Query 006149
Match_columns 659
No_of_seqs 616 out of 3365
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 17:18:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006149.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006149hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pxx_A Uncharacterized protein 99.9 7E-21 2.4E-25 187.5 17.3 190 24-225 3-200 (215)
2 2gb4_A Thiopurine S-methyltran 99.8 7.9E-19 2.7E-23 179.6 16.8 143 26-179 31-192 (252)
3 3o4f_A Spermidine synthase; am 99.8 5.1E-18 1.7E-22 175.9 15.0 116 515-642 66-222 (294)
4 3kkz_A Uncharacterized protein 99.7 1.5E-17 5E-22 170.5 12.3 201 50-267 30-246 (267)
5 1pjz_A Thiopurine S-methyltran 99.7 1.3E-17 4.4E-22 164.7 8.6 107 67-179 21-141 (203)
6 3f4k_A Putative methyltransfer 99.7 6.3E-17 2.1E-21 164.2 13.0 200 50-266 30-245 (257)
7 3gjy_A Spermidine synthase; AP 99.7 1E-16 3.4E-21 168.5 14.9 125 510-643 62-224 (317)
8 2xvm_A Tellurite resistance pr 99.7 1.7E-15 5.9E-20 147.0 16.8 132 25-179 5-137 (199)
9 4gek_A TRNA (CMO5U34)-methyltr 99.6 1.2E-15 4E-20 156.9 13.4 107 67-180 69-180 (261)
10 3sm3_A SAM-dependent methyltra 99.6 1.2E-15 4.1E-20 151.9 13.1 139 27-183 2-146 (235)
11 3ofk_A Nodulation protein S; N 99.6 1.2E-15 4.3E-20 150.7 12.8 142 27-181 13-157 (216)
12 3lcc_A Putative methyl chlorid 99.6 2E-15 7E-20 151.4 13.2 139 27-181 32-174 (235)
13 3c6k_A Spermine synthase; sper 99.6 3.4E-15 1.2E-19 159.2 15.5 113 516-642 190-354 (381)
14 4hg2_A Methyltransferase type 99.6 1.7E-15 6E-20 155.2 12.7 112 52-182 28-139 (257)
15 2o57_A Putative sarcosine dime 99.6 2.4E-15 8.2E-20 156.3 13.9 107 67-181 81-190 (297)
16 2ex4_A Adrenal gland protein A 99.6 9E-16 3.1E-20 154.7 10.0 108 68-180 79-187 (241)
17 3dlc_A Putative S-adenosyl-L-m 99.6 5.1E-15 1.7E-19 145.6 14.2 135 28-180 14-150 (219)
18 2p7i_A Hypothetical protein; p 99.6 1.8E-15 6.3E-20 151.7 11.1 104 68-183 42-146 (250)
19 3thr_A Glycine N-methyltransfe 99.6 3.4E-15 1.2E-19 154.7 12.6 157 16-184 16-181 (293)
20 3g5l_A Putative S-adenosylmeth 99.6 7.8E-15 2.7E-19 148.7 14.8 112 57-180 36-147 (253)
21 1xtp_A LMAJ004091AAA; SGPP, st 99.6 1.8E-15 6.2E-20 153.0 10.0 107 67-179 92-198 (254)
22 3hnr_A Probable methyltransfer 99.6 5.5E-15 1.9E-19 146.3 13.2 104 67-180 44-147 (220)
23 1vl5_A Unknown conserved prote 99.6 5.8E-15 2E-19 150.4 13.6 113 57-180 29-142 (260)
24 2a14_A Indolethylamine N-methy 99.6 1.3E-15 4.6E-20 156.1 8.9 150 24-179 14-198 (263)
25 3l8d_A Methyltransferase; stru 99.6 4.5E-15 1.5E-19 149.0 12.3 115 52-181 42-156 (242)
26 3h2b_A SAM-dependent methyltra 99.6 2.9E-15 9.9E-20 146.6 10.3 115 54-182 31-145 (203)
27 3bus_A REBM, methyltransferase 99.6 8.8E-15 3E-19 149.8 14.1 107 67-180 60-168 (273)
28 2kw5_A SLR1183 protein; struct 99.6 3E-15 1E-19 146.4 9.4 136 30-183 1-136 (202)
29 3g5t_A Trans-aconitate 3-methy 99.6 7.8E-15 2.7E-19 152.9 13.1 118 52-181 24-152 (299)
30 1nkv_A Hypothetical protein YJ 99.6 1.8E-14 6.3E-19 145.9 14.5 119 50-179 21-141 (256)
31 3dtn_A Putative methyltransfer 99.6 2.9E-14 1E-18 142.6 15.2 123 50-181 28-151 (234)
32 3ujc_A Phosphoethanolamine N-m 99.6 1.8E-14 6.1E-19 146.3 13.2 109 66-181 53-162 (266)
33 3ou2_A SAM-dependent methyltra 99.6 1.9E-14 6.6E-19 141.7 13.0 114 56-181 36-149 (218)
34 3cgg_A SAM-dependent methyltra 99.6 6.9E-14 2.4E-18 134.7 16.4 104 68-181 46-150 (195)
35 3dli_A Methyltransferase; PSI- 99.6 1.2E-14 4.2E-19 146.3 11.5 135 26-183 9-145 (240)
36 1xxl_A YCGJ protein; structura 99.6 2.8E-14 9.4E-19 143.8 14.0 116 55-181 11-127 (239)
37 3ggd_A SAM-dependent methyltra 99.5 3E-14 1E-18 143.7 13.8 146 27-182 15-167 (245)
38 2gs9_A Hypothetical protein TT 99.5 1.7E-14 5.7E-19 142.0 11.6 102 68-183 36-137 (211)
39 3jwh_A HEN1; methyltransferase 99.5 3.9E-14 1.3E-18 140.3 14.3 118 54-179 18-142 (217)
40 2i62_A Nicotinamide N-methyltr 99.5 9.4E-15 3.2E-19 148.5 10.0 149 24-180 15-200 (265)
41 1ve3_A Hypothetical protein PH 99.5 2.8E-14 9.5E-19 141.6 12.9 110 68-183 38-147 (227)
42 3pfg_A N-methyltransferase; N, 99.5 1.7E-14 5.9E-19 147.1 11.7 134 28-180 19-153 (263)
43 2p8j_A S-adenosylmethionine-de 99.5 2.5E-14 8.4E-19 140.3 12.4 109 67-181 22-131 (209)
44 1y8c_A S-adenosylmethionine-de 99.5 5.2E-14 1.8E-18 141.0 15.0 126 49-181 19-145 (246)
45 3m70_A Tellurite resistance pr 99.5 7.1E-14 2.4E-18 144.4 16.4 105 68-179 120-224 (286)
46 1wzn_A SAM-dependent methyltra 99.5 3.9E-14 1.3E-18 143.3 14.0 137 28-179 9-146 (252)
47 3e23_A Uncharacterized protein 99.5 6.6E-14 2.3E-18 137.8 15.2 101 68-180 43-143 (211)
48 3dh0_A SAM dependent methyltra 99.5 1.8E-14 6.1E-19 142.5 11.0 114 57-180 29-145 (219)
49 3jwg_A HEN1, methyltransferase 99.5 4.1E-14 1.4E-18 140.1 13.6 118 54-179 18-142 (219)
50 2yqz_A Hypothetical protein TT 99.5 4.8E-14 1.6E-18 143.1 14.4 103 67-177 38-140 (263)
51 3g2m_A PCZA361.24; SAM-depende 99.5 1.1E-14 3.7E-19 151.8 9.8 122 52-184 70-196 (299)
52 3bkw_A MLL3908 protein, S-aden 99.5 3.3E-14 1.1E-18 142.5 13.0 113 56-180 34-146 (243)
53 3ege_A Putative methyltransfer 99.5 2E-14 7E-19 146.8 11.4 117 50-183 19-135 (261)
54 3mgg_A Methyltransferase; NYSG 99.5 3.9E-14 1.3E-18 145.4 12.7 107 67-180 36-144 (276)
55 3ccf_A Cyclopropane-fatty-acyl 99.5 5.6E-14 1.9E-18 144.8 13.4 110 57-182 49-158 (279)
56 3i9f_A Putative type 11 methyl 99.5 9.1E-14 3.1E-18 131.9 13.4 100 67-181 16-115 (170)
57 4htf_A S-adenosylmethionine-de 99.5 6.5E-14 2.2E-18 144.6 13.3 106 68-181 68-176 (285)
58 1zx0_A Guanidinoacetate N-meth 99.5 3.2E-14 1.1E-18 143.1 9.7 111 67-180 59-172 (236)
59 2vdw_A Vaccinia virus capping 99.5 3.9E-14 1.3E-18 148.6 10.4 112 68-183 48-174 (302)
60 2avn_A Ubiquinone/menaquinone 99.5 9.5E-14 3.3E-18 141.7 12.8 113 52-181 43-155 (260)
61 3vc1_A Geranyl diphosphate 2-C 99.5 1.3E-13 4.3E-18 144.7 13.8 107 66-181 115-224 (312)
62 2g72_A Phenylethanolamine N-me 99.5 7E-14 2.4E-18 144.9 11.5 157 17-178 22-215 (289)
63 3gu3_A Methyltransferase; alph 99.5 1.8E-13 6.3E-18 141.6 14.3 106 67-180 21-128 (284)
64 3mti_A RRNA methylase; SAM-dep 99.5 4.7E-13 1.6E-17 128.9 15.7 113 67-180 21-137 (185)
65 1ri5_A MRNA capping enzyme; me 99.5 9.7E-14 3.3E-18 143.5 11.5 114 67-183 63-179 (298)
66 3d2l_A SAM-dependent methyltra 99.5 2.8E-13 9.4E-18 135.8 14.4 120 50-181 20-140 (243)
67 3bxo_A N,N-dimethyltransferase 99.5 2.1E-13 7.1E-18 136.3 13.2 134 28-180 9-143 (239)
68 2p35_A Trans-aconitate 2-methy 99.5 2.5E-13 8.6E-18 137.6 13.6 102 67-180 32-134 (259)
69 3hem_A Cyclopropane-fatty-acyl 99.5 4.8E-13 1.6E-17 139.5 15.5 113 66-182 70-187 (302)
70 1kpg_A CFA synthase;, cyclopro 99.5 6.1E-13 2.1E-17 137.3 16.0 107 66-181 62-171 (287)
71 3eey_A Putative rRNA methylase 99.5 1.5E-12 5.2E-17 126.6 17.6 156 67-226 21-191 (197)
72 3e05_A Precorrin-6Y C5,15-meth 99.5 1.3E-12 4.3E-17 128.2 17.2 119 50-181 25-145 (204)
73 3iv6_A Putative Zn-dependent a 99.5 2.2E-13 7.5E-18 139.7 11.6 111 54-179 34-149 (261)
74 3evz_A Methyltransferase; NYSG 99.5 3.2E-12 1.1E-16 127.4 19.7 137 67-203 54-205 (230)
75 3orh_A Guanidinoacetate N-meth 99.4 9.2E-14 3.1E-18 140.3 8.0 114 54-178 50-170 (236)
76 2fk8_A Methoxy mycolic acid sy 99.4 8.8E-13 3E-17 138.4 15.7 108 66-182 88-198 (318)
77 3fpf_A Mtnas, putative unchara 99.4 1.7E-12 5.9E-17 134.8 17.3 148 43-205 100-251 (298)
78 1vbf_A 231AA long hypothetical 99.4 3.3E-13 1.1E-17 134.8 11.6 136 25-180 28-167 (231)
79 1vlm_A SAM-dependent methyltra 99.4 5.1E-13 1.7E-17 132.6 12.4 96 69-182 48-143 (219)
80 3lbf_A Protein-L-isoaspartate 99.4 3.5E-13 1.2E-17 132.5 11.0 139 25-180 37-176 (210)
81 3e8s_A Putative SAM dependent 99.4 2.8E-13 9.5E-18 133.8 10.3 101 67-181 51-155 (227)
82 3njr_A Precorrin-6Y methylase; 99.4 2.7E-12 9.2E-17 126.6 16.9 117 51-183 41-159 (204)
83 2aot_A HMT, histamine N-methyl 99.4 2.6E-13 8.7E-18 141.1 10.0 108 67-181 51-175 (292)
84 1nt2_A Fibrillarin-like PRE-rR 99.4 1.1E-12 3.6E-17 130.3 13.4 114 53-178 43-161 (210)
85 3p9n_A Possible methyltransfer 99.4 4.7E-13 1.6E-17 129.8 10.5 108 68-181 44-156 (189)
86 1iy9_A Spermidine synthase; ro 99.4 1.4E-12 4.8E-17 134.8 14.6 116 515-643 58-214 (275)
87 4fsd_A Arsenic methyltransfera 99.4 4.7E-13 1.6E-17 144.8 11.3 107 67-180 82-205 (383)
88 1l3i_A Precorrin-6Y methyltran 99.4 8.8E-13 3E-17 126.6 11.9 118 51-183 19-139 (192)
89 3g07_A 7SK snRNA methylphospha 99.4 3.5E-13 1.2E-17 140.3 9.3 110 68-178 46-220 (292)
90 2qfm_A Spermine synthase; sper 99.4 2.4E-12 8.3E-17 136.8 15.8 115 516-644 173-339 (364)
91 2yxd_A Probable cobalt-precorr 99.4 3.1E-12 1.1E-16 121.9 14.6 133 51-202 21-155 (183)
92 3bgv_A MRNA CAP guanine-N7 met 99.4 1E-12 3.5E-17 137.7 12.2 113 68-184 34-161 (313)
93 3ocj_A Putative exported prote 99.4 5.9E-13 2E-17 139.2 10.3 111 67-182 117-231 (305)
94 1dus_A MJ0882; hypothetical pr 99.4 3.1E-12 1.1E-16 122.9 14.4 120 52-182 39-161 (194)
95 3m33_A Uncharacterized protein 99.4 1.6E-12 5.6E-17 129.7 12.8 90 68-175 48-139 (226)
96 3hm2_A Precorrin-6Y C5,15-meth 99.4 3.7E-12 1.3E-16 121.3 14.5 117 51-183 11-132 (178)
97 3q7e_A Protein arginine N-meth 99.4 5.6E-13 1.9E-17 142.5 9.6 104 68-176 66-171 (349)
98 3cc8_A Putative methyltransfer 99.4 1.3E-12 4.4E-17 129.3 10.1 109 56-182 24-134 (230)
99 2fyt_A Protein arginine N-meth 99.4 3E-12 1E-16 136.4 13.6 115 53-175 52-168 (340)
100 3grz_A L11 mtase, ribosomal pr 99.4 3.3E-12 1.1E-16 125.2 12.8 104 67-182 59-163 (205)
101 1fbn_A MJ fibrillarin homologu 99.4 4.1E-12 1.4E-16 127.3 13.8 106 61-177 67-177 (230)
102 1af7_A Chemotaxis receptor met 99.4 3E-12 1E-16 132.2 12.9 141 28-177 69-251 (274)
103 4df3_A Fibrillarin-like rRNA/T 99.4 5.5E-12 1.9E-16 127.0 14.3 124 46-179 55-183 (233)
104 3bkx_A SAM-dependent methyltra 99.4 3.1E-12 1.1E-16 130.9 12.6 116 56-181 34-162 (275)
105 2ift_A Putative methylase HI07 99.4 1.8E-12 6.2E-17 127.4 10.1 106 68-181 53-166 (201)
106 2frn_A Hypothetical protein PH 99.3 6.2E-12 2.1E-16 130.1 14.3 121 44-181 106-228 (278)
107 1p91_A Ribosomal RNA large sub 99.3 3E-12 1E-16 130.9 11.6 99 68-184 85-184 (269)
108 3htx_A HEN1; HEN1, small RNA m 99.3 3.9E-12 1.3E-16 146.2 13.5 116 56-180 712-836 (950)
109 3q87_B N6 adenine specific DNA 99.3 1E-11 3.6E-16 118.6 14.2 101 68-180 23-125 (170)
110 1yzh_A TRNA (guanine-N(7)-)-me 99.3 8.8E-12 3E-16 123.3 14.1 113 68-180 41-158 (214)
111 2fca_A TRNA (guanine-N(7)-)-me 99.3 4.6E-12 1.6E-16 125.7 12.0 113 68-180 38-155 (213)
112 3gdh_A Trimethylguanosine synt 99.3 2.6E-13 9E-18 136.5 2.9 142 25-177 30-180 (241)
113 3dmg_A Probable ribosomal RNA 99.3 5.3E-12 1.8E-16 136.5 13.2 111 68-181 233-343 (381)
114 2yxe_A Protein-L-isoaspartate 99.3 2.6E-12 9E-17 126.7 9.9 138 25-180 37-179 (215)
115 2ipx_A RRNA 2'-O-methyltransfe 99.3 8.3E-12 2.8E-16 125.1 13.5 114 56-179 65-183 (233)
116 2esr_A Methyltransferase; stru 99.3 3.4E-12 1.2E-16 122.0 9.9 121 53-183 18-143 (177)
117 3r0q_C Probable protein argini 99.3 5.3E-12 1.8E-16 136.3 12.2 106 67-178 62-169 (376)
118 3dxy_A TRNA (guanine-N(7)-)-me 99.3 3.2E-12 1.1E-16 127.6 9.7 115 68-182 34-154 (218)
119 3fzg_A 16S rRNA methylase; met 99.3 9.8E-12 3.4E-16 120.5 12.3 118 48-178 34-152 (200)
120 2qe6_A Uncharacterized protein 99.3 1.6E-11 5.4E-16 126.8 14.8 108 68-181 77-199 (274)
121 2pwy_A TRNA (adenine-N(1)-)-me 99.3 3.6E-11 1.2E-15 121.7 17.1 118 50-182 81-202 (258)
122 3ckk_A TRNA (guanine-N(7)-)-me 99.3 3.8E-12 1.3E-16 128.5 9.8 113 68-180 46-170 (235)
123 1jg1_A PIMT;, protein-L-isoasp 99.3 5.2E-12 1.8E-16 126.9 10.6 138 24-180 50-191 (235)
124 2y1w_A Histone-arginine methyl 99.3 1.2E-11 4.2E-16 132.0 13.8 115 53-177 38-154 (348)
125 1xdz_A Methyltransferase GIDB; 99.3 8.3E-12 2.9E-16 125.8 11.8 101 68-179 70-175 (240)
126 2zfu_A Nucleomethylin, cerebra 99.3 1.3E-11 4.5E-16 121.6 12.9 128 67-227 66-195 (215)
127 3lpm_A Putative methyltransfer 99.3 3.3E-11 1.1E-15 122.9 16.3 122 56-180 39-178 (259)
128 1g6q_1 HnRNP arginine N-methyl 99.3 1.2E-11 4.2E-16 130.9 13.5 104 68-176 38-143 (328)
129 3uwp_A Histone-lysine N-methyl 99.3 7.6E-12 2.6E-16 134.7 11.7 116 55-181 163-291 (438)
130 2fhp_A Methylase, putative; al 99.3 6.7E-12 2.3E-16 120.4 10.1 124 50-183 28-159 (187)
131 2fpo_A Methylase YHHF; structu 99.3 6E-12 2.1E-16 123.7 9.9 119 52-180 40-162 (202)
132 3g89_A Ribosomal RNA small sub 99.3 1.5E-11 5.1E-16 125.3 13.0 102 67-179 79-185 (249)
133 1ej0_A FTSJ; methyltransferase 99.3 1.5E-11 5.3E-16 115.8 12.2 107 67-183 21-141 (180)
134 2plw_A Ribosomal RNA methyltra 99.3 2.2E-11 7.6E-16 118.6 13.5 106 67-182 21-158 (201)
135 4e2x_A TCAB9; kijanose, tetron 99.3 1E-12 3.4E-17 143.4 4.3 116 53-180 95-210 (416)
136 1ws6_A Methyltransferase; stru 99.3 4E-12 1.4E-16 120.0 7.8 121 52-183 26-152 (171)
137 2i7c_A Spermidine synthase; tr 99.3 3.8E-11 1.3E-15 124.6 15.6 116 515-642 61-216 (283)
138 3adn_A Spermidine synthase; am 99.3 4.8E-12 1.6E-16 132.1 8.7 117 515-643 66-223 (294)
139 2r3s_A Uncharacterized protein 99.3 2.3E-11 7.9E-16 128.3 13.8 107 68-181 165-274 (335)
140 3dp7_A SAM-dependent methyltra 99.3 1.8E-11 6.1E-16 131.4 12.7 106 68-180 179-289 (363)
141 3tma_A Methyltransferase; thum 99.3 6.7E-11 2.3E-15 126.4 17.1 160 52-222 190-353 (354)
142 4dcm_A Ribosomal RNA large sub 99.3 2.7E-11 9.3E-16 130.7 13.9 124 54-183 211-339 (375)
143 3id6_C Fibrillarin-like rRNA/T 99.3 3.5E-11 1.2E-15 121.2 13.8 120 50-179 58-182 (232)
144 1g8a_A Fibrillarin-like PRE-rR 99.3 4.4E-11 1.5E-15 119.1 14.3 123 46-178 51-178 (227)
145 1uir_A Polyamine aminopropyltr 99.3 1.6E-11 5.6E-16 129.2 11.5 99 515-625 60-195 (314)
146 3mq2_A 16S rRNA methyltransfer 99.3 1.5E-11 5.1E-16 121.7 10.2 104 67-178 26-140 (218)
147 3i53_A O-methyltransferase; CO 99.2 3.4E-11 1.2E-15 127.3 12.9 107 67-181 168-277 (332)
148 4azs_A Methyltransferase WBDD; 99.2 4.6E-12 1.6E-16 144.1 6.6 107 68-180 66-175 (569)
149 1i9g_A Hypothetical protein RV 99.2 3.4E-11 1.2E-15 123.7 12.3 118 51-183 85-208 (280)
150 3ntv_A MW1564 protein; rossman 99.2 2.8E-11 9.7E-16 121.4 11.3 115 52-179 58-177 (232)
151 2pjd_A Ribosomal RNA small sub 99.2 1.7E-11 5.8E-16 130.6 10.1 121 53-180 184-305 (343)
152 1yb2_A Hypothetical protein TA 99.2 3.7E-11 1.3E-15 123.7 12.2 102 67-181 109-214 (275)
153 2b2c_A Spermidine synthase; be 99.2 8.9E-11 3E-15 123.6 14.8 99 515-625 91-222 (314)
154 3dou_A Ribosomal RNA large sub 99.2 9.5E-11 3.2E-15 114.4 13.9 106 67-183 24-144 (191)
155 2nxc_A L11 mtase, ribosomal pr 99.2 4.3E-11 1.5E-15 122.0 12.0 103 67-181 119-221 (254)
156 1x19_A CRTF-related protein; m 99.2 8.4E-11 2.9E-15 125.7 14.5 107 67-181 189-298 (359)
157 4dzr_A Protein-(glutamine-N5) 99.2 6.6E-12 2.2E-16 122.8 5.3 125 53-180 17-166 (215)
158 2ozv_A Hypothetical protein AT 99.2 1.7E-10 5.8E-15 118.0 16.1 161 57-224 28-213 (260)
159 1mjf_A Spermidine synthase; sp 99.2 7.1E-11 2.4E-15 122.4 13.2 98 515-625 58-193 (281)
160 3gwz_A MMCR; methyltransferase 99.2 1E-10 3.5E-15 125.8 14.9 106 67-180 201-309 (369)
161 1jsx_A Glucose-inhibited divis 99.2 5.7E-11 1.9E-15 116.2 11.9 101 68-180 65-167 (207)
162 3sso_A Methyltransferase; macr 99.2 1.4E-11 4.9E-16 132.2 8.1 97 68-180 216-326 (419)
163 3mb5_A SAM-dependent methyltra 99.2 5.7E-11 1.9E-15 120.3 12.2 114 52-181 80-197 (255)
164 1i1n_A Protein-L-isoaspartate 99.2 5.7E-11 2E-15 118.1 11.9 114 53-180 63-184 (226)
165 2pbf_A Protein-L-isoaspartate 99.2 4.6E-11 1.6E-15 118.9 11.1 115 52-180 65-195 (227)
166 1dl5_A Protein-L-isoaspartate 99.2 4.2E-11 1.5E-15 126.0 11.3 113 51-179 61-176 (317)
167 1ne2_A Hypothetical protein TA 99.2 5.9E-11 2E-15 115.8 11.5 98 67-178 50-147 (200)
168 1wy7_A Hypothetical protein PH 99.2 2.1E-10 7.2E-15 112.3 15.4 121 47-177 28-148 (207)
169 3b3j_A Histone-arginine methyl 99.2 4.4E-11 1.5E-15 133.0 11.9 103 67-176 157-261 (480)
170 2b3t_A Protein methyltransfera 99.2 3.2E-11 1.1E-15 124.2 9.7 122 53-179 98-239 (276)
171 1qzz_A RDMB, aclacinomycin-10- 99.2 7.7E-11 2.6E-15 126.4 13.1 105 67-179 181-288 (374)
172 3dr5_A Putative O-methyltransf 99.2 5.2E-11 1.8E-15 119.0 10.4 102 68-179 56-164 (221)
173 3p2e_A 16S rRNA methylase; met 99.2 3.4E-11 1.2E-15 120.7 9.0 109 68-178 24-139 (225)
174 1u2z_A Histone-lysine N-methyl 99.2 5E-10 1.7E-14 122.4 18.7 116 52-178 229-359 (433)
175 2vdv_E TRNA (guanine-N(7)-)-me 99.2 7.9E-11 2.7E-15 119.2 11.5 108 68-180 49-175 (246)
176 3tfw_A Putative O-methyltransf 99.2 8.3E-11 2.8E-15 119.4 11.4 103 68-180 63-172 (248)
177 3u81_A Catechol O-methyltransf 99.2 3.5E-11 1.2E-15 119.6 8.4 118 53-181 46-173 (221)
178 2b25_A Hypothetical protein; s 99.2 1.1E-10 3.6E-15 123.8 12.7 119 50-183 90-224 (336)
179 4hc4_A Protein arginine N-meth 99.2 7.7E-11 2.6E-15 126.7 11.1 103 68-176 83-187 (376)
180 3mcz_A O-methyltransferase; ad 99.2 7.1E-11 2.4E-15 125.7 10.6 106 69-180 180-289 (352)
181 2gpy_A O-methyltransferase; st 99.2 9E-11 3.1E-15 117.4 10.5 118 49-179 38-161 (233)
182 1o9g_A RRNA methyltransferase; 99.2 8.7E-11 3E-15 119.0 10.4 113 68-180 51-216 (250)
183 2yvl_A TRMI protein, hypotheti 99.1 3.2E-10 1.1E-14 113.9 14.3 111 55-181 81-193 (248)
184 2nyu_A Putative ribosomal RNA 99.1 2.8E-10 9.5E-15 110.2 13.4 107 67-183 21-150 (196)
185 3adn_A Spermidine synthase; am 99.1 2.6E-10 8.8E-15 119.0 14.0 109 68-179 83-199 (294)
186 1tw3_A COMT, carminomycin 4-O- 99.1 1.6E-10 5.5E-15 123.3 12.8 106 67-180 182-290 (360)
187 3lec_A NADB-rossmann superfami 99.1 2.2E-10 7.6E-15 114.9 12.8 128 68-206 21-151 (230)
188 1r18_A Protein-L-isoaspartate( 99.1 9.9E-11 3.4E-15 116.7 10.2 115 51-180 68-196 (227)
189 3bzb_A Uncharacterized protein 99.1 2.3E-10 7.7E-15 118.4 13.3 105 67-178 78-205 (281)
190 1o54_A SAM-dependent O-methylt 99.1 1.9E-10 6.5E-15 118.4 12.6 111 55-181 102-216 (277)
191 2ip2_A Probable phenazine-spec 99.1 1.5E-10 5.1E-15 122.3 11.8 103 70-180 169-274 (334)
192 3tr6_A O-methyltransferase; ce 99.1 9.1E-11 3.1E-15 116.4 9.2 103 68-180 64-176 (225)
193 2f8l_A Hypothetical protein LM 99.1 1.3E-09 4.4E-14 116.0 18.6 157 67-225 129-307 (344)
194 3duw_A OMT, O-methyltransferas 99.1 1.5E-10 5E-15 114.9 10.1 103 68-180 58-169 (223)
195 2o07_A Spermidine synthase; st 99.1 3.7E-10 1.3E-14 118.3 13.5 99 515-625 78-209 (304)
196 3gnl_A Uncharacterized protein 99.1 3.8E-10 1.3E-14 114.2 12.7 125 68-203 21-148 (244)
197 2igt_A SAM dependent methyltra 99.1 2.4E-10 8.2E-15 121.3 11.6 132 46-180 133-274 (332)
198 2bm8_A Cephalosporin hydroxyla 99.1 8.9E-11 3E-15 118.5 7.9 112 51-179 67-188 (236)
199 1inl_A Spermidine synthase; be 99.1 5.2E-10 1.8E-14 116.8 13.8 116 515-642 73-229 (296)
200 3c3p_A Methyltransferase; NP_9 99.1 1.4E-10 4.9E-15 114.0 9.0 101 68-179 56-161 (210)
201 3lst_A CALO1 methyltransferase 99.1 1.3E-10 4.4E-15 123.8 9.1 103 67-180 183-288 (348)
202 1ixk_A Methyltransferase; open 99.1 3.3E-10 1.1E-14 119.3 12.0 122 56-180 109-248 (315)
203 3a27_A TYW2, uncharacterized p 99.1 5.2E-10 1.8E-14 115.3 12.8 103 67-181 118-222 (272)
204 3hp7_A Hemolysin, putative; st 99.1 1.4E-10 5E-15 120.3 8.4 96 68-177 85-184 (291)
205 3opn_A Putative hemolysin; str 99.1 3.7E-11 1.3E-15 121.1 3.9 96 68-178 37-137 (232)
206 1nv8_A HEMK protein; class I a 99.1 1.7E-10 5.9E-15 119.7 8.9 122 52-178 110-249 (284)
207 3kr9_A SAM-dependent methyltra 99.1 6.6E-10 2.3E-14 111.2 12.8 125 68-204 15-143 (225)
208 3bwc_A Spermidine synthase; SA 99.1 2.7E-10 9.3E-15 119.3 10.5 109 68-180 95-212 (304)
209 3ajd_A Putative methyltransfer 99.1 2.5E-10 8.4E-15 117.7 9.8 121 57-180 75-213 (274)
210 3reo_A (ISO)eugenol O-methyltr 99.1 5.8E-10 2E-14 119.9 12.8 100 67-180 202-302 (368)
211 3p9c_A Caffeic acid O-methyltr 99.1 6.5E-10 2.2E-14 119.3 12.6 100 67-180 200-300 (364)
212 2wa2_A Non-structural protein 99.1 8.4E-11 2.9E-15 121.6 5.3 108 67-180 81-195 (276)
213 2ld4_A Anamorsin; methyltransf 99.1 1.2E-10 4E-15 111.3 6.0 87 67-178 11-101 (176)
214 3r3h_A O-methyltransferase, SA 99.1 6.1E-11 2.1E-15 120.1 4.1 103 68-180 60-172 (242)
215 2hnk_A SAM-dependent O-methylt 99.1 3.4E-10 1.2E-14 113.8 9.6 117 50-179 45-182 (239)
216 3cbg_A O-methyltransferase; cy 99.0 6.4E-10 2.2E-14 111.6 11.3 103 68-180 72-184 (232)
217 2pt6_A Spermidine synthase; tr 99.0 2.2E-09 7.5E-14 113.3 15.8 116 515-642 99-254 (321)
218 3giw_A Protein of unknown func 99.0 6.6E-10 2.3E-14 114.1 11.3 111 68-182 78-204 (277)
219 2oxt_A Nucleoside-2'-O-methylt 99.0 7.6E-11 2.6E-15 121.2 4.3 108 67-180 73-187 (265)
220 1fp1_D Isoliquiritigenin 2'-O- 99.0 5.8E-10 2E-14 119.9 11.2 100 67-180 208-308 (372)
221 1fp2_A Isoflavone O-methyltran 99.0 3.2E-10 1.1E-14 121.0 8.6 99 68-180 188-290 (352)
222 3tm4_A TRNA (guanine N2-)-meth 99.0 1.1E-09 3.9E-14 117.9 13.0 124 52-181 205-332 (373)
223 1sui_A Caffeoyl-COA O-methyltr 99.0 4.3E-10 1.5E-14 114.2 9.1 102 68-179 79-191 (247)
224 2cmg_A Spermidine synthase; tr 99.0 7.6E-10 2.6E-14 113.5 10.9 97 515-625 55-171 (262)
225 1xj5_A Spermidine synthase 1; 99.0 7.3E-10 2.5E-14 117.6 11.0 108 68-178 120-235 (334)
226 1iy9_A Spermidine synthase; ro 99.0 9.8E-10 3.4E-14 113.4 11.6 110 68-180 75-191 (275)
227 2o07_A Spermidine synthase; st 99.0 6.6E-10 2.3E-14 116.4 9.9 109 68-179 95-210 (304)
228 1uir_A Polyamine aminopropyltr 99.0 9.1E-10 3.1E-14 115.9 10.8 111 68-179 77-196 (314)
229 3gjy_A Spermidine synthase; AP 99.0 8.7E-10 3E-14 115.7 10.4 108 70-180 91-202 (317)
230 2b78_A Hypothetical protein SM 99.0 1.1E-09 3.7E-14 118.5 11.5 131 46-181 195-334 (385)
231 1mjf_A Spermidine synthase; sp 99.0 7.6E-10 2.6E-14 114.6 9.9 108 68-179 75-194 (281)
232 3frh_A 16S rRNA methylase; met 99.0 5E-09 1.7E-13 105.1 15.2 102 68-178 105-206 (253)
233 4dmg_A Putative uncharacterize 99.0 1.5E-09 5.3E-14 117.6 12.5 130 46-181 197-329 (393)
234 1zq9_A Probable dimethyladenos 99.0 5.9E-10 2E-14 115.7 8.8 90 51-146 14-105 (285)
235 2i7c_A Spermidine synthase; tr 99.0 1E-09 3.5E-14 113.7 10.2 108 68-179 78-193 (283)
236 2b2c_A Spermidine synthase; be 99.0 9E-10 3.1E-14 115.9 9.9 107 68-178 108-222 (314)
237 2avd_A Catechol-O-methyltransf 99.0 8.4E-10 2.9E-14 109.7 9.2 115 52-179 56-180 (229)
238 1inl_A Spermidine synthase; be 99.0 1.4E-09 4.9E-14 113.4 11.0 111 68-180 90-207 (296)
239 3bwc_A Spermidine synthase; SA 99.0 2.8E-09 9.5E-14 111.6 13.2 99 515-625 78-210 (304)
240 2yxl_A PH0851 protein, 450AA l 99.0 2.5E-09 8.6E-14 118.0 13.3 122 56-180 250-391 (450)
241 4a6d_A Hydroxyindole O-methylt 99.0 4.4E-09 1.5E-13 112.4 14.7 106 67-180 178-285 (353)
242 2as0_A Hypothetical protein PH 99.0 1.1E-09 3.8E-14 118.8 10.1 131 46-181 200-338 (396)
243 3c3y_A Pfomt, O-methyltransfer 99.0 1.1E-09 3.7E-14 110.4 9.2 102 68-179 70-182 (237)
244 2pt6_A Spermidine synthase; tr 99.0 1.6E-09 5.4E-14 114.4 10.8 109 68-180 116-232 (321)
245 3c0k_A UPF0064 protein YCCW; P 99.0 2.5E-09 8.7E-14 116.0 12.4 130 45-180 203-341 (396)
246 3v97_A Ribosomal RNA large sub 99.0 1.4E-09 4.8E-14 126.3 10.9 130 45-180 522-659 (703)
247 2h00_A Methyltransferase 10 do 99.0 1.4E-09 4.7E-14 110.2 9.5 127 52-178 47-192 (254)
248 3k6r_A Putative transferase PH 99.0 2.4E-09 8.2E-14 110.6 11.4 118 46-180 108-227 (278)
249 2p41_A Type II methyltransfera 99.0 5.5E-10 1.9E-14 117.1 6.7 107 67-181 81-194 (305)
250 2cmg_A Spermidine synthase; tr 98.9 1.5E-09 5.1E-14 111.4 9.5 96 68-179 72-172 (262)
251 1sqg_A SUN protein, FMU protei 98.9 2.7E-09 9.4E-14 117.0 12.2 125 53-180 234-376 (429)
252 2yx1_A Hypothetical protein MJ 98.9 3.8E-09 1.3E-13 112.2 12.0 99 68-182 195-295 (336)
253 2qm3_A Predicted methyltransfe 98.9 3.2E-09 1.1E-13 114.3 10.6 103 68-179 172-279 (373)
254 3v97_A Ribosomal RNA large sub 98.9 7.7E-07 2.6E-11 103.3 31.1 126 52-180 177-349 (703)
255 1zg3_A Isoflavanone 4'-O-methy 98.9 1.7E-09 5.8E-14 115.6 8.2 99 68-180 193-295 (358)
256 3lcv_B Sisomicin-gentamicin re 98.9 3.6E-09 1.2E-13 107.1 9.9 147 48-206 117-274 (281)
257 3m6w_A RRNA methylase; rRNA me 98.9 2.1E-09 7.3E-14 118.5 8.3 122 56-180 92-231 (464)
258 2frx_A Hypothetical protein YE 98.9 5.3E-09 1.8E-13 116.1 11.4 113 68-180 117-248 (479)
259 1wxx_A TT1595, hypothetical pr 98.9 4.4E-09 1.5E-13 113.6 9.5 112 68-180 209-327 (382)
260 2okc_A Type I restriction enzy 98.9 3.1E-08 1.1E-12 109.1 16.4 175 47-225 153-359 (445)
261 2h1r_A Dimethyladenosine trans 98.8 1E-08 3.5E-13 107.1 10.9 89 51-145 28-117 (299)
262 3m4x_A NOL1/NOP2/SUN family pr 98.8 5.8E-09 2E-13 114.9 9.1 122 56-180 96-236 (456)
263 1xj5_A Spermidine synthase 1; 98.8 7.9E-09 2.7E-13 109.6 9.4 97 515-624 103-234 (334)
264 3gru_A Dimethyladenosine trans 98.8 1.3E-08 4.4E-13 106.0 10.2 90 51-145 36-125 (295)
265 2ih2_A Modification methylase 98.8 2.5E-08 8.4E-13 108.5 13.0 123 46-180 20-166 (421)
266 2xyq_A Putative 2'-O-methyl tr 98.8 2.5E-08 8.4E-13 103.6 11.9 102 67-183 62-176 (290)
267 1uwv_A 23S rRNA (uracil-5-)-me 98.7 5.5E-08 1.9E-12 106.7 14.0 132 53-200 274-410 (433)
268 2jjq_A Uncharacterized RNA met 98.7 4.8E-08 1.6E-12 106.9 13.3 99 67-178 289-387 (425)
269 1yub_A Ermam, rRNA methyltrans 98.7 1.9E-10 6.6E-15 116.4 -5.5 114 52-178 16-145 (245)
270 3tqs_A Ribosomal RNA small sub 98.7 1.4E-07 4.7E-12 96.2 13.2 86 51-142 15-104 (255)
271 1qam_A ERMC' methyltransferase 98.6 3.2E-07 1.1E-11 92.8 14.6 86 52-143 17-103 (244)
272 3ldg_A Putative uncharacterize 98.6 1.7E-07 5.7E-12 101.2 12.8 122 52-180 181-345 (384)
273 3k0b_A Predicted N6-adenine-sp 98.6 1E-07 3.5E-12 103.3 11.1 122 52-180 188-352 (393)
274 3ldu_A Putative methylase; str 98.6 9.7E-08 3.3E-12 103.2 10.4 122 52-180 182-346 (385)
275 3bt7_A TRNA (uracil-5-)-methyl 98.6 1E-07 3.6E-12 102.3 10.4 113 53-183 202-331 (369)
276 3fut_A Dimethyladenosine trans 98.6 1.4E-07 4.9E-12 96.9 9.8 89 51-146 33-122 (271)
277 2qfm_A Spermine synthase; sper 98.6 1.2E-07 4.2E-12 100.7 9.3 113 68-180 188-316 (364)
278 2b9e_A NOL1/NOP2/SUN domain fa 98.5 5.5E-07 1.9E-11 94.4 13.6 120 57-180 94-236 (309)
279 3ftd_A Dimethyladenosine trans 98.5 4.5E-07 1.5E-11 92.1 11.4 76 51-132 17-92 (249)
280 3evf_A RNA-directed RNA polyme 98.5 6.1E-07 2.1E-11 91.3 11.8 147 66-218 72-223 (277)
281 2dul_A N(2),N(2)-dimethylguano 98.4 3.7E-07 1.3E-11 98.4 8.4 100 68-178 47-164 (378)
282 2ar0_A M.ecoki, type I restric 98.4 2.1E-06 7.2E-11 96.7 14.3 174 49-225 153-364 (541)
283 1m6y_A S-adenosyl-methyltransf 98.4 4.3E-07 1.5E-11 94.8 7.9 88 51-141 12-105 (301)
284 3uzu_A Ribosomal RNA small sub 98.4 1.3E-06 4.5E-11 90.2 11.5 74 52-132 29-106 (279)
285 3khk_A Type I restriction-modi 98.3 7.6E-06 2.6E-10 92.1 16.9 178 43-225 223-448 (544)
286 3axs_A Probable N(2),N(2)-dime 98.3 8.5E-07 2.9E-11 95.8 8.2 100 68-178 52-158 (392)
287 3gcz_A Polyprotein; flavivirus 98.3 6E-07 2E-11 91.5 6.3 148 66-218 88-240 (282)
288 3ll7_A Putative methyltransfer 98.3 6.7E-07 2.3E-11 97.0 6.9 74 68-142 93-171 (410)
289 3lkd_A Type I restriction-modi 98.3 1.5E-05 5.1E-10 89.7 17.7 181 44-224 196-409 (542)
290 2r6z_A UPF0341 protein in RSP 98.3 3.5E-07 1.2E-11 93.4 3.7 79 67-146 82-173 (258)
291 1qyr_A KSGA, high level kasuga 98.2 9.5E-07 3.2E-11 89.9 6.4 86 52-144 8-100 (252)
292 3o4f_A Spermidine synthase; am 98.2 1.4E-05 4.7E-10 82.8 14.7 109 68-179 83-199 (294)
293 4gqb_A Protein arginine N-meth 98.2 2.6E-06 9E-11 96.9 9.9 100 69-175 358-464 (637)
294 3ua3_A Protein arginine N-meth 98.2 1.6E-06 5.4E-11 98.7 7.5 102 69-175 410-531 (745)
295 3cvo_A Methyltransferase-like 98.1 2.1E-05 7.2E-10 77.1 13.3 115 45-178 12-154 (202)
296 3b5i_A S-adenosyl-L-methionine 98.1 1.7E-05 6E-10 84.9 13.4 114 69-182 53-229 (374)
297 2efj_A 3,7-dimethylxanthine me 98.1 2.5E-05 8.5E-10 83.9 13.0 114 69-183 53-230 (384)
298 2oyr_A UPF0341 protein YHIQ; a 98.0 3.5E-06 1.2E-10 85.9 5.8 104 57-172 78-194 (258)
299 3eld_A Methyltransferase; flav 98.0 8.4E-06 2.9E-10 83.6 7.2 147 67-218 80-230 (300)
300 2k4m_A TR8_protein, UPF0146 pr 98.0 5.5E-06 1.9E-10 76.4 5.2 89 68-183 35-126 (153)
301 3s1s_A Restriction endonucleas 97.9 9.3E-05 3.2E-09 85.5 14.0 135 45-180 295-467 (878)
302 3c6k_A Spermine synthase; sper 97.8 3.8E-05 1.3E-09 82.0 8.3 111 68-178 205-331 (381)
303 1m6e_X S-adenosyl-L-methionnin 97.8 4.2E-05 1.4E-09 81.5 8.4 116 68-183 51-214 (359)
304 4fzv_A Putative methyltransfer 97.7 6.7E-05 2.3E-09 80.0 9.5 114 67-180 147-286 (359)
305 3p8z_A Mtase, non-structural p 97.7 0.00028 9.7E-09 69.8 12.4 132 67-205 77-214 (267)
306 3lkz_A Non-structural protein 97.6 0.00019 6.4E-09 73.4 10.4 134 66-204 92-231 (321)
307 4auk_A Ribosomal RNA large sub 97.6 0.00015 5.2E-09 77.1 10.1 99 67-180 210-308 (375)
308 2qy6_A UPF0209 protein YFCK; s 97.6 3.3E-05 1.1E-09 78.7 4.6 104 68-176 60-211 (257)
309 1wg8_A Predicted S-adenosylmet 97.6 0.00014 4.7E-09 74.5 9.1 84 50-140 7-95 (285)
310 3orh_A Guanidinoacetate N-meth 97.6 7.7E-05 2.6E-09 74.6 6.7 80 541-624 60-169 (236)
311 2px2_A Genome polyprotein [con 97.5 0.00017 5.9E-09 72.4 8.5 109 67-181 72-186 (269)
