (659)
Q Consensus 529 ~l~H~niv~l~g~~~~~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ii 608 (659)
+++||||+++++++.+. ..+..++||||+++|+|.+++.. ..+++..+..++.|+++||+|||+. +|+
T Consensus 92 ~l~h~~iv~~~~~~~~~-----~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~iv 159 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDP-----NEDHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQDLIKGIEYLHYQ---KII 159 (298)
T ss_dssp TCCCTTBCCEEEEEECS-----SSSEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred hCCCCCCCeEEEEEEcC-----CCCEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHC---Cee
Confidence 99999999999998752 24578999999999999987653 4699999999999999999999998 999
Q ss_pred ccCCCCCceeecCCcceEEccCccccccccc-cccceecccccccCCCCCC
Q 006145 609 SNNLKITDILLDQNLVAKISSYNLPLLAENA-EKVGHVIPYSGSIDPTNSA 658 (659)
Q Consensus 609 HrDlk~~NILld~~~~~kl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~ 658 (659)
||||||+||+++.++.+||+|||+++..... .......||+.|+|||+..
T Consensus 160 H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 210 (298)
T 2zv2_A 160 HRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLS 210 (298)
T ss_dssp CCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCC
T ss_pred ccCCCHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhc
Confidence 9999999999999999999999999766433 2335578999999999863
No 82
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=3.2e-29 Score=261.60 Aligned_cols=169 Identities=15% Similarity=0.211 Sum_probs=149.3
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCce
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 554 (659)
.++|...+.||+|+||.||+|+.. +++.||+|.++... ...+.+.+|+++++.++||||+++++++.+ .+.
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-------~~~ 75 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFES-------MEE 75 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEE-------TTE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEec-------CCE
Confidence 457888899999999999999976 58999999997443 234568999999999999999999999976 567
Q ss_pred eEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecC--CcceEEccCcc
Q 006145 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ--NLVAKISSYNL 632 (659)
Q Consensus 555 ~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~--~~~~kl~DFGl 632 (659)
.++||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~ 150 (321)
T 1tki_A 76 LVMIFEFISGLDIFERINTS--AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQ 150 (321)
T ss_dssp EEEEECCCCCCBHHHHHTSS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTT
T ss_pred EEEEEEeCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCC
Confidence 89999999999999999753 24689999999999999999999998 9999999999999997 78999999999
Q ss_pred ccccccccccceecccccccCCCCC
Q 006145 633 PLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
++............||+.|+|||+.
T Consensus 151 a~~~~~~~~~~~~~gt~~y~aPE~~ 175 (321)
T 1tki_A 151 ARQLKPGDNFRLLFTAPEYYAPEVH 175 (321)
T ss_dssp CEECCTTCEEEEEESCGGGSCHHHH
T ss_pred CeECCCCCccccccCChhhcCcHHh
Confidence 9887666666778899999999975
No 83
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=6.7e-28 Score=263.83 Aligned_cols=226 Identities=20% Similarity=0.169 Sum_probs=207.0
Q ss_pred CCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEec
Q 006145 131 SSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLAL 210 (659)
Q Consensus 131 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 210 (659)
++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 68999999999999999999999999999999999999988899999999999999999999887788999999999999
Q ss_pred cccccccCCCC-CCCCCcCCEEEcccCCCCCCCCC----CCcccceEecCCCcCCccCchhccCCccccEEeccCccccc
Q 006145 211 SNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPK----VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVG 285 (659)
Q Consensus 211 s~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~----~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 285 (659)
++|+++..++. |.++++|++|+|++|+..+.++. .+++|+.|+|++|++++. | .+..+++|+.|+|++|+|++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~ 232 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPE 232 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcc
Confidence 99999987764 99999999999999554444433 257999999999999874 4 58899999999999999999
Q ss_pred CCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCccccCC
Q 006145 286 PFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAG 358 (659)
Q Consensus 286 ~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~~~ 358 (659)
..|..|..+++|+.|+|++|++++..+..+..+++|+.|||++|++++..+..+..+++++.+++++|.+.+.
T Consensus 233 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 233 IRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCD 305 (452)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECS
T ss_pred cCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCC
Confidence 9999999999999999999999999999999999999999999999977777888899999999999988753
No 84
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=2.7e-30 Score=268.68 Aligned_cols=227 Identities=21% Similarity=0.200 Sum_probs=175.8
Q ss_pred ccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcC-cccCChhcc-------CCCCCcEEEeecCCCCCCCccc
Q 006145 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFL-NGAIPQELS-------ILTSLQTLILDENMLAGRVPDW 174 (659)
Q Consensus 103 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~ 174 (659)
+...++|+.|++++|.+ .+|..+... |+.|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 34556677778888887 667666554 88888888888 456676665 6788888888888888777776
Q ss_pred c--CCCCCCCEEEccCCcCCccCCcccCCC-----CCCcEEeccccccccCCCC-CCCCCcCCEEEcccCCCCCCCCCCC
Q 006145 175 L--GSLPILAVLSLRNNMFNGTLPDSFSYL-----ENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVG 246 (659)
Q Consensus 175 l--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~~~ 246 (659)
+ ..+++|++|+|++|++++. |..++.+ ++|++|+|++|++++.+|. |..+++|++|+|++|.+
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l-------- 185 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPE-------- 185 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTT--------
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCc--------
Confidence 5 7788888888888888866 7766666 7788888888888776653 77777777777766654
Q ss_pred cccceEecCCCcCCcc--Cchhc--cCCccccEEeccCccccc--CCc-hhhcCCCcccEEeccCCcCCCcCC-cCCCCC
Q 006145 247 KKLVTMILSKNKFRSA--IPAEV--SSYYQLQRLDLSSNRFVG--PFP-QALLSLPSITYLNIADNKLTGKLF-DDLSCN 318 (659)
Q Consensus 247 ~~L~~L~l~~N~l~~~--~p~~~--~~l~~L~~L~Ls~N~l~~--~~p-~~l~~l~~L~~L~l~~N~l~~~~p-~~~~~~ 318 (659)
.+. +|..+ ..+++|++|+|++|+|++ .++ ..+..+++|+.|++++|++++.+| ..+..+
T Consensus 186 -------------~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l 252 (312)
T 1wwl_A 186 -------------LGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWP 252 (312)
T ss_dssp -------------CHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCC
T ss_pred -------------CcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhc
Confidence 333 23344 789999999999999983 223 445688999999999999999875 456678
Q ss_pred CCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCccccCC
Q 006145 319 PELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAG 358 (659)
Q Consensus 319 ~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~~~ 358 (659)
++|+.|++++|+++ .+|..+. ++++.+++++|.+++.
T Consensus 253 ~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 253 SQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN 289 (312)
T ss_dssp TTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC
T ss_pred CCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC
Confidence 99999999999999 8898876 7899999999999865
No 85
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.96 E-value=6.6e-30 Score=265.33 Aligned_cols=176 Identities=23% Similarity=0.422 Sum_probs=139.3
Q ss_pred HHHHhhcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCCc--hHHHHHHHHHHhCCCCCCccceeeeeeecccc
Q 006145 471 ELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (659)
Q Consensus 471 ~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~--~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 548 (659)
++.....+|...+.||+|+||+||+|+. +|+.||||++....... .++|.+|++++++++||||+++++++.+
T Consensus 31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---- 105 (309)
T 3p86_A 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ---- 105 (309)
T ss_dssp -CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred cccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE----
Confidence 3334466788899999999999999987 58899999997654322 3579999999999999999999999975
Q ss_pred CCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCC--ccccCCCCCceeecCCcceE
Q 006145 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPG--VFSNNLKITDILLDQNLVAK 626 (659)
Q Consensus 549 ~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--iiHrDlk~~NILld~~~~~k 626 (659)
.+..++||||+++|+|.++++.......+++..+..++.|+++||+|||+. + |+||||||+||++++++.+|
T Consensus 106 ---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~k 179 (309)
T 3p86_A 106 ---PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVK 179 (309)
T ss_dssp ---TTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEE
T ss_pred ---CCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEE
Confidence 456899999999999999998632223489999999999999999999997 6 99999999999999999999
Q ss_pred EccCcccccccccc-ccceecccccccCCCCC
Q 006145 627 ISSYNLPLLAENAE-KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 627 l~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~ 657 (659)
|+|||+++...... ......||+.|+|||+.
T Consensus 180 L~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~ 211 (309)
T 3p86_A 180 VCDFGLSRLKASTFLSSKSAAGTPEWMAPEVL 211 (309)
T ss_dssp ECCCC-----------------CCTTSCHHHH
T ss_pred ECCCCCCccccccccccccCCCCccccChhhh
Confidence 99999997654332 23557899999999975
No 86
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.96 E-value=8.5e-28 Score=273.70 Aligned_cols=254 Identities=23% Similarity=0.179 Sum_probs=213.4
Q ss_pred CCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEc
Q 006145 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (659)
Q Consensus 107 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 186 (659)
+++++|+|++|+|++..+..|.++++|++|||++|+|++..|.+|.++++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 37899999999999999999999999999999999999888889999999999999999999887889999999999999
Q ss_pred cCCcCCccCCcccCCCCCCcEEeccccccccC-CCC-CCCCCcCCEEEcccCCCCCCCCCC-------------------
Q 006145 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGE-VPD-FSGLTYLQVLDLENNALGPQFPKV------------------- 245 (659)
Q Consensus 187 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~-~~~l~~L~~L~L~~N~l~~~~~~~------------------- 245 (659)
++|++++..+..|+++++|++|+|++|.+++. +|. +..+++|++|+|++|++++..+..
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccC
Confidence 99999988778899999999999999999864 444 788999999999999774321100
Q ss_pred --------------------------------------------------------------------------------
Q 006145 246 -------------------------------------------------------------------------------- 245 (659)
Q Consensus 246 -------------------------------------------------------------------------------- 245 (659)
T Consensus 212 ~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~ 291 (635)
T 4g8a_A 212 PMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 291 (635)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECC
T ss_pred cccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhh
Confidence
Q ss_pred ------------------------------------------------------------------------------Cc
Q 006145 246 ------------------------------------------------------------------------------GK 247 (659)
Q Consensus 246 ------------------------------------------------------------------------------~~ 247 (659)
++
T Consensus 292 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~ 371 (635)
T 4g8a_A 292 DYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLP 371 (635)
T ss_dssp CSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCT
T ss_pred cccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCccccccc
Confidence 01
Q ss_pred ccceEecCCCcCCcc--------------------------------------------------CchhccCCccccEEe
Q 006145 248 KLVTMILSKNKFRSA--------------------------------------------------IPAEVSSYYQLQRLD 277 (659)
Q Consensus 248 ~L~~L~l~~N~l~~~--------------------------------------------------~p~~~~~l~~L~~L~ 277 (659)
+|+.|++++|.+... .+..+..+.+++.++
T Consensus 372 ~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ 451 (635)
T 4g8a_A 372 SLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLD 451 (635)
T ss_dssp TCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEE
T ss_pred ccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhcccccccccccccccccccccc
Confidence 122333344433210 011234566778888
Q ss_pred ccCcccccCCchhhcCCCcccEEeccCCcC-CCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCcccc
Q 006145 278 LSSNRFVGPFPQALLSLPSITYLNIADNKL-TGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLA 356 (659)
Q Consensus 278 Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l-~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~ 356 (659)
+++|.+.+..|..+..+++|+.|++++|++ .+.+|..+..+++|+.|||++|++++..|..+..+++|+.|++++|.++
T Consensus 452 ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~ 531 (635)
T 4g8a_A 452 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF 531 (635)
T ss_dssp CTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCC
T ss_pred ccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCC
Confidence 899999999999999999999999999985 4567888999999999999999999999999999999999999999998
Q ss_pred CCCC
Q 006145 357 AGNE 360 (659)
Q Consensus 357 ~~~~ 360 (659)
+..+
T Consensus 532 ~l~~ 535 (635)
T 4g8a_A 532 SLDT 535 (635)
T ss_dssp BCCC
T ss_pred CCCh
Confidence 7543
No 87
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.96 E-value=3.4e-29 Score=261.06 Aligned_cols=173 Identities=22% Similarity=0.348 Sum_probs=150.0
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccC-CCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCce
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK-CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 554 (659)
++|...+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|++++++++||||+++++++... ....
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 83 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEET-----TTRH 83 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT-----TTCC
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecC-----CCce
Confidence 56778899999999999999976 49999999997544 23456789999999999999999999998752 2346
Q ss_pred eEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceee----cCCcceEEccC
Q 006145 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL----DQNLVAKISSY 630 (659)
Q Consensus 555 ~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl----d~~~~~kl~DF 630 (659)
.++||||+++|+|.+++........+++..+..++.|+++||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Df 160 (319)
T 4euu_A 84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160 (319)
T ss_dssp EEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCC
T ss_pred EEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccC
Confidence 899999999999999998643334599999999999999999999998 99999999999999 78889999999
Q ss_pred ccccccccccccceecccccccCCCCC
Q 006145 631 NLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
|+++............||+.|+|||+.
T Consensus 161 g~a~~~~~~~~~~~~~gt~~y~aPE~~ 187 (319)
T 4euu_A 161 GAARELEDDEQFVSLYGTEEYLHPDMY 187 (319)
T ss_dssp TTCEECCTTCCBCCCCSCGGGCCHHHH
T ss_pred CCceecCCCCceeecccCCCccCHHHh
Confidence 999887666666677899999999964
No 88
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.96 E-value=2.2e-29 Score=265.16 Aligned_cols=171 Identities=23% Similarity=0.345 Sum_probs=147.4
Q ss_pred HhhcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccC---CCchHHHHHHHHHHhCC-CCCCccceeeeeeecccc
Q 006145 474 EATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFD 548 (659)
Q Consensus 474 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~ 548 (659)
...++|...+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|.+++..+ +||||+++++++.+
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~---- 89 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT---- 89 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC----
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEe----
Confidence 34578889999999999999999976 59999999997542 23456788999999877 89999999999976
Q ss_pred CCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEc
Q 006145 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (659)
Q Consensus 549 ~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~ 628 (659)
.+..|+||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+
T Consensus 90 ---~~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~ 160 (345)
T 1xjd_A 90 ---KENLFFVMEYLNGGDLMYHIQSC---HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIA 160 (345)
T ss_dssp ---SSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEEC
T ss_pred ---CCEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEe
Confidence 56799999999999999999752 4689999999999999999999998 99999999999999999999999
Q ss_pred cCccccccc-cccccceecccccccCCCCC
Q 006145 629 SYNLPLLAE-NAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 629 DFGla~~~~-~~~~~~~~~gt~~y~aPE~~ 657 (659)
|||+++... ........+||+.|+|||+.
T Consensus 161 DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~ 190 (345)
T 1xjd_A 161 DFGMCKENMLGDAKTNTFCGTPDYIAPEIL 190 (345)
T ss_dssp CCTTCBCCCCTTCCBCCCCSCGGGCCHHHH
T ss_pred EChhhhhcccCCCcccCCCCCcccCChhhh
Confidence 999997643 23345667899999999975
No 89
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.96 E-value=3.5e-29 Score=260.83 Aligned_cols=167 Identities=22% Similarity=0.341 Sum_probs=146.6
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccC---CCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 551 (659)
.++|+..+.||+|+||+||+|+.. +|+.||+|+++... ....+.+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~------- 77 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD------- 77 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC-------
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe-------
Confidence 356788899999999999999975 59999999997542 2345678899999999999999999999975
Q ss_pred CceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCc
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 631 (659)
....|+||||+++|+|.++++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 78 ~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg 151 (318)
T 1fot_A 78 AQQIFMIMDYIEGGELFSLLRKS---QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFG 151 (318)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHT---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCS
T ss_pred CCEEEEEEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecC
Confidence 56789999999999999999852 4689999999999999999999998 99999999999999999999999999
Q ss_pred cccccccccccceecccccccCCCCC
Q 006145 632 LPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 632 la~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
+++.... .....+||+.|+|||+.
T Consensus 152 ~a~~~~~--~~~~~~gt~~y~aPE~~ 175 (318)
T 1fot_A 152 FAKYVPD--VTYTLCGTPDYIAPEVV 175 (318)
T ss_dssp SCEECSS--CBCCCCSCTTTCCHHHH
T ss_pred cceecCC--ccccccCCccccCHhHh
Confidence 9986643 23456899999999975
No 90
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.96 E-value=3.3e-29 Score=262.88 Aligned_cols=169 Identities=20% Similarity=0.287 Sum_probs=148.8
Q ss_pred hcCCCCCceeccCcCceEEEEEe-cCCcEEEEEEecccC---CCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 551 (659)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++.+
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~------- 80 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITT------- 80 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEEC-------
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-------
Confidence 35688889999999999999996 469999999996432 2234679999999999999999999999976
Q ss_pred CceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCc
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 631 (659)
.+..++||||+ +|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 81 ~~~~~lv~E~~-~g~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG 153 (336)
T 3h4j_B 81 PTDIVMVIEYA-GGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFG 153 (336)
T ss_dssp SSEEEEEECCC-CEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSS
T ss_pred CCEEEEEEECC-CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEec
Confidence 56789999999 78999988752 4699999999999999999999998 99999999999999999999999999
Q ss_pred cccccccccccceecccccccCCCCCC
Q 006145 632 LPLLAENAEKVGHVIPYSGSIDPTNSA 658 (659)
Q Consensus 632 la~~~~~~~~~~~~~gt~~y~aPE~~~ 658 (659)
++............+||+.|+|||+..
T Consensus 154 ~s~~~~~~~~~~~~~gt~~y~aPE~~~ 180 (336)
T 3h4j_B 154 LSNIMTDGNFLKTSCGSPNYAAPEVIN 180 (336)
T ss_dssp CTBTTTTSBTTCCCTTSTTTSCGGGSC
T ss_pred cceeccCCcccccccCCcCcCCHHHHc
Confidence 998877666667789999999999863
No 91
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.96 E-value=4.7e-29 Score=260.94 Aligned_cols=168 Identities=19% Similarity=0.308 Sum_probs=147.9
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC------chHHHHHHHHHHhCCCCCCccceeeeeeeccccC
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH------STRNFMHHIELISKLRHRHLVSALGHCFECYFDD 549 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 549 (659)
+.|...+.||+|+||.||+|+.. +|+.||||.++..... ..+++.+|++++++++||||+++++++.+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----- 85 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN----- 85 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe-----
Confidence 45778899999999999999975 5999999999754322 34679999999999999999999999975
Q ss_pred CCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCc----ce
Q 006145 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL----VA 625 (659)
Q Consensus 550 ~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~----~~ 625 (659)
....++||||+++|+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||++++++ .+
T Consensus 86 --~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~ 157 (326)
T 2y0a_A 86 --KTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRI 157 (326)
T ss_dssp --SSEEEEEEECCCSCBHHHHHTT---SSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCE
T ss_pred --CCEEEEEEEcCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCE
Confidence 5678999999999999999975 24699999999999999999999998 999999999999999887 89
Q ss_pred EEccCccccccccccccceecccccccCCCCC
Q 006145 626 KISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 626 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
||+|||+++............||+.|+|||+.
T Consensus 158 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~ 189 (326)
T 2y0a_A 158 KIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189 (326)
T ss_dssp EECCCTTCEECCTTSCCCCCCSCTTTCCHHHH
T ss_pred EEEECCCCeECCCCCccccccCCcCcCCceee
Confidence 99999999877655555667899999999975
No 92
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.96 E-value=4.2e-29 Score=265.16 Aligned_cols=169 Identities=21% Similarity=0.310 Sum_probs=148.0
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC--chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++|||||++++++.+ .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-------~ 100 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-------E 100 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------S
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-------C
Confidence 467888999999999999999975 5999999999765432 23568999999999999999999999976 5
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCC---cceEEcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN---LVAKISS 629 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~---~~~kl~D 629 (659)
+..|+||||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+|||++.+ +.+||+|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~D 174 (362)
T 2bdw_A 101 SFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLAD 174 (362)
T ss_dssp SEEEEEECCCCSCBHHHHHTTC---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECC
T ss_pred CEEEEEEecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEee
Confidence 6789999999999999998752 4689999999999999999999998 99999999999999865 4599999
Q ss_pred CccccccccccccceecccccccCCCCC
Q 006145 630 YNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 630 FGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
||+++...........+||+.|+|||+.
T Consensus 175 fG~a~~~~~~~~~~~~~gt~~y~aPE~~ 202 (362)
T 2bdw_A 175 FGLAIEVNDSEAWHGFAGTPGYLSPEVL 202 (362)
T ss_dssp CTTCBCCTTCCSCCCSCSCTTTCCHHHH
T ss_pred cCcceEecCCcccccCCCCccccCHHHH
Confidence 9999877665555667899999999975
No 93
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.96 E-value=3.7e-29 Score=263.72 Aligned_cols=168 Identities=20% Similarity=0.312 Sum_probs=145.8
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCc---hHHHHHHHHHHhCC-CCCCccceeeeeeeccccCCC
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS---TRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~---~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~ 551 (659)
++|...+.||+|+||.||+|+.. +|+.||||+++...... .+.+.+|++++.++ +|||||++++++.+
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~------- 81 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT------- 81 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-------
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEe-------
Confidence 46778899999999999999976 58999999997654322 34588999999988 89999999999876
Q ss_pred CceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCc
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 631 (659)
.+..|+||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 82 ~~~~~lv~e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG 155 (345)
T 3a8x_A 82 ESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYG 155 (345)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGG
T ss_pred CCEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecc
Confidence 56789999999999999999752 4689999999999999999999998 99999999999999999999999999
Q ss_pred ccccc-ccccccceecccccccCCCCC
Q 006145 632 LPLLA-ENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 632 la~~~-~~~~~~~~~~gt~~y~aPE~~ 657 (659)
+++.. .........+||+.|+|||+.
T Consensus 156 ~a~~~~~~~~~~~~~~gt~~y~aPE~~ 182 (345)
T 3a8x_A 156 MCKEGLRPGDTTSTFCGTPNYIAPEIL 182 (345)
T ss_dssp GCBCSCCTTCCBCCCCSCGGGCCHHHH
T ss_pred ccccccCCCCcccccCCCccccCcccc
Confidence 99764 233345667899999999975
No 94
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.96 E-value=2.1e-28 Score=274.36 Aligned_cols=139 Identities=27% Similarity=0.362 Sum_probs=128.1
Q ss_pred CCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEc
Q 006145 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (659)
Q Consensus 107 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 186 (659)
++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 68999999999999999999999999999999999999988899999999999999999999888888999999999999
Q ss_pred cCCcCCc-cCCcccCCCCCCcEEeccccccccCCC--CCCCCCcCCEEEcccCCCCCCCCCC
Q 006145 187 RNNMFNG-TLPDSFSYLENLRVLALSNNHFYGEVP--DFSGLTYLQVLDLENNALGPQFPKV 245 (659)
Q Consensus 187 ~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~l~~L~~L~L~~N~l~~~~~~~ 245 (659)
++|.+++ ..|..|+++++|++|++++|.+.+.+| .|.++++|++|++++|.+++..|..
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 167 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQS 167 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTT
T ss_pred CCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhh
Confidence 9999997 467889999999999999999655554 4999999999999999998866643
No 95
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.96 E-value=3.5e-29 Score=264.44 Aligned_cols=169 Identities=19% Similarity=0.278 Sum_probs=147.3
Q ss_pred hcCCCCCceeccCcCceEEEEEecC-CcEEEEEEecccC---CCchHHHHHHHHHHhCC-CCCCccceeeeeeeccccCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKK---CHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDS 550 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~~-g~~vavK~l~~~~---~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~ 550 (659)
.++|...+.||+|+||+||+|+... |+.||||+++... ....+.+.+|.+++..+ +||||+++++++.+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~------ 92 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT------ 92 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEEC------
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEc------
Confidence 4678889999999999999999764 8899999997542 23456789999999998 79999999999875
Q ss_pred CCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccC
Q 006145 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (659)
Q Consensus 551 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 630 (659)
.+..|+||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+|.++.+||+||
T Consensus 93 -~~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DF 165 (353)
T 2i0e_A 93 -MDRLYFVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADF 165 (353)
T ss_dssp -SSEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred -CCEEEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeC
Confidence 56789999999999999999852 4589999999999999999999998 9999999999999999999999999
Q ss_pred ccccccc-cccccceecccccccCCCCC
Q 006145 631 NLPLLAE-NAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~-~~~~~~~~~gt~~y~aPE~~ 657 (659)
|+++... ........+||+.|||||++
T Consensus 166 G~a~~~~~~~~~~~~~~gt~~y~aPE~~ 193 (353)
T 2i0e_A 166 GMCKENIWDGVTTKTFCGTPDYIAPEII 193 (353)
T ss_dssp TTCBCCCCTTCCBCCCCSCGGGCCHHHH
T ss_pred CcccccccCCcccccccCCccccChhhh
Confidence 9997642 33345667899999999975
No 96
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.96 E-value=4.8e-29 Score=256.90 Aligned_cols=169 Identities=20% Similarity=0.319 Sum_probs=141.1
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCc---hHHHHHHHHHHhCCCCCCccceeeeeeeccccCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS---TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~---~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 551 (659)
.++|...+.||+|+||.||+|+.. +++.||+|.+....... .+.|.+|++++++++||||+++++++.+
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~------- 82 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEE------- 82 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEEC-------
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeee-------
Confidence 356888899999999999999965 58999999986544332 3578999999999999999999999875
Q ss_pred CceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCc
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 631 (659)
.+..++||||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 83 ~~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg 156 (294)
T 4eqm_A 83 DDCYYLVMEYIEGPTLSEYIESH---GPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFG 156 (294)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCS
T ss_pred CCeEEEEEeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCC
Confidence 56789999999999999999752 4689999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccc--ccceecccccccCCCCC
Q 006145 632 LPLLAENAE--KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 632 la~~~~~~~--~~~~~~gt~~y~aPE~~ 657 (659)
+++...... ......||+.|+|||+.
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 184 (294)
T 4eqm_A 157 IAKALSETSLTQTNHVLGTVQYFSPEQA 184 (294)
T ss_dssp SSTTC-------------CCSSCCHHHH
T ss_pred CccccccccccccCccccCccccCHhHh
Confidence 997664332 23456799999999974
No 97
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.96 E-value=4e-29 Score=277.87 Aligned_cols=171 Identities=19% Similarity=0.286 Sum_probs=150.3
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccC---CCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 551 (659)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++|++++|||||++++++.+
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~------- 255 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET------- 255 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEee-------
Confidence 456888899999999999999975 69999999996532 2345678999999999999999999999876
Q ss_pred CceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCc
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 631 (659)
.+..|+||||+++|+|.+++... ....+++..+..++.||+.||+|||+. +||||||||+|||++.++.+||+|||
T Consensus 256 ~~~l~lVmEy~~gg~L~~~l~~~-~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFG 331 (576)
T 2acx_A 256 KDALCLVLTLMNGGDLKFHIYHM-GQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLG 331 (576)
T ss_dssp SSEEEEEECCCCSCBHHHHHHSS-SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEEcCCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecc
Confidence 56799999999999999999753 234599999999999999999999998 99999999999999999999999999
Q ss_pred cccccccccccceecccccccCCCCC
Q 006145 632 LPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 632 la~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
+++...........+||+.|||||++
T Consensus 332 la~~~~~~~~~~~~~GT~~Y~APEvl 357 (576)
T 2acx_A 332 LAVHVPEGQTIKGRVGTVGYMAPEVV 357 (576)
T ss_dssp TCEECCTTCCEECCCSCGGGCCHHHH
T ss_pred cceecccCccccccCCCccccCHHHH
Confidence 99877665555667999999999975
No 98
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.96 E-value=6e-29 Score=265.91 Aligned_cols=170 Identities=16% Similarity=0.241 Sum_probs=149.4
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCce
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 554 (659)
.++|...+.||+|+||.||+|+.. +|+.||+|.+..........+.+|++++++++|||||++++++.+ ...
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-------~~~ 122 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFED-------KYE 122 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC-------SSE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEe-------CCE
Confidence 457888999999999999999975 589999999976543345679999999999999999999999976 567
Q ss_pred eEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecC--CcceEEccCcc
Q 006145 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ--NLVAKISSYNL 632 (659)
Q Consensus 555 ~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~--~~~~kl~DFGl 632 (659)
.++||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||++. ++.+||+|||+
T Consensus 123 ~~lv~E~~~gg~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~ 197 (387)
T 1kob_A 123 MVLILEFLSGGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGL 197 (387)
T ss_dssp EEEEEECCCCCBHHHHTTCT--TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTT
T ss_pred EEEEEEcCCCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEeccc
Confidence 89999999999999999753 24699999999999999999999998 9999999999999984 47899999999
Q ss_pred ccccccccccceecccccccCCCCC
Q 006145 633 PLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
++............||+.|+|||+.
T Consensus 198 a~~~~~~~~~~~~~gt~~y~aPE~~ 222 (387)
T 1kob_A 198 ATKLNPDEIVKVTTATAEFAAPEIV 222 (387)
T ss_dssp CEECCTTSCEEEECSSGGGCCHHHH
T ss_pred ceecCCCcceeeeccCCCccCchhc
Confidence 9887665556677899999999975
No 99
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.3e-28 Score=260.58 Aligned_cols=272 Identities=19% Similarity=0.188 Sum_probs=224.0
Q ss_pred CCCCCCCCCcCCCCCCCceEeCC-----------CCEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCC
Q 006145 51 SWNITTEFCNTEPTSSLTVVCYE-----------ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGL 119 (659)
Q Consensus 51 ~W~~~~~~C~w~~~~~~gv~C~~-----------~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l 119 (659)
.|.....+|.|.+ .+.|.. .+++.|++++|.+.+..+ ..+.++++|++|+|++|.+
T Consensus 22 ~~~~~~~~C~~~~----~c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~---------~~~~~l~~L~~L~L~~n~l 88 (353)
T 2z80_A 22 SSNQASLSCDRNG----ICKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISN---------SDLQRCVNLQALVLTSNGI 88 (353)
T ss_dssp -----CCEECTTS----EEECCSTTCSSCCTTCCTTCCEEECTTSCCCEECT---------TTTTTCTTCCEEECTTSCC
T ss_pred CCCccCCCCCCCe----EeeCCCCCcccccccccccCcEEECCCCcCcccCH---------HHhccCCCCCEEECCCCcc
Confidence 3555567788864 133322 268899999888764322 2577899999999999999
Q ss_pred cCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCc-cccCCCCCCCEEEccCC-cCCccCCc
Q 006145 120 WGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVP-DWLGSLPILAVLSLRNN-MFNGTLPD 197 (659)
Q Consensus 120 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~N-~l~~~~p~ 197 (659)
++..|..|.++++|++|+|++|.+++..+..+.++++|++|+|++|++++..+ ..+..+++|++|++++| .+.+..|.
T Consensus 89 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~ 168 (353)
T 2z80_A 89 NTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRK 168 (353)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTT
T ss_pred CccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHH
Confidence 99999999999999999999999997656669999999999999999985444 48999999999999999 57777788
Q ss_pred ccCCCCCCcEEeccccccccCCCC-CCCCCcCCEEEcccCCCCCCCCCC---CcccceEecCCCcCCccCchhcc---CC
Q 006145 198 SFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKV---GKKLVTMILSKNKFRSAIPAEVS---SY 270 (659)
Q Consensus 198 ~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~---~l 270 (659)
.|.++++|++|++++|++++..|. +..+++|++|++++|.++...+.. .++|+.|++++|.+++..+..+. ..
T Consensus 169 ~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~ 248 (353)
T 2z80_A 169 DFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETN 248 (353)
T ss_dssp TTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CC
T ss_pred HccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccccccc
Confidence 999999999999999999998765 999999999999999986443322 57999999999999987665543 46
Q ss_pred ccccEEeccCccccc----CCchhhcCCCcccEEeccCCcCCCcCCcC-CCCCCCCCEEECcCCCCcccCC
Q 006145 271 YQLQRLDLSSNRFVG----PFPQALLSLPSITYLNIADNKLTGKLFDD-LSCNPELGFVDLSSNLLTGQLP 336 (659)
Q Consensus 271 ~~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~L~~L~ls~N~l~g~ip 336 (659)
..++.++|++|.+++ .+|..+..+++|+.|++++|+++. +|.. +..+++|+.|++++|++++..|
T Consensus 249 ~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~-i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 249 SLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred chhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCc-cCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 678899999998876 478899999999999999999995 5554 6899999999999999998876
No 100
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.96 E-value=2.2e-27 Score=250.22 Aligned_cols=260 Identities=19% Similarity=0.252 Sum_probs=208.9
Q ss_pred CCEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccC
Q 006145 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (659)
Q Consensus 74 ~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (659)
.+++.|++++|.+... +. +.++++|++|+|++|.++.. +.|.++++|++|++++|.+++. |. +..
T Consensus 66 ~~L~~L~l~~n~i~~~----------~~-~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~l~~n~i~~~-~~-~~~ 130 (347)
T 4fmz_A 66 TNLEYLNLNGNQITDI----------SP-LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYLNEDNISDI-SP-LAN 130 (347)
T ss_dssp TTCCEEECCSSCCCCC----------GG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEECTTSCCCCC-GG-GTT
T ss_pred CCccEEEccCCccccc----------hh-hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEEECcCCcccCc-hh-hcc
Confidence 4577777777765422 22 67788888888888888763 3588888888888888888754 33 788
Q ss_pred CCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEeccccccccCCCCCCCCCcCCEEEc
Q 006145 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDL 233 (659)
Q Consensus 154 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L 233 (659)
+++|++|++++|.....++. +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++
T Consensus 131 l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l 206 (347)
T 4fmz_A 131 LTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP-LASLTSLHYFTA 206 (347)
T ss_dssp CTTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG-GGGCTTCCEEEC
T ss_pred CCceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc-ccCCCccceeec
Confidence 88888888888866655444 8888888888888888875443 7888889999999888876544 788888999999
Q ss_pred ccCCCCCCCCC-CCcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCC
Q 006145 234 ENNALGPQFPK-VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLF 312 (659)
Q Consensus 234 ~~N~l~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 312 (659)
++|.+.+..+. .+++|+.|++++|++++..+ +..+++|+.|++++|.+++. +.+..+++|+.|++++|++++.
T Consensus 207 ~~n~l~~~~~~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-- 280 (347)
T 4fmz_A 207 YVNQITDITPVANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI-- 280 (347)
T ss_dssp CSSCCCCCGGGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--
T ss_pred ccCCCCCCchhhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--
Confidence 99888776542 35789999999999987544 88899999999999999863 4688999999999999999875
Q ss_pred cCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCccccCC
Q 006145 313 DDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAG 358 (659)
Q Consensus 313 ~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~~~ 358 (659)
+.+..+++|+.|++++|++++..|..+..+++++.+++++|.+++.
T Consensus 281 ~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 326 (347)
T 4fmz_A 281 SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDI 326 (347)
T ss_dssp GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCC
T ss_pred hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccc
Confidence 4578889999999999999998889999999999999999998854
No 101
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.96 E-value=4.4e-29 Score=265.82 Aligned_cols=172 Identities=20% Similarity=0.416 Sum_probs=144.4
Q ss_pred hcCCCCCceeccCcCceEEEEEec--------CCcEEEEEEecccCCC-chHHHHHHHHHHhCC-CCCCccceeeeeeec
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK--------NGTFVAIRCLKMKKCH-STRNFMHHIELISKL-RHRHLVSALGHCFEC 545 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~-~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~ 545 (659)
.++|...+.||+|+||.||+|+.. ++..||||+++..... ..+++.+|+++++++ +|||||+++++|..
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~- 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ- 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS-
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc-
Confidence 467788899999999999999852 3568999999765322 245799999999999 89999999999975
Q ss_pred cccCCCCceeEEEEeccCCCChhhhhcCCCC-------------CCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCC
Q 006145 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHA-------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNL 612 (659)
Q Consensus 546 ~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDl 612 (659)
.+..|+||||+++|+|.++++.... ...+++.++..++.||++||+|||+. +|+||||
T Consensus 159 ------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDl 229 (370)
T 2psq_A 159 ------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDL 229 (370)
T ss_dssp ------SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred ------CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceecccc
Confidence 4568999999999999999975321 23589999999999999999999998 9999999
Q ss_pred CCCceeecCCcceEEccCcccccccccc---ccceecccccccCCCCC
Q 006145 613 KITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 613 k~~NILld~~~~~kl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~ 657 (659)
||+|||+++++.+||+|||+++...... ......+|+.|||||+.
T Consensus 230 kp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~ 277 (370)
T 2psq_A 230 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 277 (370)
T ss_dssp CGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHH
T ss_pred chhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHh
Confidence 9999999999999999999998654322 22345678899999964
No 102
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.96 E-value=2.2e-27 Score=259.55 Aligned_cols=252 Identities=23% Similarity=0.186 Sum_probs=186.7
Q ss_pred CCEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccC
Q 006145 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (659)
Q Consensus 74 ~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (659)
.+++.|++++|.+.+. | .+..+++|++|+|++|.+++. | ++.+++|++|+|++|.+++. | +++
T Consensus 42 ~~L~~L~Ls~n~l~~~-~----------~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~ 104 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T----------GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTP 104 (457)
T ss_dssp TTCCEEECCSSCCCCC-T----------TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTT
T ss_pred CCCCEEEccCCCcccC-h----------hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCC
Confidence 4688888888877642 2 356788888888888888774 3 78888888888888888864 3 778
Q ss_pred CCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEeccccccccCCCCCCCCCcCCEEEc
Q 006145 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDL 233 (659)
Q Consensus 154 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L 233 (659)
+++|++|+|++|++++ +| ++.+++|++|++++|.+++. | ++++++|++|++++|+..+.+ .+..+++|++|++
T Consensus 105 l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~-~~~~l~~L~~L~l 177 (457)
T 3bz5_A 105 LTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL-DVTPQTQLTTLDC 177 (457)
T ss_dssp CTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC-CCTTCTTCCEEEC
T ss_pred CCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc-ccccCCcCCEEEC
Confidence 8888888888888876 44 78888888888888888863 3 778888888888888666555 4777888888888
Q ss_pred ccCCCCCCCCCCCcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCc
Q 006145 234 ENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFD 313 (659)
Q Consensus 234 ~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~ 313 (659)
++|++++.....+++|+.|++++|++++. .++.+++|+.|++++|++++ +| +..+++|+.|++++|++++..+.
T Consensus 178 s~n~l~~l~l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~ 251 (457)
T 3bz5_A 178 SFNKITELDVSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVS 251 (457)
T ss_dssp CSSCCCCCCCTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCT
T ss_pred CCCccceeccccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHH
Confidence 88888775544467788888888888774 37777888888888888876 55 77788888888888888876555
Q ss_pred CCCCCC-------CCCEEECcCCCCcccCChhhhCCCCCCEEEcCCccccC
Q 006145 314 DLSCNP-------ELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (659)
Q Consensus 314 ~~~~~~-------~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~~ 357 (659)
.+..+. +|+.|++++|.+.|.+| +..+++++.+++++|.+.+
T Consensus 252 ~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~ 300 (457)
T 3bz5_A 252 TLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLY 300 (457)
T ss_dssp TCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCC
T ss_pred HCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccc
Confidence 554443 45566666666666666 3455667777777776543
No 103
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=1.8e-27 Score=259.43 Aligned_cols=231 Identities=21% Similarity=0.192 Sum_probs=208.9
Q ss_pred CCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCC
Q 006145 123 LSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYL 202 (659)
Q Consensus 123 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 202 (659)
+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+
T Consensus 58 iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 135 (440)
T 3zyj_A 58 VPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYL 135 (440)
T ss_dssp CCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSC
T ss_pred CCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhcc
Confidence 444443 689999999999999888999999999999999999998888999999999999999999997777789999
Q ss_pred CCCcEEeccccccccCCCC-CCCCCcCCEEEcccCCCCCCCCC----CCcccceEecCCCcCCccCchhccCCccccEEe
Q 006145 203 ENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPK----VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLD 277 (659)
Q Consensus 203 ~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~----~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 277 (659)
++|++|+|++|+++...+. |.++++|++|+|++|+..+.++. .+++|+.|+|++|+++. +| .+..+++|+.|+
T Consensus 136 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~ 213 (440)
T 3zyj_A 136 SKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELD 213 (440)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC-CCTTCSSCCEEE
T ss_pred ccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc-ccCCCcccCEEE
Confidence 9999999999999987774 99999999999999654444433 25799999999999985 45 488999999999
Q ss_pred ccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCccccC
Q 006145 278 LSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (659)
Q Consensus 278 Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~~ 357 (659)
|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|+.|||++|++++..+..+..+++++.+++++|.+.+
T Consensus 214 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 214 LSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred CCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 99999999999999999999999999999999999999999999999999999998777788889999999999998875
No 104
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.96 E-value=3.6e-29 Score=266.05 Aligned_cols=170 Identities=15% Similarity=0.140 Sum_probs=144.1
Q ss_pred hhcCCCCCceeccCcCceEEEEE------ecCCcEEEEEEecccCCCchHHHHHHHHHHhCCC---CCCccceeeeeeec
Q 006145 475 ATNNFDTSAFMGEGSQGQMYRGR------LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR---HRHLVSALGHCFEC 545 (659)
Q Consensus 475 ~~~~~~~~~~ig~G~~g~Vy~~~------~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~---H~niv~l~g~~~~~ 545 (659)
..++|...+.||+|+||+||+|+ ..+++.||||+++.. ...++.+|++++.+++ |+||+++++++..
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~- 138 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF- 138 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC-
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec-
Confidence 35678888999999999999994 346899999999743 3567888988888887 9999999999986
Q ss_pred cccCCCCceeEEEEeccCCCChhhhhcCC--CCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecC--
Q 006145 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEG--HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ-- 621 (659)
Q Consensus 546 ~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~--~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~-- 621 (659)
.+..++|||||++|+|.++++.. .....++|..+..|+.|+++||+|||+. +||||||||+|||++.
T Consensus 139 ------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~ 209 (365)
T 3e7e_A 139 ------QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGF 209 (365)
T ss_dssp ------SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGG
T ss_pred ------CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccc
Confidence 46689999999999999999731 1235699999999999999999999998 9999999999999998
Q ss_pred ---------CcceEEccCccccccc---cccccceecccccccCCCCC
Q 006145 622 ---------NLVAKISSYNLPLLAE---NAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 622 ---------~~~~kl~DFGla~~~~---~~~~~~~~~gt~~y~aPE~~ 657 (659)
++.+||+|||+|+... ........+||+.|||||+.
T Consensus 210 ~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~ 257 (365)
T 3e7e_A 210 LEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEML 257 (365)
T ss_dssp TCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHH
T ss_pred cCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHh
Confidence 8999999999996543 33344567899999999975
No 105
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.96 E-value=3.9e-29 Score=266.42 Aligned_cols=165 Identities=21% Similarity=0.280 Sum_probs=140.2
Q ss_pred CCceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCceeEEEE
Q 006145 481 TSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIF 559 (659)
Q Consensus 481 ~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~~lV~ 559 (659)
..+.||+|+||.||+|+.. +|+.||||+++.......+++.+|++++++++|||||+++++|.+ .+..++||
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-------~~~~~lv~ 165 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFES-------KNDIVLVM 165 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------SSEEEEEE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEE-------CCEEEEEE
Confidence 3578999999999999965 599999999986554456789999999999999999999999976 56789999
Q ss_pred eccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceee--cCCcceEEccCccccccc
Q 006145 560 EYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL--DQNLVAKISSYNLPLLAE 637 (659)
Q Consensus 560 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl--d~~~~~kl~DFGla~~~~ 637 (659)
||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||+ ++++.+||+|||+++...
T Consensus 166 E~~~~~~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~ 240 (373)
T 2x4f_A 166 EYVDGGELFDRIIDE--SYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYK 240 (373)
T ss_dssp ECCTTCEEHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECC
T ss_pred eCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecC
Confidence 999999999988742 24689999999999999999999998 99999999999999 567899999999998876
Q ss_pred cccccceecccccccCCCCC
Q 006145 638 NAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 638 ~~~~~~~~~gt~~y~aPE~~ 657 (659)
........+||+.|+|||+.
T Consensus 241 ~~~~~~~~~gt~~y~aPE~~ 260 (373)
T 2x4f_A 241 PREKLKVNFGTPEFLAPEVV 260 (373)
T ss_dssp TTCBCCCCCSSCTTCCHHHH
T ss_pred CccccccccCCCcEeChhhc
Confidence 66556667899999999964
No 106
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.96 E-value=6e-29 Score=259.81 Aligned_cols=169 Identities=21% Similarity=0.307 Sum_probs=144.6
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCC-CchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
.++|+..+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|+++++.++||||+++++++.+ .+
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-------~~ 78 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-------GN 78 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEEC-------SS
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEec-------CC
Confidence 357888899999999999999976 699999999975443 233568999999999999999999999976 56
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCccc
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla 633 (659)
..++||||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a 152 (323)
T 3tki_A 79 IQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLA 152 (323)
T ss_dssp EEEEEEECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEEcCCCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeecc
Confidence 789999999999999999752 4699999999999999999999998 9999999999999999999999999999
Q ss_pred cccccc---cccceecccccccCCCCC
Q 006145 634 LLAENA---EKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 634 ~~~~~~---~~~~~~~gt~~y~aPE~~ 657 (659)
+..... ......+||+.|+|||+.
T Consensus 153 ~~~~~~~~~~~~~~~~gt~~y~aPE~~ 179 (323)
T 3tki_A 153 TVFRYNNRERLLNKMCGTLPYVAPELL 179 (323)
T ss_dssp EECEETTEECCBCSCCSCGGGSCHHHH
T ss_pred ceeccCCcccccCCCccCcCccCcHHh
Confidence 765322 223467899999999975
No 107
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.95 E-value=9.8e-29 Score=254.98 Aligned_cols=168 Identities=19% Similarity=0.375 Sum_probs=140.9
Q ss_pred hcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhC--CCCCCccceeeeeeeccccCCCCc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISK--LRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~--l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
.++|...+.||+|+||+||+|+. +|+.||||++... ..+.+.+|.+++.. ++||||+++++++..... ...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~---~~~ 79 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRH---SST 79 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEET---TEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccC---CCc
Confidence 45788899999999999999988 5899999998643 34556677777665 799999999999875321 235
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhc--------CCCCCCccccCCCCCceeecCCcce
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH--------TGIVPGVFSNNLKITDILLDQNLVA 625 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~iiHrDlk~~NILld~~~~~ 625 (659)
..++||||+++|+|.++++. ..+++..+.+++.|+++||+||| +. +|+||||||+|||++.++.+
T Consensus 80 ~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~ 152 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQC 152 (301)
T ss_dssp EEEEEECCCTTCBHHHHHTT----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCE
T ss_pred eeEEehhhccCCCHHHHHhh----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCE
Confidence 68999999999999999974 46999999999999999999999 65 99999999999999999999
Q ss_pred EEccCccccccccccc-----cceecccccccCCCCC
Q 006145 626 KISSYNLPLLAENAEK-----VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 626 kl~DFGla~~~~~~~~-----~~~~~gt~~y~aPE~~ 657 (659)
||+|||+++....... ....+||+.|+|||+.
T Consensus 153 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 189 (301)
T 3q4u_A 153 CIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189 (301)
T ss_dssp EECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHH
T ss_pred EEeeCCCeeecccccccccccccccccccceeChhhh
Confidence 9999999976543322 2334899999999975
No 108
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.95 E-value=1.2e-28 Score=267.01 Aligned_cols=169 Identities=18% Similarity=0.270 Sum_probs=137.4
Q ss_pred hhcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCC--------CchHHHHHHHHHHhCCCCCCccceeeeeeec
Q 006145 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--------HSTRNFMHHIELISKLRHRHLVSALGHCFEC 545 (659)
Q Consensus 475 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--------~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~ 545 (659)
..++|...+.||+|+||.||+|+.. +++.||||++..... .....+.+|+++|++++|||||++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 4578999999999999999999965 589999999975421 112358999999999999999999999853
Q ss_pred cccCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCC---
Q 006145 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN--- 622 (659)
Q Consensus 546 ~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~--- 622 (659)
+..++||||+++|+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+|||++.+
T Consensus 212 -------~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~ 278 (419)
T 3i6u_A 212 -------EDYYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEED 278 (419)
T ss_dssp -------SEEEEEEECCTTCBGGGGTSS---SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSS
T ss_pred -------CceEEEEEcCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCc
Confidence 457999999999999999875 24699999999999999999999998 99999999999999754
Q ss_pred cceEEccCccccccccccccceecccccccCCCCC
Q 006145 623 LVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 623 ~~~kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
+.+||+|||+++...........+||+.|+|||+.
T Consensus 279 ~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~ 313 (419)
T 3i6u_A 279 CLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 313 (419)
T ss_dssp CCEEECCSSTTTSCC-----------CTTCCTTTT
T ss_pred ceEEEeecccceecCCCccccccCCCCCccCceee
Confidence 45999999999887666556678899999999986
No 109
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.95 E-value=6.3e-29 Score=259.87 Aligned_cols=170 Identities=22% Similarity=0.393 Sum_probs=141.3
Q ss_pred hcCCCCCceeccCcCceEEEEEec----CCcEEEEEEecccCCC-chHHHHHHHHHHhCCCCCCccceeeeeeeccccCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 550 (659)
.++|...+.||+|+||.||+|+.. .+..||||+++..... ..++|.+|++++++++||||++++++|.+
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------ 121 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR------ 121 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG------
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe------
Confidence 356777899999999999999974 3556999999765332 34579999999999999999999999975
Q ss_pred CCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccC
Q 006145 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (659)
Q Consensus 551 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 630 (659)
.+..++||||+++|+|.++++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 122 -~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Df 195 (325)
T 3kul_A 122 -GRLAMIVTEYMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDF 195 (325)
T ss_dssp -GGCCEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred -CCccEEEeeCCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCC
Confidence 45689999999999999999753 24699999999999999999999998 9999999999999999999999999
Q ss_pred ccccccccccc----cceecccccccCCCCC
Q 006145 631 NLPLLAENAEK----VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~~~~~----~~~~~gt~~y~aPE~~ 657 (659)
|+++....... .....+|+.|+|||+.
T Consensus 196 g~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~ 226 (325)
T 3kul_A 196 GLSRVLEDDPDAAYTTTGGKIPIRWTAPEAI 226 (325)
T ss_dssp SSCEECC----CCEECC---CCGGGSCHHHH
T ss_pred CcccccccCccceeeccCCCCcccccCHhHh
Confidence 99987643321 2334567789999974
No 110
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.95 E-value=4.8e-29 Score=265.74 Aligned_cols=170 Identities=24% Similarity=0.419 Sum_probs=134.4
Q ss_pred hcCCCCCceeccCcCceEEEEEec----CCcEEEEEEecccCCC-chHHHHHHHHHHhCCCCCCccceeeeeeeccccCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 550 (659)
.++|...+.||+|+||.||+|+.. ++..||||+++..... ..++|.+|++++++++||||++++++|.+
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------ 117 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK------ 117 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee------
Confidence 357888999999999999999965 4778999999765322 34579999999999999999999999975
Q ss_pred CCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccC
Q 006145 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (659)
Q Consensus 551 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 630 (659)
.+..++||||+++|+|.++++.. ...+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 118 -~~~~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Df 191 (373)
T 2qol_A 118 -SKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDF 191 (373)
T ss_dssp -SSSCEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC
T ss_pred -CCceEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcC
Confidence 45689999999999999999853 34699999999999999999999998 9999999999999999999999999
Q ss_pred ccccccccccc----cceecccccccCCCCC
Q 006145 631 NLPLLAENAEK----VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~~~~~----~~~~~gt~~y~aPE~~ 657 (659)
|+++....... .....+++.|+|||+.
T Consensus 192 g~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 222 (373)
T 2qol_A 192 GLGRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222 (373)
T ss_dssp ----------------------CTTSCHHHH
T ss_pred ccccccccCCccceeccCCCcCCCccChhhh
Confidence 99987643321 1223457789999974
No 111
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.95 E-value=5e-29 Score=260.28 Aligned_cols=173 Identities=17% Similarity=0.342 Sum_probs=145.3
Q ss_pred hcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCcee
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~ 555 (659)
.++|+..+.||+|+||+||+|+.. ++.||||++.... .....+.+|+.++++++|||||++++++..... .....
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~---~~~~~ 97 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTS---VDVDL 97 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS---SSEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCC---CCceE
Confidence 467888899999999999999875 8999999996543 223457779999999999999999999986321 13457
Q ss_pred EEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCC-------CCCccccCCCCCceeecCCcceEEc
Q 006145 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI-------VPGVFSNNLKITDILLDQNLVAKIS 628 (659)
Q Consensus 556 ~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-------~~~iiHrDlk~~NILld~~~~~kl~ 628 (659)
++||||+++|+|.++++. ..++|..+..++.|+++||+|||+.+ .++|+||||||+||++++++.+||+
T Consensus 98 ~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~ 173 (322)
T 3soc_A 98 WLITAFHEKGSLSDFLKA----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173 (322)
T ss_dssp EEEEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEc
Confidence 999999999999999985 35999999999999999999999852 3489999999999999999999999
Q ss_pred cCccccccccccc---cceecccccccCCCCC
Q 006145 629 SYNLPLLAENAEK---VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 629 DFGla~~~~~~~~---~~~~~gt~~y~aPE~~ 657 (659)
|||+++....... ....+||+.|+|||+.
T Consensus 174 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~ 205 (322)
T 3soc_A 174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVL 205 (322)
T ss_dssp CCTTCEEECTTSCCCCCTTCCCCGGGCCHHHH
T ss_pred cCCcccccccccCccccccCccCccccCHhhc
Confidence 9999976643322 2346899999999975
No 112
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.95 E-value=9.1e-29 Score=270.99 Aligned_cols=168 Identities=22% Similarity=0.350 Sum_probs=149.5
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccC---CCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+ .
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~-------~ 88 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST-------P 88 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------S
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-------C
Confidence 56788899999999999999975 69999999996542 2234679999999999999999999999976 5
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
+..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 89 ~~~~lv~E~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~ 162 (476)
T 2y94_A 89 SDIFMVMEYVSGGELFDYICK---NGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGL 162 (476)
T ss_dssp SEEEEEEECCSSEEHHHHTTS---SSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSS
T ss_pred CEEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccc
Confidence 678999999999999999975 24699999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccceecccccccCCCCC
Q 006145 633 PLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
++...........+||+.|+|||+.
T Consensus 163 a~~~~~~~~~~~~~gt~~y~aPE~~ 187 (476)
T 2y94_A 163 SNMMSDGEFLRTSCGSPNYAAPEVI 187 (476)
T ss_dssp CEECCTTCCBCCCCSCSTTCCHHHH
T ss_pred hhhccccccccccCCCcCeEChhhc
Confidence 9887665556678899999999975
No 113
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.95 E-value=6.9e-29 Score=262.07 Aligned_cols=166 Identities=17% Similarity=0.271 Sum_probs=146.4
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccC---CCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+ .
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~ 113 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD-------N 113 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------S
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-------C
Confidence 56888899999999999999975 59999999996542 2345678999999999999999999999876 5
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
+..|+||||+++|+|.+++.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 114 ~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~ 187 (350)
T 1rdq_E 114 SNLYMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGF 187 (350)
T ss_dssp SEEEEEEECCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEccccc
Confidence 6789999999999999999852 4589999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccceecccccccCCCCC
Q 006145 633 PLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
++..... ....+||+.|+|||+.
T Consensus 188 a~~~~~~--~~~~~gt~~y~aPE~~ 210 (350)
T 1rdq_E 188 AKRVKGR--TWTLCGTPEALAPEII 210 (350)
T ss_dssp CEECSSC--BCCCEECGGGCCHHHH
T ss_pred ceeccCC--cccccCCccccCHHHh
Confidence 9876442 3456899999999975
No 114
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.95 E-value=3.2e-27 Score=258.26 Aligned_cols=253 Identities=23% Similarity=0.162 Sum_probs=142.2
Q ss_pred CCEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccC
Q 006145 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (659)
Q Consensus 74 ~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (659)
.+++.|++++|.+.+. | +..+++|++|+|++|.+++. | ++++++|++|++++|.+++ +| ++.
T Consensus 64 ~~L~~L~Ls~n~l~~~-~-----------~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~ 125 (457)
T 3bz5_A 64 TGLTKLICTSNNITTL-D-----------LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQ 125 (457)
T ss_dssp TTCSEEECCSSCCSCC-C-----------CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTT
T ss_pred CCCCEEEccCCcCCeE-c-----------cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCC
Confidence 5788899988887652 1 44566666666666666653 2 6666666666666666665 33 666
Q ss_pred CCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEeccccccccCCCCCCCCCcCCEEEc
Q 006145 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDL 233 (659)
Q Consensus 154 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L 233 (659)
+++|++|++++|++++. | ++.+++|++|++++|...+.+ .++.+++|+.|++++|++++. | +..+++|+.|++
T Consensus 126 l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l-~-l~~l~~L~~L~l 198 (457)
T 3bz5_A 126 NPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITEL-D-VSQNKLLNRLNC 198 (457)
T ss_dssp CTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCC-C-CTTCTTCCEEEC
T ss_pred CCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCcccee-c-cccCCCCCEEEC
Confidence 66666666666666652 2 555666666666666444444 255556666666666665553 2 555555555555
Q ss_pred ccCCCCCCCCCCCcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhh----------------------
Q 006145 234 ENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQAL---------------------- 291 (659)
Q Consensus 234 ~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l---------------------- 291 (659)
++|.+++.....+++|+.|++++|++++ +| ++.+++|+.|++++|++++..+..+
T Consensus 199 ~~N~l~~~~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~ 275 (457)
T 3bz5_A 199 DTNNITKLDLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNT 275 (457)
T ss_dssp CSSCCSCCCCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCT
T ss_pred cCCcCCeeccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCc
Confidence 5555555432334555555555555555 33 4555555555555555555433333
Q ss_pred -------cCCCcccEEeccCCcCCCcCCc--------CCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCcccc
Q 006145 292 -------LSLPSITYLNIADNKLTGKLFD--------DLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLA 356 (659)
Q Consensus 292 -------~~l~~L~~L~l~~N~l~~~~p~--------~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~ 356 (659)
+.+++|+.|++++|.+.+.+|. .+..+++|+.|++++|+++| +| +..+++++.+++++|+++
T Consensus 276 ~~~~~~~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~-l~--l~~l~~L~~L~l~~N~l~ 352 (457)
T 3bz5_A 276 QLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTE-LD--VSHNTKLKSLSCVNAHIQ 352 (457)
T ss_dssp TCCEEECTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSC-CC--CTTCTTCSEEECCSSCCC
T ss_pred cCCcccccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCcccc-cc--cccCCcCcEEECCCCCCC
Confidence 3344455555555544444332 13344555555555555555 22 455555555555555555
Q ss_pred C
Q 006145 357 A 357 (659)
Q Consensus 357 ~ 357 (659)
+
T Consensus 353 ~ 353 (457)
T 3bz5_A 353 D 353 (457)
T ss_dssp B
T ss_pred C
Confidence 3
No 115
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.95 E-value=9.2e-29 Score=251.12 Aligned_cols=168 Identities=21% Similarity=0.355 Sum_probs=146.0
Q ss_pred cCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCceeE
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~~ 556 (659)
++|...+.||+|+||.||+|+..+++.||||++..... ..+++.+|++++++++||||+++++++.+ .+..+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~~~~~ 81 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLE-------QAPIC 81 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECS-------SSSEE
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEec-------CCceE
Confidence 56777899999999999999988899999999975542 45779999999999999999999999975 45689
Q ss_pred EEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcccccc
Q 006145 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (659)
Q Consensus 557 lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~ 636 (659)
+||||+++|+|.++++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 82 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 156 (269)
T 4hcu_A 82 LVFEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFV 156 (269)
T ss_dssp EEEECCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGB
T ss_pred EEEEeCCCCcHHHHHHhc--CcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccc
Confidence 999999999999999753 24689999999999999999999998 9999999999999999999999999999766
Q ss_pred cccc--ccceecccccccCCCCC
Q 006145 637 ENAE--KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 637 ~~~~--~~~~~~gt~~y~aPE~~ 657 (659)
.... ......+|+.|+|||+.
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~ 179 (269)
T 4hcu_A 157 LDDQYTSSTGTKFPVKWASPEVF 179 (269)
T ss_dssp CCHHHHSTTSTTCCGGGCCHHHH
T ss_pred cccccccccCcccccccCCHHHh
Confidence 4322 22445678889999974
No 116
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.95 E-value=6.3e-29 Score=258.21 Aligned_cols=168 Identities=17% Similarity=0.153 Sum_probs=139.7
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC--chHHHHHHHHHHhCC-CCCCccceeeeeeeccccCCCC
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~~ 552 (659)
++|+..+.||+|+||+||+|+.. +|+.||||++...... ...++.+|+..+.++ +||||++++++|.+ .
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~-------~ 129 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE-------G 129 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------T
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe-------C
Confidence 56888999999999999999976 6999999998654332 223466666666655 89999999999986 5
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
+..++||||+ +|+|.+++... ...++|..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 130 ~~~~lv~e~~-~~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~ 203 (311)
T 3p1a_A 130 GILYLQTELC-GPSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGL 203 (311)
T ss_dssp TEEEEEEECC-CCBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTT
T ss_pred CEEEEEEecc-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEcccee
Confidence 6789999999 67999988753 24699999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccceecccccccCCCCC
Q 006145 633 PLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
++............||+.|+|||+.
T Consensus 204 a~~~~~~~~~~~~~gt~~y~aPE~~ 228 (311)
T 3p1a_A 204 LVELGTAGAGEVQEGDPRYMAPELL 228 (311)
T ss_dssp CEECC------CCCCCGGGCCGGGG
T ss_pred eeecccCCCCcccCCCccccCHhHh
Confidence 9877665555667899999999975
No 117
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.95 E-value=1.7e-27 Score=251.05 Aligned_cols=258 Identities=23% Similarity=0.264 Sum_probs=224.9
Q ss_pred CCEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccC
Q 006145 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (659)
Q Consensus 74 ~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (659)
.+++.|++++|.+... +.+.++++|++|+|++|.+.+..+ +..+++|+.|++++|.....++. +..
T Consensus 88 ~~L~~L~L~~n~i~~~-----------~~~~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~~-~~~ 153 (347)
T 4fmz_A 88 VKLTNLYIGTNKITDI-----------SALQNLTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLSP-LSN 153 (347)
T ss_dssp TTCCEEECCSSCCCCC-----------GGGTTCTTCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCGG-GTT
T ss_pred CcCCEEEccCCcccCc-----------hHHcCCCcCCEEECcCCcccCchh--hccCCceeEEECCCCCCcccccc-hhh
Confidence 5789999999876531 257899999999999999987544 99999999999999977655554 899
Q ss_pred CCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEeccccccccCCCCCCCCCcCCEEEc
Q 006145 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDL 233 (659)
Q Consensus 154 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L 233 (659)
+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+. +. +..+++|+.|++++|.+++..+ +..+++|++|++
T Consensus 154 l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l 228 (347)
T 4fmz_A 154 MTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDI-SP-LASLTSLHYFTAYVNQITDITP-VANMTRLNSLKI 228 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCC-GG-GGGCTTCCEEECCSSCCCCCGG-GGGCTTCCEEEC
T ss_pred CCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccc-cc-ccCCCccceeecccCCCCCCch-hhcCCcCCEEEc
Confidence 9999999999999986544 88999999999999999854 33 8899999999999999987655 889999999999
Q ss_pred ccCCCCCCCC-CCCcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCC
Q 006145 234 ENNALGPQFP-KVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLF 312 (659)
Q Consensus 234 ~~N~l~~~~~-~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 312 (659)
++|.+++..+ ..+++|+.|++++|.+++. ..+..+++|+.|++++|++++. +.+..+++|+.|++++|++++..|
T Consensus 229 ~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~ 304 (347)
T 4fmz_A 229 GNNKITDLSPLANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDM 304 (347)
T ss_dssp CSSCCCCCGGGTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGH
T ss_pred cCCccCCCcchhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcCh
Confidence 9999987765 2368999999999999874 5689999999999999999864 468999999999999999999999
Q ss_pred cCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCcccc
Q 006145 313 DDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLA 356 (659)
Q Consensus 313 ~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~ 356 (659)
..+..+++|+.|++++|++++..| +..+++++.+++++|.++
T Consensus 305 ~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 305 EVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp HHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred hHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 999999999999999999998766 788999999999999875
No 118
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.95 E-value=4.7e-29 Score=261.07 Aligned_cols=169 Identities=17% Similarity=0.270 Sum_probs=136.5
Q ss_pred hcCCCCCceeccCcCceEEEEEe----cCCcEEEEEEecccCC----CchHHHHHHHHHHhCCCCCCccceeeeeeeccc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRL----KNGTFVAIRCLKMKKC----HSTRNFMHHIELISKLRHRHLVSALGHCFECYF 547 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~----~~g~~vavK~l~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~ 547 (659)
.++|...+.||+|+||.||+|+. .+|+.||||+++.... .....+.+|++++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 92 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT--- 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC---
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc---
Confidence 35688889999999999999996 4689999999975432 233568899999999999999999999976
Q ss_pred cCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEE
Q 006145 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKI 627 (659)
Q Consensus 548 ~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl 627 (659)
.+..|+||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 93 ----~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl 162 (327)
T 3a62_A 93 ----GGKLYLILEYLSGGELFMQLERE---GIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKL 162 (327)
T ss_dssp ----SSCEEEEEECCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEE
T ss_pred ----CCEEEEEEeCCCCCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEE
Confidence 46789999999999999999752 4588999999999999999999998 9999999999999999999999
Q ss_pred ccCcccccccc-ccccceecccccccCCCCC
Q 006145 628 SSYNLPLLAEN-AEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 628 ~DFGla~~~~~-~~~~~~~~gt~~y~aPE~~ 657 (659)
+|||+++.... .......+||+.|+|||+.
T Consensus 163 ~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~ 193 (327)
T 3a62_A 163 TDFGLCKESIHDGTVTHTFCGTIEYMAPEIL 193 (327)
T ss_dssp CCCSCC----------CTTSSCCTTSCHHHH
T ss_pred EeCCcccccccCCccccccCCCcCccCHhhC
Confidence 99999975432 2233456899999999975
No 119
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.95 E-value=1e-28 Score=256.64 Aligned_cols=169 Identities=18% Similarity=0.308 Sum_probs=142.7
Q ss_pred hcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCC--chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
.++|...+.||+|+||+||+|+..+|+.||||++...... ..+.+.+|++++++++||||+++++++.+ .+
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~ 92 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS-------ER 92 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECC-------SS
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEcc-------CC
Confidence 4668888999999999999999988999999999754322 23678999999999999999999999875 46
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCccc
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla 633 (659)
..++||||+++ +|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 93 ~~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 166 (311)
T 3niz_A 93 CLTLVFEFMEK-DLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLA 166 (311)
T ss_dssp CEEEEEECCSE-EHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEcCCCC-CHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCc
Confidence 78999999985 888888753 24589999999999999999999998 9999999999999999999999999999
Q ss_pred cccccc-cccceecccccccCCCCC
Q 006145 634 LLAENA-EKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 634 ~~~~~~-~~~~~~~gt~~y~aPE~~ 657 (659)
+..... .......||+.|+|||+.
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~ 191 (311)
T 3niz_A 167 RAFGIPVRSYTHEVVTLWYRAPDVL 191 (311)
T ss_dssp EETTSCCC---CCCCCCTTCCHHHH
T ss_pred eecCCCcccccCCcccCCcCCHHHh
Confidence 876432 334556899999999974
No 120
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.95 E-value=1.2e-28 Score=251.25 Aligned_cols=169 Identities=15% Similarity=0.207 Sum_probs=150.7
Q ss_pred hcCCCCCceeccCcCceEEEEEecC-CcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCce
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 554 (659)
.++|...+.||+|+||.||+|+... +..||+|++........+++.+|++++++++||||+++++++.+ .+.
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~~~ 80 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFED-------NTD 80 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------SSE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEec-------CCe
Confidence 3557888999999999999999764 78999999987666667889999999999999999999999976 567
Q ss_pred eEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceee---cCCcceEEccCc
Q 006145 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL---DQNLVAKISSYN 631 (659)
Q Consensus 555 ~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---d~~~~~kl~DFG 631 (659)
.++||||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg 154 (277)
T 3f3z_A 81 IYLVMELCTGGELFERVVHK---RVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFG 154 (277)
T ss_dssp EEEEEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEEeccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecc
Confidence 89999999999999998752 4589999999999999999999998 99999999999999 788999999999
Q ss_pred cccccccccccceecccccccCCCCC
Q 006145 632 LPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 632 la~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
++.............||+.|+|||+.
T Consensus 155 ~~~~~~~~~~~~~~~~t~~y~aPE~~ 180 (277)
T 3f3z_A 155 LAARFKPGKMMRTKVGTPYYVSPQVL 180 (277)
T ss_dssp TCEECCTTSCBCCCCSCTTTCCHHHH
T ss_pred cceeccCccchhccCCCCCccChHHh
Confidence 99877666666677899999999974
No 121
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.95 E-value=3.6e-29 Score=273.44 Aligned_cols=169 Identities=18% Similarity=0.287 Sum_probs=136.7
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccC---CCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 551 (659)
.++|...+.||+|+||.||+|+.. +|+.||||+++... ......+.+|+++++.++||||++++++|..
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~------- 219 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT------- 219 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEE-------
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEee-------
Confidence 467888999999999999999965 59999999997542 2334568899999999999999999999986
Q ss_pred CceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcC-CCCCCccccCCCCCceeecCCcceEEccC
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT-GIVPGVFSNNLKITDILLDQNLVAKISSY 630 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiHrDlk~~NILld~~~~~kl~DF 630 (659)
.+..++|||||++|+|.+++... ..+++..+..++.|+++||+|||+ . +|+||||||+|||++.++.+||+||
T Consensus 220 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DF 293 (446)
T 4ejn_A 220 HDRLCFVMEYANGGELFFHLSRE---RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDF 293 (446)
T ss_dssp TTEEEEEECCCSSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCC
T ss_pred CCEEEEEEeeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccC
Confidence 56789999999999999999752 468999999999999999999997 7 9999999999999999999999999
Q ss_pred ccccccc-cccccceecccccccCCCCC
Q 006145 631 NLPLLAE-NAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~-~~~~~~~~~gt~~y~aPE~~ 657 (659)
|+++... ........+||+.|||||++
T Consensus 294 G~a~~~~~~~~~~~~~~gt~~y~aPE~~ 321 (446)
T 4ejn_A 294 GLCKEGIKDGATMKTFCGTPEYLAPEVL 321 (446)
T ss_dssp CCCCTTCC-----CCSSSCGGGCCHHHH
T ss_pred CCceeccCCCcccccccCCccccCHhhc
Confidence 9997643 33344667899999999974
No 122
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.95 E-value=5.8e-29 Score=264.72 Aligned_cols=169 Identities=18% Similarity=0.310 Sum_probs=138.2
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCC---CchHHHHHHHHH-HhCCCCCCccceeeeeeeccccCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIEL-ISKLRHRHLVSALGHCFECYFDDS 550 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~~Ei~~-l~~l~H~niv~l~g~~~~~~~~~~ 550 (659)
.++|...+.||+|+||+||+|+.. +++.||||+++.... ...+.+.+|..+ ++.++|||||++++++.+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~------ 110 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT------ 110 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEEC------
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEe------
Confidence 356888899999999999999976 489999999976542 223457777776 577899999999999876
Q ss_pred CCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccC
Q 006145 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (659)
Q Consensus 551 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 630 (659)
.+..|+||||+++|+|.+++++. ..+++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 111 -~~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DF 183 (373)
T 2r5t_A 111 -ADKLYFVLDYINGGELFYHLQRE---RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDF 183 (373)
T ss_dssp -SSEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred -CCEEEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeC
Confidence 56799999999999999999752 4688999999999999999999998 9999999999999999999999999
Q ss_pred cccccc-ccccccceecccccccCCCCC
Q 006145 631 NLPLLA-ENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~-~~~~~~~~~~gt~~y~aPE~~ 657 (659)
|+++.. .........+||+.|||||++
T Consensus 184 G~a~~~~~~~~~~~~~~gt~~y~aPE~~ 211 (373)
T 2r5t_A 184 GLCKENIEHNSTTSTFCGTPEYLAPEVL 211 (373)
T ss_dssp CBCGGGBCCCCCCCSBSCCCCCCCHHHH
T ss_pred ccccccccCCCccccccCCccccCHHHh
Confidence 999764 333345667899999999975
No 123
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.95 E-value=1.1e-28 Score=261.93 Aligned_cols=168 Identities=18% Similarity=0.239 Sum_probs=137.3
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCce
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 554 (659)
.++|...+.||+|+||+||+|+.. +++.||||++..... ..+.+.+|+.++++++|||||++++++.+ .+.
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------~~~ 90 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILT-------PTH 90 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEEC-------SSE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEee-------CCE
Confidence 467888999999999999999976 699999999975432 34678999999999999999999999986 567
Q ss_pred eEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcc--eEEccCcc
Q 006145 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV--AKISSYNL 632 (659)
Q Consensus 555 ~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~--~kl~DFGl 632 (659)
.++||||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 91 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~ 164 (361)
T 3uc3_A 91 LAIIMEYASGGELYERICNA---GRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGY 164 (361)
T ss_dssp EEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCC
T ss_pred EEEEEEeCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCc
Confidence 89999999999999999752 4589999999999999999999998 9999999999999987765 99999999
Q ss_pred ccccccccccceecccccccCCCCC
Q 006145 633 PLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
++...........+||+.|+|||++
T Consensus 165 a~~~~~~~~~~~~~gt~~y~aPE~~ 189 (361)
T 3uc3_A 165 SKSSVLHSQPKSTVGTPAYIAPEVL 189 (361)
T ss_dssp C---------------CTTSCHHHH
T ss_pred cccccccCCCCCCcCCCCcCChhhh
Confidence 9865544455667899999999974
No 124
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.95 E-value=1e-28 Score=259.35 Aligned_cols=170 Identities=14% Similarity=0.202 Sum_probs=149.2
Q ss_pred hhcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC--------chHHHHHHHHHHhCCCCCCccceeeeeeec
Q 006145 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--------STRNFMHHIELISKLRHRHLVSALGHCFEC 545 (659)
Q Consensus 475 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~ 545 (659)
..++|...+.||+|+||.||+|+.. +++.||||+++..... ..+.+.+|++++++++||||+++++++.+
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~- 100 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN- 100 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC-
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee-
Confidence 3467888999999999999999954 5999999999765321 23468899999999999999999999975
Q ss_pred cccCCCCceeEEEEeccCCC-ChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcc
Q 006145 546 YFDDSSVSRIFLIFEYVPNG-TLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV 624 (659)
Q Consensus 546 ~~~~~~~~~~~lV~Ey~~~G-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~ 624 (659)
.+..++||||+.+| +|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.
T Consensus 101 ------~~~~~lv~e~~~~g~~l~~~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~ 168 (335)
T 3dls_A 101 ------QGFFQLVMEKHGSGLDLFAFIDRH---PRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFT 168 (335)
T ss_dssp ------SSEEEEEEECCTTSCBHHHHHHTC---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSC
T ss_pred ------CCEEEEEEEeCCCCccHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCc
Confidence 56789999999877 999999863 4699999999999999999999998 9999999999999999999
Q ss_pred eEEccCccccccccccccceecccccccCCCCC
Q 006145 625 AKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 625 ~kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
+||+|||+++...........+||+.|+|||+.
T Consensus 169 ~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~ 201 (335)
T 3dls_A 169 IKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVL 201 (335)
T ss_dssp EEECCCTTCEECCTTCCBCEECSCGGGCCHHHH
T ss_pred EEEeecccceECCCCCceeccCCCccccChhhh
Confidence 999999999887666666678899999999975
No 125
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.95 E-value=1e-28 Score=260.96 Aligned_cols=168 Identities=20% Similarity=0.303 Sum_probs=130.1
Q ss_pred hhcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCc
Q 006145 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 475 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
..++|...+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++||||++++++|.+ .+
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~-------~~ 121 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFET-------PT 121 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEEC-------SS
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEec-------CC
Confidence 3567888999999999999999976 48899999997543 34568899999999999999999999976 56
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecC---CcceEEccC
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ---NLVAKISSY 630 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~---~~~~kl~DF 630 (659)
..++||||+++|+|.+++... ..+++.++..++.|+++||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 122 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Df 195 (349)
T 2w4o_A 122 EISLVLELVTGGELFDRIVEK---GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADF 195 (349)
T ss_dssp EEEEEECCCCSCBHHHHHTTC---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCC
T ss_pred eEEEEEEeCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccC
Confidence 789999999999999999752 4589999999999999999999998 9999999999999975 889999999
Q ss_pred ccccccccccccceecccccccCCCCC
Q 006145 631 NLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
|+++...........+||+.|+|||+.
T Consensus 196 g~a~~~~~~~~~~~~~gt~~y~aPE~~ 222 (349)
T 2w4o_A 196 GLSKIVEHQVLMKTVCGTPGYCAPEIL 222 (349)
T ss_dssp C----------------CGGGSCHHHH
T ss_pred ccccccCcccccccccCCCCccCHHHh
Confidence 999877665555667899999999975
No 126
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.95 E-value=5.1e-29 Score=256.59 Aligned_cols=172 Identities=21% Similarity=0.370 Sum_probs=141.6
Q ss_pred hcCCCCCceeccCcCceEEEEEe-----cCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRL-----KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 550 (659)
.++|+..+.||+|+||+||+|++ .+++.||||++........++|.+|++++++++||||++++++|....
