BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 006149
         (659 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|2PXX|A Chain A, Human Putative Methyltransferase Mgc2408
          Length = 215

 Score =  102 bits (255), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 18/180 (10%)

Query: 29  ENWDKFFTIRGIGDS--FEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHL 86
           E WD+ +  +G  DS  ++W+ ++   R  L      P   P  +ILV GCGNS LS  L
Sbjct: 8   EYWDQRY--QGAADSAPYDWFGDFSSFRALL-----EPELRPEDRILVLGCGNSALSYEL 60

Query: 87  YDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146
           +  GF  +T+VD+S VV++ M +        +RW  MD+  + F   +FDV+L+KG LDA
Sbjct: 61  FLGGFPNVTSVDYSSVVVAAM-QACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDA 119

Query: 147 LMEPEL--------GHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKM 198
           L+  E         G    +Q LSEV R+L  GG+F+ +T A  H     + +  +GW +
Sbjct: 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAPHFRTRHYAQAYYGWSL 179


>pdb|1VE3|A Chain A, Crystal Structure Of Ph0226 Protein From Pyrococcus
           Horikoshii Ot3
 pdb|1VE3|B Chain B, Crystal Structure Of Ph0226 Protein From Pyrococcus
           Horikoshii Ot3
          Length = 227

 Score = 42.0 bits (97), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 73/176 (41%), Gaps = 27/176 (15%)

Query: 71  QILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQF 130
           ++L   CG    S  L D GF  +  VD S+  I           S++ + V D   + F
Sbjct: 41  KVLDLACGVGGFSFLLEDYGFE-VVGVDISEDXIRKAREYAKSRESNVEFIVGDARKLSF 99

Query: 131 MDETFDVILDKGGLDALM--EP-ELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGL 187
            D+TFD ++    +D+++  EP EL     NQ   EV+R+LK  GKF+        +L  
Sbjct: 100 EDKTFDYVI---FIDSIVHFEPLEL-----NQVFKEVRRVLKPSGKFIXYFTDLRELLPR 151

Query: 188 LFPKFRFGWKMSVHAIPQKSSSEPSLQTFMVVADKENSSVVLQVTSSFDHSSLDCN 243
           L      G K  +                 V+ D+E  +VV++  S  D   +  N
Sbjct: 152 LKESLVVGQKYWISK---------------VIPDQEERTVVIEFKSEQDSFRVRFN 192


>pdb|3L8D|A Chain A, Crystal Structure Of Methyltransferase From Bacillus
           Thuringiensis
          Length = 242

 Score = 41.6 bits (96), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 11/109 (10%)

Query: 71  QILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQF 130
           ++L  GCG+   +  L   G+  +  VD S+V I     R   +  D+ +   D++S+ F
Sbjct: 56  EVLDVGCGDGYGTYKLSRTGYKAV-GVDISEVXIQKGKERG--EGPDLSFIKGDLSSLPF 112

Query: 131 MDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179
            +E F+ I     L+   EP        + L+E+KR+LKS G + C+ +
Sbjct: 113 ENEQFEAIXAINSLEWTEEP-------LRALNEIKRVLKSDG-YACIAI 153


>pdb|3CCF|A Chain A, Crystal Structure Of Putative Methyltransferase
           (Yp_321342.1) From Anabaena Variabilis Atcc 29413 At
           1.90 A Resolution
 pdb|3CCF|B Chain B, Crystal Structure Of Putative Methyltransferase
           (Yp_321342.1) From Anabaena Variabilis Atcc 29413 At
           1.90 A Resolution
          Length = 279

 Score = 37.7 bits (86), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 23/151 (15%)

Query: 26  TSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEH 85
           T+K  WD   T+     SF W     Q  + L+ L+      P   IL  GCG  +L+E 
Sbjct: 25  TAKNFWDA--TLYQDKHSFVW-----QYGEDLLQLL---NPQPGEFILDLGCGTGQLTEK 74

Query: 86  LYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLD 145
           +  +G   +   D +   I +  R+N      + + V D  + + +D+  D +     L 
Sbjct: 75  IAQSGAE-VLGTDNAATXI-EKARQNY---PHLHFDVADARNFR-VDKPLDAVFSNAXLH 128