312 2wk1_A NOVP; transferase, O-me 97.5 0.00032 1.1E-08 72.2 9.5 104 68-180 106-246 (282)
313 3ufb_A Type I restriction-modi 97.4 0.0043 1.5E-07 69.5 17.8 176 47-225 199-415 (530)
314 3fpf_A Mtnas, putative unchara 97.3 0.00041 1.4E-08 71.8 8.5 81 540-626 121-223 (298)
315 3dtn_A Putative methyltransfer 97.2 0.0015 5.1E-08 64.3 10.8 81 540-623 43-146 (234)
316 3hm2_A Precorrin-6Y C5,15-meth 97.2 0.0015 5E-08 61.1 10.2 83 541-626 25-128 (178)
317 3c3y_A Pfomt, O-methyltransfer 97.2 0.00086 2.9E-08 66.9 8.4 81 540-625 69-182 (237)
318 3r24_A NSP16, 2'-O-methyl tran 97.1 0.0034 1.2E-07 64.1 12.5 103 67-183 108-222 (344)
319 3e05_A Precorrin-6Y C5,15-meth 97.1 0.0025 8.6E-08 61.4 11.0 82 541-625 40-142 (204)
320 3jwh_A HEN1; methyltransferase 97.1 0.0031 1.1E-07 61.3 11.7 82 541-625 29-141 (217)
321 2zig_A TTHA0409, putative modi 97.1 0.0011 3.8E-08 68.6 8.7 61 52-117 223-283 (297)
322 3duw_A OMT, O-methyltransferas 97.1 0.002 7E-08 62.9 10.2 80 541-625 58-167 (223)
323 3tfw_A Putative O-methyltransf 97.0 0.0016 5.4E-08 65.4 9.2 79 541-624 63-169 (248)
324 3dr5_A Putative O-methyltransf 97.0 0.00079 2.7E-08 66.6 6.7 79 543-625 58-163 (221)
325 1sui_A Caffeoyl-COA O-methyltr 96.9 0.0022 7.5E-08 64.5 8.7 79 540-623 78-188 (247)
326 3jwg_A HEN1, methyltransferase 96.9 0.0026 9E-08 61.9 9.0 81 540-623 28-139 (219)
327 4gek_A TRNA (CMO5U34)-methyltr 96.9 0.004 1.4E-07 63.2 10.6 79 542-623 71-176 (261)
328 3mgg_A Methyltransferase; NYSG 96.8 0.0018 6E-08 65.5 7.1 81 540-623 36-140 (276)
329 4dzr_A Protein-(glutamine-N5) 96.8 0.001 3.6E-08 63.9 5.2 47 540-586 29-75 (215)
330 3ntv_A MW1564 protein; rossman 96.8 0.0029 1E-07 62.6 8.5 80 541-623 71-174 (232)
331 4a6d_A Hydroxyindole O-methylt 96.8 0.0047 1.6E-07 65.4 10.6 80 540-623 178-281 (353)
332 3g07_A 7SK snRNA methylphospha 96.8 0.0025 8.7E-08 65.5 8.2 45 541-585 46-90 (292)
333 2hnk_A SAM-dependent O-methylt 96.7 0.0036 1.2E-07 62.1 8.6 45 541-585 60-105 (239)
334 2gpy_A O-methyltransferase; st 96.7 0.0041 1.4E-07 61.3 8.9 81 541-624 54-159 (233)
335 3hnr_A Probable methyltransfer 96.7 0.0093 3.2E-07 57.8 11.1 79 541-624 45-144 (220)
336 1p91_A Ribosomal RNA large sub 96.7 0.0035 1.2E-07 63.1 8.3 82 541-625 85-178 (269)
337 2p35_A Trans-aconitate 2-methy 96.7 0.0038 1.3E-07 62.1 8.5 83 540-625 32-132 (259)
338 3r3h_A O-methyltransferase, SA 96.7 0.0011 3.9E-08 66.4 4.5 78 541-623 60-168 (242)
339 3kkz_A Uncharacterized protein 96.7 0.0021 7.2E-08 64.7 6.6 82 540-625 45-150 (267)
340 2avd_A Catechol-O-methyltransf 96.6 0.0046 1.6E-07 60.6 8.5 78 541-623 69-177 (229)
341 1yzh_A TRNA (guanine-N(7)-)-me 96.6 0.0066 2.3E-07 59.0 9.6 82 541-625 41-156 (214)
342 3tr6_A O-methyltransferase; ce 96.6 0.0032 1.1E-07 61.6 7.2 79 541-624 64-173 (225)
343 3i53_A O-methyltransferase; CO 96.6 0.0062 2.1E-07 63.6 9.7 80 540-623 168-272 (332)
344 3njr_A Precorrin-6Y methylase; 96.5 0.015 5.2E-07 56.3 11.5 81 541-626 55-155 (204)
345 4hg2_A Methyltransferase type 96.5 0.0021 7.1E-08 65.2 5.4 79 540-623 38-133 (257)
346 3ujc_A Phosphoethanolamine N-m 96.5 0.005 1.7E-07 61.4 8.2 81 540-624 54-158 (266)
347 3hem_A Cyclopropane-fatty-acyl 96.5 0.0062 2.1E-07 62.6 9.1 81 541-625 72-183 (302)
348 3f4k_A Putative methyltransfer 96.5 0.0038 1.3E-07 62.2 6.9 81 540-624 45-149 (257)
349 3ou2_A SAM-dependent methyltra 96.5 0.0083 2.9E-07 57.8 9.1 80 540-625 45-146 (218)
350 2fca_A TRNA (guanine-N(7)-)-me 96.5 0.009 3.1E-07 58.4 9.4 82 541-625 38-153 (213)
351 3cbg_A O-methyltransferase; cy 96.5 0.0058 2E-07 60.5 8.1 81 541-624 72-181 (232)
352 3dh0_A SAM dependent methyltra 96.4 0.0033 1.1E-07 60.9 6.1 82 540-624 36-142 (219)
353 3ofk_A Nodulation protein S; N 96.4 0.0096 3.3E-07 57.6 9.4 81 540-625 50-154 (216)
354 1dus_A MJ0882; hypothetical pr 96.4 0.0085 2.9E-07 56.3 8.8 81 541-626 52-158 (194)
355 3mb5_A SAM-dependent methyltra 96.4 0.016 5.4E-07 57.7 11.1 83 540-625 92-194 (255)
356 3gwz_A MMCR; methyltransferase 96.4 0.0086 2.9E-07 63.7 9.4 80 540-623 201-305 (369)
357 3g5l_A Putative S-adenosylmeth 96.4 0.0085 2.9E-07 59.6 8.8 81 541-625 44-145 (253)
358 2p7i_A Hypothetical protein; p 96.4 0.0079 2.7E-07 59.0 8.3 80 541-625 42-141 (250)
359 1kpg_A CFA synthase;, cyclopro 96.3 0.0087 3E-07 60.8 8.7 81 541-625 64-168 (287)
360 2pxx_A Uncharacterized protein 96.3 0.0083 2.8E-07 57.6 8.1 82 541-626 42-160 (215)
361 1jsx_A Glucose-inhibited divis 96.3 0.0079 2.7E-07 57.8 7.9 81 542-625 66-165 (207)
362 2fk8_A Methoxy mycolic acid sy 96.3 0.0062 2.1E-07 63.0 7.5 81 541-625 90-194 (318)
363 3dlc_A Putative S-adenosyl-L-m 96.3 0.011 3.7E-07 56.8 8.6 80 541-624 43-147 (219)
364 1x19_A CRTF-related protein; m 96.3 0.01 3.4E-07 62.8 9.0 80 540-623 189-293 (359)
365 3gu3_A Methyltransferase; alph 96.3 0.011 3.8E-07 60.2 9.1 81 540-623 21-124 (284)
366 3dxy_A TRNA (guanine-N(7)-)-me 96.3 0.008 2.7E-07 59.2 7.7 82 541-625 34-150 (218)
367 1nkv_A Hypothetical protein YJ 96.2 0.016 5.5E-07 57.5 9.9 79 541-623 36-138 (256)
368 3e23_A Uncharacterized protein 96.2 0.0099 3.4E-07 57.3 8.0 80 541-625 43-141 (211)
369 2ozv_A Hypothetical protein AT 96.2 0.009 3.1E-07 60.3 8.0 47 541-587 36-82 (260)
370 2yxe_A Protein-L-isoaspartate 96.2 0.0099 3.4E-07 57.5 7.8 84 541-627 77-179 (215)
371 2pwy_A TRNA (adenine-N(1)-)-me 96.2 0.027 9.3E-07 55.9 11.2 82 541-625 96-198 (258)
372 2qe6_A Uncharacterized protein 96.2 0.023 7.8E-07 57.9 10.8 82 541-625 77-196 (274)
373 1rjd_A PPM1P, carboxy methyl t 96.2 0.021 7.2E-07 60.1 10.7 116 55-180 87-234 (334)
374 1vl5_A Unknown conserved prote 96.2 0.013 4.4E-07 58.5 8.8 79 540-623 36-138 (260)
375 3g5t_A Trans-aconitate 3-methy 96.1 0.012 4.1E-07 60.2 8.5 81 540-623 35-147 (299)
376 3pfg_A N-methyltransferase; N, 96.1 0.014 4.7E-07 58.4 8.7 81 540-625 49-151 (263)
377 2ex4_A Adrenal gland protein A 96.1 0.0066 2.2E-07 60.1 6.1 79 541-623 79-183 (241)
378 1ve3_A Hypothetical protein PH 96.1 0.0095 3.2E-07 57.9 7.2 80 542-626 39-143 (227)
379 2qm3_A Predicted methyltransfe 96.1 0.02 6.9E-07 61.0 10.3 74 542-619 173-271 (373)
380 3h2b_A SAM-dependent methyltra 96.0 0.015 5.1E-07 55.6 8.3 79 542-625 42-141 (203)
381 3bus_A REBM, methyltransferase 96.0 0.011 3.7E-07 59.4 7.7 81 540-624 60-165 (273)
382 3ggd_A SAM-dependent methyltra 96.0 0.03 1E-06 55.3 10.7 75 541-623 56-161 (245)
383 2yqz_A Hypothetical protein TT 96.0 0.023 7.9E-07 56.4 9.9 80 540-624 38-140 (263)
384 3mcz_A O-methyltransferase; ad 96.0 0.023 8E-07 59.5 10.4 78 542-623 180-285 (352)
385 1xtp_A LMAJ004091AAA; SGPP, st 96.0 0.014 4.9E-07 57.7 8.3 80 540-623 92-195 (254)
386 2avn_A Ubiquinone/menaquinone 96.0 0.026 9E-07 56.4 10.2 81 541-626 54-153 (260)
387 1yb2_A Hypothetical protein TA 96.0 0.019 6.3E-07 58.3 9.1 82 541-625 110-211 (275)
388 1jg1_A PIMT;, protein-L-isoasp 96.0 0.014 4.7E-07 57.6 7.9 81 541-625 91-189 (235)
389 3sm3_A SAM-dependent methyltra 95.9 0.021 7.3E-07 55.4 9.1 80 540-624 29-140 (235)
390 3ccf_A Cyclopropane-fatty-acyl 95.9 0.021 7.3E-07 57.7 9.2 80 541-625 57-154 (279)
391 3e8s_A Putative SAM dependent 95.9 0.037 1.3E-06 53.3 10.6 81 540-625 51-152 (227)
392 1pjz_A Thiopurine S-methyltran 95.9 0.033 1.1E-06 53.8 10.1 45 540-586 21-65 (203)
393 3bxo_A N,N-dimethyltransferase 95.9 0.022 7.6E-07 55.7 9.0 81 540-625 39-141 (239)
394 3l8d_A Methyltransferase; stru 95.9 0.019 6.6E-07 56.3 8.6 81 540-625 52-153 (242)
395 3lcc_A Putative methyl chlorid 95.9 0.013 4.4E-07 57.6 7.2 78 542-624 67-170 (235)
396 2vdv_E TRNA (guanine-N(7)-)-me 95.9 0.012 4E-07 58.7 7.0 45 541-585 49-93 (246)
397 4htf_A S-adenosylmethionine-de 95.9 0.018 6E-07 58.5 8.4 81 541-626 68-174 (285)
398 3grz_A L11 mtase, ribosomal pr 95.9 0.013 4.5E-07 56.2 7.1 81 541-625 60-159 (205)
399 2xvm_A Tellurite resistance pr 95.9 0.012 4E-07 55.8 6.6 78 541-623 32-134 (199)
400 3dli_A Methyltransferase; PSI- 95.9 0.02 6.9E-07 56.5 8.5 81 540-625 40-140 (240)
401 2o57_A Putative sarcosine dime 95.8 0.017 5.9E-07 58.8 8.1 81 540-624 81-186 (297)
402 3mq2_A 16S rRNA methyltransfer 95.8 0.016 5.6E-07 56.1 7.5 80 541-624 27-139 (218)
403 3lbf_A Protein-L-isoaspartate 95.8 0.014 4.7E-07 56.3 6.9 82 540-626 76-175 (210)
404 1l3i_A Precorrin-6Y methyltran 95.8 0.029 9.8E-07 52.5 9.0 81 540-625 32-134 (192)
405 2yvl_A TRMI protein, hypotheti 95.8 0.048 1.7E-06 53.7 11.0 81 541-626 91-191 (248)
406 3ckk_A TRNA (guanine-N(7)-)-me 95.8 0.017 5.8E-07 57.5 7.6 45 540-584 45-89 (235)
407 2vz8_A Fatty acid synthase; tr 95.8 0.0017 5.9E-08 85.0 0.3 105 67-180 1239-1350(2512)
408 3g2m_A PCZA361.24; SAM-depende 95.8 0.015 5.1E-07 59.6 7.4 82 541-627 82-192 (299)
409 1zx0_A Guanidinoacetate N-meth 95.8 0.025 8.5E-07 55.7 8.8 81 541-625 60-170 (236)
410 1vbf_A 231AA long hypothetical 95.7 0.022 7.5E-07 55.7 8.2 80 541-625 70-165 (231)
411 3vc1_A Geranyl diphosphate 2-C 95.7 0.012 4.1E-07 60.8 6.5 80 540-623 116-219 (312)
412 4dcm_A Ribosomal RNA large sub 95.7 0.024 8.1E-07 60.6 8.8 92 542-636 223-347 (375)
413 3c3p_A Methyltransferase; NP_9 95.7 0.012 4E-07 57.0 5.9 78 541-623 56-158 (210)
414 1i1n_A Protein-L-isoaspartate 95.7 0.02 6.8E-07 55.9 7.6 82 541-625 77-182 (226)
415 3thr_A Glycine N-methyltransfe 95.7 0.026 8.8E-07 57.3 8.7 81 541-626 57-176 (293)
416 2b3t_A Protein methyltransfera 95.7 0.015 5E-07 59.1 6.8 44 542-585 110-153 (276)
417 1o54_A SAM-dependent O-methylt 95.7 0.023 7.8E-07 57.6 8.2 82 541-625 112-213 (277)
418 1dl5_A Protein-L-isoaspartate 95.6 0.023 7.8E-07 59.0 8.2 85 541-628 75-178 (317)
419 3ocj_A Putative exported prote 95.6 0.015 5.1E-07 59.9 6.7 83 540-625 117-227 (305)
420 2aot_A HMT, histamine N-methyl 95.6 0.045 1.5E-06 55.9 10.2 80 541-623 52-170 (292)
421 1g60_A Adenine-specific methyl 95.6 0.027 9.1E-07 56.9 8.4 58 51-113 199-256 (260)
422 2y1w_A Histone-arginine methyl 95.6 0.037 1.3E-06 58.3 9.8 80 541-625 50-155 (348)
423 1i9g_A Hypothetical protein RV 95.6 0.035 1.2E-06 56.0 9.3 82 541-625 99-203 (280)
424 2r3s_A Uncharacterized protein 95.6 0.033 1.1E-06 57.8 9.1 80 540-623 164-269 (335)
425 1qzz_A RDMB, aclacinomycin-10- 95.5 0.013 4.5E-07 62.0 6.0 80 540-623 181-285 (374)
426 1i4w_A Mitochondrial replicati 95.5 0.032 1.1E-06 59.1 8.9 76 51-128 38-117 (353)
427 3eey_A Putative rRNA methylase 95.5 0.025 8.4E-07 53.8 7.4 81 542-625 23-139 (197)
428 3cgg_A SAM-dependent methyltra 95.5 0.048 1.6E-06 51.1 9.2 81 540-625 45-147 (195)
429 3tka_A Ribosomal RNA small sub 95.5 0.014 4.9E-07 61.0 5.8 73 50-128 42-116 (347)
430 3g89_A Ribosomal RNA small sub 95.5 0.034 1.2E-06 55.7 8.5 80 541-623 80-182 (249)
431 1g55_A DNA cytosine methyltran 95.5 0.061 2.1E-06 56.7 10.8 70 70-143 3-77 (343)
432 1fp1_D Isoliquiritigenin 2'-O- 95.5 0.031 1.1E-06 59.3 8.6 80 540-623 208-304 (372)
433 3lpm_A Putative methyltransfer 95.4 0.016 5.6E-07 58.1 6.1 44 541-585 49-92 (259)
434 3cc8_A Putative methyltransfer 95.4 0.033 1.1E-06 53.8 8.1 80 541-625 32-130 (230)
435 1xxl_A YCGJ protein; structura 95.4 0.021 7.1E-07 56.4 6.8 79 540-623 20-122 (239)
436 1fp2_A Isoflavone O-methyltran 95.4 0.036 1.2E-06 58.3 9.0 80 540-623 187-286 (352)
437 3dp7_A SAM-dependent methyltra 95.4 0.066 2.3E-06 56.6 11.0 79 541-623 179-285 (363)
438 3evz_A Methyltransferase; NYSG 95.4 0.035 1.2E-06 54.2 8.3 44 541-585 55-99 (230)
439 2ip2_A Probable phenazine-spec 95.4 0.057 1.9E-06 56.1 10.3 77 543-623 169-270 (334)
440 4hc4_A Protein arginine N-meth 95.4 0.035 1.2E-06 59.3 8.8 79 542-625 84-189 (376)
441 3p2e_A 16S rRNA methylase; met 95.4 0.018 6.2E-07 56.9 6.1 80 541-623 24-137 (225)
442 4fsd_A Arsenic methyltransfera 95.4 0.031 1.1E-06 59.7 8.3 81 541-624 83-202 (383)
443 2bm8_A Cephalosporin hydroxyla 95.4 0.015 5E-07 57.9 5.4 81 542-625 82-187 (236)
444 3i9f_A Putative type 11 methyl 95.3 0.022 7.4E-07 52.8 6.2 81 540-625 16-112 (170)
445 3reo_A (ISO)eugenol O-methyltr 95.3 0.033 1.1E-06 59.2 8.3 80 540-623 202-298 (368)
446 3u81_A Catechol O-methyltransf 95.3 0.02 6.8E-07 55.9 6.1 45 541-585 58-103 (221)
447 1r18_A Protein-L-isoaspartate( 95.3 0.019 6.6E-07 56.2 6.0 82 542-626 85-195 (227)
448 3mti_A RRNA methylase; SAM-dep 95.3 0.018 6.3E-07 54.1 5.6 43 541-585 22-64 (185)
449 2gb4_A Thiopurine S-methyltran 95.3 0.031 1.1E-06 56.2 7.6 44 541-586 68-111 (252)
450 1af7_A Chemotaxis receptor met 95.2 0.025 8.5E-07 57.8 6.7 43 541-583 105-155 (274)
451 1y8c_A S-adenosylmethionine-de 95.2 0.028 9.5E-07 55.0 6.7 82 541-627 37-144 (246)
452 1fbn_A MJ fibrillarin homologu 95.2 0.07 2.4E-06 52.3 9.6 80 541-623 74-176 (230)
453 3d2l_A SAM-dependent methyltra 95.1 0.033 1.1E-06 54.5 7.0 80 542-627 34-139 (243)
454 2b25_A Hypothetical protein; s 95.1 0.05 1.7E-06 56.8 8.7 82 541-625 105-219 (336)
455 3p9n_A Possible methyltransfer 95.1 0.049 1.7E-06 51.5 7.9 44 541-585 44-87 (189)
456 1tw3_A COMT, carminomycin 4-O- 95.1 0.038 1.3E-06 58.1 7.8 80 540-623 182-286 (360)
457 3bkw_A MLL3908 protein, S-aden 95.0 0.058 2E-06 52.7 8.5 81 541-625 43-144 (243)
458 3m33_A Uncharacterized protein 95.0 0.045 1.5E-06 53.5 7.6 77 541-622 48-139 (226)
459 1wzn_A SAM-dependent methyltra 95.0 0.099 3.4E-06 51.6 10.2 80 541-625 41-145 (252)
460 2p8j_A S-adenosylmethionine-de 95.0 0.054 1.8E-06 51.7 7.9 82 540-626 22-129 (209)
461 2pjd_A Ribosomal RNA small sub 95.0 0.042 1.4E-06 57.7 7.7 92 542-636 197-316 (343)
462 4e2x_A TCAB9; kijanose, tetron 94.9 0.034 1.2E-06 59.8 7.1 79 541-625 107-208 (416)
463 3p9c_A Caffeic acid O-methyltr 94.9 0.08 2.7E-06 56.1 9.7 77 540-623 200-296 (364)
464 3m70_A Tellurite resistance pr 94.8 0.049 1.7E-06 55.1 7.5 78 541-623 120-221 (286)
465 3ege_A Putative methyltransfer 94.8 0.058 2E-06 54.0 7.9 78 540-623 33-128 (261)
466 3bgv_A MRNA CAP guanine-N7 met 94.8 0.048 1.6E-06 56.1 7.5 84 541-628 34-158 (313)
467 2kw5_A SLR1183 protein; struct 94.8 0.077 2.6E-06 50.5 8.5 77 544-625 32-131 (202)
468 2fyt_A Protein arginine N-meth 94.8 0.056 1.9E-06 56.8 8.0 79 540-623 63-169 (340)
469 1ri5_A MRNA capping enzyme; me 94.7 0.082 2.8E-06 53.4 8.9 83 540-626 63-175 (298)
470 2gs9_A Hypothetical protein TT 94.7 0.048 1.7E-06 52.3 6.8 77 541-625 36-132 (211)
471 3giw_A Protein of unknown func 94.6 0.11 3.8E-06 53.0 9.5 46 541-586 78-126 (277)
472 3htx_A HEN1; HEN1, small RNA m 94.6 0.3 1E-05 56.9 14.0 79 541-622 721-832 (950)
473 3q7e_A Protein arginine N-meth 94.6 0.052 1.8E-06 57.2 7.3 80 541-625 66-173 (349)
474 3fzg_A 16S rRNA methylase; met 94.6 0.035 1.2E-06 53.7 5.3 47 540-586 48-94 (200)
475 1nv8_A HEMK protein; class I a 94.6 0.065 2.2E-06 54.8 7.7 43 542-585 124-166 (284)
476 2vdw_A Vaccinia virus capping 94.5 0.062 2.1E-06 55.5 7.4 82 541-627 48-171 (302)
477 2uyo_A Hypothetical protein ML 94.5 0.26 8.8E-06 51.2 12.1 105 69-180 103-220 (310)
478 3tma_A Methyltransferase; thum 94.4 0.1 3.6E-06 54.8 9.1 45 541-585 203-248 (354)
479 3tqs_A Ribosomal RNA small sub 94.4 0.092 3.2E-06 53.0 8.2 51 542-596 30-80 (255)
480 2esr_A Methyltransferase; stru 94.3 0.055 1.9E-06 50.4 5.9 45 541-586 31-75 (177)
481 3b3j_A Histone-arginine methyl 94.2 0.12 4E-06 57.1 9.3 80 541-625 158-263 (480)
482 3fut_A Dimethyladenosine trans 94.2 0.12 4E-06 52.7 8.5 48 544-596 49-96 (271)
483 1f8f_A Benzyl alcohol dehydrog 94.1 0.19 6.5E-06 53.1 10.5 95 66-180 188-291 (371)
484 2pbf_A Protein-L-isoaspartate 94.1 0.11 3.9E-06 50.4 8.1 84 541-627 80-195 (227)
485 3g7u_A Cytosine-specific methy 94.0 0.2 6.7E-06 53.5 10.1 70 70-143 3-80 (376)
486 3iv6_A Putative Zn-dependent a 93.9 0.16 5.3E-06 51.5 8.8 44 540-585 44-87 (261)
487 3uwp_A Histone-lysine N-methyl 93.9 0.41 1.4E-05 51.6 12.3 43 541-583 173-215 (438)
488 1ws6_A Methyltransferase; stru 93.8 0.068 2.3E-06 49.1 5.6 43 541-585 41-83 (171)
489 3lst_A CALO1 methyltransferase 93.8 0.12 4.1E-06 54.1 8.1 78 540-623 183-284 (348)
490 2yxd_A Probable cobalt-precorr 93.8 0.13 4.5E-06 47.5 7.6 43 541-585 35-77 (183)
491 1zg3_A Isoflavanone 4'-O-methy 93.8 0.09 3.1E-06 55.3 7.1 79 541-623 193-291 (358)
492 3r0q_C Probable protein argini 93.7 0.1 3.5E-06 55.6 7.4 81 540-625 62-169 (376)
493 4df3_A Fibrillarin-like rRNA/T 93.6 0.099 3.4E-06 52.1 6.5 80 541-623 77-180 (233)
494 2dph_A Formaldehyde dismutase; 93.6 0.22 7.5E-06 53.2 9.8 98 67-179 184-300 (398)
495 1g8a_A Fibrillarin-like PRE-rR 93.6 0.19 6.3E-06 48.9 8.4 81 541-624 73-177 (227)
496 1xdz_A Methyltransferase GIDB; 93.5 0.075 2.6E-06 52.5 5.6 80 541-623 70-172 (240)
497 3ftd_A Dimethyladenosine trans 93.5 0.12 4.2E-06 51.7 7.3 51 541-596 31-81 (249)
498 4ej6_A Putative zinc-binding d 93.5 0.3 1E-05 51.6 10.7 94 67-180 181-286 (370)
499 3gru_A Dimethyladenosine trans 93.4 0.13 4.3E-06 53.2 7.2 43 542-586 51-93 (295)
500 1nt2_A Fibrillarin-like PRE-rR 93.4 0.23 8E-06 48.1 8.8 81 541-624 57-160 (210)
No 1
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.86 E-value=7e-21 Score=187.45 Aligned_cols=190 Identities=32% Similarity=0.607 Sum_probs=152.9
Q ss_pred CCCCHhhHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHH
Q 006149 24 DFTSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVV 103 (659)
Q Consensus 24 ~f~~~eyWd~~y~~~~~~~~fewy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~ 103 (659)
+|.+.+||+++|........++|+..+..+...+.+++. ++.+|||+|||+|.++..+++.+..+|+++|+|+.+
T Consensus 3 ~~~~~~~W~~~y~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~ 77 (215)
T 2pxx_A 3 GYREVEYWDQRYQGAADSAPYDWFGDFSSFRALLEPELR-----PEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVV 77 (215)
T ss_dssp GGGCHHHHHHHTTTTTTSCCCCTTCCHHHHHHHHGGGCC-----TTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHH
T ss_pred cccchhHHHHHhccCCCCCCcccccCHHHHHHHHHHhcC-----CCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHH
Confidence 577899999999877434568999999888877777763 578999999999999999999887689999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEecccccccCCcc--------cchHHHHHHHHHHHhccccCeEEE
Q 006149 104 ISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPE--------LGHKLGNQYLSEVKRLLKSGGKFV 175 (659)
Q Consensus 104 i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~l~~~~--------~~~~~~~~~l~ei~rvLkpGG~lv 175 (659)
++.++++.. ..+++.++++|+.++++++++||+|++.++++++.... ........+++++.++|+|||+++
T Consensus 78 ~~~a~~~~~-~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li 156 (215)
T 2pxx_A 78 VAAMQACYA-HVPQLRWETMDVRKLDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFI 156 (215)
T ss_dssp HHHHHHHTT-TCTTCEEEECCTTSCCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred HHHHHHhcc-cCCCcEEEEcchhcCCCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEE
Confidence 998877664 34689999999999988889999999999998775221 012236799999999999999999
Q ss_pred EEEcCCchhhcchhhhhccCceEEEeeeCCCCCCCCCCccEEEEEEecCC
Q 006149 176 CLTLAESHVLGLLFPKFRFGWKMSVHAIPQKSSSEPSLQTFMVVADKENS 225 (659)
Q Consensus 176 i~~~~~~~~~~~l~~~~~~~w~~~~~~i~~~~~~~~~l~~f~~v~~k~~~ 225 (659)
+.++..++....++......|......+. ...++|++++++.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 200 (215)
T 2pxx_A 157 SMTSAAPHFRTRHYAQAYYGWSLRHATYG------SGFHFHLYLMHKGGK 200 (215)
T ss_dssp EEESCCHHHHHHHHCCGGGCEEEEEEEES------GGGCEEEEEEEETCC
T ss_pred EEeCCCcHHHHHHHhccccCcEEEEEEec------CcceEEEEEEEeCCC
Confidence 99999888776666555557887766652 235668888877553
No 2
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.79 E-value=7.9e-19 Score=179.64 Aligned_cols=143 Identities=18% Similarity=0.325 Sum_probs=113.0
Q ss_pred CCHhhHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHH
Q 006149 26 TSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVIS 105 (659)
Q Consensus 26 ~~~eyWd~~y~~~~~~~~fewy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~ 105 (659)
.+.+||+.+|... ...+.+....+.+...+..++.. .++.+|||+|||+|..+..|++.|+ +|+|||+|+.+|+
T Consensus 31 ~~~~~Wd~~y~~~--~~~~~~~~~~~~l~~~~~~~~~~---~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~ 104 (252)
T 2gb4_A 31 LTLEDWKEKWVTR--HISFHQEQGHQLLKKHLDTFLKG---QSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIR 104 (252)
T ss_dssp CCHHHHHHHHHHT--CCTTCCTTCCHHHHHHHHHHHTT---CCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHH
T ss_pred CCHHHHHHHHhcC--CCCcccCCCCHHHHHHHHHhccC---CCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHH
Confidence 4688999999876 23333333333444445444321 3578999999999999999999998 9999999999999
Q ss_pred HHHHHhhc------------------CCCCcEEEEeecCCCCCCC-CcccEEEecccccccCCcccchHHHHHHHHHHHh
Q 006149 106 DMLRRNVR------------------DRSDMRWRVMDMTSMQFMD-ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKR 166 (659)
Q Consensus 106 ~~~~~~~~------------------~~~~i~~~~~D~~~l~~~~-~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~r 166 (659)
.+++++.. ...+++++++|+.++++++ ++||+|++.++++++...+ ...+++++.+
T Consensus 105 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~-----~~~~l~~~~~ 179 (252)
T 2gb4_A 105 EFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGD-----HDRYADIILS 179 (252)
T ss_dssp HHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGG-----HHHHHHHHHH
T ss_pred HHHHhcccccccccccccccccccccCCCceEEEECccccCCcccCCCEEEEEEhhhhhhCCHHH-----HHHHHHHHHH
Confidence 98776531 2468999999999998764 8999999999999986543 6689999999
Q ss_pred ccccCeEEEEEEc
Q 006149 167 LLKSGGKFVCLTL 179 (659)
Q Consensus 167 vLkpGG~lvi~~~ 179 (659)
+|||||+++++++
T Consensus 180 ~LkpGG~l~l~~~ 192 (252)
T 2gb4_A 180 LLRKEFQYLVAVL 192 (252)
T ss_dssp TEEEEEEEEEEEE
T ss_pred HcCCCeEEEEEEE
Confidence 9999999987664
No 3
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.76 E-value=5.1e-18 Score=175.95 Aligned_cols=116 Identities=21% Similarity=0.279 Sum_probs=95.5
Q ss_pred chHHHHHHHHHHhhhhhhhhhccccCCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC-----CCC
Q 006149 515 ASSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG-----FTQ 589 (659)
Q Consensus 515 ~~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg-----l~~ 589 (659)
++.||++|++. +|+. +++|++|||||||+|++++.+.++.|..+|++|||||+|+++|++||+ .-+
T Consensus 66 e~~YhE~l~h~-~l~~--------~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~ 136 (294)
T 3o4f_A 66 EFIYHEMMTHV-PLLA--------HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYD 136 (294)
T ss_dssp HHHHHHHHHHH-HHHH--------SSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGG
T ss_pred HHHHHHHHHHH-HHhh--------CCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccC
Confidence 47899999874 4443 388999999999999999999999988899999999999999999993 336
Q ss_pred CCCeeEE-----------------------------ecccchhHHHHHHHhhccCCCCcEEEecC------chHHHHHHH
Q 006149 590 DKSLKVF-----------------------------NHLFCLQLEEDVNLVLFGLSSESCIKDNS------FPEAAVQLG 634 (659)
Q Consensus 590 d~rl~vf-----------------------------~~l~~~~f~~~~~~~Lf~~~~~g~~~~n~------~~~~~~~l~ 634 (659)
|+|++++ .+||+.+||+.|+++| +|+|+++.|+ .......++
T Consensus 137 dpRv~v~~~Dg~~~l~~~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L---~p~Gv~v~q~~sp~~~~~~~~~~~~ 213 (294)
T 3o4f_A 137 DPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCL---NPGGIFVAQNGVCFLQQEEAIDSHR 213 (294)
T ss_dssp CTTEEEEESCTTTTTSCSSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTE---EEEEEEEEEEEESSSCCHHHHHHHH
T ss_pred CCcEEEEechHHHHHhhccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHh---CCCCEEEEecCCcccChHHHHHHHH
Confidence 8888443 4699999999999999 9999999986 233444556
Q ss_pred hhcc-CCcc
Q 006149 635 KLVK-FQHL 642 (659)
Q Consensus 635 ~~~~-f~~~ 642 (659)
++.+ |+++
T Consensus 214 ~l~~~F~~v 222 (294)
T 3o4f_A 214 KLSHYFSDV 222 (294)
T ss_dssp HHHHHCSEE
T ss_pred HHHhhCCce
Confidence 6655 8764
No 4
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.72 E-value=1.5e-17 Score=170.49 Aligned_cols=201 Identities=18% Similarity=0.178 Sum_probs=136.4
Q ss_pred hhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCC
Q 006149 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS 127 (659)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~ 127 (659)
.......+...+.. ..++.+|||+|||+|.++..+++.+..+|+|+|+|+.+++.++++....+ ++++++++|+.+
T Consensus 30 ~~~~~~~~l~~l~~--~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 107 (267)
T 3kkz_A 30 SPEVTLKALSFIDN--LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDD 107 (267)
T ss_dssp CHHHHHHHHTTCCC--CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred CHHHHHHHHHhccc--CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhh
Confidence 33444445555541 25688999999999999999999866699999999999999988765554 569999999999
Q ss_pred CCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCchhhcchhhhhccCceEEEeeeCCCC
Q 006149 128 MQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKMSVHAIPQKS 207 (659)
Q Consensus 128 l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~~~~~l~~~~~~~w~~~~~~i~~~~ 207 (659)
+++++++||+|++.++++++ +. ..+++++.++|||||++++.+..-.. ..........|...++.+....
T Consensus 108 ~~~~~~~fD~i~~~~~~~~~-~~-------~~~l~~~~~~LkpgG~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 177 (267)
T 3kkz_A 108 LPFRNEELDLIWSEGAIYNI-GF-------ERGLNEWRKYLKKGGYLAVSECSWFT--DERPAEINDFWMDAYPEIDTIP 177 (267)
T ss_dssp CCCCTTCEEEEEESSCGGGT-CH-------HHHHHHHGGGEEEEEEEEEEEEEESS--SCCCHHHHHHHHHHCTTCEEHH
T ss_pred CCCCCCCEEEEEEcCCceec-CH-------HHHHHHHHHHcCCCCEEEEEEeeecC--CCChHHHHHHHHHhCCCCCCHH
Confidence 99888999999999999998 43 48999999999999999998864110 0011111222311111111111
Q ss_pred CCCCCCcc--EEEEEEecCCcccccccccccccc------------ccCCcchHHHHHHHHHHHHHHHHHhcCC
Q 006149 208 SSEPSLQT--FMVVADKENSSVVLQVTSSFDHSS------------LDCNKNQAFGIHEALESENQTRREYSHG 267 (659)
Q Consensus 208 ~~~~~l~~--f~~v~~k~~~~~~l~~~~~~~~y~------------~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 267 (659)
.-...+.. |..+. ....+...|.+.|. ......+..++++..+.|+++++.|...
T Consensus 178 ~~~~~l~~aGf~~v~-----~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 246 (267)
T 3kkz_A 178 NQVAKIHKAGYLPVA-----TFILPENCWTDHYFTPKVAAQKIFLTKYAGNKIAEEFSMLQSIEEELYHKYKEY 246 (267)
T ss_dssp HHHHHHHHTTEEEEE-----EEECCGGGTTTTTHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHCCCEEEE-----EEECCHhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhccc
Confidence 00011111 55443 22345556655551 1234567788899999999999988753
No 5
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.70 E-value=1.3e-17 Score=164.68 Aligned_cols=107 Identities=18% Similarity=0.310 Sum_probs=92.1
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhc-------------CCCCcEEEEeecCCCCCCC-
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR-------------DRSDMRWRVMDMTSMQFMD- 132 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~-------------~~~~i~~~~~D~~~l~~~~- 132 (659)
.++.+|||+|||+|..+..|++.|+ +|+|||+|+.||+.++++... ...+++++++|+.++++++
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~ 99 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI 99 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccC
Confidence 4678999999999999999999987 999999999999999877642 2468999999999998765
Q ss_pred CcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 133 ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 133 ~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
++||+|++.++++++...+ ...++++++++|||||++++++.
T Consensus 100 ~~fD~v~~~~~l~~l~~~~-----~~~~l~~~~r~LkpgG~~~l~~~ 141 (203)
T 1pjz_A 100 GHCAAFYDRAAMIALPADM-----RERYVQHLEALMPQACSGLLITL 141 (203)
T ss_dssp HSEEEEEEESCGGGSCHHH-----HHHHHHHHHHHSCSEEEEEEEEE
T ss_pred CCEEEEEECcchhhCCHHH-----HHHHHHHHHHHcCCCcEEEEEEE
Confidence 7999999999999885433 56899999999999999655554
No 6
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.70 E-value=6.3e-17 Score=164.25 Aligned_cols=200 Identities=17% Similarity=0.195 Sum_probs=134.4
Q ss_pred hhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCC
Q 006149 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS 127 (659)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~ 127 (659)
.......+...+.. ..++.+|||+|||+|.++..+++.+..+|+|+|+|+.+++.++++....+ .+++++++|+.+
T Consensus 30 ~~~~~~~~l~~l~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 107 (257)
T 3f4k_A 30 SPEATRKAVSFINE--LTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDN 107 (257)
T ss_dssp CHHHHHHHHTTSCC--CCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred CHHHHHHHHHHHhc--CCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhh
Confidence 33444445555532 24678999999999999999999865599999999999999988776544 359999999999
Q ss_pred CCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCchhhcchhhhhccCceEEEeeeCCCC
Q 006149 128 MQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKMSVHAIPQKS 207 (659)
Q Consensus 128 l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~~~~~l~~~~~~~w~~~~~~i~~~~ 207 (659)
+++++++||+|++.++++++ + ...+++++.++|||||++++.+..- ............|...++.+....