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 84 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG---- 84 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHH----
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC----
Confidence 35677889999999999999984 258999999997655444567999999999999999999999986522
Q ss_pred CCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccC
Q 006145 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (659)
Q Consensus 551 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 630 (659)
....++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 85 -~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Df 158 (295)
T 3ugc_A 85 -RRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDF 158 (295)
T ss_dssp -HTSCEEEEECCTTCBHHHHHHHC--GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCC
T ss_pred -CCceEEEEEeCCCCCHHHHHHhc--ccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccC
Confidence 24579999999999999999753 23589999999999999999999998 9999999999999999999999999
Q ss_pred ccccccccccc----cceecccccccCCCCC
Q 006145 631 NLPLLAENAEK----VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~~~~~----~~~~~gt~~y~aPE~~ 657 (659)
|+++....... .....++..|+|||+.
T Consensus 159 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 189 (295)
T 3ugc_A 159 GLTKVLPQDKEFFKVKEPGESPIFWYAPESL 189 (295)
T ss_dssp CSCC-------------CTTCGGGGCCHHHH
T ss_pred cccccccCCcceeeeccCCCCccceeCcHHh
Confidence 99987643321 2334577889999964
No 127
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.95 E-value=7e-29 Score=262.40 Aligned_cols=171 Identities=15% Similarity=0.245 Sum_probs=144.8
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccC-----CCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCC
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK-----CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~-----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 550 (659)
+.|...+.||+|+||+||+|+.. +|+.||||++.... ....+++.+|+++++.++|||||++++++.+
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~------ 97 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS------ 97 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEE------
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEe------
Confidence 46888899999999999999965 59999999996432 1235679999999999999999999999986
Q ss_pred CCceeEEEEeccCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcc---eE
Q 006145 551 SVSRIFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV---AK 626 (659)
Q Consensus 551 ~~~~~~lV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~---~k 626 (659)
.+..|+||||+++|+|.+++... .....+++..+..++.|+++||+|||+. +|+||||||+|||++.++. +|
T Consensus 98 -~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vk 173 (351)
T 3c0i_A 98 -DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVK 173 (351)
T ss_dssp -TTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEE
T ss_pred -CCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEE
Confidence 46789999999999999887632 1234589999999999999999999998 9999999999999986654 99
Q ss_pred EccCccccccccccc-cceecccccccCCCCC
Q 006145 627 ISSYNLPLLAENAEK-VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 627 l~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~ 657 (659)
|+|||+++....... ....+||+.|+|||+.
T Consensus 174 l~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~ 205 (351)
T 3c0i_A 174 LGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205 (351)
T ss_dssp ECCCTTCEECCTTSCBCCCCCSCGGGCCHHHH
T ss_pred EecCcceeEecCCCeeecCCcCCcCccCHHHH
Confidence 999999977654332 4567899999999975
No 128
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.95 E-value=1.2e-28 Score=259.01 Aligned_cols=171 Identities=15% Similarity=0.154 Sum_probs=137.6
Q ss_pred hcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCC--------CchHHHHHHHHHHhCCC---------CCCccce
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKC--------HSTRNFMHHIELISKLR---------HRHLVSA 538 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~--------~~~~~~~~Ei~~l~~l~---------H~niv~l 538 (659)
.++|...+.||+|+||+||+|+. +|+.||||+++.... ...+.+.+|++++++++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35577789999999999999998 689999999976532 12367899999998886 7777776
Q ss_pred eeeeeecccc-----------------------CCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHH
Q 006145 539 LGHCFECYFD-----------------------DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKG 595 (659)
Q Consensus 539 ~g~~~~~~~~-----------------------~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~ 595 (659)
.+++...... ....+..|+||||+++|++.+.+.+ ..+++..+..++.|++.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 6654321000 0014678999999999987777753 358999999999999999
Q ss_pred hhhhc-CCCCCCccccCCCCCceeecCCc--------------------ceEEccCccccccccccccceecccccccCC
Q 006145 596 IQFLH-TGIVPGVFSNNLKITDILLDQNL--------------------VAKISSYNLPLLAENAEKVGHVIPYSGSIDP 654 (659)
Q Consensus 596 L~yLH-~~~~~~iiHrDlk~~NILld~~~--------------------~~kl~DFGla~~~~~~~~~~~~~gt~~y~aP 654 (659)
|+||| +. +|+||||||+|||++.++ .+||+|||+|+..... ..+||+.||||
T Consensus 174 L~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~----~~~gt~~y~aP 246 (336)
T 2vuw_A 174 LAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG----IVVFCDVSMDE 246 (336)
T ss_dssp HHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT----EEECCCCTTCS
T ss_pred HHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC----cEEEeecccCh
Confidence 99999 87 999999999999999886 9999999999876542 45899999999
Q ss_pred CCCC
Q 006145 655 TNSA 658 (659)
Q Consensus 655 E~~~ 658 (659)
|+..
T Consensus 247 E~~~ 250 (336)
T 2vuw_A 247 DLFT 250 (336)
T ss_dssp GGGC
T ss_pred hhhc
Confidence 9863
No 129
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.95 E-value=1.3e-28 Score=264.79 Aligned_cols=173 Identities=22% Similarity=0.348 Sum_probs=149.6
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccC-CCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCce
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK-CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 554 (659)
++|...+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|++++++++||||+++++++... ....
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~-----~~~~ 83 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEET-----TTRH 83 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT-----TTCC
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccC-----CCCe
Confidence 46778899999999999999976 49999999997543 23456789999999999999999999998752 2346
Q ss_pred eEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceee----cCCcceEEccC
Q 006145 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL----DQNLVAKISSY 630 (659)
Q Consensus 555 ~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl----d~~~~~kl~DF 630 (659)
.++||||+++|+|.++++.......+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DF 160 (396)
T 4eut_A 84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160 (396)
T ss_dssp EEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCG
T ss_pred eEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecC
Confidence 799999999999999998643334599999999999999999999998 99999999999999 77888999999
Q ss_pred ccccccccccccceecccccccCCCCC
Q 006145 631 NLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
|+++............||+.|+|||+.
T Consensus 161 G~a~~~~~~~~~~~~~gt~~y~aPE~~ 187 (396)
T 4eut_A 161 GAARELEDDEQFVSLYGTEEYLHPDMY 187 (396)
T ss_dssp GGCEECCCGGGSSCSSSCCTTCCHHHH
T ss_pred CCceEccCCCccccccCCccccCHHHh
Confidence 999887666666677899999999964
No 130
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.95 E-value=5.3e-29 Score=263.90 Aligned_cols=182 Identities=22% Similarity=0.352 Sum_probs=150.2
Q ss_pred cCHHHHHHhhcCCCCCceeccCcCceEEEEEec------CCcEEEEEEecccCCC-chHHHHHHHHHHhCC-CCCCccce
Q 006145 467 FSLEELEEATNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKCH-STRNFMHHIELISKL-RHRHLVSA 538 (659)
Q Consensus 467 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~-~~~~~~~Ei~~l~~l-~H~niv~l 538 (659)
+...++....++|...+.||+|+||.||+|++. +++.||||+++..... ..+++.+|++++.++ +|||||++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 455666677889999999999999999999832 4689999999764432 235799999999999 79999999
Q ss_pred eeeeeeccccCCCCceeEEEEeccCCCChhhhhcCCCC------------------------------------------
Q 006145 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHA------------------------------------------ 576 (659)
Q Consensus 539 ~g~~~~~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~------------------------------------------ 576 (659)
+++|.+. ....++||||+++|+|.++++....
T Consensus 92 ~~~~~~~------~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (359)
T 3vhe_A 92 LGACTKP------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASS 165 (359)
T ss_dssp EEEECST------TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------
T ss_pred eeeeecC------CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccc
Confidence 9999752 3458999999999999999975321
Q ss_pred ---------------------CCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCccccc
Q 006145 577 ---------------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (659)
Q Consensus 577 ---------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~ 635 (659)
...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 242 (359)
T 3vhe_A 166 GFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARD 242 (359)
T ss_dssp ------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSC
T ss_pred ccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceee
Confidence 12289999999999999999999998 999999999999999999999999999976
Q ss_pred ccccc---ccceecccccccCCCCC
Q 006145 636 AENAE---KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 636 ~~~~~---~~~~~~gt~~y~aPE~~ 657 (659)
..... ......||+.|+|||+.
T Consensus 243 ~~~~~~~~~~~~~~~t~~y~aPE~~ 267 (359)
T 3vhe_A 243 IYKDPDYVRKGDARLPLKWMAPETI 267 (359)
T ss_dssp TTSCTTCEEC--CEECGGGCCHHHH
T ss_pred ecccccchhccccCCCceeEChhhh
Confidence 53322 23456789999999964
No 131
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.95 E-value=3.6e-28 Score=253.21 Aligned_cols=171 Identities=17% Similarity=0.331 Sum_probs=132.7
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCC-CchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
.++|...+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||+++++++.+ .+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~ 76 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHT-------EN 76 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECC-------TT
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEE-------CC
Confidence 467888999999999999999965 599999999975543 234679999999999999999999999875 46
Q ss_pred eeEEEEeccCCCChhhhhcCC---CCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccC
Q 006145 554 RIFLIFEYVPNGTLRSWISEG---HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~---~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 630 (659)
..++||||++ |+|.+++... .....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 77 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 152 (317)
T 2pmi_A 77 KLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDF 152 (317)
T ss_dssp EEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred eEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcC
Confidence 7899999998 5999988642 1224589999999999999999999998 9999999999999999999999999
Q ss_pred ccccccccc-cccceecccccccCCCCC
Q 006145 631 NLPLLAENA-EKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~~~-~~~~~~~gt~~y~aPE~~ 657 (659)
|+++..... .......||+.|+|||+.
T Consensus 153 g~~~~~~~~~~~~~~~~~t~~y~aPE~~ 180 (317)
T 2pmi_A 153 GLARAFGIPVNTFSSEVVTLWYRAPDVL 180 (317)
T ss_dssp SSCEETTSCCCCCCCCCSCCTTCCHHHH
T ss_pred ccceecCCCcccCCCCcccccccCchHh
Confidence 999766432 233556899999999975
No 132
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.95 E-value=2.7e-28 Score=250.91 Aligned_cols=168 Identities=17% Similarity=0.304 Sum_probs=143.3
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC--chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCc
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
++|...+.||+|+||+||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++.+ .+
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~ 74 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-------DK 74 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-------TT
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEe-------CC
Confidence 46788899999999999999975 5899999999755432 23678999999999999999999999986 56
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCccc
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla 633 (659)
..++||||+++ ++.+.+... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 75 ~~~lv~e~~~~-~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~ 148 (292)
T 3o0g_A 75 KLTLVFEFCDQ-DLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLA 148 (292)
T ss_dssp EEEEEEECCSE-EHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEEecCCC-CHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccc
Confidence 78999999976 666665532 24699999999999999999999998 9999999999999999999999999999
Q ss_pred cccccc-cccceecccccccCCCCC
Q 006145 634 LLAENA-EKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 634 ~~~~~~-~~~~~~~gt~~y~aPE~~ 657 (659)
+..... .......||+.|+|||+.
T Consensus 149 ~~~~~~~~~~~~~~~t~~y~aPE~~ 173 (292)
T 3o0g_A 149 RAFGIPVRCYSAEVVTLWYRPPDVL 173 (292)
T ss_dssp EECCSCCSCCCSCCSCGGGCCHHHH
T ss_pred eecCCccccccCCccccCCcChHHH
Confidence 766432 334567899999999964
No 133
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.95 E-value=1.8e-28 Score=268.78 Aligned_cols=173 Identities=16% Similarity=0.313 Sum_probs=133.7
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC--chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
.++|...+.||+|+||+||+|+.. +|+.||||++...... ..+++.+|+++|++++|||||++++++.....+ ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--~~ 129 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVE--KF 129 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTT--TC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcc--cC
Confidence 367888999999999999999965 6999999999654322 346799999999999999999999999653221 23
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
...|+||||+ +|+|.+++.. ...+++..+..++.||++||+|||+. +||||||||+|||++.++.+||+|||+
T Consensus 130 ~~~~lv~e~~-~~~L~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGl 202 (458)
T 3rp9_A 130 DELYVVLEIA-DSDFKKLFRT---PVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGL 202 (458)
T ss_dssp CCEEEEECCC-SEEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEecc-ccchhhhccc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeeccccc
Confidence 5689999998 4699999985 24699999999999999999999998 999999999999999999999999999
Q ss_pred cccccccc----------------------------ccceecccccccCCCCC
Q 006145 633 PLLAENAE----------------------------KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~~----------------------------~~~~~~gt~~y~aPE~~ 657 (659)
|+...... .....+||++|||||++
T Consensus 203 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~ 255 (458)
T 3rp9_A 203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELI 255 (458)
T ss_dssp CBCTTSCTTCCCCCC---------------------------CCCTTCCHHHH
T ss_pred chhccCccccccccccCccccccccccccccccccccccCCcccccccChHHh
Confidence 98664221 23456889999999963
No 134
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.95 E-value=1.9e-28 Score=266.55 Aligned_cols=169 Identities=19% Similarity=0.237 Sum_probs=144.7
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC--chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
.++|...+.||+|+||.||+|+.. +|+.||+|++...... ..+.+.+|++++++++|||||++++++.+ .
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-------~ 82 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE-------E 82 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEEC-------S
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEE-------C
Confidence 566888999999999999999864 6999999999765432 23568999999999999999999999976 5
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeec---CCcceEEcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD---QNLVAKISS 629 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld---~~~~~kl~D 629 (659)
+..++||||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+|||++ +++.+||+|
T Consensus 83 ~~~~lv~E~~~gg~L~~~i~~~---~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~D 156 (444)
T 3soa_A 83 GHHYLIFDLVTGGELFEDIVAR---EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLAD 156 (444)
T ss_dssp SEEEEEECCCBCCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECC
T ss_pred CEEEEEEEeCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEcc
Confidence 6789999999999999998753 4699999999999999999999998 999999999999998 457899999
Q ss_pred Ccccccccccc-ccceecccccccCCCCC
Q 006145 630 YNLPLLAENAE-KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 630 FGla~~~~~~~-~~~~~~gt~~y~aPE~~ 657 (659)
||+++...... .....+||+.|||||++
T Consensus 157 FG~a~~~~~~~~~~~~~~gt~~Y~APE~l 185 (444)
T 3soa_A 157 FGLAIEVEGEQQAWFGFAGTPGYLSPEVL 185 (444)
T ss_dssp CSSCBCCCTTCCBCCCSCSCGGGCCHHHH
T ss_pred CceeEEecCCCceeecccCCcccCCHHHh
Confidence 99997765433 33567899999999975
No 135
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.95 E-value=1.4e-28 Score=252.54 Aligned_cols=168 Identities=20% Similarity=0.310 Sum_probs=141.3
Q ss_pred cCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCC--CchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCce
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 554 (659)
++|...+.||+|+||+||+|+..+|+.||||++..... ...+.+.+|++++++++||||+++++++.+ .+.
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~ 74 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT-------KKR 74 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC-------SSC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEcc-------CCe
Confidence 46778899999999999999987899999999965432 224678999999999999999999999975 457
Q ss_pred eEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcccc
Q 006145 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (659)
Q Consensus 555 ~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~ 634 (659)
.++||||+++ +|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 75 ~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 148 (288)
T 1ob3_A 75 LVLVFEHLDQ-DLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLAR 148 (288)
T ss_dssp EEEEEECCSE-EHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHH
T ss_pred EEEEEEecCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECcccc
Confidence 8999999985 999998753 24689999999999999999999998 99999999999999999999999999997
Q ss_pred ccccc-cccceecccccccCCCCC
Q 006145 635 LAENA-EKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 635 ~~~~~-~~~~~~~gt~~y~aPE~~ 657 (659)
..... .......||+.|+|||+.
T Consensus 149 ~~~~~~~~~~~~~~t~~y~aPE~~ 172 (288)
T 1ob3_A 149 AFGIPVRKYTHEIVTLWYRAPDVL 172 (288)
T ss_dssp HHCC---------CCCTTCCHHHH
T ss_pred ccCccccccccccccccccCchhe
Confidence 65432 233556899999999975
No 136
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.95 E-value=8.8e-29 Score=253.17 Aligned_cols=170 Identities=21% Similarity=0.319 Sum_probs=143.9
Q ss_pred hhcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCce
Q 006145 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (659)
Q Consensus 475 ~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 554 (659)
..++|...+.||+|+||.||+|+..++..||||+++.... ..+++.+|++++.+++||||++++++|.+ .+.
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~~~ 93 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTK-------QRP 93 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECS-------SSS
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEec-------CCC
Confidence 3567788899999999999999998888999999976543 35779999999999999999999999975 456
Q ss_pred eEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcccc
Q 006145 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (659)
Q Consensus 555 ~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~ 634 (659)
.++||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 94 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 168 (283)
T 3gen_A 94 IFIITEYMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSR 168 (283)
T ss_dssp EEEEECCCTTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGG
T ss_pred eEEEEeccCCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccc
Confidence 89999999999999999752 24599999999999999999999998 99999999999999999999999999997
Q ss_pred cccccc--ccceecccccccCCCCC
Q 006145 635 LAENAE--KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 635 ~~~~~~--~~~~~~gt~~y~aPE~~ 657 (659)
...... ......+|+.|+|||+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~y~aPE~~ 193 (283)
T 3gen_A 169 YVLDDEYTSSVGSKFPVRWSPPEVL 193 (283)
T ss_dssp GBCCHHHHSTTSTTSCGGGCCHHHH
T ss_pred cccccccccccCCccCcccCCHHHh
Confidence 664322 12345577889999974
No 137
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.95 E-value=1.2e-28 Score=259.29 Aligned_cols=177 Identities=24% Similarity=0.385 Sum_probs=147.1
Q ss_pred HHHHhhcCCCCCceeccCcCceEEEEEec------CCcEEEEEEecccCCC-chHHHHHHHHHHhCCCCCCccceeeeee
Q 006145 471 ELEEATNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCF 543 (659)
Q Consensus 471 ~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~ 543 (659)
++....++|...+.||+|+||.||+|+.. +++.||||.++..... ..++|.+|++++++++||||++++++|.
T Consensus 41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 120 (343)
T 1luf_A 41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA 120 (343)
T ss_dssp HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 33445678999999999999999999975 3589999999755432 2457999999999999999999999997
Q ss_pred eccccCCCCceeEEEEeccCCCChhhhhcCCCC---------------------CCCCCHHHHHHHHHHHHHHhhhhcCC
Q 006145 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHA---------------------HQSLTWTQRISAAIGVAKGIQFLHTG 602 (659)
Q Consensus 544 ~~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~~L~yLH~~ 602 (659)
+ .+..++||||+++|+|.++++.... ...+++.++..++.|+++||+|||+.
T Consensus 121 ~-------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~ 193 (343)
T 1luf_A 121 V-------GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER 193 (343)
T ss_dssp S-------SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred c-------CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 5 4568999999999999999975311 15699999999999999999999998
Q ss_pred CCCCccccCCCCCceeecCCcceEEccCcccccccccc---ccceecccccccCCCCC
Q 006145 603 IVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 603 ~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~ 657 (659)
+|+||||||+||++++++.+||+|||+++...... ......+|+.|+|||+.
T Consensus 194 ---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~ 248 (343)
T 1luf_A 194 ---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESI 248 (343)
T ss_dssp ---TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHH
T ss_pred ---CeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhh
Confidence 99999999999999999999999999997653322 22456788999999964
No 138
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.95 E-value=1.3e-28 Score=269.60 Aligned_cols=172 Identities=20% Similarity=0.335 Sum_probs=147.2
Q ss_pred HHhhcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 473 EEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 473 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
+...++|...+.||+|+||.||+|++.++..||||+++... ...++|.+|+++|++++|||||++++++..
T Consensus 184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~-------- 254 (454)
T 1qcf_A 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-------- 254 (454)
T ss_dssp BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECS--------
T ss_pred eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeC--------
Confidence 34566788889999999999999999888999999997644 346789999999999999999999999853
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
+..++|||||++|+|.++++.. ....+++..+..++.|||+||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 255 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~ 330 (454)
T 1qcf_A 255 EPIYIITEFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGL 330 (454)
T ss_dssp SSCEEEECCCTTCBHHHHHHSH-HHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTG
T ss_pred CccEEEEeecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCC
Confidence 4579999999999999999852 123588999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccc--cceecccccccCCCCC
Q 006145 633 PLLAENAEK--VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~~~--~~~~~gt~~y~aPE~~ 657 (659)
++....... .....++..|+|||+.
T Consensus 331 a~~~~~~~~~~~~~~~~~~~y~aPE~~ 357 (454)
T 1qcf_A 331 ARVIEDNEYTAREGAKFPIKWTAPEAI 357 (454)
T ss_dssp GGGBCCHHHHTTCSSSSCGGGSCHHHH
T ss_pred ceEcCCCceeccCCCcccccccCHHHh
Confidence 987643321 2334567899999964
No 139
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.95 E-value=2.8e-28 Score=270.34 Aligned_cols=171 Identities=19% Similarity=0.285 Sum_probs=147.8
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccC---CCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+ .
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-------~ 257 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET-------K 257 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------S
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEee-------C
Confidence 56788889999999999999975 59999999996542 2344678999999999999999999999875 5
Q ss_pred ceeEEEEeccCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGH-AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 631 (659)
+..|+||||+++|+|.+++.... ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 258 ~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFG 334 (543)
T 3c4z_A 258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLG 334 (543)
T ss_dssp SEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecc
Confidence 67899999999999999987532 134699999999999999999999998 99999999999999999999999999
Q ss_pred cccccccccc-cceecccccccCCCCC
Q 006145 632 LPLLAENAEK-VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 632 la~~~~~~~~-~~~~~gt~~y~aPE~~ 657 (659)
+++....... ....+||+.|||||++
T Consensus 335 la~~~~~~~~~~~~~~GT~~Y~APE~l 361 (543)
T 3c4z_A 335 LAVELKAGQTKTKGYAGTPGFMAPELL 361 (543)
T ss_dssp TCEECCTTCCCBCCCCSCTTTSCHHHH
T ss_pred eeeeccCCCcccccccCCccccChhhh
Confidence 9987654333 3446899999999975
No 140
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.95 E-value=7.6e-27 Score=256.48 Aligned_cols=254 Identities=23% Similarity=0.268 Sum_probs=125.6
Q ss_pred CCEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccC
Q 006145 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (659)
Q Consensus 74 ~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (659)
.+++.|++++|.+.+. ++ +.++++|++|+|++|.+.+..+ ++++++|++|++++|.+++..+ +.+
T Consensus 68 ~~L~~L~Ls~n~l~~~----------~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~ 132 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDI----------TP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKN 132 (466)
T ss_dssp TTCCEEECCSSCCCCC----------GG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTT
T ss_pred cCCCEEECCCCccCCc----------hh-hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcC
Confidence 4677888887766533 12 5566777777777777765544 6677777777777777664422 666
Q ss_pred CCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEeccccccccCCCCCCCCCcCCEEEc
Q 006145 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDL 233 (659)
Q Consensus 154 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L 233 (659)
+++|++|++++|.+.+ +| .++.+++|+.|+++ |.+.+.. .+.++++|+.|++++|.+++. +.+..+++|++|++
T Consensus 133 l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l 206 (466)
T 1o6v_A 133 LTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI-SVLAKLTNLESLIA 206 (466)
T ss_dssp CTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEEC
T ss_pred CCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC-hhhccCCCCCEEEe
Confidence 7777777777776654 22 24444444444443 2222211 144455555555555554432 23444455555555
Q ss_pred ccCCCCCCCCC-CCcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCC
Q 006145 234 ENNALGPQFPK-VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLF 312 (659)
Q Consensus 234 ~~N~l~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 312 (659)
++|.+++..|. .+++|+.|++++|++++. ..+..+++|+.|++++|.+++..| +..+++|+.|++++|++++..+
T Consensus 207 ~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~ 282 (466)
T 1o6v_A 207 TNNQISDITPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP 282 (466)
T ss_dssp CSSCCCCCGGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG
T ss_pred cCCcccccccccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc
Confidence 55554443331 134444444444444332 233444444444444444443322 4444444444444444443222
Q ss_pred cCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCcccc
Q 006145 313 DDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLA 356 (659)
Q Consensus 313 ~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~ 356 (659)
+..+++|+.|++++|++++..| +..+++++.+++++|.++
T Consensus 283 --~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~ 322 (466)
T 1o6v_A 283 --LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNIS 322 (466)
T ss_dssp --GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCS
T ss_pred --ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCC
Confidence 3344444444444444443222 333444444444444443
No 141
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.95 E-value=2.2e-28 Score=248.06 Aligned_cols=169 Identities=21% Similarity=0.324 Sum_probs=146.0
Q ss_pred hcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCcee
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~ 555 (659)
.++|...+.||+|+||.||+|+..++..||||+++.... ..+++.+|++++.+++||||+++++++.+ ....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~~~~ 78 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSK-------EYPI 78 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-------SSSE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEcc-------CCce
Confidence 456778899999999999999998888999999975543 35679999999999999999999999975 4568
Q ss_pred EEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCccccc
Q 006145 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (659)
Q Consensus 556 ~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~ 635 (659)
++||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 79 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~ 153 (268)
T 3sxs_A 79 YIVTEYISNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRY 153 (268)
T ss_dssp EEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEE
T ss_pred EEEEEccCCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCcccee
Confidence 9999999999999999752 23589999999999999999999998 999999999999999999999999999976
Q ss_pred cccccc--cceecccccccCCCCC
Q 006145 636 AENAEK--VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 636 ~~~~~~--~~~~~gt~~y~aPE~~ 657 (659)
...... .....+|+.|+|||+.
T Consensus 154 ~~~~~~~~~~~~~~~~~y~aPE~~ 177 (268)
T 3sxs_A 154 VLDDQYVSSVGTKFPVKWSAPEVF 177 (268)
T ss_dssp CCTTCEEECCSCCCCGGGCCHHHH
T ss_pred cchhhhhcccCCCcCcccCCHHHH
Confidence 644322 2345567789999974
No 142
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=5.5e-27 Score=240.28 Aligned_cols=221 Identities=24% Similarity=0.246 Sum_probs=156.7
Q ss_pred CEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCC
Q 006145 110 KVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNN 189 (659)
Q Consensus 110 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N 189 (659)
+.++.++++++. +|..+ .++|+.|+|++|.+++..+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|
T Consensus 14 ~~~~c~~~~l~~-ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQA-VPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCSS-CCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCccc-CCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 577888888765 34433 468999999999998877778889999999999999998888888999999999999999
Q ss_pred c-CCccCCcccCCCCCCcEEeccccccccCCCC-CCCCCcCCEEEcccCCCCCCCCCC---CcccceEecCCCcCCccCc
Q 006145 190 M-FNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKV---GKKLVTMILSKNKFRSAIP 264 (659)
Q Consensus 190 ~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p 264 (659)
. +....|..|..+++|++|++++|.+++..|. +.++++|++|++++|.+++..+.. +++|+.|++++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 7 7766688888899999999999998887665 788888888888888776554432 3455555555555555444
Q ss_pred hhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcc
Q 006145 265 AEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTG 333 (659)
Q Consensus 265 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g 333 (659)
..+..+++|+.|+|++|.+++..|..+..+++|+.|++++|++++..+..+..+++|+.|++++|.++.
T Consensus 171 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred HHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccC
Confidence 445555555555555555555555555555555555555555555444445555555555555555553
No 143
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.95 E-value=2.2e-28 Score=270.45 Aligned_cols=171 Identities=19% Similarity=0.356 Sum_probs=147.1
Q ss_pred hhcCCCCCceeccCcCceEEEEEecC-CcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCc
Q 006145 475 ATNNFDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 475 ~~~~~~~~~~ig~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
...+|...+.||+|+||.||+|++.. +..||||.++... ...++|.+|+++|++++|||||+++++|.. .+
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-------~~ 289 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-------EP 289 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-------SS
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEec-------CC
Confidence 35567788999999999999999775 8899999997544 346789999999999999999999999975 45
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCccc
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla 633 (659)
..++|||||++|+|.++++.. ....+++..+..++.||++||+|||+. +|+||||||+|||+++++.+||+|||++
T Consensus 290 ~~~lv~E~~~~g~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 365 (495)
T 1opk_A 290 PFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLS 365 (495)
T ss_dssp SCEEEEECCTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCE
T ss_pred cEEEEEEccCCCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccc
Confidence 689999999999999999853 235689999999999999999999998 9999999999999999999999999999
Q ss_pred cccccccc--cceecccccccCCCCC
Q 006145 634 LLAENAEK--VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 634 ~~~~~~~~--~~~~~gt~~y~aPE~~ 657 (659)
+....... .....++..|+|||++
T Consensus 366 ~~~~~~~~~~~~~~~~~~~y~aPE~~ 391 (495)
T 1opk_A 366 RLMTGDTYTAHAGAKFPIKWTAPESL 391 (495)
T ss_dssp ECCTTCCEECCTTCCCCGGGCCHHHH
T ss_pred eeccCCceeecCCCcCCcceeCHhHH
Confidence 87644322 2334567899999964
No 144
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.95 E-value=4.1e-28 Score=247.15 Aligned_cols=167 Identities=18% Similarity=0.290 Sum_probs=126.3
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCC---CchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
++|...+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+ .
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~ 85 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS-------K 85 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------S
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEec-------C
Confidence 57889999999999999999964 699999999975432 234579999999999999999999999975 4
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
+..++||||+ +|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 86 ~~~~lv~e~~-~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~ 158 (275)
T 2eue_A 86 DEIIMVIEYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGL 158 (275)
T ss_dssp SCEEEEEECC-CEEHHHHHHTS---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSC
T ss_pred CeEEEEehhc-CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeeccc
Confidence 5689999999 67888888752 4699999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccceecccccccCCCCC
Q 006145 633 PLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
++...........+||+.|+|||+.
T Consensus 159 ~~~~~~~~~~~~~~~t~~y~aPE~~ 183 (275)
T 2eue_A 159 SNIMTDGNFLKTSCGSPNYAAPEVI 183 (275)
T ss_dssp C---------------CTTCCHHHH
T ss_pred ceeccCcccccCCCCCcCcCCceee
Confidence 9877665556677899999999975
No 145
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.95 E-value=9.6e-29 Score=255.15 Aligned_cols=167 Identities=20% Similarity=0.377 Sum_probs=130.5
Q ss_pred cCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhC--CCCCCccceeeeeeeccccCCCCce
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISK--LRHRHLVSALGHCFECYFDDSSVSR 554 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~--l~H~niv~l~g~~~~~~~~~~~~~~ 554 (659)
++|...+.||+|+||.||+|+.. |+.||||++... ..+++.+|.+++.. ++||||+++++++..... ....
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~---~~~~ 75 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNG---TWTQ 75 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECS---SSEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCC---ccce
Confidence 57889999999999999999875 899999998643 34678889999888 789999999999976321 1236
Q ss_pred eEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhc--------CCCCCCccccCCCCCceeecCCcceE
Q 006145 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH--------TGIVPGVFSNNLKITDILLDQNLVAK 626 (659)
Q Consensus 555 ~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~iiHrDlk~~NILld~~~~~k 626 (659)
.++||||+++|+|.+++++ ..+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+|
T Consensus 76 ~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~k 148 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCC 148 (303)
T ss_dssp EEEEEECCTTCCHHHHHHH----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-
T ss_pred eEEEEeccCCCCHHHHHhc----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEE
Confidence 8999999999999999975 35888899999999999999999 65 999999999999999999999
Q ss_pred EccCcccccccccccc-----ceecccccccCCCCC
Q 006145 627 ISSYNLPLLAENAEKV-----GHVIPYSGSIDPTNS 657 (659)
Q Consensus 627 l~DFGla~~~~~~~~~-----~~~~gt~~y~aPE~~ 657 (659)
|+|||+++........ ....||+.|+|||+.
T Consensus 149 l~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 184 (303)
T 3gxj_A 149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 184 (303)
T ss_dssp BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHH
T ss_pred EeecCcceeccCCCcccccccCCCCcCccccCHhhh
Confidence 9999999766443322 344799999999975
No 146
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.95 E-value=1e-28 Score=263.67 Aligned_cols=171 Identities=18% Similarity=0.343 Sum_probs=144.0
Q ss_pred hhcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC-chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 475 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
..++|...+.||+|+||.||+|+.. +++.||||.++..... ..++|.+|+++|++++|||||+++|+|.. .
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------~ 184 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-------K 184 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECS-------S
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEec-------C
Confidence 3466778899999999999999986 6999999999754322 23468999999999999999999999975 4
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
+..++||||+++|+|.++++.. ...+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 185 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~ 259 (377)
T 3cbl_A 185 QPIYIVMELVQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGM 259 (377)
T ss_dssp SSCEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGG
T ss_pred CCcEEEEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCC
Confidence 5689999999999999999752 23589999999999999999999998 999999999999999999999999999
Q ss_pred cccccccccc---ceecccccccCCCCC
Q 006145 633 PLLAENAEKV---GHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~~~~---~~~~gt~~y~aPE~~ 657 (659)
++........ ....++..|+|||+.
T Consensus 260 s~~~~~~~~~~~~~~~~~~~~y~aPE~~ 287 (377)
T 3cbl_A 260 SREEADGVYAASGGLRQVPVKWTAPEAL 287 (377)
T ss_dssp CEECTTSEEECCSSCCEEEGGGSCHHHH
T ss_pred ceecCCCceeecCCCCCCCcCcCCHhHh
Confidence 9765432211 223457789999964
No 147
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.95 E-value=4.3e-28 Score=257.33 Aligned_cols=182 Identities=18% Similarity=0.254 Sum_probs=145.5
Q ss_pred CHHHHHHhhcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCCc-----------hHHHHHHHHHHhCCCCCCcc
Q 006145 468 SLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHS-----------TRNFMHHIELISKLRHRHLV 536 (659)
Q Consensus 468 ~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~-----------~~~~~~Ei~~l~~l~H~niv 536 (659)
..+++....++|...+.||+|+||.||+|+..+|+.||||++....... .+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 4578888899999999999999999999998889999999996543211 26799999999999999999
Q ss_pred ceeeeeeeccccCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCc
Q 006145 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITD 616 (659)
Q Consensus 537 ~l~g~~~~~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~N 616 (659)
++++++..... ......++||||++ |+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|
T Consensus 93 ~~~~~~~~~~~--~~~~~~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~N 164 (362)
T 3pg1_A 93 GLRDIFVHFEE--PAMHKLYLVTELMR-TDLAQVIHDQ--RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGN 164 (362)
T ss_dssp CCSEEEEECCT--TTCCEEEEEEECCS-EEHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGG
T ss_pred ceeeeEEeccC--CCcceEEEEEccCC-CCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHH
Confidence 99999865321 22456899999998 6999888753 34699999999999999999999998 99999999999
Q ss_pred eeecCCcceEEccCccccccccccccceecccccccCCCCC
Q 006145 617 ILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 617 ILld~~~~~kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
|+++.++.+||+|||+++............||+.|+|||+.
T Consensus 165 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~ 205 (362)
T 3pg1_A 165 ILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELV 205 (362)
T ss_dssp EEECTTCCEEECCTTC---------------CGGGCCHHHH
T ss_pred EEEcCCCCEEEEecCcccccccccccceecccceecCcHHh
Confidence 99999999999999999876655556677899999999964
No 148
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.95 E-value=4.2e-28 Score=253.10 Aligned_cols=169 Identities=18% Similarity=0.298 Sum_probs=148.4
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC------chHHHHHHHHHHhCCCCCCccceeeeeeecccc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH------STRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 548 (659)
.++|...+.||+|+||.||+|+.. +|+.||||.++..... ..+++.+|++++++++||||+++++++.+
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 86 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN---- 86 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC----
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEec----
Confidence 345788899999999999999976 5999999999754322 24679999999999999999999999975
Q ss_pred CCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCc----c
Q 006145 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL----V 624 (659)
Q Consensus 549 ~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~----~ 624 (659)
.+..++||||+++|+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||++++++ .
T Consensus 87 ---~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~ 157 (321)
T 2a2a_A 87 ---RTDVVLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPH 157 (321)
T ss_dssp ---SSEEEEEECCCCSCBHHHHHHT---CSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCC
T ss_pred ---CCEEEEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCC
Confidence 5678999999999999999985 24689999999999999999999998 999999999999999887 7
Q ss_pred eEEccCccccccccccccceecccccccCCCCC
Q 006145 625 AKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 625 ~kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
+||+|||+++............||+.|+|||+.
T Consensus 158 ~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~ 190 (321)
T 2a2a_A 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190 (321)
T ss_dssp EEECCCTTCEECCTTCCCCCCCSCGGGCCHHHH
T ss_pred EEEccCccceecCccccccccCCCCCccCcccc
Confidence 999999999877665555667899999999974
No 149
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.95 E-value=1.2e-28 Score=255.91 Aligned_cols=173 Identities=16% Similarity=0.283 Sum_probs=138.7
Q ss_pred hcCCCCCceeccCcCceEEEEEe-cCCcEEEEEEecccCCCc---hHHHHHHHHHHhCCCCCCccceeeeeeeccccCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHS---TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~---~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 551 (659)
.++|...+.||+|+||.||+|+. .+++.||||+++...... .+.|.+|++++++++||||+++++++..... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~---~ 87 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP---A 87 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEET---T
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCC---C
Confidence 45688889999999999999996 469999999997654332 2468999999999999999999999875321 1
Q ss_pred CceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCc
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 631 (659)
....|+||||+++|+|.++++.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 88 ~~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 161 (311)
T 3ork_A 88 GPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFG 161 (311)
T ss_dssp EEEEEEEEECCCEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCS
T ss_pred CcccEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeecc
Confidence 22459999999999999999752 4689999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccc----ccceecccccccCCCCC
Q 006145 632 LPLLAENAE----KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 632 la~~~~~~~----~~~~~~gt~~y~aPE~~ 657 (659)
+++...... ......||+.|+|||+.
T Consensus 162 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 191 (311)
T 3ork_A 162 IARAIADSGNSVTQTAAVIGTAQYLSPEQA 191 (311)
T ss_dssp CC------------------CCTTCCHHHH
T ss_pred CcccccccccccccccccCcCcccCCHHHh
Confidence 997654322 22446799999999974
No 150
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.95 E-value=6.7e-28 Score=249.92 Aligned_cols=176 Identities=21% Similarity=0.355 Sum_probs=144.9
Q ss_pred hhcCCCCCceeccCcCceEEEEEe-cCCcEEEEEEecccCC-----CchHHHHHHHHHHhCCC---CCCccceeeeeeec
Q 006145 475 ATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC-----HSTRNFMHHIELISKLR---HRHLVSALGHCFEC 545 (659)
Q Consensus 475 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-----~~~~~~~~Ei~~l~~l~---H~niv~l~g~~~~~ 545 (659)
..++|...+.||+|+||+||+|+. .+|+.||||++..... .....+.+|++++++++ ||||++++++|...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 357899999999999999999996 4699999999974332 12356778888877765 99999999999763
Q ss_pred cccCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcce
Q 006145 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVA 625 (659)
Q Consensus 546 ~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~ 625 (659)
..+ .....++||||+. |+|.+++.... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+
T Consensus 87 ~~~--~~~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 159 (308)
T 3g33_A 87 RTD--REIKVTLVFEHVD-QDLRTYLDKAP-PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTV 159 (308)
T ss_dssp CSS--SEEEEEEEEECCC-CBHHHHHHTCC-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCE
T ss_pred CCC--CceeEEEEehhhh-cCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCE
Confidence 211 1225799999997 59999998632 23499999999999999999999998 99999999999999999999
Q ss_pred EEccCccccccccccccceecccccccCCCCC
Q 006145 626 KISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 626 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
||+|||+++...........+||+.|+|||+.
T Consensus 160 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~ 191 (308)
T 3g33_A 160 KLADFGLARIYSYQMALTPVVVTLWYRAPEVL 191 (308)
T ss_dssp EECSCSCTTTSTTCCCSGGGGCCCSSCCHHHH
T ss_pred EEeeCccccccCCCcccCCccccccccCchHH
Confidence 99999999877666666778899999999974
No 151
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.95 E-value=4e-28 Score=265.23 Aligned_cols=168 Identities=20% Similarity=0.386 Sum_probs=142.6
Q ss_pred hhcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCce
Q 006145 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (659)
Q Consensus 475 ~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 554 (659)
..++|...+.||+|+||.||+|++. |+.||||+++... ..++|.+|+++|++++|||||+++++|... ...
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~ 261 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEE------KGG 261 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECT------TSC
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcC------CCc
Confidence 3466778899999999999999985 7899999997643 457899999999999999999999998751 336
Q ss_pred eEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcccc
Q 006145 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (659)
Q Consensus 555 ~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~ 634 (659)
.++|||||++|+|.++++.. ....+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 262 ~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 337 (450)
T 1k9a_A 262 LYIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK 337 (450)
T ss_dssp EEEEEECCTTCBHHHHHHHH-CTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred eEEEEEecCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcc
Confidence 89999999999999999853 223579999999999999999999998 99999999999999999999999999998
Q ss_pred ccccccccceecccccccCCCCC
Q 006145 635 LAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 635 ~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
..... .....++..|+|||+.
T Consensus 338 ~~~~~--~~~~~~~~~y~aPE~~ 358 (450)
T 1k9a_A 338 EASST--QDTGKLPVKWTAPEAL 358 (450)
T ss_dssp ECC--------CCCTTTSCHHHH
T ss_pred ccccc--ccCCCCCcceeCHHHh
Confidence 55332 2234678899999974
No 152
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.95 E-value=3.4e-28 Score=249.29 Aligned_cols=171 Identities=16% Similarity=0.228 Sum_probs=141.1
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCC-CchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCce
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 554 (659)
++|...+.||+|+||.||+|+.. ++..||+|++..... ...+++.+|++++++++||||+++++++.+ ...
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~~ 94 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFED-------YHN 94 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------SSE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheec-------CCe
Confidence 45777899999999999999965 589999999976543 345789999999999999999999999975 567
Q ss_pred eEEEEeccCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeec---CCcceEEccC
Q 006145 555 IFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD---QNLVAKISSY 630 (659)
Q Consensus 555 ~~lV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld---~~~~~kl~DF 630 (659)
.++||||+++|+|.+++... .....+++..+..++.|+++||+|||+. +|+||||||+||+++ .++.+||+||
T Consensus 95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Df 171 (285)
T 3is5_A 95 MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDF 171 (285)
T ss_dssp EEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCC
T ss_pred EEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEee
Confidence 89999999999999988632 1125699999999999999999999998 999999999999994 5688999999
Q ss_pred ccccccccccccceecccccccCCCCC
Q 006145 631 NLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
|+++............||+.|+|||+.
T Consensus 172 g~a~~~~~~~~~~~~~~t~~y~aPE~~ 198 (285)
T 3is5_A 172 GLAELFKSDEHSTNAAGTALYMAPEVF 198 (285)
T ss_dssp CCCCC----------CTTGGGCCHHHH
T ss_pred ecceecCCcccCcCcccccCcCChHHh
Confidence 999877665556678899999999974
No 153
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.95 E-value=1e-27 Score=250.65 Aligned_cols=161 Identities=17% Similarity=0.192 Sum_probs=124.4
Q ss_pred CceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCCC-CCCccceeeeeeeccccCCCCceeEEEE
Q 006145 482 SAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDDSSVSRIFLIF 559 (659)
Q Consensus 482 ~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~~~~~~~lV~ 559 (659)
.+.||+|+||.||+|+.. +|+.||||++... ....+.+|++++..++ ||||+++++++.+ ....++||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~-------~~~~~lv~ 85 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHD-------QLHTFLVM 85 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-------SSEEEEEE
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEc-------CCEEEEEE
Confidence 478999999999999975 5899999999643 3467889999999997 9999999999976 56789999
Q ss_pred eccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCc---ceEEccCcccccc
Q 006145 560 EYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL---VAKISSYNLPLLA 636 (659)
Q Consensus 560 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~---~~kl~DFGla~~~ 636 (659)
||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++ .+||+|||+++..
T Consensus 86 e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 159 (325)
T 3kn6_A 86 ELLNGGELFERIKKK---KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLK 159 (325)
T ss_dssp CCCCSCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEEC
T ss_pred EccCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceec
Confidence 999999999999863 4699999999999999999999998 999999999999998665 8999999999765
Q ss_pred ccc-cccceecccccccCCCCCC
Q 006145 637 ENA-EKVGHVIPYSGSIDPTNSA 658 (659)
Q Consensus 637 ~~~-~~~~~~~gt~~y~aPE~~~ 658 (659)
... ......+||+.|+|||+..
T Consensus 160 ~~~~~~~~~~~~t~~y~aPE~~~ 182 (325)
T 3kn6_A 160 PPDNQPLKTPCFTLHYAAPELLN 182 (325)
T ss_dssp CC---------------------
T ss_pred CCCCCcccccCCCcCccCHHHhc
Confidence 433 3345678899999999863
No 154
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.95 E-value=1.5e-26 Score=254.08 Aligned_cols=257 Identities=23% Similarity=0.249 Sum_probs=221.0
Q ss_pred CCEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccC
Q 006145 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (659)
Q Consensus 74 ~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (659)
.+++.|++.++.+.. +| .+..+++|++|+|++|.+++..+ +.++++|++|++++|.+++..| +.+
T Consensus 46 ~~l~~L~l~~~~i~~-l~----------~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~ 110 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-ID----------GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LAN 110 (466)
T ss_dssp HTCCEEECCSSCCCC-CT----------TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTT
T ss_pred ccccEEecCCCCCcc-Cc----------chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcC
Confidence 468899998877542 22 36789999999999999988655 9999999999999999997655 999
Q ss_pred CCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEeccccccccCCCCCCCCCcCCEEEc
Q 006145 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDL 233 (659)
Q Consensus 154 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L 233 (659)
+++|++|+|++|.+++. |. +..+++|++|++++|.+++ +| .++.+++|+.|+++ |.+.+. +.+.++++|++|++
T Consensus 111 l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~-~~~~~l~~L~~L~l 184 (466)
T 1o6v_A 111 LTNLTGLTLFNNQITDI-DP-LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDL-KPLANLTTLERLDI 184 (466)
T ss_dssp CTTCCEEECCSSCCCCC-GG-GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCC-GGGTTCTTCCEEEC
T ss_pred CCCCCEEECCCCCCCCC-hH-HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCc-hhhccCCCCCEEEC
Confidence 99999999999999865 43 9999999999999999986 44 58999999999997 556554 44999999999999
Q ss_pred ccCCCCCCCCC-CCcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCC
Q 006145 234 ENNALGPQFPK-VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLF 312 (659)
Q Consensus 234 ~~N~l~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 312 (659)
++|.+++...- .+++|+.|++++|.+++..| ++.+++|+.|++++|++++. ..+..+++|+.|++++|.+++..+
T Consensus 185 ~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~ 260 (466)
T 1o6v_A 185 SSNKVSDISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP 260 (466)
T ss_dssp CSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred cCCcCCCChhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh
Confidence 99999865322 25899999999999998766 78899999999999999863 468899999999999999998765
Q ss_pred cCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCccccCCC
Q 006145 313 DDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAGN 359 (659)
Q Consensus 313 ~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~~~~ 359 (659)
+..+++|+.|++++|.+++..| +..+++++.+++++|.+++..
T Consensus 261 --~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~ 303 (466)
T 1o6v_A 261 --LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDIS 303 (466)
T ss_dssp --GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCG
T ss_pred --hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCch
Confidence 8899999999999999997544 788999999999999988643
No 155
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.95 E-value=3.9e-28 Score=254.31 Aligned_cols=167 Identities=13% Similarity=0.170 Sum_probs=143.5
Q ss_pred hcCCCCCceeccCcCceEEEEEe-cCCcEEEEEEecccCCCchHHHHHHHHHHhCC-CCCCccceeeeeeeccccCCCCc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
.++|...+.||+|+||.||+|+. .+|+.||||.+.... ..+++.+|+++++++ +||||+++++++.. .+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-------~~ 78 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPC-------GK 78 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEE-------TT
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEec-------CC
Confidence 35688889999999999999996 469999999987543 234689999999999 89999999999876 45
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcc-----eEEc
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV-----AKIS 628 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~-----~kl~ 628 (659)
..++||||+ +|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++. +||+
T Consensus 79 ~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~ 152 (330)
T 2izr_A 79 YNAMVLELL-GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHII 152 (330)
T ss_dssp EEEEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEEC
T ss_pred ccEEEEEeC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEE
Confidence 789999999 99999999853 24699999999999999999999998 9999999999999999887 9999
Q ss_pred cCccccccccccc--------cceecccccccCCCCC
Q 006145 629 SYNLPLLAENAEK--------VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 629 DFGla~~~~~~~~--------~~~~~gt~~y~aPE~~ 657 (659)
|||+++....... ....+||+.|+|||+.
T Consensus 153 DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 189 (330)
T 2izr_A 153 DFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTH 189 (330)
T ss_dssp CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHH
T ss_pred EcccceeeecCCCCccccccccCCcCCCccccChHHH
Confidence 9999986543222 2467899999999975
No 156
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.95 E-value=3.7e-28 Score=266.19 Aligned_cols=172 Identities=17% Similarity=0.203 Sum_probs=138.9
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCC--CchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
.++|...+.||+|+||+||+|+.. +|+.||||++..... ...+++.+|+++++.++|||||++++++...... ...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~-~~~ 139 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEF 139 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCST-TTC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcc-ccC
Confidence 467888999999999999999865 599999999975422 2346789999999999999999999999652210 123
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
...|+|||||++ +|.+.+.. .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred CeEEEEEeCCCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 568999999976 57777653 489999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccceecccccccCCCCC
Q 006145 633 PLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
|+...........+||+.|+|||++
T Consensus 211 a~~~~~~~~~~~~~gt~~y~aPE~~ 235 (464)
T 3ttj_A 211 ARTAGTSFMMTPYVVTRYYRAPEVI 235 (464)
T ss_dssp C-----CCCC----CCCTTCCHHHH
T ss_pred eeecCCCcccCCCcccccccCHHHH
Confidence 9887766666778999999999975
No 157
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.95 E-value=9.7e-28 Score=249.48 Aligned_cols=168 Identities=18% Similarity=0.284 Sum_probs=139.1
Q ss_pred cCCCC-CceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCC-CCCCccceeeeeeeccccCCCCc
Q 006145 477 NNFDT-SAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 477 ~~~~~-~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
+.|.. .+.||+|+||.||+|+.. +++.||||++........+++.+|++++.++ +||||+++++++.+ .+
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~-------~~ 84 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEE-------ED 84 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-------TT
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEee-------CC
Confidence 45666 378999999999999954 6999999999766555567899999999885 79999999999986 46
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcc---eEEccC
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV---AKISSY 630 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~---~kl~DF 630 (659)
..++||||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Df 158 (316)
T 2ac3_A 85 RFYLVFEKMRGGSILSHIHKR---RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDF 158 (316)
T ss_dssp EEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCT
T ss_pred EEEEEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEc
Confidence 789999999999999999752 4689999999999999999999998 9999999999999998765 999999
Q ss_pred ccccccccc--------cccceecccccccCCCCC
Q 006145 631 NLPLLAENA--------EKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~~~--------~~~~~~~gt~~y~aPE~~ 657 (659)
|+++..... ......+||+.|+|||+.
T Consensus 159 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 193 (316)
T 2ac3_A 159 DLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193 (316)
T ss_dssp TCCC-------------------CCSGGGCCHHHH
T ss_pred cCccccccCCccccccccccccccCCcCccChHHh
Confidence 999755321 112345699999999974
No 158
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.95 E-value=1.1e-27 Score=248.30 Aligned_cols=167 Identities=20% Similarity=0.349 Sum_probs=139.2
Q ss_pred hcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCC--chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
.++|...+.||+|+||.||+|+.. ..+|||.++..... ..+.|.+|++++++++||||+++++++.. +
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--------~ 104 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK--------D 104 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--------S
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc--------C
Confidence 467888899999999999999864 36999998764432 23579999999999999999999998753 4
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCccc
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla 633 (659)
..++||||+++|+|.++++.. ...+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 105 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a 179 (307)
T 3lb7_A 105 NLAIVTQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLA 179 (307)
T ss_dssp SCEEEEECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSS
T ss_pred cEEEEEecCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCc
Confidence 579999999999999999743 35699999999999999999999998 9999999999999999999999999999
Q ss_pred ccccc---ccccceecccccccCCCCC
Q 006145 634 LLAEN---AEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 634 ~~~~~---~~~~~~~~gt~~y~aPE~~ 657 (659)
+.... ........||+.|+|||+.
T Consensus 180 ~~~~~~~~~~~~~~~~gt~~y~aPE~~ 206 (307)
T 3lb7_A 180 TVKSRWSGSQQVEQPTGSVLWMAPEVI 206 (307)
T ss_dssp CC------------CCCCTTSCCHHHH
T ss_pred eecccccccccccCCCCCcceECccee
Confidence 75532 2233456899999999974
No 159
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.95 E-value=5.3e-28 Score=276.48 Aligned_cols=171 Identities=19% Similarity=0.282 Sum_probs=147.8
Q ss_pred hhcCCCCCceeccCcCceEEEEEec-CCcEEEEEEeccc---CCCchHHHHHHHHHHhCC-CCCCccceeeeeeeccccC
Q 006145 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMK---KCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDD 549 (659)
Q Consensus 475 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~ 549 (659)
..++|...+.||+|+||+||+|+.. +++.||||+++.. .....+.+.+|.+++..+ +||+|+++++++.+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~----- 413 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT----- 413 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBC-----
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEe-----
Confidence 3567888999999999999999965 5899999999753 223456788999999998 69999999998875
Q ss_pred CCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEcc
Q 006145 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISS 629 (659)
Q Consensus 550 ~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~D 629 (659)
.+..|+||||+++|+|.++++.. ..+++..+..|+.||+.||+|||+. +||||||||+|||+|+++.+||+|
T Consensus 414 --~~~~~lV~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~D 485 (674)
T 3pfq_A 414 --MDRLYFVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIAD 485 (674)
T ss_dssp --SSEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECC
T ss_pred --CCEEEEEEeCcCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEee
Confidence 56789999999999999999852 4699999999999999999999998 999999999999999999999999
Q ss_pred Ccccccc-ccccccceecccccccCCCCCC
Q 006145 630 YNLPLLA-ENAEKVGHVIPYSGSIDPTNSA 658 (659)
Q Consensus 630 FGla~~~-~~~~~~~~~~gt~~y~aPE~~~ 658 (659)
||+++.. .........+||+.|||||++.
T Consensus 486 FGla~~~~~~~~~~~~~~GT~~Y~APE~l~ 515 (674)
T 3pfq_A 486 FGMCKENIWDGVTTKTFCGTPDYIAPEIIA 515 (674)
T ss_dssp CTTCEECCCTTCCBCCCCSCSSSCCHHHHT
T ss_pred cceeeccccCCcccccccCCCcccCHhhhc
Confidence 9999864 3334456688999999999753
No 160
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.95 E-value=5.3e-28 Score=258.68 Aligned_cols=173 Identities=21% Similarity=0.392 Sum_probs=145.4
Q ss_pred hhcCCCCCceeccCcCceEEEEEec--------CCcEEEEEEecccCCC-chHHHHHHHHHHhCC-CCCCccceeeeeee
Q 006145 475 ATNNFDTSAFMGEGSQGQMYRGRLK--------NGTFVAIRCLKMKKCH-STRNFMHHIELISKL-RHRHLVSALGHCFE 544 (659)
Q Consensus 475 ~~~~~~~~~~ig~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~-~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~ 544 (659)
..++|...+.||+|+||.||+|+.. ++..||||+++..... ..+++.+|+++++++ +|||||+++++|..
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 3467888899999999999999852 2468999999765432 236799999999999 89999999999975
Q ss_pred ccccCCCCceeEEEEeccCCCChhhhhcCCCC-------------CCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccC
Q 006145 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHA-------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNN 611 (659)
Q Consensus 545 ~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrD 611 (659)
.+..++||||+++|+|.+++..... ...+++..+..++.|+++||+|||+. +|+|||
T Consensus 147 -------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~D 216 (382)
T 3tt0_A 147 -------DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 216 (382)
T ss_dssp -------SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred -------CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCC
Confidence 4568999999999999999975321 24599999999999999999999998 999999
Q ss_pred CCCCceeecCCcceEEccCcccccccccc---ccceecccccccCCCCC
Q 006145 612 LKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 612 lk~~NILld~~~~~kl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~ 657 (659)
|||+|||+++++.+||+|||+++...... ......+|+.|+|||+.
T Consensus 217 lkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~ 265 (382)
T 3tt0_A 217 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 265 (382)
T ss_dssp CCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHH
T ss_pred CCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHh
Confidence 99999999999999999999998664332 23445678899999974
No 161
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.95 E-value=6.5e-28 Score=259.42 Aligned_cols=170 Identities=16% Similarity=0.238 Sum_probs=133.5
Q ss_pred cCCCCC-ceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHh-CCCCCCccceeeeeeeccccCCCCc
Q 006145 477 NNFDTS-AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELIS-KLRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 477 ~~~~~~-~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~-~l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
++|... +.||+|+||+||+|+.. +|+.||||+++. ...+.+|++++. ..+||||+++++++..... ...
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~---~~~ 132 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYA---GRK 132 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEET---TEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeeccc---CCc
Confidence 345554 68999999999999965 599999999863 346788998874 4589999999999864211 135
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecC---CcceEEccC
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ---NLVAKISSY 630 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~---~~~~kl~DF 630 (659)
..|+|||||++|+|.+++... ....+++..+..|+.||++||+|||+. +|+||||||+|||++. ++.+||+||
T Consensus 133 ~~~lv~E~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DF 208 (400)
T 1nxk_A 133 CLLIVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 208 (400)
T ss_dssp EEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred EEEEEEEeCCCCcHHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEec
Confidence 689999999999999999863 234699999999999999999999998 9999999999999997 789999999
Q ss_pred ccccccccccccceecccccccCCCCCC
Q 006145 631 NLPLLAENAEKVGHVIPYSGSIDPTNSA 658 (659)
Q Consensus 631 Gla~~~~~~~~~~~~~gt~~y~aPE~~~ 658 (659)
|+++...........+||+.|||||++.
T Consensus 209 G~a~~~~~~~~~~~~~gt~~y~aPE~~~ 236 (400)
T 1nxk_A 209 GFAKETTSHNSLTTPCYTPYYVAPEVLG 236 (400)
T ss_dssp TTCEECC-----------CTTCCGGGSC
T ss_pred ccccccCCCCccccCCCCCCccCHhhcC
Confidence 9998776555556788999999999863
No 162
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.95 E-value=6.6e-28 Score=258.60 Aligned_cols=171 Identities=13% Similarity=0.236 Sum_probs=145.6
Q ss_pred hcCCCCCceeccC--cCceEEEEEec-CCcEEEEEEecccCCCc--hHHHHHHHHHHhCCCCCCccceeeeeeeccccCC
Q 006145 476 TNNFDTSAFMGEG--SQGQMYRGRLK-NGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (659)
Q Consensus 476 ~~~~~~~~~ig~G--~~g~Vy~~~~~-~g~~vavK~l~~~~~~~--~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 550 (659)
.++|...+.||+| +||.||+|+.. +|+.||||++....... .+.+.+|++++++++|||||++++++.+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------ 97 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA------ 97 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE------
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEE------
Confidence 4568888999999 99999999976 69999999997654322 3568899999999999999999999986
Q ss_pred CCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccC
Q 006145 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (659)
Q Consensus 551 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 630 (659)
.+..++|||||++|+|.+++.... ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 98 -~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~df 172 (389)
T 3gni_B 98 -DNELWVVTSFMAYGSAKDLICTHF-MDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGL 172 (389)
T ss_dssp -TTEEEEEEECCTTCBHHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCG
T ss_pred -CCEEEEEEEccCCCCHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEccc
Confidence 567899999999999999997532 24699999999999999999999998 9999999999999999999999999
Q ss_pred cccccccccc--------ccceecccccccCCCCC
Q 006145 631 NLPLLAENAE--------KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~~~~--------~~~~~~gt~~y~aPE~~ 657 (659)
|.+....... .....+||+.|+|||+.
T Consensus 173 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 207 (389)
T 3gni_B 173 RSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVL 207 (389)
T ss_dssp GGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHH
T ss_pred ccceeeccccccccccccccccccccccccCHHHH
Confidence 9985442211 12335899999999975
No 163
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.95 E-value=5.5e-28 Score=267.47 Aligned_cols=169 Identities=18% Similarity=0.290 Sum_probs=144.0
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccC--CCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK--CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
.++|...+.||+|+||+||+|+.. ++..||||++.... ....+.+.+|+++++.++|||||+++++|.+ .
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------~ 108 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFED-------K 108 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEEC-------S
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-------C
Confidence 345888899999999999999976 58999999997543 2335679999999999999999999999976 5
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCC---cceEEcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN---LVAKISS 629 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~---~~~kl~D 629 (659)
...++||||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+|||++.. +.+||+|
T Consensus 109 ~~~~lv~e~~~~g~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~D 182 (494)
T 3lij_A 109 RNYYLVMECYKGGELFDEIIHR---MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVD 182 (494)
T ss_dssp SEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred CEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEE
Confidence 6789999999999999988752 4689999999999999999999998 99999999999999764 5599999
Q ss_pred CccccccccccccceecccccccCCCCC
Q 006145 630 YNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 630 FGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
||+++...........+||+.|+|||++
T Consensus 183 fG~a~~~~~~~~~~~~~gt~~y~aPE~l 210 (494)
T 3lij_A 183 FGLSAVFENQKKMKERLGTAYYIAPEVL 210 (494)
T ss_dssp CTTCEECBTTBCBCCCCSCTTTCCHHHH
T ss_pred CCCCeECCCCccccccCCCcCeeCHHHH
Confidence 9999887766666778899999999975
No 164
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.95 E-value=1e-27 Score=244.14 Aligned_cols=170 Identities=19% Similarity=0.314 Sum_probs=139.4
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccC---CCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 551 (659)
.++|...+.||+|+||.||+|+.. +|+.||||.+.... ....+.+.+|+++++.++||||+++++++.+
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 82 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST------- 82 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec-------
Confidence 356788899999999999999976 69999999996542 2334679999999999999999999999875
Q ss_pred CceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCc
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 631 (659)
.+..++||||+++++|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 83 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg 156 (276)
T 2h6d_A 83 PTDFFMVMEYVSGGELFDYICKH---GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFG 156 (276)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCC
T ss_pred CCeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecc
Confidence 56789999999999999999752 4589999999999999999999998 99999999999999999999999999
Q ss_pred cccccccccccceecccccccCCCCCC
Q 006145 632 LPLLAENAEKVGHVIPYSGSIDPTNSA 658 (659)
Q Consensus 632 la~~~~~~~~~~~~~gt~~y~aPE~~~ 658 (659)
++.............|++.|+|||+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~aPE~~~ 183 (276)
T 2h6d_A 157 LSNMMSDGEFLRTSCGSPNYAAPEVIS 183 (276)
T ss_dssp GGGCCCC-------------CCTGGGT
T ss_pred cccccCCCcceecccCCccccCHHHHc
Confidence 998776555556678999999999853
No 165
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.95 E-value=2.3e-27 Score=243.07 Aligned_cols=166 Identities=20% Similarity=0.421 Sum_probs=142.0
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCc-------hHHHHHHHHHHhCCCCCCccceeeeeeeccc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS-------TRNFMHHIELISKLRHRHLVSALGHCFECYF 547 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-------~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~ 547 (659)
.++|...+.||+|+||.||+|+.. +++.||||++....... .+++.+|++++++++||||+++++++.+
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--- 94 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN--- 94 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT---
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC---
Confidence 466788899999999999999975 69999999996543321 1679999999999999999999998864
Q ss_pred cCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCC--ccccCCCCCceeecCCcc-
Q 006145 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPG--VFSNNLKITDILLDQNLV- 624 (659)
Q Consensus 548 ~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--iiHrDlk~~NILld~~~~- 624 (659)
..++||||+++|+|.+++... ...+++..+..++.|+++||+|||+. + |+||||||+||+++.++.
T Consensus 95 ------~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~ 163 (287)
T 4f0f_A 95 ------PPRMVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDEN 163 (287)
T ss_dssp ------TTEEEEECCTTCBHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTT
T ss_pred ------CCeEEEEecCCCCHHHHHhcc--cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCC
Confidence 237999999999999988753 34699999999999999999999997 6 999999999999988776
Q ss_pred ----eEEccCccccccccccccceecccccccCCCCC
Q 006145 625 ----AKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 625 ----~kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
+||+|||+++.... ......||+.|+|||+.
T Consensus 164 ~~~~~kl~Dfg~~~~~~~--~~~~~~g~~~y~aPE~~ 198 (287)
T 4f0f_A 164 APVCAKVADFGLSQQSVH--SVSGLLGNFQWMAPETI 198 (287)
T ss_dssp CSCCEEECCCTTCBCCSS--CEECCCCCCTTSCGGGS
T ss_pred CceeEEeCCCCccccccc--cccccCCCccccCchhh
Confidence 99999999975533 34557899999999986
No 166
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.95 E-value=5.2e-28 Score=263.03 Aligned_cols=173 Identities=16% Similarity=0.257 Sum_probs=143.0
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC--chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ..+++.+|+++|++++||||+++++++...... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~--~~ 102 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLL--KF 102 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTT--TC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCC--cC
Confidence 467888999999999999999965 5899999999754322 346799999999999999999999998753211 12
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
...|+||||++ |+|.++++. ...+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGl 175 (432)
T 3n9x_A 103 DELYIVLEIAD-SDLKKLFKT---PIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGL 175 (432)
T ss_dssp CCEEEEEECCS-EEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred CeEEEEEecCC-cCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCC
Confidence 56899999996 599999985 24699999999999999999999998 999999999999999999999999999
Q ss_pred cccccccc-----------------------ccceecccccccCCCCC
Q 006145 633 PLLAENAE-----------------------KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~~-----------------------~~~~~~gt~~y~aPE~~ 657 (659)
|+...... .....+||++|+|||+.
T Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 223 (432)
T 3n9x_A 176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELI 223 (432)
T ss_dssp CEEC-------------------------------CCCCCTTCCHHHH
T ss_pred cccccccccccccccccccccccccccchhccccCCCCCccccCHHHH
Confidence 98764322 23567899999999963
No 167
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.95 E-value=6.5e-28 Score=258.56 Aligned_cols=170 Identities=18% Similarity=0.314 Sum_probs=134.3
Q ss_pred hhcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCC--CchHHHHHHHHHHhCCC-CCCccceeeeeeeccccCC
Q 006145 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDDS 550 (659)
Q Consensus 475 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~ 550 (659)
..++|...+.||+|+||.||+|+.. +|+.||||++..... ...+++.+|+.++.+++ |||||++++++...
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~----- 81 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRAD----- 81 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECT-----
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecC-----
Confidence 3567889999999999999999965 699999999964422 23456889999999997 99999999998752
Q ss_pred CCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccC
Q 006145 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (659)
Q Consensus 551 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 630 (659)
.....|+|||||+ |+|.++++. ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 82 ~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DF 153 (388)
T 3oz6_A 82 NDRDVYLVFDYME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADF 153 (388)
T ss_dssp TSSCEEEEEECCS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred CCCEEEEEecccC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCC
Confidence 2346899999997 599999975 3689999999999999999999998 9999999999999999999999999
Q ss_pred cccccccc----------------------ccccceecccccccCCCCC
Q 006145 631 NLPLLAEN----------------------AEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~~----------------------~~~~~~~~gt~~y~aPE~~ 657 (659)
|+|+.... .......+||++|||||++
T Consensus 154 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 202 (388)
T 3oz6_A 154 GLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEIL 202 (388)
T ss_dssp TTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHH
T ss_pred cccccccccccccccccccccccccccccccccccCCcccCCcCCHHHh
Confidence 99976532 1123456899999999975
No 168
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.95 E-value=3.3e-28 Score=249.61 Aligned_cols=167 Identities=20% Similarity=0.338 Sum_probs=143.6
Q ss_pred hcCCCCCceeccCcCceEEEEEecC-C-------cEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLKN-G-------TFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYF 547 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~~-g-------~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~ 547 (659)
.++|...+.||+|+||.||+|+... + ..||+|.+........++|.+|++++++++||||+++++++.+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 83 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC--- 83 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC---
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe---
Confidence 3567788999999999999998653 4 5799999976655556789999999999999999999999976
Q ss_pred cCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcc---
Q 006145 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV--- 624 (659)
Q Consensus 548 ~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~--- 624 (659)
.+..++||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 84 ----~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 154 (289)
T 4fvq_A 84 ----GDENILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKT 154 (289)
T ss_dssp ----TTCCEEEEECCTTCBHHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGG
T ss_pred ----CCCCEEEEECCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccc
Confidence 45679999999999999999853 23489999999999999999999998 9999999999999998877
Q ss_pred -----eEEccCccccccccccccceecccccccCCCCC
Q 006145 625 -----AKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 625 -----~kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
+||+|||++...... ....||+.|+|||+.
T Consensus 155 ~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~y~aPE~~ 189 (289)
T 4fvq_A 155 GNPPFIKLSDPGISITVLPK---DILQERIPWVPPECI 189 (289)
T ss_dssp TBCCEEEECCCCSCTTTSCH---HHHHHTTTTSCHHHH
T ss_pred cccceeeeccCcccccccCc---cccCCcCcccCHHHh
Confidence 999999999765432 335688999999964
No 169
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.95 E-value=9.2e-28 Score=245.61 Aligned_cols=169 Identities=21% Similarity=0.307 Sum_probs=147.4
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC--chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
.++|...+.||+|+||.||+|+.. +|+.||+|++...... ..+.+.+|++++++++||||+++++++.+ .
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~ 77 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-------E 77 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------S
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEc-------C
Confidence 467888999999999999999965 5899999999765432 23568899999999999999999999975 5
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcc---eEEcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV---AKISS 629 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~---~kl~D 629 (659)
+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|
T Consensus 78 ~~~~~v~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~D 151 (284)
T 3kk8_A 78 SFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLAD 151 (284)
T ss_dssp SEEEEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECC
T ss_pred CEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEee
Confidence 6689999999999999988752 4689999999999999999999998 9999999999999986655 99999
Q ss_pred CccccccccccccceecccccccCCCCC
Q 006145 630 YNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 630 FGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
||++.............||+.|+|||+.
T Consensus 152 fg~~~~~~~~~~~~~~~~~~~y~aPE~~ 179 (284)
T 3kk8_A 152 FGLAIEVNDSEAWHGFAGTPGYLSPEVL 179 (284)
T ss_dssp CTTCEECCSSCBCCCSCSCGGGCCHHHH
T ss_pred ceeeEEcccCccccCCCCCcCCcCchhh
Confidence 9999877666656667899999999974
No 170
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.95 E-value=9.5e-28 Score=255.07 Aligned_cols=174 Identities=20% Similarity=0.368 Sum_probs=151.1
Q ss_pred HHHHhhcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC--------chHHHHHHHHHHhCC-CCCCccceee
Q 006145 471 ELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--------STRNFMHHIELISKL-RHRHLVSALG 540 (659)
Q Consensus 471 ~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--------~~~~~~~Ei~~l~~l-~H~niv~l~g 540 (659)
......++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+++++++ +||||+++++
T Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 33445577899999999999999999976 6999999998754321 124588999999999 7999999999
Q ss_pred eeeeccccCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeec
Q 006145 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620 (659)
Q Consensus 541 ~~~~~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld 620 (659)
++.. ....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 168 ~~~~-------~~~~~lv~e~~~g~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~ 234 (365)
T 2y7j_A 168 SYES-------SSFMFLVFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLD 234 (365)
T ss_dssp EEEB-------SSEEEEEECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred EEee-------CCEEEEEEEeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 9875 5678999999999999999975 24689999999999999999999998 999999999999999
Q ss_pred CCcceEEccCccccccccccccceecccccccCCCCC
Q 006145 621 QNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 621 ~~~~~kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
+++.+||+|||++............+||+.|+|||+.
T Consensus 235 ~~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~ 271 (365)
T 2y7j_A 235 DNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEIL 271 (365)
T ss_dssp TTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHH
T ss_pred CCCCEEEEecCcccccCCCcccccCCCCCCccChhhc
Confidence 9999999999999877665566678899999999964
No 171
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.95 E-value=2.6e-28 Score=259.60 Aligned_cols=172 Identities=23% Similarity=0.349 Sum_probs=142.3
Q ss_pred hcCCCCCceeccCcCceEEEEEec------CCcEEEEEEecccCC-CchHHHHHHHHHHhCCCCCCccceeeeeeecccc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 548 (659)
.++|...+.||+|+||+||+|++. +++.||||+++.... ....++.+|++++++++|||||++++++..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~---- 145 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ---- 145 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec----
Confidence 456778899999999999999953 467899999965432 234579999999999999999999999975
Q ss_pred CCCCceeEEEEeccCCCChhhhhcCCC----CCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCc-
Q 006145 549 DSSVSRIFLIFEYVPNGTLRSWISEGH----AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL- 623 (659)
Q Consensus 549 ~~~~~~~~lV~Ey~~~GsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~- 623 (659)
....++||||+++|+|.++++... ....+++.++..++.|+++||+|||+. +|+||||||+|||++.++
T Consensus 146 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~ 219 (367)
T 3l9p_A 146 ---SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 219 (367)
T ss_dssp ---SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSST
T ss_pred ---CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCC
Confidence 456799999999999999997421 124589999999999999999999998 999999999999999554
Q ss_pred --ceEEccCccccccccc---cccceecccccccCCCCC
Q 006145 624 --VAKISSYNLPLLAENA---EKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 624 --~~kl~DFGla~~~~~~---~~~~~~~gt~~y~aPE~~ 657 (659)
.+||+|||+++..... .......||+.|+|||+.
T Consensus 220 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~ 258 (367)
T 3l9p_A 220 GRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAF 258 (367)
T ss_dssp TCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHH
T ss_pred CceEEECCCccccccccccccccCCCcCCcccEECHHHh
Confidence 5999999999755322 223446789999999964
No 172
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.95 E-value=8.8e-27 Score=262.34 Aligned_cols=120 Identities=30% Similarity=0.336 Sum_probs=109.3
Q ss_pred ccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCC
Q 006145 101 TTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPI 180 (659)
Q Consensus 101 ~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 180 (659)
..+.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..++++++
T Consensus 46 ~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~ 125 (570)
T 2z63_A 46 YSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKT 125 (570)
T ss_dssp TTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTT
T ss_pred hHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCcccccccc
Confidence 46889999999999999999988999999999999999999999888899999999999999999999766667999999
Q ss_pred CCEEEccCCcCCc-cCCcccCCCCCCcEEeccccccccCCC
Q 006145 181 LAVLSLRNNMFNG-TLPDSFSYLENLRVLALSNNHFYGEVP 220 (659)
Q Consensus 181 L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p 220 (659)
|++|++++|.+++ .+|..|+++++|++|++++|++++..+
T Consensus 126 L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~ 166 (570)
T 2z63_A 126 LKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (570)
T ss_dssp CCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECG
T ss_pred ccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecH
Confidence 9999999999987 479999999999999999998876543
No 173
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.95 E-value=3.6e-28 Score=265.77 Aligned_cols=170 Identities=24% Similarity=0.399 Sum_probs=140.7
Q ss_pred hhcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCce
Q 006145 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (659)
Q Consensus 475 ~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 554 (659)
..++|...+.||+|+||.||+|++..+..||||+++... ...++|.+|+++|++++||||++++++|.+ +.
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--------~~ 252 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--------EP 252 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS--------SS
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC--------Cc
Confidence 456678889999999999999999888889999997654 345789999999999999999999999863 35
Q ss_pred eEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcccc
Q 006145 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (659)
Q Consensus 555 ~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~ 634 (659)
.++|||||++|+|.++++.. ....+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 253 ~~iv~e~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 328 (452)
T 1fmk_A 253 IYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLAR 328 (452)
T ss_dssp CEEEECCCTTCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC
T ss_pred eEEEehhhcCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccce
Confidence 79999999999999999742 124589999999999999999999998 99999999999999999999999999998
Q ss_pred ccccccc--cceecccccccCCCCC
Q 006145 635 LAENAEK--VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 635 ~~~~~~~--~~~~~gt~~y~aPE~~ 657 (659)
....... .....++..|+|||+.
T Consensus 329 ~~~~~~~~~~~~~~~~~~y~aPE~~ 353 (452)
T 1fmk_A 329 LIEDNEYTARQGAKFPIKWTAPEAA 353 (452)
T ss_dssp --------------CCGGGSCHHHH
T ss_pred ecCCCceecccCCcccccccCHhHH
Confidence 7643322 2345678899999964
No 174
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.95 E-value=2.1e-27 Score=244.22 Aligned_cols=171 Identities=19% Similarity=0.275 Sum_probs=143.6
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCcee
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~ 555 (659)
++|.....||+|+||.||+|+.. +++.||||.+........+.+.+|+++++.++||||+++++++.. .+..