Query: 146 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVC 176
            + EPE         ++ + + LKSGG+FV 
Sbjct: 129 WVKEPEAA-------IASIHQALKSGGRFVA 152


>pdb|3CGG|A Chain A, Crystal Structure Of Tehb-Like Sam-Dependent
           Methyltransferase (Np_600671.1) From Corynebacterium
           Glutamicum Atcc 13032 Kitasato At 2.00 A Resolution
 pdb|3CGG|B Chain B, Crystal Structure Of Tehb-Like Sam-Dependent
           Methyltransferase (Np_600671.1) From Corynebacterium
           Glutamicum Atcc 13032 Kitasato At 2.00 A Resolution
          Length = 195

 Score = 37.0 bits (84), Expect = 0.031,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 9/105 (8%)

Query: 71  QILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQF 130
           +IL  GCG  R+  +L   G H +   D   ++I D  ++   D  + RW V D++  Q 
Sbjct: 49  KILDAGCGQGRIGGYLSKQG-HDVLGTDLDPILI-DYAKQ---DFPEARWVVGDLSVDQI 103

Query: 131 MDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFV 175
            +  FD+I+  G +   +  E G +     L+ + R L + G+ V
Sbjct: 104 SETDFDLIVSAGNVXGFL-AEDGREPA---LANIHRALGADGRAV 144


>pdb|3J1S|H Chain H, Structure Of Adeno-Associated Virus-2 In Complex With
           Neutralizing Monoclonal Antibody A20
          Length = 218

 Score = 32.7 bits (73), Expect = 0.60,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 3/54 (5%)

Query: 27  SKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNS 80
           + E+   ++  RG    +EW+  W Q    L+++  A T+ P    L PGCG++
Sbjct: 88  TTEDTATYYCARG-DYGYEWFTYWGQ--GTLVTVSAAKTTPPSVYPLAPGCGDT 138


>pdb|2XVA|A Chain A, Crystal Structure Of The Tellurite Detoxification Protein
           Tehb From E. Coli In Complex With Sinefungin
 pdb|2XVA|B Chain B, Crystal Structure Of The Tellurite Detoxification Protein
           Tehb From E. Coli In Complex With Sinefungin
 pdb|2XVA|C Chain C, Crystal Structure Of The Tellurite Detoxification Protein
           Tehb From E. Coli In Complex With Sinefungin
 pdb|2XVA|D Chain D, Crystal Structure Of The Tellurite Detoxification Protein
           Tehb From E. Coli In Complex With Sinefungin
 pdb|2XVM|A Chain A, Crystal Structure Of The Tellurite Detoxification Protein
           Tehb From E. Coli In Complex With Sah
 pdb|2XVM|B Chain B, Crystal Structure Of The Tellurite Detoxification Protein
           Tehb From E. Coli In Complex With Sah
          Length = 199

 Score = 32.3 bits (72), Expect = 0.84,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 3/72 (4%)

Query: 69  PPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLR-RNVRDRSDMRWRVMDMTS 127
           P + L  GCGN R S +L   G+  +   D + + I+++ R +++ +  ++  RV+D+ +
Sbjct: 33  PGKTLDLGCGNGRNSLYLAANGYD-VDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNN 91

Query: 128 MQFMDETFDVIL 139
           + F D  +D IL
Sbjct: 92  LTF-DRQYDFIL 102


>pdb|1AHP|A Chain A, Oligosaccharide Substrate Binding In Escherichia Coli
           Maltodextrin Phsphorylase
 pdb|1AHP|B Chain B, Oligosaccharide Substrate Binding In Escherichia Coli
           Maltodextrin Phsphorylase
          Length = 797

 Score = 31.6 bits (70), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 14/80 (17%)

Query: 373 MDEIQKDLSPLVKQLAPGKDDQGAQIPFMMAGDGIKHRNVVHQATSSLTGPIIVE----- 427
           ++EI      LV++  PG +   A++        + H   VH A   + G   V      
Sbjct: 372 INEINTRFKTLVEKTWPGDEKVWAKL-------AVVHDKQVHMANLCVVGGFAVNGVAAL 424