T Consensus 108 ~~~~~~~fD~v~~~~~l~~~-~-------~~~~l~~~~~~L~pgG~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 177 (257)
T 3f4k_A 108 LPFQNEELDLIWSEGAIYNI-G-------FERGMNEWSKYLKKGGFIAVSEASW--FTSERPAEIEDFWMDAYPEISVIP 177 (257)
T ss_dssp CSSCTTCEEEEEEESCSCCC-C-------HHHHHHHHHTTEEEEEEEEEEEEEE--SSSCCCHHHHHHHHHHCTTCCBHH
T ss_pred CCCCCCCEEEEEecChHhhc-C-------HHHHHHHHHHHcCCCcEEEEEEeec--cCCCChHHHHHHHHHhCCCCCCHH
Confidence 99989999999999999998 3 3489999999999999999988531 001111111122322222121111
Q ss_pred CCCCCCcc--EEEEEEecCCccccccccccccc------------cccCCcchHHHHHHHHHHHHHHHHHhcC
Q 006149 208 SSEPSLQT--FMVVADKENSSVVLQVTSSFDHS------------SLDCNKNQAFGIHEALESENQTRREYSH 266 (659)
Q Consensus 208 ~~~~~l~~--f~~v~~k~~~~~~l~~~~~~~~y------------~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 266 (659)
.-...+.. |..+. ....+...|.++| ..........++++.++.|++.++.|..
T Consensus 178 ~~~~~l~~aGf~~v~-----~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (257)
T 3f4k_A 178 TCIDKMERAGYTPTA-----HFILPENCWTEHYFAPQDEVRETFMKEHAGNKTAMDFMKGQQYERSLYSKYKD 245 (257)
T ss_dssp HHHHHHHHTTEEEEE-----EEECCGGGTCCCCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCeEEE-----EEECChhhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 10111111 55443 2234555665544 1223445667788889999999888863
No 7
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.70 E-value=1e-16 Score=168.48 Aligned_cols=125 Identities=18% Similarity=0.253 Sum_probs=101.1
Q ss_pred cCCccchHHHHHHHHHHhhhhhhhhhccccCCCC--eEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCC
Q 006149 510 YHGYLASSYHMGIISGFTLISSYLESVASVGKSV--KAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF 587 (659)
Q Consensus 510 d~~~L~~~Y~~~m~~~l~l~~~~~~~~~~~~~~~--~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl 587 (659)
||.+++++||++|++.+.++.. .+++++ +||+||+|+|+++++|.+++|+++|++|||||.|+++||+||++
T Consensus 62 dP~~le~~Y~e~m~~~~~~l~~------~~p~p~~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~ 135 (317)
T 3gjy_A 62 QPQALEFEYMRWIATGARAFID------AHQDASKLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDI 135 (317)
T ss_dssp CTTCCCSHHHHHHHHHHHHHHH------HHSCGGGCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCC
T ss_pred CCcchhhHHHHHHHHHHHhhcc------cCCCCCCCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccc
Confidence 6788999999999997765210 013444 99999999999999999999999999999999999999999998
Q ss_pred CCCCCeeEE------------------------------ecccchhHHHHHHHhhccCCCCcEEEecCch-----HHHHH
Q 006149 588 TQDKSLKVF------------------------------NHLFCLQLEEDVNLVLFGLSSESCIKDNSFP-----EAAVQ 632 (659)
Q Consensus 588 ~~d~rl~vf------------------------------~~l~~~~f~~~~~~~Lf~~~~~g~~~~n~~~-----~~~~~ 632 (659)
..++|++++ .+|++.+|++.|+++| +++|+++.|+.+ .....
T Consensus 136 ~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~L---kpgGvlv~~~~~~~~~~~~~~~ 212 (317)
T 3gjy_A 136 PRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGL---APGGLYVANCGDHSDLRGAKSE 212 (317)
T ss_dssp CCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHE---EEEEEEEEEEEECTTCHHHHHH
T ss_pred cCCCceEEEECcHHHHHhhccCCCCCEEEECCCCccccchhhhHHHHHHHHHHhc---CCCcEEEEEecCCcchHHHHHH
Confidence 877777332 3577899999999999 999999998842 23345
Q ss_pred HHhhcc-CCccc
Q 006149 633 LGKLVK-FQHLE 643 (659)
Q Consensus 633 l~~~~~-f~~~~ 643 (659)
++++.+ |++..
T Consensus 213 ~~tL~~vF~~v~ 224 (317)
T 3gjy_A 213 LAGMMEVFEHVA 224 (317)
T ss_dssp HHHHHHHCSEEE
T ss_pred HHHHHHHCCceE
Confidence 666666 87653
No 8
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.66 E-value=1.7e-15 Score=147.05 Aligned_cols=132 Identities=20% Similarity=0.348 Sum_probs=107.1
Q ss_pred CCCHhhHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHH
Q 006149 25 FTSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVI 104 (659)
Q Consensus 25 f~~~eyWd~~y~~~~~~~~fewy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i 104 (659)
+...+||+..|.... . . ..+.+++.. .++.+|||+|||+|.++..+++.+. +|+++|+|+.++
T Consensus 5 ~~~~~~~~~~~~~~~---~------~----~~l~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~ 67 (199)
T 2xvm_A 5 IRDENYFTDKYELTR---T------H----SEVLEAVKV---VKPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSI 67 (199)
T ss_dssp CCCTTHHHHHHTCCC---C------C----HHHHHHTTT---SCSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred EechHHHhhhhcccc---c------c----HHHHHHhhc---cCCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHH
Confidence 456789999886541 1 1 124455543 3567999999999999999999876 999999999999
Q ss_pred HHHHHHhhcCC-CCcEEEEeecCCCCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 105 SDMLRRNVRDR-SDMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 105 ~~~~~~~~~~~-~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
+.++++....+ +++.++++|+.++++ +++||+|++.++++++...+ ...+++++.++|+|||++++++.
T Consensus 68 ~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~~~~~~-----~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 68 ANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLMFLEAKT-----IPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp HHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGGGSCGGG-----HHHHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchhhhCCHHH-----HHHHHHHHHHhcCCCeEEEEEEe
Confidence 99887765443 479999999999887 78999999999999986433 56999999999999999888764
No 9
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.63 E-value=1.2e-15 Score=156.90 Aligned_cols=107 Identities=17% Similarity=0.135 Sum_probs=92.1
Q ss_pred CCCCeEEEECCCcchHHHHHHHcC---CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCcccEEEec
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAG---FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDK 141 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g---~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDvVi~~ 141 (659)
+++.+|||+|||+|..+..|++.. ..+|+|||+|+.||+.++++....+ .+++++++|+.+++++ .||+|++.
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~~~ 146 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVVLN 146 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--ccccceee
Confidence 478999999999999999998762 2389999999999999988875543 5799999999998864 69999999
Q ss_pred ccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 142 GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 142 g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
.+++++.+.+ ...+|++++++|||||+|++.+..
T Consensus 147 ~~l~~~~~~~-----~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 147 FTLQFLEPSE-----RQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp SCGGGSCHHH-----HHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred eeeeecCchh-----HhHHHHHHHHHcCCCcEEEEEecc
Confidence 9999986544 568999999999999999998764
No 10
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.63 E-value=1.2e-15 Score=151.92 Aligned_cols=139 Identities=21% Similarity=0.373 Sum_probs=101.6
Q ss_pred CHhhHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHH
Q 006149 27 SKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISD 106 (659)
Q Consensus 27 ~~eyWd~~y~~~~~~~~fewy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~ 106 (659)
+.+||+.++.... .....++. .+..++. ++.+|||+|||+|.++..++..+. +|+++|+|+.+++.
T Consensus 2 ~~~yw~~~~~~~~-~~~~~~~~-------~~~~~~~-----~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~ 67 (235)
T 3sm3_A 2 PESYWEKVSGKNI-PSSLDLYP-------IIHNYLQ-----EDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRL 67 (235)
T ss_dssp -----------------CCCCT-------THHHHCC-----TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHH
T ss_pred chhHHHHHhhccC-CCHHHHHH-------HHHHhCC-----CCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHH
Confidence 3579999887541 22222322 2555553 578999999999999999999976 99999999999998
Q ss_pred HHHHhhcCCC------CcEEEEeecCCCCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 107 MLRRNVRDRS------DMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 107 ~~~~~~~~~~------~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
++++....+. ++.+.++|+.++++++++||+|++..+++++.+++ ....+++++.++|+|||++++.++.
T Consensus 68 a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~----~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (235)
T 3sm3_A 68 AETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQAFLTSVPDPK----ERSRIIKEVFRVLKPGAYLYLVEFG 143 (235)
T ss_dssp HHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEESCGGGCCCHH----HHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred HHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEcchhhcCCCHH----HHHHHHHHHHHHcCCCeEEEEEECC
Confidence 8777654332 58999999999998889999999999999987643 2558999999999999999999987
Q ss_pred Cch
Q 006149 181 ESH 183 (659)
Q Consensus 181 ~~~ 183 (659)
..+
T Consensus 144 ~~~ 146 (235)
T 3sm3_A 144 QNW 146 (235)
T ss_dssp CCT
T ss_pred cch
Confidence 544
No 11
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.63 E-value=1.2e-15 Score=150.68 Aligned_cols=142 Identities=18% Similarity=0.232 Sum_probs=111.1
Q ss_pred CHhhHHHHHhhcCCCCccccccch---hHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHH
Q 006149 27 SKENWDKFFTIRGIGDSFEWYAEW---PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVV 103 (659)
Q Consensus 27 ~~eyWd~~y~~~~~~~~fewy~~~---~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~ 103 (659)
+.++|++.|... +++.+...+ ..+...+...+.. .++.+|||+|||+|.++..+++.+. +|+++|+|+.+
T Consensus 13 ~~~~~~~~~~~~---~~w~~~~~~~~~~~~~~~l~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~ 85 (216)
T 3ofk_A 13 TYQSLERELAND---DPWRLDDNPFERERHTQLLRLSLSS---GAVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRA 85 (216)
T ss_dssp HHHHHHHHHTSS---SGGGTTTCHHHHHHHHHHHHHHTTT---SSEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHH
T ss_pred hHHHHHHHhcCC---CCcccccCHhHHHHHHHHHHHHccc---CCCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHH
Confidence 467999998764 222222221 1233344445543 5678999999999999999998875 99999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 104 ISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 104 i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
++.++++... .++++++++|+.+++ ++++||+|++.++++++.+++ ....+++++.++|||||++++.+...
T Consensus 86 ~~~a~~~~~~-~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~----~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 86 IGRACQRTKR-WSHISWAATDILQFS-TAELFDLIVVAEVLYYLEDMT----QMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp HHHHHHHTTT-CSSEEEEECCTTTCC-CSCCEEEEEEESCGGGSSSHH----HHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred HHHHHHhccc-CCCeEEEEcchhhCC-CCCCccEEEEccHHHhCCCHH----HHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 9988776643 458999999999988 678999999999999987643 25688999999999999999987653
No 12
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.62 E-value=2e-15 Score=151.39 Aligned_cols=139 Identities=19% Similarity=0.299 Sum_probs=107.2
Q ss_pred CHhhHHHHHhhcCCCCccccc--cchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHH
Q 006149 27 SKENWDKFFTIRGIGDSFEWY--AEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVI 104 (659)
Q Consensus 27 ~~eyWd~~y~~~~~~~~fewy--~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i 104 (659)
+.+||+..|... .. .|. ...+. +..++.... .++.+|||+|||+|.++..++..+. +|+|+|+|+.++
T Consensus 32 ~~~~w~~~~~~~--~~--~~~~~~~~~~----l~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~ 101 (235)
T 3lcc_A 32 EEGGWEKCWEEE--IT--PWDQGRATPL----IVHLVDTSS-LPLGRALVPGCGGGHDVVAMASPER-FVVGLDISESAL 101 (235)
T ss_dssp HHHHHHHHHHTT--CC--TTCCSSCCHH----HHHHHHTTC-SCCEEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHH
T ss_pred CHHHHHHHHhcC--CC--CcccCCCCHH----HHHHHHhcC-CCCCCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHH
Confidence 467999999875 22 243 22222 333332211 2346999999999999999988776 899999999999
Q ss_pred HHHHHHhhcC--CCCcEEEEeecCCCCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 105 SDMLRRNVRD--RSDMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 105 ~~~~~~~~~~--~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
+.++++.... ..+++++++|+.+++ ++++||+|++.++++++.... ...+++++.++|+|||++++..+..
T Consensus 102 ~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 102 AKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFCAIEPEM-----RPAWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp HHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTTTSCGGG-----HHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred HHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhhcCCHHH-----HHHHHHHHHHHCCCCcEEEEEEecc
Confidence 9998877542 256999999999987 456999999999999986433 6699999999999999999988753
No 13
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=99.62 E-value=3.4e-15 Score=159.24 Aligned_cols=113 Identities=15% Similarity=0.170 Sum_probs=85.6
Q ss_pred hHHHHHHHHHHhhhhhhhhhccccCCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCC--------
Q 006149 516 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-------- 587 (659)
Q Consensus 516 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl-------- 587 (659)
+.||++|++.+++ . ++|++|||||+|+|++++.+.++.+ .+|++|||||+|+++|++||+.
T Consensus 190 ~~Y~e~l~h~~l~-~---------~~pkrVLIIGgGdG~~~revlkh~~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~ 258 (381)
T 3c6k_A 190 LAYTRAIMGSGKE-D---------YTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDN 258 (381)
T ss_dssp HHHHHHHTTTTCC-C---------CTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSS
T ss_pred HHHHHHHHHHHhh-c---------CCCCeEEEECCCcHHHHHHHHhcCC-ceeEEEccCHHHHHHHHhhchhhhhhhhcc
Confidence 4699999875433 2 3478999999999999999999866 6999999999999999999964
Q ss_pred CCCCCeeEE--------------------------------------ecccchhHHHHHHHhhccCCCCcEEEecC----
Q 006149 588 TQDKSLKVF--------------------------------------NHLFCLQLEEDVNLVLFGLSSESCIKDNS---- 625 (659)
Q Consensus 588 ~~d~rl~vf--------------------------------------~~l~~~~f~~~~~~~Lf~~~~~g~~~~n~---- 625 (659)
+.++|++++ ..||+.+||+.|+++| +++|+++.|+
T Consensus 259 pr~~rv~vii~Da~~fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L---~p~GVlv~Q~~s~~ 335 (381)
T 3c6k_A 259 LKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVL---KQDGKYFTQGNCVN 335 (381)
T ss_dssp SEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTE---EEEEEEEEEEEETT
T ss_pred ccccceeeehHHHHHHHHhhhhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhc---CCCCEEEEecCCCc
Confidence 223455221 1478999999999999 9999999865
Q ss_pred chHHHHHHH-hhcc-CCcc
Q 006149 626 FPEAAVQLG-KLVK-FQHL 642 (659)
Q Consensus 626 ~~~~~~~l~-~~~~-f~~~ 642 (659)
+.+....+. .+.+ |+..
T Consensus 336 ~~~~~~~i~~tl~~vF~~v 354 (381)
T 3c6k_A 336 LTEALSLYEEQLGRLYCPV 354 (381)
T ss_dssp CHHHHHHHHHHHTTSSSCE
T ss_pred chhHHHHHHHHHHHhCCcc
Confidence 334444343 3444 7654
No 14
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.62 E-value=1.7e-15 Score=155.21 Aligned_cols=112 Identities=17% Similarity=0.223 Sum_probs=94.8
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCC
Q 006149 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFM 131 (659)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~ 131 (659)
++...|.++.. ...+|||||||+|.++..|++.+. +|+|+|+|+.|++.+ ...+++.++++|+.+++++
T Consensus 28 ~l~~~l~~~~~-----~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a-----~~~~~v~~~~~~~e~~~~~ 96 (257)
T 4hg2_A 28 ALFRWLGEVAP-----ARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQA-----LRHPRVTYAVAPAEDTGLP 96 (257)
T ss_dssp HHHHHHHHHSS-----CSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTC-----CCCTTEEEEECCTTCCCCC
T ss_pred HHHHHHHHhcC-----CCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhh-----hhcCCceeehhhhhhhccc
Confidence 44555555553 357999999999999999999875 999999999888754 2457899999999999999
Q ss_pred CCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCc
Q 006149 132 DETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (659)
Q Consensus 132 ~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~ 182 (659)
+++||+|++..++|++ +. .++++++.|+|||||+|+++.+...
T Consensus 97 ~~sfD~v~~~~~~h~~-~~-------~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 97 PASVDVAIAAQAMHWF-DL-------DRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp SSCEEEEEECSCCTTC-CH-------HHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred CCcccEEEEeeehhHh-hH-------HHHHHHHHHHcCCCCEEEEEECCCC
Confidence 9999999999999876 33 3899999999999999999987644
No 15
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.62 E-value=2.4e-15 Score=156.27 Aligned_cols=107 Identities=15% Similarity=0.175 Sum_probs=95.2
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCcccEEEeccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGG 143 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDvVi~~g~ 143 (659)
.++.+|||+|||+|.++..+++. +. +|+|+|+|+.+++.++++....+ ++++++++|+.++++++++||+|++.++
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 159 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDA 159 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecch
Confidence 56789999999999999999987 65 99999999999998887765433 5799999999999999999999999999
Q ss_pred ccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 144 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 144 l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
++++.+. ..+++++.++|||||++++.+...
T Consensus 160 l~~~~~~-------~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 160 FLHSPDK-------LKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp GGGCSCH-------HHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred hhhcCCH-------HHHHHHHHHHcCCCeEEEEEEecc
Confidence 9998764 499999999999999999998653
No 16
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.61 E-value=9e-16 Score=154.74 Aligned_cols=108 Identities=16% Similarity=0.172 Sum_probs=94.8
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcC-CCCcEEEEeecCCCCCCCCcccEEEecccccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRD-RSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~-~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~ 146 (659)
++.+|||+|||+|.++..++..+..+|+++|+|+.+++.++++.... ..++.++++|+.++++++++||+|++..++++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 158 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGH 158 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhh
Confidence 57899999999999999998887669999999999999988776544 35689999999999888889999999999999
Q ss_pred cCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 147 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 147 l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+.++. ...+++++.++|+|||++++.+..
T Consensus 159 ~~~~~-----~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 159 LTDQH-----LAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp SCHHH-----HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCHHH-----HHHHHHHHHHhcCCCeEEEEEEcc
Confidence 86543 568999999999999999998764
No 17
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.60 E-value=5.1e-15 Score=145.59 Aligned_cols=135 Identities=21% Similarity=0.248 Sum_probs=108.4
Q ss_pred HhhHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHH
Q 006149 28 KENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDM 107 (659)
Q Consensus 28 ~eyWd~~y~~~~~~~~fewy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~ 107 (659)
.++|+..+... +...++.+...+.+.+.. .++ +|||+|||+|.++..+++....+|+++|+|+.+++.+
T Consensus 14 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~---~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a 82 (219)
T 3dlc_A 14 AKNMDEISKTL-------FAPIYPIIAENIINRFGI---TAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIA 82 (219)
T ss_dssp HHHHHHHHHTT-------TTTHHHHHHHHHHHHHCC---CEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHH
T ss_pred hhhHHHHHHHh-------hccccHHHHHHHHHhcCC---CCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHH
Confidence 45677666543 112245556666676654 334 9999999999999999987334899999999999999
Q ss_pred HHHhhcCC--CCcEEEEeecCCCCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 108 LRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 108 ~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+++....+ ++++++++|+.++++++++||+|++.++++++.+. ..+++++.++|+|||++++.+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~-------~~~l~~~~~~L~pgG~l~~~~~~ 150 (219)
T 3dlc_A 83 LKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFWEDV-------ATAFREIYRILKSGGKTYIGGGF 150 (219)
T ss_dssp HHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGGCSCH-------HHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhhccCH-------HHHHHHHHHhCCCCCEEEEEecc
Confidence 88765544 47999999999999999999999999999998553 48999999999999999998754
No 18
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.60 E-value=1.8e-15 Score=151.66 Aligned_cols=104 Identities=18% Similarity=0.229 Sum_probs=91.7
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEeccccccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDAL 147 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~l 147 (659)
++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++... +++++++|+.++ +++++||+|++.++++|+
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~---~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~ 116 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD---GITYIHSRFEDA-QLPRRYDNIVLTHVLEHI 116 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS---CEEEEESCGGGC-CCSSCEEEEEEESCGGGC
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC---CeEEEEccHHHc-CcCCcccEEEEhhHHHhh
Confidence 567999999999999999998876 899999999999988776532 799999999987 467899999999999999
Q ss_pred CCcccchHHHHHHHHHHH-hccccCeEEEEEEcCCch
Q 006149 148 MEPELGHKLGNQYLSEVK-RLLKSGGKFVCLTLAESH 183 (659)
Q Consensus 148 ~~~~~~~~~~~~~l~ei~-rvLkpGG~lvi~~~~~~~ 183 (659)
.++. .+++++. ++|||||++++.+.....
T Consensus 117 ~~~~-------~~l~~~~~~~LkpgG~l~i~~~~~~~ 146 (250)
T 2p7i_A 117 DDPV-------ALLKRINDDWLAEGGRLFLVCPNANA 146 (250)
T ss_dssp SSHH-------HHHHHHHHTTEEEEEEEEEEEECTTC
T ss_pred cCHH-------HHHHHHHHHhcCCCCEEEEEcCChHH
Confidence 7654 8999999 999999999999876443
No 19
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.60 E-value=3.4e-15 Score=154.70 Aligned_cols=157 Identities=15% Similarity=0.222 Sum_probs=117.7
Q ss_pred hhhhhcccCCCCHhhHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEE
Q 006149 16 TDLLQTLGDFTSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGIT 95 (659)
Q Consensus 16 ~~lp~~~~~f~~~eyWd~~y~~~~~~~~fewy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~Vt 95 (659)
+.+|..+.+-...++|+.++... ...+..+...+..++.. .++.+|||+|||+|.++..|++.+. +|+
T Consensus 16 ~~~~~~y~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~~~-~v~ 83 (293)
T 3thr_A 16 EGIPDQYADGEAARVWQLYIGDT--------RSRTAEYKAWLLGLLRQ---HGCHRVLDVACGTGVDSIMLVEEGF-SVT 83 (293)
T ss_dssp TTSCCTTTTCHHHHHHHHHHTCC--------SCBCHHHHHHHHHHHHH---TTCCEEEETTCTTSHHHHHHHHTTC-EEE
T ss_pred ccChhhhcCchHHHHHHHHHhcC--------cchHHHHHHHHHHHhcc---cCCCEEEEecCCCCHHHHHHHHCCC-eEE
Confidence 34555444334456888877433 11234455566666654 4678999999999999999999987 999
Q ss_pred EEcCCHHHHHHHHHHhhcCC-----CCcEEEEeecCCCC---CCCCcccEEEec-ccccccCCcccchHHHHHHHHHHHh
Q 006149 96 NVDFSKVVISDMLRRNVRDR-----SDMRWRVMDMTSMQ---FMDETFDVILDK-GGLDALMEPELGHKLGNQYLSEVKR 166 (659)
Q Consensus 96 gvD~S~~~i~~~~~~~~~~~-----~~i~~~~~D~~~l~---~~~~sFDvVi~~-g~l~~l~~~~~~~~~~~~~l~ei~r 166 (659)
|+|+|+.+++.++++..... .++.+..+|+.+++ +++++||+|++. .+++++.+..........+++++++
T Consensus 84 gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~ 163 (293)
T 3thr_A 84 SVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIAS 163 (293)
T ss_dssp EEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHH
T ss_pred EEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHH
Confidence 99999999998877653322 46889999999987 788999999998 7999988722112236799999999
Q ss_pred ccccCeEEEEEEcCCchh
Q 006149 167 LLKSGGKFVCLTLAESHV 184 (659)
Q Consensus 167 vLkpGG~lvi~~~~~~~~ 184 (659)
+|||||++++.......+
T Consensus 164 ~LkpgG~l~~~~~~~~~~ 181 (293)
T 3thr_A 164 MVRPGGLLVIDHRNYDYI 181 (293)
T ss_dssp TEEEEEEEEEEEECHHHH
T ss_pred HcCCCeEEEEEeCCHHHH
Confidence 999999999988764443
No 20
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.59 E-value=7.8e-15 Score=148.66 Aligned_cols=112 Identities=16% Similarity=0.253 Sum_probs=97.7
Q ss_pred HHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCccc
Q 006149 57 LISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFD 136 (659)
Q Consensus 57 l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFD 136 (659)
+..++.. .++.+|||+|||+|.++..+++.+..+|+|+|+|+.+++.++++.. ..++.++++|+.++++++++||
T Consensus 36 l~~~~~~---~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~~~~~~~fD 110 (253)
T 3g5l_A 36 LKKMLPD---FNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT--SPVVCYEQKAIEDIAIEPDAYN 110 (253)
T ss_dssp HHTTCCC---CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC--CTTEEEEECCGGGCCCCTTCEE
T ss_pred HHHhhhc---cCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc--cCCeEEEEcchhhCCCCCCCeE
Confidence 4444443 5788999999999999999999987799999999999998877653 5789999999999998889999
Q ss_pred EEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 137 VILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 137 vVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+|++..+++++.+. ..+++++.++|||||++++....
T Consensus 111 ~v~~~~~l~~~~~~-------~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 111 VVLSSLALHYIASF-------DDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp EEEEESCGGGCSCH-------HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEchhhhhhhhH-------HHHHHHHHHHcCCCcEEEEEeCC
Confidence 99999999998553 49999999999999999998765
No 21
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.59 E-value=1.8e-15 Score=152.99 Aligned_cols=107 Identities=13% Similarity=0.155 Sum_probs=94.6
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEecccccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~ 146 (659)
.++.+|||+|||+|.++..++..+..+|+++|+|+.+++.++++.... .++.++++|+.++++++++||+|++..++++
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 170 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM-PVGKFILASMETATLPPNTYDLIVIQWTAIY 170 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS-SEEEEEESCGGGCCCCSSCEEEEEEESCGGG
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC-CceEEEEccHHHCCCCCCCeEEEEEcchhhh
Confidence 567899999999999999998887668999999999999887776433 6799999999999988899999999999999
Q ss_pred cCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 147 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 147 l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
+.+.+ ...+++++.++|||||++++.+.
T Consensus 171 ~~~~~-----~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 171 LTDAD-----FVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp SCHHH-----HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHH-----HHHHHHHHHHhcCCCeEEEEEec
Confidence 85433 56999999999999999999885
No 22
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.59 E-value=5.5e-15 Score=146.29 Aligned_cols=104 Identities=20% Similarity=0.243 Sum_probs=92.0
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEecccccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~ 146 (659)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++.. .++.++++|+.+++++ ++||+|++..++++
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~---~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~ 118 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLP---KEFSITEGDFLSFEVP-TSIDTIVSTYAFHH 118 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSC---TTCCEESCCSSSCCCC-SCCSEEEEESCGGG
T ss_pred cCCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCC---CceEEEeCChhhcCCC-CCeEEEEECcchhc
Confidence 3678999999999999999999876 99999999999998876653 6899999999999887 99999999999999
Q ss_pred cCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 147 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 147 l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+.+++ ...+++++.++|||||++++.+..
T Consensus 119 ~~~~~-----~~~~l~~~~~~LkpgG~l~i~~~~ 147 (220)
T 3hnr_A 119 LTDDE-----KNVAIAKYSQLLNKGGKIVFADTI 147 (220)
T ss_dssp SCHHH-----HHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred CChHH-----HHHHHHHHHHhcCCCCEEEEEecc
Confidence 87654 345999999999999999999754
No 23
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.59 E-value=5.8e-15 Score=150.36 Aligned_cols=113 Identities=16% Similarity=0.265 Sum_probs=97.5
Q ss_pred HHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCCCCCcc
Q 006149 57 LISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQFMDETF 135 (659)
Q Consensus 57 l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~~~~sF 135 (659)
+.+.+.. .++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++....+ +++.++++|+.++++++++|
T Consensus 29 l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~f 104 (260)
T 1vl5_A 29 LMQIAAL---KGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERF 104 (260)
T ss_dssp HHHHHTC---CSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCE
T ss_pred HHHHhCC---CCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCE
Confidence 4455543 4778999999999999999998875 99999999999999887765544 67999999999999999999
Q ss_pred cEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 136 DVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 136 DvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
|+|++..+++++.+.. .++.++.++|||||++++.+..
T Consensus 105 D~V~~~~~l~~~~d~~-------~~l~~~~r~LkpgG~l~~~~~~ 142 (260)
T 1vl5_A 105 HIVTCRIAAHHFPNPA-------SFVSEAYRVLKKGGQLLLVDNS 142 (260)
T ss_dssp EEEEEESCGGGCSCHH-------HHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEEEEhhhhHhcCCHH-------HHHHHHHHHcCCCCEEEEEEcC
Confidence 9999999999997654 9999999999999999998654
No 24
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.59 E-value=1.3e-15 Score=156.11 Aligned_cols=150 Identities=15% Similarity=0.153 Sum_probs=106.0
Q ss_pred CCCCHhhHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHH
Q 006149 24 DFTSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVV 103 (659)
Q Consensus 24 ~f~~~eyWd~~y~~~~~~~~fewy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~ 103 (659)
.|....||+.+|.... ...+. .+....+...+.+++.. ...++.+|||||||+|.++..++..++.+|+|+|+|+.|
T Consensus 14 ~~~~~~~~~~~y~~~~-~~~~~-~~~~~~~~~~~~~~~~~-~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~ 90 (263)
T 2a14_A 14 HFLPRDYLATYYSFDG-SPSPE-AEMLKFNLECLHKTFGP-GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRN 90 (263)
T ss_dssp HCCHHHHHHHHCCCCC-SCCHH-HHHHHHHHHHHHHHHST-TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHH
T ss_pred ccCHHHHHHHhcCCCc-ccchh-hHHHHHHHHHHHHHhcC-CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHH
Confidence 3677899999997652 11110 00011122334444432 224678999999999999888878887789999999999
Q ss_pred HHHHHHHhhcCC------------------------------CCcE-EEEeecCCC-CC---CCCcccEEEecccccccC
Q 006149 104 ISDMLRRNVRDR------------------------------SDMR-WRVMDMTSM-QF---MDETFDVILDKGGLDALM 148 (659)
Q Consensus 104 i~~~~~~~~~~~------------------------------~~i~-~~~~D~~~l-~~---~~~sFDvVi~~g~l~~l~ 148 (659)
++.++++..... .++. ++++|+.+. |+ ..++||+|++..+|+++.
T Consensus 91 l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~ 170 (263)
T 2a14_A 91 REELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECAC 170 (263)
T ss_dssp HHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHC
T ss_pred HHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhc
Confidence 998876653321 1233 889999984 43 257999999999999864
Q ss_pred CcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 149 EPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 149 ~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
... .....++++++++|||||+|++.+.
T Consensus 171 ~~~---~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 171 CSL---DAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp SSH---HHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCH---HHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 321 1266899999999999999999874
No 25
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.59 E-value=4.5e-15 Score=149.00 Aligned_cols=115 Identities=27% Similarity=0.414 Sum_probs=98.7
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCC
Q 006149 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFM 131 (659)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~ 131 (659)
.+...+..++. ++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++. ...++.++++|+.+++++
T Consensus 42 ~~~~~l~~~~~-----~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~--~~~~~~~~~~d~~~~~~~ 113 (242)
T 3l8d_A 42 TIIPFFEQYVK-----KEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERG--EGPDLSFIKGDLSSLPFE 113 (242)
T ss_dssp THHHHHHHHSC-----TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTT--CBTTEEEEECBTTBCSSC
T ss_pred HHHHHHHHHcC-----CCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhc--ccCCceEEEcchhcCCCC
Confidence 44555666653 578999999999999999999976 9999999999998776543 347899999999999998
Q ss_pred CCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 132 DETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 132 ~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
+++||+|++.++++++.+. ..+++++.++|+|||++++.++..
T Consensus 114 ~~~fD~v~~~~~l~~~~~~-------~~~l~~~~~~L~pgG~l~i~~~~~ 156 (242)
T 3l8d_A 114 NEQFEAIMAINSLEWTEEP-------LRALNEIKRVLKSDGYACIAILGP 156 (242)
T ss_dssp TTCEEEEEEESCTTSSSCH-------HHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CCCccEEEEcChHhhccCH-------HHHHHHHHHHhCCCeEEEEEEcCC
Confidence 9999999999999998654 489999999999999999998653
No 26
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.59 E-value=2.9e-15 Score=146.58 Aligned_cols=115 Identities=15% Similarity=0.146 Sum_probs=98.0
Q ss_pred HHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCC
Q 006149 54 RDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDE 133 (659)
Q Consensus 54 ~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~ 133 (659)
...+..++.. .+.+|||+|||+|.++..|+..+. +|+|+|+|+.+++.++++ .+++.++++|+.+++++++
T Consensus 31 ~~~l~~~~~~----~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~----~~~~~~~~~d~~~~~~~~~ 101 (203)
T 3h2b_A 31 RVLIEPWATG----VDGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQT----HPSVTFHHGTITDLSDSPK 101 (203)
T ss_dssp HHHHHHHHHH----CCSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHH----CTTSEEECCCGGGGGGSCC
T ss_pred HHHHHHHhcc----CCCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHh----CCCCeEEeCcccccccCCC
Confidence 3345555543 368999999999999999999976 999999999999987665 3589999999999998889
Q ss_pred cccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCc
Q 006149 134 TFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (659)
Q Consensus 134 sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~ 182 (659)
+||+|++..+++++...+ ...+++++.++|+|||++++.++..+
T Consensus 102 ~fD~v~~~~~l~~~~~~~-----~~~~l~~~~~~L~pgG~l~i~~~~~~ 145 (203)
T 3h2b_A 102 RWAGLLAWYSLIHMGPGE-----LPDALVALRMAVEDGGGLLMSFFSGP 145 (203)
T ss_dssp CEEEEEEESSSTTCCTTT-----HHHHHHHHHHTEEEEEEEEEEEECCS
T ss_pred CeEEEEehhhHhcCCHHH-----HHHHHHHHHHHcCCCcEEEEEEccCC
Confidence 999999999999986433 56999999999999999999886543
No 27
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.58 E-value=8.8e-15 Score=149.83 Aligned_cols=107 Identities=20% Similarity=0.341 Sum_probs=94.7
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCcccEEEecccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGL 144 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDvVi~~g~l 144 (659)
.++.+|||+|||+|.++..+++....+|+++|+|+.+++.++++....+ .++.++++|+.++++++++||+|++.+++
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 139 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESL 139 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCT
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechh
Confidence 5788999999999999999988633599999999999999887765544 46999999999999988999999999999
Q ss_pred cccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+++.+. ..+++++.++|||||++++.++.
T Consensus 140 ~~~~~~-------~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 140 HHMPDR-------GRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp TTSSCH-------HHHHHHHHTTEEEEEEEEEEEEE
T ss_pred hhCCCH-------HHHHHHHHHHcCCCeEEEEEEee
Confidence 998664 49999999999999999998865
No 28
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.58 E-value=3e-15 Score=146.36 Aligned_cols=136 Identities=20% Similarity=0.269 Sum_probs=102.4
Q ss_pred hHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Q 006149 30 NWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLR 109 (659)
Q Consensus 30 yWd~~y~~~~~~~~fewy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~ 109 (659)
||+++|... ...|..........+...+. ++ +|||+|||+|.++..+++.+. +|+++|+|+.+++.+++
T Consensus 1 ~W~~~y~~~----~~~~~~~~~~~l~~~~~~~~-----~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~ 69 (202)
T 2kw5_A 1 MWDERFSQS----EYVYGTEPNDFLVSVANQIP-----QG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQ 69 (202)
T ss_dssp CCCCCCCCC----CCCCCCCCCSSHHHHHHHSC-----SS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHH
T ss_pred Chhhhhccc----chhhccCchHHHHHHHHhCC-----CC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHH
Confidence 577766544 12233332233233334342 45 999999999999999998876 99999999999999988
Q ss_pred HhhcCCCCcEEEEeecCCCCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCch
Q 006149 110 RNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (659)
Q Consensus 110 ~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~ 183 (659)
+....+.++.++++|+.++++++++||+|++. +.++... ....+++++.++|+|||++++.++....
T Consensus 70 ~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~--~~~~~~~-----~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 136 (202)
T 2kw5_A 70 LAQEKGVKITTVQSNLADFDIVADAWEGIVSI--FCHLPSS-----LRQQLYPKVYQGLKPGGVFILEGFAPEQ 136 (202)
T ss_dssp HHHHHTCCEEEECCBTTTBSCCTTTCSEEEEE--CCCCCHH-----HHHHHHHHHHTTCCSSEEEEEEEECTTT
T ss_pred HHHhcCCceEEEEcChhhcCCCcCCccEEEEE--hhcCCHH-----HHHHHHHHHHHhcCCCcEEEEEEecccc
Confidence 77655568999999999998888999999984 3333211 2679999999999999999999876443
No 29
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.58 E-value=7.8e-15 Score=152.90 Aligned_cols=118 Identities=12% Similarity=0.202 Sum_probs=100.1
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHH--cCCCeEEEEcCCHHHHHHHHHHhhcC---CCCcEEEEeecC
Q 006149 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYD--AGFHGITNVDFSKVVISDMLRRNVRD---RSDMRWRVMDMT 126 (659)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~--~g~~~VtgvD~S~~~i~~~~~~~~~~---~~~i~~~~~D~~ 126 (659)
.+...+..+.. .++.+|||+|||+|..+..|++ .+..+|+|+|+|+.+++.++++.... .++++++++|+.
T Consensus 24 ~~~~~l~~~~~----~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 99 (299)
T 3g5t_A 24 DFYKMIDEYHD----GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSD 99 (299)
T ss_dssp HHHHHHHHHCC----SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTT
T ss_pred HHHHHHHHHhc----CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHH
Confidence 44555666654 3678999999999999999996 34569999999999999998877655 578999999999
Q ss_pred CCCCCC------CcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 127 SMQFMD------ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 127 ~l~~~~------~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
++++++ ++||+|++..+++++ + ...+++++.++|+|||++++.++..
T Consensus 100 ~~~~~~~~~~~~~~fD~V~~~~~l~~~-~-------~~~~l~~~~~~LkpgG~l~i~~~~~ 152 (299)
T 3g5t_A 100 DFKFLGADSVDKQKIDMITAVECAHWF-D-------FEKFQRSAYANLRKDGTIAIWGYAD 152 (299)
T ss_dssp CCGGGCTTTTTSSCEEEEEEESCGGGS-C-------HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred hCCccccccccCCCeeEEeHhhHHHHh-C-------HHHHHHHHHHhcCCCcEEEEEecCC
Confidence 998877 899999999999998 4 3599999999999999999966653
No 30
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.57 E-value=1.8e-14 Score=145.87 Aligned_cols=119 Identities=17% Similarity=0.063 Sum_probs=100.2
Q ss_pred hhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCC
Q 006149 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS 127 (659)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~ 127 (659)
++.....+...+.. .++.+|||+|||+|.++..+++....+|+|+|+|+.+++.++++....+ .++.++++|+.+
T Consensus 21 ~~~~~~~l~~~~~~---~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~ 97 (256)
T 1nkv_A 21 TEEKYATLGRVLRM---KPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG 97 (256)
T ss_dssp CHHHHHHHHHHTCC---CTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT
T ss_pred CHHHHHHHHHhcCC---CCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHh
Confidence 34455556666654 5788999999999999999988732489999999999999988775544 479999999999
Q ss_pred CCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 128 MQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 128 l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
+++ +++||+|++.++++++.+.. .+++++.++|||||++++.+.
T Consensus 98 ~~~-~~~fD~V~~~~~~~~~~~~~-------~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 98 YVA-NEKCDVAACVGATWIAGGFA-------GAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp CCC-SSCEEEEEEESCGGGTSSSH-------HHHHHHTTSEEEEEEEEEEEE
T ss_pred CCc-CCCCCEEEECCChHhcCCHH-------HHHHHHHHHcCCCeEEEEecC
Confidence 987 78999999999999987654 899999999999999999875
No 31
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.56 E-value=2.9e-14 Score=142.56 Aligned_cols=123 Identities=20% Similarity=0.300 Sum_probs=101.3
Q ss_pred hhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcC-CCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCC
Q 006149 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM 128 (659)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g-~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l 128 (659)
+......+..++.. ..++.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.++++.... .++.++++|+.++
T Consensus 28 ~~~~~~~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~ 104 (234)
T 3dtn_A 28 FDDFYGVSVSIASV--DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN-LKVKYIEADYSKY 104 (234)
T ss_dssp HHHHHHHHHHTCCC--SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC-TTEEEEESCTTTC
T ss_pred HHHHHHHHHHHhhc--CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC-CCEEEEeCchhcc
Confidence 33444556666652 2467899999999999999999883 359999999999999887776443 3899999999999
Q ss_pred CCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 129 QFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 129 ~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
+++ ++||+|++..+++++.+++ ...+++++.++|||||++++.+...
T Consensus 105 ~~~-~~fD~v~~~~~l~~~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~~ 151 (234)
T 3dtn_A 105 DFE-EKYDMVVSALSIHHLEDED-----KKELYKRSYSILKESGIFINADLVH 151 (234)
T ss_dssp CCC-SCEEEEEEESCGGGSCHHH-----HHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred CCC-CCceEEEEeCccccCCHHH-----HHHHHHHHHHhcCCCcEEEEEEecC
Confidence 887 8999999999999985543 4579999999999999999998753
No 32
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.55 E-value=1.8e-14 Score=146.33 Aligned_cols=109 Identities=16% Similarity=0.257 Sum_probs=95.5
Q ss_pred CCCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEecccc
Q 006149 66 SSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGL 144 (659)
Q Consensus 66 ~~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l 144 (659)
..++.+|||+|||+|.++..+++. +. +|+|+|+|+.+++.++++.... ++++++++|+.++++++++||+|++..++
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 130 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGN-NKIIFEANDILTKEFPENNFDLIYSRDAI 130 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSC-TTEEEEECCTTTCCCCTTCEEEEEEESCG
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcC-CCeEEEECccccCCCCCCcEEEEeHHHHH
Confidence 367889999999999999999987 65 9999999999999887665443 78999999999999989999999999999
Q ss_pred cccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
+++...+ ...+++++.++|||||++++.++..