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------~~~~ 94 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE-------NGFI 94 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEE-------TTEE
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEe-------CCcE
Confidence 34555679999999999999964 589999999986655556789999999999999999999999976 4678
Q ss_pred EEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecC-CcceEEccCcccc
Q 006145 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ-NLVAKISSYNLPL 634 (659)
Q Consensus 556 ~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~-~~~~kl~DFGla~ 634 (659)
++||||+++|+|.+++........+++..+..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++
T Consensus 95 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~ 171 (295)
T 2clq_A 95 KIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSK 171 (295)
T ss_dssp EEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCE
T ss_pred EEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeeccccc
Confidence 99999999999999998643345678999999999999999999998 9999999999999997 8999999999997
Q ss_pred ccccc-cccceecccccccCCCCC
Q 006145 635 LAENA-EKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 635 ~~~~~-~~~~~~~gt~~y~aPE~~ 657 (659)
..... .......||+.|+|||+.
T Consensus 172 ~~~~~~~~~~~~~~~~~y~aPE~~ 195 (295)
T 2clq_A 172 RLAGINPCTETFTGTLQYMAPEII 195 (295)
T ss_dssp ESCC-----CCCCCCGGGCCHHHH
T ss_pred ccCCCCCcccccCCCccccChhhh
Confidence 66432 223456799999999964
No 175
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.95 E-value=8.5e-28 Score=265.47 Aligned_cols=170 Identities=19% Similarity=0.305 Sum_probs=146.1
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccC--CCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK--CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
.++|...+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+ .
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------~ 93 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-------S 93 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------S
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEc-------C
Confidence 356888899999999999999975 69999999996432 3345779999999999999999999999976 5
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeec---CCcceEEcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD---QNLVAKISS 629 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld---~~~~~kl~D 629 (659)
...++||||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+|||++ .++.+||+|
T Consensus 94 ~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~D 167 (486)
T 3mwu_A 94 SSFYIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIID 167 (486)
T ss_dssp SEEEEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECS
T ss_pred CEEEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEE
Confidence 6789999999999999988752 4689999999999999999999998 999999999999995 456899999
Q ss_pred CccccccccccccceecccccccCCCCCC
Q 006145 630 YNLPLLAENAEKVGHVIPYSGSIDPTNSA 658 (659)
Q Consensus 630 FGla~~~~~~~~~~~~~gt~~y~aPE~~~ 658 (659)
||+++...........+||+.|+|||++.
T Consensus 168 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~ 196 (486)
T 3mwu_A 168 FGLSTCFQQNTKMKDRIGTAYYIAPEVLR 196 (486)
T ss_dssp CSCTTTBCCC----CCTTGGGGCCGGGGG
T ss_pred CCcCeECCCCCccCCCcCCCCCCCHHHhC
Confidence 99998776666666788999999999863
No 176
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.95 E-value=1.5e-27 Score=243.31 Aligned_cols=170 Identities=19% Similarity=0.382 Sum_probs=132.6
Q ss_pred hcCCCCCceeccCcCceEEEEEe-cCCcEEEEEEecccC---CCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 551 (659)
.++|...+.||+|+||.||+|+. .+|+.||||.+.... ....+++.+|++++++++||||+++++++.+
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 82 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFED------- 82 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEEC-------
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEcc-------
Confidence 35688889999999999999996 469999999996432 2234679999999999999999999999976
Q ss_pred CceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCc
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 631 (659)
.+..++||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 83 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg 157 (278)
T 3cok_A 83 SNYVYLVLEMCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFG 157 (278)
T ss_dssp SSEEEEEEECCTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCT
T ss_pred CCeEEEEEecCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeec
Confidence 46789999999999999999853 24689999999999999999999998 99999999999999999999999999
Q ss_pred cccccccc-cccceecccccccCCCCC
Q 006145 632 LPLLAENA-EKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 632 la~~~~~~-~~~~~~~gt~~y~aPE~~ 657 (659)
++...... .......||+.|+|||+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~ 184 (278)
T 3cok_A 158 LATQLKMPHEKHYTLCGTPNYISPEIA 184 (278)
T ss_dssp TCEECC---------------------
T ss_pred ceeeccCCCCcceeccCCCCcCCcchh
Confidence 99766432 223456799999999975
No 177
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.95 E-value=7.6e-28 Score=249.85 Aligned_cols=173 Identities=22% Similarity=0.346 Sum_probs=144.5
Q ss_pred hhcCCCCCceeccCcCceEEEEEec------CCcEEEEEEecccCC-CchHHHHHHHHHHhCCCCCCccceeeeeeeccc
Q 006145 475 ATNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYF 547 (659)
Q Consensus 475 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~ 547 (659)
..++|...+.||+|+||.||+|+.. +++.||||+++.... ...+++.+|++++++++||||+++++++.+
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 97 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ--- 97 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec---
Confidence 3567888899999999999999852 358999999975432 233679999999999999999999999875
Q ss_pred cCCCCceeEEEEeccCCCChhhhhcCCCC---------------------CCCCCHHHHHHHHHHHHHHhhhhcCCCCCC
Q 006145 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHA---------------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPG 606 (659)
Q Consensus 548 ~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ 606 (659)
.+..++||||+++|+|.+++..... ...+++..+..++.|+++||+|||+. +
T Consensus 98 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ 170 (314)
T 2ivs_A 98 ----DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---K 170 (314)
T ss_dssp ----SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred ----CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---C
Confidence 4568999999999999999975321 13489999999999999999999998 9
Q ss_pred ccccCCCCCceeecCCcceEEccCccccccccccc---cceecccccccCCCCC
Q 006145 607 VFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 607 iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~ 657 (659)
|+||||||+||++++++.+||+|||+++....... .....+|+.|+|||+.
T Consensus 171 ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 224 (314)
T 2ivs_A 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESL 224 (314)
T ss_dssp EECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHH
T ss_pred CcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhh
Confidence 99999999999999999999999999976643222 2345678899999964
No 178
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=7.6e-28 Score=253.50 Aligned_cols=174 Identities=24% Similarity=0.395 Sum_probs=144.0
Q ss_pred HhhcCCCCCceeccCcCceEEEEEec------CCcEEEEEEecccC-CCchHHHHHHHHHHhCC-CCCCccceeeeeeec
Q 006145 474 EATNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKK-CHSTRNFMHHIELISKL-RHRHLVSALGHCFEC 545 (659)
Q Consensus 474 ~~~~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~ 545 (659)
...++|...+.||+|+||.||+|+.. ++..||||.+.... ....+.+.+|+++++++ +||||+++++++..
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~- 120 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL- 120 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee-
Confidence 34577888999999999999999962 36689999997543 23346799999999999 89999999999975
Q ss_pred cccCCCCceeEEEEeccCCCChhhhhcCCCCC--------------------CCCCHHHHHHHHHHHHHHhhhhcCCCCC
Q 006145 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAH--------------------QSLTWTQRISAAIGVAKGIQFLHTGIVP 605 (659)
Q Consensus 546 ~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~--------------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~ 605 (659)
.+..++||||+++|+|.+++...... ..++|..+..++.|+++||+|||+.
T Consensus 121 ------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--- 191 (344)
T 1rjb_A 121 ------SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK--- 191 (344)
T ss_dssp ------SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred ------CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---
Confidence 45689999999999999999853221 2489999999999999999999998
Q ss_pred CccccCCCCCceeecCCcceEEccCccccccccccc---cceecccccccCCCCC
Q 006145 606 GVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 606 ~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~ 657 (659)
+|+||||||+||+++.++.+||+|||+++....... .....+|+.|+|||+.
T Consensus 192 ~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~ 246 (344)
T 1rjb_A 192 SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESL 246 (344)
T ss_dssp TEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHH
T ss_pred CcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHh
Confidence 999999999999999999999999999976643322 2446678899999964
No 179
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.95 E-value=1.1e-27 Score=265.86 Aligned_cols=169 Identities=18% Similarity=0.265 Sum_probs=145.8
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCC-------------CchHHHHHHHHHHhCCCCCCccceeee
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-------------HSTRNFMHHIELISKLRHRHLVSALGH 541 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-------------~~~~~~~~Ei~~l~~l~H~niv~l~g~ 541 (659)
.++|...+.||+|+||+||+|+.. +++.||||++..... ...+++.+|++++++++|||||+++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 567888999999999999999975 588999999975431 224679999999999999999999999
Q ss_pred eeeccccCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecC
Q 006145 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ 621 (659)
Q Consensus 542 ~~~~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~ 621 (659)
|.+ ....++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 115 ~~~-------~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~ 181 (504)
T 3q5i_A 115 FED-------KKYFYLVTEFYEGGELFEQIINR---HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLEN 181 (504)
T ss_dssp EEC-------SSEEEEEEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESS
T ss_pred EEc-------CCEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEec
Confidence 976 56789999999999999998752 4699999999999999999999998 9999999999999987
Q ss_pred Cc---ceEEccCccccccccccccceecccccccCCCCC
Q 006145 622 NL---VAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 622 ~~---~~kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
++ .+||+|||+++...........+||+.|+|||++
T Consensus 182 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~ 220 (504)
T 3q5i_A 182 KNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVL 220 (504)
T ss_dssp TTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHH
T ss_pred CCCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHh
Confidence 65 6999999999887766666778899999999975
No 180
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.94 E-value=1e-27 Score=248.76 Aligned_cols=168 Identities=19% Similarity=0.305 Sum_probs=139.4
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCc--hHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCc
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~--~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
++|...+.||+|+||+||+|+.. +|+.||||++....... .+.+.+|++++++++||||+++++++.+ .+
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~~ 75 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRR-------KR 75 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------TT
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeec-------CC
Confidence 56888899999999999999976 49999999986544322 3568899999999999999999999976 46
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCccc
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla 633 (659)
..++||||+++++|.++++.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 149 (311)
T 4agu_A 76 RLHLVFEYCDHTVLHELDRYQ---RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFA 149 (311)
T ss_dssp EEEEEEECCSEEHHHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred eEEEEEEeCCCchHHHHHhhh---cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCc
Confidence 789999999999999988752 4589999999999999999999998 9999999999999999999999999999
Q ss_pred cccccc-cccceecccccccCCCCC
Q 006145 634 LLAENA-EKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 634 ~~~~~~-~~~~~~~gt~~y~aPE~~ 657 (659)
+..... .......||+.|+|||+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~y~aPE~~ 174 (311)
T 4agu_A 150 RLLTGPSDYYDDEVATRWYRSPELL 174 (311)
T ss_dssp EECC------------GGGCCHHHH
T ss_pred hhccCcccccCCCcCCccccChHHH
Confidence 776532 234567899999999964
No 181
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.94 E-value=8.1e-28 Score=253.80 Aligned_cols=165 Identities=20% Similarity=0.348 Sum_probs=142.4
Q ss_pred cCCCCCceeccCcCceEEEEEe-cCCcEEEEEEecccCCCc---hHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHS---TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~---~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
+.|...+.||+|+||.||+|+. .+|+.||||++....... .+++.+|++++++++|||||+++++|.. .
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------~ 126 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-------E 126 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------T
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-------C
Confidence 4477889999999999999996 469999999997554322 3568999999999999999999999986 4
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
+..++||||++ |+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 127 ~~~~lv~e~~~-g~l~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~ 200 (348)
T 1u5q_A 127 HTAWLVMEYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGS 200 (348)
T ss_dssp TEEEEEEECCS-EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTT
T ss_pred CeEEEEEecCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccC
Confidence 67899999997 6888888632 24689999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccceecccccccCCCCC
Q 006145 633 PLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
++..... ...+||+.|+|||+.
T Consensus 201 a~~~~~~---~~~~gt~~y~aPE~~ 222 (348)
T 1u5q_A 201 ASIMAPA---NSFVGTPYWMAPEVI 222 (348)
T ss_dssp CBSSSSB---CCCCSCGGGCCHHHH
T ss_pred ceecCCC---CcccCCcceeCHhhh
Confidence 9766432 346799999999974
No 182
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=3.1e-28 Score=257.85 Aligned_cols=169 Identities=19% Similarity=0.298 Sum_probs=145.1
Q ss_pred hcCCCCCceeccCcCceEEEEEe----cCCcEEEEEEecccC----CCchHHHHHHHHHHhCC-CCCCccceeeeeeecc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRL----KNGTFVAIRCLKMKK----CHSTRNFMHHIELISKL-RHRHLVSALGHCFECY 546 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~----~~g~~vavK~l~~~~----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~ 546 (659)
.++|...+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|+++++++ +||||+++++++..
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-- 130 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT-- 130 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE--
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee--
Confidence 35788889999999999999997 368999999997532 12345688899999999 69999999999876
Q ss_pred ccCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceE
Q 006145 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAK 626 (659)
Q Consensus 547 ~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~k 626 (659)
.+..++||||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+|
T Consensus 131 -----~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~k 199 (355)
T 1vzo_A 131 -----ETKLHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVV 199 (355)
T ss_dssp -----TTEEEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEE
T ss_pred -----CceEEEEeecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEE
Confidence 45789999999999999999752 4689999999999999999999998 999999999999999999999
Q ss_pred EccCccccccccc--cccceecccccccCCCCC
Q 006145 627 ISSYNLPLLAENA--EKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 627 l~DFGla~~~~~~--~~~~~~~gt~~y~aPE~~ 657 (659)
|+|||+++..... ......+||+.|+|||+.
T Consensus 200 l~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~ 232 (355)
T 1vzo_A 200 LTDFGLSKEFVADETERAYDFCGTIEYMAPDIV 232 (355)
T ss_dssp ESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHH
T ss_pred EeeCCCCeecccCCCCcccCcccCcCccChhhh
Confidence 9999999765322 223456899999999975
No 183
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.94 E-value=3.6e-26 Score=249.70 Aligned_cols=225 Identities=29% Similarity=0.391 Sum_probs=148.8
Q ss_pred CCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEc
Q 006145 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (659)
Q Consensus 107 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 186 (659)
++|++|++++|.+++ +| .|+++++|++|++++|++++ +|..+ .+|++|++++|++++ +| .++.+++|++|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 577777777777776 55 47777777777777777774 55432 477777777777775 55 4777777777777
Q ss_pred cCCcCCccCCcccCCCCCCcEEeccccccccCCCCCCCCCcCCEEEcccCCCCCCCCCCCcccceEecCCCcCCccCchh
Q 006145 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAE 266 (659)
Q Consensus 187 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~ 266 (659)
++|++++ +|... ++|++|++++|.++ .+|++..+++|++|++++|++++ +|....+|+.|++++|++++ +|..
T Consensus 203 ~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~N~l~~-l~~~ 275 (454)
T 1jl5_A 203 DNNSLKK-LPDLP---LSLESIVAGNNILE-ELPELQNLPFLTTIYADNNLLKT-LPDLPPSLEALNVRDNYLTD-LPEL 275 (454)
T ss_dssp CSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSSCCSS-CCSCCTTCCEEECCSSCCSC-CCCC
T ss_pred CCCcCCc-CCCCc---CcccEEECcCCcCC-cccccCCCCCCCEEECCCCcCCc-ccccccccCEEECCCCcccc-cCcc
Confidence 7777764 44322 46677777777666 44556667777777777776665 33344566666666666655 3332
Q ss_pred ccCCccccEEeccCccccc--CCchhh-------------cCC-CcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCC
Q 006145 267 VSSYYQLQRLDLSSNRFVG--PFPQAL-------------LSL-PSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNL 330 (659)
Q Consensus 267 ~~~l~~L~~L~Ls~N~l~~--~~p~~l-------------~~l-~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~ 330 (659)
+++|+.|++++|++++ .+|..+ ..+ ++|+.|++++|++++ +|.. +++|+.|++++|+
T Consensus 276 ---~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~ 348 (454)
T 1jl5_A 276 ---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNH 348 (454)
T ss_dssp ---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSC
T ss_pred ---cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCc
Confidence 2445555555555544 222211 123 478888888888886 5543 4788889999998
Q ss_pred CcccCChhhhCCCCCCEEEcCCccccC
Q 006145 331 LTGQLPNCLLAGSKNRVVLYARNCLAA 357 (659)
Q Consensus 331 l~g~ip~~~~~~~~l~~l~~~~N~l~~ 357 (659)
++ .+|. .+++++.+++++|.+++
T Consensus 349 l~-~lp~---~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 349 LA-EVPE---LPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp CS-CCCC---CCTTCCEEECCSSCCSS
T ss_pred cc-cccc---hhhhccEEECCCCCCCc
Confidence 88 5776 36778889999998886
No 184
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.94 E-value=7.5e-28 Score=249.59 Aligned_cols=167 Identities=17% Similarity=0.339 Sum_probs=134.9
Q ss_pred cCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCceeE
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~~ 556 (659)
++|...+.||+|+||+||+|+.. ++.||||++... ...++|.+|++++++++||||+++++++.+ ..+
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---------~~~ 75 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN---------PVC 75 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT---------TTE
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC---------CcE
Confidence 45777899999999999999975 789999998643 245679999999999999999999998853 369
Q ss_pred EEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcc-eEEccCccccc
Q 006145 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV-AKISSYNLPLL 635 (659)
Q Consensus 557 lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~-~kl~DFGla~~ 635 (659)
+||||+++|+|.++++.......+++..+..++.|+++||+|||+....+|+||||||+||++++++. +||+|||++..
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~ 155 (307)
T 2eva_A 76 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD 155 (307)
T ss_dssp EEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---
T ss_pred EEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccc
Confidence 99999999999999986433345789999999999999999999943238999999999999998876 89999999976
Q ss_pred cccccccceecccccccCCCCC
Q 006145 636 AENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 636 ~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
.... .....||+.|+|||+.
T Consensus 156 ~~~~--~~~~~gt~~y~aPE~~ 175 (307)
T 2eva_A 156 IQTH--MTNNKGSAAWMAPEVF 175 (307)
T ss_dssp -----------CCTTSSCHHHH
T ss_pred cccc--cccCCCCCceEChhhh
Confidence 5432 2345799999999975
No 185
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.94 E-value=1.1e-27 Score=244.78 Aligned_cols=168 Identities=18% Similarity=0.323 Sum_probs=142.4
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC------chHHHHHHHHHHhCCCCCCccceeeeeeeccccC
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH------STRNFMHHIELISKLRHRHLVSALGHCFECYFDD 549 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 549 (659)
++|...+.||+|+||.||+|+.. +|+.||||.++..... ..+++.+|++++++++||||+++++++.+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----- 79 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN----- 79 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecC-----
Confidence 45778899999999999999976 5999999999754321 24679999999999999999999999976
Q ss_pred CCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCc----ce
Q 006145 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL----VA 625 (659)
Q Consensus 550 ~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~----~~ 625 (659)
....++||||+++++|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||++++++ .+
T Consensus 80 --~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~ 151 (283)
T 3bhy_A 80 --KTDVVLILELVSGGELFDFLAE---KESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRI 151 (283)
T ss_dssp --SSEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCE
T ss_pred --CCeEEEEEeecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCce
Confidence 4678999999999999999975 24689999999999999999999998 999999999999999877 89
Q ss_pred EEccCccccccccccccceecccccccCCCCC
Q 006145 626 KISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 626 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
||+|||++.............|++.|+|||+.
T Consensus 152 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~ 183 (283)
T 3bhy_A 152 KLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 183 (283)
T ss_dssp EECCCTTCEECC--------CCCGGGCCHHHH
T ss_pred EEEecccceeccCCCcccccCCCcCccCccee
Confidence 99999999877655555667899999999964
No 186
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.94 E-value=1.6e-27 Score=251.36 Aligned_cols=170 Identities=13% Similarity=0.254 Sum_probs=147.6
Q ss_pred hcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCCc---h--------------HHHHHHHHHHhCCCCCCccce
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHS---T--------------RNFMHHIELISKLRHRHLVSA 538 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~---~--------------~~~~~Ei~~l~~l~H~niv~l 538 (659)
.++|...+.||+|+||.||+|+. +|+.||||++....... . +.|.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46788899999999999999999 89999999997543211 1 789999999999999999999
Q ss_pred eeeeeeccccCCCCceeEEEEeccCCCChhhh------hcCCCCCCCCCHHHHHHHHHHHHHHhhhhcC-CCCCCccccC
Q 006145 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSW------ISEGHAHQSLTWTQRISAAIGVAKGIQFLHT-GIVPGVFSNN 611 (659)
Q Consensus 539 ~g~~~~~~~~~~~~~~~~lV~Ey~~~GsL~~~------l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiHrD 611 (659)
++++.+ .+..++||||+++|+|.++ +.. .....+++..+..++.|+++||+|||+ . +|+|||
T Consensus 109 ~~~~~~-------~~~~~lv~e~~~~~~L~~~~~~~~~l~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~d 177 (348)
T 2pml_X 109 EGIITN-------YDEVYIIYEYMENDSILKFDEYFFVLDK-NYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRD 177 (348)
T ss_dssp SEEEES-------SSEEEEEEECCTTCBSSEESSSEESSCS-SSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCC
T ss_pred EEEEee-------CCeEEEEEeccCCCcHHHHHHHhhhhhh-ccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecC
Confidence 999976 4678999999999999999 553 123579999999999999999999998 7 999999
Q ss_pred CCCCceeecCCcceEEccCccccccccccccceecccccccCCCCCC
Q 006145 612 LKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSA 658 (659)
Q Consensus 612 lk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~ 658 (659)
|||+||+++.++.+||+|||++...... ......||+.|+|||+..
T Consensus 178 l~p~Nil~~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~ 223 (348)
T 2pml_X 178 VKPSNILMDKNGRVKLSDFGESEYMVDK-KIKGSRGTYEFMPPEFFS 223 (348)
T ss_dssp CCGGGEEECTTSCEEECCCTTCEECBTT-EECSSCSCGGGCCGGGGS
T ss_pred CChHhEEEcCCCcEEEeccccccccccc-cccCCCCCcCccCchhhc
Confidence 9999999999999999999999876443 445678999999999864
No 187
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=3.3e-28 Score=268.37 Aligned_cols=233 Identities=24% Similarity=0.224 Sum_probs=198.0
Q ss_pred CCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEE
Q 006145 105 KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVL 184 (659)
Q Consensus 105 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 184 (659)
.+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..| +..+++|++|+|++|.+++..+ .++|+.|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 44589999999999999989999999999999999999998776 8999999999999999985432 3899999
Q ss_pred EccCCcCCccCCcccCCCCCCcEEeccccccccCCCC-CCCCCcCCEEEcccCCCCCCCCCC----CcccceEecCCCcC
Q 006145 185 SLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKV----GKKLVTMILSKNKF 259 (659)
Q Consensus 185 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~~----~~~L~~L~l~~N~l 259 (659)
++++|.+++..+. .+++|+.|+|++|.+++.+|. +..+++|++|+|++|.+++.+|.. +++|+.|+|++|.|
T Consensus 105 ~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 105 HAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp ECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred ECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 9999999977654 468899999999999998774 888999999999999999876653 47899999999999
Q ss_pred CccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCc-ccCChh
Q 006145 260 RSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT-GQLPNC 338 (659)
Q Consensus 260 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~-g~ip~~ 338 (659)
++..+ +..+++|+.|+|++|.|++..| .+..+++|+.|+|++|.+++ +|..+..+++|+.|++++|.++ +.+|..
T Consensus 182 ~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~ 257 (487)
T 3oja_A 182 YDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDF 257 (487)
T ss_dssp CEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHH
T ss_pred ccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHH
Confidence 88632 3468999999999999997544 58899999999999999996 6777888999999999999998 777887
Q ss_pred hhCCCCCCEEEcC
Q 006145 339 LLAGSKNRVVLYA 351 (659)
Q Consensus 339 ~~~~~~l~~l~~~ 351 (659)
+..++.+..+.+.
T Consensus 258 ~~~l~~L~~l~~~ 270 (487)
T 3oja_A 258 FSKNQRVQTVAKQ 270 (487)
T ss_dssp HTTCHHHHHHHHH
T ss_pred HHhCCCCcEEecc
Confidence 7776666555554
No 188
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.94 E-value=8.6e-28 Score=265.34 Aligned_cols=169 Identities=18% Similarity=0.304 Sum_probs=149.0
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccC---CCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 551 (659)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~------- 97 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED------- 97 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-------
Confidence 356888899999999999999976 69999999996543 2345679999999999999999999999976
Q ss_pred CceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceee---cCCcceEEc
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL---DQNLVAKIS 628 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---d~~~~~kl~ 628 (659)
.+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+
T Consensus 98 ~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~ 171 (484)
T 3nyv_A 98 KGYFYLVGEVYTGGELFDEIISR---KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRII 171 (484)
T ss_dssp SSEEEEEECCCCSCBHHHHHHTC---SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEEC
T ss_pred CCEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEE
Confidence 56789999999999999998753 4699999999999999999999998 99999999999999 467899999
Q ss_pred cCccccccccccccceecccccccCCCCC
Q 006145 629 SYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 629 DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
|||+++...........+||+.|+|||++
T Consensus 172 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~ 200 (484)
T 3nyv_A 172 DFGLSTHFEASKKMKDKIGTAYYIAPEVL 200 (484)
T ss_dssp CTTHHHHBCCCCSHHHHTTGGGTCCHHHH
T ss_pred eeeeeEEcccccccccCCCCccccCceee
Confidence 99999877666666677899999999974
No 189
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.94 E-value=1.3e-27 Score=242.28 Aligned_cols=170 Identities=21% Similarity=0.398 Sum_probs=143.4
Q ss_pred hcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCC--chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
.++|...+.||+|+||.||+|+.. |+.||||+++..... ..++|.+|++++++++||||++++++|.+. ...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 82 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP-----PAP 82 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTT-----TSS
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccC-----CCC
Confidence 356778899999999999999985 889999999765432 235799999999999999999999999752 135
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCccc
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla 633 (659)
..++||||+++|+|.++++.. ....+++..+..++.|+++||+|||+. .++|+||||||+||++++++.++|+|||++
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~ 160 (271)
T 3kmu_A 83 HPTLITHWMPYGSLYNVLHEG-TNFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVK 160 (271)
T ss_dssp SCEEEEECCTTCBHHHHHHSC-SSCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSC
T ss_pred CeEeeecccCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccce
Confidence 689999999999999999863 234689999999999999999999997 223999999999999999999999999887
Q ss_pred cccccccccceecccccccCCCCC
Q 006145 634 LLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 634 ~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
..... ....||+.|+|||+.
T Consensus 161 ~~~~~----~~~~~t~~y~aPE~~ 180 (271)
T 3kmu_A 161 FSFQS----PGRMYAPAWVAPEAL 180 (271)
T ss_dssp CTTSC----TTCBSCGGGSCHHHH
T ss_pred eeecc----cCccCCccccChhhh
Confidence 54322 335789999999974
No 190
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.94 E-value=5.7e-28 Score=252.83 Aligned_cols=168 Identities=20% Similarity=0.355 Sum_probs=135.5
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcE----EEEEEecccC-CCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCC
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTF----VAIRCLKMKK-CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~----vavK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 550 (659)
++|...+.||+|+||+||+|+.. +++. ||+|.++... ....++|.+|++++++++||||++++++|.+
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------ 88 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------ 88 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES------
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec------
Confidence 45778899999999999999964 3443 6888876433 2345789999999999999999999999975
Q ss_pred CCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccC
Q 006145 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (659)
Q Consensus 551 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 630 (659)
...++|+||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 89 --~~~~~v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Df 161 (327)
T 3poz_A 89 --STVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDF 161 (327)
T ss_dssp --SSEEEEEECCTTCBHHHHHHHS--TTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCT
T ss_pred --CCeEEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccC
Confidence 3478999999999999999853 24699999999999999999999998 9999999999999999999999999
Q ss_pred ccccccccccc---cceecccccccCCCCC
Q 006145 631 NLPLLAENAEK---VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~~~~~---~~~~~gt~~y~aPE~~ 657 (659)
|+++....... .....+|+.|+|||+.
T Consensus 162 g~a~~~~~~~~~~~~~~~~~t~~y~aPE~~ 191 (327)
T 3poz_A 162 GLAKLLGAEEKEYHAEGGKVPIKWMALESI 191 (327)
T ss_dssp THHHHHTTTCC-------CCCGGGSCHHHH
T ss_pred cceeEccCCcccccccCCCccccccChHHh
Confidence 99976643322 2345678899999974
No 191
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.94 E-value=3.4e-28 Score=249.31 Aligned_cols=171 Identities=19% Similarity=0.353 Sum_probs=147.5
Q ss_pred hhcCCCCCceeccCcCceEEEEEecC-CcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCc
Q 006145 475 ATNNFDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 475 ~~~~~~~~~~ig~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
..++|...+.||+|+||.||+|+... +..||||.+.... ...+++.+|++++++++||||+++++++.+ .+
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~~ 82 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-------EP 82 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECS-------SS
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEcc-------CC
Confidence 45678888999999999999999764 8899999997543 345779999999999999999999999875 45
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCccc
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla 633 (659)
..++||||+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 83 ~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~ 158 (288)
T 3kfa_A 83 PFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 158 (288)
T ss_dssp SEEEEEECCTTEEHHHHHHHC-CTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGG
T ss_pred CEEEEEEcCCCCcHHHHHHhc-ccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccc
Confidence 689999999999999999753 235699999999999999999999998 9999999999999999999999999999
Q ss_pred cccccccc--cceecccccccCCCCC
Q 006145 634 LLAENAEK--VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 634 ~~~~~~~~--~~~~~gt~~y~aPE~~ 657 (659)
+....... .....+|+.|+|||+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~ 184 (288)
T 3kfa_A 159 RLMTGDTYTAHAGAKFPIKWTAPESL 184 (288)
T ss_dssp GTSCSSSSEEETTEEECGGGCCHHHH
T ss_pred eeccCCccccccCCccccCcCChhhh
Confidence 87654332 2445678899999964
No 192
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.94 E-value=6.9e-28 Score=252.08 Aligned_cols=171 Identities=19% Similarity=0.329 Sum_probs=145.8
Q ss_pred cCCCCCceeccCcCceEEEEEe-----cCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCC
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRL-----KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 551 (659)
++|...+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++... .
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~ 97 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGP-----G 97 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----S
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC-----C
Confidence 5677889999999999999984 35889999999766544456799999999999999999999998742 2
Q ss_pred CceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCc
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 631 (659)
....++||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg 172 (327)
T 3lxl_A 98 RQSLRLVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFG 172 (327)
T ss_dssp SCEEEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGG
T ss_pred CceEEEEEeecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccc
Confidence 45689999999999999999752 23589999999999999999999998 99999999999999999999999999
Q ss_pred cccccccccc----cceecccccccCCCCC
Q 006145 632 LPLLAENAEK----VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 632 la~~~~~~~~----~~~~~gt~~y~aPE~~ 657 (659)
+++....... .....||..|+|||+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 202 (327)
T 3lxl_A 173 LAKLLPLDKDYYVVREPGQSPIFWYAPESL 202 (327)
T ss_dssp GCEECCTTCSEEECSSCCCSCGGGSCHHHH
T ss_pred cceecccCCccceeeccCCccccccCHHHh
Confidence 9986643322 2345688889999964
No 193
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.94 E-value=3.5e-28 Score=253.70 Aligned_cols=182 Identities=13% Similarity=0.262 Sum_probs=132.1
Q ss_pred HHHhhcCCCCCceeccCcCceEEEEEecC-C---cEEEEEEecccC--CCchHHHHHHHHHHhCCCCCCccceeeeeeec
Q 006145 472 LEEATNNFDTSAFMGEGSQGQMYRGRLKN-G---TFVAIRCLKMKK--CHSTRNFMHHIELISKLRHRHLVSALGHCFEC 545 (659)
Q Consensus 472 l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~-g---~~vavK~l~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~ 545 (659)
+....++|...+.||+|+||.||+|+... + ..||||+++... ....++|.+|++++++++||||+++++++...
T Consensus 18 ~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 97 (323)
T 3qup_A 18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRS 97 (323)
T ss_dssp TBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC
T ss_pred cccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecc
Confidence 33456789999999999999999999654 3 279999997653 22346799999999999999999999999762
Q ss_pred cccCCCCceeEEEEeccCCCChhhhhcCC---CCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCC
Q 006145 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEG---HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN 622 (659)
Q Consensus 546 ~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~---~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~ 622 (659)
... ......++||||+++|+|.+++... .....+++..+..++.|+++||+|||+. +|+||||||+||+++++
T Consensus 98 ~~~-~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~ 173 (323)
T 3qup_A 98 RAK-GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAED 173 (323)
T ss_dssp --------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTT
T ss_pred ccc-cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCC
Confidence 211 0012248999999999999998632 1123689999999999999999999998 99999999999999999
Q ss_pred cceEEccCccccccccccc---cceecccccccCCCCC
Q 006145 623 LVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 623 ~~~kl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~ 657 (659)
+.+||+|||+++....... .....+++.|+|||+.
T Consensus 174 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~ 211 (323)
T 3qup_A 174 MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESL 211 (323)
T ss_dssp SCEEECCCCC-----------------CCGGGCCHHHH
T ss_pred CCEEEeeccccccccccccccccccccCcccccCchhh
Confidence 9999999999976643322 2345577889999964
No 194
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.94 E-value=9.6e-28 Score=245.22 Aligned_cols=174 Identities=21% Similarity=0.374 Sum_probs=147.3
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccC-----
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDD----- 549 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~----- 549 (659)
..+|...+.||+|+||.||+|+.. +|+.||||+++... +.+.+|++++++++||||+++++++.....+.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 456888899999999999999976 69999999997533 46789999999999999999999886422110
Q ss_pred ----CCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcce
Q 006145 550 ----SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVA 625 (659)
Q Consensus 550 ----~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~ 625 (659)
......++||||+++|+|.++++... ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCE
Confidence 11345799999999999999997421 24689999999999999999999998 99999999999999999999
Q ss_pred EEccCccccccccccccceecccccccCCCCC
Q 006145 626 KISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 626 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
||+|||+++............||+.|+|||+.
T Consensus 162 kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~ 193 (284)
T 2a19_B 162 KIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQI 193 (284)
T ss_dssp EECCCTTCEESSCCSCCCCCCSCCTTSCHHHH
T ss_pred EECcchhheeccccccccccCCcccccChhhh
Confidence 99999999877665555667899999999964
No 195
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.94 E-value=3.4e-27 Score=240.20 Aligned_cols=170 Identities=21% Similarity=0.305 Sum_probs=147.2
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCC-CchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
.++|+..+.||+|+||.||+|+.. +++.||||.+..... ...+.+.+|+++++.++||||+++++++.+ .+
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~ 78 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-------GN 78 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-------TT
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEc-------CC
Confidence 356788899999999999999976 699999999975443 334679999999999999999999999976 46
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCccc
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla 633 (659)
..++||||+++|+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 152 (276)
T 2yex_A 79 IQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLA 152 (276)
T ss_dssp EEEEEEECCTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEEecCCCcHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCc
Confidence 78999999999999999975 24689999999999999999999998 9999999999999999999999999999
Q ss_pred cccccc---cccceecccccccCCCCCC
Q 006145 634 LLAENA---EKVGHVIPYSGSIDPTNSA 658 (659)
Q Consensus 634 ~~~~~~---~~~~~~~gt~~y~aPE~~~ 658 (659)
...... .......||+.|+|||+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 180 (276)
T 2yex_A 153 TVFRYNNRERLLNKMCGTLPYVAPELLK 180 (276)
T ss_dssp EECEETTEECCBCCCCSCGGGCCGGGGT
T ss_pred cccCCCcchhcccCCccccCccChHHHh
Confidence 765322 2234568999999999863
No 196
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.94 E-value=1.3e-27 Score=246.80 Aligned_cols=171 Identities=22% Similarity=0.367 Sum_probs=142.3
Q ss_pred cCCCCCceeccCcCceEEEEEe-----cCCcEEEEEEecccCC-CchHHHHHHHHHHhCCCCCCccceeeeeeeccccCC
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRL-----KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 550 (659)
+.|...+.||+|+||.||+|++ .+++.||||+++.... ...+++.+|++++++++||||+++++++...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 95 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED----- 95 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC-----
Confidence 3467789999999999999984 3589999999975432 3447799999999999999999999999762
Q ss_pred CCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccC
Q 006145 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (659)
Q Consensus 551 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 630 (659)
.....++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 96 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Df 170 (302)
T 4e5w_A 96 GGNGIKLIMEFLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDF 170 (302)
T ss_dssp --CCEEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCC
T ss_pred CCceEEEEEEeCCCCcHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcc
Confidence 135689999999999999999642 24689999999999999999999998 9999999999999999999999999
Q ss_pred ccccccccccc----cceecccccccCCCCC
Q 006145 631 NLPLLAENAEK----VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~~~~~----~~~~~gt~~y~aPE~~ 657 (659)
|+++....... .....||..|+|||+.
T Consensus 171 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 201 (302)
T 4e5w_A 171 GLTKAIETDKEYYTVKDDRDSPVFWYAPECL 201 (302)
T ss_dssp TTCEECCTTCCEEECCCCTTCCGGGCCHHHH
T ss_pred cccccccCCCcceeccCCCCCCccccCCeee
Confidence 99977654332 2345688889999964
No 197
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.94 E-value=5.5e-28 Score=254.56 Aligned_cols=175 Identities=15% Similarity=0.166 Sum_probs=141.5
Q ss_pred HHhhcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccC-----CCchHHHHHHHHHHhCCCCCCccceeeeeeecc
Q 006145 473 EEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK-----CHSTRNFMHHIELISKLRHRHLVSALGHCFECY 546 (659)
Q Consensus 473 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~-----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~ 546 (659)
....++|...+.||+|+||.||+|+.. +++.||||++.... ....+++.+|++++++++||||++++++|.+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-- 99 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED-- 99 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC--
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc--
Confidence 445677899999999999999999965 58899999996532 2334679999999999999999999999976
Q ss_pred ccCCCCceeEEEEeccCCCChhhhhcCCC-------------------------------------CCCCCCHHHHHHHH
Q 006145 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGH-------------------------------------AHQSLTWTQRISAA 589 (659)
Q Consensus 547 ~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~-------------------------------------~~~~l~~~~~~~i~ 589 (659)
.+..++||||+++|+|.+++.... ....+++..+..++
T Consensus 100 -----~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 174 (345)
T 3hko_A 100 -----EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIM 174 (345)
T ss_dssp -----SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHH
T ss_pred -----CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHH
Confidence 567899999999999999985200 01123567788999
Q ss_pred HHHHHHhhhhcCCCCCCccccCCCCCceeecCCc--ceEEccCcccccccccc-----ccceecccccccCCCCC
Q 006145 590 IGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL--VAKISSYNLPLLAENAE-----KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 590 ~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~--~~kl~DFGla~~~~~~~-----~~~~~~gt~~y~aPE~~ 657 (659)
.|+++||+|||+. +|+||||||+||+++.++ .+||+|||+++...... ......||+.|+|||+.
T Consensus 175 ~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 246 (345)
T 3hko_A 175 RQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVL 246 (345)
T ss_dssp HHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHH
T ss_pred HHHHHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhh
Confidence 9999999999998 999999999999998776 89999999997653211 23567899999999975
No 198
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.94 E-value=1.2e-27 Score=242.20 Aligned_cols=169 Identities=21% Similarity=0.335 Sum_probs=145.9
Q ss_pred hcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCcee
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~ 555 (659)
.++|...+.||+|+||.||+|+..+++.||+|++..... ..+++.+|++++++++||||+++++++.+ .+..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~ 78 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLE-------QAPI 78 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECS-------SSSC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcc-------CCCe
Confidence 356777899999999999999988889999999976543 35789999999999999999999999975 4568
Q ss_pred EEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCccccc
Q 006145 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (659)
Q Consensus 556 ~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~ 635 (659)
++||||+++|+|.++++.. ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 79 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 153 (267)
T 3t9t_A 79 CLVTEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRF 153 (267)
T ss_dssp EEEECCCTTCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGG
T ss_pred EEEEeCCCCCcHHHHHhhC--cccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccc
Confidence 9999999999999999753 24689999999999999999999998 999999999999999999999999999976
Q ss_pred ccccc--ccceecccccccCCCCC
Q 006145 636 AENAE--KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 636 ~~~~~--~~~~~~gt~~y~aPE~~ 657 (659)
..... ......++..|+|||+.
T Consensus 154 ~~~~~~~~~~~~~~~~~y~aPE~~ 177 (267)
T 3t9t_A 154 VLDDQYTSSTGTKFPVKWASPEVF 177 (267)
T ss_dssp BCCHHHHSTTSTTCCGGGCCHHHH
T ss_pred cccccccccccccccccccChhhh
Confidence 64322 22345678899999964
No 199
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=1.9e-27 Score=249.50 Aligned_cols=172 Identities=19% Similarity=0.339 Sum_probs=141.1
Q ss_pred hhcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCC--CCCCccceeeeeeeccccCCCC
Q 006145 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKL--RHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 475 ~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l--~H~niv~l~g~~~~~~~~~~~~ 552 (659)
..++|...+.||+|+||.||+|+.. |+.||||++... ....+.+|.+++... +||||+++++++..... ..
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~---~~ 107 (337)
T 3mdy_A 35 IAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTG---SW 107 (337)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG---GG
T ss_pred cccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC---CC
Confidence 4567999999999999999999976 899999998643 234566677776665 89999999999986321 12
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCC-----CCCccccCCCCCceeecCCcceEE
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI-----VPGVFSNNLKITDILLDQNLVAKI 627 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----~~~iiHrDlk~~NILld~~~~~kl 627 (659)
...++||||+++|+|.++++. ..+++..+..++.|++.||+|||+.+ .++|+||||||+||+++.++.+||
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl 183 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI 183 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred CceEEEEeccCCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEE
Confidence 568999999999999999975 36999999999999999999999852 458999999999999999999999
Q ss_pred ccCcccccccccccc-----ceecccccccCCCCC
Q 006145 628 SSYNLPLLAENAEKV-----GHVIPYSGSIDPTNS 657 (659)
Q Consensus 628 ~DFGla~~~~~~~~~-----~~~~gt~~y~aPE~~ 657 (659)
+|||+++........ ...+||+.|+|||+.
T Consensus 184 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 218 (337)
T 3mdy_A 184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVL 218 (337)
T ss_dssp CCCTTCEECC---------CCSSCSCGGGCCHHHH
T ss_pred EeCCCceeeccccccccCCCCCCccCcceeChhhc
Confidence 999999765432221 345899999999975
No 200
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.94 E-value=1e-27 Score=248.83 Aligned_cols=173 Identities=23% Similarity=0.350 Sum_probs=145.5
Q ss_pred hhcCCCCCceeccCcCceEEEEEe------cCCcEEEEEEecccCC-CchHHHHHHHHHHhCC-CCCCccceeeeeeecc
Q 006145 475 ATNNFDTSAFMGEGSQGQMYRGRL------KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKL-RHRHLVSALGHCFECY 546 (659)
Q Consensus 475 ~~~~~~~~~~ig~G~~g~Vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~ 546 (659)
..++|...+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|+++++++ +||||++++++|..
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-- 98 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI-- 98 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec--
Confidence 346788889999999999999985 2478999999975543 2346799999999999 89999999999975
Q ss_pred ccCCCCceeEEEEeccCCCChhhhhcCCCC---------------CCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccC
Q 006145 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGHA---------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNN 611 (659)
Q Consensus 547 ~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~---------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrD 611 (659)
.+..++||||+++|+|.+++..... ...+++..+..++.|+++||+|||+. +|+|||
T Consensus 99 -----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~d 170 (313)
T 1t46_A 99 -----GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRD 170 (313)
T ss_dssp -----SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred -----CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCC
Confidence 4568999999999999999975321 12589999999999999999999998 999999
Q ss_pred CCCCceeecCCcceEEccCccccccccccc---cceecccccccCCCCC
Q 006145 612 LKITDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 612 lk~~NILld~~~~~kl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~ 657 (659)
|||+||++++++.+||+|||+++....... .....+|+.|+|||+.
T Consensus 171 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 219 (313)
T 1t46_A 171 LAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI 219 (313)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHH
T ss_pred CccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHh
Confidence 999999999999999999999977654332 2345678899999964
No 201
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.94 E-value=4.5e-28 Score=247.30 Aligned_cols=170 Identities=24% Similarity=0.382 Sum_probs=145.4
Q ss_pred hhcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCce
Q 006145 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (659)
Q Consensus 475 ~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 554 (659)
..++|...+.||+|+||.||+|+..++..||||.++... ...+++.+|++++++++||||+++++++.. +.
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--------~~ 81 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ--------EP 81 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS--------SS
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC--------CC
Confidence 456788889999999999999998888899999997544 345789999999999999999999998863 34
Q ss_pred eEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcccc
Q 006145 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (659)
Q Consensus 555 ~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~ 634 (659)
.++||||+++|+|.+++... ....+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 82 ~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 157 (279)
T 1qpc_A 82 IYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLAR 157 (279)
T ss_dssp CEEEEECCTTCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred cEEEEecCCCCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccc
Confidence 79999999999999999742 112689999999999999999999998 99999999999999999999999999997
Q ss_pred ccccccc--cceecccccccCCCCC
Q 006145 635 LAENAEK--VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 635 ~~~~~~~--~~~~~gt~~y~aPE~~ 657 (659)
....... .....++..|+|||+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~aPE~~ 182 (279)
T 1qpc_A 158 LIEDNEYTAREGAKFPIKWTAPEAI 182 (279)
T ss_dssp ECSSSCEECCTTCCCCTTTSCHHHH
T ss_pred cccCcccccccCCCCccCccChhhh
Confidence 7654322 2345577889999964
No 202
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.94 E-value=8.2e-28 Score=251.37 Aligned_cols=168 Identities=21% Similarity=0.336 Sum_probs=138.2
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcE----EEEEEecccC-CCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCC
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTF----VAIRCLKMKK-CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~----vavK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 550 (659)
++|...+.||+|+||+||+|+.. +++. ||+|.+.... ....+++.+|+.++++++||||++++++|.+
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 86 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG------ 86 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB------
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC------
Confidence 46777899999999999999964 4543 7888875443 2334568899999999999999999999853
Q ss_pred CCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccC
Q 006145 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (659)
Q Consensus 551 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 630 (659)
+..++||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 87 --~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Df 159 (325)
T 3kex_A 87 --SSLQLVTQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADF 159 (325)
T ss_dssp --SSEEEEEECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSC
T ss_pred --CccEEEEEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCC
Confidence 4589999999999999999853 24689999999999999999999998 9999999999999999999999999
Q ss_pred cccccccccc---ccceecccccccCCCCC
Q 006145 631 NLPLLAENAE---KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~~~~---~~~~~~gt~~y~aPE~~ 657 (659)
|+++...... ......+|..|+|||+.
T Consensus 160 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~ 189 (325)
T 3kex_A 160 GVADLLPPDDKQLLYSEAKTPIKWMALESI 189 (325)
T ss_dssp SGGGGSCCCTTCCC-----CCTTTSCHHHH
T ss_pred CcccccCcccccccccCCCCcccccChHHh
Confidence 9998764332 23456788899999974
No 203
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.94 E-value=1.1e-27 Score=244.94 Aligned_cols=169 Identities=19% Similarity=0.309 Sum_probs=132.6
Q ss_pred hcCCCCCceeccCcCceEEEEEecC----CcEEEEEEecccCCC-chHHHHHHHHHHhCCCCCCccceeeeeeeccccCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLKN----GTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 550 (659)
.++|...+.||+|+||.||+|+... +..||||.++..... ..+.|.+|++++++++||||+++++++.+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 87 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE------ 87 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS------
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc------
Confidence 4667888999999999999999642 567999998754322 23579999999999999999999998743
Q ss_pred CCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccC
Q 006145 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (659)
Q Consensus 551 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 630 (659)
+..++||||+++|+|.++++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 88 --~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 160 (281)
T 1mp8_A 88 --NPVWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDF 160 (281)
T ss_dssp --SSCEEEEECCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-
T ss_pred --CccEEEEecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcc
Confidence 4579999999999999999853 24689999999999999999999998 9999999999999999999999999
Q ss_pred ccccccccccc--cceecccccccCCCCC
Q 006145 631 NLPLLAENAEK--VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~~~~~--~~~~~gt~~y~aPE~~ 657 (659)
|+++....... .....+|+.|+|||+.
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 189 (281)
T 1mp8_A 161 GLSRYMEDSTYYKASKGKLPIKWMAPESI 189 (281)
T ss_dssp ------------------CCGGGCCHHHH
T ss_pred ccccccCcccccccccCCCcccccChhhc
Confidence 99977644332 2345677899999964
No 204
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.94 E-value=1.7e-25 Score=244.43 Aligned_cols=223 Identities=28% Similarity=0.366 Sum_probs=151.7
Q ss_pred CCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEc
Q 006145 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (659)
Q Consensus 107 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 186 (659)
++|++|++++|.+++. |.. .++|++|++++|++++ +| .++++++|++|++++|++++ +|..+ .+|++|++
T Consensus 111 ~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L 180 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAA 180 (454)
T ss_dssp TTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEEC
T ss_pred CCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEEC
Confidence 5777788877777652 211 1578888888888875 66 47888888888888888775 56543 47888888
Q ss_pred cCCcCCccCCcccCCCCCCcEEeccccccccCCCCCCCCCcCCEEEcccCCCCCCCCCC--CcccceEecCCCcCCccCc
Q 006145 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKV--GKKLVTMILSKNKFRSAIP 264 (659)
Q Consensus 187 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~~p 264 (659)
++|++++ +| .++++++|+.|++++|++++. |.+ .++|++|++++|.++ .+|.. +++|+.|++++|++++ +|
T Consensus 181 ~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l-~~~--~~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N~l~~-l~ 253 (454)
T 1jl5_A 181 GNNQLEE-LP-ELQNLPFLTAIYADNNSLKKL-PDL--PLSLESIVAGNNILE-ELPELQNLPFLTTIYADNNLLKT-LP 253 (454)
T ss_dssp CSSCCSS-CC-CCTTCTTCCEEECCSSCCSSC-CCC--CTTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSSCCSS-CC
T ss_pred cCCcCCc-Cc-cccCCCCCCEEECCCCcCCcC-CCC--cCcccEEECcCCcCC-cccccCCCCCCCEEECCCCcCCc-cc
Confidence 8888876 55 577888888888888887763 332 247888888888777 44443 4677888888888876 44
Q ss_pred hhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCC--cCCcCCC-------------CC-CCCCEEECcC
Q 006145 265 AEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG--KLFDDLS-------------CN-PELGFVDLSS 328 (659)
Q Consensus 265 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~--~~p~~~~-------------~~-~~L~~L~ls~ 328 (659)
.. +++|+.|++++|++++ +|.. +++|+.|++++|++++ .+|..+. .+ ++|+.|++++
T Consensus 254 ~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~ 326 (454)
T 1jl5_A 254 DL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSN 326 (454)
T ss_dssp SC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCS
T ss_pred cc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEECCC
Confidence 32 3678888888888875 4543 3567777777777766 3332221 12 4677777777
Q ss_pred CCCcccCChhhhCCCCCCEEEcCCccccC
Q 006145 329 NLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (659)
Q Consensus 329 N~l~g~ip~~~~~~~~l~~l~~~~N~l~~ 357 (659)
|++++ +|.. +++++.+++++|.++.
T Consensus 327 N~l~~-lp~~---~~~L~~L~L~~N~l~~ 351 (454)
T 1jl5_A 327 NKLIE-LPAL---PPRLERLIASFNHLAE 351 (454)
T ss_dssp SCCSC-CCCC---CTTCCEEECCSSCCSC
T ss_pred Ccccc-cccc---CCcCCEEECCCCcccc
Confidence 77775 5654 3567788888887774
No 205
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.94 E-value=2.2e-27 Score=244.18 Aligned_cols=169 Identities=18% Similarity=0.263 Sum_probs=146.1
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC---chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 551 (659)
.++|...+.||+|+||.||+|+.. +++.||+|.+...... ..+.+.+|++++++++||||+++++++.+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------- 86 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED------- 86 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeecc-------
Confidence 356778899999999999999976 4889999999755322 23568999999999999999999999975
Q ss_pred CceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCc
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 631 (659)
.+..++||||+++++|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 87 ~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 160 (294)
T 2rku_A 87 NDFVFVVLELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFG 160 (294)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CCEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEecc
Confidence 56789999999999999998752 4689999999999999999999998 99999999999999999999999999
Q ss_pred ccccccc-ccccceecccccccCCCCC
Q 006145 632 LPLLAEN-AEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 632 la~~~~~-~~~~~~~~gt~~y~aPE~~ 657 (659)
+++.... ........||+.|+|||+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~y~aPE~~ 187 (294)
T 2rku_A 161 LATKVEYDGERKKVLCGTPNYIAPEVL 187 (294)
T ss_dssp TCEECCSTTCCBCCCCSCCSSCCHHHH
T ss_pred CceecccCccccccccCCCCcCCcchh
Confidence 9976642 2334556799999999974
No 206
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=2.8e-26 Score=258.52 Aligned_cols=268 Identities=23% Similarity=0.258 Sum_probs=172.5
Q ss_pred CCCCCCCCCCCcCCCCC---CCceEeCCCCEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCc
Q 006145 49 LSSWNITTEFCNTEPTS---SLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSG 125 (659)
Q Consensus 49 l~~W~~~~~~C~w~~~~---~~gv~C~~~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~ 125 (659)
+++|....+||.|.+.. .....|....++.|++++++++ .+|..+ . ++|++|+|++|.++. +|.
T Consensus 12 w~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l---------~--~~L~~L~L~~N~l~~-lp~ 78 (622)
T 3g06_A 12 WSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCL---------P--AHITTLVIPDNNLTS-LPA 78 (622)
T ss_dssp HHHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCC---------C--TTCSEEEECSCCCSC-CCC
T ss_pred HHHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhh---------C--CCCcEEEecCCCCCC-CCC
Confidence 45687777889885300 0123444456889999988876 444321 1 455555555555543 332
Q ss_pred ccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCC
Q 006145 126 KISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENL 205 (659)
Q Consensus 126 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 205 (659)
.+++|++|+|++|+|+ .+|. .+++|++|+|++|.+++ +|. .+++|+.|++++|++++ +|.. +++|
T Consensus 79 ---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L 143 (622)
T 3g06_A 79 ---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGL 143 (622)
T ss_dssp ---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTC
T ss_pred ---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCC
Confidence 3455555555555555 2333 44555555555555543 232 33445555555555542 3322 2444
Q ss_pred cEEeccccccccCCCCC-----------------CCCCcCCEEEcccCCCCCCCCCCCcccceEecCCCcCCccCchhcc
Q 006145 206 RVLALSNNHFYGEVPDF-----------------SGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVS 268 (659)
Q Consensus 206 ~~L~Ls~N~l~~~~p~~-----------------~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~ 268 (659)
++|+|++|++++.++.+ ..+++|+.|+|++|.+++ +|...++|+.|++++|.++. +|.
T Consensus 144 ~~L~Ls~N~l~~l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~-l~~--- 218 (622)
T 3g06_A 144 QELSVSDNQLASLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS-LPTLPSELYKLWAYNNRLTS-LPA--- 218 (622)
T ss_dssp CEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSS-CCC---
T ss_pred CEEECcCCcCCCcCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC-CCCccchhhEEECcCCcccc-cCC---
Confidence 55555555444322111 234777888888888775 44456778888888888874 443
Q ss_pred CCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEE
Q 006145 269 SYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVV 348 (659)
Q Consensus 269 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l 348 (659)
.+++|+.|+|++|+|++ +| ..+++|+.|+|++|+|+. +|. .+++|+.|+|++|+|+ .+|..+..+++++.+
T Consensus 219 ~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L 289 (622)
T 3g06_A 219 LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTV 289 (622)
T ss_dssp CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEE
T ss_pred CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEE
Confidence 24789999999999986 56 566899999999999984 555 5688999999999999 889999999999999
Q ss_pred EcCCccccCC
Q 006145 349 LYARNCLAAG 358 (659)
Q Consensus 349 ~~~~N~l~~~ 358 (659)
++++|.+++.
T Consensus 290 ~L~~N~l~~~ 299 (622)
T 3g06_A 290 NLEGNPLSER 299 (622)
T ss_dssp ECCSCCCCHH
T ss_pred EecCCCCCCc
Confidence 9999998764
No 207
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.94 E-value=1.5e-27 Score=250.46 Aligned_cols=169 Identities=18% Similarity=0.263 Sum_probs=146.5
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC---chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 551 (659)
.++|...+.||+|+||.||+++.. +++.||+|.+...... ..+.+.+|++++++++||||+++++++.+
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------- 112 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED------- 112 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-------
Confidence 466888899999999999999976 4889999999754322 23568999999999999999999999976
Q ss_pred CceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCc
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 631 (659)
.+..++||||+++++|.+++... ..+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 113 ~~~~~lv~e~~~~~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg 186 (335)
T 2owb_A 113 NDFVFVVLELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFG 186 (335)
T ss_dssp SSEEEEEECCCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCT
T ss_pred CCeEEEEEecCCCCCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeecc
Confidence 46789999999999999998752 4689999999999999999999998 99999999999999999999999999
Q ss_pred ccccccc-ccccceecccccccCCCCC
Q 006145 632 LPLLAEN-AEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 632 la~~~~~-~~~~~~~~gt~~y~aPE~~ 657 (659)
+++.... ........||+.|+|||+.
T Consensus 187 ~~~~~~~~~~~~~~~~gt~~y~aPE~~ 213 (335)
T 2owb_A 187 LATKVEYDGERKKVLCGTPNYIAPEVL 213 (335)
T ss_dssp TCEECCSTTCCBCCCCSCCSSCCHHHH
T ss_pred CceecccCcccccccCCCccccCHHHh
Confidence 9976642 2334557899999999964
No 208
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.94 E-value=1.3e-27 Score=251.72 Aligned_cols=167 Identities=14% Similarity=0.271 Sum_probs=139.5
Q ss_pred hcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCC--chHHHHHHHHHHhCCCC--CCccceeeeeeeccccCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRH--RHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~H--~niv~l~g~~~~~~~~~~~ 551 (659)
.++|...+.||+|+||.||+|+..+++.||||++...... ..+++.+|++++.+++| +||+++++++.+
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~------- 80 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT------- 80 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-------
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEee-------
Confidence 3457788999999999999999888999999999755432 23679999999999986 999999999976
Q ss_pred CceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCc
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 631 (659)
....++||| +.+|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+|||++ ++.+||+|||
T Consensus 81 ~~~~~lv~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG 152 (343)
T 3dbq_A 81 DQYIYMVME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFG 152 (343)
T ss_dssp SSEEEEEEC-CCSEEHHHHHHHS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCS
T ss_pred CCEEEEEEe-CCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecc
Confidence 567899999 5688999999863 4689999999999999999999998 999999999999997 6789999999
Q ss_pred cccccccccc---cceecccccccCCCCC
Q 006145 632 LPLLAENAEK---VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 632 la~~~~~~~~---~~~~~gt~~y~aPE~~ 657 (659)
+++....... ....+||+.|+|||+.
T Consensus 153 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~ 181 (343)
T 3dbq_A 153 IANQMQPDTTSVVKDSQVGTVNYMPPEAI 181 (343)
T ss_dssp SSCCC------------CCCCSSCCHHHH
T ss_pred cccccCcccccccCCCCcCCcCcCCHHHH
Confidence 9987643322 2456899999999974
No 209
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.94 E-value=1.4e-27 Score=242.40 Aligned_cols=169 Identities=20% Similarity=0.355 Sum_probs=132.4
Q ss_pred hcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCC----CchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKC----HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 551 (659)
.++|...+.||+|+||.||+|+.. |+.||||+++.... ...+.+.+|+++++.++||||++++++|.+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 77 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK------- 77 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECC-------
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-------
Confidence 356778899999999999999975 89999999875432 224679999999999999999999999975
Q ss_pred CceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecC--------Cc
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ--------NL 623 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~--------~~ 623 (659)
.+..++||||+++|+|.+++.. ..+++..+..++.|+++||+|||+....+|+||||||+||++++ ++
T Consensus 78 ~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~ 153 (271)
T 3dtc_A 78 EPNLCLVMEFARGGPLNRVLSG----KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNK 153 (271)
T ss_dssp C--CEEEEECCTTEEHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSC
T ss_pred CCceEEEEEcCCCCCHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCc
Confidence 4568999999999999999964 46899999999999999999999982233999999999999986 67
Q ss_pred ceEEccCccccccccccccceecccccccCCCCC
Q 006145 624 VAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 624 ~~kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
.+||+|||+++...... .....||+.|+|||+.
T Consensus 154 ~~kl~Dfg~~~~~~~~~-~~~~~~~~~y~aPE~~ 186 (271)
T 3dtc_A 154 ILKITDFGLAREWHRTT-KMSAAGAYAWMAPEVI 186 (271)
T ss_dssp CEEECCCCC--------------CCGGGSCHHHH
T ss_pred ceEEccCCccccccccc-ccCCCCccceeCHHHh
Confidence 89999999997664432 2356799999999963
No 210
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.94 E-value=2.2e-27 Score=245.51 Aligned_cols=169 Identities=19% Similarity=0.362 Sum_probs=143.7
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCce
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 554 (659)
.++|...+.||+|+||.||+|+.. +|+.||||.++.......+.+.+|++++++++||||+++++++.+ .+.
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~ 80 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYES-------TTH 80 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEEC-------SSE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhccc-------CCE
Confidence 356778899999999999999975 699999999986554445679999999999999999999999875 567
Q ss_pred eEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceee---cCCcceEEccCc
Q 006145 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL---DQNLVAKISSYN 631 (659)
Q Consensus 555 ~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---d~~~~~kl~DFG 631 (659)
.++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++ ++++.+||+|||
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg 154 (304)
T 2jam_A 81 YYLVMQLVSGGELFDRILER---GVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFG 154 (304)
T ss_dssp EEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCS
T ss_pred EEEEEEcCCCccHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCC
Confidence 89999999999999998752 4689999999999999999999998 99999999999999 778999999999
Q ss_pred cccccccccccceecccccccCCCCCC
Q 006145 632 LPLLAENAEKVGHVIPYSGSIDPTNSA 658 (659)
Q Consensus 632 la~~~~~~~~~~~~~gt~~y~aPE~~~ 658 (659)
+++..... ......||+.|+|||+..
T Consensus 155 ~~~~~~~~-~~~~~~~~~~y~aPE~~~ 180 (304)
T 2jam_A 155 LSKMEQNG-IMSTACGTPGYVAPEVLA 180 (304)
T ss_dssp TTCCCCCB-TTHHHHSCCCBCCTTTBS
T ss_pred cceecCCC-ccccccCCCCccChHHhc
Confidence 99765432 334567999999999863
No 211
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.94 E-value=2.9e-28 Score=254.13 Aligned_cols=180 Identities=20% Similarity=0.322 Sum_probs=148.8
Q ss_pred CHHHHHHhhcCCCCCceeccCcCceEEEEEec------CCcEEEEEEecccCCC-chHHHHHHHHHHhCCCCCCccceee
Q 006145 468 SLEELEEATNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALG 540 (659)
Q Consensus 468 ~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g 540 (659)
..+++....++|...+.||+|+||.||+|+.. +++.||||.+...... ...+|.+|++++++++||||+++++
T Consensus 16 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 95 (322)
T 1p4o_A 16 VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG 95 (322)
T ss_dssp CCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEE
T ss_pred ChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEE
Confidence 33455556788999999999999999999854 3788999999754322 2356999999999999999999999
Q ss_pred eeeeccccCCCCceeEEEEeccCCCChhhhhcCCC-------CCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCC
Q 006145 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGH-------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLK 613 (659)
Q Consensus 541 ~~~~~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~-------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk 613 (659)
++.+ .+..++||||+++|+|.++++... ....+++..+..++.|+++||+|||+. +|+|||||
T Consensus 96 ~~~~-------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dik 165 (322)
T 1p4o_A 96 VVSQ-------GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLA 165 (322)
T ss_dssp EECS-------SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCS
T ss_pred EEcc-------CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCc
Confidence 9975 456899999999999999987421 124579999999999999999999998 99999999
Q ss_pred CCceeecCCcceEEccCcccccccccc---ccceecccccccCCCCC
Q 006145 614 ITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 614 ~~NILld~~~~~kl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~ 657 (659)
|+||+++.++.+||+|||+++...... ......+|+.|+|||+.
T Consensus 166 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 212 (322)
T 1p4o_A 166 ARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 212 (322)
T ss_dssp GGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHH
T ss_pred cceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhh
Confidence 999999999999999999997654322 12345678899999964
No 212
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=4.1e-26 Score=232.00 Aligned_cols=166 Identities=27% Similarity=0.302 Sum_probs=99.6
Q ss_pred CCCCcCCCCCCCceEeCCCCEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcE
Q 006145 56 TEFCNTEPTSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEI 135 (659)
Q Consensus 56 ~~~C~w~~~~~~gv~C~~~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 135 (659)
.++|.|.| ....|. ..++.+++++++++. +|. .+. ++|+.|+|++|++++..+..|.++++|++
T Consensus 2 ~~~C~~~~---~~C~c~-~~~~~l~~~~~~l~~-ip~---------~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~ 65 (270)
T 2o6q_A 2 EALCKKDG---GVCSCN-NNKNSVDCSSKKLTA-IPS---------NIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRL 65 (270)
T ss_dssp CCCBGGGT---CSBEEE-TTTTEEECTTSCCSS-CCS---------CCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCE
T ss_pred CccCCCCC---CCCEeC-CCCCEEEccCCCCCc-cCC---------CCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCE
Confidence 47899975 234443 346678888776653 332 111 35677777777776666666777777777
Q ss_pred EEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEecccccc
Q 006145 136 LNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHF 215 (659)
Q Consensus 136 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 215 (659)
|+|++|.++...+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|++
T Consensus 66 L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 145 (270)
T 2o6q_A 66 LYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNEL 145 (270)
T ss_dssp EECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcC
Confidence 77777777654444456666666666666666655555566666666666666666655555556666666666666655
Q ss_pred ccCCCC-CCCCCcCCEEEcccCC
Q 006145 216 YGEVPD-FSGLTYLQVLDLENNA 237 (659)
Q Consensus 216 ~~~~p~-~~~l~~L~~L~L~~N~ 237 (659)
++.++. |..+++|++|+|++|.
T Consensus 146 ~~~~~~~~~~l~~L~~L~L~~n~ 168 (270)
T 2o6q_A 146 QSLPKGVFDKLTSLKELRLYNNQ 168 (270)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSC
T ss_pred CccCHhHccCCcccceeEecCCc
Confidence 544433 4444444444444433
No 213
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.94 E-value=2e-27 Score=249.43 Aligned_cols=173 Identities=20% Similarity=0.406 Sum_probs=143.8
Q ss_pred hhcCCCCCceeccCcCceEEEEEec--------CCcEEEEEEecccCCC-chHHHHHHHHHHhCC-CCCCccceeeeeee
Q 006145 475 ATNNFDTSAFMGEGSQGQMYRGRLK--------NGTFVAIRCLKMKKCH-STRNFMHHIELISKL-RHRHLVSALGHCFE 544 (659)
Q Consensus 475 ~~~~~~~~~~ig~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~-~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~ 544 (659)
..++|...+.||+|+||.||+|+.. ++..||||+++..... ..+++.+|+++++++ +||||++++++|..
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 3567888899999999999999863 4778999999754322 345799999999999 89999999999975
Q ss_pred ccccCCCCceeEEEEeccCCCChhhhhcCCCC-------------CCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccC
Q 006145 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHA-------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNN 611 (659)
Q Consensus 545 ~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrD 611 (659)
.+..++||||+++|+|.+++..... ...+++..+..++.|+++||+|||+. +|+|||
T Consensus 113 -------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~D 182 (334)
T 2pvf_A 113 -------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRD 182 (334)
T ss_dssp -------SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred -------CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCC
Confidence 4568999999999999999985321 13489999999999999999999998 999999
Q ss_pred CCCCceeecCCcceEEccCccccccccccc---cceecccccccCCCCC
Q 006145 612 LKITDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 612 lk~~NILld~~~~~kl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~ 657 (659)
|||+||+++.++.+||+|||+++....... .....+|+.|+|||+.
T Consensus 183 lkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 231 (334)
T 2pvf_A 183 LAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 231 (334)
T ss_dssp CSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHH
T ss_pred CccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHh
Confidence 999999999999999999999976644322 2345678899999964
No 214
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.94 E-value=3.4e-27 Score=247.54 Aligned_cols=172 Identities=20% Similarity=0.408 Sum_probs=138.5
Q ss_pred hcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHH--HhCCCCCCccceeeeeeeccccCCCCc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIEL--ISKLRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~--l~~l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
.++|...+.||+|+||.||+|+. +++.||||++.... ..++..|.++ +..++||||+++++++.....+ ...
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~--~~~ 85 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTAD--GRM 85 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTT--SCE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccC--CCc
Confidence 45788889999999999999987 58999999997433 3445555555 4458999999999877542221 244
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCC------CCCccccCCCCCceeecCCcceEE
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI------VPGVFSNNLKITDILLDQNLVAKI 627 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~------~~~iiHrDlk~~NILld~~~~~kl 627 (659)
..++||||+++|+|.+++.. ...+|..+..++.|+++||+|||+.+ .++|+||||||+|||++.++.+||
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSL----HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred eEEEEEecCCCCcHHHHHhh----cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEE
Confidence 67899999999999999975 34689999999999999999999863 348999999999999999999999
Q ss_pred ccCcccccccccc---------ccceecccccccCCCCC
Q 006145 628 SSYNLPLLAENAE---------KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 628 ~DFGla~~~~~~~---------~~~~~~gt~~y~aPE~~ 657 (659)
+|||+++...... .....+||+.|+|||+.
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 200 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVL 200 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHH
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhh
Confidence 9999997654321 12345799999999975
No 215
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=3.2e-28 Score=253.59 Aligned_cols=241 Identities=23% Similarity=0.225 Sum_probs=207.7
Q ss_pred ccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCC
Q 006145 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILA 182 (659)
Q Consensus 103 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 182 (659)
+..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..| +..+++|++|+|++|++++. | ..++|+
T Consensus 30 ~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l-~----~~~~L~ 102 (317)
T 3o53_A 30 RQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQEL-L----VGPSIE 102 (317)
T ss_dssp HTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEE-E----ECTTCC
T ss_pred hccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccc-c----CCCCcC
Confidence 4467799999999999999888999999999999999999997665 89999999999999999753 2 348999
Q ss_pred EEEccCCcCCccCCcccCCCCCCcEEeccccccccCCC-CCCCCCcCCEEEcccCCCCCCCCCC----CcccceEecCCC
Q 006145 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP-DFSGLTYLQVLDLENNALGPQFPKV----GKKLVTMILSKN 257 (659)
Q Consensus 183 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~----~~~L~~L~l~~N 257 (659)
+|++++|.+++..+. .+++|+.|++++|++++..+ .+..+++|++|+|++|.+++..+.. +++|++|++++|
T Consensus 103 ~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N 179 (317)
T 3o53_A 103 TLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYN 179 (317)
T ss_dssp EEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTS
T ss_pred EEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCC
Confidence 999999999976554 36789999999999998877 4888999999999999998866543 478999999999
Q ss_pred cCCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCc-ccCC
Q 006145 258 KFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT-GQLP 336 (659)
Q Consensus 258 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~-g~ip 336 (659)
.+++. | ....+++|+.|+|++|++++ +|..+..+++|+.|++++|+++ .+|..+..+++|+.|++++|.++ +.+|
T Consensus 180 ~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~ 255 (317)
T 3o53_A 180 FIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLR 255 (317)
T ss_dssp CCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHH
T ss_pred cCccc-c-cccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHH
Confidence 99876 3 33458999999999999996 4555999999999999999999 46888999999999999999999 8888
Q ss_pred hhhhCCCCCCEEEcCCc-cccC
Q 006145 337 NCLLAGSKNRVVLYARN-CLAA 357 (659)
Q Consensus 337 ~~~~~~~~l~~l~~~~N-~l~~ 357 (659)
..+..+++++.+++.++ .+.+
T Consensus 256 ~~~~~~~~L~~l~l~~~~~l~~ 277 (317)
T 3o53_A 256 DFFSKNQRVQTVAKQTVKKLTG 277 (317)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHS
T ss_pred HHHhccccceEEECCCchhccC
Confidence 88888888888887743 4554
No 216
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.94 E-value=3.6e-27 Score=244.68 Aligned_cols=170 Identities=11% Similarity=0.224 Sum_probs=139.9
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCc---hHHHHHHHHHHhCCCCCCccceeeeeeeccccCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS---TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~---~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 551 (659)
.++|...+.||+|+||.||+|+.. +++.||||++....... .+++.+|++++++++||||+++++++..
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~------- 105 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEI------- 105 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-------
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEee-------
Confidence 467889999999999999999975 58999999997553322 3578999999999999999999999976
Q ss_pred CceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCc
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 631 (659)
.+..++||||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 106 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg 179 (309)
T 2h34_A 106 DGQLYVDMRLINGVDLAAMLRRQ---GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFG 179 (309)
T ss_dssp TTEEEEEEECCCCEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCC
T ss_pred CCeEEEEEEecCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCc
Confidence 46789999999999999999852 4689999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccc--ccceecccccccCCCCCC
Q 006145 632 LPLLAENAE--KVGHVIPYSGSIDPTNSA 658 (659)
Q Consensus 632 la~~~~~~~--~~~~~~gt~~y~aPE~~~ 658 (659)
++....... ......|++.|+|||+..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 208 (309)
T 2h34_A 180 IASATTDEKLTQLGNTVGTLYYMAPERFS 208 (309)
T ss_dssp C----------------CCGGGCCGGGTC
T ss_pred cCccccccccccccccCCCcCccCHHHHc
Confidence 997664332 234568999999999863
No 217
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.94 E-value=8.7e-28 Score=251.65 Aligned_cols=170 Identities=20% Similarity=0.345 Sum_probs=135.9
Q ss_pred HhhcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC--chHHHHHHHHHHhCCCCCCccceeeeeeeccccCC
Q 006145 474 EATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (659)
Q Consensus 474 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 550 (659)
...++|...+.||+|+||+||+|+.. +|+.||||+++..... ..+.+.+|++++++++||||+++++++.+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------ 104 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHH------ 104 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEE------
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEec------
Confidence 34567899999999999999999955 6999999999755432 23568899999999999999999999986
Q ss_pred CCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeec-----CCcce
Q 006145 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD-----QNLVA 625 (659)
Q Consensus 551 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld-----~~~~~ 625 (659)
.+..++||||++ |+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+|||++ +++.+
T Consensus 105 -~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~ 176 (329)
T 3gbz_A 105 -NHRLHLIFEYAE-NDLKKYMDKN---PDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVL 176 (329)
T ss_dssp -TTEEEEEEECCS-EEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEE
T ss_pred -CCEEEEEEecCC-CCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceE
Confidence 567899999998 5999999863 4589999999999999999999998 999999999999994 45669
Q ss_pred EEccCccccccccc-cccceecccccccCCCCC
Q 006145 626 KISSYNLPLLAENA-EKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 626 kl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~ 657 (659)
||+|||+++..... ......+||+.|+|||+.
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~ 209 (329)
T 3gbz_A 177 KIGDFGLARAFGIPIRQFTHEIITLWYRPPEIL 209 (329)
T ss_dssp EECCTTHHHHHC-----------CCTTCCHHHH
T ss_pred EECcCCCccccCCcccccCCCcCCccccCHHHh
Confidence 99999999766432 334566889999999975
No 218
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.94 E-value=1.5e-27 Score=243.53 Aligned_cols=168 Identities=20% Similarity=0.351 Sum_probs=141.9
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccC---CCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 551 (659)
.++|...+.||+|+||.||+|+.. ++..||||++.... ....+.+.+|++++++++||||+++++++.+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 80 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD------- 80 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEec-------
Confidence 467888899999999999999965 48899999986432 1234679999999999999999999999976
Q ss_pred CceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCc
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 631 (659)
.+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg 154 (279)
T 3fdn_A 81 ATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 154 (279)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCC
T ss_pred CCEEEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEecc
Confidence 46789999999999999999752 4589999999999999999999998 99999999999999999999999999
Q ss_pred cccccccccccceecccccccCCCCC
Q 006145 632 LPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 632 la~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
++...... ......||+.|+|||+.
T Consensus 155 ~~~~~~~~-~~~~~~~~~~y~aPE~~ 179 (279)
T 3fdn_A 155 WSVHAPSS-RRTDLCGTLDYLPPEMI 179 (279)
T ss_dssp EESCC---------CCCCTTCCHHHH
T ss_pred ccccCCcc-cccccCCCCCccCHhHh
Confidence 98655432 23456899999999974
No 219
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=1.4e-27 Score=254.32 Aligned_cols=169 Identities=20% Similarity=0.336 Sum_probs=131.9
Q ss_pred CCCCCceeccCcCceEEEEEecC----CcEEEEEEecccCC-CchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 478 NFDTSAFMGEGSQGQMYRGRLKN----GTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 478 ~~~~~~~ig~G~~g~Vy~~~~~~----g~~vavK~l~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
.|...+.||+|+||.||+|+..+ +..||||.++.... ...++|.+|++++++++||||++++++|... .
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~------~ 163 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS------E 163 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCC------S
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC------C
Confidence 35566899999999999998642 24689999875432 2346799999999999999999999998641 3
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
+..++||||+++|+|.++++.. ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 164 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~ 238 (373)
T 3c1x_A 164 GSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGL 238 (373)
T ss_dssp SCCEEEEECCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--
T ss_pred CCeEEEEECCCCCCHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccc
Confidence 4679999999999999999853 34689999999999999999999998 999999999999999999999999999
Q ss_pred cccccccc-----ccceecccccccCCCCC
Q 006145 633 PLLAENAE-----KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~~-----~~~~~~gt~~y~aPE~~ 657 (659)
++...... ......+|+.|+|||+.