Query: 428 --DLVYENVDPEFSRIWPSE 445
             DLV +++ PE+ ++WP++
Sbjct: 425 HSDLVVKDLFPEYHQLWPNK 444


>pdb|2ECP|A Chain A, The Crystal Structure Of The E. Coli Maltodextrin
           Phosphorylase Complex
 pdb|2ECP|B Chain B, The Crystal Structure Of The E. Coli Maltodextrin
           Phosphorylase Complex
          Length = 796

 Score = 31.6 bits (70), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 14/80 (17%)

Query: 373 MDEIQKDLSPLVKQLAPGKDDQGAQIPFMMAGDGIKHRNVVHQATSSLTGPIIVE----- 427
           ++EI      LV++  PG +   A++        + H   VH A   + G   V      
Sbjct: 371 INEINTRFKTLVEKTWPGDEKVWAKL-------AVVHDKQVHMANLCVVGGFAVNGVAAL 423

Query: 428 --DLVYENVDPEFSRIWPSE 445
             DLV +++ PE+ ++WP++
Sbjct: 424 HSDLVVKDLFPEYHQLWPNK 443


>pdb|1QM5|A Chain A, Phosphorylase Recognition And Phosphorylysis Of Its
           Oligosaccharide Substrate: Answers To A Long Outstanding
           Question
 pdb|1QM5|B Chain B, Phosphorylase Recognition And Phosphorylysis Of Its
           Oligosaccharide Substrate: Answers To A Long Outstanding
           Question
 pdb|1E4O|A Chain A, Phosphorylase Recognition And Phosphorolysis Of Its
           Oligosaccharide Substrate: Answers To A Long Outstanding
           Question
 pdb|1E4O|B Chain B, Phosphorylase Recognition And Phosphorolysis Of Its
           Oligosaccharide Substrate: Answers To A Long Outstanding
           Question
          Length = 796

 Score = 31.6 bits (70), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 14/80 (17%)

Query: 373 MDEIQKDLSPLVKQLAPGKDDQGAQIPFMMAGDGIKHRNVVHQATSSLTGPIIVE----- 427
           ++EI      LV++  PG +   A++        + H   VH A   + G   V      
Sbjct: 371 INEINTRFKTLVEKTWPGDEKVWAKL-------AVVHDKQVHMANLCVVGGFAVNGVAAL 423

Query: 428 --DLVYENVDPEFSRIWPSE 445
             DLV +++ PE+ ++WP++
Sbjct: 424 HSDLVVKDLFPEYHQLWPNK 443


>pdb|1L5V|A Chain A, Crystal Structure Of The Maltodextrin Phosphorylase
           Complexed With Glucose-1-Phosphate
 pdb|1L5V|B Chain B, Crystal Structure Of The Maltodextrin Phosphorylase
           Complexed With Glucose-1-Phosphate
 pdb|1L5W|A Chain A, Crystal Structure Of The Maltodextrin Phosphorylase
           Complexed With The Products Of The Enzymatic Reaction
           Between Glucose-1-Phosphate And Maltotetraose
 pdb|1L5W|B Chain B, Crystal Structure Of The Maltodextrin Phosphorylase
           Complexed With The Products Of The Enzymatic Reaction
           Between Glucose-1-Phosphate And Maltotetraose
 pdb|1L6I|A Chain A, Crystal Structure Of The Maltodextrin Phosphorylase
           Complexed With The Products Of The Enzymatic Reaction
           Between Glucose-1-Phosphate And Maltopentaose
 pdb|1L6I|B Chain B, Crystal Structure Of The Maltodextrin Phosphorylase
           Complexed With The Products Of The Enzymatic Reaction
           Between Glucose-1-Phosphate And Maltopentaose
 pdb|2ASV|A Chain A, X-Ray Studies On Protein Complexes: Enzymatic Catalysis In
           Crystals Of E. Coli Maltodextrin Phosphorylase (Malp)
 pdb|2ASV|B Chain B, X-Ray Studies On Protein Complexes: Enzymatic Catalysis In
           Crystals Of E. Coli Maltodextrin Phosphorylase (Malp)
 pdb|2AV6|A Chain A, X-Ray Studies On Maltodextrin Phosphorylase Complexes:
           Recognition Of Substrates And Cathalitic Mechanism Of
           Phosphorylase Family
 pdb|2AV6|B Chain B, X-Ray Studies On Maltodextrin Phosphorylase Complexes:
           Recognition Of Substrates And Cathalitic Mechanism Of
           Phosphorylase Family
 pdb|2AW3|A Chain A, X-Ray Studies On Maltodextrin Phosphorylase Complexes:
           Recognition Of Substrates And Cathalitic Mechanism Of
           Phosphorylase Family
 pdb|2AW3|B Chain B, X-Ray Studies On Maltodextrin Phosphorylase Complexes:
           Recognition Of Substrates And Cathalitic Mechanism Of
           Phosphorylase Family
 pdb|2AZD|A Chain A, X-Ray Studies On Maltodextrin Phosphorylase (Malp)
           Complexes: Recognition Of Substrates And Catalytic
           Mechanism Of Phosphorylase Family
 pdb|2AZD|B Chain B, X-Ray Studies On Maltodextrin Phosphorylase (Malp)
           Complexes: Recognition Of Substrates And Catalytic
           Mechanism Of Phosphorylase Family
          Length = 796