T Consensus 131 ~~~~~~~-----~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 131 LALSLEN-----KNKLFQKCYKWLKPTGTLLITDYCA 162 (266)
T ss_dssp GGSCHHH-----HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred HhcChHH-----HHHHHHHHHHHcCCCCEEEEEEecc
Confidence 9984332 5699999999999999999998653
No 33
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.55 E-value=1.9e-14 Score=141.65 Aligned_cols=114 Identities=16% Similarity=0.218 Sum_probs=96.2
Q ss_pred HHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcc
Q 006149 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETF 135 (659)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sF 135 (659)
.+...+.. ..++.+|||+|||+|.++..++..+. +|+++|+|+.+++.+++ ...++++++++|+.++ +++++|
T Consensus 36 ~~~~~l~~--~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~---~~~~~~~~~~~d~~~~-~~~~~~ 108 (218)
T 3ou2_A 36 AALERLRA--GNIRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGR---HGLDNVEFRQQDLFDW-TPDRQW 108 (218)
T ss_dssp HHHHHHTT--TTSCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGG---GCCTTEEEEECCTTSC-CCSSCE
T ss_pred HHHHHHhc--CCCCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHh---cCCCCeEEEecccccC-CCCCce
Confidence 34455542 14567999999999999999999876 99999999999987755 2337899999999998 778999
Q ss_pred cEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 136 DVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 136 DvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
|+|++..+++++.++. ...+++++.++|+|||++++.+...
T Consensus 109 D~v~~~~~l~~~~~~~-----~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 109 DAVFFAHWLAHVPDDR-----FEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp EEEEEESCGGGSCHHH-----HHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred eEEEEechhhcCCHHH-----HHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 9999999999987643 5699999999999999999999764
No 34
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.55 E-value=6.9e-14 Score=134.68 Aligned_cols=104 Identities=25% Similarity=0.390 Sum_probs=89.4
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEec-ccccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDK-GGLDA 146 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~-g~l~~ 146 (659)
++.+|||+|||+|.++..++..+. +++++|+++.+++.++++. +++.++++|+.++++++++||+|++. .++++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~ 120 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDF----PEARWVVGDLSVDQISETDFDLIVSAGNVMGF 120 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC----TTSEEEECCTTTSCCCCCCEEEEEECCCCGGG
T ss_pred CCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhC----CCCcEEEcccccCCCCCCceeEEEECCcHHhh
Confidence 678999999999999999999875 9999999999999876654 46899999999988888899999998 56776
Q ss_pred cCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 147 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 147 l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
+.... ...+++++.++|+|||++++.....
T Consensus 121 ~~~~~-----~~~~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 121 LAEDG-----REPALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp SCHHH-----HHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred cChHH-----HHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 64332 5799999999999999999987654
No 35
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.55 E-value=1.2e-14 Score=146.29 Aligned_cols=135 Identities=15% Similarity=0.082 Sum_probs=104.1
Q ss_pred CCHhhHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHH
Q 006149 26 TSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVIS 105 (659)
Q Consensus 26 ~~~eyWd~~y~~~~~~~~fewy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~ 105 (659)
...+||..+.... ......+...+..++.. ..++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++
T Consensus 9 ~~~~~y~~~~~~~--------~~~~~~~~~~~~~~l~~--~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~ 77 (240)
T 3dli_A 9 HTSDYYFLFEEKF--------RGSRELVKARLRRYIPY--FKGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIK 77 (240)
T ss_dssp ---CHHHHHHHHH--------TCCHHHHHHHHGGGGGG--TTTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHH
T ss_pred chHHHHHHHHHHh--------CCCHHHHHHHHHHHHhh--hcCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHH
Confidence 3455777654433 22334455555555543 13568999999999999999999876 8999999999988
Q ss_pred HHHHHhhcCCCCcEEEEeecCCC--CCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCch
Q 006149 106 DMLRRNVRDRSDMRWRVMDMTSM--QFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (659)
Q Consensus 106 ~~~~~~~~~~~~i~~~~~D~~~l--~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~ 183 (659)
.++++ +.++++|+.+. ++++++||+|++.++++++.+++ ...+++++.++|||||++++.+.....
T Consensus 78 ~a~~~-------~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~~~~ 145 (240)
T 3dli_A 78 FCEGK-------FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDPER-----LFELLSLCYSKMKYSSYIVIESPNPTS 145 (240)
T ss_dssp HHHTT-------SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCGGG-----HHHHHHHHHHHBCTTCCEEEEEECTTS
T ss_pred HHHhh-------cceeeccHHHHhhhcCCCCeeEEEECCchhhCCcHH-----HHHHHHHHHHHcCCCcEEEEEeCCcch
Confidence 66433 88999999886 78889999999999999997554 569999999999999999998876433
No 36
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.55 E-value=2.8e-14 Score=143.84 Aligned_cols=116 Identities=18% Similarity=0.237 Sum_probs=99.9
Q ss_pred HHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCCCCC
Q 006149 55 DPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQFMDE 133 (659)
Q Consensus 55 ~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~~~~ 133 (659)
..+...+.. .++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++....+ +++.++++|+.+++++++
T Consensus 11 ~~~~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 86 (239)
T 1xxl_A 11 GLMIKTAEC---RAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDD 86 (239)
T ss_dssp HHHHHHHTC---CTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTT
T ss_pred chHHHHhCc---CCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCC
Confidence 345555554 6788999999999999999998875 99999999999998877765443 579999999999999889
Q ss_pred cccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 134 TFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 134 sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
+||+|++..+++++.+. ..++.++.++|||||++++.+...
T Consensus 87 ~fD~v~~~~~l~~~~~~-------~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 87 SFDIITCRYAAHHFSDV-------RKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp CEEEEEEESCGGGCSCH-------HHHHHHHHHHEEEEEEEEEEEECB
T ss_pred cEEEEEECCchhhccCH-------HHHHHHHHHHcCCCcEEEEEEcCC
Confidence 99999999999998754 489999999999999999987653
No 37
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.55 E-value=3e-14 Score=143.66 Aligned_cols=146 Identities=14% Similarity=0.182 Sum_probs=106.4
Q ss_pred CHhhHHHHHhhcC-CCCccccccc-hhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHH
Q 006149 27 SKENWDKFFTIRG-IGDSFEWYAE-WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVI 104 (659)
Q Consensus 27 ~~eyWd~~y~~~~-~~~~fewy~~-~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i 104 (659)
..++|+++|.... .....-|... .......+..++.. ..++.+|||+|||+|.++..|++.+. +|+++|+|+.++
T Consensus 15 ~~~~w~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~ 91 (245)
T 3ggd_A 15 VADAWEQYWNKTLVNSTPVLWDANVERAVVVDLPRFELL--FNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSAL 91 (245)
T ss_dssp HHHHHHHHHHHHHHHTCCCTTCCCGGGTHHHHHHHHTTT--SCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHH
T ss_pred hHHHHHHHHHhcccCCccceecchhHHHHHHHHHHHhhc--cCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHH
Confidence 3556666665431 0111223222 22233344444432 24678999999999999999999887 999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEeecCCCCCCC-----CcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 105 SDMLRRNVRDRSDMRWRVMDMTSMQFMD-----ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 105 ~~~~~~~~~~~~~i~~~~~D~~~l~~~~-----~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
+.++++. ...+++++++|+.++++.. ..||+|++..+++++...+ ...+++++.++|||||++++.++
T Consensus 92 ~~a~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~-----~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 92 EIAAKEN--TAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGFHHIPVEK-----RELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp HHHHHHS--CCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSSTTSCGGG-----HHHHHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHHhC--cccCceEEECcccccccccccccccCccEEEEcchhhcCCHHH-----HHHHHHHHHHHcCCCCEEEEEeC
Confidence 9887765 3458999999999875432 2499999999999986444 56999999999999999999988
Q ss_pred CCc
Q 006149 180 AES 182 (659)
Q Consensus 180 ~~~ 182 (659)
..+
T Consensus 165 ~~~ 167 (245)
T 3ggd_A 165 GTG 167 (245)
T ss_dssp CTT
T ss_pred Ccc
Confidence 643
No 38
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.55 E-value=1.7e-14 Score=142.02 Aligned_cols=102 Identities=25% Similarity=0.355 Sum_probs=90.1
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEeccccccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDAL 147 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~l 147 (659)
++.+|||+|||+|.++..+ +..+|+++|+|+.+++.++++. +++.++++|+.++++++++||+|++..+++++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 108 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA----PEATWVRAWGEALPFPGESFDVVLLFTTLEFV 108 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC----TTSEEECCCTTSCCSCSSCEEEEEEESCTTTC
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcccccCCCCCCcEEEEEEcChhhhc
Confidence 6789999999999999887 5458999999999999886654 67999999999999988999999999999998
Q ss_pred CCcccchHHHHHHHHHHHhccccCeEEEEEEcCCch
Q 006149 148 MEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (659)
Q Consensus 148 ~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~ 183 (659)
.+. ..+++++.++|||||++++.++....
T Consensus 109 ~~~-------~~~l~~~~~~L~pgG~l~i~~~~~~~ 137 (211)
T 2gs9_A 109 EDV-------ERVLLEARRVLRPGGALVVGVLEALS 137 (211)
T ss_dssp SCH-------HHHHHHHHHHEEEEEEEEEEEECTTS
T ss_pred CCH-------HHHHHHHHHHcCCCCEEEEEecCCcC
Confidence 754 49999999999999999999876543
No 39
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.54 E-value=3.9e-14 Score=140.25 Aligned_cols=118 Identities=16% Similarity=0.118 Sum_probs=96.6
Q ss_pred HHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcC-CCeEEEEcCCHHHHHHHHHHhhcCC------CCcEEEEeecC
Q 006149 54 RDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR------SDMRWRVMDMT 126 (659)
Q Consensus 54 ~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g-~~~VtgvD~S~~~i~~~~~~~~~~~------~~i~~~~~D~~ 126 (659)
...+.+++.. .++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.++++....+ .++.++++|+.
T Consensus 18 ~~~l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (217)
T 3jwh_A 18 MNGVVAALKQ---SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALT 94 (217)
T ss_dssp HHHHHHHHHH---TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTT
T ss_pred HHHHHHHHHh---cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcc
Confidence 3345555543 467899999999999999999875 3699999999999999987765433 27999999998
Q ss_pred CCCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 127 SMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 127 ~l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
..+.++++||+|++..+++++.++. ...+++++.++|||||++++...
T Consensus 95 ~~~~~~~~fD~v~~~~~l~~~~~~~-----~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 95 YQDKRFHGYDAATVIEVIEHLDLSR-----LGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp SCCGGGCSCSEEEEESCGGGCCHHH-----HHHHHHHHHTTTCCSEEEEEEEB
T ss_pred cccccCCCcCEEeeHHHHHcCCHHH-----HHHHHHHHHHHcCCCEEEEEccC
Confidence 8887778999999999999986543 56999999999999997666554
No 40
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.54 E-value=9.4e-15 Score=148.50 Aligned_cols=149 Identities=16% Similarity=0.180 Sum_probs=107.3
Q ss_pred CCCCHhhHHHHHhhcCCCCcc--ccccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCH
Q 006149 24 DFTSKENWDKFFTIRGIGDSF--EWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSK 101 (659)
Q Consensus 24 ~f~~~eyWd~~y~~~~~~~~f--ewy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~ 101 (659)
.|.+.+||+.+|.... ..+ .++..+ ....+..++.. ...++.+|||+|||+|.++..++..+..+|+++|+|+
T Consensus 15 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~l~~~~~~-~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~ 89 (265)
T 2i62_A 15 HFNPRDYLEKYYSFGS--RHCAENEILRH--LLKNLFKIFCL-GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTD 89 (265)
T ss_dssp HCCHHHHHHHHHCCCS--SCHHHHHHHHH--HHHHHHHHHHS-SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCH
T ss_pred hcCHHHHHHHHhCcCC--cchhHHHHHHh--hHHHHHHHhcc-cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCH
Confidence 3667889999997651 111 111111 11223333332 2246689999999999999999888766899999999
Q ss_pred HHHHHHHHHhhcCCC------------------------------Cc-EEEEeecCCCC-CCC---CcccEEEecccccc
Q 006149 102 VVISDMLRRNVRDRS------------------------------DM-RWRVMDMTSMQ-FMD---ETFDVILDKGGLDA 146 (659)
Q Consensus 102 ~~i~~~~~~~~~~~~------------------------------~i-~~~~~D~~~l~-~~~---~sFDvVi~~g~l~~ 146 (659)
.+++.++++...... ++ .++++|+.+.+ +++ ++||+|++..++++
T Consensus 90 ~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~ 169 (265)
T 2i62_A 90 QNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDA 169 (265)
T ss_dssp HHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHH
T ss_pred HHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhh
Confidence 999988777643211 17 89999999874 355 89999999999996
Q ss_pred cCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 147 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 147 l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+.... .....+++++.++|||||++++.+..
T Consensus 170 ~~~~~---~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 170 ACPDL---PAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp HCSSH---HHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred hcCCh---HHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 64331 12679999999999999999998743
No 41
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.54 E-value=2.8e-14 Score=141.58 Aligned_cols=110 Identities=28% Similarity=0.370 Sum_probs=94.1
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEeccccccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDAL 147 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~l 147 (659)
++.+|||+|||+|.++..++..+. +|+++|+|+.+++.++++......+++++++|+.++++++++||+|++..++++.
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~ 116 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHF 116 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGC
T ss_pred CCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHhC
Confidence 478999999999999999999876 9999999999999998877666688999999999988888899999999885443
Q ss_pred CCcccchHHHHHHHHHHHhccccCeEEEEEEcCCch
Q 006149 148 MEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (659)
Q Consensus 148 ~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~ 183 (659)
...+ ...+++++.++|+|||++++.+...+.
T Consensus 117 ~~~~-----~~~~l~~~~~~L~~gG~l~~~~~~~~~ 147 (227)
T 1ve3_A 117 EPLE-----LNQVFKEVRRVLKPSGKFIMYFTDLRE 147 (227)
T ss_dssp CHHH-----HHHHHHHHHHHEEEEEEEEEEEECHHH
T ss_pred CHHH-----HHHHHHHHHHHcCCCcEEEEEecChHH
Confidence 2222 568999999999999999999876433
No 42
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.54 E-value=1.7e-14 Score=147.12 Aligned_cols=134 Identities=17% Similarity=0.152 Sum_probs=103.5
Q ss_pred HhhHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHH
Q 006149 28 KENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDM 107 (659)
Q Consensus 28 ~eyWd~~y~~~~~~~~fewy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~ 107 (659)
.++|+..+.... ..|......+...+...+ .++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+
T Consensus 19 a~~yd~~~~~~~----~~~~~~~~~~~~~l~~~~-----~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a 88 (263)
T 3pfg_A 19 AELYDLVHQGKG----KDYHREAADLAALVRRHS-----PKAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIA 88 (263)
T ss_dssp HHHHHHHHHHTT----CCHHHHHHHHHHHHHHHC-----TTCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHH
T ss_pred HHHHHHHhhcCC----CCHHHHHHHHHHHHHhhC-----CCCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHH
Confidence 467777776431 122222233333444443 2468999999999999999998876 899999999999988
Q ss_pred HHHhhcCCCCcEEEEeecCCCCCCCCcccEEEecc-cccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 108 LRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKG-GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 108 ~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g-~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+++. +++.++++|+.++++ +++||+|++.+ +++++.+.+ ....+++++.++|||||++++..+.
T Consensus 89 ~~~~----~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~~~----~~~~~l~~~~~~L~pgG~l~i~~~~ 153 (263)
T 3pfg_A 89 RRRN----PDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAGQA----ELDAALERFAAHVLPDGVVVVEPWW 153 (263)
T ss_dssp HHHC----TTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCHHH----HHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred HhhC----CCCEEEECChHHCCc-cCCcCEEEEcCchhhhcCCHH----HHHHHHHHHHHhcCCCcEEEEEecc
Confidence 7664 379999999999887 68999999998 999985432 2678999999999999999997643
No 43
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.54 E-value=2.5e-14 Score=140.26 Aligned_cols=109 Identities=17% Similarity=0.271 Sum_probs=93.0
Q ss_pred CCCCeEEEECCCcchHH-HHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEeccccc
Q 006149 67 SPPPQILVPGCGNSRLS-EHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLD 145 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s-~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~ 145 (659)
.++.+|||+|||+|..+ ..++..+. +|+++|+|+.+++.++++......++.++++|+.++++++++||+|++.++++
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 100 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGY-KTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIF 100 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTC-EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHH
Confidence 35789999999999984 45555565 99999999999999888766556789999999999998889999999999999
Q ss_pred ccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 146 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 146 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
++...+ ...+++++.++|||||++++.++..
T Consensus 101 ~~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 101 HMRKND-----VKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp GSCHHH-----HHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred hCCHHH-----HHHHHHHHHHHcCCCcEEEEEEecc
Confidence 874222 6799999999999999999998764
No 44
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.54 E-value=5.2e-14 Score=141.03 Aligned_cols=126 Identities=19% Similarity=0.228 Sum_probs=103.3
Q ss_pred chhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCC
Q 006149 49 EWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM 128 (659)
Q Consensus 49 ~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l 128 (659)
.+......+.+++... ..++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++....+.++.++++|+.++
T Consensus 19 ~~~~~~~~~~~~l~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~ 96 (246)
T 1y8c_A 19 DYKKWSDFIIEKCVEN-NLVFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNL 96 (246)
T ss_dssp CHHHHHHHHHHHHHTT-TCCTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGC
T ss_pred cHHHHHHHHHHHHHHh-CCCCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccC
Confidence 3445555666666541 12678999999999999999999876 899999999999999887765555899999999998
Q ss_pred CCCCCcccEEEecc-cccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 129 QFMDETFDVILDKG-GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 129 ~~~~~sFDvVi~~g-~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
+++ ++||+|++.. +++++.+.+ ....+++++.++|+|||++++.....
T Consensus 97 ~~~-~~fD~v~~~~~~l~~~~~~~----~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (246)
T 1y8c_A 97 NIN-RKFDLITCCLDSTNYIIDSD----DLKKYFKAVSNHLKEGGVFIFDINSY 145 (246)
T ss_dssp CCS-CCEEEEEECTTGGGGCCSHH----HHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred Ccc-CCceEEEEcCccccccCCHH----HHHHHHHHHHHhcCCCcEEEEEecCH
Confidence 877 8999999998 999985432 26799999999999999999876653
No 45
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.54 E-value=7.1e-14 Score=144.43 Aligned_cols=105 Identities=19% Similarity=0.282 Sum_probs=93.9
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEeccccccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDAL 147 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~l 147 (659)
++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.++++....+.+++++++|+.++++ +++||+|++..+++++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~ 197 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFMFL 197 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGGS
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchhhC
Confidence 578999999999999999999987 99999999999999988776665689999999999877 7899999999999998
Q ss_pred CCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 148 MEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 148 ~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
..+. ...+++++.++|+|||+++++..
T Consensus 198 ~~~~-----~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 198 NRER-----VPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp CGGG-----HHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CHHH-----HHHHHHHHHHhcCCCcEEEEEEe
Confidence 6554 67999999999999999877654
No 46
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.54 E-value=3.9e-14 Score=143.27 Aligned_cols=137 Identities=17% Similarity=0.230 Sum_probs=101.5
Q ss_pred HhhHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHH
Q 006149 28 KENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDM 107 (659)
Q Consensus 28 ~eyWd~~y~~~~~~~~fewy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~ 107 (659)
.+||+..|.... ..+......+.+++......++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.+
T Consensus 9 a~~yd~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a 79 (252)
T 1wzn_A 9 AEYYDTIYRRRI--------ERVKAEIDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVA 79 (252)
T ss_dssp GGGHHHHTHHHH--------HTHHHHHHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHH
T ss_pred HHHHHHHHhcch--------hhhHHHHHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHH
Confidence 568888776541 11112222333333221124678999999999999999999886 999999999999999
Q ss_pred HHHhhcCCCCcEEEEeecCCCCCCCCcccEEEeccc-ccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 108 LRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGG-LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 108 ~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~-l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
+++....+.++.++++|+.+++++ ++||+|++.+. +.++ ..+ ....+++++.++|+|||++++...
T Consensus 80 ~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~-~~~----~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 80 RRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMYF-DEE----DLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp HHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGGGS-CHH----HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHhcCCceEEEECChhhcccC-CCccEEEEcCCchhcC-CHH----HHHHHHHHHHHHcCCCeEEEEecc
Confidence 887766666899999999998765 78999998744 4443 221 267999999999999999987553
No 47
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.54 E-value=6.6e-14 Score=137.84 Aligned_cols=101 Identities=25% Similarity=0.315 Sum_probs=89.8
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEeccccccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDAL 147 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~l 147 (659)
++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++. ++.+.++|+.+++ ++++||+|++.++++++
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-----~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~ 115 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRL-----GRPVRTMLFHQLD-AIDAYDAVWAHACLLHV 115 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH-----TSCCEECCGGGCC-CCSCEEEEEECSCGGGS
T ss_pred CCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhc-----CCceEEeeeccCC-CCCcEEEEEecCchhhc
Confidence 578999999999999999999876 9999999999999887765 5788999999988 77999999999999998
Q ss_pred CCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 148 MEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 148 ~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
...+ ...+++++.++|||||++++....
T Consensus 116 ~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 116 PRDE-----LADVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp CHHH-----HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CHHH-----HHHHHHHHHHhcCCCcEEEEEEcC
Confidence 6333 669999999999999999998754
No 48
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.54 E-value=1.8e-14 Score=142.50 Aligned_cols=114 Identities=16% Similarity=0.167 Sum_probs=98.1
Q ss_pred HHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcC--CCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCCCCC
Q 006149 57 LISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG--FHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQFMDE 133 (659)
Q Consensus 57 l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g--~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~~~~ 133 (659)
+.+.+.. .++.+|||+|||+|.++..+++.+ ..+|+++|+|+.+++.++++....+ ++++++++|+.+++++++
T Consensus 29 ~~~~~~~---~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~ 105 (219)
T 3dh0_A 29 VLKEFGL---KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDN 105 (219)
T ss_dssp HHHHHTC---CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSS
T ss_pred HHHHhCC---CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCC
Confidence 4455543 567899999999999999999874 3599999999999999988765544 579999999999999899
Q ss_pred cccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 134 TFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 134 sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+||+|++..+++++.+. ..+++++.++|+|||++++.++.
T Consensus 106 ~fD~v~~~~~l~~~~~~-------~~~l~~~~~~LkpgG~l~i~~~~ 145 (219)
T 3dh0_A 106 TVDFIFMAFTFHELSEP-------LKFLEELKRVAKPFAYLAIIDWK 145 (219)
T ss_dssp CEEEEEEESCGGGCSSH-------HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CeeEEEeehhhhhcCCH-------HHHHHHHHHHhCCCeEEEEEEec
Confidence 99999999999998654 48999999999999999998865
No 49
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.54 E-value=4.1e-14 Score=140.14 Aligned_cols=118 Identities=15% Similarity=0.137 Sum_probs=96.5
Q ss_pred HHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCC-CeEEEEcCCHHHHHHHHHHhhcCC------CCcEEEEeecC
Q 006149 54 RDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDR------SDMRWRVMDMT 126 (659)
Q Consensus 54 ~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~-~~VtgvD~S~~~i~~~~~~~~~~~------~~i~~~~~D~~ 126 (659)
...+.+++.. .++.+|||+|||+|.++..+++.+. .+|+|+|+|+.+++.++++....+ .+++++++|+.
T Consensus 18 ~~~l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (219)
T 3jwg_A 18 LGTVVAVLKS---VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLV 94 (219)
T ss_dssp HHHHHHHHHH---TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSS
T ss_pred HHHHHHHHhh---cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccc
Confidence 3445555543 4678999999999999999998753 699999999999999987764432 27999999998
Q ss_pred CCCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 127 SMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 127 ~l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
..++++++||+|++..+++++.+++ ...+++++.++|||||.+++...
T Consensus 95 ~~~~~~~~fD~V~~~~~l~~~~~~~-----~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 95 YRDKRFSGYDAATVIEVIEHLDENR-----LQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp SCCGGGTTCSEEEEESCGGGCCHHH-----HHHHHHHHHTTTCCSEEEEEEEB
T ss_pred ccccccCCCCEEEEHHHHHhCCHHH-----HHHHHHHHHHhhCCCEEEEEccc
Confidence 8888789999999999999986543 56999999999999996655543
No 50
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.54 E-value=4.8e-14 Score=143.09 Aligned_cols=103 Identities=17% Similarity=0.230 Sum_probs=92.2
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEecccccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~ 146 (659)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++.....+++.++++|+.++++++++||+|++..++++
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 116 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARGY-RYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWHL 116 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTTC-EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchhh
Confidence 4678999999999999999998865 999999999999988777633457899999999999988899999999999999
Q ss_pred cCCcccchHHHHHHHHHHHhccccCeEEEEE
Q 006149 147 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCL 177 (659)
Q Consensus 147 l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~ 177 (659)
+.+. ..+++++.++|+|||++++.
T Consensus 117 ~~~~-------~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 117 VPDW-------PKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CTTH-------HHHHHHHHHHEEEEEEEEEE
T ss_pred cCCH-------HHHHHHHHHHCCCCcEEEEE
Confidence 8754 48999999999999999987
No 51
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.54 E-value=1.1e-14 Score=151.83 Aligned_cols=122 Identities=20% Similarity=0.328 Sum_probs=99.2
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC----CCcEEEEeecCC
Q 006149 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR----SDMRWRVMDMTS 127 (659)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~----~~i~~~~~D~~~ 127 (659)
.....+...+.. ++.+|||+|||+|.++..|++.+. +|+|+|+|+.+++.++++....+ .+++++++|+.+
T Consensus 70 ~~~~~~~~~~~~----~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~ 144 (299)
T 3g2m_A 70 SEAREFATRTGP----VSGPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSA 144 (299)
T ss_dssp HHHHHHHHHHCC----CCSCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTB
T ss_pred HHHHHHHHhhCC----CCCcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhc
Confidence 344455566643 345999999999999999999976 89999999999999988876655 689999999999
Q ss_pred CCCCCCcccEEEec-ccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCchh
Q 006149 128 MQFMDETFDVILDK-GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHV 184 (659)
Q Consensus 128 l~~~~~sFDvVi~~-g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~~ 184 (659)
+++ +++||+|++. .+++++...+ ...+++++.++|||||++++.++..+..
T Consensus 145 ~~~-~~~fD~v~~~~~~~~~~~~~~-----~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 196 (299)
T 3g2m_A 145 FAL-DKRFGTVVISSGSINELDEAD-----RRGLYASVREHLEPGGKFLLSLAMSEAA 196 (299)
T ss_dssp CCC-SCCEEEEEECHHHHTTSCHHH-----HHHHHHHHHHHEEEEEEEEEEEECCHHH
T ss_pred CCc-CCCcCEEEECCcccccCCHHH-----HHHHHHHHHHHcCCCcEEEEEeecCccc
Confidence 987 6899998865 5566543222 6799999999999999999999876554
No 52
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.54 E-value=3.3e-14 Score=142.54 Aligned_cols=113 Identities=17% Similarity=0.300 Sum_probs=97.1
Q ss_pred HHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcc
Q 006149 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETF 135 (659)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sF 135 (659)
.+..++.. .++.+|||+|||+|.++..+++.+..+|+++|+|+.+++.++++.. ..++.++++|+.++++++++|
T Consensus 34 ~l~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~~~~~~~f 108 (243)
T 3bkw_A 34 ALRAMLPE---VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGP--DTGITYERADLDKLHLPQDSF 108 (243)
T ss_dssp HHHHHSCC---CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSC--SSSEEEEECCGGGCCCCTTCE
T ss_pred HHHHhccc---cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcc--cCCceEEEcChhhccCCCCCc
Confidence 46666654 4678999999999999999999876699999999999998866543 247999999999998888999
Q ss_pred cEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 136 DVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 136 DvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
|+|++..+++++.+. ..+++++.++|+|||++++.+..
T Consensus 109 D~v~~~~~l~~~~~~-------~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 109 DLAYSSLALHYVEDV-------ARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp EEEEEESCGGGCSCH-------HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred eEEEEeccccccchH-------HHHHHHHHHhcCcCcEEEEEeCC
Confidence 999999999998653 49999999999999999998864
No 53
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.53 E-value=2e-14 Score=146.84 Aligned_cols=117 Identities=17% Similarity=0.251 Sum_probs=98.5
Q ss_pred hhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCC
Q 006149 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ 129 (659)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~ 129 (659)
+..+...+.+.+.. .++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++ ...+++++++|+.+++
T Consensus 19 ~~~~~~~l~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~-----~~~~~~~~~~d~~~~~ 89 (261)
T 3ege_A 19 DIRIVNAIINLLNL---PKGSVIADIGAGTGGYSVALANQGL-FVYAVEPSIVMRQQAV-----VHPQVEWFTGYAENLA 89 (261)
T ss_dssp CHHHHHHHHHHHCC---CTTCEEEEETCTTSHHHHHHHTTTC-EEEEECSCHHHHHSSC-----CCTTEEEECCCTTSCC
T ss_pred cHHHHHHHHHHhCC---CCCCEEEEEcCcccHHHHHHHhCCC-EEEEEeCCHHHHHHHH-----hccCCEEEECchhhCC
Confidence 34566677777764 5678999999999999999998765 9999999998876442 2238999999999999
Q ss_pred CCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCch
Q 006149 130 FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (659)
Q Consensus 130 ~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~ 183 (659)
+++++||+|++..+++++.+. ..++++++++|| ||++++.++..+.
T Consensus 90 ~~~~~fD~v~~~~~l~~~~~~-------~~~l~~~~~~Lk-gG~~~~~~~~~~~ 135 (261)
T 3ege_A 90 LPDKSVDGVISILAIHHFSHL-------EKSFQEMQRIIR-DGTIVLLTFDIRL 135 (261)
T ss_dssp SCTTCBSEEEEESCGGGCSSH-------HHHHHHHHHHBC-SSCEEEEEECGGG
T ss_pred CCCCCEeEEEEcchHhhccCH-------HHHHHHHHHHhC-CcEEEEEEcCCch
Confidence 989999999999999998654 499999999999 9999998876443
No 54
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.52 E-value=3.9e-14 Score=145.39 Aligned_cols=107 Identities=24% Similarity=0.393 Sum_probs=95.2
Q ss_pred CCCCeEEEECCCcchHHHHHHHcC-CCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCCCCCcccEEEecccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQFMDETFDVILDKGGL 144 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g-~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~~~~sFDvVi~~g~l 144 (659)
.++.+|||+|||+|.++..+++.+ ..+|+++|+|+.+++.++++....+ +++.++++|+.++++++++||+|++..++
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 115 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVL 115 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechh
Confidence 578899999999999999999884 3599999999999999888765544 57999999999999989999999999999
Q ss_pred cccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+++.++. .+++++.++|||||++++.+..
T Consensus 116 ~~~~~~~-------~~l~~~~~~L~pgG~l~~~~~~ 144 (276)
T 3mgg_A 116 EHLQSPE-------EALKSLKKVLKPGGTITVIEGD 144 (276)
T ss_dssp GGCSCHH-------HHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhcCCHH-------HHHHHHHHHcCCCcEEEEEEcC
Confidence 9987654 8999999999999999998753
No 55
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.52 E-value=5.6e-14 Score=144.78 Aligned_cols=110 Identities=25% Similarity=0.475 Sum_probs=94.5
Q ss_pred HHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCccc
Q 006149 57 LISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFD 136 (659)
Q Consensus 57 l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFD 136 (659)
+.+.+.. .++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++. +++.++++|+.++++ +++||
T Consensus 49 l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~-~~~fD 119 (279)
T 3ccf_A 49 LLQLLNP---QPGEFILDLGCGTGQLTEKIAQSGA-EVLGTDNAATMIEKARQNY----PHLHFDVADARNFRV-DKPLD 119 (279)
T ss_dssp HHHHHCC---CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC----TTSCEEECCTTTCCC-SSCEE
T ss_pred HHHHhCC---CCCCEEEEecCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHhhC----CCCEEEECChhhCCc-CCCcC
Confidence 4555553 4678999999999999999998654 9999999999999876554 679999999999987 58999
Q ss_pred EEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCc
Q 006149 137 VILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (659)
Q Consensus 137 vVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~ 182 (659)
+|++..+++++.+.. .+++++.++|||||++++.+....
T Consensus 120 ~v~~~~~l~~~~d~~-------~~l~~~~~~LkpgG~l~~~~~~~~ 158 (279)
T 3ccf_A 120 AVFSNAMLHWVKEPE-------AAIASIHQALKSGGRFVAEFGGKG 158 (279)
T ss_dssp EEEEESCGGGCSCHH-------HHHHHHHHHEEEEEEEEEEEECTT
T ss_pred EEEEcchhhhCcCHH-------HHHHHHHHhcCCCcEEEEEecCCc
Confidence 999999999987644 899999999999999999887643
No 56
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.51 E-value=9.1e-14 Score=131.94 Aligned_cols=100 Identities=19% Similarity=0.307 Sum_probs=88.6
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEecccccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~ 146 (659)
.++.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++ .+++++.++| .++++++||+|++..++++
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~----~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~ 87 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEK----FDSVITLSDP---KEIPDNSVDFILFANSFHD 87 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHH----CTTSEEESSG---GGSCTTCEEEEEEESCSTT
T ss_pred CCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHh----CCCcEEEeCC---CCCCCCceEEEEEccchhc
Confidence 4678999999999999999999876 999999999999988666 5689999999 6777899999999999999
Q ss_pred cCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 147 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 147 l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
+.+. ..+++++.++|||||++++.++..
T Consensus 88 ~~~~-------~~~l~~~~~~L~pgG~l~~~~~~~ 115 (170)
T 3i9f_A 88 MDDK-------QHVISEVKRILKDDGRVIIIDWRK 115 (170)
T ss_dssp CSCH-------HHHHHHHHHHEEEEEEEEEEEECS
T ss_pred ccCH-------HHHHHHHHHhcCCCCEEEEEEcCc
Confidence 8654 499999999999999999998753
No 57
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.51 E-value=6.5e-14 Score=144.64 Aligned_cols=106 Identities=16% Similarity=0.276 Sum_probs=94.3
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCC-CCCCcccEEEecccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ-FMDETFDVILDKGGL 144 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~-~~~~sFDvVi~~g~l 144 (659)
++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++....+ ++++++++|+.+++ +++++||+|++.+++
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 146 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVL 146 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCG
T ss_pred CCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchh
Confidence 467999999999999999999976 99999999999999988776544 57999999999987 778999999999999
Q ss_pred cccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
+++.++. .+++++.++|||||++++.++..
T Consensus 147 ~~~~~~~-------~~l~~~~~~LkpgG~l~~~~~~~ 176 (285)
T 4htf_A 147 EWVADPR-------SVLQTLWSVLRPGGVLSLMFYNA 176 (285)
T ss_dssp GGCSCHH-------HHHHHHHHTEEEEEEEEEEEEBH
T ss_pred hcccCHH-------HHHHHHHHHcCCCeEEEEEEeCC
Confidence 9987654 89999999999999999998764
No 58
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.50 E-value=3.2e-14 Score=143.10 Aligned_cols=111 Identities=19% Similarity=0.098 Sum_probs=91.5
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCC--CCCCCcccEEEe-ccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM--QFMDETFDVILD-KGG 143 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l--~~~~~sFDvVi~-~g~ 143 (659)
.++.+|||+|||+|.++..+++.+..+|+++|+|+.+++.++++....+.++.++++|+.++ ++++++||+|++ ...
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~ 138 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCcc
Confidence 36789999999999999999887666899999999999999888766667899999999998 888899999998 444
Q ss_pred ccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 144 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 144 l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+ ...... ....+.++++++++|||||++++.++.
T Consensus 139 ~-~~~~~~--~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 139 L-SEETWH--THQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp C-BGGGTT--THHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred c-chhhhh--hhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 4 222211 123567899999999999999988754
No 59
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.50 E-value=3.9e-14 Score=148.58 Aligned_cols=112 Identities=17% Similarity=0.171 Sum_probs=89.3
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCC-------CcEEEEeec------CCC--CCCC
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRS-------DMRWRVMDM------TSM--QFMD 132 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~-------~i~~~~~D~------~~l--~~~~ 132 (659)
++.+|||||||+|..+..++..+..+|+|+|+|+.||+.|+++...... ++.|.+.|+ .++ ++++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 4689999999999877767666656999999999999999887654332 267888888 322 3567
Q ss_pred CcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCch
Q 006149 133 ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (659)
Q Consensus 133 ~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~ 183 (659)
++||+|++..+++++.+.++ ...+++++.++|||||+|++.++....
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~----~~~~l~~~~r~LkpGG~~i~~~~~~~~ 174 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRH----YATVMNNLSELTASGGKVLITTMDGDK 174 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTT----HHHHHHHHHHHEEEEEEEEEEEECHHH
T ss_pred CCeeEEEECchHHHhCCHHH----HHHHHHHHHHHcCCCCEEEEEeCCHHH
Confidence 89999999999987654331 469999999999999999999876443
No 60
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.50 E-value=9.5e-14 Score=141.67 Aligned_cols=113 Identities=21% Similarity=0.298 Sum_probs=92.6
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCC
Q 006149 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFM 131 (659)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~ 131 (659)
.+...+..++. ++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++.. . .++++|+.+++++
T Consensus 43 ~~~~~l~~~~~-----~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~---~--~~~~~d~~~~~~~ 111 (260)
T 2avn_A 43 LIGSFLEEYLK-----NPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGV---K--NVVEAKAEDLPFP 111 (260)
T ss_dssp HHHHHHHHHCC-----SCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTC---S--CEEECCTTSCCSC
T ss_pred HHHHHHHHhcC-----CCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcC---C--CEEECcHHHCCCC
Confidence 34445555542 568999999999999999998876 89999999999998876653 1 2899999999988
Q ss_pred CCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 132 DETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 132 ~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
+++||+|++.+++.++... ...+++++.++|||||++++.+...
T Consensus 112 ~~~fD~v~~~~~~~~~~~~------~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 112 SGAFEAVLALGDVLSYVEN------KDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp TTCEEEEEECSSHHHHCSC------HHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred CCCEEEEEEcchhhhcccc------HHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 8999999998877665322 3589999999999999999988763
No 61
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.49 E-value=1.3e-13 Score=144.75 Aligned_cols=107 Identities=22% Similarity=0.276 Sum_probs=95.1
Q ss_pred CCCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCcccEEEecc
Q 006149 66 SSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKG 142 (659)
Q Consensus 66 ~~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDvVi~~g 142 (659)
..++.+|||+|||+|.++..+++. +. +|+|+|+|+.+++.++++....+ .+++++++|+.++++++++||+|++..
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 193 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNE 193 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEES
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECC
Confidence 357889999999999999999988 65 89999999999999988776554 479999999999999899999999999
Q ss_pred cccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 143 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 143 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
+++++ + ...+++++.++|||||++++.+...
T Consensus 194 ~l~~~-~-------~~~~l~~~~~~LkpgG~l~~~~~~~ 224 (312)
T 3vc1_A 194 STMYV-D-------LHDLFSEHSRFLKVGGRYVTITGCW 224 (312)
T ss_dssp CGGGS-C-------HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred chhhC-C-------HHHHHHHHHHHcCCCcEEEEEEccc
Confidence 99998 3 3499999999999999999988653
No 62
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.49 E-value=7e-14 Score=144.90 Aligned_cols=157 Identities=15% Similarity=0.127 Sum_probs=103.3
Q ss_pred hhhhcccCCCCHhhHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEE
Q 006149 17 DLLQTLGDFTSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITN 96 (659)
Q Consensus 17 ~lp~~~~~f~~~eyWd~~y~~~~~~~~fewy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~Vtg 96 (659)
.+-.....|....||+.+|.... .....-..........+.+++.. ...++.+|||||||+|..+..++..+..+|+|
T Consensus 22 ~~~~~y~~~~~~~y~~~~y~~~~-~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~g 99 (289)
T 2g72_A 22 AVASAYQRFEPRAYLRNNYAPPR-GDLCNPNGVGPWKLRCLAQTFAT-GEVSGRTLIDIGSGPTVYQLLSACSHFEDITM 99 (289)
T ss_dssp HHHHHGGGCCHHHHHHHHHSTTT-TCCSSTTSHHHHHHHHHHHHHHT-SCSCCSEEEEETCTTCCGGGTTGGGGCSEEEE
T ss_pred HHHHHHhccCHHHHHHHHhcCcc-cchhhhhHHHHHHHHHHHHHhCC-CCCCCCeEEEECCCcChHHHHhhccCCCeEEE
Confidence 35445555776788888886541 11100000111122334455432 11256899999999999665554443459999
Q ss_pred EcCCHHHHHHHHHHhhcCCC-------------------------------CcEEEEeecCC-CCC-----CCCcccEEE
Q 006149 97 VDFSKVVISDMLRRNVRDRS-------------------------------DMRWRVMDMTS-MQF-----MDETFDVIL 139 (659)
Q Consensus 97 vD~S~~~i~~~~~~~~~~~~-------------------------------~i~~~~~D~~~-l~~-----~~~sFDvVi 139 (659)
+|+|+.|++.++++...... .+.++++|+.+ +|+ ++++||+|+
T Consensus 100 vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~ 179 (289)
T 2g72_A 100 TDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALV 179 (289)
T ss_dssp ECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEE
T ss_pred eCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEE
Confidence 99999999988775432110 14577789988 553 456799999
Q ss_pred ecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEE
Q 006149 140 DKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (659)
Q Consensus 140 ~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~ 178 (659)
+..+++++.... .....+++++.++|||||+|++..
T Consensus 180 ~~~~l~~~~~~~---~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 180 SAFCLEAVSPDL---ASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp EESCHHHHCSSH---HHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ehhhhhhhcCCH---HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999999965431 125699999999999999999975
No 63
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.49 E-value=1.8e-13 Score=141.58 Aligned_cols=106 Identities=21% Similarity=0.296 Sum_probs=94.0
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-C-CCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEecccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGL 144 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~-g-~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l 144 (659)
.++.+|||+|||+|.++..+++. + ..+|+|+|+|+.+++.++++......+++++++|+.+++++ ++||+|++..++
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~l 99 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELN-DKYDIAICHAFL 99 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCS-SCEEEEEEESCG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcC-CCeeEEEECChh
Confidence 46789999999999999999987 2 25999999999999999888766666899999999998874 799999999999
Q ss_pred cccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+++.+.. .++++++++|||||++++.+..