T Consensus 239 a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 268 (373)
T 3c1x_A 239 ARDMYDKEFDSVHNKTGAKLPVKWMALESL 268 (373)
T ss_dssp -------------------CCGGGSCHHHH
T ss_pred cccccccccccccccCCCCCcccccChHHh
Confidence 97653322 12345678899999964
No 220
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.94 E-value=7.1e-28 Score=268.82 Aligned_cols=170 Identities=24% Similarity=0.399 Sum_probs=145.6
Q ss_pred hhcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCce
Q 006145 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (659)
Q Consensus 475 ~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 554 (659)
..++|...+.||+|+||.||+|++..+..||||+++... ...++|.+|+++|++++|+|||+++++|.+ +.
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--------~~ 335 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--------EP 335 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS--------SS
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee--------cc
Confidence 456677889999999999999999888889999997654 345789999999999999999999999863 35
Q ss_pred eEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcccc
Q 006145 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (659)
Q Consensus 555 ~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~ 634 (659)
.++|||||++|+|.++++.. ....+++.++..++.||++||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 336 ~~lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 411 (535)
T 2h8h_A 336 IYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLAR 411 (535)
T ss_dssp CEEEECCCTTEEHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTT
T ss_pred ceEeeehhcCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccce
Confidence 79999999999999999742 124589999999999999999999998 99999999999999999999999999998
Q ss_pred ccccccc--cceecccccccCCCCC
Q 006145 635 LAENAEK--VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 635 ~~~~~~~--~~~~~gt~~y~aPE~~ 657 (659)
....... .....++..|+|||+.
T Consensus 412 ~~~~~~~~~~~~~~~~~~y~aPE~~ 436 (535)
T 2h8h_A 412 LIEDNEYTARQGAKFPIKWTAPEAA 436 (535)
T ss_dssp TCCCHHHHTTCSTTSCGGGSCHHHH
T ss_pred ecCCCceecccCCcCcccccCHHHh
Confidence 7643221 2334577899999964
No 221
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=1.5e-27 Score=251.56 Aligned_cols=170 Identities=23% Similarity=0.370 Sum_probs=139.5
Q ss_pred hhcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCc-----hHHHHHHHHHHhCCCCCCccceeeeeeecccc
Q 006145 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS-----TRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (659)
Q Consensus 475 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-----~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 548 (659)
..++|...+.||+|+||.||+|+.. +|+.||||++....... .+.+.+|++++++++||||+++++++.+
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 83 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH---- 83 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC----
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEee----
Confidence 4567999999999999999999975 59999999997543211 2468899999999999999999999875
Q ss_pred CCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEc
Q 006145 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (659)
Q Consensus 549 ~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~ 628 (659)
.+..++||||+++ +|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 84 ---~~~~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~ 154 (346)
T 1ua2_A 84 ---KSNISLVFDFMET-DLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLA 154 (346)
T ss_dssp ---TTCCEEEEECCSE-EHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred ---CCceEEEEEcCCC-CHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEE
Confidence 4568999999986 899888753 34688999999999999999999998 99999999999999999999999
Q ss_pred cCcccccccc-ccccceecccccccCCCCC
Q 006145 629 SYNLPLLAEN-AEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 629 DFGla~~~~~-~~~~~~~~gt~~y~aPE~~ 657 (659)
|||+++.... .......+||+.|+|||+.
T Consensus 155 Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~ 184 (346)
T 1ua2_A 155 DFGLAKSFGSPNRAYTHQVVTRWYRAPELL 184 (346)
T ss_dssp CCGGGSTTTSCCCCCCCSCCCCTTCCHHHH
T ss_pred ecccceeccCCcccCCcccccccccCchHh
Confidence 9999976643 2334567899999999975
No 222
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.94 E-value=2.3e-27 Score=253.84 Aligned_cols=177 Identities=15% Similarity=0.202 Sum_probs=142.0
Q ss_pred HHhhcCCCCCceeccCcCceEEEEEe-cCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccC--
Q 006145 473 EEATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDD-- 549 (659)
Q Consensus 473 ~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~-- 549 (659)
....++|...+.||+|+||+||+|+. .+|+.||||++..... ...+|+++++.++|||||++++++.......
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 34567899999999999999999996 4699999999865432 2347999999999999999999986532110
Q ss_pred -----------------------------CCCceeEEEEeccCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHhhhh
Q 006145 550 -----------------------------SSVSRIFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFL 599 (659)
Q Consensus 550 -----------------------------~~~~~~~lV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yL 599 (659)
......++||||++ |+|.+.+... .....+++..+..++.|+++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 12345789999998 5888777531 1235699999999999999999999
Q ss_pred cCCCCCCccccCCCCCceeec-CCcceEEccCccccccccccccceecccccccCCCCC
Q 006145 600 HTGIVPGVFSNNLKITDILLD-QNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 600 H~~~~~~iiHrDlk~~NILld-~~~~~kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
|+. +|+||||||+||+++ +++.+||+|||+++............||+.|+|||+.
T Consensus 158 H~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~ 213 (383)
T 3eb0_A 158 HSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELM 213 (383)
T ss_dssp HTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHH
T ss_pred HHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHh
Confidence 998 999999999999998 6899999999999877666666677899999999964
No 223
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.94 E-value=2.2e-27 Score=254.50 Aligned_cols=166 Identities=14% Similarity=0.268 Sum_probs=140.2
Q ss_pred cCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCC--chHHHHHHHHHHhCCC--CCCccceeeeeeeccccCCCC
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLR--HRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~--H~niv~l~g~~~~~~~~~~~~ 552 (659)
.+|...+.||+|+||.||+|+..+++.||||++...... ..+++.+|+++|++++ |||||++++++.. .
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~-------~ 128 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-------D 128 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-------S
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEec-------C
Confidence 458888999999999999999888999999999755432 2367999999999996 5999999999976 4
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
+..|+||| +.+|+|.+++... ..+++..+..++.||++||+|||+. +|+||||||+|||++ ++.+||+|||+
T Consensus 129 ~~~~lv~E-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~ 200 (390)
T 2zmd_A 129 QYIYMVME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGI 200 (390)
T ss_dssp SEEEEEEE-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSS
T ss_pred CEEEEEEe-cCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCc
Confidence 56899999 5688999999863 4689999999999999999999998 999999999999996 58999999999
Q ss_pred cccccccc---ccceecccccccCCCCC
Q 006145 633 PLLAENAE---KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~~---~~~~~~gt~~y~aPE~~ 657 (659)
++...... .....+||+.|||||++
T Consensus 201 a~~~~~~~~~~~~~~~~gt~~y~aPE~~ 228 (390)
T 2zmd_A 201 ANQMQPDTTSVVKDSQVGAVNYMPPEAI 228 (390)
T ss_dssp SCCC---------CCSCCCGGGCCHHHH
T ss_pred cccccCCCccccCCCCCcCCCccChHHh
Confidence 98764332 22456899999999974
No 224
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.94 E-value=1.1e-27 Score=254.11 Aligned_cols=176 Identities=20% Similarity=0.275 Sum_probs=148.1
Q ss_pred cCHHHHHHhhcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCCC-----CCCccceee
Q 006145 467 FSLEELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-----HRHLVSALG 540 (659)
Q Consensus 467 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~-----H~niv~l~g 540 (659)
+++.+.....++|...+.||+|+||+||+|+.. +++.||||+++... ...+.+.+|++++++++ |||||++++
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~ 103 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHG 103 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence 334444455788999999999999999999974 58999999997422 23456888999999986 999999999
Q ss_pred eeeeccccCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeec
Q 006145 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620 (659)
Q Consensus 541 ~~~~~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld 620 (659)
++.. .+..++||||+ +|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++
T Consensus 104 ~~~~-------~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~ 171 (360)
T 3llt_A 104 KFMY-------YDHMCLIFEPL-GPSLYEIITRNN-YNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLD 171 (360)
T ss_dssp EEEE-------TTEEEEEECCC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEES
T ss_pred eeeE-------CCeeEEEEcCC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEc
Confidence 9986 46789999999 999999998532 24589999999999999999999998 999999999999998
Q ss_pred C-------------------------CcceEEccCccccccccccccceecccccccCCCCC
Q 006145 621 Q-------------------------NLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 621 ~-------------------------~~~~kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
+ ++.+||+|||+++.... ......||+.|+|||+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~--~~~~~~gt~~y~aPE~~ 231 (360)
T 3llt_A 172 DPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD--YHGSIINTRQYRAPEVI 231 (360)
T ss_dssp CTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS--CCCSCCSCGGGCCHHHH
T ss_pred cccccccccchhcccccccccccccCCCCEEEEeccCceecCC--CCcCccCcccccCcHHH
Confidence 6 78999999999986543 23456899999999975
No 225
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.94 E-value=3.3e-27 Score=241.51 Aligned_cols=169 Identities=18% Similarity=0.254 Sum_probs=143.0
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC--chHHHHHHHHHHhCC-CCCCccceeeeeeeccccCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~ 551 (659)
.++|...+.||+|+||.||+|+.. +++.||||+++..... ...++.+|+..+.++ +||||+++++++.+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~------- 82 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE------- 82 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEE-------
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeec-------
Confidence 466888899999999999999976 6999999999764322 345789999999999 89999999999976
Q ss_pred CceeEEEEeccCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCC--------
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEGH-AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN-------- 622 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~-------- 622 (659)
.+..++||||+++|+|.+++.... ....+++..+..++.|+++||+|||+. +|+||||||+||+++.+
T Consensus 83 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~ 159 (289)
T 1x8b_A 83 DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASE 159 (289)
T ss_dssp TTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC----------
T ss_pred CCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccc
Confidence 567899999999999999997421 124689999999999999999999998 99999999999999844
Q ss_pred -----------cceEEccCccccccccccccceecccccccCCCCC
Q 006145 623 -----------LVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 623 -----------~~~kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
..+||+|||++....... ...||+.|+|||+.
T Consensus 160 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aPE~~ 202 (289)
T 1x8b_A 160 EGDEDDWASNKVMFKIGDLGHVTRISSPQ---VEEGDSRFLANEVL 202 (289)
T ss_dssp ----------CCCEEECCCTTCEETTCSC---CCCCCGGGCCHHHH
T ss_pred ccccccccCCceEEEEcccccccccCCcc---ccCCCccccChhHh
Confidence 479999999997765432 34699999999975
No 226
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.94 E-value=2.2e-27 Score=244.49 Aligned_cols=170 Identities=17% Similarity=0.287 Sum_probs=148.3
Q ss_pred hhcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC---------chHHHHHHHHHHhCCC-CCCccceeeeee
Q 006145 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---------STRNFMHHIELISKLR-HRHLVSALGHCF 543 (659)
Q Consensus 475 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---------~~~~~~~Ei~~l~~l~-H~niv~l~g~~~ 543 (659)
..++|...+.||+|+||.||+|+.. +|+.||||.++..... ..+.+.+|++++++++ ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3567888999999999999999975 5899999999754311 1246889999999996 999999999997
Q ss_pred eccccCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCc
Q 006145 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL 623 (659)
Q Consensus 544 ~~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~ 623 (659)
. ....++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 95 ~-------~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~ 161 (298)
T 1phk_A 95 T-------NTFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDM 161 (298)
T ss_dssp C-------SSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTC
T ss_pred c-------CCeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCC
Confidence 5 56789999999999999999852 4689999999999999999999998 999999999999999999
Q ss_pred ceEEccCccccccccccccceecccccccCCCCC
Q 006145 624 VAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 624 ~~kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
.+||+|||++.............|++.|+|||+.
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~ 195 (298)
T 1phk_A 162 NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEII 195 (298)
T ss_dssp CEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHH
T ss_pred cEEEecccchhhcCCCcccccccCCccccCHHHh
Confidence 9999999999877665556667899999999964
No 227
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.94 E-value=7.2e-27 Score=239.90 Aligned_cols=171 Identities=23% Similarity=0.286 Sum_probs=142.9
Q ss_pred CCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC--chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCcee
Q 006145 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (659)
Q Consensus 479 ~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~ 555 (659)
|...+.||+|+||.||+|+.. ++..||+|.+...... ..+.+.+|++++++++||||+++++++..... .....
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~---~~~~~ 104 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK---GKKCI 104 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESS---SCEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccC---CCceE
Confidence 556678999999999999965 5889999999755432 23569999999999999999999999875221 24568
Q ss_pred EEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeec-CCcceEEccCcccc
Q 006145 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD-QNLVAKISSYNLPL 634 (659)
Q Consensus 556 ~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld-~~~~~kl~DFGla~ 634 (659)
++||||+++|+|.+++... ..+++..+..++.|+++||+|||+. .++|+||||||+||+++ +++.+||+|||++.
T Consensus 105 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEEEEecCCCCHHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence 9999999999999999752 4689999999999999999999997 12299999999999998 78999999999997
Q ss_pred ccccccccceecccccccCCCCC
Q 006145 635 LAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 635 ~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
..... ......||+.|+|||+.
T Consensus 181 ~~~~~-~~~~~~~t~~y~aPE~~ 202 (290)
T 1t4h_A 181 LKRAS-FAKAVIGTPEFMAPEMY 202 (290)
T ss_dssp GCCTT-SBEESCSSCCCCCGGGG
T ss_pred ccccc-ccccccCCcCcCCHHHH
Confidence 65433 34556799999999975
No 228
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.94 E-value=1.6e-27 Score=248.68 Aligned_cols=168 Identities=17% Similarity=0.260 Sum_probs=141.9
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCC--------CchHHHHHHHHHHhCCCCCCccceeeeeeecc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--------HSTRNFMHHIELISKLRHRHLVSALGHCFECY 546 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--------~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~ 546 (659)
.++|...+.||+|+||.||+|+.. +++.||||.+..... .....+.+|++++++++||||+++++++..
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-- 86 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-- 86 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES--
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC--
Confidence 456888999999999999999965 589999999965421 122458999999999999999999999864
Q ss_pred ccCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcc--
Q 006145 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV-- 624 (659)
Q Consensus 547 ~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~-- 624 (659)
+..++||||+++|+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 87 ------~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~ 154 (322)
T 2ycf_A 87 ------EDYYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDC 154 (322)
T ss_dssp ------SSEEEEEECCTTEETHHHHST---TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSC
T ss_pred ------CceEEEEecCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCC
Confidence 337999999999999999875 24689999999999999999999998 9999999999999987654
Q ss_pred -eEEccCccccccccccccceecccccccCCCCC
Q 006145 625 -AKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 625 -~kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
+||+|||+++............||+.|+|||+.
T Consensus 155 ~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~ 188 (322)
T 2ycf_A 155 LIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 188 (322)
T ss_dssp CEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHH
T ss_pred eEEEccCccceecccccccccccCCcCccCchhh
Confidence 999999999877655445567899999999973
No 229
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.94 E-value=1.2e-27 Score=254.24 Aligned_cols=173 Identities=10% Similarity=0.113 Sum_probs=139.6
Q ss_pred hcCCCCCceeccCcCceEEEEEecC------CcEEEEEEecccCCC-----------chHHHHHHHHHHhCCCCCCccce
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLKN------GTFVAIRCLKMKKCH-----------STRNFMHHIELISKLRHRHLVSA 538 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~-----------~~~~~~~Ei~~l~~l~H~niv~l 538 (659)
.++|...+.||+|+||.||+|++.. ++.||||++...... ....+.+|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4578889999999999999999764 478999998654311 11235566777888999999999
Q ss_pred eeeeeeccccCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCcee
Q 006145 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618 (659)
Q Consensus 539 ~g~~~~~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIL 618 (659)
++++..... .....++||||+ +|+|.+++... ...+++..+..|+.|+++||+|||+. +|+||||||+|||
T Consensus 114 ~~~~~~~~~---~~~~~~lv~e~~-g~~L~~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nil 184 (364)
T 3op5_A 114 WGSGLHDKN---GKSYRFMIMDRF-GSDLQKIYEAN--AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLL 184 (364)
T ss_dssp EEEEEEEET---TEEEEEEEEECE-EEEHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred EeeeeeccC---CcceEEEEEeCC-CCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEE
Confidence 999976321 124579999999 99999999753 34699999999999999999999998 9999999999999
Q ss_pred ec--CCcceEEccCccccccccccc--------cceecccccccCCCCC
Q 006145 619 LD--QNLVAKISSYNLPLLAENAEK--------VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 619 ld--~~~~~kl~DFGla~~~~~~~~--------~~~~~gt~~y~aPE~~ 657 (659)
++ .++.+||+|||+++....... ....+||+.|||||+.
T Consensus 185 l~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 233 (364)
T 3op5_A 185 LNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAH 233 (364)
T ss_dssp EESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHH
T ss_pred EecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHh
Confidence 99 889999999999976643221 1345699999999975
No 230
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=1.8e-26 Score=235.38 Aligned_cols=208 Identities=23% Similarity=0.164 Sum_probs=156.6
Q ss_pred CCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEc
Q 006145 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (659)
Q Consensus 107 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 186 (659)
++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 46888888888888877778888888888888888888777777888888888888888888777788888888888888
Q ss_pred cCCcCCccCCcccCCCCCCcEEeccccccccC-CC-CCCCCCcCCEEEcccCCCCCCCCCCCcccceEecCCCcCCccCc
Q 006145 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGE-VP-DFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIP 264 (659)
Q Consensus 187 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p 264 (659)
++|.+++..+..++.+++|++|++++|.+++. +| .+..+++|++|+|++|.++ +..+
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~---------------------~~~~ 166 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ---------------------SIYC 166 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCC---------------------EECG
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCC---------------------cCCH
Confidence 88888877666788888888888888888763 34 3777777777777666654 3344
Q ss_pred hhccCCcccc----EEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCC
Q 006145 265 AEVSSYYQLQ----RLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLP 336 (659)
Q Consensus 265 ~~~~~l~~L~----~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip 336 (659)
..+..+++|+ .|++++|.+++..+..+ ...+|+.|++++|++++..+..+..+++|+.|++++|++++..|
T Consensus 167 ~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 167 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp GGGHHHHTCTTCCEEEECCSSCCCEECTTSS-CSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred HHhhhhhhccccceeeecCCCcccccCcccc-CCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 4455455555 67778887775444444 33478888888888887666667778888888888888876554
No 231
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.94 E-value=2.1e-27 Score=247.00 Aligned_cols=176 Identities=16% Similarity=0.171 Sum_probs=144.9
Q ss_pred hcCCCCCceeccCcCceEEEEEe-cCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCce
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 554 (659)
.++|...+.||+|+||.||+|+. .+|+.||||++........+.+.+|++++++++||||+++++++.... .....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~~~ 104 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRER---GAKHE 104 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEE---TTEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEecc---CCCce
Confidence 46788899999999999999996 469999999997654444567999999999999999999999997421 12356
Q ss_pred eEEEEeccCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCccc
Q 006145 555 IFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (659)
Q Consensus 555 ~~lV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla 633 (659)
.++||||+++|+|.+++... .....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 89999999999999998742 1235699999999999999999999998 9999999999999999999999999998
Q ss_pred ccccccc----------ccceecccccccCCCCC
Q 006145 634 LLAENAE----------KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 634 ~~~~~~~----------~~~~~~gt~~y~aPE~~ 657 (659)
....... ......||+.|+|||+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 215 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELF 215 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGS
T ss_pred hhcccccccccccccccccccccCCcccCCHhHh
Confidence 6553211 11235679999999976
No 232
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.94 E-value=3.3e-27 Score=243.33 Aligned_cols=170 Identities=19% Similarity=0.324 Sum_probs=140.4
Q ss_pred cCCCCCceeccCcCceEEEEEecC----CcEEEEEEecccCC-CchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCC
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLKN----GTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~~----g~~vavK~l~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 551 (659)
.+|...+.||+|+||.||+|+..+ +..||||.+..... ...+++.+|++++++++||||++++++|...
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 98 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS------ 98 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS------
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcC------
Confidence 456777999999999999998643 33689999875432 2346799999999999999999999998641
Q ss_pred CceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCc
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 631 (659)
.+..++||||+++|+|.++++.. ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 99 ~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg 173 (298)
T 3f66_A 99 EGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFG 173 (298)
T ss_dssp SSCCEEEEECCTTCBHHHHHHCT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCG
T ss_pred CCceEEEEeCCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccc
Confidence 45679999999999999999753 34689999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccc-----ccceecccccccCCCCC
Q 006145 632 LPLLAENAE-----KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 632 la~~~~~~~-----~~~~~~gt~~y~aPE~~ 657 (659)
+++...... ......+|+.|+|||+.
T Consensus 174 ~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 204 (298)
T 3f66_A 174 LARDMYDKEYYSVHNKTGAKLPVKWMALESL 204 (298)
T ss_dssp GGCCCSCGGGCBC-----CCBCGGGSCHHHH
T ss_pred ccccccccchhccccccCCCCCccccChHHh
Confidence 997654322 22445678899999964
No 233
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.94 E-value=1.6e-27 Score=250.86 Aligned_cols=165 Identities=16% Similarity=0.228 Sum_probs=140.3
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCC-CCCCccceeeeeeeccccCCCCc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
.++|...+.||+|+||.||+|+.. +|+.||||+++.... .+.+|++++.++ +||||+++++++.+ .+
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~-------~~ 89 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDD-------GK 89 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEEC-------SS
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEc-------CC
Confidence 456888899999999999999975 589999999975432 345788888888 79999999999975 56
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCC----cceEEcc
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN----LVAKISS 629 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~----~~~kl~D 629 (659)
..|+||||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||++.++ +.+||+|
T Consensus 90 ~~~lv~E~~~gg~L~~~i~~~---~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~D 163 (342)
T 2qr7_A 90 YVYVVTELMKGGELLDKILRQ---KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICD 163 (342)
T ss_dssp EEEEEECCCCSCBHHHHHHTC---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECC
T ss_pred EEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEE
Confidence 789999999999999999753 4689999999999999999999998 99999999999998533 3599999
Q ss_pred Cccccccccc-cccceecccccccCCCCC
Q 006145 630 YNLPLLAENA-EKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 630 FGla~~~~~~-~~~~~~~gt~~y~aPE~~ 657 (659)
||+++..... ......+||+.|+|||+.
T Consensus 164 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~ 192 (342)
T 2qr7_A 164 FGFAKQLRAENGLLMTPCYTANFVAPEVL 192 (342)
T ss_dssp CTTCEECBCTTCCBCCSSCCSSCCCHHHH
T ss_pred CCCcccCcCCCCceeccCCCccccCHHHh
Confidence 9999866433 334567899999999974
No 234
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.94 E-value=3.4e-27 Score=248.13 Aligned_cols=171 Identities=20% Similarity=0.359 Sum_probs=144.7
Q ss_pred HHhhcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhC--CCCCCccceeeeeeeccccCC
Q 006145 473 EEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISK--LRHRHLVSALGHCFECYFDDS 550 (659)
Q Consensus 473 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~--l~H~niv~l~g~~~~~~~~~~ 550 (659)
....++|...+.||+|+||.||+|+. +|+.||||++... ..+++.+|++++.. ++||||+++++++.....
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~--- 110 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNG--- 110 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCS---
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCC---
Confidence 33456799999999999999999998 4899999999643 34678889998887 789999999999876211
Q ss_pred CCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhc--------CCCCCCccccCCCCCceeecCC
Q 006145 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH--------TGIVPGVFSNNLKITDILLDQN 622 (659)
Q Consensus 551 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~iiHrDlk~~NILld~~ 622 (659)
.....++||||+++|+|.+++.+ ..+++..+..++.|+++||+||| +. +|+||||||+||+++++
T Consensus 111 ~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~ 183 (342)
T 1b6c_B 111 TWTQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKN 183 (342)
T ss_dssp SCCCEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTT
T ss_pred ccceeEEEEeecCCCcHHHHHhc----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCC
Confidence 11368999999999999999975 35899999999999999999999 65 99999999999999999
Q ss_pred cceEEccCcccccccccc-----ccceecccccccCCCCC
Q 006145 623 LVAKISSYNLPLLAENAE-----KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 623 ~~~kl~DFGla~~~~~~~-----~~~~~~gt~~y~aPE~~ 657 (659)
+.+||+|||+++...... ......||+.|+|||+.
T Consensus 184 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 223 (342)
T 1b6c_B 184 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 223 (342)
T ss_dssp SCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHH
T ss_pred CCEEEEECCCceeccccccccccccccCCcCcccCCHhhh
Confidence 999999999997665433 22456899999999975
No 235
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.94 E-value=4.4e-27 Score=246.04 Aligned_cols=165 Identities=14% Similarity=0.229 Sum_probs=144.8
Q ss_pred hcCCCCCceeccCcCceEEEEEe-cCCcEEEEEEecccCCCchHHHHHHHHHHhCCC-CCCccceeeeeeeccccCCCCc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~~~~ 553 (659)
.++|+..+.||+|+||.||+|+. .+++.||||+++.. ..+.+.+|++++++++ ||||+++++++.+. ...
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~-----~~~ 106 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDP-----VSR 106 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECT-----TTC
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccC-----CCC
Confidence 35688889999999999999986 46999999998743 3577999999999997 99999999998752 245
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCc-ceEEccCcc
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSYNL 632 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~-~~kl~DFGl 632 (659)
..++||||+++++|.++++. +++..+..++.|+++||+|||+. +|+||||||+|||++.++ .+||+|||+
T Consensus 107 ~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~ 177 (330)
T 3nsz_A 107 TPALVFEHVNNTDFKQLYQT------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGL 177 (330)
T ss_dssp CEEEEEECCCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred ceEEEEeccCchhHHHHHHh------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCC
Confidence 68999999999999999863 88999999999999999999998 999999999999999776 899999999
Q ss_pred ccccccccccceecccccccCCCCC
Q 006145 633 PLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
++............||..|+|||+.
T Consensus 178 a~~~~~~~~~~~~~~~~~y~aPE~~ 202 (330)
T 3nsz_A 178 AEFYHPGQEYNVRVASRYFKGPELL 202 (330)
T ss_dssp CEECCTTCCCCSCCSCGGGCCHHHH
T ss_pred ceEcCCCCccccccccccccChhhh
Confidence 9877666666677899999999974
No 236
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.94 E-value=1.8e-27 Score=249.37 Aligned_cols=180 Identities=14% Similarity=0.206 Sum_probs=133.5
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCCC-CCCccceeeeeeecccc-CCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HRHLVSALGHCFECYFD-DSSV 552 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~-~~~~ 552 (659)
..+|...+.||+|+||.||+|+.. +|+.||||++........+.+.+|++++.++. ||||+++++++...... ....
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 456888899999999999999965 69999999996654444567999999999996 99999999999643221 1224
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
...++||||+. |+|.+++........+++..+..++.|++.||+|||+. .++|+||||||+||+++.++.+||+|||+
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 184 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGS 184 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCEEEccCCcccEEECCCCCEEEecCcc
Confidence 56899999996 79999886422235699999999999999999999997 12299999999999999999999999999
Q ss_pred cccccccccc-------------ceecccccccCCCCC
Q 006145 633 PLLAENAEKV-------------GHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~~~~-------------~~~~gt~~y~aPE~~ 657 (659)
++........ ....||+.|+|||+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~ 222 (337)
T 3ll6_A 185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEII 222 (337)
T ss_dssp CBCCSSCC------------------------------
T ss_pred ceeccccCcccccccccccchhhccccCCCCcCChhhh
Confidence 9766432221 245699999999986
No 237
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.94 E-value=3.1e-27 Score=247.02 Aligned_cols=172 Identities=21% Similarity=0.378 Sum_probs=144.5
Q ss_pred hcCCCCCceeccCcCceEEEEEe-----cCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRL-----KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 550 (659)
.++|...+.||+|+||.||+|++ .+|+.||||++........+++.+|++++++++||||+++++++...
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 114 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA----- 114 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC------
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEec-----
Confidence 34577789999999999999984 35899999999865544557899999999999999999999998752
Q ss_pred CCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccC
Q 006145 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (659)
Q Consensus 551 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 630 (659)
.....++||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+||
T Consensus 115 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Df 189 (326)
T 2w1i_A 115 GRRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDF 189 (326)
T ss_dssp ---CCEEEECCCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCC
T ss_pred CCCceEEEEECCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecC
Confidence 134679999999999999999853 24589999999999999999999998 9999999999999999999999999
Q ss_pred ccccccccccc----cceecccccccCCCCC
Q 006145 631 NLPLLAENAEK----VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~~~~~----~~~~~gt~~y~aPE~~ 657 (659)
|+++....... .....++..|+|||+.
T Consensus 190 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 220 (326)
T 2w1i_A 190 GLTKVLPQDKEYYKVKEPGESPIFWYAPESL 220 (326)
T ss_dssp TTCEECCSSCSEEECSSCCSCCGGGCCHHHH
T ss_pred cchhhccccccccccccCCCCceeEECchhh
Confidence 99987644322 2334677889999974
No 238
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.94 E-value=3.4e-27 Score=267.28 Aligned_cols=161 Identities=20% Similarity=0.285 Sum_probs=134.4
Q ss_pred eeccCcCceEEEEEec---CCcEEEEEEecccCC-CchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCceeEEEE
Q 006145 484 FMGEGSQGQMYRGRLK---NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIF 559 (659)
Q Consensus 484 ~ig~G~~g~Vy~~~~~---~g~~vavK~l~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~~lV~ 559 (659)
.||+|+||.||+|++. ++..||||+++.... ...++|.+|+++|++++|||||+++++|.. +..++||
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~--------~~~~lv~ 414 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA--------EALMLVM 414 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES--------SSEEEEE
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc--------CCeEEEE
Confidence 7999999999999864 467899999976533 345789999999999999999999999864 3489999
Q ss_pred eccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCccccccccc
Q 006145 560 EYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENA 639 (659)
Q Consensus 560 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~ 639 (659)
|||++|+|.+++... ...+++..+..++.||++||+|||+. +||||||||+|||+++++.+||+|||+++.....
T Consensus 415 E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~ 489 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGAD 489 (613)
T ss_dssp ECCTTCBHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--
T ss_pred EeCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCC
Confidence 999999999999753 34699999999999999999999998 9999999999999999999999999999876432
Q ss_pred cc----cceecccccccCCCCC
Q 006145 640 EK----VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 640 ~~----~~~~~gt~~y~aPE~~ 657 (659)
.. .....+++.|||||+.
T Consensus 490 ~~~~~~~~~~~~~~~y~APE~~ 511 (613)
T 2ozo_A 490 DSYYTARSAGKWPLKWYAPECI 511 (613)
T ss_dssp ------------CCTTSCHHHH
T ss_pred CceeeeccCCCCccceeCHhhh
Confidence 21 1233456889999974
No 239
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.94 E-value=1.6e-27 Score=246.04 Aligned_cols=170 Identities=18% Similarity=0.368 Sum_probs=141.5
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCce
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 554 (659)
.++|...+.||+|+||.||+|+.. +|+.||+|.+........+++.+|++++++++||||+++++++.. .+.
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~ 90 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYH-------DGK 90 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------C-C
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeee-------CCe
Confidence 467888899999999999999976 489999999987665567889999999999999999999999976 456
Q ss_pred eEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcccc
Q 006145 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (659)
Q Consensus 555 ~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~ 634 (659)
.++||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 91 ~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 165 (302)
T 2j7t_A 91 LWIMIEFCPGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSA 165 (302)
T ss_dssp EEEEEECCTTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHH
T ss_pred EEEEEEeCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCc
Confidence 89999999999999998742 24589999999999999999999998 99999999999999999999999999985
Q ss_pred cccc-ccccceecccccccCCCCC
Q 006145 635 LAEN-AEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 635 ~~~~-~~~~~~~~gt~~y~aPE~~ 657 (659)
.... ........||+.|+|||+.
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~ 189 (302)
T 2j7t_A 166 KNLKTLQKRDSFIGTPYWMAPEVV 189 (302)
T ss_dssp HHHHHHHC-----CCGGGCCHHHH
T ss_pred cccccccccccccCChhhcCCeee
Confidence 4322 1223456799999999964
No 240
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.94 E-value=1.5e-27 Score=247.82 Aligned_cols=181 Identities=22% Similarity=0.349 Sum_probs=149.4
Q ss_pred CHHHHHHhhcCCCCCceeccCcCceEEEEEe------cCCcEEEEEEecccCCC-chHHHHHHHHHHhCC-CCCCcccee
Q 006145 468 SLEELEEATNNFDTSAFMGEGSQGQMYRGRL------KNGTFVAIRCLKMKKCH-STRNFMHHIELISKL-RHRHLVSAL 539 (659)
Q Consensus 468 ~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~-~~~~~~~Ei~~l~~l-~H~niv~l~ 539 (659)
...++....++|...+.||+|+||.||+|+. .+++.||||+++..... ..+++.+|++++.++ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 4445555678899999999999999999984 24789999999765432 235799999999999 699999999
Q ss_pred eeeeeccccCCCCceeEEEEeccCCCChhhhhcCCCC-------------CCCCCHHHHHHHHHHHHHHhhhhcCCCCCC
Q 006145 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHA-------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPG 606 (659)
Q Consensus 540 g~~~~~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ 606 (659)
++|... ....++||||+++|+|.+++..... ...+++..+..++.|+++||+|||+. +
T Consensus 98 ~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ 168 (316)
T 2xir_A 98 GACTKP------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---K 168 (316)
T ss_dssp EEECCT------TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred EEEecC------CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---C
Confidence 998751 3458999999999999999986321 12389999999999999999999998 9
Q ss_pred ccccCCCCCceeecCCcceEEccCcccccccccc---ccceecccccccCCCCC
Q 006145 607 VFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 607 iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~ 657 (659)
|+||||||+||++++++.+||+|||+++...... ......+|+.|+|||+.
T Consensus 169 i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~ 222 (316)
T 2xir_A 169 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 222 (316)
T ss_dssp CCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHH
T ss_pred cccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhh
Confidence 9999999999999999999999999997654322 22456788999999964
No 241
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.94 E-value=2.7e-27 Score=247.66 Aligned_cols=173 Identities=18% Similarity=0.229 Sum_probs=142.1
Q ss_pred HhhcCCCCC-ceeccCcCceEEEEEec-CCcEEEEEEecccCCC--chHHHHHHHHHHhCCC-CCCccceeeeeeecccc
Q 006145 474 EATNNFDTS-AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLR-HRHLVSALGHCFECYFD 548 (659)
Q Consensus 474 ~~~~~~~~~-~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~ 548 (659)
...+.|... +.||+|+||.||+|+.. +|+.||||+++..... ...++.+|++++.+++ ||||+++++++..
T Consensus 25 ~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~---- 100 (327)
T 3lm5_A 25 NFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN---- 100 (327)
T ss_dssp HHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC----
T ss_pred hhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe----
Confidence 334456665 78999999999999976 5999999999764432 3467999999999995 6999999999975
Q ss_pred CCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecC---Ccce
Q 006145 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ---NLVA 625 (659)
Q Consensus 549 ~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~---~~~~ 625 (659)
.+..++||||+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+
T Consensus 101 ---~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~ 173 (327)
T 3lm5_A 101 ---TSEIILILEYAAGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDI 173 (327)
T ss_dssp ---SSEEEEEEECCTTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCE
T ss_pred ---CCeEEEEEEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcE
Confidence 56789999999999999998652 235699999999999999999999998 9999999999999997 7899
Q ss_pred EEccCccccccccccccceecccccccCCCCC
Q 006145 626 KISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 626 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
||+|||+++............||+.|+|||+.
T Consensus 174 kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~ 205 (327)
T 3lm5_A 174 KIVDFGMSRKIGHACELREIMGTPEYLAPEIL 205 (327)
T ss_dssp EECCGGGCEEC---------CCCGGGCCHHHH
T ss_pred EEeeCccccccCCccccccccCCcCccCCeee
Confidence 99999999887665556677899999999975
No 242
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.94 E-value=2.9e-27 Score=242.87 Aligned_cols=167 Identities=17% Similarity=0.338 Sum_probs=132.9
Q ss_pred hcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCC--chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
.++|...+.||+|+||.||+|+.. ..||||+++..... ..+.|.+|++++++++||||+++++++.. .
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--------~ 92 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA--------P 92 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--------S
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccC--------C
Confidence 567888899999999999999864 35999999765432 23579999999999999999999997643 4
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCccc
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla 633 (659)
..++||||+++|+|.++++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 93 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~ 167 (289)
T 3og7_A 93 QLAIVTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLA 167 (289)
T ss_dssp SCEEEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC--
T ss_pred ccEEEEEecCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceec
Confidence 579999999999999999753 35699999999999999999999998 9999999999999999999999999999
Q ss_pred ccccc---ccccceecccccccCCCCC
Q 006145 634 LLAEN---AEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 634 ~~~~~---~~~~~~~~gt~~y~aPE~~ 657 (659)
+.... ........||+.|+|||+.
T Consensus 168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~ 194 (289)
T 3og7_A 168 TEKSRWSGSHQFEQLSGSILWMAPEVI 194 (289)
T ss_dssp ----------------CCCTTCCHHHH
T ss_pred cccccccccccccccCCCccccCchhh
Confidence 75532 2233456799999999975
No 243
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.94 E-value=7.3e-27 Score=241.41 Aligned_cols=168 Identities=17% Similarity=0.332 Sum_probs=146.8
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCC-CchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
.+.|...+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|++++++++||||+++++++.+ ..
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~ 93 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-------DT 93 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------TT
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-------CC
Confidence 355778899999999999999864 599999999976543 345789999999999999999999999986 45
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCccc
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla 633 (659)
..++||||+++|+|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 94 ~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~ 166 (303)
T 3a7i_A 94 KLWIIMEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA 166 (303)
T ss_dssp EEEEEEECCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred eEEEEEEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccc
Confidence 78999999999999999974 4689999999999999999999998 9999999999999999999999999999
Q ss_pred ccccccc-ccceecccccccCCCCC
Q 006145 634 LLAENAE-KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 634 ~~~~~~~-~~~~~~gt~~y~aPE~~ 657 (659)
....... ......||+.|+|||+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~y~aPE~~ 191 (303)
T 3a7i_A 167 GQLTDTQIKRNTFVGTPFWMAPEVI 191 (303)
T ss_dssp EECBTTBCCBCCCCSCGGGCCHHHH
T ss_pred eecCccccccCccCCCcCccCHHHH
Confidence 7664332 33556899999999975
No 244
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=2.7e-27 Score=251.75 Aligned_cols=171 Identities=15% Similarity=0.233 Sum_probs=138.2
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC--chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ..+++.+|+++++.++||||+++++++...... ...
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~-~~~ 102 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETL-DDF 102 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSST-TTC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcc-ccC
Confidence 467888899999999999999964 6999999999654322 235789999999999999999999998752110 112
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
...|+||||+ +++|.++++. ..+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence 4579999999 8899999975 3589999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccceecccccccCCCCC
Q 006145 633 PLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
++.... .....++|+.|+|||+.
T Consensus 175 a~~~~~--~~~~~~~t~~y~aPE~~ 197 (367)
T 1cm8_A 175 ARQADS--EMTGYVVTRWYRAPEVI 197 (367)
T ss_dssp CEECCS--SCCSSCSCGGGCCTHHH
T ss_pred cccccc--ccCcCcCCCCcCCHHHH
Confidence 987643 24456899999999964
No 245
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.94 E-value=1.2e-27 Score=250.12 Aligned_cols=168 Identities=15% Similarity=0.311 Sum_probs=135.9
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCc-hHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCce
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS-TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 554 (659)
++|...+.||+|+||+||+|+.. +++.||||+++...... ...+.+|++++++++||||+++++++.+ .+.
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~ 74 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT-------EKS 74 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEEC-------SSC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEee-------CCE
Confidence 46788899999999999999976 69999999997544222 2356789999999999999999999975 466
Q ss_pred eEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcccc
Q 006145 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (659)
Q Consensus 555 ~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~ 634 (659)
.++||||++ |+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 75 ~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 148 (324)
T 3mtl_A 75 LTLVFEYLD-KDLKQYLDDC--GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLAR 148 (324)
T ss_dssp EEEEEECCS-EEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEE
T ss_pred EEEEecccc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccc
Confidence 899999997 5999998753 24689999999999999999999998 99999999999999999999999999997
Q ss_pred cccc-ccccceecccccccCCCCC
Q 006145 635 LAEN-AEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 635 ~~~~-~~~~~~~~gt~~y~aPE~~ 657 (659)
.... .......+||+.|+|||+.
T Consensus 149 ~~~~~~~~~~~~~~t~~y~aPE~~ 172 (324)
T 3mtl_A 149 AKSIPTKTYDNEVVTLWYRPPDIL 172 (324)
T ss_dssp CC------------CGGGCCHHHH
T ss_pred cccCCccccccccCcccccChhhh
Confidence 6543 2233556889999999964
No 246
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.94 E-value=4.3e-27 Score=246.02 Aligned_cols=171 Identities=26% Similarity=0.424 Sum_probs=140.8
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcE--EEEEEecccC-CCchHHHHHHHHHHhCC-CCCCccceeeeeeeccccCCC
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTF--VAIRCLKMKK-CHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~--vavK~l~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~ 551 (659)
++|...+.||+|+||.||+|+.. +|.. ||||.++... ....+++.+|+++++++ +||||+++++++.+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~------- 97 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH------- 97 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEE-------
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeee-------
Confidence 56888899999999999999965 4664 4999987533 23346799999999999 89999999999976
Q ss_pred CceeEEEEeccCCCChhhhhcCCC-------------CCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCcee
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEGH-------------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIL 618 (659)
.+..++||||+++|+|.+++.... ....+++..+..++.|+++||+|||+. +|+||||||+||+
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl 174 (327)
T 1fvr_A 98 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNIL 174 (327)
T ss_dssp TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred CCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEE
Confidence 467899999999999999997532 124689999999999999999999998 9999999999999
Q ss_pred ecCCcceEEccCccccccccccccceecccccccCCCCC
Q 006145 619 LDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 619 ld~~~~~kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
++.++.+||+|||+++............+++.|+|||+.
T Consensus 175 ~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~ 213 (327)
T 1fvr_A 175 VGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESL 213 (327)
T ss_dssp ECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHH
T ss_pred EcCCCeEEEcccCcCccccccccccCCCCCccccChhhh
Confidence 999999999999999765444444556678899999964
No 247
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.94 E-value=5.4e-27 Score=248.52 Aligned_cols=183 Identities=17% Similarity=0.184 Sum_probs=137.8
Q ss_pred HHHHHhhcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeecccc
Q 006145 470 EELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (659)
Q Consensus 470 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 548 (659)
++.....++|...+.||+|+||.||+|+.. +|+.||||++.... .....+.+|++.++.++||||+++++++......
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 445567789999999999999999999975 59999999986543 2335677888899999999999999999763322
Q ss_pred CCCCceeEEEEeccCCCChhhhhcC-CCCCCCCCHHHHHHHHHHHHHHhhhhc--CCCCCCccccCCCCCceeecC-Ccc
Q 006145 549 DSSVSRIFLIFEYVPNGTLRSWISE-GHAHQSLTWTQRISAAIGVAKGIQFLH--TGIVPGVFSNNLKITDILLDQ-NLV 624 (659)
Q Consensus 549 ~~~~~~~~lV~Ey~~~GsL~~~l~~-~~~~~~l~~~~~~~i~~~ia~~L~yLH--~~~~~~iiHrDlk~~NILld~-~~~ 624 (659)
.......++||||+++ +|.+.+.. ......+++..+..++.|++.||+||| +. +|+||||||+|||++. ++.
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCc
Confidence 2223347899999987 55444331 112356899999999999999999999 76 9999999999999996 899
Q ss_pred eEEccCccccccccccccceecccccccCCCCC
Q 006145 625 AKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 625 ~kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
+||+|||+++............||+.|+|||+.
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~ 203 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPSEPNVAYICSRYYRAPELI 203 (360)
T ss_dssp EEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHH
T ss_pred EEEeeCCCceecCCCCCcccccCCcceeCHHHH
Confidence 999999999877665556667899999999974
No 248
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.94 E-value=4e-27 Score=246.77 Aligned_cols=169 Identities=24% Similarity=0.365 Sum_probs=140.3
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCc--hHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~--~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
.++|...+.||+|+||.||+|+.. +|+.||||++....... .+.+.+|++++++++||||++++++|.+ .
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~ 96 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKK-------K 96 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------T
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeec-------C
Confidence 456788899999999999999976 49999999986554322 3458899999999999999999999986 5
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
+..++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 97 ~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 170 (331)
T 4aaa_A 97 KRWYLVFEFVDHTILDDLELFP---NGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGF 170 (331)
T ss_dssp TEEEEEEECCSEEHHHHHHHST---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEecCCcchHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCC
Confidence 6789999999999999887642 4599999999999999999999998 999999999999999999999999999
Q ss_pred cccccc-ccccceecccccccCCCCC
Q 006145 633 PLLAEN-AEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~-~~~~~~~~gt~~y~aPE~~ 657 (659)
++.... ........||+.|+|||+.
T Consensus 171 ~~~~~~~~~~~~~~~~t~~y~aPE~~ 196 (331)
T 4aaa_A 171 ARTLAAPGEVYDDEVATRWYRAPELL 196 (331)
T ss_dssp C------------CCCCCTTCCHHHH
T ss_pred ceeecCCccccCCCcCCccccCcccc
Confidence 976543 2334567899999999964
No 249
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.94 E-value=6e-27 Score=244.02 Aligned_cols=167 Identities=22% Similarity=0.392 Sum_probs=141.5
Q ss_pred CCCCceeccCcCceEEEEEec-----CCcEEEEEEecccCC-CchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 479 FDTSAFMGEGSQGQMYRGRLK-----NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 479 ~~~~~~ig~G~~g~Vy~~~~~-----~g~~vavK~l~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
|...+.||+|+||+||++.+. +|+.||||+++.... ...+.+.+|++++++++||||+++++++.+. ..
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~ 107 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA-----GA 107 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TT
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecC-----CC
Confidence 377899999999999998753 588999999976532 2245699999999999999999999999862 23
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
...++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 180 (318)
T 3lxp_A 108 ASLQLVMEYVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGL 180 (318)
T ss_dssp TEEEEEECCCTTCBHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGG
T ss_pred ceEEEEEecccCCcHHHHHhh----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccc
Confidence 568999999999999999985 3489999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccc----cceecccccccCCCCC
Q 006145 633 PLLAENAEK----VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~~~----~~~~~gt~~y~aPE~~ 657 (659)
++....... .....+|..|+|||+.
T Consensus 181 a~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 209 (318)
T 3lxp_A 181 AKAVPEGHEYYRVREDGDSPVFWYAPECL 209 (318)
T ss_dssp CEECCTTCSEEEC---CCCCGGGCCHHHH
T ss_pred cccccccccccccccCCCCCceeeChHHh
Confidence 987654322 2345688889999974
No 250
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.94 E-value=2.5e-27 Score=269.08 Aligned_cols=161 Identities=19% Similarity=0.283 Sum_probs=134.2
Q ss_pred ceeccCcCceEEEEEec---CCcEEEEEEecccCCC--chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCceeEE
Q 006145 483 AFMGEGSQGQMYRGRLK---NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFL 557 (659)
Q Consensus 483 ~~ig~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~~l 557 (659)
+.||+|+||.||+|.+. +++.||||+++..... ..++|.+|+++|++++|||||+++++|.. +..++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--------~~~~l 446 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA--------ESWML 446 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES--------SSEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec--------CCEEE
Confidence 47999999999999753 4678999999765432 24689999999999999999999999863 34799
Q ss_pred EEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCccccccc
Q 006145 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (659)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~ 637 (659)
|||||++|+|.++++. ...+++..+..|+.||+.||+|||+. +||||||||+|||+++++.+||+|||+++...
T Consensus 447 v~E~~~~g~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~ 520 (635)
T 4fl3_A 447 VMEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 520 (635)
T ss_dssp EEECCTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTT
T ss_pred EEEccCCCCHHHHHhh---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccc
Confidence 9999999999999975 24689999999999999999999998 99999999999999999999999999997664
Q ss_pred cccc----cceecccccccCCCCC
Q 006145 638 NAEK----VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 638 ~~~~----~~~~~gt~~y~aPE~~ 657 (659)
.... .....+|+.|+|||++
T Consensus 521 ~~~~~~~~~~~~~~t~~y~APE~~ 544 (635)
T 4fl3_A 521 ADENYYKAQTHGKWPVKWYAPECI 544 (635)
T ss_dssp C-------------CGGGSCHHHH
T ss_pred cCccccccccCCCCceeeeChhhh
Confidence 3321 2344577899999974
No 251
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.94 E-value=2.7e-27 Score=256.32 Aligned_cols=172 Identities=20% Similarity=0.273 Sum_probs=139.4
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCcee
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~ 555 (659)
.+|...+.||+|+||.||+|+.. +|+.||||++.... +.+.+|+++|++++|||||+++++|...... ......
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~-~~~~~~ 128 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEK-KDEVYL 128 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETT-TTEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCC-CcceeE
Confidence 35777899999999999999975 59999999986432 2244799999999999999999998753221 112346
Q ss_pred EEEEeccCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCC-cceEEccCccc
Q 006145 556 FLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN-LVAKISSYNLP 633 (659)
Q Consensus 556 ~lV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~-~~~kl~DFGla 633 (659)
++||||+++ ++.+.+... .....+++..+..++.|+++||+|||+. +|+||||||+|||++.+ +.+||+|||++
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhh
Confidence 799999986 676665421 1235799999999999999999999998 99999999999999965 67899999999
Q ss_pred cccccccccceecccccccCCCCC
Q 006145 634 LLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 634 ~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
+...........+||+.|||||++
T Consensus 205 ~~~~~~~~~~~~~~t~~y~aPE~~ 228 (420)
T 1j1b_A 205 KQLVRGEPNVSYICSRYYRAPELI 228 (420)
T ss_dssp EECCTTCCCCSCCSCTTSCCHHHH
T ss_pred hhcccCCCceeeeeCCCcCCHHHH
Confidence 877555555667899999999975
No 252
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.94 E-value=5.4e-27 Score=240.06 Aligned_cols=167 Identities=20% Similarity=0.332 Sum_probs=145.0
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccC---CCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
++|...+.||+|+||.||+|+.. +++.||||.+.... ....+.+.+|++++++++||||+++++++.+ .
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~ 86 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD-------R 86 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------S
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc-------C
Confidence 56788899999999999999976 58899999996432 2234679999999999999999999999975 4
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
+..++||||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 87 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~ 160 (284)
T 2vgo_A 87 KRIYLMLEFAPRGELYKELQKH---GRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGW 160 (284)
T ss_dssp SEEEEEECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccc
Confidence 6789999999999999999752 3589999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccceecccccccCCCCC
Q 006145 633 PLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
+...... ......|++.|+|||+.
T Consensus 161 ~~~~~~~-~~~~~~~~~~y~aPE~~ 184 (284)
T 2vgo_A 161 SVHAPSL-RRRTMCGTLDYLPPEMI 184 (284)
T ss_dssp CEECSSS-CBCCCCSCGGGCCHHHH
T ss_pred cccCccc-ccccccCCCCcCCHHHh
Confidence 9765432 23456899999999964
No 253
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.94 E-value=4.4e-27 Score=250.53 Aligned_cols=172 Identities=16% Similarity=0.198 Sum_probs=133.8
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC--chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ..+++.+|+++++.++||||+++++++...... ...
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~-~~~ 102 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL-EEF 102 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCST-TTC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccc-ccc
Confidence 467888899999999999999965 5899999999754322 235689999999999999999999998752210 112
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
...++||||+++ +|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 103 QDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp CEEEEEEECCSE-EHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred cceEEEEEcCCC-CHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence 468999999975 88888863 489999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccceecccccccCCCCC
Q 006145 633 PLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
++...........+||+.|+|||+.
T Consensus 174 a~~~~~~~~~~~~~gt~~y~aPE~~ 198 (371)
T 2xrw_A 174 ARTAGTSFMMTPYVVTRYYRAPEVI 198 (371)
T ss_dssp ----------------CTTCCHHHH
T ss_pred ccccccccccCCceecCCccCHHHh
Confidence 9877655555667899999999975
No 254
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.94 E-value=7.8e-27 Score=240.32 Aligned_cols=167 Identities=12% Similarity=0.140 Sum_probs=143.1
Q ss_pred hcCCCCCceeccCcCceEEEEEe-cCCcEEEEEEecccCCCchHHHHHHHHHHhCC-CCCCccceeeeeeeccccCCCCc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ..+++.+|+++++++ +|+||+++++++.+ ..
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~-------~~ 79 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQE-------GL 79 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEE-------TT
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCC-------Cc
Confidence 35688889999999999999995 469999999986443 335688999999999 79999999999875 56
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcc-----eEEc
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV-----AKIS 628 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~-----~kl~ 628 (659)
..++||||+ +|+|.++++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++. +||+
T Consensus 80 ~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~ 153 (298)
T 1csn_A 80 HNVLVIDLL-GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVV 153 (298)
T ss_dssp EEEEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEEC
T ss_pred eeEEEEEec-CCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEE
Confidence 789999999 99999999853 24599999999999999999999998 9999999999999987776 9999
Q ss_pred cCcccccccccc--------ccceecccccccCCCCC
Q 006145 629 SYNLPLLAENAE--------KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 629 DFGla~~~~~~~--------~~~~~~gt~~y~aPE~~ 657 (659)
|||+++...... ......||+.|+|||+.
T Consensus 154 Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 190 (298)
T 1csn_A 154 DFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTH 190 (298)
T ss_dssp CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHH
T ss_pred ECccccccccccccccccccCccCCCCCcccCCchhh
Confidence 999997664432 23456799999999975
No 255
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.94 E-value=8.9e-27 Score=246.14 Aligned_cols=175 Identities=16% Similarity=0.320 Sum_probs=143.1
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC--chHHHHHHHHHHhCCCCCCccceeeeeeecccc-CCCC
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFD-DSSV 552 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~-~~~~ 552 (659)
++|...+.||+|+||.||+|+.. +|+.||||++...... ....+.+|++++++++||||+++++++...... ....
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 56888899999999999999974 6999999998654322 245789999999999999999999999763210 0113
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
+..++||||+++ +|.+.+... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred ceEEEEEeccCC-CHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchh
Confidence 468999999985 888877653 24699999999999999999999998 999999999999999999999999999
Q ss_pred cccccc-----ccccceecccccccCCCCC
Q 006145 633 PLLAEN-----AEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~-----~~~~~~~~gt~~y~aPE~~ 657 (659)
++.... ........||+.|+|||+.
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 200 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELL 200 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHH
T ss_pred cccccccccccccccCCcccccCccCchhh
Confidence 976542 2223556889999999964
No 256
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.94 E-value=2e-27 Score=252.01 Aligned_cols=169 Identities=14% Similarity=0.274 Sum_probs=143.3
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC-chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
.++|...+.||+|+||.||+|+.. +|+.||+|++...... ..+.+.+|++++++++||||+++++++.+ .+
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~ 104 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-------DG 104 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE-------TT
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE-------CC
Confidence 356788899999999999999976 5999999999765322 23579999999999999999999999986 46
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCccc
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla 633 (659)
..++||||+++|+|.++++.. ..+++..+..++.+++.||+|||+.+ +|+||||||+||+++.++.+||+|||++
T Consensus 105 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 179 (360)
T 3eqc_A 105 EISICMEHMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVS 179 (360)
T ss_dssp EEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCC
T ss_pred EEEEEEECCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCC
Confidence 789999999999999999852 35899999999999999999999831 7999999999999999999999999999
Q ss_pred cccccccccceecccccccCCCCC
Q 006145 634 LLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 634 ~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
+..... ......||+.|+|||+.
T Consensus 180 ~~~~~~-~~~~~~gt~~y~aPE~~ 202 (360)
T 3eqc_A 180 GQLIDS-MANSFVGTRSYMSPERL 202 (360)
T ss_dssp HHHHHH-C----CCCCTTCCHHHH
T ss_pred cccccc-cccCCCCCCCeECHHHH
Confidence 755332 23456899999999975
No 257
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=7e-27 Score=245.19 Aligned_cols=169 Identities=22% Similarity=0.382 Sum_probs=135.7
Q ss_pred cCCCCCceeccCcCceEEEEEecC-----CcEEEEEEecccCCC-chHHHHHHHHHHhCCCCCCccceeeeeeeccccCC
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLKN-----GTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~~-----g~~vavK~l~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 550 (659)
++|...+.||+|+||.||+|+... +..||||.++..... ...+|.+|++++++++||||+++++++..
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------ 117 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK------ 117 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS------
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec------
Confidence 455667899999999999998653 346999999754332 23569999999999999999999999875
Q ss_pred CCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccC
Q 006145 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (659)
Q Consensus 551 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 630 (659)
.+..++||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+||
T Consensus 118 -~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Df 191 (333)
T 1mqb_A 118 -YKPMMIITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDF 191 (333)
T ss_dssp -SSSEEEEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC
T ss_pred -CCCcEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCC
Confidence 45689999999999999999753 24699999999999999999999998 9999999999999999999999999
Q ss_pred ccccccccccc----cceecccccccCCCCC
Q 006145 631 NLPLLAENAEK----VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~~~~~----~~~~~gt~~y~aPE~~ 657 (659)
|+++....... .....+|+.|+|||+.
T Consensus 192 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 222 (333)
T 1mqb_A 192 GLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222 (333)
T ss_dssp CC-----------------CCCGGGSCHHHH
T ss_pred CcchhhccccccccccCCCCccccccCchhc
Confidence 99976643221 2234567899999964
No 258
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=9.4e-27 Score=238.71 Aligned_cols=168 Identities=19% Similarity=0.278 Sum_probs=140.5
Q ss_pred cCCCCCc-eeccCcCceEEEEEec---CCcEEEEEEecccCC-CchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCC
Q 006145 477 NNFDTSA-FMGEGSQGQMYRGRLK---NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 477 ~~~~~~~-~ig~G~~g~Vy~~~~~---~g~~vavK~l~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 551 (659)
++|...+ .||+|+||.||+|+.. ++..||||+++.... ...+++.+|++++++++||||+++++++..
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------- 81 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------- 81 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-------
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecC-------
Confidence 3444445 8999999999999854 578899999976532 234679999999999999999999999843
Q ss_pred CceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCc
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 631 (659)
+..++||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 82 -~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg 155 (287)
T 1u59_A 82 -EALMLVMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFG 155 (287)
T ss_dssp -SSEEEEEECCTTEEHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCT
T ss_pred -CCcEEEEEeCCCCCHHHHHHhC--CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECccc
Confidence 4589999999999999999742 34699999999999999999999998 99999999999999999999999999
Q ss_pred cccccccccc----cceecccccccCCCCC
Q 006145 632 LPLLAENAEK----VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 632 la~~~~~~~~----~~~~~gt~~y~aPE~~ 657 (659)
+++....... .....+|+.|+|||+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 185 (287)
T 1u59_A 156 LSKALGADDSYYTARSAGKWPLKWYAPECI 185 (287)
T ss_dssp TCEECTTCSCEECCCCSSCCCGGGCCHHHH
T ss_pred ceeeeccCcceeeccccccccccccCHHHh
Confidence 9976643222 1334568899999964
No 259
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.94 E-value=3.5e-27 Score=253.28 Aligned_cols=173 Identities=17% Similarity=0.215 Sum_probs=139.7
Q ss_pred cCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCceeE
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~~ 556 (659)
.+|...+.||+|+||+||+|+...+..||+|++..... ...+|+++++.++|||||++++++..... .......+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~-~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGD-KKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESS-SSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCC-CCCceEEE
Confidence 45778899999999999999987777799998864332 22379999999999999999999975321 11233478
Q ss_pred EEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeec-CCcceEEccCccccc
Q 006145 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD-QNLVAKISSYNLPLL 635 (659)
Q Consensus 557 lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld-~~~~~kl~DFGla~~ 635 (659)
+||||++++.+....+.......+++..+..++.|+++||+|||+. +|+||||||+|||++ +++.+||+|||+++.
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 9999998754443332111235699999999999999999999998 999999999999999 789999999999987
Q ss_pred cccccccceecccccccCCCCC
Q 006145 636 AENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 636 ~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
..........+||+.|+|||++
T Consensus 192 ~~~~~~~~~~~~t~~y~aPE~~ 213 (394)
T 4e7w_A 192 LIAGEPNVSYICSRYYRAPELI 213 (394)
T ss_dssp CCTTCCCCSSCSCGGGCCHHHH
T ss_pred ccCCCCCcccccCcCccCHHHH
Confidence 7665556677899999999964
No 260
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.94 E-value=4e-27 Score=241.98 Aligned_cols=169 Identities=18% Similarity=0.270 Sum_probs=138.6
Q ss_pred hhcCCCCCc-eeccCcCceEEEEEec---CCcEEEEEEecccCCCc--hHHHHHHHHHHhCCCCCCccceeeeeeecccc
Q 006145 475 ATNNFDTSA-FMGEGSQGQMYRGRLK---NGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (659)
Q Consensus 475 ~~~~~~~~~-~ig~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~--~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 548 (659)
..++|...+ .||+|+||.||+|.+. +++.||||+++...... .+++.+|+++++.++||||+++++++.
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----- 88 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE----- 88 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC-----
Confidence 345676777 9999999999999643 37899999997654322 467999999999999999999999984
Q ss_pred CCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEc
Q 006145 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (659)
Q Consensus 549 ~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~ 628 (659)
.+..++||||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 89 ---~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~ 159 (291)
T 1xbb_A 89 ---AESWMLVMEMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKIS 159 (291)
T ss_dssp ---SSSEEEEEECCTTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEEC
T ss_pred ---CCCcEEEEEeCCCCCHHHHHHhC---cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEc
Confidence 34589999999999999999862 4589999999999999999999998 99999999999999999999999
Q ss_pred cCccccccccccc----cceecccccccCCCCC
Q 006145 629 SYNLPLLAENAEK----VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 629 DFGla~~~~~~~~----~~~~~gt~~y~aPE~~ 657 (659)
|||+++....... .....+++.|+|||+.
T Consensus 160 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 192 (291)
T 1xbb_A 160 DFGLSKALRADENYYKAQTHGKWPVKWYAPECI 192 (291)
T ss_dssp CCTTCEECCTTCSEEEC----CCCGGGCCHHHH
T ss_pred cCCcceeeccCCCcccccccCCCCceeeChHHh
Confidence 9999976643322 1234567889999964
No 261
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.94 E-value=7.2e-27 Score=248.22 Aligned_cols=172 Identities=15% Similarity=0.286 Sum_probs=144.9
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC-chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
.++|...+.||+|+||.||+|+.. +++.||||++...... ..+++.+|++++++++||||+++++++.....+ ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~~~ 103 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIE--QMK 103 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTT--TCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCcc--ccc
Confidence 457888999999999999999965 5889999999754322 236799999999999999999999999753221 134
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCccc
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla 633 (659)
..++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 104 ~~~iv~e~~~-~~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 104 DVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp CEEEEEECCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEcccC-cCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcce
Confidence 6899999997 599999875 3589999999999999999999998 9999999999999999999999999999
Q ss_pred cccccccc----cceecccccccCCCCC
Q 006145 634 LLAENAEK----VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 634 ~~~~~~~~----~~~~~gt~~y~aPE~~ 657 (659)
+....... ....+||+.|+|||+.
T Consensus 176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 203 (364)
T 3qyz_A 176 RVADPDHDHTGFLTEYVATRWYRAPEIM 203 (364)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCHHHH
T ss_pred EecCCCCCccccccccccccCCCCCHHh
Confidence 76643322 2456899999999963
No 262
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.94 E-value=4e-27 Score=240.64 Aligned_cols=169 Identities=20% Similarity=0.356 Sum_probs=140.0
Q ss_pred hcCCCCCceeccCcCceEEEEEecC----CcEEEEEEecccCC-CchHHHHHHHHHHhCCCCCCccceeeeeeeccccCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLKN----GTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~~----g~~vavK~l~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 550 (659)
.++|...+.||+|+||.||+|+... +..||||.+..... ...++|.+|++++++++||||+++++++.+
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------ 84 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE------ 84 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS------
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC------
Confidence 4668888999999999999998643 34699999976532 234679999999999999999999998863
Q ss_pred CCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccC
Q 006145 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (659)
Q Consensus 551 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 630 (659)
+..++||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 85 --~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 157 (281)
T 3cc6_A 85 --EPTWIIMELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDF 157 (281)
T ss_dssp --SSCEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCC
T ss_pred --CCCEEEEecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCcc
Confidence 3468999999999999999752 24589999999999999999999998 9999999999999999999999999
Q ss_pred cccccccccc--ccceecccccccCCCCC
Q 006145 631 NLPLLAENAE--KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~~~~--~~~~~~gt~~y~aPE~~ 657 (659)
|+++...... ......+++.|+|||+.
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 186 (281)
T 3cc6_A 158 GLSRYIEDEDYYKASVTRLPIKWMSPESI 186 (281)
T ss_dssp CGGGCC---------CCCCCGGGCCHHHH
T ss_pred CCCcccccccccccccCCCCcceeCchhh
Confidence 9997664432 22445678899999964
No 263
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.94 E-value=6.9e-27 Score=240.98 Aligned_cols=176 Identities=19% Similarity=0.337 Sum_probs=140.3
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccc------c
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYF------D 548 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~------~ 548 (659)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ...+++.+|++++++++||||++++++|.+... .
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 456888899999999999999965 69999999996432 234679999999999999999999999865210 0
Q ss_pred CCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEc
Q 006145 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (659)
Q Consensus 549 ~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~ 628 (659)
.......++||||+++|+|.++++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~ 158 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSE--NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIG 158 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHS--CGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEEC
T ss_pred cccCCceEEEEecCCCCCHHHhhhcc--ccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEe
Confidence 01245689999999999999999852 24578899999999999999999998 99999999999999999999999
Q ss_pred cCccccccccc---------------cccceecccccccCCCCC
Q 006145 629 SYNLPLLAENA---------------EKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 629 DFGla~~~~~~---------------~~~~~~~gt~~y~aPE~~ 657 (659)
|||+++..... .......||+.|+|||+.
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 202 (303)
T 1zy4_A 159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVL 202 (303)
T ss_dssp CCCCCSCTTC-------------------------CTTSCHHHH
T ss_pred eCcchhhcccccchhccccccccccccccccCCCcccccCcccc
Confidence 99999765421 123456799999999974
No 264
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.94 E-value=2.4e-27 Score=248.47 Aligned_cols=174 Identities=22% Similarity=0.357 Sum_probs=144.5
Q ss_pred HhhcCCCCCceeccCcCceEEEEEecC-C-----cEEEEEEecccCCC-chHHHHHHHHHHhCC-CCCCccceeeeeeec
Q 006145 474 EATNNFDTSAFMGEGSQGQMYRGRLKN-G-----TFVAIRCLKMKKCH-STRNFMHHIELISKL-RHRHLVSALGHCFEC 545 (659)
Q Consensus 474 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~-g-----~~vavK~l~~~~~~-~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~ 545 (659)
...++|...+.||+|+||.||+|+... + ..||||.+...... ..+.+.+|+++++++ +||||++++++|..
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 121 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH- 121 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec-
Confidence 345778889999999999999999642 3 48999999755432 345799999999999 89999999999975
Q ss_pred cccCCCCceeEEEEeccCCCChhhhhcCCC-----------CCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCC
Q 006145 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGH-----------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKI 614 (659)
Q Consensus 546 ~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~ 614 (659)
.+..++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||
T Consensus 122 ------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp 192 (333)
T 2i1m_A 122 ------GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAA 192 (333)
T ss_dssp ------SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSG
T ss_pred ------CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCccc
Confidence 456899999999999999987421 124589999999999999999999998 999999999
Q ss_pred CceeecCCcceEEccCccccccccccc---cceecccccccCCCCC
Q 006145 615 TDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 615 ~NILld~~~~~kl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~ 657 (659)
+||++++++.+||+|||+++....... .....+|+.|+|||+.
T Consensus 193 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 238 (333)
T 2i1m_A 193 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI 238 (333)
T ss_dssp GGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHH
T ss_pred ceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHh
Confidence 999999999999999999976543322 2345678899999964
No 265
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.94 E-value=2.8e-27 Score=241.35 Aligned_cols=174 Identities=17% Similarity=0.326 Sum_probs=144.1
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC--chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
.++|...+.||+|+||.||+|+.. +|+.||+|.+...... ..+.+.+|++++++++||||+++++++.+.. .
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~ 79 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRT-----N 79 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGG-----G
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCC-----C
Confidence 356788899999999999999975 5999999999765432 2356999999999999999999999886521 3
Q ss_pred ceeEEEEeccCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHhhhhcCCCCCC-----ccccCCCCCceeecCCcceE
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGH-AHQSLTWTQRISAAIGVAKGIQFLHTGIVPG-----VFSNNLKITDILLDQNLVAK 626 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~-----iiHrDlk~~NILld~~~~~k 626 (659)
...++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+. + |+||||||+||++++++.+|
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~k 156 (279)
T 2w5a_A 80 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVK 156 (279)
T ss_dssp TEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEE
T ss_pred ceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEE
Confidence 56899999999999999997421 234599999999999999999999997 6 99999999999999999999
Q ss_pred EccCccccccccccc-cceecccccccCCCCC
Q 006145 627 ISSYNLPLLAENAEK-VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 627 l~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~ 657 (659)
|+|||+++....... .....||+.|+|||+.
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~ 188 (279)
T 2w5a_A 157 LGDFGLARILNHDTSFAKTFVGTPYYMSPEQM 188 (279)
T ss_dssp ECCCCHHHHC---CHHHHHHHSCCTTCCHHHH
T ss_pred EecCchheeeccccccccccCCCccccChHHh
Confidence 999999976643322 3456799999999964
No 266
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.94 E-value=8.6e-28 Score=256.61 Aligned_cols=175 Identities=13% Similarity=0.186 Sum_probs=136.0
Q ss_pred hcCCCCCceeccCcCceEEEEEe-cCCcEEEEEEecccC---CCchHHHHHHH---HHHhCCCCCCcccee-------ee
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKK---CHSTRNFMHHI---ELISKLRHRHLVSAL-------GH 541 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~Ei---~~l~~l~H~niv~l~-------g~ 541 (659)
.++|...+.||+|+||+||+|+. .+|+.||||++.... ....+.|.+|+ +++++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46688889999999999999996 469999999997442 22346799999 566666899999999 44
Q ss_pred eeeccc-------cCCCC---ceeEEEEeccCCCChhhhhcCCC----CCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCc
Q 006145 542 CFECYF-------DDSSV---SRIFLIFEYVPNGTLRSWISEGH----AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGV 607 (659)
Q Consensus 542 ~~~~~~-------~~~~~---~~~~lV~Ey~~~GsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i 607 (659)
+.+... .+... ...|+||||+ +|+|.+++.... ....++|..+..|+.|+++||+|||+. +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 432100 00000 0378999999 689999997421 112355788899999999999999998 99
Q ss_pred cccCCCCCceeecCCcceEEccCccccccccccccceecccccccCCCCC
Q 006145 608 FSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 608 iHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
+||||||+|||++.++.+||+|||+++.... .....+| +.|+|||+.
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~--~~~~~~g-~~y~aPE~~ 274 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA--RVVSSVS-RGFEPPELE 274 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC--EEECCCC-TTCCCHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC--cccCCCC-cCccChhhh
Confidence 9999999999999999999999999986433 3455677 999999975
No 267
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.94 E-value=9.9e-27 Score=239.78 Aligned_cols=169 Identities=20% Similarity=0.366 Sum_probs=142.2
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCC--CchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCc
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
++|...+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||+++++++.. .+
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~ 75 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-------EN 75 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEE-------TT
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEec-------CC
Confidence 56788899999999999999976 699999999975432 224678999999999999999999999986 46
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCccc
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla 633 (659)
..++||||++ |+|.+++.... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 76 ~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~ 150 (299)
T 2r3i_A 76 KLYLVFEFLH-QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 150 (299)
T ss_dssp EEEEEEECCS-EEHHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHH
T ss_pred ceEEEEEccc-CCHHHHHHhhh-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhh
Confidence 7899999998 69999987532 24689999999999999999999998 9999999999999999999999999999
Q ss_pred cccccc-cccceecccccccCCCCC
Q 006145 634 LLAENA-EKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 634 ~~~~~~-~~~~~~~gt~~y~aPE~~ 657 (659)
+..... .......+|+.|+|||+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~aPE~~ 175 (299)
T 2r3i_A 151 RAFGVPVRTYTHEVVTLWYRAPEIL 175 (299)
T ss_dssp HHHCCCSBCTTSCBCCCTTCCHHHH
T ss_pred hhccCCccccCcccccccccCcHHh
Confidence 765432 233456789999999964
No 268
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.94 E-value=1.8e-26 Score=238.48 Aligned_cols=172 Identities=18% Similarity=0.303 Sum_probs=142.9
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccC----CCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK----CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 550 (659)
.++|...+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 78 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNE----- 78 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC-----
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcC-----
Confidence 467999999999999999999965 58999999997542 23346799999999999999999999998641
Q ss_pred CCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccC
Q 006145 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (659)
Q Consensus 551 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 630 (659)
.....++||||+++| |.+++... ....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 79 ~~~~~~lv~e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~df 153 (305)
T 2wtk_C 79 EKQKMYMVMEYCVCG-MQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISAL 153 (305)
T ss_dssp ---CEEEEEECCSEE-HHHHHHHS-TTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred CCCeEEEEehhccCC-HHHHHHhC-cccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecc
Confidence 145689999999886 77777642 235699999999999999999999998 9999999999999999999999999
Q ss_pred cccccccc---ccccceecccccccCCCCC
Q 006145 631 NLPLLAEN---AEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~~---~~~~~~~~gt~~y~aPE~~ 657 (659)
|++..... ........||+.|+|||+.
T Consensus 154 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 183 (305)
T 2wtk_C 154 GVAEALHPFAADDTCRTSQGSPAFQPPEIA 183 (305)
T ss_dssp TTCEECCTTCSSCEECCCCSCGGGCCHHHH
T ss_pred ccccccCccccccccccCCCCCCCcChhhc
Confidence 99976542 2223456799999999974
No 269
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=5.2e-27 Score=244.43 Aligned_cols=235 Identities=20% Similarity=0.170 Sum_probs=202.7
Q ss_pred CCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccC
Q 006145 109 LKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRN 188 (659)
Q Consensus 109 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 188 (659)
++.++++.+.+...++..+..+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..| +..+++|++|+|++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 4556667777766666677788999999999999998888899999999999999999987655 99999999999999
Q ss_pred CcCCccCCcccCCCCCCcEEeccccccccCCCCCCCCCcCCEEEcccCCCCCCCCCC---CcccceEecCCCcCCccCch
Q 006145 189 NMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKV---GKKLVTMILSKNKFRSAIPA 265 (659)
Q Consensus 189 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~ 265 (659)
|.+++.. .+++|++|++++|++++..+. .+++|++|++++|.+++..+.. +++|+.|++++|.+++..|.
T Consensus 90 n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~--~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 162 (317)
T 3o53_A 90 NYVQELL-----VGPSIETLHAANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFA 162 (317)
T ss_dssp SEEEEEE-----ECTTCCEEECCSSCCSEEEEC--CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGG
T ss_pred Ccccccc-----CCCCcCEEECCCCccCCcCcc--ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHH
Confidence 9998533 348999999999999987654 3688999999999999876654 47899999999999998887
Q ss_pred hc-cCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCC
Q 006145 266 EV-SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSK 344 (659)
Q Consensus 266 ~~-~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~ 344 (659)
.+ ..+++|+.|+|++|.+++. |. ...+++|+.|++++|++++.. ..+..+++|+.|++++|+++ .+|..+..+++
T Consensus 163 ~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~-~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~ 238 (317)
T 3o53_A 163 ELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMG-PEFQSAAGVTWISLRNNKLV-LIEKALRFSQN 238 (317)
T ss_dssp GGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEEC-GGGGGGTTCSEEECTTSCCC-EECTTCCCCTT
T ss_pred HHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcch-hhhcccCcccEEECcCCccc-chhhHhhcCCC
Confidence 77 4789999999999999865 43 345899999999999999654 45888999999999999999 58888989999
Q ss_pred CCEEEcCCcccc
Q 006145 345 NRVVLYARNCLA 356 (659)
Q Consensus 345 l~~l~~~~N~l~ 356 (659)
++.+++++|.+.
T Consensus 239 L~~L~l~~N~~~ 250 (317)
T 3o53_A 239 LEHFDLRGNGFH 250 (317)
T ss_dssp CCEEECTTCCCB
T ss_pred CCEEEccCCCcc
Confidence 999999999886
No 270
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.93 E-value=1.3e-26 Score=240.69 Aligned_cols=180 Identities=15% Similarity=0.306 Sum_probs=135.7
Q ss_pred HHhhcCCCCCceeccCcCceEEEEEec----CCcEEEEEEecccCCC--chHHHHHHHHHHhCCCCCCccceeeeeeecc
Q 006145 473 EEATNNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECY 546 (659)
Q Consensus 473 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~ 546 (659)
....++|...+.||+|+||.||+|+.. ++..||||+++..... ..+++.+|++++++++||||+++++++.+..
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109 (313)
T ss_dssp BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence 344567888899999999999999864 3558999999755432 2356999999999999999999999997632
Q ss_pred ccCCCCceeEEEEeccCCCChhhhhcCC---CCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCc
Q 006145 547 FDDSSVSRIFLIFEYVPNGTLRSWISEG---HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL 623 (659)
Q Consensus 547 ~~~~~~~~~~lV~Ey~~~GsL~~~l~~~---~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~ 623 (659)
.. .....++||||+++|+|.+++... .....+++..+..++.|+++||+|||+. +|+||||||+||++++++
T Consensus 110 ~~--~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~ 184 (313)
T 3brb_A 110 SQ--GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDM 184 (313)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTS
T ss_pred cc--CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCC
Confidence 11 112469999999999999998521 2235699999999999999999999998 999999999999999999
Q ss_pred ceEEccCcccccccccc---ccceecccccccCCCCC
Q 006145 624 VAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 624 ~~kl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~ 657 (659)
.+||+|||+++...... ......+++.|+|||+.