 Score = 31.6 bits (70), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 14/80 (17%)

Query: 373 MDEIQKDLSPLVKQLAPGKDDQGAQIPFMMAGDGIKHRNVVHQATSSLTGPIIVE----- 427
           ++EI      LV++  PG +   A++        + H   VH A   + G   V      
Sbjct: 371 INEINTRFKTLVEKTWPGDEKVWAKL-------AVVHDKQVHMANLCVVGGFAVNGVAAL 423

Query: 428 --DLVYENVDPEFSRIWPSE 445
             DLV +++ PE+ ++WP++
Sbjct: 424 HSDLVVKDLFPEYHQLWPNK 443


>pdb|2H6L|A Chain A, X-Ray Crystal Structure Of The Metal-Containing Protein
           Af0104 From Archaeoglobus Fulgidus. Northeast Structural
           Genomics Consortium Target Gr103.
 pdb|2H6L|B Chain B, X-Ray Crystal Structure Of The Metal-Containing Protein
           Af0104 From Archaeoglobus Fulgidus. Northeast Structural
           Genomics Consortium Target Gr103.
 pdb|2H6L|C Chain C, X-Ray Crystal Structure Of The Metal-Containing Protein
           Af0104 From Archaeoglobus Fulgidus. Northeast Structural
           Genomics Consortium Target Gr103
          Length = 146

 Score = 31.6 bits (70), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 11/96 (11%)

Query: 258 NQTRREYSHGSDILYSLEDLQLGAKGDMKNLSPGCRFELILGGEGDFCFSYRAVLLDARE 317
           +Q ++EY    ++   LE L L      K+  P C   ++LG +G+    Y   L  A  
Sbjct: 55  DQEKKEYVK-KELXEPLEILSLSGNVSXKDSKPFCHIHVLLGKDGEV---YGGHLFSAE- 109

Query: 318 NSGPFMYNCGVFIVPKT-RAHEWLFSSEEGQWLVVE 352
                ++ C VF++P +  A E  F  + G +L +E
Sbjct: 110 -----VFACEVFVLPLSGEAPERAFDEQTGLFLWLE 140


>pdb|4DQ0|A Chain A, The Crystal Structure Of Tellurite Resistance Protein From
           Escherichia Coli O157:h7 Str. Sakai
 pdb|4DQ0|B Chain B, The Crystal Structure Of Tellurite Resistance Protein From
           Escherichia Coli O157:h7 Str. Sakai
 pdb|4DQ0|C Chain C, The Crystal Structure Of Tellurite Resistance Protein From
           Escherichia Coli O157:h7 Str. Sakai
 pdb|4DQ0|D Chain D, The Crystal Structure Of Tellurite Resistance Protein From
           Escherichia Coli O157:h7 Str. Sakai
          Length = 200

 Score = 31.6 bits (70), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 3/72 (4%)