T Consensus 100 ~~~~~~~-------~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 100 LHMTTPE-------TMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp GGCSSHH-------HHHHHHHHTEEEEEEEEEEECC
T ss_pred hcCCCHH-------HHHHHHHHHcCCCCEEEEEecc
Confidence 9987644 9999999999999999998865
No 64
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.48 E-value=4.7e-13 Score=128.94 Aligned_cols=113 Identities=10% Similarity=0.108 Sum_probs=85.0
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCC-CCCCcccEEEec-cc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ-FMDETFDVILDK-GG 143 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~-~~~~sFDvVi~~-g~ 143 (659)
.++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.++++....+ .++++++.|+..++ +.+++||+|++. +.
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~~-~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~ 99 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGLS-KKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGY 99 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC-
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCC
Confidence 467899999999999999999885 499999999999999988775544 68999998887753 457899999876 33
Q ss_pred ccccCC-cccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 144 LDALME-PELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 144 l~~l~~-~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+..... ..........+++++.++|||||++++..+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 100 LPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp ----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 222000 0001122568899999999999999998875
No 65
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.48 E-value=9.7e-14 Score=143.46 Aligned_cols=114 Identities=20% Similarity=0.253 Sum_probs=95.4
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCC-CCCcccEEEeccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQF-MDETFDVILDKGG 143 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~-~~~sFDvVi~~g~ 143 (659)
.++.+|||+|||+|.++..++..+..+|+|+|+|+.+++.++++....+ .++.++++|+.++++ ++++||+|++.++
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 142 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFS 142 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESC
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECch
Confidence 3678999999999999999988877799999999999999988765443 368999999999888 6789999999999
Q ss_pred ccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCch
Q 006149 144 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (659)
Q Consensus 144 l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~ 183 (659)
+++..... .....+++++.++|+|||++++.+.....
T Consensus 143 l~~~~~~~---~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 179 (298)
T 1ri5_A 143 FHYAFSTS---ESLDIAQRNIARHLRPGGYFIMTVPSRDV 179 (298)
T ss_dssp GGGGGSSH---HHHHHHHHHHHHTEEEEEEEEEEEECHHH
T ss_pred hhhhcCCH---HHHHHHHHHHHHhcCCCCEEEEEECCHHH
Confidence 98742111 12679999999999999999999876443
No 66
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.48 E-value=2.8e-13 Score=135.78 Aligned_cols=120 Identities=23% Similarity=0.316 Sum_probs=99.4
Q ss_pred hhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCC
Q 006149 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ 129 (659)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~ 129 (659)
+......+...+. ++.+|||+|||+|.++..+++. .+|+++|+|+.+++.++++......+++++++|+.+++
T Consensus 20 ~~~~~~~~~~~~~-----~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~ 92 (243)
T 3d2l_A 20 YPEWVAWVLEQVE-----PGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELE 92 (243)
T ss_dssp HHHHHHHHHHHSC-----TTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCC
T ss_pred HHHHHHHHHHHcC-----CCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcC
Confidence 3445555666664 4689999999999999999887 59999999999999998877666678999999999988
Q ss_pred CCCCcccEEEecc-cccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 130 FMDETFDVILDKG-GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 130 ~~~~sFDvVi~~g-~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
++ ++||+|++.. +++++.+.+ ....+++++.++|+|||++++.....
T Consensus 93 ~~-~~fD~v~~~~~~~~~~~~~~----~~~~~l~~~~~~L~pgG~l~~~~~~~ 140 (243)
T 3d2l_A 93 LP-EPVDAITILCDSLNYLQTEA----DVKQTFDSAARLLTDGGKLLFDVHSP 140 (243)
T ss_dssp CS-SCEEEEEECTTGGGGCCSHH----HHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CC-CCcCEEEEeCCchhhcCCHH----HHHHHHHHHHHhcCCCeEEEEEcCCH
Confidence 76 8999999986 888875433 26789999999999999999876653
No 67
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.48 E-value=2.1e-13 Score=136.33 Aligned_cols=134 Identities=19% Similarity=0.256 Sum_probs=102.7
Q ss_pred HhhHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHH
Q 006149 28 KENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDM 107 (659)
Q Consensus 28 ~eyWd~~y~~~~~~~~fewy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~ 107 (659)
.++|+..+.... ..|......+...+..++ .++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.+
T Consensus 9 a~~yd~~~~~~~----~~~~~~~~~~~~~l~~~~-----~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a 78 (239)
T 3bxo_A 9 ADVYDLFYLGRG----KDYAAEASDIADLVRSRT-----PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHA 78 (239)
T ss_dssp HHHHHHHHHHHT----CCHHHHHHHHHHHHHHHC-----TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHH
T ss_pred HHHHHHHhhccH----hhHHHHHHHHHHHHHHhc-----CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHH
Confidence 568888776531 112222223334444444 2578999999999999999998876 999999999999988
Q ss_pred HHHhhcCCCCcEEEEeecCCCCCCCCcccEEEe-cccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 108 LRRNVRDRSDMRWRVMDMTSMQFMDETFDVILD-KGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 108 ~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~-~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+++. +++.++++|+.++++ +++||+|++ .++++++.+++ ....+++++.++|+|||++++.++.
T Consensus 79 ~~~~----~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~~~----~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (239)
T 3bxo_A 79 RKRL----PDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKTTE----ELGAAVASFAEHLEPGGVVVVEPWW 143 (239)
T ss_dssp HHHC----TTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCSHH----HHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred HHhC----CCCEEEECCHHHccc-CCCCcEEEEcCchHhhcCCHH----HHHHHHHHHHHhcCCCeEEEEEecc
Confidence 6653 569999999999887 689999995 55888886533 2679999999999999999998654
No 68
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.47 E-value=2.5e-13 Score=137.59 Aligned_cols=102 Identities=19% Similarity=0.240 Sum_probs=90.0
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEeccccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLD 145 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~ 145 (659)
.++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.++++ .+++.++++|+.+++ ++++||+|++..+++
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~----~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~ 106 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR----LPNTNFGKADLATWK-PAQKADLLYANAVFQ 106 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH----STTSEEEECCTTTCC-CSSCEEEEEEESCGG
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh----CCCcEEEECChhhcC-ccCCcCEEEEeCchh
Confidence 56789999999999999999887 234899999999999987665 468999999999988 788999999999999
Q ss_pred ccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 146 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 146 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
++.+. ..+++++.++|+|||++++.+..
T Consensus 107 ~~~~~-------~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 107 WVPDH-------LAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp GSTTH-------HHHHHHHGGGEEEEEEEEEEEEC
T ss_pred hCCCH-------HHHHHHHHHhcCCCeEEEEEeCC
Confidence 98654 48999999999999999998864
No 69
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.46 E-value=4.8e-13 Score=139.52 Aligned_cols=113 Identities=15% Similarity=0.205 Sum_probs=95.9
Q ss_pred CCCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCcccEEEecc
Q 006149 66 SSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKG 142 (659)
Q Consensus 66 ~~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDvVi~~g 142 (659)
..++.+|||+|||+|.++..+++. | .+|+|+|+|+.+++.++++....+ .+++++++|+.++ +++||+|++.+
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~ 145 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLG 145 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSEEEEES
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccEEEEcc
Confidence 367889999999999999999988 7 599999999999999988776544 3799999999886 68999999999
Q ss_pred cccccCCccc--chHHHHHHHHHHHhccccCeEEEEEEcCCc
Q 006149 143 GLDALMEPEL--GHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (659)
Q Consensus 143 ~l~~l~~~~~--~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~ 182 (659)
+++++.+++. +......+++++.++|||||++++.++..+
T Consensus 146 ~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 146 AFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp CGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred hHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 9999976521 112367999999999999999999887644
No 70
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.46 E-value=6.1e-13 Score=137.34 Aligned_cols=107 Identities=17% Similarity=0.244 Sum_probs=92.2
Q ss_pred CCCCCeEEEECCCcchHHHHHHH-cCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCcccEEEecc
Q 006149 66 SSPPPQILVPGCGNSRLSEHLYD-AGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKG 142 (659)
Q Consensus 66 ~~~~~~ILDiGCG~G~~s~~La~-~g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDvVi~~g 142 (659)
..++.+|||+|||+|.++..+++ .|. +|+|+|+|+.+++.++++....+ +++.++++|+.+++ ++||+|++.+
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~ 137 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIG 137 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEES
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeC
Confidence 36788999999999999999985 466 99999999999999988775543 57999999998765 7899999999
Q ss_pred cccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 143 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 143 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
+++++...+ ...+++++.++|||||++++.++..
T Consensus 138 ~l~~~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 138 AFEHFGHER-----YDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp CGGGTCTTT-----HHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred chhhcChHH-----HHHHHHHHHHhcCCCCEEEEEEecC
Confidence 999986433 5699999999999999999988754
No 71
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.46 E-value=1.5e-12 Score=126.64 Aligned_cols=156 Identities=12% Similarity=0.113 Sum_probs=109.6
Q ss_pred CCCCeEEEECCCcchHHHHHHHc--CCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCC-CCCCcccEEEec
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ-FMDETFDVILDK 141 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~--g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~-~~~~sFDvVi~~ 141 (659)
.++.+|||+|||+|.++..+++. +..+|+++|+++.+++.++++....+ ++++++++|+.+++ +.+++||+|++.
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 100 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFN 100 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEc
Confidence 36789999999999999999887 34599999999999999988766543 57999999998875 566899999987
Q ss_pred ccccccCCc--ccchHHHHHHHHHHHhccccCeEEEEEEcCCch-------hhcchhhhh-ccCceEEEeeeCCCCCCCC
Q 006149 142 GGLDALMEP--ELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH-------VLGLLFPKF-RFGWKMSVHAIPQKSSSEP 211 (659)
Q Consensus 142 g~l~~l~~~--~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~-------~~~~l~~~~-~~~w~~~~~~i~~~~~~~~ 211 (659)
..+....+. .........+++++.++|||||++++..+.... ....+.... ...|.+....+.. ..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~----~~ 176 (197)
T 3eey_A 101 LGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFIN----QA 176 (197)
T ss_dssp ESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETT----CC
T ss_pred CCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEecc----Cc
Confidence 655110000 001112457999999999999999998864211 111222222 2367776555543 23
Q ss_pred CCccEEEEEEecCCc
Q 006149 212 SLQTFMVVADKENSS 226 (659)
Q Consensus 212 ~l~~f~~v~~k~~~~ 226 (659)
..++|.++.+|....
T Consensus 177 ~~pp~~~~~~~~~~~ 191 (197)
T 3eey_A 177 NCPPILVCIEKISEG 191 (197)
T ss_dssp SCCCEEEEEEECCSS
T ss_pred cCCCeEEEEEEcccc
Confidence 457788888876543
No 72
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.46 E-value=1.3e-12 Score=128.16 Aligned_cols=119 Identities=13% Similarity=-0.023 Sum_probs=96.5
Q ss_pred hhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcC-CCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCC
Q 006149 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTS 127 (659)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g-~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~ 127 (659)
..++...+...+.. .++.+|||+|||+|.++..+++.+ ..+|+++|+|+.+++.++++....+ ++++++++|+.+
T Consensus 25 ~~~i~~~~l~~l~~---~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~ 101 (204)
T 3e05_A 25 KQEVRAVTLSKLRL---QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPE 101 (204)
T ss_dssp CHHHHHHHHHHTTC---CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTT
T ss_pred hHHHHHHHHHHcCC---CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhh
Confidence 34555666666654 578899999999999999999885 3699999999999999887765433 679999999977
Q ss_pred CCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 128 MQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 128 l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
.....++||+|++.++++. ...+++++.++|+|||++++.....
T Consensus 102 ~~~~~~~~D~i~~~~~~~~----------~~~~l~~~~~~LkpgG~l~~~~~~~ 145 (204)
T 3e05_A 102 GLDDLPDPDRVFIGGSGGM----------LEEIIDAVDRRLKSEGVIVLNAVTL 145 (204)
T ss_dssp TCTTSCCCSEEEESCCTTC----------HHHHHHHHHHHCCTTCEEEEEECBH
T ss_pred hhhcCCCCCEEEECCCCcC----------HHHHHHHHHHhcCCCeEEEEEeccc
Confidence 5434478999998877651 4589999999999999999988763
No 73
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.45 E-value=2.2e-13 Score=139.71 Aligned_cols=111 Identities=19% Similarity=0.258 Sum_probs=87.7
Q ss_pred HHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCC---
Q 006149 54 RDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQF--- 130 (659)
Q Consensus 54 ~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~--- 130 (659)
...+...+.. .++.+|||+|||+|.++..|++.+. +|+++|+|+.|++.++++.... ++++++.+++.
T Consensus 34 ~~~il~~l~l---~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~-----~v~~~~~~~~~~~~ 104 (261)
T 3iv6_A 34 RENDIFLENI---VPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADR-----CVTIDLLDITAEIP 104 (261)
T ss_dssp HHHHHHTTTC---CTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSS-----CCEEEECCTTSCCC
T ss_pred HHHHHHhcCC---CCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhc-----cceeeeeecccccc
Confidence 3445555554 5788999999999999999999986 9999999999999887776433 34455544433
Q ss_pred --CCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 131 --MDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 131 --~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
.+++||+|++..+++++...+ ...++.++.++| |||++++...
T Consensus 105 ~~~~~~fD~Vv~~~~l~~~~~~~-----~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 105 KELAGHFDFVLNDRLINRFTTEE-----ARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp GGGTTCCSEEEEESCGGGSCHHH-----HHHHHHHHHHHH-TTSEEEEEEE
T ss_pred cccCCCccEEEEhhhhHhCCHHH-----HHHHHHHHHHhC-cCcEEEEEec
Confidence 257899999999999875443 668999999999 9999998764
No 74
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.45 E-value=3.2e-12 Score=127.42 Aligned_cols=137 Identities=16% Similarity=0.155 Sum_probs=100.4
Q ss_pred CCCCeEEEECCC-cchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCC-CCCCCcccEEEecccc
Q 006149 67 SPPPQILVPGCG-NSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM-QFMDETFDVILDKGGL 144 (659)
Q Consensus 67 ~~~~~ILDiGCG-~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l-~~~~~sFDvVi~~g~l 144 (659)
.++.+|||+||| +|.++..++.....+|+|+|+++.+++.++++....+.+++++++|+..+ ++++++||+|+++..+
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~ 133 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPY 133 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCC
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCC
Confidence 468899999999 99999999988334999999999999999887766556899999997654 4567899999988666
Q ss_pred cccCCcc------------cchHHHHHHHHHHHhccccCeEEEEEEcCCchhhcchhhhh-ccCceEEEeee
Q 006149 145 DALMEPE------------LGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKF-RFGWKMSVHAI 203 (659)
Q Consensus 145 ~~l~~~~------------~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~~~~~l~~~~-~~~w~~~~~~i 203 (659)
....... .+......+++++.++|||||++++...........+...+ ..+|.+....+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 205 (230)
T 3evz_A 134 YDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKDIKF 205 (230)
T ss_dssp C---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEEEEe
Confidence 5433211 11122478999999999999999998765443334444444 34776665554
No 75
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.44 E-value=9.2e-14 Score=140.31 Aligned_cols=114 Identities=18% Similarity=0.082 Sum_probs=91.4
Q ss_pred HHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCC--CCC
Q 006149 54 RDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM--QFM 131 (659)
Q Consensus 54 ~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l--~~~ 131 (659)
...+.+.+. .++.+|||||||+|..+..+++.+..+||+||+|+.+++.++++......++.++.+|+.+. +++
T Consensus 50 m~~~a~~~~----~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~ 125 (236)
T 3orh_A 50 MHALAAAAS----SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLP 125 (236)
T ss_dssp HHHHHHHHT----TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSC
T ss_pred HHHHHHhhc----cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhccccc
Confidence 344555554 37889999999999999999887556899999999999999888877778899999998764 577
Q ss_pred CCcccEEEecc-----cccccCCcccchHHHHHHHHHHHhccccCeEEEEEE
Q 006149 132 DETFDVILDKG-----GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (659)
Q Consensus 132 ~~sFDvVi~~g-----~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~ 178 (659)
+++||.|+... .+.++. ....+++++.|+|||||+|++..
T Consensus 126 ~~~FD~i~~D~~~~~~~~~~~~-------~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 126 DGHFDGILYDTYPLSEETWHTH-------QFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp TTCEEEEEECCCCCBGGGTTTH-------HHHHHHHTHHHHEEEEEEEEECC
T ss_pred ccCCceEEEeeeecccchhhhc-------chhhhhhhhhheeCCCCEEEEEe
Confidence 89999997432 222322 25689999999999999998764
No 76
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.44 E-value=8.8e-13 Score=138.43 Aligned_cols=108 Identities=10% Similarity=0.144 Sum_probs=93.6
Q ss_pred CCCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCcccEEEecc
Q 006149 66 SSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKG 142 (659)
Q Consensus 66 ~~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDvVi~~g 142 (659)
..++.+|||+|||+|.++..+++. |. +|+++|+|+.+++.++++....+ +++.++++|+.+++ ++||+|++.+
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~ 163 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIE 163 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEES
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeC
Confidence 367889999999999999999987 76 99999999999999988776544 46999999998874 7899999999
Q ss_pred cccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCc
Q 006149 143 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (659)
Q Consensus 143 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~ 182 (659)
+++++...+ ...+++++.++|||||++++.++..+
T Consensus 164 ~l~~~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~~~ 198 (318)
T 2fk8_A 164 AFEHFGHEN-----YDDFFKRCFNIMPADGRMTVQSSVSY 198 (318)
T ss_dssp CGGGTCGGG-----HHHHHHHHHHHSCTTCEEEEEEEECC
T ss_pred hHHhcCHHH-----HHHHHHHHHHhcCCCcEEEEEEeccC
Confidence 999985433 56999999999999999999887643
No 77
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.44 E-value=1.7e-12 Score=134.75 Aligned_cols=148 Identities=14% Similarity=0.086 Sum_probs=103.8
Q ss_pred ccccccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHH-HHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEE
Q 006149 43 SFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLS-EHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRW 120 (659)
Q Consensus 43 ~fewy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s-~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~ 120 (659)
.|.+|..|..+...-..++.. .++.+|||||||+|.++ ..+++....+|+|+|+++.+++.++++....+ .++++
T Consensus 100 ~fpy~~~~~~l~~~E~~la~l---~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~ 176 (298)
T 3fpf_A 100 SFYFYPRYLELLKNEAALGRF---RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNV 176 (298)
T ss_dssp TSTTHHHHHHHHHHHHHHTTC---CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEE
T ss_pred cCCCcccHHHHHHHHHHHcCC---CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEE
Confidence 344555555554443444443 68899999999999876 44555433599999999999999988765433 68999
Q ss_pred EEeecCCCCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCc-hhhc-chhhhhccCceE
Q 006149 121 RVMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES-HVLG-LLFPKFRFGWKM 198 (659)
Q Consensus 121 ~~~D~~~l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~-~~~~-~l~~~~~~~w~~ 198 (659)
+++|+.+++ +++||+|+..+. ..+ ..++++++.++|||||++++...... .... ........+|..
T Consensus 177 v~gDa~~l~--d~~FDvV~~~a~---~~d-------~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~~~~~gf~~ 244 (298)
T 3fpf_A 177 ITGDETVID--GLEFDVLMVAAL---AEP-------KRRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSDDDITGFRR 244 (298)
T ss_dssp EESCGGGGG--GCCCSEEEECTT---CSC-------HHHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCTGGGTTEEE
T ss_pred EECchhhCC--CCCcCEEEECCC---ccC-------HHHHHHHHHHHcCCCcEEEEEcCcchhhhccccCChhhhhhhhh
Confidence 999999875 789999997554 222 45999999999999999999885321 1111 111233457877
Q ss_pred EEeeeCC
Q 006149 199 SVHAIPQ 205 (659)
Q Consensus 199 ~~~~i~~ 205 (659)
.....+.
T Consensus 245 ~~~~~p~ 251 (298)
T 3fpf_A 245 AGVVLPS 251 (298)
T ss_dssp EEEECCC
T ss_pred eeEECCC
Confidence 7666554
No 78
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.44 E-value=3.3e-13 Score=134.76 Aligned_cols=136 Identities=11% Similarity=0.045 Sum_probs=102.3
Q ss_pred CCCHhhHHHHHh--hcCCCCcccc--ccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCC
Q 006149 25 FTSKENWDKFFT--IRGIGDSFEW--YAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFS 100 (659)
Q Consensus 25 f~~~eyWd~~y~--~~~~~~~few--y~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S 100 (659)
|....+|+..|. .. ..++.. ....+.+...+.+.+.. .++.+|||+|||+|.++..++..+ .+|+++|++
T Consensus 28 f~~~~~~~~~Y~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~ 101 (231)
T 1vbf_A 28 FLPENLKDYAYAHTHE--ALPILPGINTTALNLGIFMLDELDL---HKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEIN 101 (231)
T ss_dssp HSCGGGGGGSSSSTTC--CEEEETTEEECCHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESC
T ss_pred cCCcchhhhccccCCC--ceeeCCCCccCCHHHHHHHHHhcCC---CCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCC
Confidence 445567776666 33 111111 11234555566666654 577899999999999999999987 599999999
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 101 KVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 101 ~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+.+++.++++....+ ++.++++|+.+....+++||+|++..+++++. .++.++|+|||++++....
T Consensus 102 ~~~~~~a~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~-------------~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 102 EKMYNYASKLLSYYN-NIKLILGDGTLGYEEEKPYDRVVVWATAPTLL-------------CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp HHHHHHHHHHHTTCS-SEEEEESCGGGCCGGGCCEEEEEESSBBSSCC-------------HHHHHTEEEEEEEEEEECS
T ss_pred HHHHHHHHHHHhhcC-CeEEEECCcccccccCCCccEEEECCcHHHHH-------------HHHHHHcCCCcEEEEEEcC
Confidence 999999887765444 89999999988433467899999999998763 3688999999999999764
No 79
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.43 E-value=5.1e-13 Score=132.60 Aligned_cols=96 Identities=21% Similarity=0.224 Sum_probs=84.8
Q ss_pred CCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEecccccccC
Q 006149 69 PPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDALM 148 (659)
Q Consensus 69 ~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~l~ 148 (659)
+.+|||+|||+|.++..++.. +++|+|+.+++.++++ ++.++++|+.++++++++||+|++..+++++.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 116 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR------GVFVLKGTAENLPLKDESFDFALMVTTICFVD 116 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT------TCEEEECBTTBCCSCTTCEEEEEEESCGGGSS
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc------CCEEEEcccccCCCCCCCeeEEEEcchHhhcc
Confidence 689999999999999988654 9999999999877554 68999999999998888999999999999986
Q ss_pred CcccchHHHHHHHHHHHhccccCeEEEEEEcCCc
Q 006149 149 EPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (659)
Q Consensus 149 ~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~ 182 (659)
+. ..+++++.++|+|||++++.+....
T Consensus 117 ~~-------~~~l~~~~~~L~pgG~l~i~~~~~~ 143 (219)
T 1vlm_A 117 DP-------ERALKEAYRILKKGGYLIVGIVDRE 143 (219)
T ss_dssp CH-------HHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred CH-------HHHHHHHHHHcCCCcEEEEEEeCCc
Confidence 54 4899999999999999999887643
No 80
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.43 E-value=3.5e-13 Score=132.52 Aligned_cols=139 Identities=16% Similarity=0.086 Sum_probs=104.2
Q ss_pred CCCHhhHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHH
Q 006149 25 FTSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVI 104 (659)
Q Consensus 25 f~~~eyWd~~y~~~~~~~~fewy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i 104 (659)
|....+|...|...........+...+.....+.+.+.. .++.+|||+|||+|.++..+++.+ .+|+++|+++.++
T Consensus 37 f~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~vLdiG~G~G~~~~~la~~~-~~v~~vD~~~~~~ 112 (210)
T 3lbf_A 37 FVDEAFEQKAWDNIALPIGQGQTISQPYMVARMTELLEL---TPQSRVLEIGTGSGYQTAILAHLV-QHVCSVERIKGLQ 112 (210)
T ss_dssp GSCGGGGGGTTSSSCEECTTSCEECCHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHH
T ss_pred cCCcchhhhccCCCccccCCCCEeCCHHHHHHHHHhcCC---CCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEecCHHHH
Confidence 445556665555431001111122244555666677654 678899999999999999999986 4999999999999
Q ss_pred HHHHHHhhcCC-CCcEEEEeecCCCCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 105 SDMLRRNVRDR-SDMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 105 ~~~~~~~~~~~-~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+.++++....+ .+++++++|+.+...++++||+|++.++++++.+ ++.++|+|||++++....
T Consensus 113 ~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~-------------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 113 WQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPT-------------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp HHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSBCSSCCT-------------HHHHTEEEEEEEEEEECS
T ss_pred HHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccchhhhhH-------------HHHHhcccCcEEEEEEcC
Confidence 99987765543 5799999999987666789999999999888642 578999999999998765
No 81
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.43 E-value=2.8e-13 Score=133.82 Aligned_cols=101 Identities=23% Similarity=0.320 Sum_probs=85.5
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCC---CCCC-CcccEEEecc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM---QFMD-ETFDVILDKG 142 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l---~~~~-~sFDvVi~~g 142 (659)
.++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++ .++.+.++|+.++ ++.. ++||+|++..
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~ 124 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAA-----GAGEVHLASYAQLAEAKVPVGKDYDLICANF 124 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHT-----CSSCEEECCHHHHHTTCSCCCCCEEEEEEES
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHh-----cccccchhhHHhhcccccccCCCccEEEECc
Confidence 3568999999999999999999876 999999999999877554 5678899988877 4444 4599999999
Q ss_pred cccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 143 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 143 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
+++ ..+. ..+++++.++|||||++++.++..
T Consensus 125 ~l~-~~~~-------~~~l~~~~~~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 125 ALL-HQDI-------IELLSAMRTLLVPGGALVIQTLHP 155 (227)
T ss_dssp CCC-SSCC-------HHHHHHHHHTEEEEEEEEEEECCT
T ss_pred hhh-hhhH-------HHHHHHHHHHhCCCeEEEEEecCc
Confidence 999 4443 489999999999999999998764
No 82
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.43 E-value=2.7e-12 Score=126.58 Aligned_cols=117 Identities=13% Similarity=0.065 Sum_probs=93.7
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC-C-CcEEEEeecCCC
Q 006149 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-S-DMRWRVMDMTSM 128 (659)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~-~-~i~~~~~D~~~l 128 (659)
..+...+...+.. .++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.++++....+ + ++.++++|+.+.
T Consensus 41 ~~~~~~~l~~l~~---~~~~~vLDlGcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 116 (204)
T 3njr_A 41 SPMRALTLAALAP---RRGELLWDIGGGSGSVSVEWCLAG-GRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA 116 (204)
T ss_dssp HHHHHHHHHHHCC---CTTCEEEEETCTTCHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG
T ss_pred HHHHHHHHHhcCC---CCCCEEEEecCCCCHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh
Confidence 3555566667664 577899999999999999999985 499999999999999887765544 4 799999999884
Q ss_pred CCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCch
Q 006149 129 QFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (659)
Q Consensus 129 ~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~ 183 (659)
.....+||+|++.+.+ . .. +++++.++|||||++++.......
T Consensus 117 ~~~~~~~D~v~~~~~~------~-----~~-~l~~~~~~LkpgG~lv~~~~~~~~ 159 (204)
T 3njr_A 117 LADLPLPEAVFIGGGG------S-----QA-LYDRLWEWLAPGTRIVANAVTLES 159 (204)
T ss_dssp GTTSCCCSEEEECSCC------C-----HH-HHHHHHHHSCTTCEEEEEECSHHH
T ss_pred cccCCCCCEEEECCcc------c-----HH-HHHHHHHhcCCCcEEEEEecCccc
Confidence 3334689999987644 1 34 899999999999999999876443
No 83
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.43 E-value=2.6e-13 Score=141.07 Aligned_cols=108 Identities=15% Similarity=0.093 Sum_probs=82.6
Q ss_pred CCCCeEEEECCCcchHHHHH----HHc-CCCeE--EEEcCCHHHHHHHHHHhhcC--CCCcEE--EEeecCCCC------
Q 006149 67 SPPPQILVPGCGNSRLSEHL----YDA-GFHGI--TNVDFSKVVISDMLRRNVRD--RSDMRW--RVMDMTSMQ------ 129 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~L----a~~-g~~~V--tgvD~S~~~i~~~~~~~~~~--~~~i~~--~~~D~~~l~------ 129 (659)
.++.+|||||||+|.++..+ +.. +...| +++|+|+.|++.++++.... .+++.+ .++++.+++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 45679999999999876533 332 22333 99999999999988876542 245544 455555443
Q ss_pred CCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 130 FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 130 ~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
+++++||+|++..+++++.++. ++|++++++|||||++++.....
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~~-------~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDIP-------ATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCHH-------HHHHHHHHTEEEEEEEEEEEECT
T ss_pred cCCCceeEEEEeeeeeecCCHH-------HHHHHHHHHcCCCcEEEEEEecC
Confidence 5678999999999999998755 89999999999999999987654
No 84
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.42 E-value=1.1e-12 Score=130.29 Aligned_cols=114 Identities=17% Similarity=0.157 Sum_probs=85.5
Q ss_pred HHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCC---
Q 006149 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM--- 128 (659)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l--- 128 (659)
+...+...+. ....++.+|||+|||+|..+..+++. +..+|+|+|+|+.+++.|.+.+.. ..++.++++|+...
T Consensus 43 l~~~~~~~l~-~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~-~~~v~~~~~d~~~~~~~ 120 (210)
T 1nt2_A 43 LAAMILKGHR-LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE-RNNIIPLLFDASKPWKY 120 (210)
T ss_dssp HHHHHHTSCC-CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH-CSSEEEECSCTTCGGGT
T ss_pred HHHHHHhhcc-cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc-CCCeEEEEcCCCCchhh
Confidence 3334444433 23357889999999999999999886 335899999999998877765543 46789999999874
Q ss_pred -CCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEE
Q 006149 129 -QFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (659)
Q Consensus 129 -~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~ 178 (659)
++. ++||+|++.. ..+. ....++.+++++|||||++++..
T Consensus 121 ~~~~-~~fD~V~~~~-----~~~~----~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 121 SGIV-EKVDLIYQDI-----AQKN----QIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp TTTC-CCEEEEEECC-----CSTT----HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccc-cceeEEEEec-----cChh----HHHHHHHHHHHHhCCCCEEEEEE
Confidence 444 7999999862 1111 13456999999999999999985
No 85
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.42 E-value=4.7e-13 Score=129.76 Aligned_cols=108 Identities=12% Similarity=0.027 Sum_probs=90.0
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCC--CCCCcccEEEecccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ--FMDETFDVILDKGGL 144 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~--~~~~sFDvVi~~g~l 144 (659)
++.+|||+|||+|.++..++..+..+|+++|+|+.+++.++++....+ .+++++++|+.+++ +++++||+|++...+
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~ 123 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPY 123 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCT
T ss_pred CCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCC
Confidence 678999999999999998888887789999999999999887765444 58999999998863 447899999998776
Q ss_pred cccCCcccchHHHHHHHHHHHh--ccccCeEEEEEEcCC
Q 006149 145 DALMEPELGHKLGNQYLSEVKR--LLKSGGKFVCLTLAE 181 (659)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~ei~r--vLkpGG~lvi~~~~~ 181 (659)
++.. . ....++..+.+ +|+|||++++.....
T Consensus 124 ~~~~-~-----~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 124 NVDS-A-----DVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp TSCH-H-----HHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred Ccch-h-----hHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 6531 1 25689999999 999999999987653
No 86
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.41 E-value=1.4e-12 Score=134.84 Aligned_cols=116 Identities=15% Similarity=0.204 Sum_probs=88.8
Q ss_pred chHHHHHHHHHHhhhhhhhhhccccCCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc-----CCCC
Q 006149 515 ASSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF-----GFTQ 589 (659)
Q Consensus 515 ~~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F-----gl~~ 589 (659)
.+.||++|++ ++++. ++++.+||+||+|+|.+++.+.++.|..+|++|||||.|+++|+++| ++ .
T Consensus 58 e~~y~e~l~~-~~l~~--------~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~-~ 127 (275)
T 1iy9_A 58 EFVYHEMVAH-VPLFT--------HPNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKL-D 127 (275)
T ss_dssp HHHHHHHHHH-HHHHH--------SSSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTT-T
T ss_pred hhHHHHHHHH-HHHhh--------CCCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhcccc-C
Confidence 4789998775 34432 25678999999999999999999877789999999999999999999 44 4
Q ss_pred CCCeeEE-----------------------------ecccchhHHHHHHHhhccCCCCcEEEecCc-----hH-HHHHHH
Q 006149 590 DKSLKVF-----------------------------NHLFCLQLEEDVNLVLFGLSSESCIKDNSF-----PE-AAVQLG 634 (659)
Q Consensus 590 d~rl~vf-----------------------------~~l~~~~f~~~~~~~Lf~~~~~g~~~~n~~-----~~-~~~~l~ 634 (659)
++|++++ .+|++.+|++.++++| +++|+++.|.. .. ....++
T Consensus 128 ~~rv~v~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L---~pgG~lv~~~~~~~~~~~~~~~~~~ 204 (275)
T 1iy9_A 128 DPRVDVQVDDGFMHIAKSENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKAL---KEDGIFVAQTDNPWFTPELITNVQR 204 (275)
T ss_dssp STTEEEEESCSHHHHHTCCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHE---EEEEEEEEECCCTTTCHHHHHHHHH
T ss_pred CCceEEEECcHHHHHhhCCCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhc---CCCcEEEEEcCCccccHHHHHHHHH
Confidence 5566322 2456789999999999 99999999852 22 233445
Q ss_pred hhcc-CCccc
Q 006149 635 KLVK-FQHLE 643 (659)
Q Consensus 635 ~~~~-f~~~~ 643 (659)
.+.+ |++..
T Consensus 205 ~l~~~F~~v~ 214 (275)
T 1iy9_A 205 DVKEIFPITK 214 (275)
T ss_dssp HHHTTCSEEE
T ss_pred HHHHhCCCeE
Confidence 5555 87644
No 87
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.41 E-value=4.7e-13 Score=144.80 Aligned_cols=107 Identities=16% Similarity=0.209 Sum_probs=92.6
Q ss_pred CCCCeEEEECCCcchHHHHHHHc--CCCeEEEEcCCHHHHHHHHHHhhcC---------CCCcEEEEeecCCC------C
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRD---------RSDMRWRVMDMTSM------Q 129 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~--g~~~VtgvD~S~~~i~~~~~~~~~~---------~~~i~~~~~D~~~l------~ 129 (659)
.++.+|||+|||+|.++..+++. ...+|+|+|+|+.+++.++++.... .++++++++|+.++ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 46789999999999999999886 2359999999999999887665321 26899999999997 8
Q ss_pred CCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 130 FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 130 ~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+++++||+|++..+++++.+. ..+++++.++|||||++++.++.
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d~-------~~~l~~~~r~LkpgG~l~i~~~~ 205 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTNK-------LALFKEIHRVLRDGGELYFSDVY 205 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSCH-------HHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCCCEEEEEEccchhcCCCH-------HHHHHHHHHHcCCCCEEEEEEec
Confidence 888999999999999998664 49999999999999999998754
No 88
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.41 E-value=8.8e-13 Score=126.57 Aligned_cols=118 Identities=16% Similarity=0.192 Sum_probs=95.7
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCC
Q 006149 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM 128 (659)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l 128 (659)
..+...+...+.. .++.+|||+|||+|.++..++..+ .+|+++|+++.+++.++++....+ .++.+.++|+.+
T Consensus 19 ~~~~~~~~~~~~~---~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~- 93 (192)
T 1l3i_A 19 MEVRCLIMCLAEP---GKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE- 93 (192)
T ss_dssp HHHHHHHHHHHCC---CTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-
T ss_pred HHHHHHHHHhcCC---CCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-
Confidence 4556666776654 577899999999999999999887 699999999999998887665443 479999999877
Q ss_pred CCCC-CcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCch
Q 006149 129 QFMD-ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (659)
Q Consensus 129 ~~~~-~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~ 183 (659)
+++. ++||+|++.+++++ ...+++++.++|+|||++++.......
T Consensus 94 ~~~~~~~~D~v~~~~~~~~----------~~~~l~~~~~~l~~gG~l~~~~~~~~~ 139 (192)
T 1l3i_A 94 ALCKIPDIDIAVVGGSGGE----------LQEILRIIKDKLKPGGRIIVTAILLET 139 (192)
T ss_dssp HHTTSCCEEEEEESCCTTC----------HHHHHHHHHHTEEEEEEEEEEECBHHH
T ss_pred hcccCCCCCEEEECCchHH----------HHHHHHHHHHhcCCCcEEEEEecCcch
Confidence 3333 58999999877654 358999999999999999998876433
No 89
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.40 E-value=3.5e-13 Score=140.31 Aligned_cols=110 Identities=15% Similarity=0.146 Sum_probs=87.5
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCC-------------------------------
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR------------------------------- 115 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~------------------------------- 115 (659)
++.+|||||||+|.++..++.. +..+|+|+|+|+.+++.++++.....
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 5789999999999999999987 44699999999999998876643221
Q ss_pred ----------------------------CCcEEEEeecCCCC-----CCCCcccEEEecccccccCCcccchHHHHHHHH
Q 006149 116 ----------------------------SDMRWRVMDMTSMQ-----FMDETFDVILDKGGLDALMEPELGHKLGNQYLS 162 (659)
Q Consensus 116 ----------------------------~~i~~~~~D~~~l~-----~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ 162 (659)
.+++|+++|+...+ +.+++||+|++..+++++.-. .+.....++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~-~~~~~~~~~l~ 204 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLN-WGDEGLKRMFR 204 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHH-HHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhc-CCHHHHHHHHH
Confidence 47999999998754 567899999999999776200 01112679999
Q ss_pred HHHhccccCeEEEEEE
Q 006149 163 EVKRLLKSGGKFVCLT 178 (659)
Q Consensus 163 ei~rvLkpGG~lvi~~ 178 (659)
+++++|+|||+|++..
T Consensus 205 ~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 205 RIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHEEEEEEEEEEC
T ss_pred HHHHHhCCCcEEEEec
Confidence 9999999999999864
No 90
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.40 E-value=2.4e-12 Score=136.80 Aligned_cols=115 Identities=15% Similarity=0.148 Sum_probs=88.5
Q ss_pred hHHHHHHHHHHhhhhhhhhhccccCCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCC-----CC
Q 006149 516 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-----QD 590 (659)
Q Consensus 516 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~-----~d 590 (659)
+.||++|++.. + . +++|++||+||+|+|++++.+.++.+ .+|++|||||.|+++||+||+.. ++
T Consensus 173 ~~YhE~l~~~~-~-~--------~p~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~d 241 (364)
T 2qfm_A 173 LAYTRAIMGSG-K-E--------DYTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDN 241 (364)
T ss_dssp HHHHHHHTTTT-C-C--------CCTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSS
T ss_pred hHHHHHHhhhh-h-h--------CCCCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccc
Confidence 47999887632 2 1 36789999999999999999998877 69999999999999999999631 22
Q ss_pred C---Ce---------------------eEE-----e--------cccchhHHHHH----HHhhccCCCCcEEEecC----
Q 006149 591 K---SL---------------------KVF-----N--------HLFCLQLEEDV----NLVLFGLSSESCIKDNS---- 625 (659)
Q Consensus 591 ~---rl---------------------~vf-----~--------~l~~~~f~~~~----~~~Lf~~~~~g~~~~n~---- 625 (659)
+ |+ |+. + +|++.+||+.| .++| +|+|+++.|+
T Consensus 242 p~~~rv~vi~~Da~~~L~~~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L---~pgGilv~qs~s~~ 318 (364)
T 2qfm_A 242 LKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVL---KQDGKYFTQGNCVN 318 (364)
T ss_dssp SEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTE---EEEEEEEEEEEETT
T ss_pred cCCCcEEEEECcHHHHHHhhhccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhC---CCCcEEEEEcCCcc
Confidence 2 44 221 2 36889999999 8999 9999999876
Q ss_pred chHHHHHHHh-hcc-CCcccc
Q 006149 626 FPEAAVQLGK-LVK-FQHLEI 644 (659)
Q Consensus 626 ~~~~~~~l~~-~~~-f~~~~~ 644 (659)
.++....+++ +.+ |+.+..
T Consensus 319 ~~e~~~~~~~~l~~~F~~v~~ 339 (364)
T 2qfm_A 319 LTEALSLYEEQLGRLYCPVEF 339 (364)
T ss_dssp CHHHHHHHHHHHTTSSSCEEE
T ss_pred hHHHHHHHHHHHHHhCCceEE
Confidence 4566667776 444 887765
No 91
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.40 E-value=3.1e-12 Score=121.87 Aligned_cols=133 Identities=10% Similarity=0.126 Sum_probs=101.7
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCC
Q 006149 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ 129 (659)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~ 129 (659)
..+...+...+.. .++.+|||+|||+|.++..++. +..+|+++|+++.+++.++++....+ ++++++++|+.+ +
T Consensus 21 ~~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~ 95 (183)
T 2yxd_A 21 EEIRAVSIGKLNL---NKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-V 95 (183)
T ss_dssp HHHHHHHHHHHCC---CTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-H
T ss_pred HHHHHHHHHHcCC---CCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-c
Confidence 4555666777654 5678999999999999999988 44599999999999999887765544 579999999988 6
Q ss_pred CCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCchhhcchhhhh-ccCceEEEee
Q 006149 130 FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKF-RFGWKMSVHA 202 (659)
Q Consensus 130 ~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~~~~~l~~~~-~~~w~~~~~~ 202 (659)
+++++||+|++.++ .. ...+++++.++ |||++++.+....... .+...+ ..+|.+....