T Consensus 185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 221 (313)
T 3brb_A 185 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL 221 (313)
T ss_dssp CEEECSCSCC----------------CCGGGSCHHHH
T ss_pred cEEEeecCcceecccccccCcccccCCCccccCchhh
Confidence 99999999997664332 12345678899999974
No 271
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.93 E-value=9e-27 Score=243.71 Aligned_cols=169 Identities=20% Similarity=0.353 Sum_probs=135.1
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcE----EEEEEecccC-CCchHHHHHHHHHHhCCCCCCccceeeeeeeccccC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTF----VAIRCLKMKK-CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDD 549 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~----vavK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 549 (659)
.++|...+.||+|+||.||+|+.. +++. ||+|.+.... ....+++.+|++++++++||||++++++|..
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----- 88 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT----- 88 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES-----
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec-----
Confidence 356888899999999999999964 4543 5777775433 3345789999999999999999999999975
Q ss_pred CCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEcc
Q 006145 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISS 629 (659)
Q Consensus 550 ~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~D 629 (659)
...++|+||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 89 ---~~~~~v~~~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~D 160 (327)
T 3lzb_A 89 ---STVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITD 160 (327)
T ss_dssp ---SSEEEEECCCSSCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECC
T ss_pred ---CCceEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEcc
Confidence 3478999999999999999753 24689999999999999999999998 999999999999999999999999
Q ss_pred Cccccccccccc---cceecccccccCCCCC
Q 006145 630 YNLPLLAENAEK---VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 630 FGla~~~~~~~~---~~~~~gt~~y~aPE~~ 657 (659)
||+++....... .....+|+.|+|||+.
T Consensus 161 fG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~ 191 (327)
T 3lzb_A 161 FGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191 (327)
T ss_dssp TTC----------------CCCGGGSCHHHH
T ss_pred CcceeEccCccccccccCCCccccccCHHHH
Confidence 999976643322 2345578899999964
No 272
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.93 E-value=3e-27 Score=264.58 Aligned_cols=159 Identities=11% Similarity=0.125 Sum_probs=124.1
Q ss_pred eeccCcCceEEEEE-ecCCcEEEEEEecccCCC----------chHHHHHHHHHHhCC-CCCCccceeeeeeeccccCCC
Q 006145 484 FMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCH----------STRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 484 ~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~----------~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~ 551 (659)
..+.|+.|.+..++ ...|+.+|||.+...... ..++|.+|+++|+++ .|+||+++++++.+
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed------- 313 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGEN------- 313 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEEC-------
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEE-------
Confidence 34566666666655 335899999999754311 125699999999999 69999999999976
Q ss_pred CceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCc
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 631 (659)
....||||||++||+|.+++.+. ..++.. +|+.||+.||+|+|+. +||||||||+|||+++++.+||+|||
T Consensus 314 ~~~~yLVMEyv~G~~L~d~i~~~---~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFG 384 (569)
T 4azs_A 314 AQSGWLVMEKLPGRLLSDMLAAG---EEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFG 384 (569)
T ss_dssp SSEEEEEEECCCSEEHHHHHHTT---CCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEecCCCCcHHHHHHhC---CCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecc
Confidence 56799999999999999999863 346653 5899999999999999 99999999999999999999999999
Q ss_pred cccccccc-cccceecccccccCCCCCC
Q 006145 632 LPLLAENA-EKVGHVIPYSGSIDPTNSA 658 (659)
Q Consensus 632 la~~~~~~-~~~~~~~gt~~y~aPE~~~ 658 (659)
+|+..... ......+||+.|||||++.
T Consensus 385 lAr~~~~~~~~~~t~vGTp~YmAPE~l~ 412 (569)
T 4azs_A 385 SIVTTPQDCSWPTNLVQSFFVFVNELFA 412 (569)
T ss_dssp TEESCC---CCSHHHHHHHHHHHHHHC-
T ss_pred cCeeCCCCCccccCceechhhccHHHhC
Confidence 99866433 3446689999999999863
No 273
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.93 E-value=1.5e-26 Score=240.27 Aligned_cols=169 Identities=22% Similarity=0.378 Sum_probs=141.6
Q ss_pred hhcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCc
Q 006145 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 475 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
..++|...+.||+|+||.||+|+.. +|+.||||.+.... ..+++.+|++++++++||||+++++++.. .+
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~ 97 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFK-------NT 97 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEE-------TT
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEe-------CC
Confidence 3567888899999999999999976 49999999997543 35779999999999999999999999986 45
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCccc
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla 633 (659)
..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 98 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 172 (314)
T 3com_A 98 DLWIVMEYCGAGSVSDIIRLR--NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVA 172 (314)
T ss_dssp EEEEEEECCTTEEHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccc
Confidence 789999999999999998732 24689999999999999999999998 9999999999999999999999999999
Q ss_pred cccccc-cccceecccccccCCCCC
Q 006145 634 LLAENA-EKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 634 ~~~~~~-~~~~~~~gt~~y~aPE~~ 657 (659)
...... .......||+.|+|||+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~y~aPE~~ 197 (314)
T 3com_A 173 GQLTDTMAKRNTVIGTPFWMAPEVI 197 (314)
T ss_dssp EECBTTBSCBCCCCSCGGGCCHHHH
T ss_pred hhhhhhccccCccCCCCCccChhhc
Confidence 765433 233456899999999974
No 274
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.93 E-value=4.2e-27 Score=242.87 Aligned_cols=174 Identities=17% Similarity=0.319 Sum_probs=128.3
Q ss_pred HhhcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCC-CchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCC
Q 006145 474 EATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 474 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 551 (659)
...++|...+.||+|+||.||+|+.. +++.||||++..... ...+++.+|++++++++||||+++++++..
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 84 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVV------- 84 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEES-------
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEee-------
Confidence 34578889999999999999999964 689999999865432 234678999999999999999999999976
Q ss_pred CceeEEEEeccCCCChhhhhcC-----CCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceE
Q 006145 552 VSRIFLIFEYVPNGTLRSWISE-----GHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAK 626 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~-----~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~k 626 (659)
.+..++||||+++|+|.+++.. ......+++..+..++.|+++||+|||+. +|+||||||+||++++++.+|
T Consensus 85 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~k 161 (303)
T 2vwi_A 85 KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQ 161 (303)
T ss_dssp SSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEE
T ss_pred cCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEE
Confidence 4568999999999999999863 11234689999999999999999999998 999999999999999999999
Q ss_pred EccCcccccccccc------ccceecccccccCCCCC
Q 006145 627 ISSYNLPLLAENAE------KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 627 l~DFGla~~~~~~~------~~~~~~gt~~y~aPE~~ 657 (659)
|+|||++....... ......||+.|+|||+.
T Consensus 162 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 198 (303)
T 2vwi_A 162 IADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM 198 (303)
T ss_dssp ECCCHHHHHCC---------------CCCTTCCHHHH
T ss_pred EEeccchheeccCCCccchhhhcccCCCccccCHHHh
Confidence 99999987553321 12346799999999964
No 275
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.93 E-value=1.2e-26 Score=242.37 Aligned_cols=176 Identities=19% Similarity=0.335 Sum_probs=146.1
Q ss_pred hhcCCCCCceeccCcCceEEEEEec--CCcEEEEEEecccCC--CchHHHHHHHHHHhCC---CCCCccceeeeeeeccc
Q 006145 475 ATNNFDTSAFMGEGSQGQMYRGRLK--NGTFVAIRCLKMKKC--HSTRNFMHHIELISKL---RHRHLVSALGHCFECYF 547 (659)
Q Consensus 475 ~~~~~~~~~~ig~G~~g~Vy~~~~~--~g~~vavK~l~~~~~--~~~~~~~~Ei~~l~~l---~H~niv~l~g~~~~~~~ 547 (659)
+.++|...+.||+|+||.||+|+.. +|+.||||+++.... .....+.+|+++++.+ +||||++++++|.....
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 4577889999999999999999973 588999999975432 2234677888877766 89999999999873211
Q ss_pred cCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEE
Q 006145 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKI 627 (659)
Q Consensus 548 ~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl 627 (659)
+ .....++||||++ |+|.+++.... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||
T Consensus 89 ~--~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl 161 (326)
T 1blx_A 89 D--RETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKL 161 (326)
T ss_dssp S--SEEEEEEEEECCS-CBHHHHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred C--CCceEEEEEecCC-CCHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEE
Confidence 1 1456899999998 69999997532 24589999999999999999999998 9999999999999999999999
Q ss_pred ccCccccccccccccceecccccccCCCCC
Q 006145 628 SSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 628 ~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
+|||+++............||+.|+|||+.
T Consensus 162 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~ 191 (326)
T 1blx_A 162 ADFGLARIYSFQMALTSVVVTLWYRAPEVL 191 (326)
T ss_dssp CSCCSCCCCCGGGGGCCCCCCCTTCCHHHH
T ss_pred ecCcccccccCCCCccccccccceeCHHHH
Confidence 999999877655555667899999999974
No 276
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=1.5e-26 Score=238.10 Aligned_cols=168 Identities=18% Similarity=0.286 Sum_probs=140.0
Q ss_pred CCCCceeccCcCceEEEEEecC----CcEEEEEEecccCC-CchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCc
Q 006145 479 FDTSAFMGEGSQGQMYRGRLKN----GTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 479 ~~~~~~ig~G~~g~Vy~~~~~~----g~~vavK~l~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
|...+.||+|+||.||+|+..+ +..||+|.+..... ...+.|.+|++++++++||||+++++++.+. ..
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~ 96 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPP------EG 96 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS------SS
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecC------CC
Confidence 4456899999999999998542 33799999975433 2346799999999999999999999999751 23
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCccc
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla 633 (659)
..++||||+.+|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 97 ~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~ 171 (298)
T 3pls_A 97 LPHVLLPYMCHGDLLQFIRSP--QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLA 171 (298)
T ss_dssp CCEEEECCCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSS
T ss_pred CcEEEEecccCCCHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCc
Confidence 358999999999999999853 35689999999999999999999998 9999999999999999999999999999
Q ss_pred ccccccc-----ccceecccccccCCCCC
Q 006145 634 LLAENAE-----KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 634 ~~~~~~~-----~~~~~~gt~~y~aPE~~ 657 (659)
+...... ......+|+.|+|||+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 200 (298)
T 3pls_A 172 RDILDREYYSVQQHRHARLPVKWTALESL 200 (298)
T ss_dssp CTTTTGGGGCSCCSSCTTCGGGGSCHHHH
T ss_pred ccccCCcccccccCcCCCCCccccChhhh
Confidence 7553322 22456788999999975
No 277
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.93 E-value=5.5e-27 Score=249.20 Aligned_cols=171 Identities=13% Similarity=0.239 Sum_probs=125.7
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC--chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ..+++.+|+++++.++||||+++++++...... ...
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~-~~~ 106 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL-EEF 106 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSG-GGC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcc-ccC
Confidence 367888899999999999999954 6999999999654322 345788999999999999999999998642110 012
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
...|+|+||+ +++|.++++. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---
T ss_pred CeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 4579999999 6899999874 4699999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccceecccccccCCCCC
Q 006145 633 PLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
++.... .....+||+.|+|||+.
T Consensus 179 a~~~~~--~~~~~~~t~~y~aPE~~ 201 (367)
T 2fst_X 179 ARHTAD--EMTGYVATRWYRAPEIM 201 (367)
T ss_dssp --------------CCCTTCCHHHH
T ss_pred cccccc--cCCCcCcCcCccChHHH
Confidence 986543 24457899999999964
No 278
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.93 E-value=1.4e-26 Score=240.84 Aligned_cols=174 Identities=16% Similarity=0.287 Sum_probs=137.4
Q ss_pred hcCCCCCceeccCcCceEEEEEecC-CcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeecccc------
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFD------ 548 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~------ 548 (659)
.++|...+.||+|+||.||+|+... |+.||||++........+++.+|++++++++||||+++++++......
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 3567888999999999999999764 999999999765544457799999999999999999999988532110
Q ss_pred -CCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeec-CCcceE
Q 006145 549 -DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD-QNLVAK 626 (659)
Q Consensus 549 -~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld-~~~~~k 626 (659)
.......++||||++ |+|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++ +++.+|
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~k 161 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLK 161 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEE
T ss_pred cccccCceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEE
Confidence 012357899999998 699999974 4689999999999999999999998 999999999999998 568999
Q ss_pred EccCccccccccc----cccceecccccccCCCCC
Q 006145 627 ISSYNLPLLAENA----EKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 627 l~DFGla~~~~~~----~~~~~~~gt~~y~aPE~~ 657 (659)
|+|||+++..... .......+|..|+|||+.
T Consensus 162 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 196 (320)
T 2i6l_A 162 IGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLL 196 (320)
T ss_dssp ECCCTTCBCC--------CCCGGGSCCTTCCHHHH
T ss_pred EccCccccccCCCcccccccccccccccccCcHHh
Confidence 9999999866432 122445679999999964
No 279
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.93 E-value=4.1e-27 Score=240.18 Aligned_cols=167 Identities=20% Similarity=0.389 Sum_probs=134.8
Q ss_pred hcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCcee
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~ 555 (659)
.++|...+.||+|+||.||+|+.. |+.||||+++... ..++|.+|++++++++||||+++++++.+. .+..
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~~~ 90 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEE------KGGL 90 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--------CC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcC------CCce
Confidence 466888899999999999999875 8899999997543 457799999999999999999999998641 3468
Q ss_pred EEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCccccc
Q 006145 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (659)
Q Consensus 556 ~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~ 635 (659)
++||||+++|+|.+++... ....+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 91 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~ 166 (278)
T 1byg_A 91 YIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKE 166 (278)
T ss_dssp EEEECCCTTEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC---
T ss_pred EEEEecCCCCCHHHHHHhc-ccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccc
Confidence 9999999999999999752 112378999999999999999999998 999999999999999999999999999976
Q ss_pred cccccccceecccccccCCCCC
Q 006145 636 AENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 636 ~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
.... .....+++.|+|||+.
T Consensus 167 ~~~~--~~~~~~~~~y~aPE~~ 186 (278)
T 1byg_A 167 ASST--QDTGKLPVKWTAPEAL 186 (278)
T ss_dssp -----------CCTTTSCHHHH
T ss_pred cccc--ccCCCccccccCHHHh
Confidence 5432 2334678899999964
No 280
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.93 E-value=1.5e-26 Score=249.44 Aligned_cols=165 Identities=19% Similarity=0.278 Sum_probs=125.0
Q ss_pred CceeccCcCceEEEEEec---CCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCceeEEE
Q 006145 482 SAFMGEGSQGQMYRGRLK---NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558 (659)
Q Consensus 482 ~~~ig~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~~lV 558 (659)
.++||+|+||+||+|+.. +++.||||++.... ..+.+.+|+++|++++|||||++++++... .....++|
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~~~~~lv 98 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSH-----ADRKVWLL 98 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEET-----TTTEEEEE
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecC-----CCCeEEEE
Confidence 468999999999999965 47899999997543 345789999999999999999999999652 24578999
Q ss_pred EeccCCCChhhhhcCC------CCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceee----cCCcceEEc
Q 006145 559 FEYVPNGTLRSWISEG------HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL----DQNLVAKIS 628 (659)
Q Consensus 559 ~Ey~~~GsL~~~l~~~------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl----d~~~~~kl~ 628 (659)
|||++ |+|.+++... .....+++..+..|+.|++.||+|||+. +|+||||||+|||+ ++++.+||+
T Consensus 99 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~ 174 (405)
T 3rgf_A 99 FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIA 174 (405)
T ss_dssp EECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred EeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEE
Confidence 99997 4888877521 1123599999999999999999999998 99999999999999 677999999
Q ss_pred cCccccccccc----cccceecccccccCCCCC
Q 006145 629 SYNLPLLAENA----EKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 629 DFGla~~~~~~----~~~~~~~gt~~y~aPE~~ 657 (659)
|||+++..... ......+||+.|+|||++
T Consensus 175 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 207 (405)
T 3rgf_A 175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELL 207 (405)
T ss_dssp CTTCCC----------------CCCTTCCHHHH
T ss_pred ECCCceecCCCCcccccCCCceecCcccCchhh
Confidence 99999876432 233557899999999965
No 281
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.93 E-value=1.9e-26 Score=239.14 Aligned_cols=172 Identities=15% Similarity=0.272 Sum_probs=134.1
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC---chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 551 (659)
.++|...+.||+|+||.||+|+.. +|+.||||+++..... ..+++.+|++++++++||||+++++++..
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------- 103 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE------- 103 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-------
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-------
Confidence 356888899999999999999964 6999999999754322 23568999999999999999999999986
Q ss_pred CceeEEEEeccCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccC
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 630 (659)
.+..++||||+++|+|.+++... .....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Df 180 (310)
T 2wqm_A 104 DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDL 180 (310)
T ss_dssp TTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred CCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEec
Confidence 45789999999999999998631 1234689999999999999999999998 9999999999999999999999999
Q ss_pred cccccccccc-ccceecccccccCCCCC
Q 006145 631 NLPLLAENAE-KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~~~~-~~~~~~gt~~y~aPE~~ 657 (659)
|+++...... ......|++.|+|||+.
T Consensus 181 g~~~~~~~~~~~~~~~~~~~~y~aPE~~ 208 (310)
T 2wqm_A 181 GLGRFFSSKTTAAHSLVGTPYYMSPERI 208 (310)
T ss_dssp ------------------CCSSCCHHHH
T ss_pred cceeeecCCCccccccCCCeeEeChHHh
Confidence 9997664332 23456799999999964
No 282
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.93 E-value=5e-27 Score=245.23 Aligned_cols=184 Identities=18% Similarity=0.359 Sum_probs=146.0
Q ss_pred CHHHHHHhhcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCC-CCCCccceeeeeeec
Q 006145 468 SLEELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFEC 545 (659)
Q Consensus 468 ~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~ 545 (659)
+++++....++|...+.||+|+||.||+|+.. +|+.||||++.... ...+++.+|+++++++ +||||+++++++...
T Consensus 15 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 93 (326)
T 2x7f_A 15 DLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKK 93 (326)
T ss_dssp -CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEEC
T ss_pred cchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeec
Confidence 33444456788999999999999999999974 69999999997543 3457899999999999 799999999999763
Q ss_pred cccCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcce
Q 006145 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVA 625 (659)
Q Consensus 546 ~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~ 625 (659)
... ...+..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+
T Consensus 94 ~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~ 168 (326)
T 2x7f_A 94 NPP-GMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEV 168 (326)
T ss_dssp C---CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCE
T ss_pred cCc-cccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCE
Confidence 211 11356899999999999999997532 24689999999999999999999998 99999999999999999999
Q ss_pred EEccCccccccccc-cccceecccccccCCCCC
Q 006145 626 KISSYNLPLLAENA-EKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 626 kl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~ 657 (659)
||+|||++...... .......||+.|+|||+.
T Consensus 169 kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~ 201 (326)
T 2x7f_A 169 KLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVI 201 (326)
T ss_dssp EECCCTTTC-------------CCGGGCCHHHH
T ss_pred EEeeCcCceecCcCccccccccCCccccChhhh
Confidence 99999999766432 223456799999999975
No 283
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.93 E-value=1e-26 Score=267.11 Aligned_cols=168 Identities=17% Similarity=0.252 Sum_probs=139.5
Q ss_pred hcCCCCCceeccCcCceEEEEEec--CCcEEEEEEecccCC-CchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK--NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~--~g~~vavK~l~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
.++|...+.||+|+||.||+|+.. +|+.||||++..... ...+.|.+|++++++++|||||+++++|...... ..
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~--~~ 156 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRH--GD 156 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTT--SC
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCC--CC
Confidence 367888999999999999999975 589999999865432 2235689999999999999999999999863210 11
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
...|+||||+++|+|.+++.. .++|.++..|+.||++||+|||+. +||||||||+|||++++ .+||+|||+
T Consensus 157 ~~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 157 PVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred ceeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEeccc
Confidence 226999999999999988753 589999999999999999999998 99999999999999986 899999999
Q ss_pred ccccccccccceecccccccCCCCC
Q 006145 633 PLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
++..... ....||+.|||||+.
T Consensus 228 a~~~~~~---~~~~gt~~y~aPE~~ 249 (681)
T 2pzi_A 228 VSRINSF---GYLYGTPGFQAPEIV 249 (681)
T ss_dssp CEETTCC---SCCCCCTTTSCTTHH
T ss_pred chhcccC---CccCCCccccCHHHH
Confidence 9876543 456799999999974
No 284
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.93 E-value=1.5e-26 Score=244.39 Aligned_cols=172 Identities=17% Similarity=0.304 Sum_probs=142.7
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC-chHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ...++.+|++++++++||||+++++++....+. ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~~~ 87 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFE--NFN 87 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCST--TCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccC--ccc
Confidence 467888899999999999999975 5999999999654322 235688999999999999999999998753221 135
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCccc
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla 633 (659)
..++||||++ |+|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLA 159 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccc
Confidence 6899999997 699999875 3689999999999999999999998 9999999999999999999999999999
Q ss_pred cccccccc-----------cceecccccccCCCCC
Q 006145 634 LLAENAEK-----------VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 634 ~~~~~~~~-----------~~~~~gt~~y~aPE~~ 657 (659)
+....... ....+||+.|+|||+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 194 (353)
T 2b9h_A 160 RIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVM 194 (353)
T ss_dssp EECC----------------CCCCCCGGGCCHHHH
T ss_pred cccccccccccCccccccchhhccccccccCCeee
Confidence 76542211 2235789999999963
No 285
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.93 E-value=1e-26 Score=243.15 Aligned_cols=172 Identities=23% Similarity=0.355 Sum_probs=139.1
Q ss_pred hcCCCCCceeccCcCceEEEEEec------CCcEEEEEEecccCC-CchHHHHHHHHHHhCCCCCCccceeeeeeecccc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 548 (659)
.++|...+.||+|+||.||+|+.. +++.||||.+..... ....++.+|+.++++++||||+++++++..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 104 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ---- 104 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC----
Confidence 467888899999999999999842 477999999964432 234579999999999999999999999975
Q ss_pred CCCCceeEEEEeccCCCChhhhhcCCCC----CCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecC---
Q 006145 549 DSSVSRIFLIFEYVPNGTLRSWISEGHA----HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ--- 621 (659)
Q Consensus 549 ~~~~~~~~lV~Ey~~~GsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~--- 621 (659)
....++||||+++|+|.+++..... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.
T Consensus 105 ---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~ 178 (327)
T 2yfx_A 105 ---SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 178 (327)
T ss_dssp ---SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSST
T ss_pred ---CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCC
Confidence 4567999999999999999985321 14589999999999999999999998 9999999999999994
Q ss_pred CcceEEccCcccccccccc---ccceecccccccCCCCC
Q 006145 622 NLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 622 ~~~~kl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~ 657 (659)
+..+||+|||+++...... ......+|+.|+|||+.
T Consensus 179 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 217 (327)
T 2yfx_A 179 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 217 (327)
T ss_dssp TCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHH
T ss_pred cceEEECccccccccccccccccCCCcCCCcceeCHhHh
Confidence 4569999999997553322 22345688999999964
No 286
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=1.4e-26 Score=255.25 Aligned_cols=215 Identities=20% Similarity=0.163 Sum_probs=190.5
Q ss_pred CCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEE
Q 006145 129 RLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVL 208 (659)
Q Consensus 129 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 208 (659)
.+++|+.|+|++|.+++..|..|.++++|++|+|++|.+++..| ++.+++|++|+|++|.+++..+ .++|+.|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 44589999999999999888999999999999999999997766 9999999999999999985432 3899999
Q ss_pred eccccccccCCCCCCCCCcCCEEEcccCCCCCCCCCC---CcccceEecCCCcCCccCchhcc-CCccccEEeccCcccc
Q 006145 209 ALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKV---GKKLVTMILSKNKFRSAIPAEVS-SYYQLQRLDLSSNRFV 284 (659)
Q Consensus 209 ~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~ 284 (659)
++++|.+++.++. .+++|+.|+|++|.+++..|.. +++|+.|+|++|.+++.+|..+. .+++|+.|+|++|.|+
T Consensus 105 ~L~~N~l~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 105 HAANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp ECCSSCCCCEEEC--CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred ECcCCcCCCCCcc--ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 9999999987664 4688999999999999887754 57899999999999998888886 7999999999999999
Q ss_pred cCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCcccc
Q 006145 285 GPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLA 356 (659)
Q Consensus 285 ~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~ 356 (659)
+. |. +..+++|+.|+|++|++++..| .+..+++|+.|++++|.+++ +|..+..++++..+++++|.+.
T Consensus 183 ~~-~~-~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 183 DV-KG-QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp EE-EC-CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBC
T ss_pred cc-cc-cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCc
Confidence 76 33 4469999999999999997655 48889999999999999995 8888888999999999999886
No 287
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.93 E-value=1.6e-26 Score=236.93 Aligned_cols=169 Identities=19% Similarity=0.303 Sum_probs=146.7
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccC--CCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK--CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
.++|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.. .
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~ 93 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-------S 93 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------S
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeC-------C
Confidence 456888999999999999999976 69999999996543 2345679999999999999999999999975 4
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCC---cceEEcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN---LVAKISS 629 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~---~~~kl~D 629 (659)
+..++||||+++++|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.+ +.+||+|
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~D 167 (287)
T 2wei_A 94 SSFYIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIID 167 (287)
T ss_dssp SEEEEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECS
T ss_pred CeEEEEEEccCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEec
Confidence 6789999999999999988752 3689999999999999999999998 99999999999999754 4799999
Q ss_pred CccccccccccccceecccccccCCCCC
Q 006145 630 YNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 630 FGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
||+++............||+.|+|||+.
T Consensus 168 fg~~~~~~~~~~~~~~~~~~~y~aPE~~ 195 (287)
T 2wei_A 168 FGLSTCFQQNTKMKDRIGTAYYIAPEVL 195 (287)
T ss_dssp TTGGGTBCCCSSCSCHHHHHTTCCHHHH
T ss_pred cCcceeecCCCccccccCcccccChHHh
Confidence 9999877655555566799999999964
No 288
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.93 E-value=8.2e-27 Score=245.89 Aligned_cols=172 Identities=10% Similarity=0.106 Sum_probs=136.7
Q ss_pred hcCCCCCceeccCcCceEEEEEec----CCcEEEEEEecccCCC-----------chHHHHHHHHHHhCCCCCCccceee
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCH-----------STRNFMHHIELISKLRHRHLVSALG 540 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~-----------~~~~~~~Ei~~l~~l~H~niv~l~g 540 (659)
.++|...+.||+|+||.||+|+.. ++..||||++...... ..+.+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 356888899999999999999975 5788999998754321 1234778899999999999999999
Q ss_pred eeeeccccCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeec
Q 006145 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620 (659)
Q Consensus 541 ~~~~~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld 620 (659)
++.... ......++||||+ +|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 116 ~~~~~~---~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~ 185 (345)
T 2v62_A 116 SGLTEF---KGRSYRFMVMERL-GIDLQKISGQN---GTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLG 185 (345)
T ss_dssp EEEEES---SSCEEEEEEEECE-EEEHHHHCBGG---GBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred cccccc---CCCcEEEEEEecc-CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEc
Confidence 997622 1245789999999 99999999853 3699999999999999999999998 999999999999999
Q ss_pred CCc--ceEEccCcccccccccc--------ccceecccccccCCCCC
Q 006145 621 QNL--VAKISSYNLPLLAENAE--------KVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 621 ~~~--~~kl~DFGla~~~~~~~--------~~~~~~gt~~y~aPE~~ 657 (659)
.++ .+||+|||+++...... ......||+.|+|||+.
T Consensus 186 ~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 232 (345)
T 2v62_A 186 YKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAH 232 (345)
T ss_dssp SSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHH
T ss_pred cCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHh
Confidence 887 99999999997663321 11456899999999974
No 289
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.93 E-value=1.1e-26 Score=238.12 Aligned_cols=172 Identities=13% Similarity=0.211 Sum_probs=129.8
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCc-h-HHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS-T-RNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~-~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
.++|...+.||+|+||.||+|+.. +|+.||||+++...... . +.+.++...++.++||||+++++++.+ .
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~-------~ 78 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-------E 78 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------S
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeec-------c
Confidence 466888899999999999999964 69999999997543221 2 234555556888999999999999986 4
Q ss_pred ceeEEEEeccCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 631 (659)
+..++||||++ |+|.+++... .....+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+||+|||
T Consensus 79 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T 3fme_A 79 GDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFG 155 (290)
T ss_dssp SSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC-
T ss_pred CCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecC
Confidence 56899999997 5888877531 1235799999999999999999999984 289999999999999999999999999
Q ss_pred cccccccccccceecccccccCCCCC
Q 006145 632 LPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 632 la~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
+++............||+.|+|||+.
T Consensus 156 ~~~~~~~~~~~~~~~~t~~y~aPE~~ 181 (290)
T 3fme_A 156 ISGYLVDDVAKDIDAGCKPYMAPERI 181 (290)
T ss_dssp --------------CCCCCCSCHHHH
T ss_pred CcccccccccccccCCCccccChhhc
Confidence 99877665555566899999999984
No 290
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.93 E-value=1.7e-26 Score=242.74 Aligned_cols=173 Identities=12% Similarity=0.248 Sum_probs=142.9
Q ss_pred hhcCCCCCceeccCcCceEEEEEe-cCCcEEEEEEecccCCC-chHHHHHHHHH-HhCCCCCCccceeeeeeeccccCCC
Q 006145 475 ATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH-STRNFMHHIEL-ISKLRHRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 475 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~~Ei~~-l~~l~H~niv~l~g~~~~~~~~~~~ 551 (659)
..++|...+.||+|+||.||+|+. .+|+.||||+++..... ...++..|+.+ ++.++||||+++++++..
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~------- 121 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR------- 121 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEEC-------
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEe-------
Confidence 456788889999999999999996 46999999999765332 23456666665 788899999999999976
Q ss_pred CceeEEEEeccCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccC
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 630 (659)
.+..++||||+++ +|.+++... .....+++..+..++.|+++||+|||+. .+|+||||||+||+++.++.+||+||
T Consensus 122 ~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~kl~Df 198 (340)
T 3an0_A 122 EGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDF 198 (340)
T ss_dssp SSCEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEEECCC
T ss_pred CCcEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeC
Confidence 4568999999975 999888631 1235799999999999999999999973 28999999999999999999999999
Q ss_pred ccccccccccccceecccccccCCCCC
Q 006145 631 NLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
|+++............||+.|+|||+.
T Consensus 199 g~~~~~~~~~~~~~~~gt~~y~aPE~~ 225 (340)
T 3an0_A 199 GISGYLVDSVAKTIDAGCKPYMAPERI 225 (340)
T ss_dssp SHHHHHSCHHHHHHSSCCCCCCCHHHH
T ss_pred CCceecccccccccCCCCccccCcccc
Confidence 999876554444456899999999974
No 291
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=1.3e-25 Score=228.49 Aligned_cols=206 Identities=24% Similarity=0.246 Sum_probs=125.1
Q ss_pred CCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEE
Q 006145 105 KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVL 184 (659)
Q Consensus 105 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 184 (659)
.+++|+.|++++|.+... ..+..+++|++|+|++|.+++ + ..+.++++|++|+|++|.+++..|..|..+++|++|
T Consensus 39 ~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 114 (272)
T 3rfs_A 39 ELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKEL 114 (272)
T ss_dssp HHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred cccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEE
Confidence 445555555555554321 124455555555555555543 1 244555555555555555554444445555555555
Q ss_pred EccCCcCCccCCcccCCCCCCcEEeccccccccCCCC-CCCCCcCCEEEcccCCCCCCCCCCCcccceEecCCCcCCccC
Q 006145 185 SLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAI 263 (659)
Q Consensus 185 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~ 263 (659)
+|++|++++..|..|+++++|++|++++|++++.++. +..+++|+ .|++++|++++..
T Consensus 115 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~---------------------~L~l~~n~l~~~~ 173 (272)
T 3rfs_A 115 VLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLT---------------------ELDLSYNQLQSLP 173 (272)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC---------------------EEECCSSCCCCCC
T ss_pred ECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCC---------------------EEECCCCCcCccC
Confidence 5555555544444455555555555555555544433 34444444 4444555555555
Q ss_pred chhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCC
Q 006145 264 PAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAG 342 (659)
Q Consensus 264 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~ 342 (659)
+..+..+++|+.|+|++|++++..|..+..+++|+.|++++|.+.+. ++.|+.++++.|+++|.+|..++.+
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 174 EGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCB
T ss_pred HHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCccccc
Confidence 66677888888888888888887777788888888888888887754 4567888888888888888877653
No 292
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.93 E-value=7e-27 Score=247.11 Aligned_cols=166 Identities=13% Similarity=0.179 Sum_probs=138.5
Q ss_pred hcCCCCCceeccCcCceEEEEEecC---------CcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccc---------
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLKN---------GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVS--------- 537 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~~---------g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~--------- 537 (659)
.++|...+.||+|+||.||+|+... ++.||||.+... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3578888999999999999999763 789999998743 46889999999999999998
Q ss_pred ------eeeeeeeccccCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccC
Q 006145 538 ------ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNN 611 (659)
Q Consensus 538 ------l~g~~~~~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrD 611 (659)
+++++.. .....++||||+ +|+|.+++... ....+++..+..++.|+++||+|||+. +|+|||
T Consensus 116 ~~~i~~~~~~~~~------~~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~D 184 (352)
T 2jii_A 116 LLAIPTCMGFGVH------QDKYRFLVLPSL-GRSLQSALDVS-PKHVLSERSVLQVACRLLDALEFLHEN---EYVHGN 184 (352)
T ss_dssp TCSCCCCCEEEEE------TTTEEEEEEECC-CEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSC
T ss_pred ccCccchhhcccc------CCcEEEEEecCC-CcCHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCC
Confidence 5566653 145789999999 99999999853 125699999999999999999999998 999999
Q ss_pred CCCCceeecCCc--ceEEccCccccccccccc--------cceecccccccCCCCC
Q 006145 612 LKITDILLDQNL--VAKISSYNLPLLAENAEK--------VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 612 lk~~NILld~~~--~~kl~DFGla~~~~~~~~--------~~~~~gt~~y~aPE~~ 657 (659)
|||+||+++.++ .+||+|||+++....... .....||+.|+|||+.
T Consensus 185 ikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 240 (352)
T 2jii_A 185 VTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLH 240 (352)
T ss_dssp CCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHH
T ss_pred CCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHH
Confidence 999999999998 999999999976643221 1345899999999975
No 293
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.93 E-value=2.8e-26 Score=244.29 Aligned_cols=170 Identities=15% Similarity=0.254 Sum_probs=138.0
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCc--hHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~--~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
.++|...+.||+|+||.||+|+.. +|+.||||++....... .+++.+|++++++++||||+++++++...... ...
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~~ 119 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSL-RNF 119 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSS-TTC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCc-ccc
Confidence 457888899999999999999965 59999999997543322 35789999999999999999999999752210 011
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
...++||||+. |+|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 23499999997 699888753 489999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccceecccccccCCCCC
Q 006145 633 PLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
++.... .....+||+.|+|||+.
T Consensus 191 a~~~~~--~~~~~~~t~~y~aPE~~ 213 (371)
T 4exu_A 191 ARHADA--EMTGYVVTRWYRAPEVI 213 (371)
T ss_dssp C----------CTTCCCTTSCHHHH
T ss_pred cccccc--CcCCcccCccccCHHHh
Confidence 986643 23456889999999975
No 294
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.93 E-value=3.5e-26 Score=235.23 Aligned_cols=168 Identities=14% Similarity=0.191 Sum_probs=142.8
Q ss_pred hcCCCCCceeccCcCceEEEEEe-cCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCce
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 554 (659)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ..+++.+|+++++.++|++++..++++... .+.
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~------~~~ 79 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAE------GDY 79 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEE------TTE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCC------CCc
Confidence 46788899999999999999996 569999999987544 235689999999999999988888777541 456
Q ss_pred eEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceee---cCCcceEEccCc
Q 006145 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL---DQNLVAKISSYN 631 (659)
Q Consensus 555 ~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---d~~~~~kl~DFG 631 (659)
.++||||+ +|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||++ ++++.+||+|||
T Consensus 80 ~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg 153 (296)
T 3uzp_A 80 NVMVMELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFG 153 (296)
T ss_dssp EEEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCT
T ss_pred eEEEEEec-CCCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCC
Confidence 89999999 99999999742 24699999999999999999999998 99999999999999 578999999999
Q ss_pred cccccccccc--------cceecccccccCCCCC
Q 006145 632 LPLLAENAEK--------VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 632 la~~~~~~~~--------~~~~~gt~~y~aPE~~ 657 (659)
+++....... .....||+.|+|||+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 187 (296)
T 3uzp_A 154 LAKKYRDARTHQHIPYRENKNLTGTARYASINTH 187 (296)
T ss_dssp TCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHH
T ss_pred CcccccccccccccccccccccccccccCChhhh
Confidence 9976644322 2456899999999975
No 295
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.93 E-value=3.3e-26 Score=248.38 Aligned_cols=167 Identities=19% Similarity=0.234 Sum_probs=140.5
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCC------CCCCccceeeeeeecccc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKL------RHRHLVSALGHCFECYFD 548 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l------~H~niv~l~g~~~~~~~~ 548 (659)
..+|...+.||+|+||+||+|+.. +++.||||+++... ...+++.+|+++++.+ +|+||+++++++..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~---- 170 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF---- 170 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE----
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc----
Confidence 456888899999999999999865 58999999997532 2235678888888776 57799999999986
Q ss_pred CCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcc--eE
Q 006145 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV--AK 626 (659)
Q Consensus 549 ~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~--~k 626 (659)
....++||||+. |+|.+++.... ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++. +|
T Consensus 171 ---~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vk 242 (429)
T 3kvw_A 171 ---RNHICMTFELLS-MNLYELIKKNK-FQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIK 242 (429)
T ss_dssp ---TTEEEEEECCCC-CBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEE
T ss_pred ---CCeEEEEEeccC-CCHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceE
Confidence 567899999996 69999987532 24599999999999999999999998 9999999999999999887 99
Q ss_pred EccCccccccccccccceecccccccCCCCC
Q 006145 627 ISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 627 l~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
|+|||+++.... .....+||+.|||||++
T Consensus 243 L~DFG~a~~~~~--~~~~~~gt~~y~aPE~~ 271 (429)
T 3kvw_A 243 VIDFGSSCYEHQ--RVYTYIQSRFYRAPEVI 271 (429)
T ss_dssp ECCCTTCEETTC--CCCSSCSCGGGCCHHHH
T ss_pred EeecccceecCC--cccccCCCCCccChHHH
Confidence 999999976543 33456899999999974
No 296
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.93 E-value=4.1e-26 Score=234.57 Aligned_cols=169 Identities=14% Similarity=0.185 Sum_probs=139.8
Q ss_pred hhcCCCCCceeccCcCceEEEEEe-cCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCc
Q 006145 475 ATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 475 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
..++|...+.||+|+||.||+|+. .+++.||||++..... .+++.+|+++++.++|++++..+++|... .+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~------~~ 78 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAE------GD 78 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEE------TT
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCC------CC
Confidence 457799999999999999999996 4699999998765432 34688999999999999988888887642 45
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceee---cCCcceEEccC
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL---DQNLVAKISSY 630 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---d~~~~~kl~DF 630 (659)
..++||||+ +|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||++ ++++.+||+||
T Consensus 79 ~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Df 152 (296)
T 4hgt_A 79 YNVMVMELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDF 152 (296)
T ss_dssp EEEEEEECC-CCBHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCC
T ss_pred ceEEEEEcc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecC
Confidence 689999999 99999999742 24699999999999999999999998 99999999999999 78899999999
Q ss_pred ccccccccccc--------cceecccccccCCCCC
Q 006145 631 NLPLLAENAEK--------VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~~~~~--------~~~~~gt~~y~aPE~~ 657 (659)
|+++....... .....||+.|+|||+.
T Consensus 153 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 187 (296)
T 4hgt_A 153 GLAKKYRDARTHQHIPYRENKNLTGTARYASINTH 187 (296)
T ss_dssp TTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHH
T ss_pred ccceeccCcccCccCCCCcccccCCCccccchHHh
Confidence 99976644322 2356899999999975
No 297
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=9.2e-25 Score=222.63 Aligned_cols=207 Identities=20% Similarity=0.148 Sum_probs=177.1
Q ss_pred CCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEec
Q 006145 131 SSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLAL 210 (659)
Q Consensus 131 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 210 (659)
++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+++..|..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 47999999999999877778999999999999999998877778999999999999999999888888999999999999
Q ss_pred cccccccCCC-CCCCCCcCCEEEcccCCCCCCCCCCCcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCch
Q 006145 211 SNNHFYGEVP-DFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQ 289 (659)
Q Consensus 211 s~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 289 (659)
++|++++..+ .+..+++|++|++++|.+++ ..+|..+..+++|+.|+|++|++++..+.
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~--------------------~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~ 167 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQS--------------------FKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCC--------------------CCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccce--------------------ecCchhhccCCCCCEEECCCCCCCcCCHH
Confidence 9999888766 47788888888777776532 12578899999999999999999988888
Q ss_pred hhcCCCccc----EEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCccccCC
Q 006145 290 ALLSLPSIT----YLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAG 358 (659)
Q Consensus 290 ~l~~l~~L~----~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~~~ 358 (659)
.+..+++|+ .|++++|++++..+..+. ..+|+.|++++|++++..+..+..+++++.+++++|.+++.
T Consensus 168 ~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 168 DLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp GGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred HhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCccccc
Confidence 887777777 899999999977666554 45899999999999977666778899999999999999853
No 298
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.93 E-value=4e-26 Score=260.11 Aligned_cols=171 Identities=19% Similarity=0.299 Sum_probs=140.8
Q ss_pred HhhcCCCCCceeccCcCceEEEEEecC----CcEEEEEEecccCCC-chHHHHHHHHHHhCCCCCCccceeeeeeecccc
Q 006145 474 EATNNFDTSAFMGEGSQGQMYRGRLKN----GTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (659)
Q Consensus 474 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 548 (659)
...++|...+.||+|+||.||+|++.. +..||||+++..... ..++|.+|+.++++++|||||+++|++.+
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~---- 462 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE---- 462 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec----
Confidence 345678888999999999999998642 568999998754322 23679999999999999999999999853
Q ss_pred CCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEc
Q 006145 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (659)
Q Consensus 549 ~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~ 628 (659)
+..++||||+++|+|.++++.. ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+
T Consensus 463 ----~~~~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~ 533 (656)
T 2j0j_A 463 ----NPVWIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLG 533 (656)
T ss_dssp ----SSCEEEEECCTTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEEC
T ss_pred ----CceEEEEEcCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEE
Confidence 4579999999999999999853 24689999999999999999999998 99999999999999999999999
Q ss_pred cCccccccccccc--cceecccccccCCCCC
Q 006145 629 SYNLPLLAENAEK--VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 629 DFGla~~~~~~~~--~~~~~gt~~y~aPE~~ 657 (659)
|||+++....... .....+|+.|||||+.
T Consensus 534 DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~ 564 (656)
T 2j0j_A 534 DFGLSRYMEDSTYYKASKGKLPIKWMAPESI 564 (656)
T ss_dssp CCCCCCSCCC----------CCGGGCCHHHH
T ss_pred ecCCCeecCCCcceeccCCCCCcceeCHHHh
Confidence 9999987644332 2345677899999964
No 299
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.93 E-value=4.9e-26 Score=240.66 Aligned_cols=170 Identities=15% Similarity=0.253 Sum_probs=137.7
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCc--hHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~--~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
.++|...+.||+|+||.||+|+.. +|+.||||++....... .+++.+|++++++++||||+++++++...... ...
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-~~~ 101 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSL-RNF 101 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSG-GGC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccc-ccc
Confidence 356778899999999999999965 59999999997543222 35789999999999999999999998752110 001
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
...++||||++ |+|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccc
Confidence 23599999997 699988753 489999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccceecccccccCCCCC
Q 006145 633 PLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 633 a~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
++.... ......||+.|+|||+.
T Consensus 173 ~~~~~~--~~~~~~~t~~y~aPE~~ 195 (353)
T 3coi_A 173 ARHADA--EMTGYVVTRWYRAPEVI 195 (353)
T ss_dssp TTC----------CCSBCCSCHHHH
T ss_pred ccCCCC--CccccccCcCcCCHHHH
Confidence 986543 23456889999999964
No 300
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.93 E-value=2.3e-26 Score=236.00 Aligned_cols=169 Identities=21% Similarity=0.349 Sum_probs=131.7
Q ss_pred hcCCCCCceeccCcCceEEEEEec--CCc--EEEEEEecccCC---CchHHHHHHHHHHhCCCCCCccceeeeeeecccc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK--NGT--FVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~--~g~--~vavK~l~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 548 (659)
.++|...+.||+|+||.||+|++. +++ .||||+++.... ...+++.+|++++++++||||+++++++.+
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 92 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT---- 92 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc----
Confidence 356788899999999999999854 233 699999875432 234679999999999999999999999875
Q ss_pred CCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEc
Q 006145 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (659)
Q Consensus 549 ~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~ 628 (659)
...++||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 93 ----~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~ 163 (291)
T 1u46_A 93 ----PPMKMVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIG 163 (291)
T ss_dssp ----SSCEEEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEEC
T ss_pred ----CCceeeEecccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEc
Confidence 2379999999999999999752 23589999999999999999999998 99999999999999999999999
Q ss_pred cCccccccccccc----cceecccccccCCCCC
Q 006145 629 SYNLPLLAENAEK----VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 629 DFGla~~~~~~~~----~~~~~gt~~y~aPE~~ 657 (659)
|||+++....... .....+|..|+|||+.
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 196 (291)
T 1u46_A 164 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 196 (291)
T ss_dssp CCTTCEECCC-CCEEEC-----CCGGGCCHHHH
T ss_pred cccccccccccccchhhhccCCCCceeeCchhh
Confidence 9999976643321 2345678899999964
No 301
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=3.1e-24 Score=218.09 Aligned_cols=203 Identities=23% Similarity=0.240 Sum_probs=130.7
Q ss_pred CCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEcc
Q 006145 108 DLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR 187 (659)
Q Consensus 108 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 187 (659)
+++.+++++++++. +|..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|.++...+..|..+++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 35667777776654 444333 466677777777665555566666777777777766665444455666666666666
Q ss_pred CCcCCccCCcccCCCCCCcEEeccccccccCCCC-CCCCCcCCEEEcccCCCCCCCCCCCcccceEecCCCcCCccCchh
Q 006145 188 NNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAE 266 (659)
Q Consensus 188 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~ 266 (659)
+|.+++..+..|.++++|++|+|++|++++..+. |..+++|++|+|++|.+ ++..+..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l---------------------~~~~~~~ 152 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNEL---------------------QSLPKGV 152 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC---------------------CCCCTTT
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcC---------------------CccCHhH
Confidence 6666655555566666666666666666655544 55555555555555544 3434444
Q ss_pred ccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCccc
Q 006145 267 VSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQ 334 (659)
Q Consensus 267 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ 334 (659)
|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+..+++|+.|++++|.+...
T Consensus 153 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 153 FDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred ccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 66677777777777777766666677777777777777777766666677777777777777776543
No 302
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.93 E-value=1.3e-26 Score=246.92 Aligned_cols=173 Identities=6% Similarity=-0.049 Sum_probs=124.8
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC---chHHHHHHH---HHHhCCCCCCcccee-------ee
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---STRNFMHHI---ELISKLRHRHLVSAL-------GH 541 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~~Ei---~~l~~l~H~niv~l~-------g~ 541 (659)
..+|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+ ++|+. +||||++++ ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence 345778899999999999999965 6999999999875432 234577784 55666 799988855 33
Q ss_pred eeecccc----------CCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHH------HHHHHHHHHHhhhhcCCCCC
Q 006145 542 CFECYFD----------DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQR------ISAAIGVAKGIQFLHTGIVP 605 (659)
Q Consensus 542 ~~~~~~~----------~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~------~~i~~~ia~~L~yLH~~~~~ 605 (659)
+...... .......|+|||||+ |+|.+++.... ..+.+..+ ..++.|+++||+|||+.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~--- 213 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD--FVYVFRGDEGILALHILTAQLIRLAANLQSK--- 213 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH--HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc--cccchhhhhhhhhHHHHHHHHHHHHHHHHHC---
Confidence 3321100 000144799999999 89999998521 23455556 78889999999999998
Q ss_pred CccccCCCCCceeecCCcceEEccCccccccccccccceecccccccCCCCC
Q 006145 606 GVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 606 ~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
+|+||||||+|||++.++.+||+|||+++..... .....+|+.|+|||+.
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~--~~~~~~t~~y~aPE~~ 263 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR--GPASSVPVTYAPREFL 263 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTCE--EEGGGSCGGGCCHHHH
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCCC--ccCccCCcCCcChhhc
Confidence 9999999999999999999999999999866432 2245677999999975
No 303
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.92 E-value=3.6e-26 Score=256.74 Aligned_cols=179 Identities=18% Similarity=0.218 Sum_probs=147.8
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCC-CchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
.++|...+.||+|+||.||+|+.. +|+.||||+++.... ...++|.+|++++++++||||+++++++..... ....+
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~-~~~~~ 91 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQK-LAPND 91 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCC-CCTTS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeeccccc-ccCCC
Confidence 367999999999999999999964 599999999875432 234579999999999999999999998754111 11245
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcc---eEEccC
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV---AKISSY 630 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~---~kl~DF 630 (659)
..++||||+++|+|.+++........+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccc
Confidence 6799999999999999998644444689999999999999999999998 9999999999999997654 999999
Q ss_pred ccccccccccccceecccccccCCCCCC
Q 006145 631 NLPLLAENAEKVGHVIPYSGSIDPTNSA 658 (659)
Q Consensus 631 Gla~~~~~~~~~~~~~gt~~y~aPE~~~ 658 (659)
|+++............||+.|+|||+..
T Consensus 169 G~a~~~~~~~~~~~~~gt~~Y~APE~l~ 196 (676)
T 3qa8_A 169 GYAKELDQGELCTEFVGTLQYLAPELLE 196 (676)
T ss_dssp CCCCBTTSCCCCCCCCSCCTTCSSCSSC
T ss_pred ccccccccccccccccCCcccCChHHhc
Confidence 9998876666566778999999999864
No 304
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.92 E-value=1.2e-25 Score=235.09 Aligned_cols=172 Identities=11% Similarity=0.205 Sum_probs=125.1
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC-chHHHHHHHH-HHhCCCCCCccceeeeeeeccccCCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-STRNFMHHIE-LISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~~Ei~-~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
.++|...+.||+|+||.||+|+.. +|+.||||+++..... ...++.+|+. +++.++||||+++++++.. .
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~-------~ 93 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFR-------E 93 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEEC-------S
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEe-------C
Confidence 467788899999999999999975 6999999999765322 2345666666 7888899999999999986 4
Q ss_pred ceeEEEEeccCCCChhhhhcC--CCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccC
Q 006145 553 SRIFLIFEYVPNGTLRSWISE--GHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~--~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 630 (659)
+..++||||+++ +|.+++.. ......+++..+..++.|+++||+|||+. ++|+||||||+||+++.++.+||+||
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Df 170 (327)
T 3aln_A 94 GDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDF 170 (327)
T ss_dssp SEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCC
T ss_pred CceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccC
Confidence 678999999985 88877752 11135689999999999999999999984 38999999999999999999999999
Q ss_pred ccccccccccccceecccccccCCCCC
Q 006145 631 NLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
|+++............||+.|+|||+.
T Consensus 171 g~~~~~~~~~~~~~~~gt~~y~aPE~~ 197 (327)
T 3aln_A 171 GISGQLVDSIAKTRDAGCRPYMAPERI 197 (327)
T ss_dssp SSSCC----------------------
T ss_pred CCceecccccccccCCCCccccCceee
Confidence 999877555445556899999999986
No 305
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.92 E-value=1.9e-26 Score=239.37 Aligned_cols=171 Identities=19% Similarity=0.239 Sum_probs=138.6
Q ss_pred HHhhcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC------chHHHHHHHHHHhCC----CCCCccceeee
Q 006145 473 EEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH------STRNFMHHIELISKL----RHRHLVSALGH 541 (659)
Q Consensus 473 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~------~~~~~~~Ei~~l~~l----~H~niv~l~g~ 541 (659)
....++|...+.||+|+||.||+|+.. +++.||||++...... ....+.+|++++.++ +|+||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 344678999999999999999999864 5899999999754321 223467899999888 89999999999
Q ss_pred eeeccccCCCCceeEEEEec-cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeec
Q 006145 542 CFECYFDDSSVSRIFLIFEY-VPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620 (659)
Q Consensus 542 ~~~~~~~~~~~~~~~lV~Ey-~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld 620 (659)
+.. .+..++|||| +++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++
T Consensus 107 ~~~-------~~~~~~v~e~~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~ 173 (312)
T 2iwi_A 107 FET-------QEGFMLVLERPLPAQDLFDYITEK---GPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILID 173 (312)
T ss_dssp C------------CEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEE
T ss_pred Eec-------CCeEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEe
Confidence 875 4568999999 7899999999852 4689999999999999999999998 999999999999999
Q ss_pred -CCcceEEccCccccccccccccceecccccccCCCCC
Q 006145 621 -QNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 621 -~~~~~kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
+++.+||+|||+++..... ......||..|+|||+.
T Consensus 174 ~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~ 210 (312)
T 2iwi_A 174 LRRGCAKLIDFGSGALLHDE-PYTDFDGTRVYSPPEWI 210 (312)
T ss_dssp TTTTEEEECCCSSCEECCSS-CBCCCCSCTTTSCHHHH
T ss_pred CCCCeEEEEEcchhhhcccC-cccccCCcccccCceee
Confidence 8899999999999876543 34556799999999964
No 306
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.92 E-value=3.8e-26 Score=237.64 Aligned_cols=170 Identities=21% Similarity=0.378 Sum_probs=139.8
Q ss_pred HHhhcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCC--CchHHHHHHHHHHhCCCCCCccceeeeeeeccccCC
Q 006145 473 EEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (659)
Q Consensus 473 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 550 (659)
....++|...+.||+|+||.||+|+... .||+|.++.... ...+.|.+|++++++++||||+++++++.+
T Consensus 29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 100 (319)
T 2y4i_B 29 DIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS------ 100 (319)
T ss_dssp SSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC------
T ss_pred cCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec------
Confidence 3446778889999999999999998753 499999975432 233568899999999999999999999986
Q ss_pred CCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccC
Q 006145 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (659)
Q Consensus 551 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 630 (659)
.+..++||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++ ++.+||+||
T Consensus 101 -~~~~~iv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Df 173 (319)
T 2y4i_B 101 -PPHLAIITSLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDF 173 (319)
T ss_dssp -SSCEEEECBCCCSEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCC
T ss_pred -CCceEEEeecccCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeec
Confidence 45689999999999999999853 24689999999999999999999998 999999999999998 679999999
Q ss_pred cccccccc------ccccceecccccccCCCCC
Q 006145 631 NLPLLAEN------AEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~~------~~~~~~~~gt~~y~aPE~~ 657 (659)
|+++.... ........||+.|+|||+.
T Consensus 174 g~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~ 206 (319)
T 2y4i_B 174 GLFSISGVLQAGRREDKLRIQNGWLCHLAPEII 206 (319)
T ss_dssp SCCC----------CCSCBCCSGGGGTSCHHHH
T ss_pred CCccccccccccccccccccCCCcccccChHHh
Confidence 99865421 1222445699999999975
No 307
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.92 E-value=5.5e-26 Score=246.67 Aligned_cols=167 Identities=16% Similarity=0.212 Sum_probs=131.8
Q ss_pred hcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCC-CCCCccceeeeeeeccccCCCCce
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVSR 554 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~~~~ 554 (659)
..+|...+.||+|+||+||.....+|+.||||++.... ...+.+|+++++++ +|||||++++++.+ ...
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~-------~~~ 92 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKD-------RQF 92 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEE-------TTE
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEec-------CCE
Confidence 34577789999999999665555679999999996533 23467899999999 79999999999876 467
Q ss_pred eEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecC-----CcceEEcc
Q 006145 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ-----NLVAKISS 629 (659)
Q Consensus 555 ~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~-----~~~~kl~D 629 (659)
.|+||||++ |+|.+++.... ....+..+..++.|+++||+|||+. +|+||||||+|||++. ...+||+|
T Consensus 93 ~~lv~E~~~-g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~D 166 (432)
T 3p23_A 93 QYIAIELCA-ATLQEYVEQKD--FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISD 166 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSS--CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECC
T ss_pred EEEEEECCC-CCHHHHHHhcC--CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEec
Confidence 899999996 59999998532 2345556778999999999999998 9999999999999953 34688999
Q ss_pred Cccccccccc----cccceecccccccCCCCCC
Q 006145 630 YNLPLLAENA----EKVGHVIPYSGSIDPTNSA 658 (659)
Q Consensus 630 FGla~~~~~~----~~~~~~~gt~~y~aPE~~~ 658 (659)
||+++..... ......+||+.|||||++.
T Consensus 167 FG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~ 199 (432)
T 3p23_A 167 FGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLS 199 (432)
T ss_dssp TTEEECC------------CCSCTTSCCGGGTS
T ss_pred ccceeeccCCCcceeeccccCCCcCccChhhhh
Confidence 9999776433 2234578999999999864
No 308
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.92 E-value=5.5e-26 Score=236.98 Aligned_cols=170 Identities=18% Similarity=0.213 Sum_probs=145.0
Q ss_pred HhhcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC------chHHHHHHHHHHhCCC--CCCccceeeeeee
Q 006145 474 EATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH------STRNFMHHIELISKLR--HRHLVSALGHCFE 544 (659)
Q Consensus 474 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~------~~~~~~~Ei~~l~~l~--H~niv~l~g~~~~ 544 (659)
...++|...+.||+|+||.||+|+.. +++.||||+++..... ..+.+.+|++++++++ |+||+++++++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 34567888999999999999999854 6899999999765422 2245788999999996 5999999999976
Q ss_pred ccccCCCCceeEEEEeccCC-CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeec-CC
Q 006145 545 CYFDDSSVSRIFLIFEYVPN-GTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD-QN 622 (659)
Q Consensus 545 ~~~~~~~~~~~~lV~Ey~~~-GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld-~~ 622 (659)
.+..++||||+.+ ++|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++ ++
T Consensus 120 -------~~~~~lv~e~~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~ 186 (320)
T 3a99_A 120 -------PDSFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNR 186 (320)
T ss_dssp -------SSEEEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTT
T ss_pred -------CCcEEEEEEcCCCCccHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCC
Confidence 5678999999986 899999975 24689999999999999999999998 999999999999999 78
Q ss_pred cceEEccCccccccccccccceecccccccCCCCC
Q 006145 623 LVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 623 ~~~kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
+.+||+|||+++..... ......||+.|+|||+.
T Consensus 187 ~~~kL~Dfg~~~~~~~~-~~~~~~gt~~y~aPE~~ 220 (320)
T 3a99_A 187 GELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWI 220 (320)
T ss_dssp TEEEECCCTTCEECCSS-CBCCCCSCGGGSCHHHH
T ss_pred CCEEEeeCccccccccc-cccCCCCCccCCChHHh
Confidence 99999999999876543 33456799999999964
No 309
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.92 E-value=1.8e-25 Score=245.25 Aligned_cols=168 Identities=14% Similarity=0.173 Sum_probs=138.4
Q ss_pred hcCCCCCceeccCcCceEEEEEe-cCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCce
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 554 (659)
.++|...+.||+|+||.||+|+. .+++.||||++..... ..++.+|+++++.++|++.+..+.++... .+.
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~------~~~ 77 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVE------GDY 77 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEE------TTE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEee------CCE
Confidence 36788899999999999999996 4699999998865442 34688999999999875555444444321 457
Q ss_pred eEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceee---cCCcceEEccCc
Q 006145 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL---DQNLVAKISSYN 631 (659)
Q Consensus 555 ~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---d~~~~~kl~DFG 631 (659)
.++||||+ +|+|.+++... ...+++..+..|+.||+.||+|||+. +||||||||+|||+ ++++.+||+|||
T Consensus 78 ~~lvme~~-g~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFG 151 (483)
T 3sv0_A 78 NVLVMDLL-GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFG 151 (483)
T ss_dssp EEEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCT
T ss_pred EEEEEECC-CCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCC
Confidence 89999999 99999999742 24699999999999999999999998 99999999999999 688999999999
Q ss_pred cccccccccc--------cceecccccccCCCCC
Q 006145 632 LPLLAENAEK--------VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 632 la~~~~~~~~--------~~~~~gt~~y~aPE~~ 657 (659)
+++....... .....||+.|+|||+.
T Consensus 152 la~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~ 185 (483)
T 3sv0_A 152 LAKKYRDTSTHQHIPYRENKNLTGTARYASVNTH 185 (483)
T ss_dssp TCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHH
T ss_pred cceeccCCccccccccccccccCCCccccCHHHh
Confidence 9987644322 2367899999999975
No 310
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.92 E-value=1.1e-25 Score=233.85 Aligned_cols=169 Identities=14% Similarity=0.258 Sum_probs=139.0
Q ss_pred HhhcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCC--chHHHHHHHHHHhCCC--CCCccceeeeeeeccccC
Q 006145 474 EATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLR--HRHLVSALGHCFECYFDD 549 (659)
Q Consensus 474 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~--~~~~~~~Ei~~l~~l~--H~niv~l~g~~~~~~~~~ 549 (659)
...++|...+.||+|+||.||+|+..+++.||||++...... ..+++.+|++++.+++ |+||+++++++..
T Consensus 25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~----- 99 (313)
T 3cek_A 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT----- 99 (313)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC-----
T ss_pred eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec-----
Confidence 345678888999999999999999888999999999754432 2367999999999997 5999999999976
Q ss_pred CCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEcc
Q 006145 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISS 629 (659)
Q Consensus 550 ~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~D 629 (659)
.+..++||| +.+|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||++++ +.+||+|
T Consensus 100 --~~~~~lv~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~D 169 (313)
T 3cek_A 100 --DQYIYMVME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLID 169 (313)
T ss_dssp --SSEEEEEEC-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECC
T ss_pred --CCEEEEEEe-cCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEee
Confidence 457899999 5688999999863 4689999999999999999999998 9999999999999974 8999999
Q ss_pred Cccccccccccc---cceecccccccCCCCC
Q 006145 630 YNLPLLAENAEK---VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 630 FGla~~~~~~~~---~~~~~gt~~y~aPE~~ 657 (659)
||+++....... .....||+.|+|||+.
T Consensus 170 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 200 (313)
T 3cek_A 170 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 200 (313)
T ss_dssp CSSSCC--------------CCGGGCCHHHH
T ss_pred ccccccccCccccccccCCCCCCCcCCHHHH
Confidence 999976643322 2456799999999975
No 311
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.92 E-value=2.7e-25 Score=233.40 Aligned_cols=170 Identities=18% Similarity=0.224 Sum_probs=121.4
Q ss_pred hcCCCCC-ceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCCc
Q 006145 476 TNNFDTS-AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 476 ~~~~~~~-~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
.++|... +.||+|+||.||+|+.. +|+.||||++... .+...+....++.++||||+++++++..... ...
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~---~~~ 99 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHH---GKR 99 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET---TEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccC---CCc
Confidence 4667774 56999999999999976 5999999998642 1222223334667799999999999875221 134
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecC---CcceEEccC
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ---NLVAKISSY 630 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~---~~~~kl~DF 630 (659)
..++||||+++|+|.+++... ....+++..+..++.|+++||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 100 ~~~lv~e~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Df 175 (336)
T 3fhr_A 100 CLLIIMECMEGGELFSRIQER-GDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDF 175 (336)
T ss_dssp EEEEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred eEEEEEeccCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecc
Confidence 579999999999999999863 234699999999999999999999998 9999999999999986 456999999
Q ss_pred ccccccccccccceecccccccCCCCC
Q 006145 631 NLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 631 Gla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
|+++..... ......||+.|+|||+.
T Consensus 176 g~~~~~~~~-~~~~~~~t~~y~aPE~~ 201 (336)
T 3fhr_A 176 GFAKETTQN-ALQTPCYTPYYVAPEVL 201 (336)
T ss_dssp TTCEEC---------------------
T ss_pred ccceecccc-ccccCCCCcCccChhhh
Confidence 999766432 33456889999999986
No 312
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.92 E-value=1.1e-25 Score=235.71 Aligned_cols=167 Identities=19% Similarity=0.271 Sum_probs=140.6
Q ss_pred hcCCCCCceeccCcCceEEEEEe-c-CCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCC------ccceeeeeeeccc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRL-K-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRH------LVSALGHCFECYF 547 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~-~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~n------iv~l~g~~~~~~~ 547 (659)
.++|...+.||+|+||.||+|+. . +|+.||||+++... ...+.+.+|+++++.++|++ |+++++++..
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~--- 88 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH--- 88 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE---
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc---
Confidence 35788889999999999999986 3 58999999996432 23467889999999887654 9999999876
Q ss_pred cCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecC------
Q 006145 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ------ 621 (659)
Q Consensus 548 ~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~------ 621 (659)
.+..++||||+ +|+|.+++... ....+++..+..++.|+++||+|||+. +|+||||||+||+++.
T Consensus 89 ----~~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 159 (339)
T 1z57_A 89 ----HGHICIVFELL-GLSTYDFIKEN-GFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEA 159 (339)
T ss_dssp ----TTEEEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEE
T ss_pred ----CCcEEEEEcCC-CCCHHHHHHhc-CCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccc
Confidence 46789999999 88999999753 234689999999999999999999998 9999999999999987
Q ss_pred -------------CcceEEccCccccccccccccceecccccccCCCCC
Q 006145 622 -------------NLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 622 -------------~~~~kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
++.+||+|||+++.... ......||+.|+|||+.
T Consensus 160 ~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~ 206 (339)
T 1z57_A 160 YNPKIKRDERTLINPDIKVVDFGSATYDDE--HHSTLVSTRHYRAPEVI 206 (339)
T ss_dssp EC----CEEEEESCCCEEECCCSSCEETTS--CCCSSCSCGGGCCHHHH
T ss_pred cCCccccccccccCCCceEeeCcccccCcc--ccccccCCccccChHHh
Confidence 66899999999976543 23456899999999975
No 313
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=4.4e-24 Score=219.26 Aligned_cols=202 Identities=26% Similarity=0.254 Sum_probs=104.7
Q ss_pred ccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCC
Q 006145 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILA 182 (659)
Q Consensus 103 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 182 (659)
+.++++|+.+++++++++. +|..+. ++|+.|+|++|.+++..|..|.++++|++|+|++|.+++. |.. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTCC
T ss_pred ccccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcCC
Confidence 4556666666666666653 333332 4566666666666655555566666666666666665532 221 4555555
Q ss_pred EEEccCCcCCccCCcccCCCCCCcEEeccccccccCCCC-CCCCCcCCEEEcccCCCCCCCCCCCcccceEecCCCcCCc
Q 006145 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRS 261 (659)
Q Consensus 183 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~ 261 (659)
+|+|++|+++ .+|..+..+++|++|+|++|++++.++. |.++++|++|+|++|++ ++
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l---------------------~~ 138 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNEL---------------------KT 138 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCC---------------------CC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCC---------------------Cc
Confidence 5555555555 4455555555555555555555544433 44444444444444333 22
Q ss_pred cCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCc
Q 006145 262 AIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT 332 (659)
Q Consensus 262 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~ 332 (659)
..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+++ .+|..+...+.|+.+++++|.+.
T Consensus 139 ~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 139 LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred cChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 23333445555555555555555444444455555555555555555 33444444444555555554443
No 314
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.92 E-value=8.1e-26 Score=245.78 Aligned_cols=165 Identities=18% Similarity=0.202 Sum_probs=126.7
Q ss_pred CCCCceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCC-CCCCccceeeeeeeccccCCCCceeEE
Q 006145 479 FDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVSRIFL 557 (659)
Q Consensus 479 ~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~~~~~~l 557 (659)
|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +|||||++++++.+ .+..++
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~-------~~~~~l 86 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETT-------DRFLYI 86 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEEC-------SSEEEE
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEec-------CCeEEE
Confidence 3445789999999998776667999999998653 245688999999876 89999999998875 567899
Q ss_pred EEeccCCCChhhhhcCCCCCC----CCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCC-----------
Q 006145 558 IFEYVPNGTLRSWISEGHAHQ----SLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN----------- 622 (659)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~----------- 622 (659)
||||+. |+|.+++....... ..++..+..++.||+.||+|||+. +|+||||||+|||++.+
T Consensus 87 v~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~ 162 (434)
T 2rio_A 87 ALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGA 162 (434)
T ss_dssp EECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCC
T ss_pred EEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCC
Confidence 999995 69999998532111 113345678999999999999998 99999999999999754
Q ss_pred --cceEEccCccccccccccc-----cceecccccccCCCCC
Q 006145 623 --LVAKISSYNLPLLAENAEK-----VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 623 --~~~kl~DFGla~~~~~~~~-----~~~~~gt~~y~aPE~~ 657 (659)
+.+||+|||+++....... ....+||+.|||||++
T Consensus 163 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 204 (434)
T 2rio_A 163 ENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELL 204 (434)
T ss_dssp CSCEEEECCCTTCEECCC--------------CCTTSCHHHH
T ss_pred CceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHh
Confidence 4899999999987654321 2356899999999975
No 315
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.92 E-value=1e-25 Score=241.75 Aligned_cols=172 Identities=20% Similarity=0.248 Sum_probs=140.2
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCCC--------CCCccceeeeeeecc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLR--------HRHLVSALGHCFECY 546 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~--------H~niv~l~g~~~~~~ 546 (659)
.++|...+.||+|+||+||+|+.. +++.||||+++... ...+.+.+|++++++++ |+||+++++++....
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 367888999999999999999864 58999999997432 23467899999999985 788999999987421
Q ss_pred ccCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCc---
Q 006145 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL--- 623 (659)
Q Consensus 547 ~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~--- 623 (659)
. .....++||||+ +|++.+++... ....+++..+..++.|+++||+|||+.+ +|+||||||+|||++.++
T Consensus 115 ~---~~~~~~lv~e~~-~~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~ 187 (397)
T 1wak_A 115 V---NGTHICMVFEVL-GHHLLKWIIKS-NYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYI 187 (397)
T ss_dssp T---TEEEEEEEECCC-CCBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHH
T ss_pred C---CCceEEEEEecc-CccHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhh
Confidence 1 145789999999 56777766542 2246999999999999999999999853 899999999999999775
Q ss_pred ----------------------------------------------ceEEccCccccccccccccceecccccccCCCCC
Q 006145 624 ----------------------------------------------VAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 624 ----------------------------------------------~~kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
.+||+|||+++..... ....+||+.|||||+.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~--~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC--SCSCCSCGGGCCHHHH
T ss_pred hhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc--CccCCCCCcccCChhh
Confidence 7999999999876432 3456899999999964
No 316
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=5.9e-24 Score=218.29 Aligned_cols=205 Identities=24% Similarity=0.189 Sum_probs=170.9
Q ss_pred ccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCC
Q 006145 126 KISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENL 205 (659)
Q Consensus 126 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 205 (659)
.+.++++|+.+++++|.++ .+|..+. ++|+.|+|++|.+++..|..|..+++|++|+|++|.+++..+ .+.+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcC
Confidence 3677889999999999998 5666554 688999999999988888889999999999999999986543 2788999
Q ss_pred cEEeccccccccCCCCCCCCCcCCEEEcccCCCCCCCCCCCcccceEecCCCcCCccCchhccCCccccEEeccCccccc
Q 006145 206 RVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVG 285 (659)
Q Consensus 206 ~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 285 (659)
+.|+|++|+++..+..+..+++|++|+|++|+++ +..|..|..+++|+.|+|++|+|++
T Consensus 80 ~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~---------------------~l~~~~~~~l~~L~~L~L~~N~l~~ 138 (290)
T 1p9a_G 80 GTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLT---------------------SLPLGALRGLGELQELYLKGNELKT 138 (290)
T ss_dssp CEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCC---------------------CCCSSTTTTCTTCCEEECTTSCCCC
T ss_pred CEEECCCCcCCcCchhhccCCCCCEEECCCCcCc---------------------ccCHHHHcCCCCCCEEECCCCCCCc
Confidence 9999999999866555788888888877776654 4445668888899999999999998
Q ss_pred CCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCccccC
Q 006145 286 PFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (659)
Q Consensus 286 ~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~~ 357 (659)
..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|+++ .+|..+....+++.+++.+|.+.+
T Consensus 139 ~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 139 LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred cChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 77778888999999999999999777777788999999999999998 788888888889999999998764
No 317
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=1e-24 Score=226.29 Aligned_cols=222 Identities=20% Similarity=0.188 Sum_probs=144.5
Q ss_pred CCCCCEEEecCCCCcCCCCc---ccCCCCCCcEEEcccCcCcccCChhc--cCCCCCcEEEeecCCCCCCCc----cccC
Q 006145 106 LPDLKVLRLVSLGLWGPLSG---KISRLSSLEILNMSSNFLNGAIPQEL--SILTSLQTLILDENMLAGRVP----DWLG 176 (659)
Q Consensus 106 l~~L~~L~L~~n~l~~~~p~---~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~l~ 176 (659)
-..++.|.+..+.++...-. .+..+++|++|+|++|.+++..|..+ .++++|++|+|++|.+++..| ..+.
T Consensus 63 ~~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~ 142 (310)
T 4glp_A 63 ALRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW 142 (310)
T ss_dssp SCCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT
T ss_pred hcceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh
Confidence 34578888888776532111 12345679999999999998888887 889999999999999987665 3456
Q ss_pred CCCCCCEEEccCCcCCccCCcccCCCCCCcEEeccccccccC---CCC--CCCCCcCCEEEcccCCCCCCCC------CC
Q 006145 177 SLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGE---VPD--FSGLTYLQVLDLENNALGPQFP------KV 245 (659)
Q Consensus 177 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~--~~~l~~L~~L~L~~N~l~~~~~------~~ 245 (659)
.+++|++|+|++|.+++..|..|+.+++|++|+|++|++.+. .+. +..+++|++|+|++|.++...+ ..
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~ 222 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAA 222 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHH
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhc
Confidence 788999999999999888888888999999999999987652 222 4677888888888887753211 01
Q ss_pred CcccceEecCCCcCCccCchhccCC---ccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCC
Q 006145 246 GKKLVTMILSKNKFRSAIPAEVSSY---YQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELG 322 (659)
Q Consensus 246 ~~~L~~L~l~~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~ 322 (659)
+++|++|+|++|++++.+|..+..+ ++|++|+|++|+|+ .+|..+. ++|+.|+|++|++++. |. +..+++|+
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 2455555555555555545444444 35555555555555 3444432 4555555555555542 11 33445555
Q ss_pred EEECcCCCCc
Q 006145 323 FVDLSSNLLT 332 (659)
Q Consensus 323 ~L~ls~N~l~ 332 (659)
.|++++|+++
T Consensus 298 ~L~L~~N~l~ 307 (310)
T 4glp_A 298 NLTLDGNPFL 307 (310)
T ss_dssp CEECSSTTTS
T ss_pred EEECcCCCCC
Confidence 5555555544
No 318
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=3.9e-24 Score=217.60 Aligned_cols=205 Identities=26% Similarity=0.266 Sum_probs=172.3
Q ss_pred CCEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccC
Q 006145 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (659)
Q Consensus 74 ~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (659)
.+++.|++.++.+... +.+..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++..|..|.+
T Consensus 41 ~~L~~L~l~~~~i~~~-----------~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~ 107 (272)
T 3rfs_A 41 NSIDQIIANNSDIKSV-----------QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDK 107 (272)
T ss_dssp TTCCEEECTTSCCCCC-----------TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTT
T ss_pred cceeeeeeCCCCcccc-----------cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcC
Confidence 4688999998875521 2477899999999999999874 47999999999999999999888888999
Q ss_pred CCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEeccccccccCCCC-CCCCCcCCEEE
Q 006145 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLD 232 (659)
Q Consensus 154 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ 232 (659)
+++|++|+|++|++++..|..|+.+++|++|+|++|.+++..|..|+.+++|+.|++++|++++.++. +..+++|++|+
T Consensus 108 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 187 (272)
T 3rfs_A 108 LTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLR 187 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEE
Confidence 99999999999999988888899999999999999999988888889999999999999999987776 68888888888
Q ss_pred cccCCCCCCCCCCCcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCC
Q 006145 233 LENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLF 312 (659)
Q Consensus 233 L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 312 (659)
|++|.++ +..|..+..+++|+.|+|++|.+.+. +++|+.|+++.|+++|.+|
T Consensus 188 L~~N~l~---------------------~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip 239 (272)
T 3rfs_A 188 LYQNQLK---------------------SVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVR 239 (272)
T ss_dssp CCSSCCS---------------------CCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBB
T ss_pred CCCCcCC---------------------ccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCccc
Confidence 8877765 44445566777788888888877643 4567778888888888888
Q ss_pred cCCCCCC
Q 006145 313 DDLSCNP 319 (659)
Q Consensus 313 ~~~~~~~ 319 (659)
..++.++
T Consensus 240 ~~~~~~~ 246 (272)
T 3rfs_A 240 NSAGSVA 246 (272)
T ss_dssp CTTSCBC
T ss_pred CcccccC
Confidence 7776544
No 319
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.91 E-value=2.9e-25 Score=230.77 Aligned_cols=169 Identities=15% Similarity=0.280 Sum_probs=123.7
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCc-h-HHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS-T-RNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~-~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
.++|...+.||+|+||.||+|+.. +|+.||||++....... . +.+.++..+++.++||||+++++++.+ .