Query: 69  PPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLR-RNVRDRSDMRWRVMDMTS 127
           P + L  GCGN R S +L   G+  +   D + + I+++ R +++ +  ++  RV+D+ +
Sbjct: 34  PGKTLDLGCGNGRNSLYLAANGYD-VDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNN 92

Query: 128 MQFMDETFDVIL 139
           + F D  +D IL
Sbjct: 93  LTF-DGEYDFIL 103


>pdb|4DCQ|B Chain B, Crystal Structure Of The Fab Fragment Of 3b5h10, An
           Antibody-Specific For Extended Polyglutamine Repeats
           (Orthorhombic Form)
          Length = 218

 Score = 31.2 bits (69), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)

Query: 34  FFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPG 76
           +F  RG G++F W+A W Q    L+++  A T+ P    L PG
Sbjct: 94  YFCARG-GNNFLWFAYWGQ--GTLVTVSAAKTTPPSVYPLAPG 133


>pdb|1CBV|H Chain H, An Autoantibody To Single-Stranded Dna: Comparison Of The
           Three-Dimensional Structures Of The Unliganded Fab And A
           Deoxynucleotide-Fab Complex
 pdb|1NBV|H Chain H, An Autoantibody To Single-Stranded Dna: Comparison Of The
           Three-Dimensional Structures Of The Unliganded Fab And A
           Deoxynucleotide-Fab Complex
          Length = 219

 Score = 30.8 bits (68), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)

Query: 46  WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNS 80
           W+A W Q    L+++  A T+ P    L PGCG++
Sbjct: 107 WFAYWGQ--GTLVTVSAAKTTPPSVYPLAPGCGDT 139


>pdb|2VPW|A Chain A, Polysulfide Reductase With Bound Menaquinone
 pdb|2VPW|E Chain E, Polysulfide Reductase With Bound Menaquinone
 pdb|2VPX|A Chain A, Polysulfide Reductase With Bound Quinone (uq1)
 pdb|2VPX|E Chain E, Polysulfide Reductase With Bound Quinone (uq1)
 pdb|2VPY|A Chain A, Polysulfide Reductase With Bound Quinone Inhibitor,
           Pentachlorophenol (Pcp)
 pdb|2VPY|E Chain E, Polysulfide Reductase With Bound Quinone Inhibitor,
           Pentachlorophenol (Pcp)
 pdb|2VPZ|A Chain A, Polysulfide Reductase Native Structure
 pdb|2VPZ|E Chain E, Polysulfide Reductase Native Structure
          Length = 765

 Score = 30.4 bits (67), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 16/111 (14%)

Query: 329 FIVPKTRAHEWLFSSEEGQWLV--------VESSKAARLIMVLLDTSHASASMD-EIQKD 379
           FI  +T AHE LF ++ G W+         +E     + I   L+T   S  +D E  K 
Sbjct: 501 FIQLRTPAHEPLFDTKPGWWIARELGLRLGLEQYFPWKTIEEYLETRLQSLGLDLETMKG 560

Query: 380 LSPLVKQLAPGKDD--QGAQIPFMMAGDGI-----KHRNVVHQATSSLTGP 423
           +  LV++  P  +D  +  ++PF  A   I     + +   HQ     T P
Sbjct: 561 MGTLVQRGKPWLEDWEKEGRLPFGTASGKIELYCQRFKEAGHQPLPVFTPP 611


>pdb|3S96|A Chain A, Crystal Structure Of 3b5h10
 pdb|3S96|C Chain C, Crystal Structure Of 3b5h10
          Length = 220

 Score = 28.9 bits (63), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)

Query: 34  FFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPG 76
           +F  RG GD++ W+A W Q    L+++  A T+ P    L PG
Sbjct: 94  YFCARG-GDNYLWFAYWGQ--GTLVTVSAAKTTPPSVYPLAPG 133


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.320    0.136    0.403 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,122,393
Number of Sequences: 62578
Number of extensions: 717346
Number of successful extensions: 1535
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1531
Number of HSP's gapped (non-prelim): 18
length of query: 659
length of database: 14,973,337
effective HSP length: 105
effective length of query: 554
effective length of database: 8,402,647
effective search space: 4655066438
effective search space used: 4655066438
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)