T Consensus 96 ~~~~~~D~i~~~~~----~~-------~~~~l~~~~~~--~gG~l~~~~~~~~~~~-~~~~~l~~~g~~~~~~~ 155 (183)
T 2yxd_A 96 LDKLEFNKAFIGGT----KN-------IEKIIEILDKK--KINHIVANTIVLENAA-KIINEFESRGYNVDAVN 155 (183)
T ss_dssp GGGCCCSEEEECSC----SC-------HHHHHHHHHHT--TCCEEEEEESCHHHHH-HHHHHHHHTTCEEEEEE
T ss_pred ccCCCCcEEEECCc----cc-------HHHHHHHHhhC--CCCEEEEEecccccHH-HHHHHHHHcCCeEEEEE
Confidence 77789999999877 11 45889999999 9999999987644432 233333 3357666543
No 92
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.39 E-value=1e-12 Score=137.75 Aligned_cols=113 Identities=16% Similarity=0.126 Sum_probs=93.2
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhc--------CCCCcEEEEeecCCCC----CC--CC
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR--------DRSDMRWRVMDMTSMQ----FM--DE 133 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~--------~~~~i~~~~~D~~~l~----~~--~~ 133 (659)
++.+|||+|||+|.++..++..+..+|+++|+|+.+++.++++... ...++.++++|+.+++ ++ ++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 5679999999999999999887666999999999999998877643 2247899999999876 53 45
Q ss_pred cccEEEeccccccc-CCcccchHHHHHHHHHHHhccccCeEEEEEEcCCchh
Q 006149 134 TFDVILDKGGLDAL-MEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHV 184 (659)
Q Consensus 134 sFDvVi~~g~l~~l-~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~~ 184 (659)
+||+|++..+++++ .+.+ ....++.++.++|||||++++.++....+
T Consensus 114 ~fD~V~~~~~l~~~~~~~~----~~~~~l~~~~~~LkpgG~li~~~~~~~~l 161 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYE----QADMMLRNACERLSPGGYFIGTTPNSFEL 161 (313)
T ss_dssp CEEEEEEETCGGGGGGSHH----HHHHHHHHHHTTEEEEEEEEEEEECHHHH
T ss_pred CEEEEEEecchhhccCCHH----HHHHHHHHHHHHhCCCcEEEEecCChHHH
Confidence 99999999999987 3322 25699999999999999999999875443
No 93
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.39 E-value=5.9e-13 Score=139.16 Aligned_cols=111 Identities=14% Similarity=0.118 Sum_probs=94.0
Q ss_pred CCCCeEEEECCCcchHHHHHH--HcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCcccEEEecc
Q 006149 67 SPPPQILVPGCGNSRLSEHLY--DAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKG 142 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La--~~g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDvVi~~g 142 (659)
.++.+|||+|||+|..+..++ ..+..+|+++|+|+.+++.++++....+ .+++++++|+.+++++ ++||+|++.+
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~ 195 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNG 195 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCS
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECC
Confidence 467899999999999999985 3334599999999999999988775544 3499999999999887 9999999999
Q ss_pred cccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCc
Q 006149 143 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (659)
Q Consensus 143 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~ 182 (659)
+++++.++. ....+++++.++|||||++++.++..+
T Consensus 196 ~~~~~~~~~----~~~~~l~~~~~~LkpgG~l~i~~~~~~ 231 (305)
T 3ocj_A 196 LNIYEPDDA----RVTELYRRFWQALKPGGALVTSFLTPP 231 (305)
T ss_dssp SGGGCCCHH----HHHHHHHHHHHHEEEEEEEEEECCCCC
T ss_pred hhhhcCCHH----HHHHHHHHHHHhcCCCeEEEEEecCCC
Confidence 999987654 244689999999999999999886643
No 94
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.39 E-value=3.1e-12 Score=122.91 Aligned_cols=120 Identities=18% Similarity=0.220 Sum_probs=96.6
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC-CC--cEEEEeecCCC
Q 006149 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SD--MRWRVMDMTSM 128 (659)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~-~~--i~~~~~D~~~l 128 (659)
.....+.+.+.. .++.+|||+|||+|.++..++..+ .+|+++|+++.+++.++++....+ .+ ++++++|+.+
T Consensus 39 ~~~~~l~~~~~~---~~~~~vLdiG~G~G~~~~~~~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~- 113 (194)
T 1dus_A 39 KGTKILVENVVV---DKDDDILDLGCGYGVIGIALADEV-KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE- 113 (194)
T ss_dssp HHHHHHHHHCCC---CTTCEEEEETCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-
T ss_pred hHHHHHHHHccc---CCCCeEEEeCCCCCHHHHHHHHcC-CeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc-
Confidence 345566676654 477899999999999999999884 499999999999999887765543 33 9999999988
Q ss_pred CCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCc
Q 006149 129 QFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (659)
Q Consensus 129 ~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~ 182 (659)
++++++||+|++...+++. ......+++++.++|+|||++++.+....
T Consensus 114 ~~~~~~~D~v~~~~~~~~~------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 161 (194)
T 1dus_A 114 NVKDRKYNKIITNPPIRAG------KEVLHRIIEEGKELLKDNGEIWVVIQTKQ 161 (194)
T ss_dssp TCTTSCEEEEEECCCSTTC------HHHHHHHHHHHHHHEEEEEEEEEEEESTH
T ss_pred ccccCCceEEEECCCcccc------hhHHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 4456899999998776642 11256899999999999999999988743
No 95
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.39 E-value=1.6e-12 Score=129.74 Aligned_cols=90 Identities=14% Similarity=0.233 Sum_probs=78.8
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeec-CCCCCC-CCcccEEEeccccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDM-TSMQFM-DETFDVILDKGGLD 145 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~-~~l~~~-~~sFDvVi~~g~l~ 145 (659)
++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++ .++++++++|+ ..++++ +++||+|++.
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~----~~~~~~~~~d~~~~~~~~~~~~fD~v~~~---- 118 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLARAN----APHADVYEWNGKGELPAGLGAPFGLIVSR---- 118 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHH----CTTSEEEECCSCSSCCTTCCCCEEEEEEE----
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHh----CCCceEEEcchhhccCCcCCCCEEEEEeC----
Confidence 678999999999999999999876 999999999999988665 46899999999 567887 8999999986
Q ss_pred ccCCcccchHHHHHHHHHHHhccccCeEEE
Q 006149 146 ALMEPELGHKLGNQYLSEVKRLLKSGGKFV 175 (659)
Q Consensus 146 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~lv 175 (659)
.+.. .+++++.++|||||+++
T Consensus 119 --~~~~-------~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 119 --RGPT-------SVILRLPELAAPDAHFL 139 (226)
T ss_dssp --SCCS-------GGGGGHHHHEEEEEEEE
T ss_pred --CCHH-------HHHHHHHHHcCCCcEEE
Confidence 2222 77999999999999999
No 96
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.39 E-value=3.7e-12 Score=121.27 Aligned_cols=117 Identities=19% Similarity=0.225 Sum_probs=92.1
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCC-C-CcEEEEeecCC
Q 006149 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR-S-DMRWRVMDMTS 127 (659)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~-~-~i~~~~~D~~~ 127 (659)
..+...+...+.. .++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.++++....+ + ++ ++++|+.+
T Consensus 11 ~~~~~~~~~~~~~---~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~ 86 (178)
T 3hm2_A 11 QHVRALAISALAP---KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPR 86 (178)
T ss_dssp HHHHHHHHHHHCC---CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTG
T ss_pred HHHHHHHHHHhcc---cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHh
Confidence 3445556666654 57789999999999999999887 34589999999999999887765543 3 67 88888855
Q ss_pred CCCCC--CcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCch
Q 006149 128 MQFMD--ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (659)
Q Consensus 128 l~~~~--~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~ 183 (659)
.++. ++||+|++.+++++ . .+++++.++|+|||++++.+...+.
T Consensus 87 -~~~~~~~~~D~i~~~~~~~~----~-------~~l~~~~~~L~~gG~l~~~~~~~~~ 132 (178)
T 3hm2_A 87 -AFDDVPDNPDVIFIGGGLTA----P-------GVFAAAWKRLPVGGRLVANAVTVES 132 (178)
T ss_dssp -GGGGCCSCCSEEEECC-TTC----T-------THHHHHHHTCCTTCEEEEEECSHHH
T ss_pred -hhhccCCCCCEEEECCcccH----H-------HHHHHHHHhcCCCCEEEEEeecccc
Confidence 3333 89999999888876 2 7899999999999999998876433
No 97
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.38 E-value=5.6e-13 Score=142.50 Aligned_cols=104 Identities=14% Similarity=0.126 Sum_probs=87.8
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCcccEEEeccccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGLD 145 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~ 145 (659)
++.+|||+|||+|.++..+++.|..+|+|+|+|+ +++.++++....+ .+++++++|+.++++++++||+|++..+.+
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~ 144 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGY 144 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBB
T ss_pred CCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccccc
Confidence 5789999999999999999999878999999995 9998887765544 359999999999998889999999987655
Q ss_pred ccCCcccchHHHHHHHHHHHhccccCeEEEE
Q 006149 146 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVC 176 (659)
Q Consensus 146 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi 176 (659)
++.... ....++.++.++|||||+++.
T Consensus 145 ~l~~~~----~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 145 CLFYES----MLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp TBTBTC----CHHHHHHHHHHHEEEEEEEES
T ss_pred cccCch----hHHHHHHHHHHhCCCCCEEcc
Confidence 543222 156899999999999999883
No 98
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.36 E-value=1.3e-12 Score=129.28 Aligned_cols=109 Identities=18% Similarity=0.291 Sum_probs=91.0
Q ss_pred HHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCC--CCCCCC
Q 006149 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTS--MQFMDE 133 (659)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~--l~~~~~ 133 (659)
.+.+++. .++.+|||+|||+|.++..+++.+ .+++++|+|+.+++.++++. ..+.++|+.+ .+++++
T Consensus 24 ~l~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~------~~~~~~d~~~~~~~~~~~ 92 (230)
T 3cc8_A 24 NLLKHIK----KEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKL------DHVVLGDIETMDMPYEEE 92 (230)
T ss_dssp HHHTTCC----TTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTS------SEEEESCTTTCCCCSCTT
T ss_pred HHHHHhc----cCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhC------CcEEEcchhhcCCCCCCC
Confidence 3555553 367899999999999999999887 59999999999988765432 3789999987 567788
Q ss_pred cccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCc
Q 006149 134 TFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (659)
Q Consensus 134 sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~ 182 (659)
+||+|++..+++++.++. .+++++.++|+|||++++.+....
T Consensus 93 ~fD~v~~~~~l~~~~~~~-------~~l~~~~~~L~~gG~l~~~~~~~~ 134 (230)
T 3cc8_A 93 QFDCVIFGDVLEHLFDPW-------AVIEKVKPYIKQNGVILASIPNVS 134 (230)
T ss_dssp CEEEEEEESCGGGSSCHH-------HHHHHTGGGEEEEEEEEEEEECTT
T ss_pred ccCEEEECChhhhcCCHH-------HHHHHHHHHcCCCCEEEEEeCCcc
Confidence 999999999999987654 899999999999999999886543
No 99
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.36 E-value=3e-12 Score=136.38 Aligned_cols=115 Identities=19% Similarity=0.184 Sum_probs=92.0
Q ss_pred HHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCC
Q 006149 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQF 130 (659)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~ 130 (659)
+...+.+.+.. .++.+|||+|||+|.++..+++.|..+|+|+|+|+ +++.++++....+ ++++++++|+.++++
T Consensus 52 ~~~~i~~~~~~---~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 127 (340)
T 2fyt_A 52 YRDFIYQNPHI---FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHL 127 (340)
T ss_dssp HHHHHHHCGGG---TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC
T ss_pred HHHHHHhhhhh---cCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcC
Confidence 33445554433 46789999999999999999998877999999997 8988877765544 689999999999988
Q ss_pred CCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEE
Q 006149 131 MDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFV 175 (659)
Q Consensus 131 ~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lv 175 (659)
++++||+|++..+.+.+.... ....++.++.++|||||+++
T Consensus 128 ~~~~~D~Ivs~~~~~~l~~~~----~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 128 PVEKVDVIISEWMGYFLLFES----MLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp SCSCEEEEEECCCBTTBTTTC----HHHHHHHHHHHHEEEEEEEE
T ss_pred CCCcEEEEEEcCchhhccCHH----HHHHHHHHHHhhcCCCcEEE
Confidence 888999999987544433222 25689999999999999987
No 100
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.36 E-value=3.3e-12 Score=125.18 Aligned_cols=104 Identities=13% Similarity=0.156 Sum_probs=88.2
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCCCCCcccEEEeccccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQFMDETFDVILDKGGLD 145 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~ 145 (659)
.++.+|||+|||+|.++..+++.+..+|+++|+|+.+++.++++....+ .++++.++|+.+.. +++||+|++...++
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~fD~i~~~~~~~ 136 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV--DGKFDLIVANILAE 136 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC--CSCEEEEEEESCHH
T ss_pred cCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC--CCCceEEEECCcHH
Confidence 3578999999999999999998877799999999999999888765544 34999999998753 58999999987776
Q ss_pred ccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCc
Q 006149 146 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (659)
Q Consensus 146 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~ 182 (659)
+ ...+++++.++|+|||++++.++...
T Consensus 137 ~----------~~~~l~~~~~~L~~gG~l~~~~~~~~ 163 (205)
T 3grz_A 137 I----------LLDLIPQLDSHLNEDGQVIFSGIDYL 163 (205)
T ss_dssp H----------HHHHGGGSGGGEEEEEEEEEEEEEGG
T ss_pred H----------HHHHHHHHHHhcCCCCEEEEEecCcc
Confidence 5 35889999999999999999876543
No 101
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.36 E-value=4.1e-12 Score=127.25 Aligned_cols=106 Identities=16% Similarity=0.255 Sum_probs=84.9
Q ss_pred hCCCCCCCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCC----CCCCCCcc
Q 006149 61 IGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTS----MQFMDETF 135 (659)
Q Consensus 61 l~~~~~~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~----l~~~~~sF 135 (659)
+......++.+|||+|||+|.++..+++. |..+|+|+|+|+.+++.+++++... +++.++++|+.+ .++. ++|
T Consensus 67 l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~-~~~ 144 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-ENIIPILGDANKPQEYANIV-EKV 144 (230)
T ss_dssp CCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-TTEEEEECCTTCGGGGTTTS-CCE
T ss_pred ccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-CCeEEEECCCCCcccccccC-ccE
Confidence 43333357789999999999999999987 5469999999999999887765433 789999999998 6666 789
Q ss_pred cEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEE
Q 006149 136 DVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCL 177 (659)
Q Consensus 136 DvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~ 177 (659)
|+|+ +++..+. ....+++++.++|||||++++.
T Consensus 145 D~v~-----~~~~~~~----~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 145 DVIY-----EDVAQPN----QAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEE-----ECCCSTT----HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEE-----EecCChh----HHHHHHHHHHHhCCCCcEEEEE
Confidence 9999 2333321 2457899999999999999986
No 102
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.36 E-value=3e-12 Score=132.21 Aligned_cols=141 Identities=13% Similarity=0.157 Sum_probs=97.1
Q ss_pred HhhHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcch----HHHHHHHc-C----CCeEEEEc
Q 006149 28 KENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSR----LSEHLYDA-G----FHGITNVD 98 (659)
Q Consensus 28 ~eyWd~~y~~~~~~~~fewy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~----~s~~La~~-g----~~~VtgvD 98 (659)
.+.|+.++..-. -..-.||.+...+...-..++.. .+..+|||+|||+|. ++..|++. + ..+|+|+|
T Consensus 69 ~~e~~~l~~~lt-~~~t~FfRd~~~f~~l~~~llp~---~~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atD 144 (274)
T 1af7_A 69 SAEWQAFINALT-TNLTAFFREAHHFPILAEHARRR---HGEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASD 144 (274)
T ss_dssp CTHHHHHHHHHC-CCCCCTTTTTTHHHHHHHHHHHS---CSCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEE
T ss_pred HHHHHHHHHHHh-hcCccccCChHHHHHHHHHccCC---CCCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEE
Confidence 345666555431 12223455433333222223332 135799999999998 55566654 3 13899999
Q ss_pred CCHHHHHHHHHHhh--------------------c---CC---------CCcEEEEeecCCCCCC-CCcccEEEeccccc
Q 006149 99 FSKVVISDMLRRNV--------------------R---DR---------SDMRWRVMDMTSMQFM-DETFDVILDKGGLD 145 (659)
Q Consensus 99 ~S~~~i~~~~~~~~--------------------~---~~---------~~i~~~~~D~~~l~~~-~~sFDvVi~~g~l~ 145 (659)
+|+.||+.|++..- . .+ .++.|.++|+.+.+++ .++||+|+|.+++.
T Consensus 145 is~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvli 224 (274)
T 1af7_A 145 IDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMI 224 (274)
T ss_dssp SCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGG
T ss_pred CCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchH
Confidence 99999998876421 0 00 3689999999997665 57899999999999
Q ss_pred ccCCcccchHHHHHHHHHHHhccccCeEEEEE
Q 006149 146 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCL 177 (659)
Q Consensus 146 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~ 177 (659)
++.++. ..++++++++.|+|||++++.
T Consensus 225 yf~~~~-----~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 225 YFDKTT-----QEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp GSCHHH-----HHHHHHHHGGGEEEEEEEEEC
T ss_pred hCCHHH-----HHHHHHHHHHHhCCCcEEEEE
Confidence 885443 679999999999999999873
No 103
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.36 E-value=5.5e-12 Score=126.97 Aligned_cols=124 Identities=21% Similarity=0.247 Sum_probs=97.0
Q ss_pred cccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc-C-CCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEe
Q 006149 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVM 123 (659)
Q Consensus 46 wy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~-g-~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~ 123 (659)
|......+...+.+-+.....+|+.+|||+|||+|.++..+++. | .+.|+|+|+++.|++.+++++ ...+++..+.+
T Consensus 55 w~p~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a-~~~~ni~~V~~ 133 (233)
T 4df3_A 55 WNAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVV-RDRRNIFPILG 133 (233)
T ss_dssp CCTTTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHS-TTCTTEEEEES
T ss_pred ECCCchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhh-HhhcCeeEEEE
Confidence 54444466666777666666789999999999999999999987 4 378999999999999886665 45578999999
Q ss_pred ecCCC---CCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 124 DMTSM---QFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 124 D~~~l---~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
|.... ++..+++|+|++... +. + ....++.++.++|||||++++...
T Consensus 134 d~~~p~~~~~~~~~vDvVf~d~~--~~---~----~~~~~l~~~~r~LKpGG~lvI~ik 183 (233)
T 4df3_A 134 DARFPEKYRHLVEGVDGLYADVA--QP---E----QAAIVVRNARFFLRDGGYMLMAIK 183 (233)
T ss_dssp CTTCGGGGTTTCCCEEEEEECCC--CT---T----HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eccCccccccccceEEEEEEecc--CC---h----hHHHHHHHHHHhccCCCEEEEEEe
Confidence 98764 456789999985322 11 1 145899999999999999998653
No 104
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.35 E-value=3.1e-12 Score=130.92 Aligned_cols=116 Identities=16% Similarity=0.165 Sum_probs=93.6
Q ss_pred HHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc-CC-CeEEEEcCCHH------HHHHHHHHhhcCC--CCcEEEEee-
Q 006149 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GF-HGITNVDFSKV------VISDMLRRNVRDR--SDMRWRVMD- 124 (659)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~-g~-~~VtgvD~S~~------~i~~~~~~~~~~~--~~i~~~~~D- 124 (659)
.+...+.. .++.+|||||||+|.++..+++. |. .+|+|+|+|+. +++.++++....+ ++++++++|
T Consensus 34 ~l~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 110 (275)
T 3bkx_A 34 AIAEAWQV---KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTN 110 (275)
T ss_dssp HHHHHHTC---CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCC
T ss_pred HHHHHcCC---CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECCh
Confidence 34444443 57889999999999999999987 43 59999999997 8988887765544 579999998
Q ss_pred --cCCCCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 125 --MTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 125 --~~~l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
...+++++++||+|++.++++++.++. .+++.+.++++|||++++.++..
T Consensus 111 ~~~~~~~~~~~~fD~v~~~~~l~~~~~~~-------~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 111 LSDDLGPIADQHFDRVVLAHSLWYFASAN-------ALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp TTTCCGGGTTCCCSEEEEESCGGGSSCHH-------HHHHHHHHHTTTCSEEEEEEECS
T ss_pred hhhccCCCCCCCEEEEEEccchhhCCCHH-------HHHHHHHHHhCCCCEEEEEEecC
Confidence 455677789999999999999987654 57777777888899999998764
No 105
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.35 E-value=1.8e-12 Score=127.38 Aligned_cols=106 Identities=13% Similarity=0.095 Sum_probs=86.1
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC---CCcEEEEeecCCCCC--CCCc-ccEEEec
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR---SDMRWRVMDMTSMQF--MDET-FDVILDK 141 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~---~~i~~~~~D~~~l~~--~~~s-FDvVi~~ 141 (659)
++.+|||+|||+|.++..++..+..+|+++|+|+.+++.++++....+ ++++++++|+.++.. ++++ ||+|++.
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 467999999999999998888877799999999999999987765554 489999999987532 3678 9999988
Q ss_pred ccccccCCcccchHHHHHHHHHH--HhccccCeEEEEEEcCC
Q 006149 142 GGLDALMEPELGHKLGNQYLSEV--KRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 142 g~l~~l~~~~~~~~~~~~~l~ei--~rvLkpGG~lvi~~~~~ 181 (659)
..++ . .. ...++..+ .++|+|||++++.....
T Consensus 133 ~~~~-~--~~-----~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 133 PPFH-F--NL-----AEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCSS-S--CH-----HHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCC-C--cc-----HHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 7743 1 11 45778888 77899999999888653
No 106
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.35 E-value=6.2e-12 Score=130.08 Aligned_cols=121 Identities=12% Similarity=0.059 Sum_probs=96.6
Q ss_pred cccccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEE
Q 006149 44 FEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWR 121 (659)
Q Consensus 44 fewy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~ 121 (659)
+.|+......+..+..++. ++.+|||+|||+|.++..+++.+..+|+|+|+|+.+++.+++.....+ .+++++
T Consensus 106 ~~f~~~~~~~~~~l~~~~~-----~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~ 180 (278)
T 2frn_A 106 IMFSPANVKERVRMAKVAK-----PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAY 180 (278)
T ss_dssp SCCCGGGHHHHHHHHHHCC-----TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEE
T ss_pred eeEcCCcHHHHHHHHHhCC-----CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEE
Confidence 3355555555666666663 578999999999999999999876579999999999999887765444 348999
Q ss_pred EeecCCCCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 122 VMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 122 ~~D~~~l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
++|+.+++. +++||+|++..... ...++.++.++|+|||++++.+...
T Consensus 181 ~~D~~~~~~-~~~fD~Vi~~~p~~-----------~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 181 NMDNRDFPG-ENIADRILMGYVVR-----------THEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp CSCTTTCCC-CSCEEEEEECCCSS-----------GGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ECCHHHhcc-cCCccEEEECCchh-----------HHHHHHHHHHHCCCCeEEEEEEeec
Confidence 999999876 68999999853321 1378999999999999999988764
No 107
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.34 E-value=3e-12 Score=130.85 Aligned_cols=99 Identities=24% Similarity=0.340 Sum_probs=84.2
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEecccccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~ 146 (659)
++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.++++. +++.+.++|+.++++++++||+|++.++.
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~~-- 158 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY----PQVTFCVASSHRLPFSDTSMDAIIRIYAP-- 158 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC----TTSEEEECCTTSCSBCTTCEEEEEEESCC--
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcchhhCCCCCCceeEEEEeCCh--
Confidence 6789999999999999999987 2349999999999998776543 57899999999999888999999975441
Q ss_pred cCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCchh
Q 006149 147 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHV 184 (659)
Q Consensus 147 l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~~ 184 (659)
..++++.++|||||++++.+....++
T Consensus 159 ------------~~l~~~~~~L~pgG~l~~~~~~~~~~ 184 (269)
T 1p91_A 159 ------------CKAEELARVVKPGGWVITATPGPRHL 184 (269)
T ss_dssp ------------CCHHHHHHHEEEEEEEEEEEECTTTT
T ss_pred ------------hhHHHHHHhcCCCcEEEEEEcCHHHH
Confidence 34899999999999999999876554
No 108
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.34 E-value=3.9e-12 Score=146.16 Aligned_cols=116 Identities=15% Similarity=0.116 Sum_probs=96.7
Q ss_pred HHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCC--CeEEEEcCCHHHHHHHHHHhhc-------CCCCcEEEEeecC
Q 006149 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF--HGITNVDFSKVVISDMLRRNVR-------DRSDMRWRVMDMT 126 (659)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~--~~VtgvD~S~~~i~~~~~~~~~-------~~~~i~~~~~D~~ 126 (659)
.+.+++.. .++.+|||+|||+|.++..|++.+. .+|+|+|+|+.+++.++++... ..++++++++|+.
T Consensus 712 ~LLelL~~---~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~ 788 (950)
T 3htx_A 712 YALKHIRE---SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSIL 788 (950)
T ss_dssp HHHHHHHH---SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTT
T ss_pred HHHHHhcc---cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchH
Confidence 44555543 3678999999999999999998862 5999999999999998775432 2357999999999
Q ss_pred CCCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 127 SMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 127 ~l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
++++++++||+|++..+++|+.++. ...+++++.++|||| .+++.+..
T Consensus 789 dLp~~d~sFDlVV~~eVLeHL~dp~-----l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 789 EFDSRLHDVDIGTCLEVIEHMEEDQ-----ACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp SCCTTSCSCCEEEEESCGGGSCHHH-----HHHHHHHHHHTTCCS-EEEEEECB
T ss_pred hCCcccCCeeEEEEeCchhhCChHH-----HHHHHHHHHHHcCCC-EEEEEecC
Confidence 9999889999999999999987654 557999999999999 77777764
No 109
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.34 E-value=1e-11 Score=118.64 Aligned_cols=101 Identities=14% Similarity=0.165 Sum_probs=80.9
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEeccccccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDAL 147 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~l 147 (659)
++.+|||+|||+|.++..+++.+ +|+|+|+|+.+++. ..+++++++|+.+ ++++++||+|+++..+++.
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~--------~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~ 91 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES--------HRGGNLVRADLLC-SINQESVDVVVFNPPYVPD 91 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT--------CSSSCEEECSTTT-TBCGGGCSEEEECCCCBTT
T ss_pred CCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc--------ccCCeEEECChhh-hcccCCCCEEEECCCCccC
Confidence 56799999999999999999887 99999999988874 4678999999988 6667899999998888765
Q ss_pred CCcc--cchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 148 MEPE--LGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 148 ~~~~--~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
.+.. .+......++.++.+.| |||++++....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~ 125 (170)
T 3q87_B 92 TDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIE 125 (170)
T ss_dssp CCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEG
T ss_pred CccccccCCcchHHHHHHHHhhC-CCCEEEEEEec
Confidence 4330 00000236788888888 99999998865
No 110
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.34 E-value=8.8e-12 Score=123.27 Aligned_cols=113 Identities=16% Similarity=0.146 Sum_probs=87.8
Q ss_pred CCCeEEEECCCcchHHHHHHHcC-CCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCC--CCCCcccEEEeccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ--FMDETFDVILDKGG 143 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g-~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~--~~~~sFDvVi~~g~ 143 (659)
++.+|||+|||+|.++..++... ..+|+|+|+|+.+++.++++....+ .++.++++|+.+++ +++++||+|++...
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 57899999999999999999873 3599999999999999887765444 68999999999876 77889999998754
Q ss_pred ccccCCcccch-HHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 144 LDALMEPELGH-KLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 144 l~~l~~~~~~~-~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
..+........ .....++.++.++|+|||++++.+..
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN 158 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC
Confidence 32211000000 01257999999999999999998754
No 111
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.33 E-value=4.6e-12 Score=125.71 Aligned_cols=113 Identities=11% Similarity=0.119 Sum_probs=86.9
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCC--CCCCcccEEEeccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ--FMDETFDVILDKGG 143 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~--~~~~sFDvVi~~g~ 143 (659)
++.+|||||||+|.++..|++. +..+|+|+|+|+.+++.++++....+ +++.++++|+.+++ +++++||.|+....
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 5679999999999999999987 34599999999999999887765544 67999999999875 77889999986543
Q ss_pred ccccCCcccchH-HHHHHHHHHHhccccCeEEEEEEcC
Q 006149 144 LDALMEPELGHK-LGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 144 l~~l~~~~~~~~-~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
..+......... ....+++++.++|+|||.+++.+..
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~ 155 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN 155 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC
Confidence 222111000000 0258899999999999999998854
No 112
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.33 E-value=2.6e-13 Score=136.46 Aligned_cols=142 Identities=11% Similarity=0.128 Sum_probs=102.6
Q ss_pred CCCHhhHHHHHhhcCC-CCcc-----ccccchhH-HHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEE
Q 006149 25 FTSKENWDKFFTIRGI-GDSF-----EWYAEWPQ-LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNV 97 (659)
Q Consensus 25 f~~~eyWd~~y~~~~~-~~~f-----ewy~~~~~-l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~Vtgv 97 (659)
.....||+..+..... ...+ .|+...+. +...+...+.. ..++.+|||+|||+|.++..+++.+ .+|+|+
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~vLD~gcG~G~~~~~la~~~-~~v~~v 106 (241)
T 3gdh_A 30 PELAKYWAQRYRLFSRFDDGIKLDREGWFSVTPEKIAEHIAGRVSQ--SFKCDVVVDAFCGVGGNTIQFALTG-MRVIAI 106 (241)
T ss_dssp GGGHHHHHTHHHHCTTGGGTCCCCHHHHHHCCCHHHHHHHHHHHHH--HSCCSEEEETTCTTSHHHHHHHHTT-CEEEEE
T ss_pred HHHHHHHHhhhhhHhhccCCceecccceeecCHHHHHHHHHHHhhh--ccCCCEEEECccccCHHHHHHHHcC-CEEEEE
Confidence 3456799887765410 0011 23322222 23334433321 0257899999999999999999988 599999
Q ss_pred cCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEE
Q 006149 98 DFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFV 175 (659)
Q Consensus 98 D~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lv 175 (659)
|+|+.+++.++++....+ +++.++++|+.+++ ++++||+|++...+++..... ..+.++.++|+|||.++
T Consensus 107 D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~~~~~~~-------~~~~~~~~~L~pgG~~i 178 (241)
T 3gdh_A 107 DIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWGGPDYAT-------AETFDIRTMMSPDGFEI 178 (241)
T ss_dssp ESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCSSGGGGG-------SSSBCTTTSCSSCHHHH
T ss_pred ECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcCCcchhh-------hHHHHHHhhcCCcceeH
Confidence 999999999987776555 47999999999876 568999999998888865443 46778999999999966
Q ss_pred EE
Q 006149 176 CL 177 (659)
Q Consensus 176 i~ 177 (659)
+.
T Consensus 179 ~~ 180 (241)
T 3gdh_A 179 FR 180 (241)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 113
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.33 E-value=5.3e-12 Score=136.46 Aligned_cols=111 Identities=14% Similarity=0.147 Sum_probs=94.2
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEeccccccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDAL 147 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~l 147 (659)
++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++....+.+++++++|+.+.+.++++||+|+++..+++.
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~ 311 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHVG 311 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCTT
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhhc
Confidence 567999999999999999999976 9999999999999998877666667999999999987767899999999888863
Q ss_pred CCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 148 MEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 148 ~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
.... ......++.++.++|+|||+++++....
T Consensus 312 ~~~~--~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 312 GAVI--LDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp CSSC--CHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred cccc--HHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 2211 1236799999999999999999987653
No 114
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.33 E-value=2.6e-12 Score=126.68 Aligned_cols=138 Identities=13% Similarity=0.018 Sum_probs=101.5
Q ss_pred CCCHhhHHHHHhhcCCCCccccc--cchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcC-C-CeEEEEcCC
Q 006149 25 FTSKENWDKFFTIRGIGDSFEWY--AEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-F-HGITNVDFS 100 (659)
Q Consensus 25 f~~~eyWd~~y~~~~~~~~fewy--~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g-~-~~VtgvD~S 100 (659)
|....+|+..|... ..++.+. ...+.....+.+.+.. .++.+|||+|||+|.++..++..+ . .+|+++|++
T Consensus 37 ~~~~~~~~~~y~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~ 111 (215)
T 2yxe_A 37 FLPEHLKEYAYVDT--PLEIGYGQTISAIHMVGMMCELLDL---KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERI 111 (215)
T ss_dssp GSCGGGGGGTTSCS--CEEEETTEEECCHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESC
T ss_pred cCCchhhhhcccCC--CccCCCCcEeCcHHHHHHHHHhhCC---CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCC
Confidence 55566777766643 1122111 1224455566666654 578899999999999999998874 2 599999999
Q ss_pred HHHHHHHHHHhhcCC-CCcEEEEeecCCCCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 101 KVVISDMLRRNVRDR-SDMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 101 ~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
+.+++.++++....+ .++.+.++|+......+++||+|++..+++++. .++.++|||||++++...
T Consensus 112 ~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~-------------~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 112 PELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTAAGPKIP-------------EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESSBBSSCC-------------HHHHHTEEEEEEEEEEES
T ss_pred HHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECCchHHHH-------------HHHHHHcCCCcEEEEEEC
Confidence 999998887764433 569999999865332367899999999998763 478999999999999876
Q ss_pred C
Q 006149 180 A 180 (659)
Q Consensus 180 ~ 180 (659)
.
T Consensus 179 ~ 179 (215)
T 2yxe_A 179 R 179 (215)
T ss_dssp S
T ss_pred C
Confidence 4
No 115
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.33 E-value=8.3e-12 Score=125.09 Aligned_cols=114 Identities=18% Similarity=0.263 Sum_probs=87.3
Q ss_pred HHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc-C-CCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCC---CCC
Q 006149 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTS---MQF 130 (659)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~-g-~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~---l~~ 130 (659)
.+...+......++.+|||+|||+|.++..|++. | ..+|+|+|+|+.+++.+.+.+... +++.++++|+.+ +++
T Consensus 65 ~~~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~~~~ 143 (233)
T 2ipx_A 65 AILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRM 143 (233)
T ss_dssp HHHTTCSCCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGG
T ss_pred HHHhHHheecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCChhhhcc
Confidence 3433343333457889999999999999999987 3 369999999999988887666443 789999999988 345
Q ss_pred CCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 131 MDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 131 ~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
.+++||+|++... .++ ....++.++.++|||||++++...
T Consensus 144 ~~~~~D~V~~~~~-----~~~----~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 144 LIAMVDVIFADVA-----QPD----QTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp GCCCEEEEEECCC-----CTT----HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCcEEEEEEcCC-----Ccc----HHHHHHHHHHHHcCCCeEEEEEEc
Confidence 5789999998543 221 134678899999999999999654
No 116
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.32 E-value=3.4e-12 Score=121.96 Aligned_cols=121 Identities=13% Similarity=0.132 Sum_probs=92.0
Q ss_pred HHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCC-C
Q 006149 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM-Q 129 (659)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l-~ 129 (659)
+...+...+.. ..++.+|||+|||+|.++..++..+..+|+++|+++.+++.++++....+ .++.++++|+.+. +
T Consensus 18 ~~~~~~~~l~~--~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (177)
T 2esr_A 18 VRGAIFNMIGP--YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAID 95 (177)
T ss_dssp CHHHHHHHHCS--CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHH
T ss_pred HHHHHHHHHHh--hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHH
Confidence 34455566642 13578999999999999999998876799999999999999887765544 4699999999883 4
Q ss_pred CCCCcccEEEecccccccCCcccchHHHHHHHHHHH--hccccCeEEEEEEcCCch
Q 006149 130 FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVK--RLLKSGGKFVCLTLAESH 183 (659)
Q Consensus 130 ~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~--rvLkpGG~lvi~~~~~~~ 183 (659)
..+++||+|++...++.. .....+..+. ++|+|||++++.......
T Consensus 96 ~~~~~fD~i~~~~~~~~~--------~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 96 CLTGRFDLVFLDPPYAKE--------TIVATIEALAAKNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp HBCSCEEEEEECCSSHHH--------HHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred hhcCCCCEEEECCCCCcc--------hHHHHHHHHHhCCCcCCCcEEEEEECCccc
Confidence 445679999987654321 1346677776 999999999998866433
No 117
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.32 E-value=5.3e-12 Score=136.29 Aligned_cols=106 Identities=16% Similarity=0.087 Sum_probs=89.3
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCcccEEEecccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGL 144 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDvVi~~g~l 144 (659)
.++.+|||+|||+|.++..+++.|..+|+|+|+| .+++.++++....+ .+++++++|+.+++++ ++||+|++..+.
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMG 139 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCCB
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcChh
Confidence 5678999999999999999999987799999999 89998887765554 4599999999999877 899999997766
Q ss_pred cccCCcccchHHHHHHHHHHHhccccCeEEEEEE
Q 006149 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (659)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~ 178 (659)
+.+.... ....++.++.++|||||++++..
T Consensus 140 ~~l~~e~----~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 140 YFLLRES----MFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp TTBTTTC----THHHHHHHHHHHEEEEEEEESSE
T ss_pred hcccchH----HHHHHHHHHHhhCCCCeEEEEec
Confidence 6654322 15689999999999999997654
No 118
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.32 E-value=3.2e-12 Score=127.62 Aligned_cols=115 Identities=15% Similarity=0.072 Sum_probs=88.0
Q ss_pred CCCeEEEECCCcchHHHHHHHcC-CCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCC-C--CCCCcccEEEecc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSM-Q--FMDETFDVILDKG 142 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g-~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l-~--~~~~sFDvVi~~g 142 (659)
++.+|||||||+|.++..+++.. ..+|+|||+|+.+++.++++....+ .++.++++|+.++ + +++++||.|++..
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 56899999999999999999874 3589999999999999987765544 6799999999884 3 6789999999764
Q ss_pred cccccCCcccch-HHHHHHHHHHHhccccCeEEEEEEcCCc
Q 006149 143 GLDALMEPELGH-KLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (659)
Q Consensus 143 ~l~~l~~~~~~~-~~~~~~l~ei~rvLkpGG~lvi~~~~~~ 182 (659)
...+........ .....+++++.++|||||++++.+....
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~ 154 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEP 154 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHH
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHH
Confidence 433221111000 0012599999999999999999986543
No 119
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.31 E-value=9.8e-12 Score=120.49 Aligned_cols=118 Identities=15% Similarity=0.185 Sum_probs=92.6
Q ss_pred cchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecC
Q 006149 48 AEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMT 126 (659)
Q Consensus 48 ~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~ 126 (659)
..+..+...+..++. +..+|||+|||+|.++..++.. +..+|+++|+|+.|++.+++++...+....+..+|..
T Consensus 34 p~ld~fY~~~~~~l~-----~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~ 108 (200)
T 3fzg_A 34 ATLNDFYTYVFGNIK-----HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKE 108 (200)
T ss_dssp GGHHHHHHHHHHHSC-----CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCH
T ss_pred HhHHHHHHHHHhhcC-----CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccc
Confidence 345555666667774 5789999999999999999876 3359999999999999998887766654444447776
Q ss_pred CCCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEE
Q 006149 127 SMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (659)
Q Consensus 127 ~l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~ 178 (659)
.. .+.++||+|+...++|++ +.. +..+..+.+.|+|||.||-..
T Consensus 109 ~~-~~~~~~DvVLa~k~LHlL-~~~------~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 109 SD-VYKGTYDVVFLLKMLPVL-KQQ------DVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HH-HTTSEEEEEEEETCHHHH-HHT------TCCHHHHHHTCEEEEEEEEEE
T ss_pred cc-CCCCCcChhhHhhHHHhh-hhh------HHHHHHHHHHhCCCCEEEEeC
Confidence 54 456899999999999999 332 255679999999999998876
No 120
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.31 E-value=1.6e-11 Score=126.84 Aligned_cols=108 Identities=15% Similarity=0.075 Sum_probs=89.5
Q ss_pred CCCeEEEECCCc---chHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCC-----------CCC
Q 006149 68 PPPQILVPGCGN---SRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ-----------FMD 132 (659)
Q Consensus 68 ~~~~ILDiGCG~---G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~-----------~~~ 132 (659)
...+|||||||+ |.++..+... ...+|+++|+|+.|++.++++.. ..++++++++|+.+.+ ++.
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~ 155 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLA-KDPNTAVFTADVRDPEYILNHPDVRRMIDF 155 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHT-TCTTEEEEECCTTCHHHHHHSHHHHHHCCT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcC-CCCCeEEEEeeCCCchhhhccchhhccCCC
Confidence 457999999999 9888776654 23599999999999998877763 3468999999997631 333
Q ss_pred CcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 133 ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 133 ~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
++||+|++.++++++.+.+ ...+|+++.++|+|||+|++.++..
T Consensus 156 ~~~d~v~~~~vlh~~~d~~-----~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 156 SRPAAIMLVGMLHYLSPDV-----VDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp TSCCEEEETTTGGGSCTTT-----HHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCCEEEEEechhhhCCcHH-----HHHHHHHHHHhCCCCcEEEEEEecC
Confidence 5899999999999998754 5699999999999999999998764
No 121
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.31 E-value=3.6e-11 Score=121.69 Aligned_cols=118 Identities=18% Similarity=0.256 Sum_probs=94.5
Q ss_pred hhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc-C-CCeEEEEcCCHHHHHHHHHHhhcC--CCCcEEEEeec
Q 006149 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRD--RSDMRWRVMDM 125 (659)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~-g-~~~VtgvD~S~~~i~~~~~~~~~~--~~~i~~~~~D~ 125 (659)
++.....+...+.. .++.+|||+|||+|.++..+++. + ..+|+++|+++.+++.+++..... .+++.+.++|+
T Consensus 81 ~~~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~ 157 (258)
T 2pwy_A 81 YPKDASAMVTLLDL---APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKL 157 (258)
T ss_dssp CHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCG
T ss_pred cchHHHHHHHHcCC---CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECch
Confidence 33344455565554 57889999999999999999987 4 469999999999999988776543 36899999999
Q ss_pred CCCCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCc
Q 006149 126 TSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (659)
Q Consensus 126 ~~l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~ 182 (659)
.+.++++++||+|++. ..++. .++.++.++|+|||++++.+....