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~-------~ 96 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFIT-------N 96 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-------S
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEec-------C
Confidence 456778899999999999999975 69999999997654322 2 234455567888999999999999976 4
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcC-CCCCCccccCCCCCceeecCCcceEEccCc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT-GIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiHrDlk~~NILld~~~~~kl~DFG 631 (659)
+..++||||+ ++.+..+.... ...+++..+..++.|+++||+|||+ . +|+||||||+||+++.++.+||+|||
T Consensus 97 ~~~~lv~e~~-~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg 170 (318)
T 2dyl_A 97 TDVFIAMELM-GTCAEKLKKRM--QGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFG 170 (318)
T ss_dssp SEEEEEECCC-SEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCT
T ss_pred CcEEEEEecc-CCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECC
Confidence 6789999999 44555554421 2468999999999999999999998 5 89999999999999999999999999
Q ss_pred cccccccccccceecccccccCCCCC
Q 006145 632 LPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 632 la~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
+++............||+.|+|||+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~ 196 (318)
T 2dyl_A 171 ISGRLVDDKAKDRSAGCAAYMAPERI 196 (318)
T ss_dssp TC--------------CCTTCCHHHH
T ss_pred CchhccCCccccccCCCccccChhhc
Confidence 99776555555567899999999975
No 320
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.91 E-value=3.8e-25 Score=236.51 Aligned_cols=169 Identities=19% Similarity=0.258 Sum_probs=139.5
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCCC-CC-----Cccceeeeeeecccc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HR-----HLVSALGHCFECYFD 548 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~-H~-----niv~l~g~~~~~~~~ 548 (659)
.++|...+.||+|+||+||+|+.. +++.||||+++... ...+++.+|+++++.++ |+ +|+++++++..
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~---- 127 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF---- 127 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE----
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc----
Confidence 567888999999999999999965 58899999997432 22456788998888885 55 49999999876
Q ss_pred CCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeec--CCcceE
Q 006145 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD--QNLVAK 626 (659)
Q Consensus 549 ~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld--~~~~~k 626 (659)
.+..++||||++ |+|.+++.... ...+++..+..++.|++.||+|||++ ..+|+||||||+|||++ .++.+|
T Consensus 128 ---~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~k 201 (382)
T 2vx3_A 128 ---RNHLCLVFEMLS-YNLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIK 201 (382)
T ss_dssp ---TTEEEEEEECCC-CBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEE
T ss_pred ---CCceEEEEecCC-CCHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEE
Confidence 467899999996 59999998532 24589999999999999999999952 23899999999999995 578899
Q ss_pred EccCccccccccccccceecccccccCCCCC
Q 006145 627 ISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 627 l~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
|+|||+++.... .....+||+.|+|||+.
T Consensus 202 L~DFG~a~~~~~--~~~~~~~t~~y~aPE~~ 230 (382)
T 2vx3_A 202 IVDFGSSCQLGQ--RIYQYIQSRFYRSPEVL 230 (382)
T ss_dssp ECCCTTCEETTC--CCCSSCSCGGGCCHHHH
T ss_pred EEeccCceeccc--ccccccCCccccChHHH
Confidence 999999987643 23457899999999975
No 321
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.91 E-value=1.7e-23 Score=235.94 Aligned_cols=208 Identities=27% Similarity=0.263 Sum_probs=148.7
Q ss_pred CCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEE
Q 006145 106 LPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLS 185 (659)
Q Consensus 106 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 185 (659)
+++|++|+|++|.+++. |. .+++|+.|++++|++++ +|.. +++|++|+|++|++++ +|. .+++|+.|+
T Consensus 100 l~~L~~L~Ls~N~l~~l-~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~ 167 (622)
T 3g06_A 100 PPGLLELSIFSNPLTHL-PA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLW 167 (622)
T ss_dssp CTTCCEEEECSCCCCCC-CC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEE
T ss_pred CCCCCEEECcCCcCCCC-CC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEE
Confidence 34444555555444432 21 34445555555555542 3322 2555555555555553 332 234555555
Q ss_pred ccCCcCCccCCcccCCCCCCcEEeccccccccCCCCCCCCCcCCEEEcccCCCCCCCCCCCcccceEecCCCcCCccCch
Q 006145 186 LRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPA 265 (659)
Q Consensus 186 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~ 265 (659)
+++|.+++ +| ..+++|+.|++++|++++.++ .+++|+.|++++|.++. +|...++|+.|++++|+|++ +|
T Consensus 168 L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~l~~---~~~~L~~L~L~~N~l~~-l~~~~~~L~~L~Ls~N~L~~-lp- 237 (622)
T 3g06_A 168 AYNNQLTS-LP---MLPSGLQELSVSDNQLASLPT---LPSELYKLWAYNNRLTS-LPALPSGLKELIVSGNRLTS-LP- 237 (622)
T ss_dssp CCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCSS-CCCCCTTCCEEECCSSCCSC-CC-
T ss_pred CCCCCCCC-Cc---ccCCCCcEEECCCCCCCCCCC---ccchhhEEECcCCcccc-cCCCCCCCCEEEccCCccCc-CC-
Confidence 55555553 34 345889999999999987443 24789999999999985 55567899999999999987 56
Q ss_pred hccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCC
Q 006145 266 EVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAG 342 (659)
Q Consensus 266 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~ 342 (659)
..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|++++.+|..+..+
T Consensus 238 --~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 238 --VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 307 (622)
T ss_dssp --CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHH
T ss_pred --CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhc
Confidence 56789999999999999 4665 6789999999999999 778889999999999999999999999877654
No 322
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.91 E-value=6.2e-25 Score=231.77 Aligned_cols=167 Identities=14% Similarity=0.237 Sum_probs=138.8
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CC-cEEEEEEecccCCCchHHHHHHHHHHhCCCCCC------ccceeeeeeeccc
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NG-TFVAIRCLKMKKCHSTRNFMHHIELISKLRHRH------LVSALGHCFECYF 547 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g-~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~n------iv~l~g~~~~~~~ 547 (659)
.++|...+.||+|+||+||+|+.. ++ +.||||+++... ...+.+.+|++++++++|++ ++.+.+++..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~--- 93 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF--- 93 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE---
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee---
Confidence 467888999999999999999965 34 789999997432 23457889999999997766 8999888876
Q ss_pred cCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceee--------
Q 006145 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL-------- 619 (659)
Q Consensus 548 ~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl-------- 619 (659)
.+..++||||+ +|++.+++... ....+++..+..++.|+++||+|||+. +|+||||||+|||+
T Consensus 94 ----~~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~ 164 (355)
T 2eu9_A 94 ----HGHMCIAFELL-GKNTFEFLKEN-NFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETL 164 (355)
T ss_dssp ----TTEEEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEE
T ss_pred ----CCeEEEEEecc-CCChHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccc
Confidence 46789999999 66787777642 224699999999999999999999998 99999999999999
Q ss_pred -----------cCCcceEEccCccccccccccccceecccccccCCCCC
Q 006145 620 -----------DQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 620 -----------d~~~~~kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
+.++.+||+|||+++.... ......||+.|+|||+.
T Consensus 165 ~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~ 211 (355)
T 2eu9_A 165 YNEHKSCEEKSVKNTSIRVADFGSATFDHE--HHTTIVATRHYRPPEVI 211 (355)
T ss_dssp ECCC-CCCEEEESCCCEEECCCTTCEETTS--CCCSSCSCGGGCCHHHH
T ss_pred ccccccccccccCCCcEEEeecCccccccc--cccCCcCCCcccCCeee
Confidence 6678999999999976543 23456899999999975
No 323
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=3e-25 Score=247.10 Aligned_cols=154 Identities=12% Similarity=0.155 Sum_probs=120.8
Q ss_pred CCCceeccCcCceEEEEEecCCcEEEEEEecccCCCc--------hHHHHHHHHHHhCCCCCCccceeeeeeeccccCCC
Q 006145 480 DTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHS--------TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 480 ~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~--------~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 551 (659)
...+.||+|+||+||+|+. .++.+|+|+........ .++|.+|++++++++||||+++..++..
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~------- 410 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD------- 410 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE-------
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe-------
Confidence 3467899999999999954 47889999875432211 2458999999999999999977666664
Q ss_pred CceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCc
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 631 (659)
.+..|+||||+++|+|.++++. +..++.|+++||+|||+. +|+||||||+|||+++ .+||+|||
T Consensus 411 ~~~~~lVmE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFG 474 (540)
T 3en9_A 411 LDNKRIMMSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFG 474 (540)
T ss_dssp TTTTEEEEECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCT
T ss_pred CCccEEEEECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECc
Confidence 3456999999999999999874 468999999999999998 9999999999999998 99999999
Q ss_pred cccccccccc--------cceecccccccCCCCC
Q 006145 632 LPLLAENAEK--------VGHVIPYSGSIDPTNS 657 (659)
Q Consensus 632 la~~~~~~~~--------~~~~~gt~~y~aPE~~ 657 (659)
+++....... ....+||+.|||||+.
T Consensus 475 la~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~ 508 (540)
T 3en9_A 475 LGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIW 508 (540)
T ss_dssp TCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHH
T ss_pred cCEECCCccccccchhhhhhhhcCCCCcCCHHHH
Confidence 9987755332 2367899999999974
No 324
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=1.4e-23 Score=209.06 Aligned_cols=195 Identities=18% Similarity=0.209 Sum_probs=137.7
Q ss_pred CCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCc-CcccCChhccCCCCCcEEEeec-CCCCCCCccccCCCCCCCEEE
Q 006145 108 DLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNF-LNGAIPQELSILTSLQTLILDE-NMLAGRVPDWLGSLPILAVLS 185 (659)
Q Consensus 108 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~l~~l~~L~~L~ 185 (659)
+|++|+|++|++++..+..|.++++|++|++++|. +++..+..|.++++|++|+|++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 78889999998888888788888899999999886 7766666788888888888888 888876667888888888888
Q ss_pred ccCCcCCccCCcccCCCCCCc---EEecccc-ccccCCCC-CCCCCcCC-EEEcccCCCCCCCCCCCcccceEecCCCcC
Q 006145 186 LRNNMFNGTLPDSFSYLENLR---VLALSNN-HFYGEVPD-FSGLTYLQ-VLDLENNALGPQFPKVGKKLVTMILSKNKF 259 (659)
Q Consensus 186 L~~N~l~~~~p~~~~~l~~L~---~L~Ls~N-~l~~~~p~-~~~l~~L~-~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l 259 (659)
+++|.+++ +|. |..+++|+ +|++++| ++++.++. |.++++|+ +|++++|.++.
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~------------------- 170 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTS------------------- 170 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCE-------------------
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcc-------------------
Confidence 88888885 665 77777777 8888888 77766654 77777777 77777666542
Q ss_pred CccCchhccCCccccEEeccCcc-cccCCchhhcCC-CcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCC
Q 006145 260 RSAIPAEVSSYYQLQRLDLSSNR-FVGPFPQALLSL-PSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSN 329 (659)
Q Consensus 260 ~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~l-~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N 329 (659)
+|......++|+.|+|++|+ +++..+..|..+ ++|+.|++++|++++. |.. .+++|+.|+++++
T Consensus 171 ---i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 171 ---VQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNT 236 (239)
T ss_dssp ---ECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC
T ss_pred ---cCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCceeeccCc
Confidence 22222122556666666663 654445555666 6666666666666533 222 3455666666554
No 325
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.90 E-value=7.9e-25 Score=232.91 Aligned_cols=172 Identities=16% Similarity=0.234 Sum_probs=140.9
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHHhCCC-----------CCCccceeeeee
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-----------HRHLVSALGHCF 543 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~-----------H~niv~l~g~~~ 543 (659)
.++|...+.||+|+||+||+|+.. +++.||||++.... ...+.+.+|++++++++ |+||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 356888899999999999999964 69999999997432 23456889999999886 899999999997
Q ss_pred eccccCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeec---
Q 006145 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD--- 620 (659)
Q Consensus 544 ~~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld--- 620 (659)
.... .....++||||+ +|+|.+++.... ...+++..+..++.|++.||+|||+.+ +|+||||||+|||++
T Consensus 97 ~~~~---~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~ 169 (373)
T 1q8y_A 97 HKGP---NGVHVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVD 169 (373)
T ss_dssp EEET---TEEEEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEE
T ss_pred ccCC---CCceEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccC
Confidence 5321 123689999999 889999997532 245899999999999999999999842 899999999999994
Q ss_pred ---CCcceEEccCccccccccccccceecccccccCCCCC
Q 006145 621 ---QNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 621 ---~~~~~kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
..+.+||+|||+++..... .....||+.|+|||+.
T Consensus 170 ~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~t~~y~aPE~~ 207 (373)
T 1q8y_A 170 SPENLIQIKIADLGNACWYDEH--YTNSIQTREYRSPEVL 207 (373)
T ss_dssp TTTTEEEEEECCCTTCEETTBC--CCSCCSCGGGCCHHHH
T ss_pred CCcCcceEEEcccccccccCCC--CCCCCCCccccCcHHH
Confidence 4458999999999776432 3456899999999974
No 326
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=4e-24 Score=221.85 Aligned_cols=200 Identities=22% Similarity=0.203 Sum_probs=173.0
Q ss_pred CCCCCCEEEecCCCCcCCCCccc--CCCCCCcEEEcccCcCcccCC----hhccCCCCCcEEEeecCCCCCCCccccCCC
Q 006145 105 KLPDLKVLRLVSLGLWGPLSGKI--SRLSSLEILNMSSNFLNGAIP----QELSILTSLQTLILDENMLAGRVPDWLGSL 178 (659)
Q Consensus 105 ~l~~L~~L~L~~n~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 178 (659)
.+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..| ..+..+++|++|+|++|++.+..|..|+.+
T Consensus 89 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 89 AYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp HHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCC
T ss_pred ccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccC
Confidence 35679999999999999999998 999999999999999998766 445689999999999999998888999999
Q ss_pred CCCCEEEccCCcCCcc--C--CcccCCCCCCcEEeccccccccCCCC----CCCCCcCCEEEcccCCCCCCCCCC---C-
Q 006145 179 PILAVLSLRNNMFNGT--L--PDSFSYLENLRVLALSNNHFYGEVPD----FSGLTYLQVLDLENNALGPQFPKV---G- 246 (659)
Q Consensus 179 ~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~l~~L~~L~L~~N~l~~~~~~~---~- 246 (659)
++|++|+|++|++.+. + +..++.+++|++|+|++|+++...+. +..+++|++|+|++|.+++..|.. +
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 248 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCM 248 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCC
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhcc
Confidence 9999999999998753 2 23347899999999999999753331 568899999999999999986643 2
Q ss_pred --cccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCC
Q 006145 247 --KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG 309 (659)
Q Consensus 247 --~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 309 (659)
++|++|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.|+|++|+++.
T Consensus 249 ~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 249 WSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 69999999999998 5777764 7999999999999974 43 6788999999999999974
No 327
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=2e-23 Score=209.64 Aligned_cols=190 Identities=27% Similarity=0.272 Sum_probs=121.0
Q ss_pred CCCcCCCCCCCceEeCCCCEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEE
Q 006145 57 EFCNTEPTSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEIL 136 (659)
Q Consensus 57 ~~C~w~~~~~~gv~C~~~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 136 (659)
+||.|. |+.|.. ..+.++++++.+.. +|. .+. ++|+.|+|++|.+++..+..|.++++|++|
T Consensus 3 ~Cp~~~-----gC~C~~-~~~~l~~~~~~l~~-~p~---------~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L 64 (251)
T 3m19_A 3 TCETVT-----GCTCNE-GKKEVDCQGKSLDS-VPS---------GIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWL 64 (251)
T ss_dssp -CHHHH-----SSEEEG-GGTEEECTTCCCSS-CCS---------CCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCCC-----ceEcCC-CCeEEecCCCCccc-cCC---------CCC--CCCCEEEccCCCcCccCHhHhcCcccCCEE
Confidence 577775 688942 34567887776552 222 222 467777777777777777777777777777
Q ss_pred EcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEeccccccc
Q 006145 137 NMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFY 216 (659)
Q Consensus 137 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 216 (659)
+|++|.+++..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+++
T Consensus 65 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 144 (251)
T 3m19_A 65 NLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ 144 (251)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCC
Confidence 77777777666666777777777777777777666666677777777777777777555555666667777777666666
Q ss_pred cCCCC-CCCCCcCCEEEcccCCCCCCCCCCCcccceEecCCCcCCccCchhccCCccccEEeccCccccc
Q 006145 217 GEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVG 285 (659)
Q Consensus 217 ~~~p~-~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 285 (659)
+.++. |..+++|++|+|++|.++ +..+..+..+++|+.|+|++|.+++
T Consensus 145 ~~~~~~~~~l~~L~~L~L~~N~l~---------------------~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 145 SIPAGAFDKLTNLQTLSLSTNQLQ---------------------SVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCS---------------------CCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred ccCHHHcCcCcCCCEEECCCCcCC---------------------ccCHHHHhCCCCCCEEEeeCCceeC
Confidence 55553 555555555555555443 3333344555555555555555554
No 328
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.90 E-value=7.5e-24 Score=217.10 Aligned_cols=143 Identities=11% Similarity=0.069 Sum_probs=125.9
Q ss_pred cCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCCc---hHHHHHHHHHHhCCCCCCccceeeeeeeccccCCCC
Q 006145 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS---TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (659)
Q Consensus 477 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~---~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 552 (659)
++|...+.||+|+||.||+|+.. +|+.||||.+....... .++|.+|++++++++||||+++++++.+ .
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-------~ 103 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT-------R 103 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-------T
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE-------C
Confidence 56888899999999999999976 49999999997654332 2679999999999999999999999986 4
Q ss_pred ceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecCCcceEEccCcc
Q 006145 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 632 (659)
+..|+||||+++|+|.++++.. ....+..+|+.|+++||+|||+. +|+||||||+||++++++.+||+++|.
T Consensus 104 ~~~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~~ 175 (286)
T 3uqc_A 104 AGGLVVAEWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPAT 175 (286)
T ss_dssp TEEEEEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCCC
T ss_pred CcEEEEEEecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEeccc
Confidence 6789999999999999999641 35567899999999999999998 999999999999999999999998876
Q ss_pred cc
Q 006145 633 PL 634 (659)
Q Consensus 633 a~ 634 (659)
..
T Consensus 176 ~~ 177 (286)
T 3uqc_A 176 MP 177 (286)
T ss_dssp CT
T ss_pred cC
Confidence 53
No 329
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=8.8e-26 Score=241.78 Aligned_cols=236 Identities=22% Similarity=0.248 Sum_probs=148.5
Q ss_pred ccccCCCCCCEEEecCCCCcCCCC----cccCCCCCCcEEEcccC---cCcccCChhc-------cCCCCCcEEEeecCC
Q 006145 101 TTLVKLPDLKVLRLVSLGLWGPLS----GKISRLSSLEILNMSSN---FLNGAIPQEL-------SILTSLQTLILDENM 166 (659)
Q Consensus 101 ~~l~~l~~L~~L~L~~n~l~~~~p----~~~~~l~~L~~L~Ls~N---~l~~~~p~~~-------~~l~~L~~L~Ls~N~ 166 (659)
..+..+++|++|+|++|.+++..+ ..|..+++|++|+|++| ++++.+|..+ ..+++|++|+|++|.
T Consensus 26 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 105 (386)
T 2ca6_A 26 AVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNA 105 (386)
T ss_dssp HHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCC
T ss_pred HHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCc
Confidence 345556666666666666655422 23556666666666663 3344445443 455666666666666
Q ss_pred CCC----CCccccCCCCCCCEEEccCCcCCccCCcccC----CC---------CCCcEEeccccccc-cCCC----CCCC
Q 006145 167 LAG----RVPDWLGSLPILAVLSLRNNMFNGTLPDSFS----YL---------ENLRVLALSNNHFY-GEVP----DFSG 224 (659)
Q Consensus 167 l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~----~l---------~~L~~L~Ls~N~l~-~~~p----~~~~ 224 (659)
+.+ .+|..+..+++|++|+|++|.+++..+..+. .+ ++|++|+|++|+++ +.++ .+..
T Consensus 106 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~ 185 (386)
T 2ca6_A 106 FGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQS 185 (386)
T ss_dssp CCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHh
Confidence 654 3455555566666666666665433222222 22 45555555555554 2222 1333
Q ss_pred CCcCCEEEcccCCCCCCCCCCCcccceEecCCCcCC--c---cCchhccCCccccEEeccCcccc----cCCchhhcCCC
Q 006145 225 LTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFR--S---AIPAEVSSYYQLQRLDLSSNRFV----GPFPQALLSLP 295 (659)
Q Consensus 225 l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~l~~l~ 295 (659)
+++ |+.|++++|+++ | .+|..+..+++|+.|+|++|.++ +.+|..+..++
T Consensus 186 ~~~---------------------L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~ 244 (386)
T 2ca6_A 186 HRL---------------------LHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWP 244 (386)
T ss_dssp CTT---------------------CCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCT
T ss_pred CCC---------------------cCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCC
Confidence 444 455555555554 2 34446778888888888888886 56788888888
Q ss_pred cccEEeccCCcCCCc----CCcCC--CCCCCCCEEECcCCCCcc----cCChhh-hCCCCCCEEEcCCccccC
Q 006145 296 SITYLNIADNKLTGK----LFDDL--SCNPELGFVDLSSNLLTG----QLPNCL-LAGSKNRVVLYARNCLAA 357 (659)
Q Consensus 296 ~L~~L~l~~N~l~~~----~p~~~--~~~~~L~~L~ls~N~l~g----~ip~~~-~~~~~l~~l~~~~N~l~~ 357 (659)
+|+.|+|++|.+++. ++..+ +.+++|+.|+|++|.+++ .+|..+ ..+++++.+++++|.+++
T Consensus 245 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 245 NLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp TCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred CcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 888899988888865 45555 347889999999999887 588877 557889999999998874
No 330
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.90 E-value=4e-26 Score=250.06 Aligned_cols=277 Identities=21% Similarity=0.185 Sum_probs=179.9
Q ss_pred CEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCccc-----CCCCCCcEEEcccCcCccc---
Q 006145 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKI-----SRLSSLEILNMSSNFLNGA--- 146 (659)
Q Consensus 75 ~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~--- 146 (659)
+++.|+|++|.+... ....++..+.++++|++|+|++|.+++..+..+ ..+++|++|+|++|.+++.
T Consensus 86 ~L~~L~L~~n~i~~~-----~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~ 160 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGA-----GCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCE 160 (461)
T ss_dssp CCCEEECTTSCCBGG-----GHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH
T ss_pred ceeEEEccCCCCCHH-----HHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHH
Confidence 466666666654310 011234556677777777777777765433332 2245677777777777753
Q ss_pred -CChhccCCCCCcEEEeecCCCCCCCccccC-----CCCCCCEEEccCCcCCcc----CCcccCCCCCCcEEeccccccc
Q 006145 147 -IPQELSILTSLQTLILDENMLAGRVPDWLG-----SLPILAVLSLRNNMFNGT----LPDSFSYLENLRVLALSNNHFY 216 (659)
Q Consensus 147 -~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~-----~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 216 (659)
++..+..+++|++|+|++|.+....+..+. .+++|++|+|++|.+++. ++..+..+++|++|++++|.++
T Consensus 161 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~ 240 (461)
T 1z7x_W 161 PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLG 240 (461)
T ss_dssp HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCC
Confidence 355566677777777777777654443333 255777777777777753 4666667777888888877776
Q ss_pred cCC-----CC-CCCCCcCCEEEcccCCCCCC----CCCC---CcccceEecCCCcCCccCchhccC-----CccccEEec
Q 006145 217 GEV-----PD-FSGLTYLQVLDLENNALGPQ----FPKV---GKKLVTMILSKNKFRSAIPAEVSS-----YYQLQRLDL 278 (659)
Q Consensus 217 ~~~-----p~-~~~l~~L~~L~L~~N~l~~~----~~~~---~~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~L~L 278 (659)
... +. +..+++|++|++++|.++.. ++.. .++|++|++++|.+.+..+..+.. .++|+.|+|
T Consensus 241 ~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L 320 (461)
T 1z7x_W 241 DVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWV 320 (461)
T ss_dssp HHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEEC
T ss_pred hHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEc
Confidence 531 22 33567788888888877653 2322 467778888888776544433322 257888888
Q ss_pred cCcccccC----CchhhcCCCcccEEeccCCcCCCcCCcCCC-----CCCCCCEEECcCCCCcc----cCChhhhCCCCC
Q 006145 279 SSNRFVGP----FPQALLSLPSITYLNIADNKLTGKLFDDLS-----CNPELGFVDLSSNLLTG----QLPNCLLAGSKN 345 (659)
Q Consensus 279 s~N~l~~~----~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~L~~L~ls~N~l~g----~ip~~~~~~~~l 345 (659)
++|.+++. +|..+..+++|+.|++++|++++..+..+. ..++|+.|++++|.+++ .+|..+..++++
T Consensus 321 ~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L 400 (461)
T 1z7x_W 321 KSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSL 400 (461)
T ss_dssp TTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCC
T ss_pred CCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCc
Confidence 88877754 466667778888888888877765443332 15678888888888875 677777777888
Q ss_pred CEEEcCCcccc
Q 006145 346 RVVLYARNCLA 356 (659)
Q Consensus 346 ~~l~~~~N~l~ 356 (659)
+.+++++|.++
T Consensus 401 ~~L~l~~N~i~ 411 (461)
T 1z7x_W 401 RELDLSNNCLG 411 (461)
T ss_dssp CEEECCSSSCC
T ss_pred cEEECCCCCCC
Confidence 88888887765
No 331
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=5.5e-23 Score=204.84 Aligned_cols=197 Identities=17% Similarity=0.201 Sum_probs=166.4
Q ss_pred CCCcEEEcccCcCcccCChhccCCCCCcEEEeecCC-CCCCCccccCCCCCCCEEEccC-CcCCccCCcccCCCCCCcEE
Q 006145 131 SSLEILNMSSNFLNGAIPQELSILTSLQTLILDENM-LAGRVPDWLGSLPILAVLSLRN-NMFNGTLPDSFSYLENLRVL 208 (659)
Q Consensus 131 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L 208 (659)
++|++|+|++|++++..+..|.++++|++|+|++|. +++..+..|.++++|++|++++ |.+++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 389999999999998777789999999999999997 8876677899999999999998 99998777889999999999
Q ss_pred eccccccccCCCCCCCCCcCC---EEEcccC-CCCCCCCCCCcccceEecCCCcCCccCchhccCCcccc-EEeccCccc
Q 006145 209 ALSNNHFYGEVPDFSGLTYLQ---VLDLENN-ALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQ-RLDLSSNRF 283 (659)
Q Consensus 209 ~Ls~N~l~~~~p~~~~l~~L~---~L~L~~N-~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l 283 (659)
++++|++++ +|.|..+++|+ +|++++| .+ ++..+..|..+++|+ .|++++|++
T Consensus 111 ~l~~n~l~~-lp~~~~l~~L~~L~~L~l~~N~~l---------------------~~i~~~~~~~l~~L~~~L~l~~n~l 168 (239)
T 2xwt_C 111 GIFNTGLKM-FPDLTKVYSTDIFFILEITDNPYM---------------------TSIPVNAFQGLCNETLTLKLYNNGF 168 (239)
T ss_dssp EEEEECCCS-CCCCTTCCBCCSEEEEEEESCTTC---------------------CEECTTTTTTTBSSEEEEECCSCCC
T ss_pred eCCCCCCcc-ccccccccccccccEEECCCCcch---------------------hhcCcccccchhcceeEEEcCCCCC
Confidence 999999987 55588887777 7666666 44 455556788999999 999999999
Q ss_pred ccCCchhhcCCCcccEEeccCCc-CCCcCCcCCCCC-CCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCc
Q 006145 284 VGPFPQALLSLPSITYLNIADNK-LTGKLFDDLSCN-PELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARN 353 (659)
Q Consensus 284 ~~~~p~~l~~l~~L~~L~l~~N~-l~~~~p~~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N 353 (659)
+ .+|......++|+.|++++|+ +++..+..+..+ ++|+.||+++|+++ .+|.. .+.+++.+.+.++
T Consensus 169 ~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~-~l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 169 T-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSK--GLEHLKELIARNT 236 (239)
T ss_dssp C-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCC-CCCCT--TCTTCSEEECTTC
T ss_pred c-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccc-cCChh--HhccCceeeccCc
Confidence 9 555544444899999999995 998778889999 99999999999999 45554 5667888887765
No 332
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=9.9e-26 Score=236.39 Aligned_cols=230 Identities=19% Similarity=0.152 Sum_probs=162.7
Q ss_pred CCcCCCCCCCceEeCCCCEeEEEeCCCCCCCCCCCCCcCCcccccccCC--CCCCEEEecCCCCcCCCCcccCCCCCCcE
Q 006145 58 FCNTEPTSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKL--PDLKVLRLVSLGLWGPLSGKISRLSSLEI 135 (659)
Q Consensus 58 ~C~w~~~~~~gv~C~~~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 135 (659)
|..|. ++.|+...++.++++++.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++
T Consensus 36 c~~W~-----~~~~~~~~~~~l~l~~~~~~------------~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~ 97 (336)
T 2ast_B 36 CKRWY-----RLASDESLWQTLDLTGKNLH------------PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQH 97 (336)
T ss_dssp CHHHH-----HHHTCSTTSSEEECTTCBCC------------HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCE
T ss_pred HHHHH-----HHhcCchhheeeccccccCC------------HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCE
Confidence 44675 46666556888999887654 2244555 7899999999999888776 567999999
Q ss_pred EEcccCcCccc-CChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCC-cCCcc-CCcccCCCCCCcEEeccc
Q 006145 136 LNMSSNFLNGA-IPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNN-MFNGT-LPDSFSYLENLRVLALSN 212 (659)
Q Consensus 136 L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~Ls~ 212 (659)
|+|++|.+++. +|..+..+++|++|+|++|.+++..|..++.+++|++|+|++| .+++. +|..+.++++|++|++++
T Consensus 98 L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~ 177 (336)
T 2ast_B 98 MDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSW 177 (336)
T ss_dssp EECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCC
T ss_pred EEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCC
Confidence 99999999876 8888999999999999999998888889999999999999999 67763 677788899999999999
Q ss_pred c-ccccC-CCC-CCCCC-cCCEEEcccCC--CC-CCCCC---CCcccceEecCCCc-CCccCchhccCCccccEEeccCc
Q 006145 213 N-HFYGE-VPD-FSGLT-YLQVLDLENNA--LG-PQFPK---VGKKLVTMILSKNK-FRSAIPAEVSSYYQLQRLDLSSN 281 (659)
Q Consensus 213 N-~l~~~-~p~-~~~l~-~L~~L~L~~N~--l~-~~~~~---~~~~L~~L~l~~N~-l~~~~p~~~~~l~~L~~L~Ls~N 281 (659)
| .+++. ++. +..++ +|++|++++|. ++ +.++. .+++|+.|++++|. +++..+..+..+++|+.|++++|
T Consensus 178 ~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~ 257 (336)
T 2ast_B 178 CFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRC 257 (336)
T ss_dssp CTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTC
T ss_pred CCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCC
Confidence 9 88763 333 67788 88888888883 43 11221 13455555555555 44444445555555555555555
Q ss_pred c-cccCCchhhcCCCcccEEeccCC
Q 006145 282 R-FVGPFPQALLSLPSITYLNIADN 305 (659)
Q Consensus 282 ~-l~~~~p~~l~~l~~L~~L~l~~N 305 (659)
. +.......+.++++|+.|++++|
T Consensus 258 ~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 258 YDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp TTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCCHHHHHHHhcCCCCCEEeccCc
Confidence 3 11111113445555555555555
No 333
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=1.4e-22 Score=203.46 Aligned_cols=179 Identities=22% Similarity=0.227 Sum_probs=110.2
Q ss_pred CCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEecc
Q 006145 132 SLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALS 211 (659)
Q Consensus 132 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 211 (659)
..+.+++++|.++ .+|..+. ++|+.|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 3455566666555 4444433 456666666666665555556666666666666666665555556666666666666
Q ss_pred ccccccCCCC-CCCCCcCCEEEcccCCCCCCCCCCCcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchh
Q 006145 212 NNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQA 290 (659)
Q Consensus 212 ~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 290 (659)
+|++++.++. |..+++|++|+|++|.++ +..+..|..+++|+.|+|++|+|++..+..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~---------------------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 150 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLK---------------------SLPSGVFDRLTKLKELRLNTNQLQSIPAGA 150 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCC---------------------CCCTTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCC---------------------CcChhHhccCCcccEEECcCCcCCccCHHH
Confidence 6666655443 455555555555555443 333334556666777777777776655556
Q ss_pred hcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCccc
Q 006145 291 LLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQ 334 (659)
Q Consensus 291 l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ 334 (659)
|..+++|++|+|++|++++..+..+..+++|+.|++++|++++.
T Consensus 151 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 151 FDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 77777777777777777766666677777777777777777665
No 334
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.90 E-value=6.5e-24 Score=236.45 Aligned_cols=209 Identities=24% Similarity=0.339 Sum_probs=158.6
Q ss_pred CCCCCCCCCCC-----cCCCCCCCce-EeCCCCEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCC
Q 006145 49 LSSWNITTEFC-----NTEPTSSLTV-VCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGP 122 (659)
Q Consensus 49 l~~W~~~~~~C-----~w~~~~~~gv-~C~~~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~ 122 (659)
+.+|..+.++| .|. ++ .|...+++.|+|++|++.+ +|.. + +++|++|+|++|.++ .
T Consensus 33 l~~W~~~~~~~~~~~~~~~-----~l~~C~~~~L~~L~Ls~n~L~~-lp~~---------l--~~~L~~L~Ls~N~l~-~ 94 (571)
T 3cvr_A 33 WDKWEKQALPGENRNEAVS-----LLKECLINQFSELQLNRLNLSS-LPDN---------L--PPQITVLEITQNALI-S 94 (571)
T ss_dssp HHHHHTTCCTTCCHHHHHH-----HHHHHHHTTCSEEECCSSCCSC-CCSC---------C--CTTCSEEECCSSCCS-C
T ss_pred HHHHhccCCccccccchhh-----hccccccCCccEEEeCCCCCCc-cCHh---------H--cCCCCEEECcCCCCc-c
Confidence 45676667788 564 67 7876789999999998775 5542 2 267999999999998 5
Q ss_pred CCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCC
Q 006145 123 LSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYL 202 (659)
Q Consensus 123 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 202 (659)
+| ..+++|++|+|++|.|++ +|. +.+ +|++|+|++|+|++ +|. .+++|+.|+|++|.|++ +|. .+
T Consensus 95 ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l 159 (571)
T 3cvr_A 95 LP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LP 159 (571)
T ss_dssp CC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CC
T ss_pred cc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cC
Confidence 66 457899999999999987 777 665 89999999999987 666 68899999999999986 665 57
Q ss_pred CCCcEEeccccccccCCCCCCCCCcCCEEEcccCCCCCCCCCCCccc-------ceEecCCCcCCccCchhccCCccccE
Q 006145 203 ENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKL-------VTMILSKNKFRSAIPAEVSSYYQLQR 275 (659)
Q Consensus 203 ~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L-------~~L~l~~N~l~~~~p~~~~~l~~L~~ 275 (659)
++|+.|+|++|+|++. |.|. ++|+.|+|++|.|+..++ ...+| +.|+|++|+|+. +|..+..+++|+.
T Consensus 160 ~~L~~L~Ls~N~L~~l-p~l~--~~L~~L~Ls~N~L~~lp~-~~~~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~ 234 (571)
T 3cvr_A 160 TSLEVLSVRNNQLTFL-PELP--ESLEALDVSTNLLESLPA-VPVRNHHSEETEIFFRCRENRITH-IPENILSLDPTCT 234 (571)
T ss_dssp TTCCEEECCSSCCSCC-CCCC--TTCCEEECCSSCCSSCCC-CC--------CCEEEECCSSCCCC-CCGGGGGSCTTEE
T ss_pred CCcCEEECCCCCCCCc-chhh--CCCCEEECcCCCCCchhh-HHHhhhcccccceEEecCCCccee-cCHHHhcCCCCCE
Confidence 8899999999999884 4455 889999999988874433 44466 777777777764 6666666777777
Q ss_pred EeccCcccccCCchhhcCCC
Q 006145 276 LDLSSNRFVGPFPQALLSLP 295 (659)
Q Consensus 276 L~Ls~N~l~~~~p~~l~~l~ 295 (659)
|+|++|.|++.+|..+..+.
T Consensus 235 L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 235 IILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp EECCSSSCCHHHHHHHHHHH
T ss_pred EEeeCCcCCCcCHHHHHHhh
Confidence 77777777777777766554
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=6.5e-25 Score=232.92 Aligned_cols=246 Identities=22% Similarity=0.160 Sum_probs=154.7
Q ss_pred EEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCC----hhccCCC-CCcEEEeecCCCCCCCccccCCC-----CC
Q 006145 111 VLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIP----QELSILT-SLQTLILDENMLAGRVPDWLGSL-----PI 180 (659)
Q Consensus 111 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~l-----~~ 180 (659)
+++|+.|+++|.+|..+...++|++|||++|.+++..+ ..+.+++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35666677777666666666667777777777765555 5566666 67777777777766666555553 67
Q ss_pred CCEEEccCCcCCccCCcccC----CC-CCCcEEeccccccccCCCC-----CCC-CCcCCEEEcccCCCCCCCCCC----
Q 006145 181 LAVLSLRNNMFNGTLPDSFS----YL-ENLRVLALSNNHFYGEVPD-----FSG-LTYLQVLDLENNALGPQFPKV---- 245 (659)
Q Consensus 181 L~~L~L~~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~~p~-----~~~-l~~L~~L~L~~N~l~~~~~~~---- 245 (659)
|++|+|++|.+++..+..+. .+ ++|++|+|++|++++..+. +.. .++|++|+|++|.++...+..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 77777777777665555333 33 6777777777777655442 333 256777777777766432221
Q ss_pred ---C-cccceEecCCCcCCccCchhcc----CC-ccccEEeccCcccccC----CchhhcCC-CcccEEeccCCcCCCcC
Q 006145 246 ---G-KKLVTMILSKNKFRSAIPAEVS----SY-YQLQRLDLSSNRFVGP----FPQALLSL-PSITYLNIADNKLTGKL 311 (659)
Q Consensus 246 ---~-~~L~~L~l~~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~----~p~~l~~l-~~L~~L~l~~N~l~~~~ 311 (659)
. .+|++|+|++|++++..+..+. .+ ++|+.|||++|.|++. ++..+..+ ++|+.|+|++|.+++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 1 3677777777777766654433 33 4777777777777652 44455553 47777777777777644
Q ss_pred C----cCCCCCCCCCEEECcCCCCcccC-------ChhhhCCCCCCEEEcCCcccc
Q 006145 312 F----DDLSCNPELGFVDLSSNLLTGQL-------PNCLLAGSKNRVVLYARNCLA 356 (659)
Q Consensus 312 p----~~~~~~~~L~~L~ls~N~l~g~i-------p~~~~~~~~l~~l~~~~N~l~ 356 (659)
+ ..+..+++|+.|++++|.+++.. +..+..+++++.+++++|.+.
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~ 297 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIH 297 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCC
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCC
Confidence 3 33456677777777777744322 223445566777777777765
No 336
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=6.3e-25 Score=235.11 Aligned_cols=224 Identities=18% Similarity=0.220 Sum_probs=164.5
Q ss_pred CCCcccCCCCCCcEEEcccCcCcccCC----hhccCCCCCcEEEeecC---CCCCCCcccc-------CCCCCCCEEEcc
Q 006145 122 PLSGKISRLSSLEILNMSSNFLNGAIP----QELSILTSLQTLILDEN---MLAGRVPDWL-------GSLPILAVLSLR 187 (659)
Q Consensus 122 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N---~l~~~~p~~l-------~~l~~L~~L~L~ 187 (659)
.++..+..+++|+.|+|++|.+++..+ ..+..+++|++|+|++| ++.+.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 456677788889999999998886543 34668888888988885 4555666555 677888888888
Q ss_pred CCcCCc----cCCcccCCCCCCcEEeccccccccCCCC-----CCCCCcCCEEEcccCCCCCCCCCCCcccceEecCCCc
Q 006145 188 NNMFNG----TLPDSFSYLENLRVLALSNNHFYGEVPD-----FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNK 258 (659)
Q Consensus 188 ~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-----~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~ 258 (659)
+|.+++ .+|..+..+++|++|+|++|.++...+. +..+ ..|.+.+. .++|++|++++|+
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l--------~~~~~~~~----~~~L~~L~L~~n~ 170 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQEL--------AVNKKAKN----APPLRSIICGRNR 170 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHH--------HHHHHHHT----CCCCCEEECCSSC
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHH--------hhhhhccc----CCCCcEEECCCCC
Confidence 888876 4667777788888888888877543221 2222 00000000 0344444555555
Q ss_pred CC-ccCc---hhccCCccccEEeccCcccc--c---CCchhhcCCCcccEEeccCCcCC----CcCCcCCCCCCCCCEEE
Q 006145 259 FR-SAIP---AEVSSYYQLQRLDLSSNRFV--G---PFPQALLSLPSITYLNIADNKLT----GKLFDDLSCNPELGFVD 325 (659)
Q Consensus 259 l~-~~~p---~~~~~l~~L~~L~Ls~N~l~--~---~~p~~l~~l~~L~~L~l~~N~l~----~~~p~~~~~~~~L~~L~ 325 (659)
++ +.+| ..+..+++|+.|+|++|+++ | ..|..+..+++|+.|+|++|.++ +.+|..+..+++|+.|+
T Consensus 171 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~ 250 (386)
T 2ca6_A 171 LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELG 250 (386)
T ss_dssp CTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEE
T ss_pred CCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEE
Confidence 54 3344 46778899999999999998 3 45558899999999999999997 67788889999999999
Q ss_pred CcCCCCccc----CChhhhC--CCCCCEEEcCCccccC
Q 006145 326 LSSNLLTGQ----LPNCLLA--GSKNRVVLYARNCLAA 357 (659)
Q Consensus 326 ls~N~l~g~----ip~~~~~--~~~l~~l~~~~N~l~~ 357 (659)
|++|.+++. +|..+.. +++++.+++++|.++.
T Consensus 251 L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 251 LNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp CTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred CCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCH
Confidence 999999976 6777744 8999999999999875
No 337
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=7.8e-23 Score=211.85 Aligned_cols=193 Identities=25% Similarity=0.354 Sum_probs=109.2
Q ss_pred cCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCE
Q 006145 104 VKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAV 183 (659)
Q Consensus 104 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 183 (659)
.++++|+.|++++|.+.. +| .+..+++|++|+|++|.+++..+ +.++++|++|+|++|.+++ +| .+..+++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~ 111 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKT 111 (308)
T ss_dssp HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCE
T ss_pred HHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCE
Confidence 345566666666666544 23 35566666666666666654322 5666666666666666653 22 4556666666
Q ss_pred EEccCCcCCccCCcccCCCCCCcEEeccccccccCCCCCCCCCcCCEEEcccCCCCCCCCCCCcccceEecCCCcCCccC
Q 006145 184 LSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAI 263 (659)
Q Consensus 184 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~ 263 (659)
|+|++|.+++ +|. +..+++|+.|++++|++++..+ +..+++|++|+|++|.++ +.
T Consensus 112 L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~---------------------~~- 166 (308)
T 1h6u_A 112 LDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVS---------------------DL- 166 (308)
T ss_dssp EECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCC---------------------CC-
T ss_pred EECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCC---------------------CC-
Confidence 6666666654 222 5556666666666666554333 555555555555555443 32
Q ss_pred chhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCc
Q 006145 264 PAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT 332 (659)
Q Consensus 264 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~ 332 (659)
+. +..+++|+.|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|+++
T Consensus 167 ~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 167 TP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEE
T ss_pred hh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeee
Confidence 22 5556666666666666654332 5566666666666666665442 556666666666666665
No 338
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=2e-24 Score=229.23 Aligned_cols=252 Identities=18% Similarity=0.143 Sum_probs=198.9
Q ss_pred EEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCC----cccCCCC-CCcEEEcccCcCcccCChhccC
Q 006145 79 LHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLS----GKISRLS-SLEILNMSSNFLNGAIPQELSI 153 (659)
Q Consensus 79 L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~ 153 (659)
++++.+++++.+| ..+...++|++|+|++|.+++..+ ..|..++ +|++|+|++|.+++..+..+..
T Consensus 3 ~~ls~n~~~~~~~---------~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 73 (362)
T 3goz_A 3 YKLTLHPGSNPVE---------EFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQ 73 (362)
T ss_dssp EECCCCTTCCHHH---------HHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred cccccccchHHHH---------HHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHH
Confidence 4566666554433 344455669999999999988877 7788898 9999999999999888877777
Q ss_pred C-----CCCcEEEeecCCCCCCCccccC----CC-CCCCEEEccCCcCCccCCccc----CC-CCCCcEEeccccccccC
Q 006145 154 L-----TSLQTLILDENMLAGRVPDWLG----SL-PILAVLSLRNNMFNGTLPDSF----SY-LENLRVLALSNNHFYGE 218 (659)
Q Consensus 154 l-----~~L~~L~Ls~N~l~~~~p~~l~----~l-~~L~~L~L~~N~l~~~~p~~~----~~-l~~L~~L~Ls~N~l~~~ 218 (659)
+ ++|++|+|++|.+++..+..+. .+ ++|++|+|++|.+++..+..+ .. .++|++|+|++|.++..
T Consensus 74 ~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 153 (362)
T 3goz_A 74 ILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIK 153 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGS
T ss_pred HHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHH
Confidence 5 9999999999999987776544 44 899999999999987766554 34 36999999999999864
Q ss_pred CCC-----CCCCC-cCCEEEcccCCCCCCCCCC-------C-cccceEecCCCcCCcc----CchhccC-CccccEEecc
Q 006145 219 VPD-----FSGLT-YLQVLDLENNALGPQFPKV-------G-KKLVTMILSKNKFRSA----IPAEVSS-YYQLQRLDLS 279 (659)
Q Consensus 219 ~p~-----~~~l~-~L~~L~L~~N~l~~~~~~~-------~-~~L~~L~l~~N~l~~~----~p~~~~~-l~~L~~L~Ls 279 (659)
... +..++ +|++|+|++|.+++..+.. . ++|+.|+|++|.+++. ++..+.. .++|+.|+|+
T Consensus 154 ~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls 233 (362)
T 3goz_A 154 SSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLC 233 (362)
T ss_dssp CHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECC
T ss_pred HHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECc
Confidence 332 44554 9999999999998766531 2 5899999999999874 4555555 4599999999
Q ss_pred CcccccCCc----hhhcCCCcccEEeccCCcCCCcC-------CcCCCCCCCCCEEECcCCCCcccCChhh
Q 006145 280 SNRFVGPFP----QALLSLPSITYLNIADNKLTGKL-------FDDLSCNPELGFVDLSSNLLTGQLPNCL 339 (659)
Q Consensus 280 ~N~l~~~~p----~~l~~l~~L~~L~l~~N~l~~~~-------p~~~~~~~~L~~L~ls~N~l~g~ip~~~ 339 (659)
+|.+++..+ ..+..+++|+.|+|++|.+.+.. +..+..+++|+.||+++|++.+..|..+
T Consensus 234 ~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~~ 304 (362)
T 3goz_A 234 LNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPI 304 (362)
T ss_dssp SSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHHH
T ss_pred CCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHHH
Confidence 999987655 34577899999999999965443 3467788999999999999987755544
No 339
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.89 E-value=1.3e-22 Score=197.50 Aligned_cols=162 Identities=25% Similarity=0.215 Sum_probs=121.1
Q ss_pred CCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEc
Q 006145 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (659)
Q Consensus 107 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 186 (659)
++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 107 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELAL 107 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEc
Confidence 47888888888888777777888888888888888888666666788888888888888888666666788888888888
Q ss_pred cCCcCCccCCcccCCCCCCcEEeccccccccCCCC-CCCCCcCCEEEcccCCCCCCCCCCCcccceEecCCCcCCccCch
Q 006145 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPA 265 (659)
Q Consensus 187 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~ 265 (659)
++|++++..+..|.++++|+.|+|++|++++.++. +..+++|++|++++|.+.+
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~------------------------- 162 (208)
T 2o6s_A 108 NTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC------------------------- 162 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------------------------
T ss_pred CCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------------------------
Confidence 88888876666678888888888888888776665 6677777777777665432
Q ss_pred hccCCccccEEeccCcccccCCchhhcCCCc
Q 006145 266 EVSSYYQLQRLDLSSNRFVGPFPQALLSLPS 296 (659)
Q Consensus 266 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 296 (659)
.+++|+.|+++.|+++|.+|.+++.++.
T Consensus 163 ---~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 ---TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ---CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ---CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 2335566666666666666666555543
No 340
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.88 E-value=5.8e-23 Score=211.81 Aligned_cols=149 Identities=17% Similarity=0.290 Sum_probs=126.0
Q ss_pred cCCCCC-ceeccCcCceEEEEEec-CCcEEEEEEecccCCCchHHHHHHHHHH-hCCCCCCccceeeeeeeccccCCCCc
Q 006145 477 NNFDTS-AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELI-SKLRHRHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 477 ~~~~~~-~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~Ei~~l-~~l~H~niv~l~g~~~~~~~~~~~~~ 553 (659)
++|... +.||+|+||.||+|+.. +++.||||+++. ...+.+|++++ +..+||||+++++++..... ...
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~---~~~ 88 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYA---GRK 88 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEET---TEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcC---CCc
Confidence 445555 77999999999999964 699999999863 35678899888 66689999999999864211 135
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCccccCCCCCceeecC---CcceEEccC
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ---NLVAKISSY 630 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILld~---~~~~kl~DF 630 (659)
..++||||+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Df 164 (299)
T 3m2w_A 89 CLLIVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 164 (299)
T ss_dssp EEEEEECCCCSCBHHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred eEEEEEeecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecc
Confidence 689999999999999999863 234699999999999999999999998 9999999999999998 789999999
Q ss_pred ccccccc
Q 006145 631 NLPLLAE 637 (659)
Q Consensus 631 Gla~~~~ 637 (659)
|+++...
T Consensus 165 g~a~~~~ 171 (299)
T 3m2w_A 165 GFAKETT 171 (299)
T ss_dssp TTCEECT
T ss_pred ccccccc
Confidence 9997654
No 341
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.88 E-value=5.2e-24 Score=230.02 Aligned_cols=175 Identities=15% Similarity=0.187 Sum_probs=129.4
Q ss_pred hcCCCCCceeccCcCceEEEEEec-CCcEEEEEEecccCCC---chHHHHHHHHHHhCCCC-CCccceeee---------
Q 006145 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---STRNFMHHIELISKLRH-RHLVSALGH--------- 541 (659)
Q Consensus 476 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~~Ei~~l~~l~H-~niv~l~g~--------- 541 (659)
...|...+.||+|+||+||+|+.. +|+.||||++...... ..+.|.+|+.+++.++| +|......+
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 445667789999999999999954 6999999998743322 24679999999999987 332222111
Q ss_pred eeeccc-------cC---CCCceeEEEEeccCCCChhhhhcC----CCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCc
Q 006145 542 CFECYF-------DD---SSVSRIFLIFEYVPNGTLRSWISE----GHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGV 607 (659)
Q Consensus 542 ~~~~~~-------~~---~~~~~~~lV~Ey~~~GsL~~~l~~----~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i 607 (659)
+..... .. ......+++|+++ +|+|.++++. ......++|..+..++.|+++||+|||+. +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 110000 00 0012356777766 6799998841 11234588999999999999999999998 99
Q ss_pred cccCCCCCceeecCCcceEEccCccccccccccccceecccccccCCCCC
Q 006145 608 FSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (659)
Q Consensus 608 iHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~ 657 (659)
|||||||+|||++.++.+||+|||+++..... ....+| +.|||||+.
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~--~~~~~g-~~y~aPE~~ 279 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS--AVSPIG-RGFAPPETT 279 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE--ECCCCC-TTTCCHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc--cccCCC-CceeCchhh
Confidence 99999999999999999999999999766443 455678 999999975
No 342
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=1.3e-22 Score=210.07 Aligned_cols=191 Identities=24% Similarity=0.334 Sum_probs=153.4
Q ss_pred CCEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccC
Q 006145 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (659)
Q Consensus 74 ~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (659)
.+++.|+++++.+.. ++ .+..+++|++|+|++|.+++..+ +..+++|++|+|++|.+++ +| .+..
T Consensus 41 ~~L~~L~l~~~~i~~-l~----------~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~ 105 (308)
T 1h6u_A 41 DGITTLSAFGTGVTT-IE----------GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAG 105 (308)
T ss_dssp HTCCEEECTTSCCCC-CT----------TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTT
T ss_pred CCcCEEEeeCCCccC-ch----------hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcC
Confidence 579999999987653 12 46789999999999999987655 9999999999999999986 34 6999
Q ss_pred CCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEeccccccccCCCCCCCCCcCCEEEc
Q 006145 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDL 233 (659)
Q Consensus 154 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L 233 (659)
+++|++|+|++|++++ +|. +..+++|++|++++|.+++..+ +..+++|+.|+|++|++++..+ +..+++|+.|++
T Consensus 106 l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l 180 (308)
T 1h6u_A 106 LQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKA 180 (308)
T ss_dssp CTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEEC
T ss_pred CCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEEC
Confidence 9999999999999986 443 9999999999999999996544 8999999999999999997655 889999999999
Q ss_pred ccCCCCCCCCCCCcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCC
Q 006145 234 ENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG 309 (659)
Q Consensus 234 ~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 309 (659)
++|.+++..+ +..+++|+.|+|++|++++..| +..+++|+.|++++|++++
T Consensus 181 ~~n~l~~~~~-----------------------l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 181 DDNKISDISP-----------------------LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CSSCCCCCGG-----------------------GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred CCCccCcChh-----------------------hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 8888754322 4555666666666666664332 5666666666666666654
No 343
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.88 E-value=2e-25 Score=244.60 Aligned_cols=229 Identities=24% Similarity=0.212 Sum_probs=96.9
Q ss_pred cCCCCCCEEEecCCCCcC----CCCcccCCCCCCcEEEcccCcCcccCChhc-cCCC----CCcEEEeecCCCCC----C
Q 006145 104 VKLPDLKVLRLVSLGLWG----PLSGKISRLSSLEILNMSSNFLNGAIPQEL-SILT----SLQTLILDENMLAG----R 170 (659)
Q Consensus 104 ~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~----~L~~L~Ls~N~l~~----~ 170 (659)
..+++|++|+|++|.+++ .++..+..+++|++|+|++|.++...+..+ ..++ +|++|+|++|.++. .
T Consensus 25 ~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~ 104 (461)
T 1z7x_W 25 PLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGV 104 (461)
T ss_dssp HHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHH
T ss_pred hhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHH
Confidence 344455555555555442 233444444555555555555543322222 1233 35555555555442 3
Q ss_pred CccccCCCCCCCEEEccCCcCCccCCccc-----CCCCCCcEEeccccccccCC----C-CCCCCCcCCEEEcccCCCCC
Q 006145 171 VPDWLGSLPILAVLSLRNNMFNGTLPDSF-----SYLENLRVLALSNNHFYGEV----P-DFSGLTYLQVLDLENNALGP 240 (659)
Q Consensus 171 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~~----p-~~~~l~~L~~L~L~~N~l~~ 240 (659)
+|..+..+++|++|+|++|.+++..+..+ ...++|++|+|++|++++.. + .+..+++|++|++++|.++.
T Consensus 105 l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~ 184 (461)
T 1z7x_W 105 LSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINE 184 (461)
T ss_dssp HHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred HHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcch
Confidence 34445555555555555555443222211 12334555555555444321 1 13334445555555544432
Q ss_pred CCCCC--------CcccceEecCCCcCCcc----CchhccCCccccEEeccCcccccCC-----chhhcCCCcccEEecc
Q 006145 241 QFPKV--------GKKLVTMILSKNKFRSA----IPAEVSSYYQLQRLDLSSNRFVGPF-----PQALLSLPSITYLNIA 303 (659)
Q Consensus 241 ~~~~~--------~~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~-----p~~l~~l~~L~~L~l~ 303 (659)
..+.. .++|+.|++++|.+++. ++..+..+++|+.|++++|.+++.. +..+..+++|+.|+++
T Consensus 185 ~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~ 264 (461)
T 1z7x_W 185 AGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIW 264 (461)
T ss_dssp HHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECc
Confidence 21110 12444444444444432 2333444444444444444443221 1112234444444444
Q ss_pred CCcCCCc----CCcCCCCCCCCCEEECcCCCCc
Q 006145 304 DNKLTGK----LFDDLSCNPELGFVDLSSNLLT 332 (659)
Q Consensus 304 ~N~l~~~----~p~~~~~~~~L~~L~ls~N~l~ 332 (659)
+|++++. ++..+..+++|+.|++++|.++
T Consensus 265 ~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~ 297 (461)
T 1z7x_W 265 ECGITAKGCGDLCRVLRAKESLKELSLAGNELG 297 (461)
T ss_dssp TSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCH
T ss_pred CCCCCHHHHHHHHHHHhhCCCcceEECCCCCCc
Confidence 4444432 2333333444444444444444
No 344
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88 E-value=1.4e-23 Score=214.25 Aligned_cols=143 Identities=11% Similarity=0.108 Sum_probs=115.8
Q ss_pred HHHHHHhhcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCC------------------chHHHHHHHHHHhCC
Q 006145 469 LEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH------------------STRNFMHHIELISKL 530 (659)
Q Consensus 469 ~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~------------------~~~~~~~Ei~~l~~l 530 (659)
+..+......|...+.||+|+||.||+|+..+|+.||||.++..... ...++.+|+++++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 44555566667777999999999999999977999999999643211 234689999999999
Q ss_pred CCCCccceeeeeeeccccCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCcccc
Q 006145 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSN 610 (659)
Q Consensus 531 ~H~niv~l~g~~~~~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHr 610 (659)
+ | +++.+++.. +..++||||+++|+|.+ +.. .....++.|+++||+|||+. +|+||
T Consensus 162 ~--~-~~v~~~~~~--------~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~---giiHr 217 (282)
T 1zar_A 162 Q--G-LAVPKVYAW--------EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHR---GIVHG 217 (282)
T ss_dssp T--T-SSSCCEEEE--------ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred c--C-CCcCeEEec--------cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHC---CCEeC
Confidence 9 5 667665532 34699999999999999 532 12346999999999999998 99999
Q ss_pred CCCCCceeecCCcceEEccCcccccc
Q 006145 611 NLKITDILLDQNLVAKISSYNLPLLA 636 (659)
Q Consensus 611 Dlk~~NILld~~~~~kl~DFGla~~~ 636 (659)
||||+|||++ ++.+||+|||+|+..
T Consensus 218 Dlkp~NILl~-~~~vkl~DFG~a~~~ 242 (282)
T 1zar_A 218 DLSQYNVLVS-EEGIWIIDFPQSVEV 242 (282)
T ss_dssp CCSTTSEEEE-TTEEEECCCTTCEET
T ss_pred CCCHHHEEEE-CCcEEEEECCCCeEC
Confidence 9999999999 999999999999744
No 345
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.88 E-value=3e-22 Score=223.08 Aligned_cols=187 Identities=22% Similarity=0.357 Sum_probs=101.4
Q ss_pred CCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEcc
Q 006145 108 DLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR 187 (659)
Q Consensus 108 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 187 (659)
+|+.|+|++|++++ +|..+. ++|++|+|++|.|+ .+| ..+++|++|+|++|+|++ +|. +.. +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 55555555555554 443332 45555555555555 344 234555555555555554 444 333 45555555
Q ss_pred CCcCCccCCcccCCCCCCcEEeccccccccCCCCCCCCCcCCEEEcccCCCCCCCCCCCcccceEecCCCcCCccCchhc
Q 006145 188 NNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEV 267 (659)
Q Consensus 188 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~ 267 (659)
+|.|++ +|. .+++|+.|+|++|+|++ +|..+++|+.|+|++|+|++ +|. |
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~------------------------lp~~l~~L~~L~Ls~N~L~~-lp~-l 178 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM------------------------LPELPTSLEVLSVRNNQLTF-LPE-L 178 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC------------------------CCCCCTTCCEEECCSSCCSC-CCC-C
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc------------------------CCCcCCCcCEEECCCCCCCC-cch-h
Confidence 555554 333 34455555555555544 22233445555555555554 444 4
Q ss_pred cCCccccEEeccCcccccCCchhhcCCCcc-------cEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhh
Q 006145 268 SSYYQLQRLDLSSNRFVGPFPQALLSLPSI-------TYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLL 340 (659)
Q Consensus 268 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L-------~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~ 340 (659)
. ++|+.|+|++|+|+ .+|. +.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|++++.+|..+.
T Consensus 179 ~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~ 251 (571)
T 3cvr_A 179 P--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLS 251 (571)
T ss_dssp C--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHH
T ss_pred h--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHH
Confidence 3 56666666666666 4554 433 55 77777777777 4566666677777777777777777777665
Q ss_pred CC
Q 006145 341 AG 342 (659)
Q Consensus 341 ~~ 342 (659)
.+
T Consensus 252 ~l 253 (571)
T 3cvr_A 252 QQ 253 (571)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 346
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=8.2e-22 Score=208.01 Aligned_cols=218 Identities=21% Similarity=0.118 Sum_probs=141.1
Q ss_pred CCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCCh-hccCCCCCcE-EEeecCCCCCCCccccCCCCCCCEE
Q 006145 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQ-ELSILTSLQT-LILDENMLAGRVPDWLGSLPILAVL 184 (659)
Q Consensus 107 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~-L~Ls~N~l~~~~p~~l~~l~~L~~L 184 (659)
+++++|+|++|+|+...+++|.++++|++|+|++|++.+.+|. .|.++++|++ ++++.|+++...|+.|..+++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 4788999999999877777899999999999999998776664 5788888765 6667788887778888899999999
Q ss_pred EccCCcCCccCCcccCCCCCCcEEeccc-cccccCCCC-CCCCC-cCCEEEcccCCCCCCCCCC--CcccceEecCC-Cc
Q 006145 185 SLRNNMFNGTLPDSFSYLENLRVLALSN-NHFYGEVPD-FSGLT-YLQVLDLENNALGPQFPKV--GKKLVTMILSK-NK 258 (659)
Q Consensus 185 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~-~~~l~-~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~-N~ 258 (659)
++++|++++..+..+....++..|++.+ |++....+. |..+. .++.|+|++|+|+...+.. ..+|+.|++++ |.
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~ 189 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNN 189 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTT
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhhccCCc
Confidence 9999998877666777777788888865 455544443 55553 5677777777776544433 24555666654 33
Q ss_pred CCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcC
Q 006145 259 FRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSS 328 (659)
Q Consensus 259 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~ 328 (659)
++...+..|..+++|+.|||++|+|+...+..+. +|+.|.+.+++--..+| .+..+++|+.+++++
T Consensus 190 l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~---~L~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~ 255 (350)
T 4ay9_X 190 LEELPNDVFHGASGPVILDISRTRIHSLPSYGLE---NLKKLRARSTYNLKKLP-TLEKLVALMEASLTY 255 (350)
T ss_dssp CCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCT---TCCEEECTTCTTCCCCC-CTTTCCSCCEEECSC
T ss_pred ccCCCHHHhccCcccchhhcCCCCcCccChhhhc---cchHhhhccCCCcCcCC-CchhCcChhhCcCCC
Confidence 3332223455666666666666666533222232 33333333222222333 244455555555543
No 347
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=8.6e-24 Score=221.61 Aligned_cols=246 Identities=16% Similarity=0.135 Sum_probs=201.4
Q ss_pred CCCEEEecCCCCcCCCCcccCCC--CCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCC-CccccCCCCCCCEE
Q 006145 108 DLKVLRLVSLGLWGPLSGKISRL--SSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGR-VPDWLGSLPILAVL 184 (659)
Q Consensus 108 ~L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L 184 (659)
.++.|++++|.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4789999999886 5667777 8999999999999987766 66899999999999999876 88899999999999
Q ss_pred EccCCcCCccCCcccCCCCCCcEEecccc-ccccC-CCC-CCCCCcCCEEEcccC-CCCCC-CCC---CCc-ccceEecC
Q 006145 185 SLRNNMFNGTLPDSFSYLENLRVLALSNN-HFYGE-VPD-FSGLTYLQVLDLENN-ALGPQ-FPK---VGK-KLVTMILS 255 (659)
Q Consensus 185 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~-~~~l~~L~~L~L~~N-~l~~~-~~~---~~~-~L~~L~l~ 255 (659)
+|++|.+++..|..++.+++|++|+|++| .+++. ++. +.++++|++|++++| .+++. ++. .++ +|++|+++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 99999999889999999999999999999 67752 444 788999999999999 88753 333 256 99999999
Q ss_pred CC--cCC-ccCchhccCCccccEEeccCcc-cccCCchhhcCCCcccEEeccCCc-CCCcCCcCCCCCCCCCEEECcCCC
Q 006145 256 KN--KFR-SAIPAEVSSYYQLQRLDLSSNR-FVGPFPQALLSLPSITYLNIADNK-LTGKLFDDLSCNPELGFVDLSSNL 330 (659)
Q Consensus 256 ~N--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~l~~N~-l~~~~p~~~~~~~~L~~L~ls~N~ 330 (659)
+| .++ +.+|..+..+++|+.|++++|. +++..+..+..+++|+.|++++|. ++......+..+++|+.|++++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~- 282 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI- 282 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-
Confidence 99 566 5677888899999999999999 787888899999999999999995 33222235788999999999999
Q ss_pred CcccCChhhhCCCCCCEEEcCCccccCCCC
Q 006145 331 LTGQLPNCLLAGSKNRVVLYARNCLAAGNE 360 (659)
Q Consensus 331 l~g~ip~~~~~~~~l~~l~~~~N~l~~~~~ 360 (659)
++...-..+. ..+..+.++.|.+++..+
T Consensus 283 i~~~~~~~l~--~~l~~L~l~~n~l~~~~~ 310 (336)
T 2ast_B 283 VPDGTLQLLK--EALPHLQINCSHFTTIAR 310 (336)
T ss_dssp SCTTCHHHHH--HHSTTSEESCCCSCCTTC
T ss_pred cCHHHHHHHH--hhCcceEEecccCccccC
Confidence 4432212222 124556688999986543
No 348
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=4.6e-21 Score=186.62 Aligned_cols=161 Identities=27% Similarity=0.273 Sum_probs=106.8
Q ss_pred CCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEec
Q 006145 131 SSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLAL 210 (659)
Q Consensus 131 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 210 (659)
++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..|.++++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 107 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELAL 107 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEc
Confidence 47777888888777665666777777777777777777655556677777777777777777655555677777777777
Q ss_pred cccccccCCCC-CCCCCcCCEEEcccCCCCCCCCCCCcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCch
Q 006145 211 SNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQ 289 (659)
Q Consensus 211 s~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 289 (659)
++|++++.++. |..+++|++|+|++|.+ ++..+..+..+++|+.|++++|.+.+
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l---------------------~~~~~~~~~~l~~L~~L~l~~N~~~~---- 162 (208)
T 2o6s_A 108 NTNQLQSLPDGVFDKLTQLKDLRLYQNQL---------------------KSVPDGVFDRLTSLQYIWLHDNPWDC---- 162 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCC---------------------SCCCTTTTTTCTTCCEEECCSCCBCC----
T ss_pred CCCcCcccCHhHhccCCcCCEEECCCCcc---------------------ceeCHHHhccCCCccEEEecCCCeec----
Confidence 77777665554 55566666555555544 33333445666777777777776653
Q ss_pred hhcCCCcccEEeccCCcCCCcCCcCCCCCC
Q 006145 290 ALLSLPSITYLNIADNKLTGKLFDDLSCNP 319 (659)
Q Consensus 290 ~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~ 319 (659)
.+++|+.|+++.|+++|.+|+.++.++
T Consensus 163 ---~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 163 ---TCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp ---CTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred ---CCCCHHHHHHHHHhCCceeeccCcccc
Confidence 345666677777777777776665544
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=1.7e-20 Score=197.94 Aligned_cols=235 Identities=17% Similarity=0.084 Sum_probs=180.4
Q ss_pred EEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCc-cccCCCCCCCE-EEccCC
Q 006145 112 LRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVP-DWLGSLPILAV-LSLRNN 189 (659)
Q Consensus 112 L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~-L~L~~N 189 (659)
++-++++++ .+|..+ .++|+.|+|++|+|+...+..|.++++|++|+|++|++.+.+| ..|.++++|.. +.+++|
T Consensus 14 v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N 90 (350)
T 4ay9_X 14 FLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKAN 90 (350)
T ss_dssp EEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEET
T ss_pred EEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCC
Confidence 344455554 345444 3689999999999996656689999999999999999987776 47889999876 667789
Q ss_pred cCCccCCcccCCCCCCcEEeccccccccCCCC-CCCCCcCCEEEccc-CCCCCCCCCC----CcccceEecCCCcCCccC
Q 006145 190 MFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLEN-NALGPQFPKV----GKKLVTMILSKNKFRSAI 263 (659)
Q Consensus 190 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~-N~l~~~~~~~----~~~L~~L~l~~N~l~~~~ 263 (659)
+++...|..|.++++|++|++++|+++..++. +....++..|++.+ |.+....+.. ...++.|+|++|+|+. +
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~-i 169 (350)
T 4ay9_X 91 NLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-I 169 (350)
T ss_dssp TCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-E
T ss_pred cccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC-C
Confidence 99988899999999999999999999877664 66677888999976 5565444432 3568899999999986 4
Q ss_pred chhccCCccccEEeccC-cccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCC
Q 006145 264 PAEVSSYYQLQRLDLSS-NRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAG 342 (659)
Q Consensus 264 p~~~~~l~~L~~L~Ls~-N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~ 342 (659)
|.......+|+.|++++ |.++...+..|..+++|+.|+|++|+|+...+..+ .+|+.|.+.++.--..+|. +..+
T Consensus 170 ~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~---~~L~~L~~l~~~~l~~lP~-l~~l 245 (350)
T 4ay9_X 170 HNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGL---ENLKKLRARSTYNLKKLPT-LEKL 245 (350)
T ss_dssp CTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSC---TTCCEEECTTCTTCCCCCC-TTTC
T ss_pred ChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhh---ccchHhhhccCCCcCcCCC-chhC
Confidence 55555667899999986 56654444578999999999999999996555444 5566666655544447774 6778
Q ss_pred CCCCEEEcCCcc
Q 006145 343 SKNRVVLYARNC 354 (659)
Q Consensus 343 ~~l~~l~~~~N~ 354 (659)
++|+.+++.++.
T Consensus 246 ~~L~~l~l~~~~ 257 (350)
T 4ay9_X 246 VALMEASLTYPS 257 (350)
T ss_dssp CSCCEEECSCHH
T ss_pred cChhhCcCCCCc
Confidence 889988887653
No 350
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.84 E-value=2.5e-22 Score=231.41 Aligned_cols=225 Identities=19% Similarity=0.197 Sum_probs=124.8
Q ss_pred CCHHHHHHHHHHHhcCCCC--CCCCCCCCC-CCCCcCCCCCCCceEeCCCCEeEEEeCCCCCCCCCCCCCcCCccccccc
Q 006145 28 LQSSQAQTLLRIQGLLNNP--AVLSSWNIT-TEFCNTEPTSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLV 104 (659)
Q Consensus 28 ~~~~~~~aLl~~k~~l~~~--~~l~~W~~~-~~~C~w~~~~~~gv~C~~~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~ 104 (659)
....++++|+++...+..+ ..-..|... +..+.|. ++.+...+++.|+|.++.+... +.
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~s~~~~~~l~L~~n~~~~~-~~------------ 190 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTAT-----NSAVSTPLTPKIELFANGKDEA-NQ------------ 190 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCC-----CceecCCccceEEeeCCCCCcc-hh------------
Confidence 4567888999998765321 123346433 3456675 5777778899999988776532 11
Q ss_pred CCCCCCEEEecCCCCcC---------CCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCcccc
Q 006145 105 KLPDLKVLRLVSLGLWG---------PLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWL 175 (659)
Q Consensus 105 ~l~~L~~L~L~~n~l~~---------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l 175 (659)
..|+.++|+.|.+.+ ..|..|..+++|+.|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|
T Consensus 191 --~~l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~ 266 (727)
T 4b8c_D 191 --ALLQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEI 266 (727)
T ss_dssp ---------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGG
T ss_pred --hHhhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhh
Confidence 122333343333322 45778899999999999999998 78888889999999999999998 889999
Q ss_pred CCCCCCCEEEccCCcCCccCCcccCCCCCCcEEeccccccccCCCCCCCCCcCCEEEcccCCCCCCCCCCCc----ccce
Q 006145 176 GSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGK----KLVT 251 (659)
Q Consensus 176 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~----~L~~ 251 (659)
++|++|++|+|++|.|+ .+|..|++|++|++|+|++|.|+..+..|+.+++|++|+|++|.|++.+|..+. .+..
T Consensus 267 ~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~ 345 (727)
T 4b8c_D 267 KNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLI 345 (727)
T ss_dssp GGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHH
T ss_pred hCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhH
Confidence 99999999999999999 789999999999999999999986555699999999999988888776665432 1223
Q ss_pred EecCCCcCCccCchhccCCccccEEeccCc
Q 006145 252 MILSKNKFRSAIPAEVSSYYQLQRLDLSSN 281 (659)
Q Consensus 252 L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N 281 (659)
++|++|.+++.+|.. |+.|++++|
T Consensus 346 l~l~~N~l~~~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 346 FYLRDNRPEIPLPHE------RRFIEINTD 369 (727)
T ss_dssp HHHHHCCCCCCCCCC---------------
T ss_pred HhhccCcccCcCccc------cceeEeecc
Confidence 556666666666543 344455544
No 351
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.84 E-value=2.4e-20 Score=184.48 Aligned_cols=164 Identities=24% Similarity=0.205 Sum_probs=138.0
Q ss_pred CCCCCCCCCCcCCCCCCCceEeCCCCEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccCC
Q 006145 50 SSWNITTEFCNTEPTSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISR 129 (659)
Q Consensus 50 ~~W~~~~~~C~w~~~~~~gv~C~~~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ 129 (659)
.-|......|+|. +|.|...+++ .+|. .+. ++|++|+|++|.+++..|..|.+
T Consensus 10 ~~~~~~~~~Cs~~-----~v~c~~~~l~-----------~ip~---------~~~--~~L~~L~Ls~n~i~~~~~~~~~~ 62 (229)
T 3e6j_A 10 SAACPSQCSCSGT-----TVDCRSKRHA-----------SVPA---------GIP--TNAQILYLHDNQITKLEPGVFDS 62 (229)
T ss_dssp -CCCCTTCEEETT-----EEECTTSCCS-----------SCCS---------CCC--TTCSEEECCSSCCCCCCTTTTTT
T ss_pred hccCCCCCEEeCC-----EeEccCCCcC-----------ccCC---------CCC--CCCCEEEcCCCccCccCHHHhhC
Confidence 3466678889997 6999643322 2222 222 78999999999999999999999
Q ss_pred CCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEe
Q 006145 130 LSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLA 209 (659)
Q Consensus 130 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 209 (659)
+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+
T Consensus 63 l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 141 (229)
T 3e6j_A 63 LINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLA 141 (229)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEE
T ss_pred ccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEE
Confidence 999999999999998666677899999999999999999877788899999999999999999 7888999999999999
Q ss_pred ccccccccCCCC-CCCCCcCCEEEcccCCCCCC
Q 006145 210 LSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQ 241 (659)
Q Consensus 210 Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~ 241 (659)
|++|++++.++. |..+++|+.|+|++|.+...
T Consensus 142 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 142 LDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred CCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 999999987765 88899999999988877643
No 352
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.83 E-value=1.1e-20 Score=212.78 Aligned_cols=172 Identities=27% Similarity=0.332 Sum_probs=87.9
Q ss_pred cCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCE
Q 006145 104 VKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAV 183 (659)
Q Consensus 104 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 183 (659)
..|++|+.|+|++|.+... | .|..|++|+.|+|++|.|++..| +..+++|+.|+|++|.+.+ +| .+..+++|+.
T Consensus 40 ~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~ 113 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKS 113 (605)
T ss_dssp HHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCE
T ss_pred hcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCE
Confidence 3445555555555555432 2 35555555555555555554333 5555555555555555543 22 4555555555
Q ss_pred EEccCCcCCccCCcccCCCCCCcEEeccccccccCCCCCCCCCcCCEEEcccCCCCCCCCCCCcccceEecCCCcCCccC
Q 006145 184 LSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAI 263 (659)
Q Consensus 184 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~ 263 (659)
|+|++|.+++ + +.+..+++|+.|+|++|.+++. +.+..+++|+.|+|++|.+ ++..