T Consensus 158 ~~~~~~~~~~D~v~~~-----~~~~~-------~~l~~~~~~L~~gG~l~~~~~~~~ 202 (258)
T 2pwy_A 158 EEAELEEAAYDGVALD-----LMEPW-------KVLEKAALALKPDRFLVAYLPNIT 202 (258)
T ss_dssp GGCCCCTTCEEEEEEE-----SSCGG-------GGHHHHHHHEEEEEEEEEEESCHH
T ss_pred hhcCCCCCCcCEEEEC-----CcCHH-------HHHHHHHHhCCCCCEEEEEeCCHH
Confidence 9987888899999972 23332 789999999999999999987643
No 122
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.31 E-value=3.8e-12 Score=128.54 Aligned_cols=113 Identities=13% Similarity=0.085 Sum_probs=83.8
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhc-------CCCCcEEEEeecCC-CC--CCCCccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR-------DRSDMRWRVMDMTS-MQ--FMDETFD 136 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~-------~~~~i~~~~~D~~~-l~--~~~~sFD 136 (659)
++.+|||||||+|.++..|+.. +..+|+|||+|+.+++.++++... ...++.++++|+.+ ++ +++++||
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 5679999999999999999987 346899999999999988765432 34689999999987 56 7789999
Q ss_pred EEEecccccccCCcccchH-HHHHHHHHHHhccccCeEEEEEEcC
Q 006149 137 VILDKGGLDALMEPELGHK-LGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 137 vVi~~g~l~~l~~~~~~~~-~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
.|+....-.+......... ....+++++.++|||||.+++.+..
T Consensus 126 ~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 126 KMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp EEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 9986433222110000000 0147999999999999999998865
No 123
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.31 E-value=5.2e-12 Score=126.86 Aligned_cols=138 Identities=14% Similarity=0.105 Sum_probs=101.7
Q ss_pred CCCCHhhHHHHHhhcCCCCccc--cccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCH
Q 006149 24 DFTSKENWDKFFTIRGIGDSFE--WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSK 101 (659)
Q Consensus 24 ~f~~~eyWd~~y~~~~~~~~fe--wy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~ 101 (659)
.|....+|+..|... ...+. .....+.+...+.+.+.. .++.+|||+|||+|.++..+++.+..+|+++|+++
T Consensus 50 ~f~~~~~~~~~y~~~--~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~ 124 (235)
T 1jg1_A 50 LSVEDKYKKYAHIDE--PLPIPAGQTVSAPHMVAIMLEIANL---KPGMNILEVGTGSGWNAALISEIVKTDVYTIERIP 124 (235)
T ss_dssp GGSCGGGGGGTTSSS--CEECSTTCEECCHHHHHHHHHHHTC---CTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCH
T ss_pred hhCCchhhhcCccCC--CcccCCCceeccHHHHHHHHHhcCC---CCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCH
Confidence 456666777766544 12221 122234556666777754 57789999999999999999987425999999999
Q ss_pred HHHHHHHHHhhcCC-CCcEEEEeecCCCCCCCC-cccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 102 VVISDMLRRNVRDR-SDMRWRVMDMTSMQFMDE-TFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 102 ~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~~~~-sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
.+++.++++....+ .++.+.++|+ ..++++. .||+|++..+++++. .++.++|+|||++++...
T Consensus 125 ~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~Ii~~~~~~~~~-------------~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 125 ELVEFAKRNLERAGVKNVHVILGDG-SKGFPPKAPYDVIIVTAGAPKIP-------------EPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEESCG-GGCCGGGCCEEEEEECSBBSSCC-------------HHHHHTEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCCcEEEECCc-ccCCCCCCCccEEEECCcHHHHH-------------HHHHHhcCCCcEEEEEEe
Confidence 99999887765443 5699999998 3355444 599999998887652 367899999999999886
Q ss_pred C
Q 006149 180 A 180 (659)
Q Consensus 180 ~ 180 (659)
.
T Consensus 191 ~ 191 (235)
T 1jg1_A 191 S 191 (235)
T ss_dssp S
T ss_pred c
Confidence 4
No 124
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.30 E-value=1.2e-11 Score=132.00 Aligned_cols=115 Identities=17% Similarity=0.129 Sum_probs=92.9
Q ss_pred HHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCC
Q 006149 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQF 130 (659)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~ 130 (659)
+...+.+.+.. .++.+|||+|||+|.++..+++.|..+|+|+|+|+ +++.++++....+ ++++++++|+.++++
T Consensus 38 y~~~i~~~l~~---~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~ 113 (348)
T 2y1w_A 38 YQRAILQNHTD---FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL 113 (348)
T ss_dssp HHHHHHHTGGG---TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC
T ss_pred HHHHHHhcccc---CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCC
Confidence 33445555443 46789999999999999999998877999999997 7777776665444 579999999999876
Q ss_pred CCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEE
Q 006149 131 MDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCL 177 (659)
Q Consensus 131 ~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~ 177 (659)
+ ++||+|++.++++++.... ....+.++.++|||||++++.
T Consensus 114 ~-~~~D~Ivs~~~~~~~~~~~-----~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 114 P-EQVDIIISEPMGYMLFNER-----MLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp S-SCEEEEEECCCBTTBTTTS-----HHHHHHHGGGGEEEEEEEESC
T ss_pred C-CceeEEEEeCchhcCChHH-----HHHHHHHHHhhcCCCeEEEEe
Confidence 5 6899999998888876544 557888999999999999854
No 125
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.30 E-value=8.3e-12 Score=125.85 Aligned_cols=101 Identities=16% Similarity=0.078 Sum_probs=83.3
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCCC---CCcccEEEecc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQFM---DETFDVILDKG 142 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~~---~~sFDvVi~~g 142 (659)
++.+|||+|||+|..+..++.. +..+|+++|+|+.+++.+++.....+ .+++++++|+.+++++ +++||+|++..
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARA 149 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEEC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEec
Confidence 5689999999999999999864 33589999999999998877655433 4799999999887754 57999999866
Q ss_pred cccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 143 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 143 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
. .+ ...+++.+.++|+|||++++...
T Consensus 150 ~----~~-------~~~~l~~~~~~LkpgG~l~~~~g 175 (240)
T 1xdz_A 150 V----AR-------LSVLSELCLPLVKKNGLFVALKA 175 (240)
T ss_dssp C----SC-------HHHHHHHHGGGEEEEEEEEEEEC
T ss_pred c----CC-------HHHHHHHHHHhcCCCCEEEEEeC
Confidence 2 22 45899999999999999998753
No 126
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.30 E-value=1.3e-11 Score=121.62 Aligned_cols=128 Identities=21% Similarity=0.359 Sum_probs=94.0
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEecccccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~ 146 (659)
.++.+|||+|||+|.++..++ .+|+++|+|+. ++.++++|+.++++++++||+|++..++++
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~--------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 127 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR----NPVHCFDLASL--------------DPRVTVCDMAQVPLEDESVDVAVFCLSLMG 127 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS--------------STTEEESCTTSCSCCTTCEEEEEEESCCCS
T ss_pred CCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC--------------CceEEEeccccCCCCCCCEeEEEEehhccc
Confidence 356899999999999998773 48999999985 578999999999988899999999999973
Q ss_pred cCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCchh-hcchhhhh-ccCceEEEeeeCCCCCCCCCCccEEEEEEecC
Q 006149 147 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHV-LGLLFPKF-RFGWKMSVHAIPQKSSSEPSLQTFMVVADKEN 224 (659)
Q Consensus 147 l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~~-~~~l~~~~-~~~w~~~~~~i~~~~~~~~~l~~f~~v~~k~~ 224 (659)
.+ ...+++++.++|+|||++++.++..... ...+...+ ..+|.+...... .-..+.++++|..
T Consensus 128 -~~-------~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~-------~~~~~~~~~~k~~ 192 (215)
T 2zfu_A 128 -TN-------IRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDLT-------NSHFFLFDFQKTG 192 (215)
T ss_dssp -SC-------HHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEEECC-------STTCEEEEEEECS
T ss_pred -cC-------HHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEEecC-------CCeEEEEEEEecC
Confidence 32 4599999999999999999998764321 12233333 336655443221 1234677777765
Q ss_pred Ccc
Q 006149 225 SSV 227 (659)
Q Consensus 225 ~~~ 227 (659)
...
T Consensus 193 ~~~ 195 (215)
T 2zfu_A 193 PPL 195 (215)
T ss_dssp SCS
T ss_pred ccc
Confidence 444
No 127
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.30 E-value=3.3e-11 Score=122.94 Aligned_cols=122 Identities=15% Similarity=0.066 Sum_probs=92.0
Q ss_pred HHHHhhCCCCCC-CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCC--C
Q 006149 56 PLISLIGAPTSS-PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ--F 130 (659)
Q Consensus 56 ~l~~~l~~~~~~-~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~--~ 130 (659)
.+..++.. . ++.+|||+|||+|.++..+++.+..+|+|+|+++.+++.+++.....+ .+++++++|+.+++ +
T Consensus 39 ll~~~~~~---~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~ 115 (259)
T 3lpm_A 39 LLAKFSYL---PIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLI 115 (259)
T ss_dssp HHHHHCCC---CSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTS
T ss_pred HHHHHhcC---CCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhh
Confidence 34455543 4 678999999999999999998866699999999999998877765544 36999999999875 5
Q ss_pred CCCcccEEEeccccccc-----CCcc--------cchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 131 MDETFDVILDKGGLDAL-----MEPE--------LGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 131 ~~~sFDvVi~~g~l~~l-----~~~~--------~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
++++||+|+++..+... .++. ........++..+.++|+|||+++++...
T Consensus 116 ~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 178 (259)
T 3lpm_A 116 PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP 178 (259)
T ss_dssp CTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH
Confidence 57899999997665433 1110 00122568999999999999999997643
No 128
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.30 E-value=1.2e-11 Score=130.91 Aligned_cols=104 Identities=17% Similarity=0.151 Sum_probs=86.6
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCcccEEEeccccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGLD 145 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~ 145 (659)
++.+|||+|||+|.++..+++.|..+|+|+|+| .+++.++++....+ .+++++++|+.++++++++||+|++....+
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~ 116 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGY 116 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBT
T ss_pred CCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchh
Confidence 568999999999999999999887799999999 58888877765544 569999999999988888999999986655
Q ss_pred ccCCcccchHHHHHHHHHHHhccccCeEEEE
Q 006149 146 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVC 176 (659)
Q Consensus 146 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi 176 (659)
.+.... ....++.++.++|+|||+++.
T Consensus 117 ~l~~~~----~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 117 FLLYES----MMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TBSTTC----CHHHHHHHHHHHEEEEEEEES
T ss_pred hcccHH----HHHHHHHHHHhhcCCCeEEEE
Confidence 543322 156889999999999999973
No 129
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.30 E-value=7.6e-12 Score=134.72 Aligned_cols=116 Identities=16% Similarity=0.118 Sum_probs=90.1
Q ss_pred HHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhh-------c-C--CCCcEEEEe
Q 006149 55 DPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNV-------R-D--RSDMRWRVM 123 (659)
Q Consensus 55 ~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~-------~-~--~~~i~~~~~ 123 (659)
..+.+.+.. .++.+|||||||+|.++..++.. +...|+|||+++.+++.+++... . . ..+++++++
T Consensus 163 ~~il~~l~l---~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~G 239 (438)
T 3uwp_A 163 AQMIDEIKM---TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERG 239 (438)
T ss_dssp HHHHHHHCC---CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEEC
T ss_pred HHHHHhcCC---CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEEC
Confidence 344455543 68899999999999999999865 66579999999999887765321 1 1 257999999
Q ss_pred ecCCCCCCC--CcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 124 DMTSMQFMD--ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 124 D~~~l~~~~--~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
|+.++++++ ..||+|+++.++.. ++ ....|.+++++|||||+|++.+...
T Consensus 240 D~~~lp~~d~~~~aDVVf~Nn~~F~---pd-----l~~aL~Ei~RvLKPGGrIVssE~f~ 291 (438)
T 3uwp_A 240 DFLSEEWRERIANTSVIFVNNFAFG---PE-----VDHQLKERFANMKEGGRIVSSKPFA 291 (438)
T ss_dssp CTTSHHHHHHHHTCSEEEECCTTCC---HH-----HHHHHHHHHTTSCTTCEEEESSCSS
T ss_pred cccCCccccccCCccEEEEcccccC---ch-----HHHHHHHHHHcCCCCcEEEEeeccc
Confidence 999988754 47999999876532 22 5688899999999999999987653
No 130
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.29 E-value=6.7e-12 Score=120.44 Aligned_cols=124 Identities=15% Similarity=0.150 Sum_probs=93.8
Q ss_pred hhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCC
Q 006149 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS 127 (659)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~ 127 (659)
...+...+..++.. ..++.+|||+|||+|.++..++..+..+|+++|+++.+++.+++.....+ ++++++++|+.+
T Consensus 28 ~~~~~~~~~~~l~~--~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 105 (187)
T 2fhp_A 28 TDKVKESIFNMIGP--YFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANR 105 (187)
T ss_dssp CHHHHHHHHHHHCS--CCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred HHHHHHHHHHHHHh--hcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHH
Confidence 34555566666642 13578999999999999999988876799999999999998877665443 469999999987
Q ss_pred CC----CCCCcccEEEecccccccCCcccchHHHHHHHHHH--HhccccCeEEEEEEcCCch
Q 006149 128 MQ----FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEV--KRLLKSGGKFVCLTLAESH 183 (659)
Q Consensus 128 l~----~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei--~rvLkpGG~lvi~~~~~~~ 183 (659)
.. +++++||+|++...++. .. ....+..+ .++|+|||++++.......
T Consensus 106 ~~~~~~~~~~~fD~i~~~~~~~~-~~-------~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 106 ALEQFYEEKLQFDLVLLDPPYAK-QE-------IVSQLEKMLERQLLTNEAVIVCETDKTVK 159 (187)
T ss_dssp HHHHHHHTTCCEEEEEECCCGGG-CC-------HHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred HHHHHHhcCCCCCEEEECCCCCc-hh-------HHHHHHHHHHhcccCCCCEEEEEeCCccc
Confidence 42 23678999998877442 22 23666666 8999999999988766433
No 131
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.29 E-value=6e-12 Score=123.75 Aligned_cols=119 Identities=10% Similarity=0.079 Sum_probs=90.4
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCC-CC
Q 006149 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTS-MQ 129 (659)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~-l~ 129 (659)
.+...+..++... .++.+|||+|||+|.++..++..+..+|+++|+|+.+++.++++....+ .+++++++|+.+ ++
T Consensus 40 ~~~~~l~~~l~~~--~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~ 117 (202)
T 2fpo_A 40 RVRETLFNWLAPV--IVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLA 117 (202)
T ss_dssp HHHHHHHHHHHHH--HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHS
T ss_pred HHHHHHHHHHHhh--cCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHh
Confidence 3444455554320 1468999999999999999888876799999999999999887765544 589999999987 45
Q ss_pred CCCCcccEEEecccccccCCcccchHHHHHHHHHHHh--ccccCeEEEEEEcC
Q 006149 130 FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKR--LLKSGGKFVCLTLA 180 (659)
Q Consensus 130 ~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~r--vLkpGG~lvi~~~~ 180 (659)
..+++||+|++...++ ... ...+++.+.+ +|+|||++++....
T Consensus 118 ~~~~~fD~V~~~~p~~-~~~-------~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 118 QKGTPHNIVFVDPPFR-RGL-------LEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp SCCCCEEEEEECCSSS-TTT-------HHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred hcCCCCCEEEECCCCC-CCc-------HHHHHHHHHhcCccCCCcEEEEEECC
Confidence 5667999999876643 211 3467777765 69999999988765
No 132
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.29 E-value=1.5e-11 Score=125.27 Aligned_cols=102 Identities=14% Similarity=-0.007 Sum_probs=84.5
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCCC---CCcccEEEec
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQFM---DETFDVILDK 141 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~~---~~sFDvVi~~ 141 (659)
.++.+|||+|||+|..+..|+.. +..+|+++|+|+.+++.+++.....+ .+++++++|+.+++.. +++||+|++.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 45789999999999999999876 44699999999999998877765444 4699999999987643 4799999986
Q ss_pred ccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 142 GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 142 g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
.+. + ...+++.+.++|||||++++...
T Consensus 159 a~~----~-------~~~ll~~~~~~LkpgG~l~~~~g 185 (249)
T 3g89_A 159 AVA----P-------LCVLSELLLPFLEVGGAAVAMKG 185 (249)
T ss_dssp SSC----C-------HHHHHHHHGGGEEEEEEEEEEEC
T ss_pred CcC----C-------HHHHHHHHHHHcCCCeEEEEEeC
Confidence 432 2 45899999999999999998774
No 133
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.29 E-value=1.5e-11 Score=115.82 Aligned_cols=107 Identities=16% Similarity=0.165 Sum_probs=85.6
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CC-CeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCC--------CCCCccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDA-GF-HGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ--------FMDETFD 136 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~-g~-~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~--------~~~~sFD 136 (659)
.++.+|||+|||+|.++..+++. +. .+++++|+++ +++ .+++.++++|+.+.+ +++++||
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~---------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D 90 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP---------IVGVDFLQGDFRDELVMKALLERVGDSKVQ 90 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC---------CTTEEEEESCTTSHHHHHHHHHHHTTCCEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc---------cCcEEEEEcccccchhhhhhhccCCCCcee
Confidence 46789999999999999999887 43 6999999999 653 167999999999876 7778999
Q ss_pred EEEecccccccCCcccchH----HHHHHHHHHHhccccCeEEEEEEcCCch
Q 006149 137 VILDKGGLDALMEPELGHK----LGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (659)
Q Consensus 137 vVi~~g~l~~l~~~~~~~~----~~~~~l~ei~rvLkpGG~lvi~~~~~~~ 183 (659)
+|++...+++......... ....+++++.++|+|||.+++.++..+.
T Consensus 91 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 141 (180)
T 1ej0_A 91 VVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEG 141 (180)
T ss_dssp EEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTT
T ss_pred EEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCc
Confidence 9999988887654321100 1268999999999999999998876443
No 134
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.29 E-value=2.2e-11 Score=118.57 Aligned_cols=106 Identities=14% Similarity=0.201 Sum_probs=81.2
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-C--CCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCC--------------
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDA-G--FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ-------------- 129 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~-g--~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~-------------- 129 (659)
.++.+|||+|||+|.++..+++. + ..+|+|+|+|+. ...+++.++++|+.+.+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~----------~~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~ 90 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIM----------DPIPNVYFIQGEIGKDNMNNIKNINYIDNMN 90 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCC----------CCCTTCEEEECCTTTTSSCCC----------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCcc----------CCCCCceEEEccccchhhhhhcccccccccc
Confidence 46789999999999999999886 3 358999999982 12357999999999876
Q ss_pred -----------CCCCcccEEEecccccccCCcccch----HHHHHHHHHHHhccccCeEEEEEEcCCc
Q 006149 130 -----------FMDETFDVILDKGGLDALMEPELGH----KLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (659)
Q Consensus 130 -----------~~~~sFDvVi~~g~l~~l~~~~~~~----~~~~~~l~ei~rvLkpGG~lvi~~~~~~ 182 (659)
+++++||+|++.+++++......+. .....++.++.++|||||.+++..+..+
T Consensus 91 ~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 158 (201)
T 2plw_A 91 NNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGS 158 (201)
T ss_dssp -CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST
T ss_pred chhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCC
Confidence 5678999999988777642211000 1134589999999999999999776543
No 135
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.28 E-value=1e-12 Score=143.44 Aligned_cols=116 Identities=17% Similarity=0.191 Sum_probs=88.7
Q ss_pred HHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCC
Q 006149 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMD 132 (659)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~ 132 (659)
+...+.+.+.. .++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++.. ......+...+...+++++
T Consensus 95 ~~~~l~~~~~~---~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~~~-~~~~~~~~~~~~~~l~~~~ 169 (416)
T 4e2x_A 95 LARDFLATELT---GPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREKGI-RVRTDFFEKATADDVRRTE 169 (416)
T ss_dssp HHHHHHHTTTC---SSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTTTC-CEECSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHhCC---CCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHcCC-CcceeeechhhHhhcccCC
Confidence 33344444432 5678999999999999999999887 99999999999987754410 0011123345555666778
Q ss_pred CcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 133 ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 133 ~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
++||+|++.++++|+.++ ..++++++++|||||++++.+..
T Consensus 170 ~~fD~I~~~~vl~h~~d~-------~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 170 GPANVIYAANTLCHIPYV-------QSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp CCEEEEEEESCGGGCTTH-------HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCEEEEEECChHHhcCCH-------HHHHHHHHHHcCCCeEEEEEeCC
Confidence 999999999999999754 49999999999999999998754
No 136
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.28 E-value=4e-12 Score=120.04 Aligned_cols=121 Identities=16% Similarity=0.177 Sum_probs=89.6
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCC-C-
Q 006149 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM-Q- 129 (659)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l-~- 129 (659)
.+...+..++... ..++.+|||+|||+|.++..++..+. +|+++|+|+.+++.++++....+.+++++++|+.+. +
T Consensus 26 ~~~~~~~~~~~~~-~~~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~ 103 (171)
T 1ws6_A 26 RLRKALFDYLRLR-YPRRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPE 103 (171)
T ss_dssp HHHHHHHHHHHHH-CTTCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHH
T ss_pred HHHHHHHHHHHhh-ccCCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHh
Confidence 4444455554310 01568999999999999999999887 599999999999988776654444899999999874 2
Q ss_pred CC--CCcccEEEecccccccCCcccchHHHHHHHHHHH--hccccCeEEEEEEcCCch
Q 006149 130 FM--DETFDVILDKGGLDALMEPELGHKLGNQYLSEVK--RLLKSGGKFVCLTLAESH 183 (659)
Q Consensus 130 ~~--~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~--rvLkpGG~lvi~~~~~~~ 183 (659)
++ .++||+|++...++ ...+ .+++.+. ++|+|||++++.+.....
T Consensus 104 ~~~~~~~~D~i~~~~~~~--~~~~-------~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 104 AKAQGERFTVAFMAPPYA--MDLA-------ALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp HHHTTCCEEEEEECCCTT--SCTT-------HHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred hhccCCceEEEEECCCCc--hhHH-------HHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 21 24899999987765 2222 5566666 999999999998876443
No 137
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.28 E-value=3.8e-11 Score=124.58 Aligned_cols=116 Identities=21% Similarity=0.313 Sum_probs=87.4
Q ss_pred chHHHHHHHHHHhhhhhhhhhccccCCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCC----CC
Q 006149 515 ASSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT----QD 590 (659)
Q Consensus 515 ~~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~----~d 590 (659)
.+.||++|.+ ++++. ++.+.+||+||+|+|.+++.+.++.|..++++|||||.|+++|+++|... ++
T Consensus 61 e~~Y~e~l~~-~~l~~--------~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~ 131 (283)
T 2i7c_A 61 EFAYHEMMTH-VPMTV--------SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYED 131 (283)
T ss_dssp HHHHHHHHHH-HHHTT--------SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGS
T ss_pred hhhHHHHHHH-HHHhc--------CCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCC
Confidence 4679886654 55543 25678999999999999999999888889999999999999999999642 24
Q ss_pred CCeeEE-----------------------------ecccchhHHHHHHHhhccCCCCcEEEecC---c--hHH-HHHHHh
Q 006149 591 KSLKVF-----------------------------NHLFCLQLEEDVNLVLFGLSSESCIKDNS---F--PEA-AVQLGK 635 (659)
Q Consensus 591 ~rl~vf-----------------------------~~l~~~~f~~~~~~~Lf~~~~~g~~~~n~---~--~~~-~~~l~~ 635 (659)
+|+++. .++++.+|++.++++| +++|+++.|. + ... ...++.
T Consensus 132 ~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L---~pgG~lv~~~~~~~~~~~~~~~~~~~ 208 (283)
T 2i7c_A 132 KRVNVFIEDASKFLENVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNAL---KPNGYCVAQCESLWIHVGTIKNMIGY 208 (283)
T ss_dssp TTEEEEESCHHHHHHHCCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHE---EEEEEEEEECCCTTTCHHHHHHHHHH
T ss_pred CcEEEEECChHHHHHhCCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhc---CCCcEEEEECCCcccCHHHHHHHHHH
Confidence 555222 2356789999999999 9999999884 2 122 234445
Q ss_pred hcc-CCcc
Q 006149 636 LVK-FQHL 642 (659)
Q Consensus 636 ~~~-f~~~ 642 (659)
+.+ |++.
T Consensus 209 l~~~F~~v 216 (283)
T 2i7c_A 209 AKKLFKKV 216 (283)
T ss_dssp HHTTCSEE
T ss_pred HHHHCCce
Confidence 544 7754
No 138
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.28 E-value=4.8e-12 Score=132.10 Aligned_cols=117 Identities=21% Similarity=0.314 Sum_probs=87.5
Q ss_pred chHHHHHHHHHHhhhhhhhhhccccCCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCC-----C
Q 006149 515 ASSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-----Q 589 (659)
Q Consensus 515 ~~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~-----~ 589 (659)
.+.||++|++ ++++. +++|++||+||+|+|++++.+.++.|..+|++|||||.|+++|+++|... .
T Consensus 66 e~~Y~e~l~~-~~l~~--------~~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~ 136 (294)
T 3adn_A 66 EFIYHEMMTH-VPLLA--------HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYD 136 (294)
T ss_dssp HHHHHHHHHH-HHHHH--------STTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTT
T ss_pred hhHHHHHHHH-HHHhc--------CCCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhccccccc
Confidence 4789998876 33433 26789999999999999999999888889999999999999999998532 3
Q ss_pred CCCe------------------eEE-----------ecccchhHHHHHHHhhccCCCCcEEEecC---c---hHHHHHHH
Q 006149 590 DKSL------------------KVF-----------NHLFCLQLEEDVNLVLFGLSSESCIKDNS---F---PEAAVQLG 634 (659)
Q Consensus 590 d~rl------------------~vf-----------~~l~~~~f~~~~~~~Lf~~~~~g~~~~n~---~---~~~~~~l~ 634 (659)
++|+ |+. .+|++.+|++.++++| +|+|+++.|+ + ......++
T Consensus 137 ~~rv~~~~~D~~~~l~~~~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~L---kpgG~lv~~~~s~~~~~~~~~~~~~ 213 (294)
T 3adn_A 137 DPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCL---NPGGIFVAQNGVCFLQQEEAIDSHR 213 (294)
T ss_dssp CTTCCEECSCSCC---CCCCCEEEEEECC----------CCHHHHHHHHHTE---EEEEEEEEEEEECSSCCHHHHHHHH
T ss_pred CCceEEEEChHHHHHhhcCCCccEEEECCCCccCcchhccHHHHHHHHHHhc---CCCCEEEEecCCcccchHHHHHHHH
Confidence 4455 222 2467899999999999 9999999986 2 22333444
Q ss_pred hhcc-CCccc
Q 006149 635 KLVK-FQHLE 643 (659)
Q Consensus 635 ~~~~-f~~~~ 643 (659)
.+.+ |++..
T Consensus 214 ~l~~~F~~v~ 223 (294)
T 3adn_A 214 KLSHYFSDVG 223 (294)
T ss_dssp HHHHHCSEEE
T ss_pred HHHHHCCCeE
Confidence 4444 77643
No 139
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.27 E-value=2.3e-11 Score=128.30 Aligned_cols=107 Identities=15% Similarity=0.159 Sum_probs=90.5
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCcccEEEecccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGL 144 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDvVi~~g~l 144 (659)
+..+|||+|||+|.++..+++. +..+++++|++ .+++.++++....+ .+++++++|+.+.+++++ ||+|++..++
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~~l 242 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVLLPNFL 242 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEEEESCG
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEEEcchh
Confidence 5689999999999999999887 23499999999 99998877764433 469999999998777644 9999999999
Q ss_pred cccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
+++.+++ ..++++++.++|+|||++++.+...
T Consensus 243 ~~~~~~~-----~~~~l~~~~~~L~pgG~l~i~e~~~ 274 (335)
T 2r3s_A 243 HHFDVAT-----CEQLLRKIKTALAVEGKVIVFDFIP 274 (335)
T ss_dssp GGSCHHH-----HHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred ccCCHHH-----HHHHHHHHHHhCCCCcEEEEEeecC
Confidence 9985443 6799999999999999999998753
No 140
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.27 E-value=1.8e-11 Score=131.40 Aligned_cols=106 Identities=16% Similarity=0.148 Sum_probs=90.8
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCC--CCCCCcccEEEecc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM--QFMDETFDVILDKG 142 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l--~~~~~sFDvVi~~g 142 (659)
...+|||||||+|.++..+++. +..+++++|+ +.+++.++++....+ ++++++.+|+.+. |++ ++||+|++..
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~ 256 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMSQ 256 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEES
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEec
Confidence 4679999999999999999886 2358999999 999998887765544 5799999999986 466 7899999999
Q ss_pred cccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 143 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 143 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+++++.+++ ..++|++++++|+|||++++.+..
T Consensus 257 vlh~~~~~~-----~~~~l~~~~~~L~pgG~l~i~e~~ 289 (363)
T 3dp7_A 257 FLDCFSEEE-----VISILTRVAQSIGKDSKVYIMETL 289 (363)
T ss_dssp CSTTSCHHH-----HHHHHHHHHHHCCTTCEEEEEECC
T ss_pred hhhhCCHHH-----HHHHHHHHHHhcCCCcEEEEEeec
Confidence 999886554 568999999999999999998864
No 141
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.27 E-value=6.7e-11 Score=126.42 Aligned_cols=160 Identities=18% Similarity=0.164 Sum_probs=111.8
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcC--CCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCC
Q 006149 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG--FHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSM 128 (659)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g--~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l 128 (659)
.+...+..++.. .++.+|||+|||+|.++..++..+ ..+|+|+|+++.+++.+++.....+ .++++.++|+.++
T Consensus 190 ~la~~l~~~~~~---~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~ 266 (354)
T 3tma_A 190 VLAQALLRLADA---RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHL 266 (354)
T ss_dssp HHHHHHHHHTTC---CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGG
T ss_pred HHHHHHHHHhCC---CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhC
Confidence 344555566554 567899999999999999998864 3589999999999999887765544 3799999999999
Q ss_pred CCCCCcccEEEecccccccCCcc-cchHHHHHHHHHHHhccccCeEEEEEEcCCchhhcchhhhhccCceEEEeeeCCCC
Q 006149 129 QFMDETFDVILDKGGLDALMEPE-LGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKMSVHAIPQKS 207 (659)
Q Consensus 129 ~~~~~sFDvVi~~g~l~~l~~~~-~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~~~~~l~~~~~~~w~~~~~~i~~~~ 207 (659)
+.+.+.||+|+++..+....... ........+++++.++|+|||++++++.....+ +.+.. .+|...-.... .
T Consensus 267 ~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~~~-~~~~~---~g~~~~~~~~l--~ 340 (354)
T 3tma_A 267 PRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPALL-KRALP---PGFALRHARVV--E 340 (354)
T ss_dssp GGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHHHH-HHHCC---TTEEEEEEEEC--C
T ss_pred ccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHHHH-HHHhh---cCcEEEEEEEE--E
Confidence 87778899999977655432211 112235789999999999999999998753222 22222 35544332221 1
Q ss_pred CCCCCCccEEEEEEe
Q 006149 208 SSEPSLQTFMVVADK 222 (659)
Q Consensus 208 ~~~~~l~~f~~v~~k 222 (659)
...+..++++++|
T Consensus 341 --~g~l~~~i~vl~r 353 (354)
T 3tma_A 341 --QGGVYPRVFVLEK 353 (354)
T ss_dssp --BTTBCCEEEEEEE
T ss_pred --eCCEEEEEEEEEc
Confidence 2246667777765
No 142
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.26 E-value=2.7e-11 Score=130.69 Aligned_cols=124 Identities=14% Similarity=0.157 Sum_probs=94.5
Q ss_pred HHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcC-CCeEEEEcCCHHHHHHHHHHhhcCC----CCcEEEEeecCCC
Q 006149 54 RDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR----SDMRWRVMDMTSM 128 (659)
Q Consensus 54 ~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g-~~~VtgvD~S~~~i~~~~~~~~~~~----~~i~~~~~D~~~l 128 (659)
...+.+.+.. .++.+|||+|||+|.++..+++.+ ..+|+++|+|+.+++.++++....+ .++.++++|+.+
T Consensus 211 ~~~ll~~l~~---~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~- 286 (375)
T 4dcm_A 211 ARFFMQHLPE---NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS- 286 (375)
T ss_dssp HHHHHHTCCC---SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-
T ss_pred HHHHHHhCcc---cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-
Confidence 3456666654 456899999999999999999884 4699999999999999887765443 258889999988
Q ss_pred CCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCch
Q 006149 129 QFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (659)
Q Consensus 129 ~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~ 183 (659)
++++++||+|+++..+++..... ......+++++.++|+|||+++++......
T Consensus 287 ~~~~~~fD~Ii~nppfh~~~~~~--~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~ 339 (375)
T 4dcm_A 287 GVEPFRFNAVLCNPPFHQQHALT--DNVAWEMFHHARRCLKINGELYIVANRHLD 339 (375)
T ss_dssp TCCTTCEEEEEECCCC---------CCHHHHHHHHHHHHEEEEEEEEEEEETTSC
T ss_pred cCCCCCeeEEEECCCcccCcccC--HHHHHHHHHHHHHhCCCCcEEEEEEECCcC
Confidence 56778999999998887532211 112557899999999999999998765433
No 143
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.26 E-value=3.5e-11 Score=121.16 Aligned_cols=120 Identities=18% Similarity=0.186 Sum_probs=88.7
Q ss_pred hhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc-C-CCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCC
Q 006149 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTS 127 (659)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~-g-~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~ 127 (659)
...+...+...+......++.+|||+|||+|..+..+++. + .+.|+|+|+|+.+++.+.+.+. ...++.++++|+..
T Consensus 58 ~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~-~r~nv~~i~~Da~~ 136 (232)
T 3id6_C 58 RSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQ-RRPNIFPLLADARF 136 (232)
T ss_dssp TCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHH-HCTTEEEEECCTTC
T ss_pred HHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhh-hcCCeEEEEccccc
Confidence 3345556666665444578999999999999999999886 3 4699999999999876655543 34789999999987
Q ss_pred CC---CCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 128 MQ---FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 128 l~---~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
.. ...++||+|++..+. ++ ....+...+.++|||||+|++...
T Consensus 137 ~~~~~~~~~~~D~I~~d~a~-----~~----~~~il~~~~~~~LkpGG~lvisik 182 (232)
T 3id6_C 137 PQSYKSVVENVDVLYVDIAQ-----PD----QTDIAIYNAKFFLKVNGDMLLVIK 182 (232)
T ss_dssp GGGTTTTCCCEEEEEECCCC-----TT----HHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred chhhhccccceEEEEecCCC-----hh----HHHHHHHHHHHhCCCCeEEEEEEc
Confidence 43 124689999987543 11 123445667779999999998753
No 144
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.26 E-value=4.4e-11 Score=119.07 Aligned_cols=123 Identities=18% Similarity=0.262 Sum_probs=90.9
Q ss_pred cccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc-C-CCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEe
Q 006149 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVM 123 (659)
Q Consensus 46 wy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~-g-~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~ 123 (659)
|......+...+...+......++.+|||+|||+|.++..+++. | ..+|+++|+|+.+++.+.+..... ++++++++
T Consensus 51 ~~p~~~~~~~~i~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-~~v~~~~~ 129 (227)
T 1g8a_A 51 WNPNRSKLGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-RNIVPILG 129 (227)
T ss_dssp CCTTTCHHHHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-TTEEEEEC
T ss_pred eCCCchhHHHHHHhhHHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-CCCEEEEc
Confidence 44444455455544454333457889999999999999999976 4 369999999999999887766443 78999999
Q ss_pred ecCCCC---CCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEE
Q 006149 124 DMTSMQ---FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (659)
Q Consensus 124 D~~~l~---~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~ 178 (659)
|+.+.. ...++||+|++... .+. ....++.++.++|||||++++..
T Consensus 130 d~~~~~~~~~~~~~~D~v~~~~~-----~~~----~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 130 DATKPEEYRALVPKVDVIFEDVA-----QPT----QAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp CTTCGGGGTTTCCCEEEEEECCC-----STT----HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCcchhhcccCCceEEEECCC-----CHh----HHHHHHHHHHHhcCCCCEEEEEE
Confidence 998742 12368999996543 111 13355999999999999999874
No 145
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.26 E-value=1.6e-11 Score=129.23 Aligned_cols=99 Identities=12% Similarity=0.169 Sum_probs=79.1
Q ss_pred chHHHHHHHHHHhhhhhhhhhccccCCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCC-----CC
Q 006149 515 ASSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-----TQ 589 (659)
Q Consensus 515 ~~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl-----~~ 589 (659)
.+.||++|++ ++++. ++.+.+||+||+|+|.+++.+.++.|..++++|||||.|+++|+++|.. -+
T Consensus 60 e~~Y~e~l~~-~~l~~--------~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~ 130 (314)
T 1uir_A 60 EYIYHETLVH-PAMLT--------HPEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFD 130 (314)
T ss_dssp HHHHHHHHHH-HHHHH--------SSCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGG
T ss_pred hhHHHHHHHH-HHHhc--------CCCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcccccc
Confidence 4689999886 34433 2567899999999999999999988888999999999999999999852 12
Q ss_pred CCCeeEE-----------------------e---------cccchhHHHHHHHhhccCCCCcEEEecC
Q 006149 590 DKSLKVF-----------------------N---------HLFCLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 590 d~rl~vf-----------------------~---------~l~~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
++|+++. . +|++.+|++.++++| +|+|+++.|.
T Consensus 131 ~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~L---kpgG~lv~~~ 195 (314)
T 1uir_A 131 DPRAVLVIDDARAYLERTEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHL---NPGGVMGMQT 195 (314)
T ss_dssp CTTEEEEESCHHHHHHHCCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTE---EEEEEEEEEE
T ss_pred CCceEEEEchHHHHHHhcCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhc---CCCcEEEEEc
Confidence 4555222 1 134689999999999 9999999885
No 146
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.25 E-value=1.5e-11 Score=121.66 Aligned_cols=104 Identities=10% Similarity=0.112 Sum_probs=80.7
Q ss_pred CCCCeEEEECCCcchHHHHHHHcC-CCeEEEEcCCHHHHHHHHHHhhc-----CCCCcEEEEeecCCCCCCCCcccEEEe
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVR-----DRSDMRWRVMDMTSMQFMDETFDVILD 140 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g-~~~VtgvD~S~~~i~~~~~~~~~-----~~~~i~~~~~D~~~l~~~~~sFDvVi~ 140 (659)
.++.+|||+|||+|.++..|++.. ..+|+|+|+|+.+++.+.+.+.. ..+++.++++|+.++++++++ |.|+.
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~ 104 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHV 104 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEE
Confidence 467899999999999999999883 35999999999988865433322 225899999999999987777 77763
Q ss_pred cc---cc--cccCCcccchHHHHHHHHHHHhccccCeEEEEEE
Q 006149 141 KG---GL--DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (659)
Q Consensus 141 ~g---~l--~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~ 178 (659)
.. .+ +++.++. .+++++.++|||||++++..
T Consensus 105 ~~~~~~~~~~~~~~~~-------~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 105 LMPWGSLLRGVLGSSP-------EMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp ESCCHHHHHHHHTSSS-------HHHHHHHHTEEEEEEEEEEE
T ss_pred EccchhhhhhhhccHH-------HHHHHHHHHcCCCcEEEEEe
Confidence 22 22 1444433 89999999999999999854
No 147
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.24 E-value=3.4e-11 Score=127.32 Aligned_cols=107 Identities=15% Similarity=0.045 Sum_probs=90.6
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCcccEEEeccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGG 143 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDvVi~~g~ 143 (659)
.+..+|||+|||+|..+..+++. +..+++++|+ +.+++.++++....+ +++++..+|+. .+++. +||+|++..+
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~v 244 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAV 244 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESC
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehh
Confidence 34689999999999999999886 3358999999 999998887765543 67999999998 45554 8999999999
Q ss_pred ccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 144 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 144 l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
++++.+++ ..+++++++++|+|||++++.+...
T Consensus 245 lh~~~~~~-----~~~~l~~~~~~L~pgG~l~i~e~~~ 277 (332)
T 3i53_A 245 LHDWDDLS-----AVAILRRCAEAAGSGGVVLVIEAVA 277 (332)
T ss_dssp GGGSCHHH-----HHHHHHHHHHHHTTTCEEEEEECCC
T ss_pred hccCCHHH-----HHHHHHHHHHhcCCCCEEEEEeecC
Confidence 99987654 5699999999999999999998653
No 148
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.24 E-value=4.6e-12 Score=144.05 Aligned_cols=107 Identities=19% Similarity=0.219 Sum_probs=88.7
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCC--CCCCCcccEEEecccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSM--QFMDETFDVILDKGGL 144 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l--~~~~~sFDvVi~~g~l 144 (659)
.+.+|||||||.|.++..|++.|. +|||||.|+.+|+.|+..+...+ .++.|.++++.++ ++++++||+|+|..++
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ 144 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVF 144 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCH
T ss_pred CCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcch
Confidence 357999999999999999999997 99999999999999988776655 5799999999987 5667899999999999
Q ss_pred cccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+|+.++.. -..+..+.+.|+++|..++....
T Consensus 145 ehv~~~~~-----~~~~~~~~~tl~~~~~~~~~~~~ 175 (569)
T 4azs_A 145 HHIVHLHG-----IDEVKRLLSRLADVTQAVILELA 175 (569)
T ss_dssp HHHHHHHC-----HHHHHHHHHHHHHHSSEEEEECC
T ss_pred hcCCCHHH-----HHHHHHHHHHhccccceeeEEec
Confidence 99976541 23344577788888877666543
No 149
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.23 E-value=3.4e-11 Score=123.74 Aligned_cols=118 Identities=19% Similarity=0.263 Sum_probs=94.3
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc-C-CCeEEEEcCCHHHHHHHHHHhhcC----CCCcEEEEee
Q 006149 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRD----RSDMRWRVMD 124 (659)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~-g-~~~VtgvD~S~~~i~~~~~~~~~~----~~~i~~~~~D 124 (659)
+.....+...+.. .++.+|||+|||+|.++..++.. + ..+|+++|+++.+++.+++..... ..++.++++|
T Consensus 85 ~~~~~~i~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d 161 (280)
T 1i9g_A 85 PKDAAQIVHEGDI---FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSD 161 (280)
T ss_dssp HHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSC
T ss_pred HHHHHHHHHHcCC---CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECc
Confidence 3344455555554 57889999999999999999985 3 469999999999999888776543 3689999999
Q ss_pred cCCCCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCch
Q 006149 125 MTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (659)
Q Consensus 125 ~~~l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~ 183 (659)
+.+.++++++||+|++. +.++. .++.++.++|+|||++++.+.....