T Consensus 114 L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l---------------------~~~~ 169 (605)
T 1m9s_A 114 LSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQI---------------------SDIV 169 (605)
T ss_dssp EECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCC---------------------CCCG
T ss_pred EEecCCCCCC-C-ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcC---------------------CCch
Confidence 5555555553 2 2355555555555555555543 4445555555555555544 4433
Q ss_pred chhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCC
Q 006145 264 PAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG 309 (659)
Q Consensus 264 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 309 (659)
| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++
T Consensus 170 ~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 170 P--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp G--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred h--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 3 55555555555555555542 235555555555555555554
No 353
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.82 E-value=2.2e-20 Score=210.18 Aligned_cols=190 Identities=22% Similarity=0.290 Sum_probs=143.2
Q ss_pred CCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccC
Q 006145 109 LKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRN 188 (659)
Q Consensus 109 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 188 (659)
+..+++..+.+...++ +..|++|+.|+|++|.+.. +| .+..+++|+.|+|++|++++..| +..+++|+.|+|++
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 3444555555555433 4567778888888888763 34 47777888888888888775444 77777788888888
Q ss_pred CcCCccCCcccCCCCCCcEEeccccccccCCCCCCCCCcCCEEEcccCCCCCCCCCCCcccceEecCCCcCCccCchhcc
Q 006145 189 NMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVS 268 (659)
Q Consensus 189 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~ 268 (659)
|.+++ +| .+..+++|+.|+|++|.+++ ++.+..+++|+.|+|++|.+ ++. ..+.
T Consensus 97 N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l~~l~~l~~L~~L~Ls~N~l---------------------~~l--~~l~ 150 (605)
T 1m9s_A 97 NKIKD-LS-SLKDLKKLKSLSLEHNGISD-INGLVHLPQLESLYLGNNKI---------------------TDI--TVLS 150 (605)
T ss_dssp SCCCC-CT-TSTTCTTCCEEECTTSCCCC-CGGGGGCTTCSEEECCSSCC---------------------CCC--GGGG
T ss_pred CCCCC-Ch-hhccCCCCCEEEecCCCCCC-CccccCCCccCEEECCCCcc---------------------CCc--hhhc
Confidence 77774 33 57777777777777777775 35566667777766666655 332 4678
Q ss_pred CCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCccc
Q 006145 269 SYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQ 334 (659)
Q Consensus 269 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ 334 (659)
.+++|+.|+|++|.|++..| +..+++|+.|+|++|+|++. +.+..+++|+.|+|++|++++.
T Consensus 151 ~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 151 RLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp SCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred ccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 89999999999999998766 99999999999999999974 4588999999999999999864
No 354
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.82 E-value=8.3e-20 Score=187.43 Aligned_cols=105 Identities=26% Similarity=0.338 Sum_probs=55.5
Q ss_pred CCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcE
Q 006145 128 SRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRV 207 (659)
Q Consensus 128 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 207 (659)
..+++|+.|++++|.++.. | .+..+++|++|+|++|++++..| +..+++|++|+|++|.+++ +| .+..+++|+.
T Consensus 43 ~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCE
T ss_pred hhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCE
Confidence 3455555555555555422 2 25555555555555555554322 5555555555555555553 22 2555566666
Q ss_pred EeccccccccCCCCCCCCCcCCEEEcccCCCC
Q 006145 208 LALSNNHFYGEVPDFSGLTYLQVLDLENNALG 239 (659)
Q Consensus 208 L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~ 239 (659)
|+|++|++++. +.+..+++|++|++++|.++
T Consensus 117 L~L~~n~i~~~-~~l~~l~~L~~L~l~~n~l~ 147 (291)
T 1h6t_A 117 LSLEHNGISDI-NGLVHLPQLESLYLGNNKIT 147 (291)
T ss_dssp EECTTSCCCCC-GGGGGCTTCCEEECCSSCCC
T ss_pred EECCCCcCCCC-hhhcCCCCCCEEEccCCcCC
Confidence 66666655542 44555555555555555543
No 355
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=9.7e-20 Score=186.92 Aligned_cols=173 Identities=27% Similarity=0.322 Sum_probs=106.9
Q ss_pred ccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCC
Q 006145 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILA 182 (659)
Q Consensus 103 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 182 (659)
+..+++|+.|++++|.+... + .+..+++|+.|+|++|++++..| +.++++|++|+|++|.+++ +| .+..+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCC
T ss_pred hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCC
Confidence 34566677777777766544 2 36667777777777777765433 6677777777777777664 23 366777777
Q ss_pred EEEccCCcCCccCCcccCCCCCCcEEeccccccccCCCCCCCCCcCCEEEcccCCCCCCCCCCCcccceEecCCCcCCcc
Q 006145 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSA 262 (659)
Q Consensus 183 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~ 262 (659)
+|+|++|.+++. +.+..+++|+.|++++|++++. +.+..+++|++|++++|.++ +.
T Consensus 116 ~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~---------------------~~ 171 (291)
T 1h6t_A 116 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQIS---------------------DI 171 (291)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCC---------------------CC
T ss_pred EEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccc---------------------cc
Confidence 777777777643 3566677777777777776654 45666666666655555442 22
Q ss_pred CchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCC
Q 006145 263 IPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG 309 (659)
Q Consensus 263 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 309 (659)
.| +..+++|+.|+|++|.+++ +| .+..+++|+.|++++|+++.
T Consensus 172 ~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 172 VP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp GG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred hh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 12 5556666666666666654 33 25666666666666666553
No 356
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=3.5e-19 Score=174.94 Aligned_cols=133 Identities=26% Similarity=0.296 Sum_probs=122.5
Q ss_pred CCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEc
Q 006145 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (659)
Q Consensus 107 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 186 (659)
++|+.|+|++|.+++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|+|+...+..|..+++|++|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 57999999999999988889999999999999999999888999999999999999999999766677899999999999
Q ss_pred cCCcCCccCCcccCCCCCCcEEeccccccccCCCC-CCCCCcCCEEEcccCCCC
Q 006145 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALG 239 (659)
Q Consensus 187 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~ 239 (659)
++|++++..|..|.++++|+.|+|++|++++..+. |..+++|++|+|++|.+.
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 99999998899999999999999999999988876 888999999999888764
No 357
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=1.7e-19 Score=190.97 Aligned_cols=139 Identities=24% Similarity=0.195 Sum_probs=90.7
Q ss_pred ceEeCCCCEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccC-CCCCCcEEEcccCcCccc
Q 006145 68 TVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKIS-RLSSLEILNMSSNFLNGA 146 (659)
Q Consensus 68 gv~C~~~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~ 146 (659)
.+.|.. ..++++++++.. +|. .+. +.++.|+|++|++++..+..|. ++++|+.|+|++|+|++.
T Consensus 15 ~C~C~~---~~l~c~~~~l~~-iP~---------~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i 79 (361)
T 2xot_A 15 NCLCAS---NILSCSKQQLPN-VPQ---------SLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFI 79 (361)
T ss_dssp TCEEET---TEEECCSSCCSS-CCS---------SCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEE
T ss_pred CCEECC---CEEEeCCCCcCc-cCc---------cCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCcc
Confidence 467753 356777766543 232 111 2467777777777776666666 777777777777777766
Q ss_pred CChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEeccccccccCCCC
Q 006145 147 IPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD 221 (659)
Q Consensus 147 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 221 (659)
.|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++.++.
T Consensus 80 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~ 154 (361)
T 2xot_A 80 SSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVE 154 (361)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGG
T ss_pred ChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHH
Confidence 666677777777777777777666556666777777777777777666666666666666666666666654443
No 358
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=3.8e-19 Score=174.70 Aligned_cols=80 Identities=25% Similarity=0.367 Sum_probs=37.9
Q ss_pred EEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEeccccc
Q 006145 135 ILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNH 214 (659)
Q Consensus 135 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 214 (659)
.+++++|.++ .+|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 3444444444 3333322 344555555555544444444555555555555555554444555555555555555554
Q ss_pred ccc
Q 006145 215 FYG 217 (659)
Q Consensus 215 l~~ 217 (659)
|+.
T Consensus 92 l~~ 94 (220)
T 2v9t_B 92 ITE 94 (220)
T ss_dssp CCC
T ss_pred CCc
Confidence 443
No 359
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=6.2e-19 Score=173.13 Aligned_cols=158 Identities=23% Similarity=0.266 Sum_probs=134.2
Q ss_pred ceEeCCCCEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCC-cccCCCCCCcEEEcccCcCccc
Q 006145 68 TVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLS-GKISRLSSLEILNMSSNFLNGA 146 (659)
Q Consensus 68 gv~C~~~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~ 146 (659)
+++|.. +.++++++.++. +|. .+ .+.+++|+|++|.+++..| ..|..+++|++|+|++|.|++.
T Consensus 8 ~C~C~~---~~l~~s~n~l~~-iP~---------~~--~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i 72 (220)
T 2v70_A 8 KCRCEG---TTVDCSNQKLNK-IPE---------HI--PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDI 72 (220)
T ss_dssp TCEEET---TEEECCSSCCSS-CCS---------CC--CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEE
T ss_pred CCEECC---CEeEeCCCCccc-Ccc---------CC--CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEE
Confidence 355643 367778777653 333 22 2346899999999998865 5689999999999999999988
Q ss_pred CChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEeccccccccCCCC-CCCC
Q 006145 147 IPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGL 225 (659)
Q Consensus 147 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l 225 (659)
.|..|.++++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|.++++|+.|+|++|++++..|. |..+
T Consensus 73 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 152 (220)
T 2v70_A 73 EEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTL 152 (220)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTC
T ss_pred CHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCC
Confidence 888999999999999999999988888899999999999999999999999999999999999999999998775 8889
Q ss_pred CcCCEEEcccCCCCC
Q 006145 226 TYLQVLDLENNALGP 240 (659)
Q Consensus 226 ~~L~~L~L~~N~l~~ 240 (659)
++|++|+|++|.+..
T Consensus 153 ~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 153 HSLSTLNLLANPFNC 167 (220)
T ss_dssp TTCCEEECCSCCEEC
T ss_pred CCCCEEEecCcCCcC
Confidence 999999998888754
No 360
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=1.1e-19 Score=192.48 Aligned_cols=175 Identities=27% Similarity=0.261 Sum_probs=97.4
Q ss_pred CEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhcc-CCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccC
Q 006145 110 KVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELS-ILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRN 188 (659)
Q Consensus 110 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 188 (659)
+.+++++++++. +|..+. +.++.|+|++|+|++..+..+. ++++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 456666666654 343332 2466666666666655555555 666666666666666655555666666666666666
Q ss_pred CcCCccCCcccCCCCCCcEEeccccccccCCCC-CCCCCcCCEEEcccCCCCCCCCCCCcccceEecCCCcCCccCchhc
Q 006145 189 NMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEV 267 (659)
Q Consensus 189 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~ 267 (659)
|+|++..+..|.++++|+.|+|++|++++..|. |.++++|+.|+|++|.|+. ..+..|
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~---------------------l~~~~~ 156 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR---------------------FPVELI 156 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS---------------------CCGGGT
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe---------------------eCHHHh
Confidence 666655555566666666666666666555443 5555555555555554432 111112
Q ss_pred ---cCCccccEEeccCcccccCCchhhcCCCcc--cEEeccCCcCC
Q 006145 268 ---SSYYQLQRLDLSSNRFVGPFPQALLSLPSI--TYLNIADNKLT 308 (659)
Q Consensus 268 ---~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L--~~L~l~~N~l~ 308 (659)
..+++|+.|+|++|+|++..+..+..++.+ +.|+|++|.+.
T Consensus 157 ~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 157 KDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp C----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 345566666666666665444555555542 45555555443
No 361
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=6.9e-19 Score=172.82 Aligned_cols=134 Identities=25% Similarity=0.251 Sum_probs=76.6
Q ss_pred CEEEccCCcCCccCC-cccCCCCCCcEEeccccccccCCC-CCCCCCcCCEEEcccCCCCCCCCCCCcccceEecCCCcC
Q 006145 182 AVLSLRNNMFNGTLP-DSFSYLENLRVLALSNNHFYGEVP-DFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKF 259 (659)
Q Consensus 182 ~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l 259 (659)
++|+|++|++++..| ..|..+++|+.|+|++|++++..+ .|.++++|++|+|++|.+
T Consensus 35 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l--------------------- 93 (220)
T 2v70_A 35 AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRL--------------------- 93 (220)
T ss_dssp SEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC---------------------
T ss_pred CEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCcc---------------------
Confidence 444444444444332 224444555555555555544443 244444444444444333
Q ss_pred CccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCC
Q 006145 260 RSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLP 336 (659)
Q Consensus 260 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip 336 (659)
++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|++++..|..+..+++|+.|++++|.+++..+
T Consensus 94 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 94 ENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 23334445566666666666666666666666777777777777777776667777777777777777777765544
No 362
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=9.9e-19 Score=172.83 Aligned_cols=81 Identities=26% Similarity=0.288 Sum_probs=38.0
Q ss_pred EEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEeccccc
Q 006145 135 ILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNH 214 (659)
Q Consensus 135 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 214 (659)
.++.+++.++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 23 ~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~ 99 (229)
T 3e6j_A 23 TVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99 (229)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCc
Confidence 4444444443 3343322 445555555555554444445555555555555555543333334444445555444444
Q ss_pred cccC
Q 006145 215 FYGE 218 (659)
Q Consensus 215 l~~~ 218 (659)
+++.
T Consensus 100 l~~l 103 (229)
T 3e6j_A 100 LTVL 103 (229)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 4433
No 363
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.79 E-value=7.5e-20 Score=184.31 Aligned_cols=140 Identities=9% Similarity=0.097 Sum_probs=106.2
Q ss_pred CCCCceeccCcCceEEEEEe-cCCcE--EEEEEecccCCCc------------------------hHHHHHHHHHHhCCC
Q 006145 479 FDTSAFMGEGSQGQMYRGRL-KNGTF--VAIRCLKMKKCHS------------------------TRNFMHHIELISKLR 531 (659)
Q Consensus 479 ~~~~~~ig~G~~g~Vy~~~~-~~g~~--vavK~l~~~~~~~------------------------~~~~~~Ei~~l~~l~ 531 (659)
|...+.||+|+||.||+|+. .+|+. ||||+++...... ...+.+|++.|.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 55678999999999999997 67999 9999875431110 125889999999998
Q ss_pred CCCccceeeeeeeccccCCCCceeEEEEeccCC-C----ChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhc-CCCCC
Q 006145 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPN-G----TLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH-TGIVP 605 (659)
Q Consensus 532 H~niv~l~g~~~~~~~~~~~~~~~~lV~Ey~~~-G----sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH-~~~~~ 605 (659)
|+++....-+.. ...+|||||+.+ | +|.++... .++.....++.|++.||+||| +.
T Consensus 129 ~~~i~~p~~~~~---------~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~--- 190 (258)
T 1zth_A 129 EAGVSVPQPYTY---------MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA--- 190 (258)
T ss_dssp HTTCCCCCEEEE---------ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS---
T ss_pred hCCCCCCeEEEc---------CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC---
Confidence 886532222221 136899999942 5 56555432 234456789999999999999 87
Q ss_pred CccccCCCCCceeecCCcceEEccCcccccccc
Q 006145 606 GVFSNNLKITDILLDQNLVAKISSYNLPLLAEN 638 (659)
Q Consensus 606 ~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~ 638 (659)
+|+||||||+|||+++ .++|+|||+|.....
T Consensus 191 givHrDlkp~NILl~~--~~~liDFG~a~~~~~ 221 (258)
T 1zth_A 191 ELVHADLSEYNIMYID--KVYFIDMGQAVTLRH 221 (258)
T ss_dssp CEECSSCSTTSEEESS--SEEECCCTTCEETTS
T ss_pred CEEeCCCCHHHEEEcC--cEEEEECcccccCCC
Confidence 9999999999999998 999999999976543
No 364
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.79 E-value=2.8e-20 Score=214.39 Aligned_cols=215 Identities=19% Similarity=0.178 Sum_probs=103.9
Q ss_pred CCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcc---------cCChhccCCCCCcEEEeecCCCCCCCccccCC
Q 006145 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNG---------AIPQELSILTSLQTLILDENMLAGRVPDWLGS 177 (659)
Q Consensus 107 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~---------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 177 (659)
+.++.|+|..|.+... +.. .|+.++|+.|.|.+ ..|..+..+++|+.|+|++|.+. .+|..+..
T Consensus 173 ~~~~~l~L~~n~~~~~-~~~-----~l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~ 245 (727)
T 4b8c_D 173 PLTPKIELFANGKDEA-NQA-----LLQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFK 245 (727)
T ss_dssp -------------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGG
T ss_pred CccceEEeeCCCCCcc-hhh-----HhhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcC
Confidence 5577888888887663 322 23444444444432 44666777777888888888776 66666667
Q ss_pred CCCCCEEEccCCcCCccCCcccCCCCCCcEEeccccccccCCCCCCCCCcCCEEEcccCCCCCCCCCCCcccceEecCCC
Q 006145 178 LPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKN 257 (659)
Q Consensus 178 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N 257 (659)
+++|++|+|++|.|+ .+|..|++|++|++|+|++|+|+..+..|++|++|++|+|++|.|+
T Consensus 246 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~------------------ 306 (727)
T 4b8c_D 246 YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVT------------------ 306 (727)
T ss_dssp CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCC------------------
T ss_pred CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCC------------------
Confidence 777888888888777 6777777777788888887777744344777777777777666552
Q ss_pred cCCccCchhccCCccccEEeccCcccccCCchhhcCCCc-ccEEeccCCcCCCcCCcCCCCCCCCCEEECcCC-------
Q 006145 258 KFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPS-ITYLNIADNKLTGKLFDDLSCNPELGFVDLSSN------- 329 (659)
Q Consensus 258 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~-L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N------- 329 (659)
.+|..|+.+++|+.|+|++|.|++.+|..+..+.. +..|+|++|.++|.+|.. |..|+++.|
T Consensus 307 ----~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~ 376 (727)
T 4b8c_D 307 ----TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREY 376 (727)
T ss_dssp ----CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----------------------
T ss_pred ----ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeeccccccccc
Confidence 46667888888888888888888888877765432 234778888888877764 345666666
Q ss_pred -CCcccCChhhhCCCCCCEEEcCCccccC
Q 006145 330 -LLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (659)
Q Consensus 330 -~l~g~ip~~~~~~~~l~~l~~~~N~l~~ 357 (659)
.+++.++..+..+.++....++.|.+.+
T Consensus 377 ~~l~~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 377 DSLQQSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp -------------------------CCCG
T ss_pred CCccccccchhhcccccceeeeecccccc
Confidence 3333334444455556666777777653
No 365
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.79 E-value=4.2e-22 Score=222.83 Aligned_cols=201 Identities=20% Similarity=0.192 Sum_probs=120.7
Q ss_pred CCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCC-------------CCCCCccccCCCCCCCEEE-ccCCcCCc
Q 006145 128 SRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENM-------------LAGRVPDWLGSLPILAVLS-LRNNMFNG 193 (659)
Q Consensus 128 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-------------l~~~~p~~l~~l~~L~~L~-L~~N~l~~ 193 (659)
..+++|+.|+|++|+++ .+|..++++++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 55667777777777775 667777777777777775554 4445555555555555555 4444321
Q ss_pred cCCcccCCCCCCcEEeccccccccCCCCCCCCCcCCEEEcccCCCCCCCCCC--CcccceEecCCCcCCccCchhccCCc
Q 006145 194 TLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKV--GKKLVTMILSKNKFRSAIPAEVSSYY 271 (659)
Q Consensus 194 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~~p~~~~~l~ 271 (659)
+|+.+.+++|.++...+ ..|+.|+|++|.|++. |.. +++|+.|+|++|+|+ .+|..++.++
T Consensus 424 ----------~L~~l~l~~n~i~~l~~-----~~L~~L~Ls~n~l~~l-p~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 486 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLKMEY-----ADVRVLHLAHKDLTVL-CHLEQLLLVTHLDLSHNRLR-ALPPALAALR 486 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHHH-----TTCSEEECTTSCCSSC-CCGGGGTTCCEEECCSSCCC-CCCGGGGGCT
T ss_pred ----------hhhhhhhhcccccccCc-----cCceEEEecCCCCCCC-cCccccccCcEeecCccccc-ccchhhhcCC
Confidence 22333333343333221 1245555555555442 222 234555555555555 5667777777
Q ss_pred cccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcC-CcCCCCCCCCCEEECcCCCCcccCChh---hhCCCCCCE
Q 006145 272 QLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKL-FDDLSCNPELGFVDLSSNLLTGQLPNC---LLAGSKNRV 347 (659)
Q Consensus 272 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~-p~~~~~~~~L~~L~ls~N~l~g~ip~~---~~~~~~l~~ 347 (659)
+|+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.. |..+..+++|+.|+|++|++++.+|.. +..+++|+.
T Consensus 487 ~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~ 564 (567)
T 1dce_A 487 CLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSS 564 (567)
T ss_dssp TCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSE
T ss_pred CCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCc
Confidence 77777777777775 56 6777777777777777777766 777777777777777777777654432 223556666
Q ss_pred EE
Q 006145 348 VL 349 (659)
Q Consensus 348 l~ 349 (659)
|+
T Consensus 565 L~ 566 (567)
T 1dce_A 565 IL 566 (567)
T ss_dssp EE
T ss_pred cC
Confidence 54
No 366
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.78 E-value=6.5e-19 Score=169.84 Aligned_cols=106 Identities=16% Similarity=0.214 Sum_probs=49.2
Q ss_pred CCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEE
Q 006145 105 KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVL 184 (659)
Q Consensus 105 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 184 (659)
.+++|+.|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|+|++|.+++..|..++.+++|++|
T Consensus 42 ~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 117 (197)
T 4ezg_A 42 QMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117 (197)
T ss_dssp HHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEE
T ss_pred hcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEE
Confidence 3444455555555444 223 3444455555555555333 12234444445555555554444444444444444444
Q ss_pred EccCCcCCccCCcccCCCCCCcEEeccccc
Q 006145 185 SLRNNMFNGTLPDSFSYLENLRVLALSNNH 214 (659)
Q Consensus 185 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 214 (659)
++++|.+++..|..++.+++|++|++++|.
T Consensus 118 ~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~ 147 (197)
T 4ezg_A 118 DISHSAHDDSILTKINTLPKVNSIDLSYNG 147 (197)
T ss_dssp ECCSSBCBGGGHHHHTTCSSCCEEECCSCT
T ss_pred EecCCccCcHhHHHHhhCCCCCEEEccCCC
Confidence 444444444444444444444444444444
No 367
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.77 E-value=6.5e-21 Score=215.40 Aligned_cols=132 Identities=8% Similarity=0.058 Sum_probs=75.7
Q ss_pred CCcCCEEEcccCCCCCCCCC----CCcccceEecC----CCcCCcc-----CchhccCCccccEEeccCc--ccccCCch
Q 006145 225 LTYLQVLDLENNALGPQFPK----VGKKLVTMILS----KNKFRSA-----IPAEVSSYYQLQRLDLSSN--RFVGPFPQ 289 (659)
Q Consensus 225 l~~L~~L~L~~N~l~~~~~~----~~~~L~~L~l~----~N~l~~~-----~p~~~~~l~~L~~L~Ls~N--~l~~~~p~ 289 (659)
+++|++|+++.|.+++..+. .+++|+.|+++ .|.+++. ++..+.++++|+.|++++| .+++..+.
T Consensus 377 ~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~ 456 (592)
T 3ogk_B 377 CQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLS 456 (592)
T ss_dssp CTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHH
T ss_pred CccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHH
Confidence 45555555555554432221 13456666664 5555543 2333555666677776543 25544444
Q ss_pred hhc-CCCcccEEeccCCcCCC-cCCcCCCCCCCCCEEECcCCCCccc-CChhhhCCCCCCEEEcCCcccc
Q 006145 290 ALL-SLPSITYLNIADNKLTG-KLFDDLSCNPELGFVDLSSNLLTGQ-LPNCLLAGSKNRVVLYARNCLA 356 (659)
Q Consensus 290 ~l~-~l~~L~~L~l~~N~l~~-~~p~~~~~~~~L~~L~ls~N~l~g~-ip~~~~~~~~l~~l~~~~N~l~ 356 (659)
.+. .+++|+.|++++|++++ .++..+..+++|+.|++++|.+++. ++.....+++|+.+++++|.++
T Consensus 457 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it 526 (592)
T 3ogk_B 457 YIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRAS 526 (592)
T ss_dssp HHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCC
T ss_pred HHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCC
Confidence 443 36777777777777765 2334445667777777777777654 3444456677777777777765
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.77 E-value=3.3e-19 Score=180.14 Aligned_cols=171 Identities=19% Similarity=0.240 Sum_probs=125.2
Q ss_pred CCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEE
Q 006145 129 RLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVL 208 (659)
Q Consensus 129 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 208 (659)
.+.++..++++.|.+++. + .+..+++|++|++++|.++ .+| .+..+++|+.|+|++|++++..| +.++++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 566777888888888743 3 5677888888888888887 455 67778888888888888875443 7788888888
Q ss_pred eccccccccCCCCCCCCCcCCEEEcccCCCCCCCCCCCcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCc
Q 006145 209 ALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFP 288 (659)
Q Consensus 209 ~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 288 (659)
+|++|++++. |.+.. ++|++|+|++|.+ ++ ++ .+..+++|+.|+|++|++++. |
T Consensus 91 ~L~~N~l~~l-~~~~~-~~L~~L~L~~N~l---------------------~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~ 144 (263)
T 1xeu_A 91 SVNRNRLKNL-NGIPS-ACLSRLFLDNNEL---------------------RD-TD-SLIHLKNLEILSIRNNKLKSI-V 144 (263)
T ss_dssp ECCSSCCSCC-TTCCC-SSCCEEECCSSCC---------------------SB-SG-GGTTCTTCCEEECTTSCCCBC-G
T ss_pred ECCCCccCCc-Ccccc-CcccEEEccCCcc---------------------CC-Ch-hhcCcccccEEECCCCcCCCC-h
Confidence 8888887763 33333 5566666655554 33 22 477788888888888888764 3
Q ss_pred hhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCccc
Q 006145 289 QALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQ 334 (659)
Q Consensus 289 ~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ 334 (659)
.+..+++|+.|++++|++++. ..+..+++|+.|++++|.+++.
T Consensus 145 -~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 145 -MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred -HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 577888888888888888876 5677788888888888888754
No 369
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=1.7e-18 Score=166.93 Aligned_cols=153 Identities=13% Similarity=0.213 Sum_probs=92.9
Q ss_pred cCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCc
Q 006145 127 ISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLR 206 (659)
Q Consensus 127 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 206 (659)
...+++|+.|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|.+++..|..|+.+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 356677788888888777 555 5777777888888777654 334677777777777777777766666777777777
Q ss_pred EEeccccccccCCCC-CCCCCcCCEEEcccCC-CCCCCCCCCcccceEecCCCcCCccCchhccCCccccEEeccCcccc
Q 006145 207 VLALSNNHFYGEVPD-FSGLTYLQVLDLENNA-LGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFV 284 (659)
Q Consensus 207 ~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~-l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 284 (659)
+|++++|++++..+. +..+++|++|++++|. ++ .+| .+..+++|+.|++++|.++
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~----------------------~~~-~l~~l~~L~~L~l~~n~i~ 172 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT----------------------DIM-PLKTLPELKSLNIQFDGVH 172 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC----------------------CCG-GGGGCSSCCEEECTTBCCC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc----------------------ccH-hhcCCCCCCEEECCCCCCc
Confidence 777777777654333 5555666665555554 21 122 3444555555555555554
Q ss_pred cCCchhhcCCCcccEEeccCCcCC
Q 006145 285 GPFPQALLSLPSITYLNIADNKLT 308 (659)
Q Consensus 285 ~~~p~~l~~l~~L~~L~l~~N~l~ 308 (659)
+ ++ .+..+++|+.|++++|++.
T Consensus 173 ~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 173 D-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp C-CT-TGGGCSSCCEEEECBC---
T ss_pred C-hH-HhccCCCCCEEEeeCcccC
Confidence 3 22 3444555555555555443
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.77 E-value=3e-19 Score=180.41 Aligned_cols=171 Identities=22% Similarity=0.293 Sum_probs=125.9
Q ss_pred CCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEE
Q 006145 105 KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVL 184 (659)
Q Consensus 105 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 184 (659)
++.++..++++.|.+++.. .+..+++|+.|++++|.++ .+| .+..+++|++|+|++|++++..| +..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4555667778888876644 5778889999999999887 455 68888999999999999886544 8889999999
Q ss_pred EccCCcCCccCCcccCCCCCCcEEeccccccccCCCCCCCCCcCCEEEcccCCCCCCCCCCCcccceEecCCCcCCccCc
Q 006145 185 SLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIP 264 (659)
Q Consensus 185 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p 264 (659)
+|++|++++ +|.. .. ++|+.|+|++|++++. +.+..+++|+.|+|++|++++. |
T Consensus 91 ~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~~-~~l~~l~~L~~L~Ls~N~i~~~----------------------~ 144 (263)
T 1xeu_A 91 SVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRDT-DSLIHLKNLEILSIRNNKLKSI----------------------V 144 (263)
T ss_dssp ECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSBS-GGGTTCTTCCEEECTTSCCCBC----------------------G
T ss_pred ECCCCccCC-cCcc-cc-CcccEEEccCCccCCC-hhhcCcccccEEECCCCcCCCC----------------------h
Confidence 999999885 4433 33 8899999999998874 5688888888888887776532 2
Q ss_pred hhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCc
Q 006145 265 AEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGK 310 (659)
Q Consensus 265 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~ 310 (659)
.+..+++|+.|+|++|++++. ..+..+++|+.|++++|.+++.
T Consensus 145 -~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 145 -MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred -HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 355566666666666666654 4566666677777777666644
No 371
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.76 E-value=8.1e-21 Score=214.65 Aligned_cols=227 Identities=13% Similarity=0.024 Sum_probs=110.1
Q ss_pred CCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCC---CCCccccCCCCCCCEEEccCCcCCccCCcccCCCCC
Q 006145 128 SRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLA---GRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLEN 204 (659)
Q Consensus 128 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~---~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 204 (659)
.++++|+.|+|++|.+.+ +|..+.++++|+.|+++.+... +..+..+..+++|+.|+++++. .+.+|..+..+++
T Consensus 217 ~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~ 294 (592)
T 3ogk_B 217 RNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQ 294 (592)
T ss_dssp HHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGG
T ss_pred hhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHHhhcCC
Confidence 344444444444444442 3344444444444444432111 1222334444455555554432 2345666677778
Q ss_pred CcEEeccccccccCCC-C-CCCCCcCCEEEcccCCCCCCCCC---CCcccceEecC-----------CCcCCcc-Cchhc
Q 006145 205 LRVLALSNNHFYGEVP-D-FSGLTYLQVLDLENNALGPQFPK---VGKKLVTMILS-----------KNKFRSA-IPAEV 267 (659)
Q Consensus 205 L~~L~Ls~N~l~~~~p-~-~~~l~~L~~L~L~~N~l~~~~~~---~~~~L~~L~l~-----------~N~l~~~-~p~~~ 267 (659)
|++|+|++|.+++... . +..+++|++|+++++...+.++. .+++|++|+++ .|.+++. ++..+
T Consensus 295 L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~ 374 (592)
T 3ogk_B 295 IRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALA 374 (592)
T ss_dssp CCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHH
T ss_pred CcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHH
Confidence 8888888877654322 1 45666777777763211111111 13456666666 2444432 12223
Q ss_pred cCCccccEEeccCcccccCCchhhcC-CCcccEEecc----CCcCCCc-----CCcCCCCCCCCCEEECcCC--CCcccC
Q 006145 268 SSYYQLQRLDLSSNRFVGPFPQALLS-LPSITYLNIA----DNKLTGK-----LFDDLSCNPELGFVDLSSN--LLTGQL 335 (659)
Q Consensus 268 ~~l~~L~~L~Ls~N~l~~~~p~~l~~-l~~L~~L~l~----~N~l~~~-----~p~~~~~~~~L~~L~ls~N--~l~g~i 335 (659)
..+++|++|+++.|++++..+..+.. +++|+.|+++ .|++++. ++..+..+++|+.|+++++ .+++..
T Consensus 375 ~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~ 454 (592)
T 3ogk_B 375 QGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLG 454 (592)
T ss_dssp HHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHH
T ss_pred hhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHH
Confidence 34566666666666666555555544 5666666664 4555542 1222334555555555432 244443
Q ss_pred ChhhhC-CCCCCEEEcCCcccc
Q 006145 336 PNCLLA-GSKNRVVLYARNCLA 356 (659)
Q Consensus 336 p~~~~~-~~~l~~l~~~~N~l~ 356 (659)
+..+.. +++++.++++.|.++
T Consensus 455 ~~~~~~~~~~L~~L~L~~n~l~ 476 (592)
T 3ogk_B 455 LSYIGQYSPNVRWMLLGYVGES 476 (592)
T ss_dssp HHHHHHSCTTCCEEEECSCCSS
T ss_pred HHHHHHhCccceEeeccCCCCC
Confidence 333332 445555555555543
No 372
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.74 E-value=4.3e-21 Score=214.69 Aligned_cols=189 Identities=19% Similarity=0.154 Sum_probs=161.2
Q ss_pred cCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCc-------------CCccCCcccCCCCCCcEEe-cccccccc
Q 006145 152 SILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM-------------FNGTLPDSFSYLENLRVLA-LSNNHFYG 217 (659)
Q Consensus 152 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~L~~L~-Ls~N~l~~ 217 (659)
..+++|+.|+|++|++. .+|..++++++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 56788889999999886 778888888899988887775 5667777788888888888 676654
Q ss_pred CCCCCCCCCcCCEEEcccCCCCCCCCCCCcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCcc
Q 006145 218 EVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSI 297 (659)
Q Consensus 218 ~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 297 (659)
.+|..+.+++|.++...+ ..|+.|+|++|+|++ +|. ++.+++|+.|+|++|+|+ .+|..++.+++|
T Consensus 423 --------~~L~~l~l~~n~i~~l~~---~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L 488 (567)
T 1dce_A 423 --------DDLRSKFLLENSVLKMEY---ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCL 488 (567)
T ss_dssp --------HHHHHHHHHHHHHHHHHH---TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTC
T ss_pred --------chhhhhhhhcccccccCc---cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCC
Confidence 245566677777654332 258999999999988 676 999999999999999999 789999999999
Q ss_pred cEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccC-ChhhhCCCCCCEEEcCCccccCCC
Q 006145 298 TYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQL-PNCLLAGSKNRVVLYARNCLAAGN 359 (659)
Q Consensus 298 ~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~i-p~~~~~~~~l~~l~~~~N~l~~~~ 359 (659)
+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.+ |..+..+++|+.+++++|.+++..
T Consensus 489 ~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 489 EVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 549 (567)
T ss_dssp CEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred CEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCc
Confidence 999999999997 66 8999999999999999999887 999999999999999999998654
No 373
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=4.2e-18 Score=163.45 Aligned_cols=113 Identities=27% Similarity=0.285 Sum_probs=87.3
Q ss_pred CCCEEEecCCCCcCCCCc-ccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEc
Q 006145 108 DLKVLRLVSLGLWGPLSG-KISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (659)
Q Consensus 108 ~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 186 (659)
+|++|+|++|.+++..+. .|..+++|++|+|++|.|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 677888888888776654 4777888888888888888777777888888888888888887777777777788888888
Q ss_pred cCCcCCccCCcccCCCCCCcEEeccccccccCCC
Q 006145 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP 220 (659)
Q Consensus 187 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 220 (659)
++|++++..|..|..+++|++|+|++|.+++..+
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 8888877777777777777777777777776543
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=1.5e-17 Score=159.54 Aligned_cols=131 Identities=23% Similarity=0.261 Sum_probs=111.9
Q ss_pred CEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCCh-hccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccC
Q 006145 110 KVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQ-ELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRN 188 (659)
Q Consensus 110 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 188 (659)
+.+++++|++ +.+|..+.. +|++|+|++|.|++..+. .|.++++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l-~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGL-KEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCC-SSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCc-CcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 4566666766 345555543 899999999999877665 489999999999999999999999999999999999999
Q ss_pred CcCCccCCcccCCCCCCcEEeccccccccCCCC-CCCCCcCCEEEcccCCCCCCCC
Q 006145 189 NMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFP 243 (659)
Q Consensus 189 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~ 243 (659)
|+|++..|..|.++++|++|+|++|++++.+|. |..+++|++|+|++|.+.+..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 999999888899999999999999999998775 8889999999999988875443
No 375
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.71 E-value=2.2e-17 Score=154.65 Aligned_cols=135 Identities=24% Similarity=0.218 Sum_probs=118.6
Q ss_pred CCCCCCEEEecCCCCc-CCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCE
Q 006145 105 KLPDLKVLRLVSLGLW-GPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAV 183 (659)
Q Consensus 105 ~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 183 (659)
..++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3478999999999998 78888899999999999999999865 67899999999999999999888888888999999
Q ss_pred EEccCCcCCccC-CcccCCCCCCcEEeccccccccCCC----CCCCCCcCCEEEcccCCCCCC
Q 006145 184 LSLRNNMFNGTL-PDSFSYLENLRVLALSNNHFYGEVP----DFSGLTYLQVLDLENNALGPQ 241 (659)
Q Consensus 184 L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~l~~L~~L~L~~N~l~~~ 241 (659)
|+|++|.+++.. +..+..+++|+.|++++|.+++.++ .+..+++|++|++++|.+...
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 162 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEA 162 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBC
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhc
Confidence 999999998642 2788999999999999999998877 488899999999999987543
No 376
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.68 E-value=2.6e-17 Score=150.95 Aligned_cols=129 Identities=27% Similarity=0.257 Sum_probs=112.4
Q ss_pred CCCCCCEEEecCCCCc-CCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCE
Q 006145 105 KLPDLKVLRLVSLGLW-GPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAV 183 (659)
Q Consensus 105 ~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 183 (659)
..++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+.++++|++|+|++|.+++.+|..+..+++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3467899999999998 78888889999999999999999866 67889999999999999999888888888999999
Q ss_pred EEccCCcCCcc-CCcccCCCCCCcEEeccccccccCCC----CCCCCCcCCEEEccc
Q 006145 184 LSLRNNMFNGT-LPDSFSYLENLRVLALSNNHFYGEVP----DFSGLTYLQVLDLEN 235 (659)
Q Consensus 184 L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~l~~L~~L~L~~ 235 (659)
|++++|.+++. .|..++.+++|++|++++|.+++.++ .+..+++|+.|++++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 99999999874 44788999999999999999998776 378889999998763
No 377
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=9e-17 Score=150.49 Aligned_cols=85 Identities=28% Similarity=0.221 Sum_probs=56.1
Q ss_pred CCCcEEEcccCcCc-ccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEe
Q 006145 131 SSLEILNMSSNFLN-GAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLA 209 (659)
Q Consensus 131 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 209 (659)
++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 56777777777776 56666666677777777777776644 5566666666666666666665665555566666666
Q ss_pred cccccccc
Q 006145 210 LSNNHFYG 217 (659)
Q Consensus 210 Ls~N~l~~ 217 (659)
|++|++++
T Consensus 102 Ls~N~l~~ 109 (168)
T 2ell_A 102 LSGNKLKD 109 (168)
T ss_dssp CBSSSCCS
T ss_pred ccCCccCc
Confidence 66666554
No 378
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.65 E-value=4.4e-16 Score=147.16 Aligned_cols=114 Identities=25% Similarity=0.260 Sum_probs=77.0
Q ss_pred CCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEc
Q 006145 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (659)
Q Consensus 107 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 186 (659)
++|+.|++++|.+++..+..|..+++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..+..+++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 46777777777777666666677777777777777777555555667777777777777777655556666777777777
Q ss_pred cCCcCCccCCcccCCCCCCcEEeccccccccCCC
Q 006145 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP 220 (659)
Q Consensus 187 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 220 (659)
++|.+++..+..|..+++|+.|+|++|.+.+..|
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 7777765544455666666666666666665444
No 379
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.65 E-value=1e-15 Score=146.91 Aligned_cols=106 Identities=25% Similarity=0.332 Sum_probs=53.9
Q ss_pred CCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEecc
Q 006145 132 SLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALS 211 (659)
Q Consensus 132 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 211 (659)
+|+.|+|++|.|+ .+|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+|++..|..|.++++|+.|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 4444555555544 344445555555555555555554444445555555555555555554444455555555555555
Q ss_pred ccccccCCCC-CCCCCcCCEEEcccCCC
Q 006145 212 NNHFYGEVPD-FSGLTYLQVLDLENNAL 238 (659)
Q Consensus 212 ~N~l~~~~p~-~~~l~~L~~L~L~~N~l 238 (659)
+|++++.++. |..+++|+.|+|++|.+
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 138 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPL 138 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCE
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCe
Confidence 5555544443 44555555555555544
No 380
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.64 E-value=1.1e-16 Score=167.87 Aligned_cols=145 Identities=13% Similarity=0.151 Sum_probs=101.1
Q ss_pred HHHHhhcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCC-----C---------chHHHH--------HHHHHHh
Q 006145 471 ELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKC-----H---------STRNFM--------HHIELIS 528 (659)
Q Consensus 471 ~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~-----~---------~~~~~~--------~Ei~~l~ 528 (659)
.+.....-|.....||+|++|.||+|...+|+.||||+++.... . ...... +|...|.
T Consensus 89 ~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~ 168 (397)
T 4gyi_A 89 THAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMK 168 (397)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHH
Confidence 33333334788899999999999999988899999998753210 0 111222 3444555
Q ss_pred CCCCCCccceeeeeeeccccCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCcc
Q 006145 529 KLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVF 608 (659)
Q Consensus 529 ~l~H~niv~l~g~~~~~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ii 608 (659)
++.+.++....-+.. ...+|||||+++++|.++... .....++.|++.+|.|||+. +||
T Consensus 169 rL~~~gv~vp~p~~~---------~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~~---gIV 227 (397)
T 4gyi_A 169 ALYEEGFPVPEPIAQ---------SRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAKH---GLI 227 (397)
T ss_dssp HHHHTTCSCCCEEEE---------ETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHHT---TEE
T ss_pred HHHhcCCCCCeeeec---------cCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHHC---CCc
Confidence 553333221111111 124799999999998876432 12346789999999999998 999
Q ss_pred ccCCCCCceeecCCc----------ceEEccCcccccc
Q 006145 609 SNNLKITDILLDQNL----------VAKISSYNLPLLA 636 (659)
Q Consensus 609 HrDlk~~NILld~~~----------~~kl~DFGla~~~ 636 (659)
||||||.|||+++++ .+.|.||+-+...
T Consensus 228 HrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 228 HGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp CSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred CCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence 999999999998876 3899999987543
No 381
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=1.8e-15 Score=142.92 Aligned_cols=130 Identities=28% Similarity=0.266 Sum_probs=102.0
Q ss_pred CEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCC
Q 006145 110 KVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNN 189 (659)
Q Consensus 110 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N 189 (659)
+.+++++|+++. +|..+ .++|+.|++++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 445566666644 33333 368899999999998776677888999999999999998776777888999999999999
Q ss_pred cCCccCCcccCCCCCCcEEeccccccccCCCC-CCCCCcCCEEEcccCCCCCCC
Q 006145 190 MFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQF 242 (659)
Q Consensus 190 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~ 242 (659)
.+++..+..|..+++|+.|+|++|++++.++. +..+++|++|+|++|.+.+..
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 99877777788889999999999988877665 577888888888888776544
No 382
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=2.3e-16 Score=144.60 Aligned_cols=128 Identities=24% Similarity=0.133 Sum_probs=103.2
Q ss_pred CCCCCcEEEcccCcCc-ccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcE
Q 006145 129 RLSSLEILNMSSNFLN-GAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRV 207 (659)
Q Consensus 129 ~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 207 (659)
..++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|.+++.+|..+..+++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3478999999999998 78888888999999999999999865 77888999999999999998878888888899999
Q ss_pred EeccccccccCC--CCCCCCCcCCEEEcccCCCCCCCCCCCcccceEecCCCcCCccCc---hhccCCccccEEecc
Q 006145 208 LALSNNHFYGEV--PDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIP---AEVSSYYQLQRLDLS 279 (659)
Q Consensus 208 L~Ls~N~l~~~~--p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p---~~~~~l~~L~~L~Ls 279 (659)
|++++|++++.. ..+..+++|++|++++|.++ +..+ ..+..+++|+.||++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~---------------------~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVT---------------------NLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGG---------------------GSTTHHHHHHHHCTTCCEETTB
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCccc---------------------chHHHHHHHHHHCCCcccccCC
Confidence 999999988743 45778888888777776654 3333 356777777777765
No 383
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.61 E-value=1.4e-17 Score=187.94 Aligned_cols=274 Identities=17% Similarity=0.120 Sum_probs=131.1
Q ss_pred CCEeEEEeCCCCCCCCCCCCCcCCcccccccCCCCCCEEEecCCCCcCCCCcccC----CCCCCcEEEcccCc--Ccc-c
Q 006145 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKIS----RLSSLEILNMSSNF--LNG-A 146 (659)
Q Consensus 74 ~~v~~L~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~----~l~~L~~L~Ls~N~--l~~-~ 146 (659)
.+++.|+|.++...+ ...++..+.++++|++|+|++|.+++..+..+. .+++|+.|++++|. ++. .
T Consensus 130 ~~L~~L~L~~~~~~~-------~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~ 202 (594)
T 2p1m_B 130 KNFKVLVLSSCEGFS-------TDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSA 202 (594)
T ss_dssp TTCCEEEEESCEEEE-------HHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHH
T ss_pred CCCcEEeCCCcCCCC-------HHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHH
Confidence 478888888763110 011222334677777777777776655443333 55677777777775 221 1
Q ss_pred CChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCc--------------------------CC----ccCC
Q 006145 147 IPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM--------------------------FN----GTLP 196 (659)
Q Consensus 147 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~--------------------------l~----~~~p 196 (659)
++..+.++++|++|+|++|...+.+|..+..+++|+.|+++.+. +. +.+|
T Consensus 203 l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~ 282 (594)
T 2p1m_B 203 LERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLP 282 (594)
T ss_dssp HHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGG
T ss_pred HHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHH
Confidence 12223445777777777662222244444444555555433221 10 1122
Q ss_pred cccCCCCCCcEEeccccccccCCC-C-CCCCCcCCEEEcccC---------------------------------CCCCC
Q 006145 197 DSFSYLENLRVLALSNNHFYGEVP-D-FSGLTYLQVLDLENN---------------------------------ALGPQ 241 (659)
Q Consensus 197 ~~~~~l~~L~~L~Ls~N~l~~~~p-~-~~~l~~L~~L~L~~N---------------------------------~l~~~ 241 (659)
..+..+++|+.|+|++|.+++... . +..+++|++|++++| .+++.
T Consensus 283 ~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~ 362 (594)
T 2p1m_B 283 AVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQ 362 (594)
T ss_dssp GGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHH
T ss_pred HHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCccCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHH
Confidence 222244556666665555443211 1 334455555555544 11110
Q ss_pred CC----CCCcccceEecCCCcCCccCchhcc-CCccccEEecc--C----ccccc-----CCchhhcCCCcccEEeccCC
Q 006145 242 FP----KVGKKLVTMILSKNKFRSAIPAEVS-SYYQLQRLDLS--S----NRFVG-----PFPQALLSLPSITYLNIADN 305 (659)
Q Consensus 242 ~~----~~~~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~~-----~~p~~l~~l~~L~~L~l~~N 305 (659)
.. ..+++|+.|+++.|.+++..+..+. .+++|+.|+++ + |++++ .++..+..+++|+.|++++
T Consensus 363 ~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~- 441 (594)
T 2p1m_B 363 GLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG- 441 (594)
T ss_dssp HHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-
T ss_pred HHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-
Confidence 00 0123445555544554443333332 34555555555 2 33331 1122244455555555544
Q ss_pred cCCCcCCcCCCC-CCCCCEEECcCCCCcccCChhh-hCCCCCCEEEcCCccc
Q 006145 306 KLTGKLFDDLSC-NPELGFVDLSSNLLTGQLPNCL-LAGSKNRVVLYARNCL 355 (659)
Q Consensus 306 ~l~~~~p~~~~~-~~~L~~L~ls~N~l~g~ip~~~-~~~~~l~~l~~~~N~l 355 (659)
.+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.+++++|.+
T Consensus 442 ~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 442 LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 444333333332 5566666666666655444433 4456666666666655
No 384
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.61 E-value=4.3e-18 Score=192.28 Aligned_cols=202 Identities=14% Similarity=0.039 Sum_probs=130.1
Q ss_pred CCCCCcEEEeecCCCCCCCc-cccCCCCCCCEEEccCCcCCc-cCCcccCCCCCCcEEeccc---------cccccCC-C
Q 006145 153 ILTSLQTLILDENMLAGRVP-DWLGSLPILAVLSLRNNMFNG-TLPDSFSYLENLRVLALSN---------NHFYGEV-P 220 (659)
Q Consensus 153 ~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~---------N~l~~~~-p 220 (659)
.+++|++|+|++|.+++... ..+..+++|+.|++++| ++. .++.....+++|+.|++++ |.+++.. .
T Consensus 287 ~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~ 365 (594)
T 2p1m_B 287 VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLV 365 (594)
T ss_dssp HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHH
T ss_pred hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHH
Confidence 44555556665555443221 22445566666666655 221 1122222456666666632 2332211 1
Q ss_pred CC-CCCCcCCEEEcccCCCCCCCCC----CCcccceEecC--C----CcCCcc-----CchhccCCccccEEeccCcccc
Q 006145 221 DF-SGLTYLQVLDLENNALGPQFPK----VGKKLVTMILS--K----NKFRSA-----IPAEVSSYYQLQRLDLSSNRFV 284 (659)
Q Consensus 221 ~~-~~l~~L~~L~L~~N~l~~~~~~----~~~~L~~L~l~--~----N~l~~~-----~p~~~~~l~~L~~L~Ls~N~l~ 284 (659)
.+ .++++|+.|+++.|.+++..+. .+++|+.|+++ + |.++.. ++..+..+++|+.|+|++ +++
T Consensus 366 ~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~ 444 (594)
T 2p1m_B 366 SVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLT 444 (594)
T ss_dssp HHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCC
T ss_pred HHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-ccc
Confidence 11 2478899999988888754332 25789999999 4 566532 223367789999999987 777
Q ss_pred cCCchhhcC-CCcccEEeccCCcCCCcCCcCC-CCCCCCCEEECcCCCCcccCCh-hhhCCCCCCEEEcCCcccc
Q 006145 285 GPFPQALLS-LPSITYLNIADNKLTGKLFDDL-SCNPELGFVDLSSNLLTGQLPN-CLLAGSKNRVVLYARNCLA 356 (659)
Q Consensus 285 ~~~p~~l~~-l~~L~~L~l~~N~l~~~~p~~~-~~~~~L~~L~ls~N~l~g~ip~-~~~~~~~l~~l~~~~N~l~ 356 (659)
+..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|++++|.+++..+. ....+++|+.+++++|.++
T Consensus 445 ~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 445 DKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVS 519 (594)
T ss_dssp HHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCB
T ss_pred HHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCC
Confidence 666666665 8999999999999987655444 5689999999999999765544 3345788999999988653
No 385
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.61 E-value=5.5e-15 Score=141.75 Aligned_cols=128 Identities=20% Similarity=0.205 Sum_probs=97.5
Q ss_pred CEEEcccCCCCCCCCCCCcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCC
Q 006145 229 QVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLT 308 (659)
Q Consensus 229 ~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~ 308 (659)
+++++++|.++..+.....+|+.|++++|+|+ .+|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+
T Consensus 13 ~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~ 91 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 91 (193)
T ss_dssp TEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccC
Confidence 34555555555444334456667777777775 46678888888888888888888877778888888888888888888
Q ss_pred CcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCccccC
Q 006145 309 GKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (659)
Q Consensus 309 ~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N~l~~ 357 (659)
+..|..|..+++|+.|+|++|++++..+..+..+++++.+++++|.+.+
T Consensus 92 ~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 92 CIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp BCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred EeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 8877788888888888888888886555567778888888888887764
No 386
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.60 E-value=7.1e-18 Score=162.68 Aligned_cols=147 Identities=23% Similarity=0.305 Sum_probs=71.2
Q ss_pred CCCCcEEEcccCcCcccCCh------hccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCC
Q 006145 130 LSSLEILNMSSNFLNGAIPQ------ELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLE 203 (659)
Q Consensus 130 l~~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 203 (659)
...++.++++.|.++|.+|. .+..+++|++|+|++|.+++ +| .+..+++|+.|++++|.++ .+|..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 34444444444444444443 45555555555555555543 34 4445555555555555554 3444444445
Q ss_pred CCcEEeccccccccCCCCCCCCCcCCEEEcccCCCCCCCCCCCcccceEecCCCcCCccCc-hhccCCccccEEeccCcc
Q 006145 204 NLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIP-AEVSSYYQLQRLDLSSNR 282 (659)
Q Consensus 204 ~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~ 282 (659)
+|+.|+|++|++++. |.+..+++|++|++++|.++ +..+ ..+..+++|+.|++++|.
T Consensus 94 ~L~~L~L~~N~l~~l-~~~~~l~~L~~L~l~~N~i~---------------------~~~~~~~l~~l~~L~~L~l~~N~ 151 (198)
T 1ds9_A 94 TLEELWISYNQIASL-SGIEKLVNLRVLYMSNNKIT---------------------NWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp HCSEEEEEEEECCCH-HHHHHHHHSSEEEESEEECC---------------------CHHHHHHHTTTTTCSEEEECSCH
T ss_pred cCCEEECcCCcCCcC-CccccCCCCCEEECCCCcCC---------------------chhHHHHHhcCCCCCEEEecCCc
Confidence 555555555555442 23444444444444444332 1111 245555566666666666
Q ss_pred cccCCch----------hhcCCCcccEEe
Q 006145 283 FVGPFPQ----------ALLSLPSITYLN 301 (659)
Q Consensus 283 l~~~~p~----------~l~~l~~L~~L~ 301 (659)
+++.+|. .+..+++|+.||
T Consensus 152 l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld 180 (198)
T 1ds9_A 152 LYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp HHHHHHTTTTHHHHHHHHHHHCSSCSEEC
T ss_pred cccccccccchHHHHHHHHHhCCCcEEEC
Confidence 5554443 245555555554
No 387
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.59 E-value=3e-15 Score=156.21 Aligned_cols=236 Identities=16% Similarity=0.175 Sum_probs=158.7
Q ss_pred CCCCCEEEecCCCCc--CCCCcccCCCCCCcEEEcccCcCcccCChhccC--------CCCCcEEEeecCCCCCCCcccc
Q 006145 106 LPDLKVLRLVSLGLW--GPLSGKISRLSSLEILNMSSNFLNGAIPQELSI--------LTSLQTLILDENMLAGRVPDWL 175 (659)
Q Consensus 106 l~~L~~L~L~~n~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--------l~~L~~L~Ls~N~l~~~~p~~l 175 (659)
+++|+.|||++|++. ...+. .++.++.+.+..|.+ .+..|.+ +++|+.|+|.+ .++..-+.+|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~I---~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANFV---PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTEE---CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCccc---ccccccccccccccc---CHHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 677777888777776 22222 222244454444432 2344556 88888888888 7776666778
Q ss_pred CCCCCCCEEEccCCcCCccCCcccCCCCCCcEEecccccccc---CCC--CCCCCCcC----------------------
Q 006145 176 GSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYG---EVP--DFSGLTYL---------------------- 228 (659)
Q Consensus 176 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~---~~p--~~~~l~~L---------------------- 228 (659)
.++++|+.|++++|.+....+..|.++.++..+.+..+.... .+. .|.++..|
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~ 200 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQ 200 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCC
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccC
Confidence 888888888888888877777778887777777766532210 111 13333333
Q ss_pred ----CEEEcccCCCCCCC---CCCCcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCccc-EE
Q 006145 229 ----QVLDLENNALGPQF---PKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSIT-YL 300 (659)
Q Consensus 229 ----~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~-~L 300 (659)
..+.+.++-....+ ...+++|+.++|++|+++...+..|.++++|+.|+|.+| ++..-+.+|.++++|+ .+
T Consensus 201 ~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l 279 (329)
T 3sb4_A 201 PRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTL 279 (329)
T ss_dssp GGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEE
T ss_pred ccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEE
Confidence 33333332110000 001467888899988888777777888999999999887 7766677888888998 89
Q ss_pred eccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEc
Q 006145 301 NIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLY 350 (659)
Q Consensus 301 ~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~ 350 (659)
++.+ +++..-+..|..+++|+.+++++|+++..-+..+..+++|+.++.
T Consensus 280 ~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 280 ELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 8888 777666788888899999999888888666667778888877653
No 388
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.58 E-value=1.6e-15 Score=143.22 Aligned_cols=132 Identities=20% Similarity=0.241 Sum_probs=102.1
Q ss_pred cccCCCCCCEEEecCCCCcCCCCcccCCCC-CCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCC
Q 006145 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLS-SLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPI 180 (659)
Q Consensus 102 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 180 (659)
.+.++++|+.|+|++|+++. +|. +..+. +|++|+|++|.+++. ..+..+++|++|+|++|.+++..|..+..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 35567788888888888875 454 44444 888888888888865 56888888888888888888655555688888
Q ss_pred CCEEEccCCcCCccCCc--ccCCCCCCcEEeccccccccCCCC----CCCCCcCCEEEcccCCC
Q 006145 181 LAVLSLRNNMFNGTLPD--SFSYLENLRVLALSNNHFYGEVPD----FSGLTYLQVLDLENNAL 238 (659)
Q Consensus 181 L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~----~~~l~~L~~L~L~~N~l 238 (659)
|++|+|++|.++ .+|. .+..+++|+.|++++|.++..++. +..+++|++||+++|.+
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCH
Confidence 888888888886 4565 788888888888888888765443 77788888888888765
No 389
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=3e-15 Score=141.24 Aligned_cols=86 Identities=19% Similarity=0.128 Sum_probs=42.4
Q ss_pred cCCCCCCcEEEcccCcCcccCChhccCC-CCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCC
Q 006145 127 ISRLSSLEILNMSSNFLNGAIPQELSIL-TSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENL 205 (659)
Q Consensus 127 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 205 (659)
+.++++|+.|++++|.++. +|. +..+ ++|++|+|++|.+++. ..+..+++|++|+|++|.+++..|..|..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 4455566666666666652 333 2222 2555555555555543 344555555555555555553333333444455
Q ss_pred cEEeccccccc
Q 006145 206 RVLALSNNHFY 216 (659)
Q Consensus 206 ~~L~Ls~N~l~ 216 (659)
++|+|++|+++
T Consensus 91 ~~L~L~~N~i~ 101 (176)
T 1a9n_A 91 TELILTNNSLV 101 (176)
T ss_dssp CEEECCSCCCC
T ss_pred CEEECCCCcCC
Confidence 55555544443
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=2.1e-17 Score=159.38 Aligned_cols=137 Identities=23% Similarity=0.211 Sum_probs=73.9
Q ss_pred ccCCCCCcEEEeecCCCCCCCcc------ccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEeccccccccCCCCCCC
Q 006145 151 LSILTSLQTLILDENMLAGRVPD------WLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSG 224 (659)
Q Consensus 151 ~~~l~~L~~L~Ls~N~l~~~~p~------~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 224 (659)
+.....++.++++.|.+.|.+|. .+..+++|++|+|++|.+++ +| .+.++++|+.|++++|.++..+..+..
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~ 91 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDAV 91 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhhc
Confidence 44556677777777777766665 55555566666666555554 44 555555555555555555522211333
Q ss_pred CCcCCEEEcccCCCCCCCCCCCcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCc-hhhcCCCcccEEecc
Q 006145 225 LTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFP-QALLSLPSITYLNIA 303 (659)
Q Consensus 225 l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~l~ 303 (659)
+++|++|+|++|.+ ++ +| .+..+++|+.|++++|++++..+ ..+..+++|++|+++
T Consensus 92 ~~~L~~L~L~~N~l---------------------~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~ 148 (198)
T 1ds9_A 92 ADTLEELWISYNQI---------------------AS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLA 148 (198)
T ss_dssp HHHCSEEEEEEEEC---------------------CC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEEC
T ss_pred CCcCCEEECcCCcC---------------------Cc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEec
Confidence 34444444444433 22 23 35556666666666666654221 355566666666666
Q ss_pred CCcCCCcCC
Q 006145 304 DNKLTGKLF 312 (659)
Q Consensus 304 ~N~l~~~~p 312 (659)
+|.+++.+|
T Consensus 149 ~N~l~~~~~ 157 (198)
T 1ds9_A 149 GNPLYNDYK 157 (198)
T ss_dssp SCHHHHHHH
T ss_pred CCccccccc
Confidence 666655444
No 391
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=6.7e-14 Score=131.20 Aligned_cols=87 Identities=26% Similarity=0.297 Sum_probs=43.9
Q ss_pred CCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEec
Q 006145 131 SSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLAL 210 (659)
Q Consensus 131 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 210 (659)
++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|.++++|+.|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 44555555555555444444555555555555555555444444455555555555555555444444555555555555
Q ss_pred ccccccc
Q 006145 211 SNNHFYG 217 (659)
Q Consensus 211 s~N~l~~ 217 (659)
++|.++.
T Consensus 110 ~~N~~~c 116 (170)
T 3g39_A 110 LNNPWDC 116 (170)
T ss_dssp CSSCBCT
T ss_pred CCCCCCC
Confidence 5555443
No 392
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.50 E-value=1.1e-13 Score=129.68 Aligned_cols=109 Identities=19% Similarity=0.166 Sum_probs=88.2
Q ss_pred CCEEEcccCCCCCCCCCCCcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcC
Q 006145 228 LQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKL 307 (659)
Q Consensus 228 L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l 307 (659)
.+.+++++|.++..+....++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|++|+|++|+|
T Consensus 11 ~~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l 90 (170)
T 3g39_A 11 GTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL 90 (170)
T ss_dssp TTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCcc
Confidence 45666666666655444556777788888888888888888999999999999999987777788999999999999999
Q ss_pred CCcCCcCCCCCCCCCEEECcCCCCcccCC
Q 006145 308 TGKLFDDLSCNPELGFVDLSSNLLTGQLP 336 (659)
Q Consensus 308 ~~~~p~~~~~~~~L~~L~ls~N~l~g~ip 336 (659)
++..+..+..+++|+.|+|++|.++...+
T Consensus 91 ~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 91 KSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 98777778888999999999998886544
No 393
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.49 E-value=1.3e-13 Score=129.86 Aligned_cols=87 Identities=23% Similarity=0.279 Sum_probs=44.7
Q ss_pred CCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEec
Q 006145 131 SSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLAL 210 (659)
Q Consensus 131 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 210 (659)
++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 44555555555555444555555555555555555555433334455555555555555555433334555555555555
Q ss_pred ccccccc
Q 006145 211 SNNHFYG 217 (659)
Q Consensus 211 s~N~l~~ 217 (659)
++|.+..
T Consensus 113 ~~N~~~c 119 (174)
T 2r9u_A 113 YNNPWDC 119 (174)
T ss_dssp CSSCBCT
T ss_pred CCCCccc
Confidence 5555543
No 394
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.45 E-value=1.1e-13 Score=144.29 Aligned_cols=238 Identities=13% Similarity=0.066 Sum_probs=147.3
Q ss_pred CCEeEEEeCCCCCC--CCCCCCCcCCcccccccCCCCCCEEEecCC-----CCcCCCCcccCCCCCCcEEEcccCcCccc
Q 006145 74 ESITQLHIVGNKRA--PMLPLSFSMDSFVTTLVKLPDLKVLRLVSL-----GLWGPLSGKISRLSSLEILNMSSNFLNGA 146 (659)
Q Consensus 74 ~~v~~L~l~~~~~~--~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n-----~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 146 (659)
.+++.|||++|++. ...+. .++.++.+.+..| .|.+..+..+.++++|+.|+|++ .++..
T Consensus 49 ~~L~~LdLs~n~i~~~~~~~~------------~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I 115 (329)
T 3sb4_A 49 PSLKVLDISNAEIKMYSGKAG------------TYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNI 115 (329)
T ss_dssp TTCCEEEEEEEEECCEEESSS------------SSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEE
T ss_pred ccCeEEecCcceeEEecCccc------------cccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccch
Confidence 46899999998876 11111 1111233333333 22222222222277777777777 66655
Q ss_pred CChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCc----CCccCCcccCCCCCCc-EEec-----------
Q 006145 147 IPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM----FNGTLPDSFSYLENLR-VLAL----------- 210 (659)
Q Consensus 147 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~----l~~~~p~~~~~l~~L~-~L~L----------- 210 (659)
-+.+|.++++|+.|+|++|.+....+..|.++.++..+.+..+. ....-+..|.++.+|+ .+++
T Consensus 116 ~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~ 195 (329)
T 3sb4_A 116 EDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIM 195 (329)
T ss_dssp CTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHH
T ss_pred hHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHh
Confidence 55667777777777777777765556667666666666555422 1112222343444443 2222
Q ss_pred --------------cccccccCCCCC-CCCCcCCEEEcccCCCCCCCCCC---CcccceEecCCCcCCccCchhccCCcc
Q 006145 211 --------------SNNHFYGEVPDF-SGLTYLQVLDLENNALGPQFPKV---GKKLVTMILSKNKFRSAIPAEVSSYYQ 272 (659)
Q Consensus 211 --------------s~N~l~~~~p~~-~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~ 272 (659)
.++-.......+ ..+++|+.|+|++|+++...+.. +.+|+.+++.+| ++..-+..|.++++
T Consensus 196 ~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~ 274 (329)
T 3sb4_A 196 KAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGR 274 (329)
T ss_dssp HTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT
T ss_pred hcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChh
Confidence 221000000001 12677788888877776544443 467778888877 66666778999999
Q ss_pred cc-EEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEEC
Q 006145 273 LQ-RLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDL 326 (659)
Q Consensus 273 L~-~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l 326 (659)
|+ .+++.+ +++..-+.+|.++++|+.+++++|+++...+..|..+++|+.++.
T Consensus 275 L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 275 LAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred ccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 99 999988 777667789999999999999999999888889999999998863
No 395
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=4.1e-13 Score=126.29 Aligned_cols=106 Identities=18% Similarity=0.189 Sum_probs=80.0
Q ss_pred CEEEcccCCCCCCCCCCCcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCC
Q 006145 229 QVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLT 308 (659)
Q Consensus 229 ~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~ 308 (659)
+.+++++|.++..+....++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|++|+|++|+|+
T Consensus 15 ~~l~~~~n~l~~iP~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~ 94 (174)
T 2r9u_A 15 TLVNCQNIRLASVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLK 94 (174)
T ss_dssp SEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred cEEEeCCCCCCccCCCcCCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccc
Confidence 45666666665444444566777777777777777778888888888888888888766666788888888888888888
Q ss_pred CcCCcCCCCCCCCCEEECcCCCCccc
Q 006145 309 GKLFDDLSCNPELGFVDLSSNLLTGQ 334 (659)
Q Consensus 309 ~~~p~~~~~~~~L~~L~ls~N~l~g~ 334 (659)
+..+..+..+++|+.|+|++|.+...
T Consensus 95 ~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 95 SIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred eeCHHHhccccCCCEEEeCCCCcccc
Confidence 76666688888888888888888743
No 396
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.42 E-value=6.6e-12 Score=134.19 Aligned_cols=238 Identities=11% Similarity=0.053 Sum_probs=112.3
Q ss_pred CCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEc
Q 006145 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (659)
Q Consensus 107 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 186 (659)
..++.+.+.. .++..-..+|.+. +|+.++|..| ++..-..+|.++ +|+.+.|.. .+...-+..|.++++|+.++|
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 3444444432 2333334444443 4555555444 333333344442 455555543 343333345555555555555
Q ss_pred cCCcCCccCCcccCCCCCCcEEeccccccccCCC-CCCCCCcCCEEEcccCCCCCCCCCC--CcccceEecCCCcCCccC
Q 006145 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP-DFSGLTYLQVLDLENNALGPQFPKV--GKKLVTMILSKNKFRSAI 263 (659)
Q Consensus 187 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~~ 263 (659)
++|.++......|. ..+|+.+.|..+ ++.... .|.++++|+.+++..| ++..-... ..+|+.+.+ .|.++..-
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~~~L~~i~l-p~~i~~I~ 263 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRESGITTVKL-PNGVTNIA 263 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTTCCCSEEEE-ETTCCEEC
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCccccccccCCccEEEe-CCCccEEC
Confidence 55555533333333 345555555433 332222 1555555555555443 21111111 134555555 33344444
Q ss_pred chhccCCccccEEeccCcccc-----cCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChh
Q 006145 264 PAEVSSYYQLQRLDLSSNRFV-----GPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNC 338 (659)
Q Consensus 264 p~~~~~l~~L~~L~Ls~N~l~-----~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~ 338 (659)
+..|.++++|+.+++.+|.+. ...+..|.++++|+.++|. |.++..-...|..+++|+.+++.+| ++..-+..
T Consensus 264 ~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~a 341 (401)
T 4fdw_A 264 SRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSA 341 (401)
T ss_dssp TTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTS
T ss_pred hhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHh
Confidence 455666666666666655543 2334456666666666666 3355444455666666666666443 44233344
Q ss_pred hhCCCCCCEEEcCCcccc
Q 006145 339 LLAGSKNRVVLYARNCLA 356 (659)
Q Consensus 339 ~~~~~~l~~l~~~~N~l~ 356 (659)
+..+ +|+.+.+.+|.+.
T Consensus 342 F~~~-~L~~l~l~~n~~~ 358 (401)
T 4fdw_A 342 FNNT-GIKEVKVEGTTPP 358 (401)
T ss_dssp SSSS-CCCEEEECCSSCC
T ss_pred CCCC-CCCEEEEcCCCCc
Confidence 5555 6666666665443
No 397
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.35 E-value=1.9e-11 Score=130.55 Aligned_cols=243 Identities=11% Similarity=0.050 Sum_probs=185.2
Q ss_pred cccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCC
Q 006145 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPIL 181 (659)
Q Consensus 102 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 181 (659)
.+.+. +|+.+.|..+ ++..-..+|.+. +|+.+++.. .++..-+.+|.++++|+.++|+.|+++..-...|. .++|
T Consensus 131 aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L 205 (401)
T 4fdw_A 131 AFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGI 205 (401)
T ss_dssp TTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCC
T ss_pred hcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-eccc
Confidence 34454 7999998776 776677788884 799999986 67756677899999999999999999855555665 6899
Q ss_pred CEEEccCCcCCccCCcccCCCCCCcEEeccccccccCCCC-CCCCCcCCEEEcccCCCCCCCCC---CCcccceEecCCC
Q 006145 182 AVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPK---VGKKLVTMILSKN 257 (659)
Q Consensus 182 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~---~~~~L~~L~l~~N 257 (659)
+.+.|.++ ++..-...|.++++|+.+++..| ++..... |.+ .+|+.+.+.+ .++..... .+.+|+.+++.+|
T Consensus 206 ~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp~-~i~~I~~~aF~~c~~L~~l~l~~~ 281 (401)
T 4fdw_A 206 EEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLPN-GVTNIASRAFYYCPELAEVTTYGS 281 (401)
T ss_dssp SEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEET-TCCEECTTTTTTCTTCCEEEEESS
T ss_pred CEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeCC-CccEEChhHhhCCCCCCEEEeCCc
Confidence 99999854 77677778999999999999875 4433333 666 7899999954 44333222 3578999999888
Q ss_pred cCC-----ccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCc
Q 006145 258 KFR-----SAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT 332 (659)
Q Consensus 258 ~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~ 332 (659)
.+. ...+..|.++++|+.++|. |.++..-..+|.++.+|+.++|.+| ++..-...|..+ +|+.+++++|.+.
T Consensus 282 ~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~ 358 (401)
T 4fdw_A 282 TFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPP 358 (401)
T ss_dssp CCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCC
T ss_pred cccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCc
Confidence 775 3456779999999999999 4577666788999999999999665 776667788888 9999999999887
Q ss_pred ccCChhhhCCC-CCCEEEcCCcccc
Q 006145 333 GQLPNCLLAGS-KNRVVLYARNCLA 356 (659)
Q Consensus 333 g~ip~~~~~~~-~l~~l~~~~N~l~ 356 (659)
...+..+..++ .+..+.+..|.+.
T Consensus 359 ~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 359 QVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp BCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred ccccccccCCCCCccEEEeCHHHHH
Confidence 55555555553 5677887776543
No 398
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.33 E-value=3.1e-12 Score=134.18 Aligned_cols=66 Identities=23% Similarity=0.219 Sum_probs=28.3
Q ss_pred cCCCCCCcEEEccc-CcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCC
Q 006145 127 ISRLSSLEILNMSS-NFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFN 192 (659)
Q Consensus 127 ~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 192 (659)
|..+++|+.|+|++ |.|++..|..|.+|++|++|+|++|+|++..|..|.+|++|+.|+|++|+|+
T Consensus 27 l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 93 (347)
T 2ifg_A 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE 93 (347)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS
T ss_pred CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccc
Confidence 44444444444442 4444333344444444444444444444444444444444444444444444
No 399
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.31 E-value=5e-12 Score=132.58 Aligned_cols=102 Identities=25% Similarity=0.245 Sum_probs=89.0
Q ss_pred EEEcccC-cCcccCChhccCCCCCcEEEeec-CCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEeccc
Q 006145 135 ILNMSSN-FLNGAIPQELSILTSLQTLILDE-NMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSN 212 (659)
Q Consensus 135 ~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 212 (659)
.++++++ +|+ .+|. +..+++|++|+|++ |+|++..|..|++|++|+.|+|++|+|++..|..|.+|++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4688888 888 5788 99999999999996 999988888999999999999999999999999999999999999999
Q ss_pred cccccCCCC-CCCCCcCCEEEcccCCCC
Q 006145 213 NHFYGEVPD-FSGLTYLQVLDLENNALG 239 (659)
Q Consensus 213 N~l~~~~p~-~~~l~~L~~L~L~~N~l~ 239 (659)
|+|++.++. |..++ |+.|+|.+|.+.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 999988776 44444 888888888775
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.26 E-value=4.4e-14 Score=149.59 Aligned_cols=110 Identities=19% Similarity=0.162 Sum_probs=52.7
Q ss_pred CCCCEEEecCCCCcCCCCcccCC-----CCCCcEEEcccCcCcccCChhc-cCCCCCcEEEeecCCCCCCCcccc-----
Q 006145 107 PDLKVLRLVSLGLWGPLSGKISR-----LSSLEILNMSSNFLNGAIPQEL-SILTSLQTLILDENMLAGRVPDWL----- 175 (659)
Q Consensus 107 ~~L~~L~L~~n~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~l----- 175 (659)
+.|+.|+|++|.++......+.. .++|+.|+|++|.++..-...+ ..+++|+.|+|++|.++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 45666666666665433322222 2566666666666653322222 234456666666666543322222
Q ss_pred CCCCCCCEEEccCCcCCcc----CCcccCCCCCCcEEeccccccc
Q 006145 176 GSLPILAVLSLRNNMFNGT----LPDSFSYLENLRVLALSNNHFY 216 (659)
Q Consensus 176 ~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 216 (659)
...++|+.|+|++|.|+.. ++..+..+++|++|+|++|.++
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~ 196 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLG 196 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCC
Confidence 2344555555555555421 2222334444444444444443
No 401
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.24 E-value=2.1e-11 Score=122.41 Aligned_cols=148 Identities=9% Similarity=-0.038 Sum_probs=113.5
Q ss_pred HHhhcCCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCCC-CCCccceeeeeeeccccCCC
Q 006145 473 EEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDDSS 551 (659)
Q Consensus 473 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~~ 551 (659)
......|.....++.|+.+.||++... +..+++|+..........++.+|+++++.+. |..+.++++++..
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~------- 81 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERH------- 81 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE-------
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEec-------
Confidence 334456777777888888999999854 6889999987543233456899999999885 6778889988865
Q ss_pred CceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCC-----------------------------
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG----------------------------- 602 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~----------------------------- 602 (659)
.+..|+||||++|.+|.+.+.. ......++.+++++++.||+.
T Consensus 82 ~~~~~lv~e~i~G~~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (263)
T 3tm0_A 82 DGWSNLLMSEADGVLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADV 153 (263)
T ss_dssp TTEEEEEEECCSSEEHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCC
T ss_pred CCceEEEEEecCCeehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccc
Confidence 4568999999999999876421 112347888999999999981
Q ss_pred ---------------------------CCCCccccCCCCCceeecCCcceEEccCcccccc
Q 006145 603 ---------------------------IVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (659)
Q Consensus 603 ---------------------------~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~ 636 (659)
..+.++|+|+++.||+++++..+.|.||+.+...
T Consensus 154 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~g 214 (263)
T 3tm0_A 154 DCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRA 214 (263)
T ss_dssp SGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred ccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcccC
Confidence 0145899999999999987766789999988544
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.21 E-value=1.6e-13 Score=145.34 Aligned_cols=73 Identities=19% Similarity=0.141 Sum_probs=39.2
Q ss_pred cCCccccEEeccCccccc----CCchhhcCCCcccEEeccCCcCCCc----CCcCCCCCCCCCEEECcCCCCcccCChhh
Q 006145 268 SSYYQLQRLDLSSNRFVG----PFPQALLSLPSITYLNIADNKLTGK----LFDDLSCNPELGFVDLSSNLLTGQLPNCL 339 (659)
Q Consensus 268 ~~l~~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~l~~N~l~~~----~p~~~~~~~~L~~L~ls~N~l~g~ip~~~ 339 (659)
...++|++|+|++|.|+. .++..+...++|+.|+|++|.++.. ++..+...+.|+.|||++|.|+..-...+
T Consensus 180 ~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 180 AGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp HTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred hcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 444555555555555542 1234455555666666666666542 22233345667777777777765444444
Q ss_pred h
Q 006145 340 L 340 (659)
Q Consensus 340 ~ 340 (659)
.
T Consensus 260 ~ 260 (372)
T 3un9_A 260 R 260 (372)
T ss_dssp H
T ss_pred H
Confidence 3
No 403
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.17 E-value=4.9e-11 Score=119.32 Aligned_cols=131 Identities=15% Similarity=0.102 Sum_probs=97.1
Q ss_pred ccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCC--ccceeeeeeeccccCCCCceeEEEEeccC
Q 006145 486 GEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRH--LVSALGHCFECYFDDSSVSRIFLIFEYVP 563 (659)
Q Consensus 486 g~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~n--iv~l~g~~~~~~~~~~~~~~~~lV~Ey~~ 563 (659)
+.|..+.||++...+|..+++|..... ....+.+|+++++.+++.+ +.+++++... .+..++||||++
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~-------~~~~~~v~e~i~ 98 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTE-------AGRDWLLLGEVP 98 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEEC-------SSCEEEEEECCS
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccC-------CCCCEEEEEecC
Confidence 455569999998777888999997543 2356889999999886545 4457776653 345799999999
Q ss_pred CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCC----------------------------------------
Q 006145 564 NGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI---------------------------------------- 603 (659)
Q Consensus 564 ~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~---------------------------------------- 603 (659)
|.++. ... .+ ...++.++++.|+.||+..
T Consensus 99 G~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (264)
T 1nd4_A 99 GQDLL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAP 167 (264)
T ss_dssp SEETT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCH
T ss_pred CcccC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccH
Confidence 98884 221 11 2367778888888888741
Q ss_pred ---------------CCCccccCCCCCceeecCCcceEEccCccccccc
Q 006145 604 ---------------VPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (659)
Q Consensus 604 ---------------~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~ 637 (659)
.+.++|+|++|.||+++++..+.|.|||.+....
T Consensus 168 ~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g~ 216 (264)
T 1nd4_A 168 AELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVAD 216 (264)
T ss_dssp HHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEEE
T ss_pred HHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccCC
Confidence 1239999999999999987777899999986553
No 404
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.04 E-value=4.7e-10 Score=118.15 Aligned_cols=146 Identities=12% Similarity=0.189 Sum_probs=107.6
Q ss_pred CceeccCcCceEEEEEecCCcEEEEEEec--ccCC-CchHHHHHHHHHHhCCC--CCCccceeeeeeeccccCCCCceeE
Q 006145 482 SAFMGEGSQGQMYRGRLKNGTFVAIRCLK--MKKC-HSTRNFMHHIELISKLR--HRHLVSALGHCFECYFDDSSVSRIF 556 (659)
Q Consensus 482 ~~~ig~G~~g~Vy~~~~~~g~~vavK~l~--~~~~-~~~~~~~~Ei~~l~~l~--H~niv~l~g~~~~~~~~~~~~~~~~ 556 (659)
.+.++.|.++.||+....+ ..+++|+.. .... ....++.+|+++++.++ +..+.++++++.+.. ..+..+
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~----~~g~~~ 117 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDES----VIGRAF 117 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTT----TTSSCE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCC----ccCCeE
Confidence 4678999999999998764 578888775 3321 22356889999999887 456788888876521 124579
Q ss_pred EEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCC---------------------------------
Q 006145 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI--------------------------------- 603 (659)
Q Consensus 557 lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--------------------------------- 603 (659)
+||||++|..+.+... ..++..++..++.++++.|+.||+..
T Consensus 118 ~vme~v~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQSL-----PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE 192 (359)
T ss_dssp EEEECCCCBCCCCTTC-----TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred EEEEecCCeecCCCcc-----ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence 9999999988864221 24778889999999999999999720
Q ss_pred ----------------------CCCccccCCCCCceeecCCcc--eEEccCccccccc
Q 006145 604 ----------------------VPGVFSNNLKITDILLDQNLV--AKISSYNLPLLAE 637 (659)
Q Consensus 604 ----------------------~~~iiHrDlk~~NILld~~~~--~kl~DFGla~~~~ 637 (659)
.+.++|+|+++.||++++++. +.|.||+.+...+
T Consensus 193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g~ 250 (359)
T 3dxp_A 193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGH 250 (359)
T ss_dssp CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEEC
T ss_pred CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccCC
Confidence 257999999999999997753 6899999987554
No 405
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.93 E-value=3.4e-10 Score=118.85 Aligned_cols=40 Identities=18% Similarity=0.331 Sum_probs=21.2
Q ss_pred CccccEEeccCcccccC----CchhhcCCCcccEEeccCCcCCC
Q 006145 270 YYQLQRLDLSSNRFVGP----FPQALLSLPSITYLNIADNKLTG 309 (659)
Q Consensus 270 l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~l~~N~l~~ 309 (659)
+++|+.|+|+.|.+.+. ++..+..+++|+.|+|++|.++.
T Consensus 278 ~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 278 LPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp GGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred CCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 45566666666655542 22223345566666666665553
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.90 E-value=2.2e-10 Score=120.27 Aligned_cols=85 Identities=18% Similarity=0.263 Sum_probs=56.2
Q ss_pred CCccccEEeccCcccccCCchhhc---CCCcccEEeccCCcCCCc----CCcCCCCCCCCCEEECcCCCCcccCChhhhC
Q 006145 269 SYYQLQRLDLSSNRFVGPFPQALL---SLPSITYLNIADNKLTGK----LFDDLSCNPELGFVDLSSNLLTGQLPNCLLA 341 (659)
Q Consensus 269 ~l~~L~~L~Ls~N~l~~~~p~~l~---~l~~L~~L~l~~N~l~~~----~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~ 341 (659)
.+++|+.|+|++|.+....+..+. .+++|++|+|+.|.+++. ++..+..+++|+.|+|++|.++...-..+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 467888888888887654443333 578899999999888763 3334456788999999988887543333332
Q ss_pred CCCCCEEEcCCcc
Q 006145 342 GSKNRVVLYARNC 354 (659)
Q Consensus 342 ~~~l~~l~~~~N~ 354 (659)
.- ...++++.|.
T Consensus 330 al-g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL-PMKIDVSDSQ 341 (362)
T ss_dssp HC-CSEEECCSBC
T ss_pred Hc-CCEEEecCCc
Confidence 11 3456777665
No 407
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.88 E-value=2.9e-08 Score=105.81 Aligned_cols=220 Identities=14% Similarity=0.065 Sum_probs=114.1
Q ss_pred CcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCC
Q 006145 124 SGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLE 203 (659)
Q Consensus 124 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 203 (659)
..+|.++++|+.+.+..+.. ..-...|.++++|+.+++..| +...-...|.++..|+.+.+..+... +.+.+....
T Consensus 155 ~~aF~~c~~L~~i~l~~~~~-~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~ 230 (394)
T 4fs7_A 155 DEAFATCESLEYVSLPDSME-TLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKT 230 (394)
T ss_dssp TTTTTTCTTCCEEECCTTCC-EECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTC
T ss_pred hhhhcccCCCcEEecCCccc-eeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccC
Confidence 44567777777777765532 234455677777777777655 33333456666666766666554332 222333445
Q ss_pred CCcEEeccccccccCCCCCCCCCcCCEEEcccCCCC--CCCCCCCcccceEecCCCcCCccCchhccCCccccEEeccCc
Q 006145 204 NLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALG--PQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSN 281 (659)
Q Consensus 204 ~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~--~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N 281 (659)
+|+.+.+..+.-.-....|.++..|+.+.+..+... .........++.+....+.+ ....|..+.+|+.+.+..+
T Consensus 231 ~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~ 307 (394)
T 4fs7_A 231 GVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS 307 (394)
T ss_dssp CCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT
T ss_pred CCceEEECCCceecccccccccccceeEEcCCCcceeeccccccccccceeccCceee---ccccccccccccccccccc
Confidence 566665543321111112555666666666554321 11111233444444443322 1234555666666666543
Q ss_pred ccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCc
Q 006145 282 RFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARN 353 (659)
Q Consensus 282 ~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N 353 (659)
++..-..+|.++.+|+.++|.++ ++..-...|..+.+|+.+++..| ++..-..++..+.+|+.+.+..+
T Consensus 308 -i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 308 -VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp -CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred -cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 44333455666666666666533 44333455666666666666555 44223345556666666665443
No 408
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.84 E-value=4.8e-08 Score=104.07 Aligned_cols=242 Identities=13% Similarity=0.064 Sum_probs=140.5
Q ss_pred cccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCC---------------
Q 006145 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENM--------------- 166 (659)
Q Consensus 102 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~--------------- 166 (659)
.+.++.+|+.+.|.. .++..-..+|.++++|+.++|..+ ++..-...|.++++|+.+.+..+-
T Consensus 66 AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~~ 143 (394)
T 4fs7_A 66 AFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFKE 143 (394)
T ss_dssp TTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCSE
T ss_pred HhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeecccccc
Confidence 355666777777753 355555566777777777777544 443334456666666655544321
Q ss_pred ------CCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCcEEeccccccccCCC-CCCCCCcCCEEEcccCCCC
Q 006145 167 ------LAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP-DFSGLTYLQVLDLENNALG 239 (659)
Q Consensus 167 ------l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~L~~N~l~ 239 (659)
....-...|.++++|+.+.+.++. ...-...|.++.+|+.+++..| ++.... .|.++..|+.+.+..+...
T Consensus 144 ~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~ 221 (394)
T 4fs7_A 144 ITIPEGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY 221 (394)
T ss_dssp EECCTTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE
T ss_pred cccCccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE
Confidence 111112346667777777776543 3244455667777777777655 221111 2555555555554433211
Q ss_pred -CC-----------------------CCCCCcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCC
Q 006145 240 -PQ-----------------------FPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLP 295 (659)
Q Consensus 240 -~~-----------------------~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 295 (659)
+. ......+|+.+.+..+.. ......|..+..++.+....+.+. ...|..+.
T Consensus 222 i~~~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~-~i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~ 297 (394)
T 4fs7_A 222 LGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKL-RIGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCS 297 (394)
T ss_dssp ECTTTTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTC-EECSCTTTTCTTCCEEEECSSEEC---TTTTTTCT
T ss_pred eehhhcccCCCceEEECCCceecccccccccccceeEEcCCCcc-eeeccccccccccceeccCceeec---cccccccc
Confidence 00 011123455555544432 233345566666666666555432 34677889
Q ss_pred cccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCc
Q 006145 296 SITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARN 353 (659)
Q Consensus 296 ~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N 353 (659)
+|+.+.+.++ ++..-...|..+.+|+.+++.++ ++..-..++.++.+|+.+.+..|
T Consensus 298 ~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 298 SLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp TCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred cccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 9999999765 66555667889999999999755 66333567888899999988766
No 409
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.71 E-value=1.2e-10 Score=116.37 Aligned_cols=104 Identities=19% Similarity=0.212 Sum_probs=63.6
Q ss_pred cCCCCCCcE--EEcccCcCc---ccCChhccCCCCCcEEEeecCCCCC--CCccccCCCCCCCEEEccCCcCCccCCccc
Q 006145 127 ISRLSSLEI--LNMSSNFLN---GAIPQELSILTSLQTLILDENMLAG--RVPDWLGSLPILAVLSLRNNMFNGTLPDSF 199 (659)
Q Consensus 127 ~~~l~~L~~--L~Ls~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~ 199 (659)
|...+.|+. ++++.|... +.++-...++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 334444554 566666432 2222223467777777777777776 4456666777777777777777754 233
Q ss_pred CCCC--CCcEEeccccccccCCCC--------CCCCCcCCEEE
Q 006145 200 SYLE--NLRVLALSNNHFYGEVPD--------FSGLTYLQVLD 232 (659)
Q Consensus 200 ~~l~--~L~~L~Ls~N~l~~~~p~--------~~~l~~L~~L~ 232 (659)
..++ +|++|+|++|.+.+.+|+ +..+++|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 3333 777777777777765552 45566676665
No 410
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.56 E-value=5.6e-06 Score=87.94 Aligned_cols=85 Identities=15% Similarity=0.169 Sum_probs=44.2
Q ss_pred hccCCccccEEeccCcccccCCchhhcCCCcccEEeccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCC
Q 006145 266 EVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKN 345 (659)
Q Consensus 266 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l 345 (659)
.|.++++|+.+.+. +.++..-...|.++.+|+.++|..+ ++..-...|..+.+|+.+.+..+ ++..-...+.++.+|
T Consensus 283 aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L 359 (394)
T 4gt6_A 283 AFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTAL 359 (394)
T ss_dssp TTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTC
T ss_pred ccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCC
Confidence 34555555555554 3333333445556666666666543 44333445666666666666443 432223345556666
Q ss_pred CEEEcCCc
Q 006145 346 RVVLYARN 353 (659)
Q Consensus 346 ~~l~~~~N 353 (659)
+.+.+.+|
T Consensus 360 ~~i~~~~~ 367 (394)
T 4gt6_A 360 NNIEYSGS 367 (394)
T ss_dssp CEEEESSC
T ss_pred CEEEECCc
Confidence 66666554
No 411
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.53 E-value=5.8e-07 Score=91.20 Aligned_cols=142 Identities=17% Similarity=0.105 Sum_probs=94.5
Q ss_pred CceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCC---CccceeeeeeeccccCCCCceeEEE
Q 006145 482 SAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHR---HLVSALGHCFECYFDDSSVSRIFLI 558 (659)
Q Consensus 482 ~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~---niv~l~g~~~~~~~~~~~~~~~~lV 558 (659)
.+.++.|.++.||+++..+|+.++||+...........|.+|++.|+.+++. .+.+++++. ..++|
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~-----------~~~lv 88 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD-----------DRTLA 88 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE-----------TTEEE
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec-----------CcEEE
Confidence 4678999999999999888999999997543333346799999999999875 577777643 14899
Q ss_pred EeccCCCChhh-----------hhcCCCCC------------------CCCCHHHHH---HH-----------------H
Q 006145 559 FEYVPNGTLRS-----------WISEGHAH------------------QSLTWTQRI---SA-----------------A 589 (659)
Q Consensus 559 ~Ey~~~GsL~~-----------~l~~~~~~------------------~~l~~~~~~---~i-----------------~ 589 (659)
|||++++++.. .||..... -.-+|.... ++ .
T Consensus 89 me~l~g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~ 168 (288)
T 3d1u_A 89 MEWVDERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDV 168 (288)
T ss_dssp EECCCCCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHH
T ss_pred EEecccCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 99999987531 12321100 012454321 10 1
Q ss_pred HHHHHHhhhhc----CCCCCCccccCCCCCceeecCCcceEEccCcccccc
Q 006145 590 IGVAKGIQFLH----TGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (659)
Q Consensus 590 ~~ia~~L~yLH----~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~ 636 (659)
..+-+.++.+. ....|.++|+|+.+.||+++++ .+.|.|| .+...
T Consensus 169 ~~~~~l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~~g 217 (288)
T 3d1u_A 169 RLVEKVLDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAHGG 217 (288)
T ss_dssp HHHHHHHHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCEEE
T ss_pred HHHHHHHHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcCCC
Confidence 11112223332 2346789999999999999984 5889999 66433
No 412
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.51 E-value=1.7e-08 Score=95.55 Aligned_cols=114 Identities=14% Similarity=0.206 Sum_probs=67.2
Q ss_pred cccCCCCCCEEEecCC-CCcCC----CCcccCCCCCCcEEEcccCcCccc----CChhccCCCCCcEEEeecCCCCCC--
Q 006145 102 TLVKLPDLKVLRLVSL-GLWGP----LSGKISRLSSLEILNMSSNFLNGA----IPQELSILTSLQTLILDENMLAGR-- 170 (659)
Q Consensus 102 ~l~~l~~L~~L~L~~n-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~-- 170 (659)
.+...+.|++|+|++| .+... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|...
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 4556777777777777 66532 334455667777777777777532 334445556677777777776532
Q ss_pred --CccccCCCCCCCEEEc--cCCcCCcc----CCcccCCCCCCcEEecccccc
Q 006145 171 --VPDWLGSLPILAVLSL--RNNMFNGT----LPDSFSYLENLRVLALSNNHF 215 (659)
Q Consensus 171 --~p~~l~~l~~L~~L~L--~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l 215 (659)
+...+...++|++|+| ++|.+... +...+...++|++|+|++|.+
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 3344555566666666 55666532 222333445566666665554
No 413
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.50 E-value=6.6e-09 Score=103.67 Aligned_cols=80 Identities=25% Similarity=0.218 Sum_probs=66.3
Q ss_pred CCCCCCcEEEcccCcCcc--cCChhccCCCCCcEEEeecCCCCCCCccccCCCC--CCCEEEccCCcCCccCCc------
Q 006145 128 SRLSSLEILNMSSNFLNG--AIPQELSILTSLQTLILDENMLAGRVPDWLGSLP--ILAVLSLRNNMFNGTLPD------ 197 (659)
Q Consensus 128 ~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~--~L~~L~L~~N~l~~~~p~------ 197 (659)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+|+
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 568899999999999998 5667788999999999999999875 3344444 899999999999987773
Q ss_pred -ccCCCCCCcEEe
Q 006145 198 -SFSYLENLRVLA 209 (659)
Q Consensus 198 -~~~~l~~L~~L~ 209 (659)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 367889999887
No 414
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.50 E-value=4.3e-07 Score=93.71 Aligned_cols=139 Identities=12% Similarity=0.173 Sum_probs=99.9
Q ss_pred CCCCCceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCCCC----CCccceeeeeeeccccCCCCc
Q 006145 478 NFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRH----RHLVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 478 ~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H----~niv~l~g~~~~~~~~~~~~~ 553 (659)
.....+.++.|....||+. |..+++|+..... ....+.+|.+++..+.+ ..+.+++++ +
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~-----------~ 100 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ-----------S 100 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE-----------C
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec-----------C
Confidence 4555678999999999998 6678888764321 23468899998888865 223444433 1
Q ss_pred eeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCC------------------------------
Q 006145 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI------------------------------ 603 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~------------------------------ 603 (659)
..++||||++|.++.+... ..++..++..++.++++.++.||+.-
T Consensus 101 ~~~lvme~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (320)
T 3r70_A 101 DRFNIMKYIKGERITYEQY-----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISIL 175 (320)
T ss_dssp SSCEEEECCCCBCCCHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHH
T ss_pred CcEEEEeecCCcccccccc-----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHH
Confidence 2589999999988874332 13566677777888888888877431
Q ss_pred ------------------------------CCCccccCCCCCceeecCCcceEEccCcccccccc
Q 006145 604 ------------------------------VPGVFSNNLKITDILLDQNLVAKISSYNLPLLAEN 638 (659)
Q Consensus 604 ------------------------------~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~ 638 (659)
.+.++|+|++|.||+++++..+.|.||+.+...+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~~ 240 (320)
T 3r70_A 176 EKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGDP 240 (320)
T ss_dssp HHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEECG
T ss_pred hhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCCH
Confidence 12459999999999999877779999999865543
No 415
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.43 E-value=3.7e-07 Score=93.46 Aligned_cols=141 Identities=16% Similarity=0.229 Sum_probs=98.1
Q ss_pred CceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCCC-CCC--ccceeeeeeeccccCCCCceeEEE
Q 006145 482 SAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HRH--LVSALGHCFECYFDDSSVSRIFLI 558 (659)
Q Consensus 482 ~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~-H~n--iv~l~g~~~~~~~~~~~~~~~~lV 558 (659)
.+.++.|....||+.. ..+++|+-... .....+.+|+++|+.+. +.. +.++++++... ......|+|
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~----~~~~~~~~v 94 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPS----ETYQMSFAG 94 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCC----SSCSCSCEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCC----CCCCcceEE
Confidence 3568899999999863 45888886432 23467899999998874 333 33444333210 011235899
Q ss_pred EeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCC------------------------------------
Q 006145 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG------------------------------------ 602 (659)
Q Consensus 559 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~------------------------------------ 602 (659)
|||++|.++.+.... .++..++..++.++++.++.||+.
T Consensus 95 m~~i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
T 3sg8_A 95 FTKIKGVPLTPLLLN-----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQ 169 (304)
T ss_dssp EECCCCEECCHHHHH-----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHH
T ss_pred EcccCCeECCccccc-----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCccc
Confidence 999999888753321 366777788888888888888851
Q ss_pred -------------------CCCCccccCCCCCceeecC--CcceEEccCccccccc
Q 006145 603 -------------------IVPGVFSNNLKITDILLDQ--NLVAKISSYNLPLLAE 637 (659)
Q Consensus 603 -------------------~~~~iiHrDlk~~NILld~--~~~~kl~DFGla~~~~ 637 (659)
..+.++|+|+++.||++++ ...+.|.||+.+...+
T Consensus 170 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~ 225 (304)
T 3sg8_A 170 MKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISD 225 (304)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEEC
T ss_pred HHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCC
Confidence 1246899999999999998 5668899999986543
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.38 E-value=3.5e-08 Score=93.31 Aligned_cols=116 Identities=15% Similarity=0.117 Sum_probs=78.8
Q ss_pred CCcccCCCCCCcEEEcccC-cCccc----CChhccCCCCCcEEEeecCCCCCC----CccccCCCCCCCEEEccCCcCCc
Q 006145 123 LSGKISRLSSLEILNMSSN-FLNGA----IPQELSILTSLQTLILDENMLAGR----VPDWLGSLPILAVLSLRNNMFNG 193 (659)
Q Consensus 123 ~p~~~~~l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~ 193 (659)
+...+...++|+.|+|++| .+... +...+...++|++|+|++|.+... +...+...++|++|+|++|.|..
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3445677889999999998 88632 445567778899999999888642 23445556778888888888874
Q ss_pred c----CCcccCCCCCCcEEec--cccccccCC-----CCCCCCCcCCEEEcccCCC
Q 006145 194 T----LPDSFSYLENLRVLAL--SNNHFYGEV-----PDFSGLTYLQVLDLENNAL 238 (659)
Q Consensus 194 ~----~p~~~~~l~~L~~L~L--s~N~l~~~~-----p~~~~l~~L~~L~L~~N~l 238 (659)
. +...+...++|++|+| ++|.+...- ..+...++|++|+|++|.+
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 3 3455666777888888 677775421 1144456677777666654
No 417
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.35 E-value=2.5e-05 Score=82.89 Aligned_cols=244 Identities=11% Similarity=0.091 Sum_probs=134.1
Q ss_pred ccCCC-CCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCc---CcccCChhccCCCCCcEEEeecCCCCCCCccccCCC
Q 006145 103 LVKLP-DLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNF---LNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSL 178 (659)
Q Consensus 103 l~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 178 (659)
+.++. .|+.+.+..+ ++..-..+|.++++|+.+.++.|. ++..-..+|.++.+|+.+.+..+ ++..-...|..+
T Consensus 59 F~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c 136 (394)
T 4gt6_A 59 FCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHC 136 (394)
T ss_dssp TTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTC
T ss_pred ccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhh
Confidence 34442 4666666543 555555667777777777766653 43333445666666666665443 333334456666
Q ss_pred CCCCEEEccCCcCCccCCcccCCCCCCcEEeccccc----------------------cccCCCCCCCCCcCCEEEcccC
Q 006145 179 PILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNH----------------------FYGEVPDFSGLTYLQVLDLENN 236 (659)
Q Consensus 179 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~----------------------l~~~~p~~~~l~~L~~L~L~~N 236 (659)
.+|+.+.+..+ +...-...|.++.+|+.+.+..+- ..-....|.++.+|.......+
T Consensus 137 ~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~~~~I~~~aF~~~~l~~i~ip~~~~~i~~~af~~c~~l~~~~~~~~ 215 (394)
T 4gt6_A 137 EELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDSVTAIEERAFTGTALTQIHIPAKVTRIGTNAFSECFALSTITSDSE 215 (394)
T ss_dssp TTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTTCCEECTTTTTTCCCSEEEECTTCCEECTTTTTTCTTCCEEEECCS
T ss_pred cccccccccce-eeeecccceecccccccccccceeeEeccccccccceeEEEECCcccccccchhhhccccceeccccc
Confidence 66666666543 232334455666666666665431 1111112334444444443332
Q ss_pred CCCCCCCCC----------------CcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEE
Q 006145 237 ALGPQFPKV----------------GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYL 300 (659)
Q Consensus 237 ~l~~~~~~~----------------~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 300 (659)
.....--.. ...+..+.+. +.++..-...|.++.+|+.+.+.++..+ .-...|.++++|+.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i 293 (394)
T 4gt6_A 216 SYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDI 293 (394)
T ss_dssp SSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEE
T ss_pred ccccccceeecccccccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccce-ecCcccccccccccc
Confidence 221100000 0011112111 1222222345778888999988765443 445678888999999
Q ss_pred eccCCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCc
Q 006145 301 NIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARN 353 (659)
Q Consensus 301 ~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N 353 (659)
.+. +.++..-...|..+.+|+.+++..+ ++..-..++..+.+|+.+.+..+
T Consensus 294 ~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s 344 (394)
T 4gt6_A 294 EFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS 344 (394)
T ss_dssp ECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT
T ss_pred cCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc
Confidence 986 4566555567888899999999765 55333456777888888887544
No 418
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.25 E-value=3.7e-06 Score=84.25 Aligned_cols=137 Identities=13% Similarity=0.055 Sum_probs=93.6
Q ss_pred eeccCcCc-eEEEEEecC-CcEEEEEEecccCCCchHHHHHHHHHHhCCC-CCCccceeeeeeeccccCCCCceeEEEEe
Q 006145 484 FMGEGSQG-QMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDDSSVSRIFLIFE 560 (659)
Q Consensus 484 ~ig~G~~g-~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~~~~~~~lV~E 560 (659)
.+..|..| .||+..... +..+.+|+-... ...++.+|.+.|+.+. +--+.++++++.+ .+..++|||
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~-------~~~~~lvme 100 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRT-------PDDAWLLTT 100 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEE-------TTEEEEEEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEE-------CCeEEEEEE
Confidence 44556555 689987654 667889986532 3457889999988774 3346677887765 456799999
Q ss_pred ccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCC--------------------------------------
Q 006145 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG-------------------------------------- 602 (659)
Q Consensus 561 y~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-------------------------------------- 602 (659)
++++.++.+..... ...+..++.++++.|+-||..
T Consensus 101 ~l~G~~~~~~~~~~-------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (272)
T 4gkh_A 101 AIPGKTAFQVLEEY-------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNG 173 (272)
T ss_dssp CCCSEEHHHHHHHC-------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTT
T ss_pred eeCCccccccccCC-------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccc
Confidence 99998876654321 112234455555555555531
Q ss_pred -----------------CCCCccccCCCCCceeecCCcceEEccCccccccc
Q 006145 603 -----------------IVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (659)
Q Consensus 603 -----------------~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~ 637 (659)
..+.++|+|+.+.||++++++.+-|.||+.+...+
T Consensus 174 ~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~gd 225 (272)
T 4gkh_A 174 WPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIAD 225 (272)
T ss_dssp CCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEEE
T ss_pred hHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccCC
Confidence 11247999999999999988777899999986553
No 419
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.24 E-value=3.7e-06 Score=86.07 Aligned_cols=139 Identities=14% Similarity=0.074 Sum_probs=92.8
Q ss_pred ceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCC---CccceeeeeeeccccCCCCceeEEEE
Q 006145 483 AFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHR---HLVSALGHCFECYFDDSSVSRIFLIF 559 (659)
Q Consensus 483 ~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~---niv~l~g~~~~~~~~~~~~~~~~lV~ 559 (659)
+.++.|....||+. |..+++|+-... .....+.+|+++|+.+.+. .+.+++.++.. ..+..++||
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~~--~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~------~~g~~~~v~ 92 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKSQ--QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKR------SDGNPFVGY 92 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEEC------TTSCEEEEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCCc--hHHHHHHHHHHHHHHHHhcCCCCCCCeEeeccc------CCCceEEEE
Confidence 56778888899987 566888874321 2245789999999998753 35556655542 134568999
Q ss_pred eccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCC-------------------------------------
Q 006145 560 EYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG------------------------------------- 602 (659)
Q Consensus 560 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~------------------------------------- 602 (659)
||++|.++.+..-. .++..++..++.++++.|+.||+.
T Consensus 93 e~i~G~~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~ 167 (306)
T 3tdw_A 93 RKVQGQILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDES 167 (306)
T ss_dssp ECCCSEECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHH
T ss_pred eccCCeECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchh
Confidence 99999888653211 234444455555555555555531
Q ss_pred --------------------CCCCccccCCCCCceeecC---Ccc-eEEccCcccccccc
Q 006145 603 --------------------IVPGVFSNNLKITDILLDQ---NLV-AKISSYNLPLLAEN 638 (659)
Q Consensus 603 --------------------~~~~iiHrDlk~~NILld~---~~~-~kl~DFGla~~~~~ 638 (659)
..+.++|+|+++.||++++ ++. ..|.||+.+...+.
T Consensus 168 ~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd~ 227 (306)
T 3tdw_A 168 LRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDP 227 (306)
T ss_dssp HHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEECG
T ss_pred hHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCCH
Confidence 2345799999999999997 455 58999998865543
No 420
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.23 E-value=7.9e-05 Score=78.43 Aligned_cols=240 Identities=11% Similarity=-0.029 Sum_probs=122.2
Q ss_pred cccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCC
Q 006145 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPIL 181 (659)
Q Consensus 102 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 181 (659)
.+.++.+|+.++|..+ ++..-..+|.++ +|+.+.+..+ ++..-..+|.+ .+|+.+.+..+- ...-...|.+. +|
T Consensus 64 aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp~~~-~~i~~~~F~~~-~l 137 (379)
T 4h09_A 64 NFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEFPGAT-TEIGNYIFYNS-SV 137 (379)
T ss_dssp TTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEECCTTC-CEECTTTTTTC-CC
T ss_pred HhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccCCCcc-ccccccccccc-ee
Confidence 4567778888887643 555555667666 5666666543 33233334444 367777776542 21222333332 45
Q ss_pred CEEEccCCcCCccCCcccCCCCCCcEEeccccccccC------------------------------------CCCCCCC
Q 006145 182 AVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGE------------------------------------VPDFSGL 225 (659)
Q Consensus 182 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~------------------------------------~p~~~~l 225 (659)
+.+.+..+ ++..-...|.++.+|+.+.+..+..... ...+...
T Consensus 138 ~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~ 216 (379)
T 4h09_A 138 KRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKTVTAYGFSYG 216 (379)
T ss_dssp CEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCEECTTTTTTC
T ss_pred eeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeEEeecccccc
Confidence 55554432 3334445566667777666554322110 0013334
Q ss_pred CcCCEEEcccCCCC--CCCCCCCcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEecc
Q 006145 226 TYLQVLDLENNALG--PQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIA 303 (659)
Q Consensus 226 ~~L~~L~L~~N~l~--~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~ 303 (659)
.+|+.+.+..+--. ........+|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-...|..+.+|+.+.+.
T Consensus 217 ~~l~~i~~~~~~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~ 294 (379)
T 4h09_A 217 KNLKKITITSGVTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMD 294 (379)
T ss_dssp SSCSEEECCTTCCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEEC
T ss_pred cccceeeeccceeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccccccc
Confidence 44444444332100 000111345555555543 43333445666666666666533 333334456666777777776
Q ss_pred CCcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcC
Q 006145 304 DNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYA 351 (659)
Q Consensus 304 ~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~ 351 (659)
++.++..-...|..+.+|+.++|..+ ++-.-..++.++.+|+.+.+.
T Consensus 295 ~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 295 NSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp CTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred ccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEEC
Confidence 66666555556666667777776544 432223345555666555543
No 421
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.14 E-value=6.4e-06 Score=86.14 Aligned_cols=83 Identities=11% Similarity=0.034 Sum_probs=55.8
Q ss_pred cee-ccCcCceEEEEEec-------CCcEEEEEEecccC---CCchHHHHHHHHHHhCCC-C--CCccceeeeeeecccc
Q 006145 483 AFM-GEGSQGQMYRGRLK-------NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLR-H--RHLVSALGHCFECYFD 548 (659)
Q Consensus 483 ~~i-g~G~~g~Vy~~~~~-------~g~~vavK~l~~~~---~~~~~~~~~Ei~~l~~l~-H--~niv~l~g~~~~~~~~ 548 (659)
+.| +.|....+|+.... ++..+++|+-.... ......+.+|+++++.+. + -.+.++++++.+..
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~-- 103 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD-- 103 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST--
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC--
Confidence 566 77888999998764 26678888865432 112246788988888874 2 35667777765411
Q ss_pred CCCCceeEEEEeccCCCChhh
Q 006145 549 DSSVSRIFLIFEYVPNGTLRS 569 (659)
Q Consensus 549 ~~~~~~~~lV~Ey~~~GsL~~ 569 (659)
..+..++||||++|..+.+
T Consensus 104 --~~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 104 --VLGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp --TTSSCEEEEECCCCBCCCB
T ss_pred --ccCCceEEEEecCCCChhh
Confidence 0134689999999877654
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.08 E-value=1e-05 Score=84.88 Aligned_cols=145 Identities=14% Similarity=0.174 Sum_probs=90.0
Q ss_pred CCceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCC--ccceeeeeeeccccCCCCceeEEE
Q 006145 481 TSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRH--LVSALGHCFECYFDDSSVSRIFLI 558 (659)
Q Consensus 481 ~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~n--iv~l~g~~~~~~~~~~~~~~~~lV 558 (659)
..+.++.|....+|+... +|..+++|.-.. ...+.+|++++..+.... +.++++++... .+..++|
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~-----~~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~------~g~~~lv 112 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSC-----ADGFYKDRYVYRHFASAALPIPEVLDIGEFS------ESLTYCI 112 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESC-----CHHHHHHHHHHHHHCCSSSCCCCEEEEEESS------SSCEEEE
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCc-----hhhHHHHHHHHHHHHhcCCCCceEEEeccCC------CCCeEEE
Confidence 346688899999999875 478899998742 236889999988886533 45666665531 2457999
Q ss_pred EeccCCCChhhh------------------hcCCCCCC--------------CCCHHHHH--------------------
Q 006145 559 FEYVPNGTLRSW------------------ISEGHAHQ--------------SLTWTQRI-------------------- 586 (659)
Q Consensus 559 ~Ey~~~GsL~~~------------------l~~~~~~~--------------~l~~~~~~-------------------- 586 (659)
|||+++.++.+. ||...... .-+|....
T Consensus 113 ~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~ 192 (362)
T 3ovc_A 113 SRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVS 192 (362)
T ss_dssp EECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTH
T ss_pred EEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999998665421 11110000 00121110
Q ss_pred -HHHHHHHHHhhhhcCC-CCCCccccCCCCCceeecCCcceEEccCccccccc
Q 006145 587 -SAAIGVAKGIQFLHTG-IVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (659)
Q Consensus 587 -~i~~~ia~~L~yLH~~-~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~ 637 (659)
.....+.+-++++... ..+.++|+|+.+.||+++++..+.|.||+.+...+
T Consensus 193 ~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~gd 245 (362)
T 3ovc_A 193 ASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFGD 245 (362)
T ss_dssp HHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEEC
T ss_pred ccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccCC
Confidence 1111122222233221 12678999999999999988888899999986554
No 423
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.00 E-value=0.00045 Score=72.57 Aligned_cols=241 Identities=11% Similarity=0.029 Sum_probs=147.7
Q ss_pred ccCCCCCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeecCCCCCCCccccCCCCCCC
Q 006145 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILA 182 (659)
Q Consensus 103 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 182 (659)
+....+|+.+.+.. .++..-..+|.++++|+.++|..+ ++..-..+|.++ +|+.+.+..+ +...-...|.. .+|+
T Consensus 42 ~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~ 116 (379)
T 4h09_A 42 YKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLD 116 (379)
T ss_dssp GGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCS
T ss_pred cccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcc
Confidence 44566788888865 466666788999999999999755 664555678777 6888887654 44333345554 4899
Q ss_pred EEEccCCcCCccCCcccCCCCCCcEEeccccccccCCCCCCCCCcCCEEEcccCCCCCC---------------------
Q 006145 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQ--------------------- 241 (659)
Q Consensus 183 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~--------------------- 241 (659)
.+.+..+ +...-...|.+. +|+.+.+..+--.-....|..+.+++.+.+..+.....
T Consensus 117 ~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (379)
T 4h09_A 117 DFEFPGA-TTEIGNYIFYNS-SVKRIVIPKSVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAK 194 (379)
T ss_dssp EEECCTT-CCEECTTTTTTC-CCCEEEECTTCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTC
T ss_pred cccCCCc-cccccccccccc-eeeeeeccceeeccccchhcccccccccccccccceeecccceecccccceeccccccc
Confidence 9999765 332334455554 57666665442211122377778888877765432110
Q ss_pred ------CCC-----------CCcccceEecCCCcCCccCchhccCCccccEEeccCcccccCCchhhcCCCcccEEeccC
Q 006145 242 ------FPK-----------VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIAD 304 (659)
Q Consensus 242 ------~~~-----------~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~ 304 (659)
+|. ...+|+.+.+..+ +.......|.++..|+.+.+..+ ++..-...|.++.+|+.+.+..
T Consensus 195 ~~~~~~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~ 272 (379)
T 4h09_A 195 TGTEFTIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYA 272 (379)
T ss_dssp CCSEEECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECC
T ss_pred cccccccccceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhccccccc
Confidence 000 0123444444322 33333445666677777777655 4444455677777777777754
Q ss_pred CcCCCcCCcCCCCCCCCCEEECcCCCCcccCChhhhCCCCCCEEEcCCc
Q 006145 305 NKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARN 353 (659)
Q Consensus 305 N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~~~~N 353 (659)
+ ++......|..+.+|+.+++.++.++..-+.++..+.+|+.+.+..+
T Consensus 273 ~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 273 K-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp C-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT
T ss_pred c-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc
Confidence 3 44344456777778888888777776444456667777777776543
No 424
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.81 E-value=6.2e-05 Score=76.07 Aligned_cols=76 Identities=18% Similarity=0.137 Sum_probs=55.3
Q ss_pred CCceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCCCC---CCccceeeeeeeccccCCCCceeEE
Q 006145 481 TSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRH---RHLVSALGHCFECYFDDSSVSRIFL 557 (659)
Q Consensus 481 ~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H---~niv~l~g~~~~~~~~~~~~~~~~l 557 (659)
..+.+|.|..+.||+.++.+|+.|.||+-..........|.+|++.|+.+.- --+.+++++. .-++
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~-----------~~~l 87 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD-----------DRTL 87 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE-----------TTEE
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc-----------CceE
Confidence 3467899999999999999999999998765443334568899998887742 2344444432 1379
Q ss_pred EEeccCCCCh
Q 006145 558 IFEYVPNGTL 567 (659)
Q Consensus 558 V~Ey~~~GsL 567 (659)
||||++.+..
T Consensus 88 v~e~l~~~~~ 97 (288)
T 3f7w_A 88 AMEWVDERPP 97 (288)
T ss_dssp EEECCCCCCC
T ss_pred EEEeecccCC
Confidence 9999987654
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.74 E-value=7.8e-05 Score=77.07 Aligned_cols=148 Identities=9% Similarity=0.111 Sum_probs=80.1
Q ss_pred ceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCCCC--CCccceeeeeeeccccCCCCceeEEEEe
Q 006145 483 AFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRH--RHLVSALGHCFECYFDDSSVSRIFLIFE 560 (659)
Q Consensus 483 ~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H--~niv~l~g~~~~~~~~~~~~~~~~lV~E 560 (659)
+.|+.|..+.||+....+| .+++|+... ...+...|++++..+.. -.+.+++......... ...+..++|||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~----~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~-~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHR----PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYS-KHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECS----CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCE-EETTEEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCC----CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEE-EECCEEEEEEE
Confidence 3455567889999987655 488998864 22344455555554431 1233333210000000 01345789999
Q ss_pred ccCCCChh--------------hhhcC--C-C--C------CCCCCHHHHH-----------------------------
Q 006145 561 YVPNGTLR--------------SWISE--G-H--A------HQSLTWTQRI----------------------------- 586 (659)
Q Consensus 561 y~~~GsL~--------------~~l~~--~-~--~------~~~l~~~~~~----------------------------- 586 (659)
|++|.++. ..+|. . . . ...-.|....
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986553 01221 0 0 0 0112343211
Q ss_pred --HHHHHHHHHhhhhcC----------CCCCCccccCCCCCceeecCCcceEEccCcccccc
Q 006145 587 --SAAIGVAKGIQFLHT----------GIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (659)
Q Consensus 587 --~i~~~ia~~L~yLH~----------~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~ 636 (659)
.+...+.+++++|+. ...+.++|+|+.+.||+++.++.+.|.||+.+...
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~g 253 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFD 253 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEEC
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcccC
Confidence 011123346667763 12458999999999999988888999999988544
No 426
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.71 E-value=9.7e-05 Score=78.36 Aligned_cols=75 Identities=8% Similarity=-0.001 Sum_probs=48.4
Q ss_pred CceeccCcCceEEEEEec-CCcEEEEEEecccCC-------CchHHHHHHHHHHhCCCC--CCc-cceeeeeeeccccCC
Q 006145 482 SAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-------HSTRNFMHHIELISKLRH--RHL-VSALGHCFECYFDDS 550 (659)
Q Consensus 482 ~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-------~~~~~~~~Ei~~l~~l~H--~ni-v~l~g~~~~~~~~~~ 550 (659)
.+.+|.|..+.||+++.. +++.|+||....... ....++.+|+++++.+.. +.. .+++.+.
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d-------- 106 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-------- 106 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--------
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--------
Confidence 467899999999999864 478899998653211 123457889888887742 333 3454332
Q ss_pred CCceeEEEEeccCCC
Q 006145 551 SVSRIFLIFEYVPNG 565 (659)
Q Consensus 551 ~~~~~~lV~Ey~~~G 565 (659)
.+..++||||+++.
T Consensus 107 -~~~~~lvmE~l~g~ 120 (397)
T 2olc_A 107 -TEMAVTVMEDLSHL 120 (397)
T ss_dssp -TTTTEEEECCCTTS
T ss_pred -CCccEEEEEeCCCc
Confidence 22358999999864
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.53 E-value=3.7e-05 Score=71.10 Aligned_cols=82 Identities=12% Similarity=0.064 Sum_probs=40.8
Q ss_pred CCCEEEecCCCCcCCCCcccCCCCCCcEEEcccCc-CcccCChhccCC----CCCcEEEeecCC-CCCCCccccCCCCCC
Q 006145 108 DLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNF-LNGAIPQELSIL----TSLQTLILDENM-LAGRVPDWLGSLPIL 181 (659)
Q Consensus 108 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~l~~l~~L 181 (659)
.|+.|||+++.++..--..+.++++|+.|+|++|. ++..--..++.+ ++|++|+|++|. ++..-=..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 46666666666554433445566666666666663 443222233332 246666666553 432222234445555
Q ss_pred CEEEccCC
Q 006145 182 AVLSLRNN 189 (659)
Q Consensus 182 ~~L~L~~N 189 (659)
+.|+|+++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555544
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.49 E-value=3.2e-05 Score=71.49 Aligned_cols=83 Identities=11% Similarity=0.083 Sum_probs=48.9
Q ss_pred CCCcEEEcccCcCcccCChhccCCCCCcEEEeecCC-CCCCCccccCCC----CCCCEEEccCCc-CCccCCcccCCCCC
Q 006145 131 SSLEILNMSSNFLNGAIPQELSILTSLQTLILDENM-LAGRVPDWLGSL----PILAVLSLRNNM-FNGTLPDSFSYLEN 204 (659)
Q Consensus 131 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~ 204 (659)
.+|+.|||+++.++..--..+.++++|+.|+|++|. ++..-=..+..+ ++|++|+|++|. ++..-=..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 468888888888765434456677778888887774 443222234443 256777776653 54322223455566
Q ss_pred CcEEecccc
Q 006145 205 LRVLALSNN 213 (659)
Q Consensus 205 L~~L~Ls~N 213 (659)
|+.|+|+++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 666666655
No 429
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.46 E-value=0.0014 Score=66.86 Aligned_cols=138 Identities=10% Similarity=0.115 Sum_probs=90.7
Q ss_pred CceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCCC---CCCccceeeeeeeccccCCCCceeEEE
Q 006145 482 SAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR---HRHLVSALGHCFECYFDDSSVSRIFLI 558 (659)
Q Consensus 482 ~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~---H~niv~l~g~~~~~~~~~~~~~~~~lV 558 (659)
.+.|+.|....+|+... ++..+++|+-... ....|.+|++.|+.+. ...+.++++++.. .+..++|
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~-------~g~~~lv 109 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNS-------QGHSFLL 109 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEEC-------SSEEEEE
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeec-------CCceEEE
Confidence 46788999999999886 4667888887532 3466889998888874 3567888887754 3568999
Q ss_pred EeccCCCChhh-----------hhcCCCC--C-----------------CCCCHHHHH---HHH--HH------------
Q 006145 559 FEYVPNGTLRS-----------WISEGHA--H-----------------QSLTWTQRI---SAA--IG------------ 591 (659)
Q Consensus 559 ~Ey~~~GsL~~-----------~l~~~~~--~-----------------~~l~~~~~~---~i~--~~------------ 591 (659)
|||+++..+.. .||.... . -.-+|.... ++. .+
T Consensus 110 me~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~ 189 (312)
T 3jr1_A 110 LEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNI 189 (312)
T ss_dssp EECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCH
T ss_pred EEeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHH
Confidence 99999876521 1232111 0 012565422 111 11
Q ss_pred --HHH-Hhhhhc-CCCCCCccccCCCCCceeecCCcceEEccCc
Q 006145 592 --VAK-GIQFLH-TGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (659)
Q Consensus 592 --ia~-~L~yLH-~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 631 (659)
+.+ ..+.|. ....|.++|+|+.+.||+++.++ +.|.||.
T Consensus 190 ~~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 190 DLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 111 122342 22467899999999999999887 8899984
No 430
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.11 E-value=0.001 Score=68.06 Aligned_cols=166 Identities=10% Similarity=0.135 Sum_probs=89.4
Q ss_pred cCHHHHHHhhcCCCCC-----ceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCC--cccee
Q 006145 467 FSLEELEEATNNFDTS-----AFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRH--LVSAL 539 (659)
Q Consensus 467 ~~~~~l~~~~~~~~~~-----~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~n--iv~l~ 539 (659)
++.+++......|... +.|+.|....+|+....+| .+++|...... ..+++..|++++..+.... +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 5566666666666552 3456677789999987656 57788876421 2345667777777664222 23333
Q ss_pred eeeeeccccCCCCceeEEEEeccCCCChhh--------------hhcCC--C--CC-----CCCCHHHHHHH--------
Q 006145 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRS--------------WISEG--H--AH-----QSLTWTQRISA-------- 588 (659)
Q Consensus 540 g~~~~~~~~~~~~~~~~lV~Ey~~~GsL~~--------------~l~~~--~--~~-----~~l~~~~~~~i-------- 588 (659)
......... ...+..++|+||++|..+.. .+|.. . .. ....|.....-
T Consensus 84 ~~~~g~~~~-~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 84 PRKDGELLG-ELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CBTTCCSCE-EETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred CCCCCCEEE-EECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 211000000 00245689999999865421 11210 0 00 00124331110
Q ss_pred ----HHHHHHHhhhhcC----CCCCCccccCCCCCceeecCCcceEEccCcccccc
Q 006145 589 ----AIGVAKGIQFLHT----GIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (659)
Q Consensus 589 ----~~~ia~~L~yLH~----~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~ 636 (659)
...+.+.++++++ ...+.++|+|+.+.||+++++..+.|.||+.+...
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~g 218 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACND 218 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccCc
Confidence 0113344455542 22357899999999999998766689999987543
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.08 E-value=0.0014 Score=69.88 Aligned_cols=33 Identities=6% Similarity=0.237 Sum_probs=28.5
Q ss_pred CCccccCCCCCceeecCCcceEEccCcccccccc
Q 006145 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAEN 638 (659)
Q Consensus 605 ~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~~ 638 (659)
+.++|+|+++.||++++++ ++|.||+.+.....
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p 264 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPM 264 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCch
Confidence 4899999999999998776 99999999876543
No 432
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.96 E-value=0.0067 Score=62.04 Aligned_cols=148 Identities=5% Similarity=0.060 Sum_probs=82.2
Q ss_pred ceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCC--CccceeeeeeeccccCCCCceeEEEEe
Q 006145 483 AFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHR--HLVSALGHCFECYFDDSSVSRIFLIFE 560 (659)
Q Consensus 483 ~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~--niv~l~g~~~~~~~~~~~~~~~~lV~E 560 (659)
..++ |....||+....+|+.+++|...... ....++..|.+++..+... .+.+++.. ++..-....+..++|||
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~--~g~~~~~~~g~~~~l~~ 107 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAF--NGQTLLNHQGFYFAVFP 107 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCB--TTBSCEEETTEEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeec--CCcEEEEECCEEEEEEE
Confidence 3466 77789999887778789999986432 2345677788887777422 24444443 11000000245688999
Q ss_pred ccCCCChhh-----------h---hcC----CC--CCCCCCHHHH----HHH---------------HHHHHHHhhhhcC
Q 006145 561 YVPNGTLRS-----------W---ISE----GH--AHQSLTWTQR----ISA---------------AIGVAKGIQFLHT 601 (659)
Q Consensus 561 y~~~GsL~~-----------~---l~~----~~--~~~~l~~~~~----~~i---------------~~~ia~~L~yLH~ 601 (659)
|++|.++.. . +|. .. .....++... ..+ ...+.+.++.+..
T Consensus 108 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (328)
T 1zyl_A 108 SVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTA 187 (328)
T ss_dssp CCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 998755421 0 111 00 0112233211 000 0011111222221
Q ss_pred ----CCCCCccccCCCCCceeecCCcceEEccCcccccc
Q 006145 602 ----GIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (659)
Q Consensus 602 ----~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~ 636 (659)
...+.++|+|+++.||+++ + .+.|.||+.+...
T Consensus 188 ~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g 224 (328)
T 1zyl_A 188 HWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNG 224 (328)
T ss_dssp HCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred HhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence 1234689999999999999 4 8999999887544
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.84 E-value=0.0003 Score=66.28 Aligned_cols=87 Identities=13% Similarity=0.123 Sum_probs=48.0
Q ss_pred ccCCCCCCEEEecCC-CCcCC----CCcccCCCCCCcEEEcccCcCcc----cCChhccCCCCCcEEEeecCCCCCC---
Q 006145 103 LVKLPDLKVLRLVSL-GLWGP----LSGKISRLSSLEILNMSSNFLNG----AIPQELSILTSLQTLILDENMLAGR--- 170 (659)
Q Consensus 103 l~~l~~L~~L~L~~n-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~--- 170 (659)
+.+-+.|+.|+|++| .+... +-..+..-+.|+.|+|++|.|.. .+...+..-+.|+.|+|+.|.|...
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 345566777777764 55321 23345555677777777777752 2233444556677777777766532
Q ss_pred -CccccCCCCCCCEEEccCC
Q 006145 171 -VPDWLGSLPILAVLSLRNN 189 (659)
Q Consensus 171 -~p~~l~~l~~L~~L~L~~N 189 (659)
+-+.+..-+.|+.|+|++|
T Consensus 117 ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHhhCCceeEEECCCC
Confidence 1223344445666666543
No 434
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.81 E-value=0.003 Score=67.49 Aligned_cols=72 Identities=19% Similarity=0.256 Sum_probs=48.4
Q ss_pred ceeccCcCceEEEEEecC--------CcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCc-cceeeeeeeccccCCCCc
Q 006145 483 AFMGEGSQGQMYRGRLKN--------GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHL-VSALGHCFECYFDDSSVS 553 (659)
Q Consensus 483 ~~ig~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~ni-v~l~g~~~~~~~~~~~~~ 553 (659)
+.|+.|....+|++...+ +..+++|+.... .....+.+|..+++.+...++ .++++.+.+
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~--------- 147 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG--------- 147 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT---------
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC---------
Confidence 567778888999998753 478899987431 112566789988888753334 556654421
Q ss_pred eeEEEEeccCCCCh
Q 006145 554 RIFLIFEYVPNGTL 567 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL 567 (659)
.+|+||+++.++
T Consensus 148 --g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 --GRLEEYIPSRPL 159 (429)
T ss_dssp --EEEECCCCEEEC
T ss_pred --CEEEEEeCCccc
Confidence 389999986444
No 435
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.76 E-value=0.0078 Score=61.78 Aligned_cols=34 Identities=6% Similarity=0.034 Sum_probs=28.6
Q ss_pred CCCccccCCCCCceeecCC----cceEEccCccccccc
Q 006145 604 VPGVFSNNLKITDILLDQN----LVAKISSYNLPLLAE 637 (659)
Q Consensus 604 ~~~iiHrDlk~~NILld~~----~~~kl~DFGla~~~~ 637 (659)
.+.++|+|+.+.||+++++ ..+.|.||+.+....
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~ 219 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH 219 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence 4579999999999999875 678999999886553
No 436
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.63 E-value=0.0029 Score=55.47 Aligned_cols=54 Identities=15% Similarity=0.227 Sum_probs=23.5
Q ss_pred EEEcccCCCC--CCCCCCCcccceEecCCCcCCccCchhccCCccccEEeccCccc
Q 006145 230 VLDLENNALG--PQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRF 283 (659)
Q Consensus 230 ~L~L~~N~l~--~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 283 (659)
.++.+++.++ ..+.....+|+.|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 4445555444 22222233444444444444443344444444444444444443
No 437
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.62 E-value=0.0044 Score=62.67 Aligned_cols=140 Identities=10% Similarity=-0.012 Sum_probs=74.8
Q ss_pred CceeccCcCceEEEEEecCCcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCc-cceeeeeeeccccCCCCceeEEEEe
Q 006145 482 SAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHL-VSALGHCFECYFDDSSVSRIFLIFE 560 (659)
Q Consensus 482 ~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~ni-v~l~g~~~~~~~~~~~~~~~~lV~E 560 (659)
.+.|+.|....+|+. ..+++|+...... ...+..+|+++++.+....+ .++++++. +.-++|+|
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~-~~~~r~~E~~~l~~l~~~g~~P~~~~~~~---------~~~~~v~e 87 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTE-EYINRANEAVAAREAAKAGVSPEVLHVDP---------ATGVMVTR 87 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECT---------TTCCEEEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCcc-ceeCHHHHHHHHHHHHHcCCCCceEEEEC---------CCCEEEEe
Confidence 577888999999998 4588887754321 11223567777776643233 35554332 22478999
Q ss_pred cc-CCCChhh------------------hhcCCCCC--CCCCHHHHH-HHHHH--------------HHHHh----hhhc
Q 006145 561 YV-PNGTLRS------------------WISEGHAH--QSLTWTQRI-SAAIG--------------VAKGI----QFLH 600 (659)
Q Consensus 561 y~-~~GsL~~------------------~l~~~~~~--~~l~~~~~~-~i~~~--------------ia~~L----~yLH 600 (659)
|+ ++.++.. -+|..... ...+...++ .+... +.+.+ +.+.
T Consensus 88 ~i~~g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 167 (301)
T 3dxq_A 88 YIAGAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALA 167 (301)
T ss_dssp CCTTCEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHH
T ss_pred ecCCCccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHH
Confidence 99 5544431 11211100 011111111 11100 01111 1111
Q ss_pred -CCCCCCccccCCCCCceeecCCcceEEccCccccccc
Q 006145 601 -TGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (659)
Q Consensus 601 -~~~~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~ 637 (659)
....+.++|+|+.+.||+ .+++.+.+.||..+...+
T Consensus 168 ~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g~ 204 (301)
T 3dxq_A 168 AHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGMND 204 (301)
T ss_dssp SSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEEEC
T ss_pred hcCCCceeeccCCCcCCEE-ECCCCEEEEecccccCCC
Confidence 122346899999999999 666778999999886543
No 438
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.56 E-value=0.00055 Score=64.45 Aligned_cols=88 Identities=13% Similarity=0.173 Sum_probs=54.6
Q ss_pred ccCCCCCCcEEEcccC-cCcc----cCChhccCCCCCcEEEeecCCCCCC----CccccCCCCCCCEEEccCCcCCcc--
Q 006145 126 KISRLSSLEILNMSSN-FLNG----AIPQELSILTSLQTLILDENMLAGR----VPDWLGSLPILAVLSLRNNMFNGT-- 194 (659)
Q Consensus 126 ~~~~l~~L~~L~Ls~N-~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~-- 194 (659)
.+.+-+.|+.|+|++| .|.. .+-..+..-+.|+.|+|++|+|... +-+.+..-+.|+.|+|++|.|...
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 3455678888888885 6642 2345566677888888888887632 223344456677777777777642
Q ss_pred --CCcccCCCCCCcEEecccc
Q 006145 195 --LPDSFSYLENLRVLALSNN 213 (659)
Q Consensus 195 --~p~~~~~l~~L~~L~Ls~N 213 (659)
+-+.+..-+.|+.|+|++|
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHHhhCCceeEEECCCC
Confidence 2223444455677777654
No 439
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.53 E-value=0.012 Score=63.24 Aligned_cols=73 Identities=12% Similarity=0.037 Sum_probs=45.9
Q ss_pred ceeccCcCceEEEEEecC-CcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCc-cceeeeeeeccccCCCCceeEEEEe
Q 006145 483 AFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHL-VSALGHCFECYFDDSSVSRIFLIFE 560 (659)
Q Consensus 483 ~~ig~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~ni-v~l~g~~~~~~~~~~~~~~~~lV~E 560 (659)
+.|+.|-...+|+....+ +..+++|+..... ...-+-.+|.+++..+...++ .++++++. + .+|||
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~idR~~E~~vl~~L~~~gl~P~ll~~~~---------~--G~v~e 181 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DEIINREREKKISCILYNKNIAKKIYVFFT---------N--GRIEE 181 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-C-CSCSCHHHHHHHHHHHTTSSSBCCEEEEET---------T--EEEEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC---------C--eEEEE
Confidence 567778888999998765 4778888874322 111122578888888865445 45665542 1 35999
Q ss_pred ccCCCCh
Q 006145 561 YVPNGTL 567 (659)
Q Consensus 561 y~~~GsL 567 (659)
|+++.++
T Consensus 182 ~I~G~~l 188 (458)
T 2qg7_A 182 FMDGYAL 188 (458)
T ss_dssp CCCSEEC
T ss_pred eeCCccC
Confidence 9987554
No 440
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.48 E-value=0.0099 Score=62.21 Aligned_cols=142 Identities=11% Similarity=0.075 Sum_probs=82.4
Q ss_pred ceeccCcCceEEEEEecC--------CcEEEEEEecccCCCchHHHHHHHHHHhCCCCCC-ccceeeeeeeccccCCCCc
Q 006145 483 AFMGEGSQGQMYRGRLKN--------GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRH-LVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 483 ~~ig~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~n-iv~l~g~~~~~~~~~~~~~ 553 (659)
+.+..|-...+|++...+ ++.+++|+... .......+.+|.++++.+.-.+ ..++++++. +
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~---------~ 125 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-ILQGVDSLVLESVMFAILAERSLGPQLYGVFP---------E 125 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET---------T
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcC---------C
Confidence 456667778899998752 47889998632 1223456778999888774222 345555542 1
Q ss_pred eeEEEEeccCCCChhhh-----------------hcCCC--CCCCCC--HHHHHHHHHHHHH------------------
Q 006145 554 RIFLIFEYVPNGTLRSW-----------------ISEGH--AHQSLT--WTQRISAAIGVAK------------------ 594 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL~~~-----------------l~~~~--~~~~l~--~~~~~~i~~~ia~------------------ 594 (659)
.+||||++|.++..- ||... ...... |.+..++..++..
T Consensus 126 --g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~ 203 (379)
T 3feg_A 126 --GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLK 203 (379)
T ss_dssp --EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHH
T ss_pred --ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHH
Confidence 399999998665311 12111 011222 3444444443322
Q ss_pred -Hhhhhc----C-CCCCCccccCCCCCceeecCC----cceEEccCcccccc
Q 006145 595 -GIQFLH----T-GIVPGVFSNNLKITDILLDQN----LVAKISSYNLPLLA 636 (659)
Q Consensus 595 -~L~yLH----~-~~~~~iiHrDlk~~NILld~~----~~~kl~DFGla~~~ 636 (659)
.+++|. . .....++|+|+.+.||+++++ +.+.+.||..+...
T Consensus 204 ~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~~ 255 (379)
T 3feg_A 204 DEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYN 255 (379)
T ss_dssp HHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEEE
T ss_pred HHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCcC
Confidence 122222 1 223468999999999999876 78999999988544
No 441
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.47 E-value=0.0036 Score=54.80 Aligned_cols=34 Identities=26% Similarity=0.278 Sum_probs=13.0
Q ss_pred CCEEEccCCcCCccCCcccCCCCCCcEEeccccc
Q 006145 181 LAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNH 214 (659)
Q Consensus 181 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 214 (659)
|+.|+|++|+|+..-+..|..+++|+.|+|++|.
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP 66 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANP 66 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSC
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCC
Confidence 3333333333333222333334444444444443
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.11 E-value=0.0073 Score=63.01 Aligned_cols=73 Identities=18% Similarity=0.119 Sum_probs=42.3
Q ss_pred ceeccCcCceEEEEEecC---------CcEEEEEEecccCCCchHHHHHHHHHHhCCCCCCc-cceeeeeeeccccCCCC
Q 006145 483 AFMGEGSQGQMYRGRLKN---------GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHL-VSALGHCFECYFDDSSV 552 (659)
Q Consensus 483 ~~ig~G~~g~Vy~~~~~~---------g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~ni-v~l~g~~~~~~~~~~~~ 552 (659)
..++.|....+|+....+ +..+++|+..... ....+..+|.++++.+...++ .++++...
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~~~~E~~~l~~L~~~g~~P~~~~~~~--------- 108 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-DELYNTISEFEVYKTMSKYKIAPQLLNTFN--------- 108 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-GGTSCHHHHHHHHHHHHHTTSSCCEEEEET---------
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-cceecHHHHHHHHHHHHhcCCCCceEEecC---------
Confidence 456777778999998653 2678888764321 111124578877777753333 35554321
Q ss_pred ceeEEEEeccCCCCh
Q 006145 553 SRIFLIFEYVPNGTL 567 (659)
Q Consensus 553 ~~~~lV~Ey~~~GsL 567 (659)
-++||||++|.++
T Consensus 109 --~~~v~e~i~G~~l 121 (369)
T 3c5i_A 109 --GGRIEEWLYGDPL 121 (369)
T ss_dssp --TEEEEECCCSEEC
T ss_pred --CcEEEEEecCCcC
Confidence 2689999987544
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.77 E-value=0.071 Score=54.79 Aligned_cols=34 Identities=15% Similarity=0.256 Sum_probs=29.0
Q ss_pred CCCccccCCCCCceeecCCcceEEccCccccccc
Q 006145 604 VPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (659)
Q Consensus 604 ~~~iiHrDlk~~NILld~~~~~kl~DFGla~~~~ 637 (659)
.+.++|+|+.+.||++++++.+.|.||+.+...+
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~~ 238 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLAP 238 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEEEC
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCeeCC
Confidence 3578999999999999988889999998875443
No 444
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=94.93 E-value=0.017 Score=39.38 Aligned_cols=32 Identities=16% Similarity=0.209 Sum_probs=17.7
Q ss_pred ceeeeehhhHHHHHHHHHHHHHHhhhhhhccc
Q 006145 389 KAVLALSIIGGIIGGISLVVIAFLLVRRTKSK 420 (659)
Q Consensus 389 ~~~i~~~ii~~~v~~i~l~~~~~~~~rr~~~~ 420 (659)
...++++++++++++++++++.++++|||+.+
T Consensus 10 ~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 10 IPSIATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp SSSSTHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred cceEEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 34466666666665555555555555555443
No 445
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=94.65 E-value=0.017 Score=39.24 Aligned_cols=30 Identities=27% Similarity=0.379 Sum_probs=15.6
Q ss_pred eeeehhhHHHHHHHHHHHHHHhhhhhhccc
Q 006145 391 VLALSIIGGIIGGISLVVIAFLLVRRTKSK 420 (659)
Q Consensus 391 ~i~~~ii~~~v~~i~l~~~~~~~~rr~~~~ 420 (659)
.+++++++++++++++++..++++|||+.+
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 455555555555444444455555555443
No 446
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.48 E-value=0.095 Score=55.02 Aligned_cols=33 Identities=12% Similarity=0.066 Sum_probs=28.0
Q ss_pred CCCccccCCCCCceeecCC------cceEEccCcccccc
Q 006145 604 VPGVFSNNLKITDILLDQN------LVAKISSYNLPLLA 636 (659)
Q Consensus 604 ~~~iiHrDlk~~NILld~~------~~~kl~DFGla~~~ 636 (659)
...++|+|+.+.||+++++ +.+.+.||..|...
T Consensus 243 ~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~~ 281 (401)
T 3f2s_A 243 PVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYN 281 (401)
T ss_dssp CEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEEE
T ss_pred CeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCcC
Confidence 3468999999999999877 78999999988543
No 447
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.50 E-value=0.3 Score=51.63 Aligned_cols=73 Identities=11% Similarity=0.047 Sum_probs=45.9
Q ss_pred ceeccCcCceEEEEEecC--------CcEEEEEEecccCCCchHHHHHHHHHHhCCCCCC-ccceeeeeeeccccCCCCc
Q 006145 483 AFMGEGSQGQMYRGRLKN--------GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRH-LVSALGHCFECYFDDSSVS 553 (659)
Q Consensus 483 ~~ig~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~~Ei~~l~~l~H~n-iv~l~g~~~~~~~~~~~~~ 553 (659)
+.+..|-...+|+....+ +..+++|+..... ...-+-.+|.++++.+.-.+ ..++++.+.
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~---------- 144 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP---------- 144 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----------
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----------
Confidence 456667778999998763 5788888864322 11223457888777774223 345554321
Q ss_pred eeEEEEeccCCCCh
Q 006145 554 RIFLIFEYVPNGTL 567 (659)
Q Consensus 554 ~~~lV~Ey~~~GsL 567 (659)
-++||||++|.+|
T Consensus 145 -~~~I~efI~G~~l 157 (424)
T 3mes_A 145 -EGRIEEFIDGEPL 157 (424)
T ss_dssp -TEEEEECCCSEEC
T ss_pred -CCEEEEEeCCccC
Confidence 2789999998664
No 448
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=89.70 E-value=0.18 Score=34.17 Aligned_cols=10 Identities=20% Similarity=0.378 Sum_probs=4.3
Q ss_pred HHhhhhhhcc
Q 006145 410 AFLLVRRTKS 419 (659)
Q Consensus 410 ~~~~~rr~~~ 419 (659)
.++++|||+.
T Consensus 31 ~~~~~RRR~~ 40 (44)
T 2jwa_A 31 FGILIKRRQQ 40 (44)
T ss_dssp HHHHHHHHCS
T ss_pred HHhheehhhh
Confidence 3444454443
No 449
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=86.21 E-value=0.34 Score=31.87 Aligned_cols=26 Identities=27% Similarity=0.337 Sum_probs=11.8
Q ss_pred eeeehhhHHHHHHHHHH-HHHHhhhhh
Q 006145 391 VLALSIIGGIIGGISLV-VIAFLLVRR 416 (659)
Q Consensus 391 ~i~~~ii~~~v~~i~l~-~~~~~~~rr 416 (659)
..+++++++++++++++ ++++|++||
T Consensus 11 GaIAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 11 GEIVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CceeeeehHHHHHHHHHHHHHHHHeec
Confidence 34455555555444433 334444443
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=85.06 E-value=0.12 Score=55.42 Aligned_cols=60 Identities=7% Similarity=-0.043 Sum_probs=18.1
Q ss_pred CceeccCcCceEEEEEecC-CcEEEE------EEecccCC--CchHHHHHHHHHHhCCCCCCccceeeeeee
Q 006145 482 SAFMGEGSQGQMYRGRLKN-GTFVAI------RCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFE 544 (659)
Q Consensus 482 ~~~ig~G~~g~Vy~~~~~~-g~~vav------K~l~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~ 544 (659)
.+.+| ||.||+|.+.. ..+||| |..+.... +...+|.+|..+++..+|||+++.++|...
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 35565 99999999864 467888 76654332 223578999999999999999999998764
No 451
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=78.89 E-value=0.86 Score=47.73 Aligned_cols=30 Identities=13% Similarity=0.203 Sum_probs=24.9
Q ss_pred ccccCCCCCceee------cCCcceEEccCcccccc
Q 006145 607 VFSNNLKITDILL------DQNLVAKISSYNLPLLA 636 (659)
Q Consensus 607 iiHrDlk~~NILl------d~~~~~kl~DFGla~~~ 636 (659)
++|+|+.+.||++ +++..+.+.||..|..-
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~n 281 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYN 281 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccCC
Confidence 5799999999999 34567999999988543
No 452
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=76.47 E-value=8.4 Score=36.15 Aligned_cols=87 Identities=10% Similarity=0.072 Sum_probs=60.3
Q ss_pred CCCCccceeeeeeeccccCCCCceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCcccc
Q 006145 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSN 610 (659)
Q Consensus 531 ~H~niv~l~g~~~~~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHr 610 (659)
.||+.+.. .+-.+ .+.+.+.|+.-+.+-=+..++ .++-..+++++..|+..-++++.. +|-
T Consensus 43 ~~~~Fl~~-~I~e~-------eD~v~~~y~~~~~~~~f~~ik------~~~~~eKlr~l~ni~~l~~~~~~r-----~tf 103 (215)
T 4ann_A 43 HSPYFIDA-ELTEL-------RDSFQIHYDINDNHTPFDNIK------SFTKNEKLRYLLNIKNLEEVNRTR-----YTF 103 (215)
T ss_dssp CCTTBCCE-EEEEC-------SSEEEEEECCCTTSEEGGGGG------GSCHHHHHHHHHHGGGGGGGGGSS-----EEC
T ss_pred cCCcccce-EEEEc-------ccEEEEEEEcCcccCCHHHHH------hcCHHHHHHHHHHHHHHHHHhcCc-----eEE
Confidence 57887765 23322 344555555444322222233 378899999999999988877754 577
Q ss_pred CCCCCceeecCCcceEEccCcccccc
Q 006145 611 NLKITDILLDQNLVAKISSYNLPLLA 636 (659)
Q Consensus 611 Dlk~~NILld~~~~~kl~DFGla~~~ 636 (659)
-+.|+||++|.++.|++.-.|+.-.+
T Consensus 104 ~L~P~NL~f~~~~~p~i~~RGik~~l 129 (215)
T 4ann_A 104 VLAPDELFFTRDGLPIAKTRGLQNVV 129 (215)
T ss_dssp CCSGGGEEECTTSCEEESCCEETTTB
T ss_pred EEecceEEEcCCCCEEEEEccCccCC
Confidence 88999999999999999999985433
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=74.55 E-value=12 Score=35.12 Aligned_cols=74 Identities=11% Similarity=0.026 Sum_probs=54.8
Q ss_pred CceeEEEEeccCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHhh-hhcCCCCCCccccCCCCCceeecCCcceEEccC
Q 006145 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQ-FLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (659)
Q Consensus 552 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~-yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 630 (659)
.+.+.+.|+--+++.=+..++ .++...+++++..++.... +++.. +|--+.|+||++|.++.|++.-.
T Consensus 60 eD~~~i~y~~~~~~~~f~~i~------~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~NL~f~~~~~p~i~hR 128 (219)
T 4ano_A 60 EDEVKVVIKPPSSFLTFAAIR------KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPENLMFNRALEPFFLHV 128 (219)
T ss_dssp SSEEEEEEECCTTCEEHHHHH------TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGGEEECTTCCEEESCC
T ss_pred CCEEEEEEEcCcccCcHHHHH------hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCceEEEeCCCcEEEEEc
Confidence 455566666554443333443 3788999999999999888 66654 56678899999999999999999
Q ss_pred cccccc
Q 006145 631 NLPLLA 636 (659)
Q Consensus 631 Gla~~~ 636 (659)
|+-..+
T Consensus 129 Gi~~~l 134 (219)
T 4ano_A 129 GVKESL 134 (219)
T ss_dssp EETTTB
T ss_pred CCcccC
Confidence 986444
No 454
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=67.29 E-value=0.6 Score=29.87 Aligned_cols=6 Identities=33% Similarity=0.949 Sum_probs=2.6
Q ss_pred hhhhhh
Q 006145 412 LLVRRT 417 (659)
Q Consensus 412 ~~~rr~ 417 (659)
+++|||
T Consensus 29 ~~iRRr 34 (35)
T 1iij_A 29 ILIKRR 34 (35)
T ss_dssp HHHHHC
T ss_pred eEEeec
Confidence 344443
No 455
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=44.18 E-value=14 Score=23.37 Aligned_cols=25 Identities=20% Similarity=0.267 Sum_probs=13.5
Q ss_pred eeehhhHHHHHHHHHHHHHHhhhhh
Q 006145 392 LALSIIGGIIGGISLVVIAFLLVRR 416 (659)
Q Consensus 392 i~~~ii~~~v~~i~l~~~~~~~~rr 416 (659)
.+++++++.+.+.+++++++++++|
T Consensus 8 aIaGIVvgdi~~t~~i~~~vy~~~r 32 (33)
T 2l34_A 8 VLAGIVVGDLVLTVLIALAVYFLGR 32 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred eEEeEeHHHHHHHHHHHHHHhheec
Confidence 3445555555555555555655543
No 456
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=41.47 E-value=28 Score=25.50 Aligned_cols=19 Identities=16% Similarity=0.572 Sum_probs=11.8
Q ss_pred hhhHHHHHHHHHHHHHHhh
Q 006145 395 SIIGGIIGGISLVVIAFLL 413 (659)
Q Consensus 395 ~ii~~~v~~i~l~~~~~~~ 413 (659)
++++++++++++.++.+|+
T Consensus 12 ivlGg~~~lll~~glcI~c 30 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIFF 30 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHH
Confidence 4566666666666666664
No 457
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=39.70 E-value=18 Score=27.96 Aligned_cols=18 Identities=28% Similarity=0.486 Sum_probs=8.3
Q ss_pred hhhHHHHHHHHHHHHHHh
Q 006145 395 SIIGGIIGGISLVVIAFL 412 (659)
Q Consensus 395 ~ii~~~v~~i~l~~~~~~ 412 (659)
++++++++++++++++++
T Consensus 12 ~Iv~gvi~gilliGllll 29 (79)
T 2knc_B 12 VVLLSVMGAILLIGLAAL 29 (79)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHH
Confidence 344455555544444433
No 458
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=38.02 E-value=19 Score=22.60 Aligned_cols=24 Identities=21% Similarity=0.354 Sum_probs=11.5
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhc
Q 006145 395 SIIGGIIGGISLVVIAFLLVRRTK 418 (659)
Q Consensus 395 ~ii~~~v~~i~l~~~~~~~~rr~~ 418 (659)
.++++.++++.+++..|++||-||
T Consensus 11 t~i~gl~vif~~lg~tflywrgrr 34 (40)
T 2l9u_A 11 TVIAGLVVIFMMLGGTFLYWRGRR 34 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCceeEEEcccc
Confidence 344444444444445566665443
No 459
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=32.15 E-value=90 Score=25.01 Aligned_cols=42 Identities=17% Similarity=0.101 Sum_probs=21.0
Q ss_pred CCCcccCCCCCCcEEEcccCcCcccCChhccCCCCCcEEEeec
Q 006145 122 PLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDE 164 (659)
Q Consensus 122 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 164 (659)
.-..+|.++++|+.+.+-.+ ++..-..+|.++.+|+.+.+..
T Consensus 11 I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp SCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33445555556665555543 2223334455555555555543
No 460
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=28.65 E-value=1.2e+02 Score=24.23 Aligned_cols=39 Identities=13% Similarity=0.081 Sum_probs=18.6
Q ss_pred ChhccCCCCCcEEEeecCCCCCCCccccCCCCCCCEEEcc
Q 006145 148 PQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR 187 (659)
Q Consensus 148 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 187 (659)
...|.++++|+.+.|-.+ ++..-...|.++.+|+.+.+.
T Consensus 13 ~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 13 KSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp SCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred HHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 344555555555555443 222223445555555555444
No 461
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=28.39 E-value=37 Score=22.76 Aligned_cols=19 Identities=32% Similarity=0.530 Sum_probs=9.3
Q ss_pred hhhHHHHHHHHHHHHHHhh
Q 006145 395 SIIGGIIGGISLVVIAFLL 413 (659)
Q Consensus 395 ~ii~~~v~~i~l~~~~~~~ 413 (659)
++++++++++++++++.+.
T Consensus 11 ~Iv~gvi~~ivliGl~lLl 29 (43)
T 2k9j_B 11 VVLLSVMGAILLIGLAALL 29 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred ehHHHHHHHHHHHHHHHHH
Confidence 4445555555555444433
No 462
>2llm_A Amyloid beta A4 protein; alzheimer'S disease, protein fibril; NMR {Homo sapiens} PDB: 2loh_A
Probab=21.75 E-value=29 Score=23.13 Aligned_cols=9 Identities=22% Similarity=0.807 Sum_probs=3.8
Q ss_pred HHHHhhhhh
Q 006145 408 VIAFLLVRR 416 (659)
Q Consensus 408 ~~~~~~~rr 416 (659)
++.++..||
T Consensus 34 Vvsl~mlRr 42 (43)
T 2llm_A 34 VITLVMLKK 42 (43)
Confidence 344444443
Done!