T Consensus 162 ~~~~~~~~~~~D~v~~~-----~~~~~-------~~l~~~~~~L~pgG~l~~~~~~~~~ 208 (280)
T 1i9g_A 162 LADSELPDGSVDRAVLD-----MLAPW-------EVLDAVSRLLVAGGVLMVYVATVTQ 208 (280)
T ss_dssp GGGCCCCTTCEEEEEEE-----SSCGG-------GGHHHHHHHEEEEEEEEEEESSHHH
T ss_pred hHhcCCCCCceeEEEEC-----CcCHH-------HHHHHHHHhCCCCCEEEEEeCCHHH
Confidence 99988878899999973 23333 7899999999999999999876433
No 150
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.23 E-value=2.8e-11 Score=121.44 Aligned_cols=115 Identities=15% Similarity=0.130 Sum_probs=89.2
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcC-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCC
Q 006149 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM 128 (659)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g-~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l 128 (659)
.....+..++.. .++.+|||+|||+|..+..++... ..+|+++|+++.+++.++++....+ ++++++++|+.+.
T Consensus 58 ~~~~~l~~~~~~---~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 134 (232)
T 3ntv_A 58 LTLDLIKQLIRM---NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQ 134 (232)
T ss_dssp HHHHHHHHHHHH---HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC
T ss_pred HHHHHHHHHHhh---cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH
Confidence 344445555443 357899999999999999999852 4699999999999999988776554 4799999999875
Q ss_pred -C-CCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 129 -Q-FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 129 -~-~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
+ ..+++||+|++...... ...+++++.++|+|||++++...
T Consensus 135 ~~~~~~~~fD~V~~~~~~~~----------~~~~l~~~~~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 135 FENVNDKVYDMIFIDAAKAQ----------SKKFFEIYTPLLKHQGLVITDNV 177 (232)
T ss_dssp HHHHTTSCEEEEEEETTSSS----------HHHHHHHHGGGEEEEEEEEEECT
T ss_pred HHhhccCCccEEEEcCcHHH----------HHHHHHHHHHhcCCCeEEEEeeC
Confidence 3 33689999996543221 45899999999999999988543
No 151
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.23 E-value=1.7e-11 Score=130.61 Aligned_cols=121 Identities=18% Similarity=0.180 Sum_probs=96.3
Q ss_pred HHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCC-CeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCC
Q 006149 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFM 131 (659)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~-~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~ 131 (659)
....+.+.+.. .++.+|||+|||+|.++..+++.+. .+|+++|+|+.+++.++++....+..+.++++|+.+.+
T Consensus 184 ~~~~ll~~l~~---~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~-- 258 (343)
T 2pjd_A 184 GSQLLLSTLTP---HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV-- 258 (343)
T ss_dssp HHHHHHHHSCT---TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC--
T ss_pred HHHHHHHhcCc---CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc--
Confidence 34556666643 3567999999999999999998864 48999999999999998887666666788999987754
Q ss_pred CCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 132 DETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 132 ~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+++||+|+++..+++.... .......+++++.++|||||.++++...
T Consensus 259 ~~~fD~Iv~~~~~~~g~~~--~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 259 KGRFDMIISNPPFHDGMQT--SLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp CSCEEEEEECCCCCSSSHH--HHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred cCCeeEEEECCCcccCccC--CHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 6799999999888753210 1123679999999999999999998765
No 152
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.23 E-value=3.7e-11 Score=123.75 Aligned_cols=102 Identities=17% Similarity=0.236 Sum_probs=85.8
Q ss_pred CCCCeEEEECCCcchHHHHHHHc--CCCeEEEEcCCHHHHHHHHHHhhcC-C-CCcEEEEeecCCCCCCCCcccEEEecc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRD-R-SDMRWRVMDMTSMQFMDETFDVILDKG 142 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~--g~~~VtgvD~S~~~i~~~~~~~~~~-~-~~i~~~~~D~~~l~~~~~sFDvVi~~g 142 (659)
.++.+|||+|||+|.++..+++. +..+|+++|+++.+++.+++..... + +++.++++|+.+ ++++++||+|++
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~-- 185 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYDAVIA-- 185 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEEEEEE--
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCccEEEE--
Confidence 57789999999999999999986 2359999999999999988776554 3 679999999988 666789999997
Q ss_pred cccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 143 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 143 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
++.++. .+++++.++|+|||++++.+...
T Consensus 186 ---~~~~~~-------~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 186 ---DIPDPW-------NHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp ---CCSCGG-------GSHHHHHHTEEEEEEEEEEESSH
T ss_pred ---cCcCHH-------HHHHHHHHHcCCCCEEEEEeCCH
Confidence 233333 78999999999999999998764
No 153
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.22 E-value=8.9e-11 Score=123.61 Aligned_cols=99 Identities=15% Similarity=0.236 Sum_probs=74.8
Q ss_pred chHHHHHHHHHHhhhhhhhhhccccCCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCC----CC
Q 006149 515 ASSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT----QD 590 (659)
Q Consensus 515 ~~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~----~d 590 (659)
.+.||++|++ ++++. ++.+.+||+||+|.|.+++.+.++.|..+|++|||||.|+++|+++|... .+
T Consensus 91 e~~Y~e~l~~-l~l~~--------~~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~ 161 (314)
T 2b2c_A 91 EFSYQEMLAH-LPMFA--------HPDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSH 161 (314)
T ss_dssp SSHHHHHHHH-HHHHH--------SSSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGC
T ss_pred hhHHHHHHHH-HHHhh--------CCCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCC
Confidence 4679986654 55433 25678999999999999999999888889999999999999999999532 24
Q ss_pred CCeeEE-----------------------------ecccchhHHHHHHHhhccCCCCcEEEecC
Q 006149 591 KSLKVF-----------------------------NHLFCLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 591 ~rl~vf-----------------------------~~l~~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
+|+++. .++++.+|++.++++| +|+|+++.|.
T Consensus 162 ~rv~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~L---kpgG~lv~~~ 222 (314)
T 2b2c_A 162 PKLDLFCGDGFEFLKNHKNEFDVIITDSSDPVGPAESLFGQSYYELLRDAL---KEDGILSSQG 222 (314)
T ss_dssp TTEEEECSCHHHHHHHCTTCEEEEEECCC-------------HHHHHHHHE---EEEEEEEEEC
T ss_pred CCEEEEEChHHHHHHhcCCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhc---CCCeEEEEEC
Confidence 555222 1356689999999999 9999999865
No 154
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.22 E-value=9.5e-11 Score=114.44 Aligned_cols=106 Identities=13% Similarity=0.234 Sum_probs=79.8
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCC-------C----Ccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFM-------D----ETF 135 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~-------~----~sF 135 (659)
.++.+|||+|||+|.++..+++.+ ..|+|+|+++. ...++++++++|+.+.+.. . ++|
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~~-~~V~gvD~~~~----------~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 92 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSLA-RKIISIDLQEM----------EEIAGVRFIRCDIFKETIFDDIDRALREEGIEKV 92 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTTC-SEEEEEESSCC----------CCCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSE
T ss_pred CCCCEEEEEeecCCHHHHHHHHcC-CcEEEEecccc----------ccCCCeEEEEccccCHHHHHHHHHHhhcccCCcc
Confidence 468899999999999999999884 59999999982 1236899999999986521 1 489
Q ss_pred cEEEecccccccCCccc----chHHHHHHHHHHHhccccCeEEEEEEcCCch
Q 006149 136 DVILDKGGLDALMEPEL----GHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (659)
Q Consensus 136 DvVi~~g~l~~l~~~~~----~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~ 183 (659)
|+|++.+.......... .......++..+.++|||||.|++..+..+.
T Consensus 93 D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~ 144 (191)
T 3dou_A 93 DDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDM 144 (191)
T ss_dssp EEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTH
T ss_pred eEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCC
Confidence 99999765443221110 0122568899999999999999998876444
No 155
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.22 E-value=4.3e-11 Score=122.02 Aligned_cols=103 Identities=16% Similarity=0.181 Sum_probs=86.1
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEecccccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~ 146 (659)
.++.+|||+|||+|.++..+++.|. +|+++|+++.+++.++++....+..+++.++|+.+. +++++||+|+++...+.
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~-~~~~~fD~Vv~n~~~~~ 196 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-LPFGPFDLLVANLYAEL 196 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-GGGCCEEEEEEECCHHH
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc-CcCCCCCEEEECCcHHH
Confidence 3678999999999999999999887 999999999999988877655543489999998773 45678999998755443
Q ss_pred cCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 147 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 147 l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
...++.++.++|+|||++++.....
T Consensus 197 ----------~~~~l~~~~~~LkpgG~lils~~~~ 221 (254)
T 2nxc_A 197 ----------HAALAPRYREALVPGGRALLTGILK 221 (254)
T ss_dssp ----------HHHHHHHHHHHEEEEEEEEEEEEEG
T ss_pred ----------HHHHHHHHHHHcCCCCEEEEEeecc
Confidence 4589999999999999999987653
No 156
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.21 E-value=8.4e-11 Score=125.72 Aligned_cols=107 Identities=15% Similarity=0.116 Sum_probs=90.4
Q ss_pred CCCCeEEEECCCcchHHHHHHHcC-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCcccEEEeccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGG 143 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g-~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDvVi~~g~ 143 (659)
.+..+|||+|||+|.++..+++.. ..+++++|+ +.+++.++++....+ .+++++.+|+.+.++++ +|+|++..+
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~--~D~v~~~~v 265 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPE--ADAVLFCRI 265 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCC--CSEEEEESC
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCC--CCEEEEech
Confidence 467899999999999999998873 358999999 999998887765543 45999999999887664 399999999
Q ss_pred ccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 144 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 144 l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
++++.+.. ..+++++++++|+|||++++.+...
T Consensus 266 lh~~~d~~-----~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 266 LYSANEQL-----STIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp GGGSCHHH-----HHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred hccCCHHH-----HHHHHHHHHHhcCCCCEEEEEeccc
Confidence 99886533 5699999999999999999988653
No 157
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.21 E-value=6.6e-12 Score=122.82 Aligned_cols=125 Identities=16% Similarity=0.157 Sum_probs=75.5
Q ss_pred HHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcC-CCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCC
Q 006149 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFM 131 (659)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g-~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~ 131 (659)
+...+.+.+.. ..++.+|||+|||+|.++..+++.+ ..+|+++|+|+.+++.++++....+.+++++++|+.+ +++
T Consensus 17 ~~~~~~~~l~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~ 93 (215)
T 4dzr_A 17 LVEEAIRFLKR--MPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-WLI 93 (215)
T ss_dssp HHHHHHHHHTT--CCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHH-HHH
T ss_pred HHHHHHHHhhh--cCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-hhh
Confidence 33445555532 1367899999999999999999884 2489999999999998876654444478899999988 555
Q ss_pred C-----CcccEEEecccccccCCcc-------------------cchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 132 D-----ETFDVILDKGGLDALMEPE-------------------LGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 132 ~-----~sFDvVi~~g~l~~l~~~~-------------------~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+ ++||+|+++..++...... .+......+++++.++|||||+++++...
T Consensus 94 ~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 94 ERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp HHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred hhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 5 8999999975554322110 01111278999999999999996665544
No 158
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.21 E-value=1.7e-10 Score=118.03 Aligned_cols=161 Identities=14% Similarity=0.151 Sum_probs=104.6
Q ss_pred HHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcC-CCeEEEEcCCHHHHHHHHHHhhc---CC--CCcEEEEeecCCC--
Q 006149 57 LISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVR---DR--SDMRWRVMDMTSM-- 128 (659)
Q Consensus 57 l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g-~~~VtgvD~S~~~i~~~~~~~~~---~~--~~i~~~~~D~~~l-- 128 (659)
+..++.. .++.+|||+|||+|.++..++... ..+|+++|+++.+++.+++.... .+ .+++++++|+.+.
T Consensus 28 L~~~~~~---~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~ 104 (260)
T 2ozv_A 28 LASLVAD---DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAK 104 (260)
T ss_dssp HHHTCCC---CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHH
T ss_pred HHHHhcc---cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhh
Confidence 4455543 467899999999999999999884 35899999999999988776654 33 2599999999987
Q ss_pred -----CCCCCcccEEEecccccccCC---cc--------cchHHHHHHHHHHHhccccCeEEEEEEcCCchhhcchhhhh
Q 006149 129 -----QFMDETFDVILDKGGLDALME---PE--------LGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKF 192 (659)
Q Consensus 129 -----~~~~~sFDvVi~~g~l~~l~~---~~--------~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~~~~~l~~~~ 192 (659)
++++++||+|+++..+..... ++ ........+++.+.++|+|||+++++.... ....+...+
T Consensus 105 ~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~--~~~~~~~~l 182 (260)
T 2ozv_A 105 ARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ--SVAEIIAAC 182 (260)
T ss_dssp HHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG--GHHHHHHHH
T ss_pred hhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH--HHHHHHHHH
Confidence 256789999999854443210 00 000015689999999999999999876542 223344444
Q ss_pred ccCce-EEEeeeCCCCCCCCCCccEEEEEEecC
Q 006149 193 RFGWK-MSVHAIPQKSSSEPSLQTFMVVADKEN 224 (659)
Q Consensus 193 ~~~w~-~~~~~i~~~~~~~~~l~~f~~v~~k~~ 224 (659)
...|. .++..+.... ......+.+.+.|..
T Consensus 183 ~~~~~~~~i~~v~~~~--~~~~~~~lv~~~k~~ 213 (260)
T 2ozv_A 183 GSRFGGLEITLIHPRP--GEDAVRMLVTAIKGS 213 (260)
T ss_dssp TTTEEEEEEEEEESST--TSCCCEEEEEEEETC
T ss_pred HhcCCceEEEEEcCCC--CCCceEEEEEEEeCC
Confidence 33332 3333332221 222334666666643
No 159
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.21 E-value=7.1e-11 Score=122.37 Aligned_cols=98 Identities=19% Similarity=0.250 Sum_probs=77.5
Q ss_pred chHHHHHHHHHHhhhhhhhhhccccCCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc----CCC--
Q 006149 515 ASSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF----GFT-- 588 (659)
Q Consensus 515 ~~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F----gl~-- 588 (659)
.+.||++|++ ++++. .+.+.+||.||+|+|.++..+.++ |..++++|||||.|+++|+++| ++.
T Consensus 58 ~~~y~e~l~~-~~l~~--------~~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~ 127 (281)
T 1mjf_A 58 ERSYHEPLVH-PAMLA--------HPKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEA 127 (281)
T ss_dssp THHHHHHHHH-HHHHH--------SSCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHH
T ss_pred chHHHHHHHH-HHHhh--------CCCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccc
Confidence 4679998875 33332 256789999999999999999998 8889999999999999999999 431
Q ss_pred ----CCCCeeEE----------------------------ecccchhHHHHHHHhhccCCCCcEEEecC
Q 006149 589 ----QDKSLKVF----------------------------NHLFCLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 589 ----~d~rl~vf----------------------------~~l~~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
.++|+++. .++++.+|++.++++| +|+|+++.|.
T Consensus 128 ~~~~~~~~v~~~~~D~~~~l~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L---~pgG~lv~~~ 193 (281)
T 1mjf_A 128 MLNGKHEKAKLTIGDGFEFIKNNRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDAL---NNPGIYVTQA 193 (281)
T ss_dssp HHTTCCSSEEEEESCHHHHHHHCCCEEEEEEECCCCC-----TTSHHHHHHHHHHE---EEEEEEEEEE
T ss_pred cccCCCCcEEEEECchHHHhcccCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhc---CCCcEEEEEc
Confidence 34455221 2345789999999999 9999999874
No 160
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.21 E-value=1e-10 Score=125.78 Aligned_cols=106 Identities=16% Similarity=0.039 Sum_probs=90.3
Q ss_pred CCCCeEEEECCCcchHHHHHHHcC-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCcccEEEeccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGG 143 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g-~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDvVi~~g~ 143 (659)
.+..+|||+|||+|.++..+++.. ..+++++|+ +.+++.++++....+ ++++++.+|+. .+++. .||+|++..+
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~v 277 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-GADVYLIKHV 277 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-SCSEEEEESC
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-CceEEEhhhh
Confidence 457899999999999999998872 358999999 999998887765543 67999999998 46665 8999999999
Q ss_pred ccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 144 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 144 l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
++++.++. ..+++++++++|+|||++++.+..
T Consensus 278 lh~~~d~~-----~~~~L~~~~~~L~pgG~l~i~e~~ 309 (369)
T 3gwz_A 278 LHDWDDDD-----VVRILRRIATAMKPDSRLLVIDNL 309 (369)
T ss_dssp GGGSCHHH-----HHHHHHHHHTTCCTTCEEEEEEEB
T ss_pred hccCCHHH-----HHHHHHHHHHHcCCCCEEEEEEec
Confidence 99886544 568999999999999999998865
No 161
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.21 E-value=5.7e-11 Score=116.21 Aligned_cols=101 Identities=13% Similarity=0.050 Sum_probs=83.4
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCCCCCcccEEEeccccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQFMDETFDVILDKGGLD 145 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~ 145 (659)
++.+|||+|||+|..+..++.. +..+|+++|+|+.+++.+++.....+ .+++++++|+.+.+ +.++||+|++.+.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~~-- 141 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRAF-- 141 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSCS--
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEecc--
Confidence 3679999999999999999886 34599999999999998877765544 45999999999876 4578999997542
Q ss_pred ccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 146 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 146 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
.+ ...++.++.++|+|||++++....
T Consensus 142 --~~-------~~~~l~~~~~~L~~gG~l~~~~~~ 167 (207)
T 1jsx_A 142 --AS-------LNDMVSWCHHLPGEQGRFYALKGQ 167 (207)
T ss_dssp --SS-------HHHHHHHHTTSEEEEEEEEEEESS
T ss_pred --CC-------HHHHHHHHHHhcCCCcEEEEEeCC
Confidence 11 458999999999999999998643
No 162
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.21 E-value=1.4e-11 Score=132.23 Aligned_cols=97 Identities=18% Similarity=0.221 Sum_probs=78.4
Q ss_pred CCCeEEEECCC------cchHHHHHHHc--CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCC------CC
Q 006149 68 PPPQILVPGCG------NSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFM------DE 133 (659)
Q Consensus 68 ~~~~ILDiGCG------~G~~s~~La~~--g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~------~~ 133 (659)
++.+||||||| +|..+..++.. +..+|+|+|+|+.+. ...++++|+++|+.++++. ++
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~~~~rI~fv~GDa~dlpf~~~l~~~d~ 287 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------VDELRIRTIQGDQNDAEFLDRIARRYG 287 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------GCBTTEEEEECCTTCHHHHHHHHHHHC
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------hcCCCcEEEEecccccchhhhhhcccC
Confidence 46899999999 77777777654 346999999999752 2347899999999998877 78
Q ss_pred cccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 134 TFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 134 sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+||+|++.++ ++..+ ..++|++++++|||||+|++.++.
T Consensus 288 sFDlVisdgs-H~~~d-------~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 288 PFDIVIDDGS-HINAH-------VRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp CEEEEEECSC-CCHHH-------HHHHHHHHGGGEEEEEEEEEECGG
T ss_pred CccEEEECCc-ccchh-------HHHHHHHHHHhcCCCeEEEEEecc
Confidence 9999999764 33221 568999999999999999999875
No 163
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.21 E-value=5.7e-11 Score=120.32 Aligned_cols=114 Identities=19% Similarity=0.268 Sum_probs=91.3
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc-C-CCeEEEEcCCHHHHHHHHHHhhcCC-C-CcEEEEeecCC
Q 006149 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR-S-DMRWRVMDMTS 127 (659)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~-g-~~~VtgvD~S~~~i~~~~~~~~~~~-~-~i~~~~~D~~~ 127 (659)
.....+...+.. .++.+|||+|||+|.++..+++. + ..+|+++|+++.+++.+++.....+ + +++++++|+.+
T Consensus 80 ~~~~~i~~~~~~---~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 156 (255)
T 3mb5_A 80 KDAALIVAYAGI---SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE 156 (255)
T ss_dssp HHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG
T ss_pred hHHHHHHHhhCC---CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhh
Confidence 344456666654 57889999999999999999987 4 4699999999999998887765433 3 49999999987
Q ss_pred CCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 128 MQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 128 l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
. +++++||+|++. ..++. .+++++.++|+|||++++.....
T Consensus 157 ~-~~~~~~D~v~~~-----~~~~~-------~~l~~~~~~L~~gG~l~~~~~~~ 197 (255)
T 3mb5_A 157 G-IEEENVDHVILD-----LPQPE-------RVVEHAAKALKPGGFFVAYTPCS 197 (255)
T ss_dssp C-CCCCSEEEEEEC-----SSCGG-------GGHHHHHHHEEEEEEEEEEESSH
T ss_pred c-cCCCCcCEEEEC-----CCCHH-------HHHHHHHHHcCCCCEEEEEECCH
Confidence 4 677889999973 23332 78999999999999999988653
No 164
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.20 E-value=5.7e-11 Score=118.07 Aligned_cols=114 Identities=16% Similarity=0.179 Sum_probs=89.7
Q ss_pred HHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc-CC-CeEEEEcCCHHHHHHHHHHhhcC------CCCcEEEEee
Q 006149 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GF-HGITNVDFSKVVISDMLRRNVRD------RSDMRWRVMD 124 (659)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~-g~-~~VtgvD~S~~~i~~~~~~~~~~------~~~i~~~~~D 124 (659)
....+...+.. ...++.+|||+|||+|..+..+++. +. .+|+++|+++.+++.++++.... ..++.++++|
T Consensus 63 ~~~~~l~~l~~-~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 141 (226)
T 1i1n_A 63 MHAYALELLFD-QLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGD 141 (226)
T ss_dssp HHHHHHHHTTT-TSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESC
T ss_pred HHHHHHHHHHh-hCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECC
Confidence 34445555541 1256789999999999999999886 43 59999999999999887766442 3579999999
Q ss_pred cCCCCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 125 MTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 125 ~~~l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+...+..+++||+|++...+.++ +.++.++|||||++++....
T Consensus 142 ~~~~~~~~~~fD~i~~~~~~~~~-------------~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 142 GRMGYAEEAPYDAIHVGAAAPVV-------------PQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp GGGCCGGGCCEEEEEECSBBSSC-------------CHHHHHTEEEEEEEEEEESC
T ss_pred cccCcccCCCcCEEEECCchHHH-------------HHHHHHhcCCCcEEEEEEec
Confidence 98766567889999988777654 46789999999999998754
No 165
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.20 E-value=4.6e-11 Score=118.86 Aligned_cols=115 Identities=14% Similarity=0.094 Sum_probs=90.5
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCC------CeEEEEcCCHHHHHHHHHHhhcC------CCCcE
Q 006149 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF------HGITNVDFSKVVISDMLRRNVRD------RSDMR 119 (659)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~------~~VtgvD~S~~~i~~~~~~~~~~------~~~i~ 119 (659)
.....+.+.+.. ...++.+|||+|||+|.++..+++... .+|+++|+++.+++.++++.... ..++.
T Consensus 65 ~~~~~~~~~l~~-~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~ 143 (227)
T 2pbf_A 65 HMHALSLKRLIN-VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFK 143 (227)
T ss_dssp HHHHHHHHHHTT-TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEE
T ss_pred HHHHHHHHHHHh-hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEE
Confidence 344455565531 124678999999999999999988742 48999999999999988776543 35799
Q ss_pred EEEeecCCCC----CCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 120 WRVMDMTSMQ----FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 120 ~~~~D~~~l~----~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
++++|+.+.. ...++||+|++...++++ +.++.++|+|||++++....
T Consensus 144 ~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~~-------------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 144 IIHKNIYQVNEEEKKELGLFDAIHVGASASEL-------------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp EEECCGGGCCHHHHHHHCCEEEEEECSBBSSC-------------CHHHHHHEEEEEEEEEEEEE
T ss_pred EEECChHhcccccCccCCCcCEEEECCchHHH-------------HHHHHHhcCCCcEEEEEEcc
Confidence 9999998865 556889999998887754 46788999999999988753
No 166
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.20 E-value=4.2e-11 Score=126.05 Aligned_cols=113 Identities=18% Similarity=0.144 Sum_probs=92.1
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCC--CeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCC
Q 006149 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF--HGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTS 127 (659)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~--~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~ 127 (659)
+.....+.+.+.. .++.+|||+|||+|.++..+++.+. .+|+++|+|+.+++.++++....+ .++.++++|+.+
T Consensus 61 ~~~~~~l~~~l~~---~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~ 137 (317)
T 1dl5_A 61 PSLMALFMEWVGL---DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYY 137 (317)
T ss_dssp HHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG
T ss_pred HHHHHHHHHhcCC---CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhh
Confidence 3455566666654 5788999999999999999998743 469999999999999887765544 569999999998
Q ss_pred CCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 128 MQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 128 l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
.+.++++||+|++.++++++. +.+.++|||||++++...
T Consensus 138 ~~~~~~~fD~Iv~~~~~~~~~-------------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 138 GVPEFSPYDVIFVTVGVDEVP-------------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp CCGGGCCEEEEEECSBBSCCC-------------HHHHHHEEEEEEEEEEBC
T ss_pred ccccCCCeEEEEEcCCHHHHH-------------HHHHHhcCCCcEEEEEEC
Confidence 655568999999999998763 467889999999999864
No 167
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.20 E-value=5.9e-11 Score=115.81 Aligned_cols=98 Identities=13% Similarity=0.172 Sum_probs=76.3
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEecccccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~ 146 (659)
.++.+|||+|||+|.++..++..+..+|+|+|+|+.+++.++++.. +++++++|+.+++ ++||+|++...+++
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~d~~~~~---~~~D~v~~~~p~~~ 122 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG----GVNFMVADVSEIS---GKYDTWIMNPPFGS 122 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT----TSEEEECCGGGCC---CCEEEEEECCCC--
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC----CCEEEECcHHHCC---CCeeEEEECCCchh
Confidence 3678999999999999999998877689999999999998866653 7999999999864 68999999999888
Q ss_pred cCCcccchHHHHHHHHHHHhccccCeEEEEEE
Q 006149 147 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (659)
Q Consensus 147 l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~ 178 (659)
..... ...+++++.++| |+.+++..
T Consensus 123 ~~~~~-----~~~~l~~~~~~~--g~~~~~~~ 147 (200)
T 1ne2_A 123 VVKHS-----DRAFIDKAFETS--MWIYSIGN 147 (200)
T ss_dssp ----------CHHHHHHHHHHE--EEEEEEEE
T ss_pred ccCch-----hHHHHHHHHHhc--CcEEEEEc
Confidence 75432 247889999988 55555444
No 168
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.20 E-value=2.1e-10 Score=112.27 Aligned_cols=121 Identities=11% Similarity=0.090 Sum_probs=89.7
Q ss_pred ccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecC
Q 006149 47 YAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMT 126 (659)
Q Consensus 47 y~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~ 126 (659)
|.....+...+...+......++.+|||+|||+|.++..++..+..+|+|+|+++.+++.++++....+.+++++++|+.
T Consensus 28 ~~~~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~ 107 (207)
T 1wy7_A 28 YRTPGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVS 107 (207)
T ss_dssp CCCCHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGG
T ss_pred ecCchHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchH
Confidence 33444444444444432112467899999999999999999987768999999999999887776544447999999999
Q ss_pred CCCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEE
Q 006149 127 SMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCL 177 (659)
Q Consensus 127 ~l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~ 177 (659)
+++ ++||+|++...++...... ...+++++.++| ||.+++.
T Consensus 108 ~~~---~~~D~v~~~~p~~~~~~~~-----~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 108 EFN---SRVDIVIMNPPFGSQRKHA-----DRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp GCC---CCCSEEEECCCCSSSSTTT-----THHHHHHHHHHC--SEEEEEE
T ss_pred HcC---CCCCEEEEcCCCccccCCc-----hHHHHHHHHHhc--CcEEEEE
Confidence 864 4899999988877654322 347888999988 6655444
No 169
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.20 E-value=4.4e-11 Score=133.03 Aligned_cols=103 Identities=18% Similarity=0.145 Sum_probs=86.5
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCcccEEEecccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGL 144 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDvVi~~g~l 144 (659)
.++.+|||+|||+|.++..+++.+..+|+|+|+|+ +++.+++.....+ .+++++++|+.+++++ ++||+|++...+
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~ 234 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMG 234 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCH
T ss_pred cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCch
Confidence 45789999999999999999988777999999998 8888877665544 5799999999998765 689999998887
Q ss_pred cccCCcccchHHHHHHHHHHHhccccCeEEEE
Q 006149 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVC 176 (659)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi 176 (659)
+++.... ....+.++.++|||||++++
T Consensus 235 ~~~~~e~-----~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 235 YMLFNER-----MLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HHHTCHH-----HHHHHHHGGGGEEEEEEEES
T ss_pred HhcCcHH-----HHHHHHHHHHhcCCCCEEEE
Confidence 7765443 45677889999999999984
No 170
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.19 E-value=3.2e-11 Score=124.23 Aligned_cols=122 Identities=17% Similarity=0.127 Sum_probs=90.2
Q ss_pred HHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCC
Q 006149 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQF 130 (659)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~ 130 (659)
+...+.+.+. .++.+|||+|||+|..+..++.. +..+|+++|+|+.+++.++++....+ ++++++++|+.+. +
T Consensus 98 l~~~~l~~~~----~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~-~ 172 (276)
T 2b3t_A 98 LVEQALARLP----EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA-L 172 (276)
T ss_dssp HHHHHHHHSC----SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG-G
T ss_pred HHHHHHHhcc----cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh-c
Confidence 4444445443 25679999999999999999865 44699999999999998877665433 4799999999874 4
Q ss_pred CCCcccEEEecccccccCC------------------cccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 131 MDETFDVILDKGGLDALME------------------PELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 131 ~~~sFDvVi~~g~l~~l~~------------------~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
++++||+|+++..+..... ..++......++.++.++|+|||++++...
T Consensus 173 ~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~ 239 (276)
T 2b3t_A 173 AGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG 239 (276)
T ss_dssp TTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred ccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 4678999999744332111 011113367899999999999999998753
No 171
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.19 E-value=7.7e-11 Score=126.38 Aligned_cols=105 Identities=20% Similarity=0.122 Sum_probs=88.6
Q ss_pred CCCCeEEEECCCcchHHHHHHHcC-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCcccEEEeccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGG 143 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g-~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDvVi~~g~ 143 (659)
.++.+|||+|||+|.++..+++.. ..+++++|+ +.+++.++++....+ .+++++++|+.+ +++. .||+|++..+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~v 257 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPV-TADVVLLSFV 257 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC-CEEEEEEESC
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCC-CCCEEEEecc
Confidence 467899999999999999998873 358999999 999999887765443 479999999986 4443 4999999999
Q ss_pred ccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 144 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 144 l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
++++.+.. ...+++++.++|+|||++++.+.
T Consensus 258 l~~~~~~~-----~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 258 LLNWSDED-----ALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp GGGSCHHH-----HHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccCCCHHH-----HHHHHHHHHHhcCCCcEEEEEec
Confidence 99876543 46899999999999999999887
No 172
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.19 E-value=5.2e-11 Score=119.03 Aligned_cols=102 Identities=9% Similarity=0.080 Sum_probs=82.1
Q ss_pred CCCeEEEECCCcchHHHHHHHc-C-CCeEEEEcCCHHHHHHHHHHhhcCC---CCcEEEEeecCCC--CCCCCcccEEEe
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR---SDMRWRVMDMTSM--QFMDETFDVILD 140 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g-~~~VtgvD~S~~~i~~~~~~~~~~~---~~i~~~~~D~~~l--~~~~~sFDvVi~ 140 (659)
++.+|||+|||+|..+..|++. + ..+|+++|+++.+++.+++.....+ .+++++++|+.+. .+++++||+|++
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 56 GSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFG 135 (221)
T ss_dssp TCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEE
T ss_pred CCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEE
Confidence 3459999999999999999985 2 4699999999999999988776544 3699999998775 244689999997
Q ss_pred cccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 141 KGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 141 ~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
...... ...+++++.++|||||++++.+.
T Consensus 136 d~~~~~----------~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 136 QVSPMD----------LKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp CCCTTT----------HHHHHHHHHHHEEEEEEEEETTT
T ss_pred cCcHHH----------HHHHHHHHHHHcCCCcEEEEeCC
Confidence 543221 45789999999999999998553
No 173
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.18 E-value=3.4e-11 Score=120.67 Aligned_cols=109 Identities=18% Similarity=0.114 Sum_probs=73.5
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCC-HHHHHHH---HHHhhcCC-CCcEEEEeecCCCCCC-CCcccEEEe
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFS-KVVISDM---LRRNVRDR-SDMRWRVMDMTSMQFM-DETFDVILD 140 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S-~~~i~~~---~~~~~~~~-~~i~~~~~D~~~l~~~-~~sFDvVi~ 140 (659)
++.+|||||||+|.++..|++. ...+|+|||+| +.|++.+ +++....+ +++.++++|+.++|.. .+.+|.|++
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~ 103 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISI 103 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEE
Confidence 6789999999999999999864 33589999999 7776654 44433333 6799999999998531 134444443
Q ss_pred cccccccCCcccchHHHHHHHHHHHhccccCeEEEEEE
Q 006149 141 KGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (659)
Q Consensus 141 ~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~ 178 (659)
........ .........++++++|+|||||++++..
T Consensus 104 ~~~~~~~~--~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 104 LFPWGTLL--EYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp ESCCHHHH--HHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred eCCCcHHh--hhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 32211100 0000001368999999999999999854
No 174
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.18 E-value=5e-10 Score=122.42 Aligned_cols=116 Identities=12% Similarity=0.047 Sum_probs=87.5
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHH-------HHHhhcCC---CCcEE
Q 006149 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDM-------LRRNVRDR---SDMRW 120 (659)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~-------~~~~~~~~---~~i~~ 120 (659)
.....+.+.+.. .++.+|||+|||+|.++..++.. +...|+|||+++.+++.+ +++....+ .++++
T Consensus 229 ~~v~~ml~~l~l---~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~ 305 (433)
T 1u2z_A 229 NFLSDVYQQCQL---KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEF 305 (433)
T ss_dssp HHHHHHHHHTTC---CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEE
T ss_pred HHHHHHHHhcCC---CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEE
Confidence 344445555543 57889999999999999999986 666899999999998877 55554443 68999
Q ss_pred EEeecCCC--CC--CCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEE
Q 006149 121 RVMDMTSM--QF--MDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (659)
Q Consensus 121 ~~~D~~~l--~~--~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~ 178 (659)
+++|.... ++ ..++||+|++..++. .++ ...+|.++.++|||||++++..
T Consensus 306 i~gD~~~~~~~~~~~~~~FDvIvvn~~l~---~~d-----~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 306 SLKKSFVDNNRVAELIPQCDVILVNNFLF---DED-----LNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp EESSCSTTCHHHHHHGGGCSEEEECCTTC---CHH-----HHHHHHHHHTTCCTTCEEEESS
T ss_pred EEcCccccccccccccCCCCEEEEeCccc---ccc-----HHHHHHHHHHhCCCCeEEEEee
Confidence 98865432 22 247899999876552 122 5588999999999999999985
No 175
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.18 E-value=7.9e-11 Score=119.19 Aligned_cols=108 Identities=19% Similarity=0.168 Sum_probs=83.2
Q ss_pred CCCeEEEECCCcchHHHHHHHcCC-CeEEEEcCCHHHHHHHHHHhhc---------CCCCcEEEEeecCC-CC--CCCCc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVR---------DRSDMRWRVMDMTS-MQ--FMDET 134 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~-~~VtgvD~S~~~i~~~~~~~~~---------~~~~i~~~~~D~~~-l~--~~~~s 134 (659)
++.+|||+|||+|.++..++..+. .+|+|||+|+.+++.++++... ...++.++++|+.+ ++ +++++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 567999999999999999998853 5899999999999988776543 23689999999987 55 77889
Q ss_pred ccEEEecccccccCCcccchH------HHHHHHHHHHhccccCeEEEEEEcC
Q 006149 135 FDVILDKGGLDALMEPELGHK------LGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 135 FDvVi~~g~l~~l~~~~~~~~------~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+|.|+... .++..... ....++.++.++|+|||++++.+..
T Consensus 129 ~d~v~~~~-----p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~ 175 (246)
T 2vdv_E 129 LSKMFFCF-----PDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDV 175 (246)
T ss_dssp EEEEEEES-----CCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cCEEEEEC-----CCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEecc
Confidence 99998432 22210000 0148999999999999999997754
No 176
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.17 E-value=8.3e-11 Score=119.37 Aligned_cols=103 Identities=11% Similarity=0.014 Sum_probs=82.8
Q ss_pred CCCeEEEECCCcchHHHHHHHc-C-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCC-CCC--CCcccEEEe
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM-QFM--DETFDVILD 140 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g-~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l-~~~--~~sFDvVi~ 140 (659)
++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.++++....+ .+++++++|+.+. +.. .++||+|++
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~ 142 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFI 142 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEE
Confidence 5689999999999999999987 2 4699999999999999988775544 4799999999773 322 348999997
Q ss_pred cccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 141 KGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 141 ~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
...... ...+++++.++|||||++++.+..
T Consensus 143 d~~~~~----------~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 143 DADKPN----------NPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp CSCGGG----------HHHHHHHHHHTCCTTCEEEEECCS
T ss_pred CCchHH----------HHHHHHHHHHhcCCCeEEEEeCCC
Confidence 543211 458999999999999999887654
No 177
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.17 E-value=3.5e-11 Score=119.62 Aligned_cols=118 Identities=9% Similarity=0.016 Sum_probs=87.6
Q ss_pred HHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc-C-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCC
Q 006149 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM 128 (659)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~-g-~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l 128 (659)
....+..++.. .++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.+++.....+ .+++++++|+.+.
T Consensus 46 ~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 122 (221)
T 3u81_A 46 KGQIMDAVIRE---YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDL 122 (221)
T ss_dssp HHHHHHHHHHH---HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred HHHHHHHHHHh---cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHH
Confidence 33344444432 35689999999999999999985 2 3599999999999999887765443 4699999998653
Q ss_pred -CC-C----CCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 129 -QF-M----DETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 129 -~~-~----~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
+. . .++||+|++.+..++... ...++..+ ++|||||++++.+...
T Consensus 123 l~~~~~~~~~~~fD~V~~d~~~~~~~~-------~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 123 IPQLKKKYDVDTLDMVFLDHWKDRYLP-------DTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp GGGTTTTSCCCCCSEEEECSCGGGHHH-------HHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred HHHHHHhcCCCceEEEEEcCCcccchH-------HHHHHHhc-cccCCCeEEEEeCCCC
Confidence 32 2 268999998776665422 23667777 9999999999877653
No 178
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.17 E-value=1.1e-10 Score=123.82 Aligned_cols=119 Identities=18% Similarity=0.241 Sum_probs=88.8
Q ss_pred hhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc-CC-CeEEEEcCCHHHHHHHHHHhhcC------------C
Q 006149 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GF-HGITNVDFSKVVISDMLRRNVRD------------R 115 (659)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~-g~-~~VtgvD~S~~~i~~~~~~~~~~------------~ 115 (659)
++.....+...+.. .++.+|||+|||+|.++..++.. |. .+|+++|+++.+++.+++..... .
T Consensus 90 ~~~~~~~~l~~l~~---~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~ 166 (336)
T 2b25_A 90 FPKDINMILSMMDI---NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWP 166 (336)
T ss_dssp CHHHHHHHHHHHTC---CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCC
T ss_pred CHHHHHHHHHhcCC---CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccC
Confidence 34444455666654 57889999999999999999987 54 69999999999999988766431 2
Q ss_pred CCcEEEEeecCCC--CCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCch
Q 006149 116 SDMRWRVMDMTSM--QFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (659)
Q Consensus 116 ~~i~~~~~D~~~l--~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~ 183 (659)
.+++++++|+.+. ++++++||+|++.. ..+. .++.++.++|+|||++++.......
T Consensus 167 ~~v~~~~~d~~~~~~~~~~~~fD~V~~~~-----~~~~-------~~l~~~~~~LkpgG~lv~~~~~~~~ 224 (336)
T 2b25_A 167 DNVDFIHKDISGATEDIKSLTFDAVALDM-----LNPH-------VTLPVFYPHLKHGGVCAVYVVNITQ 224 (336)
T ss_dssp CCEEEEESCTTCCC-------EEEEEECS-----SSTT-------TTHHHHGGGEEEEEEEEEEESSHHH
T ss_pred CceEEEECChHHcccccCCCCeeEEEECC-----CCHH-------HHHHHHHHhcCCCcEEEEEeCCHHH
Confidence 5799999999987 56677899999742 2222 4699999999999999988876443
No 179
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.16 E-value=7.7e-11 Score=126.74 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=84.1
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCcccEEEeccccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGLD 145 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~ 145 (659)
++.+|||||||+|.++..+++.|..+|+|||.|+ +++.+++....++ .+|+++++|+.++.++ ++||+|++...-+
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~ 160 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGY 160 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBT
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeecccc
Confidence 5789999999999999999999988999999996 6777766655544 5799999999999876 7899999876555
Q ss_pred ccCCcccchHHHHHHHHHHHhccccCeEEEE
Q 006149 146 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVC 176 (659)
Q Consensus 146 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi 176 (659)
.+.... .+..++....++|||||+++-
T Consensus 161 ~l~~e~----~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 161 GLLHES----MLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp TBTTTC----SHHHHHHHHHHHEEEEEEEES
T ss_pred cccccc----hhhhHHHHHHhhCCCCceECC
Confidence 444322 266889999999999998863
No 180
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.16 E-value=7.1e-11 Score=125.70 Aligned_cols=106 Identities=12% Similarity=0.146 Sum_probs=89.2
Q ss_pred CCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCC-CCCCcccEEEecccc
Q 006149 69 PPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ-FMDETFDVILDKGGL 144 (659)
Q Consensus 69 ~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~-~~~~sFDvVi~~g~l 144 (659)
+.+|||+|||+|.++..+++. +..+++++|+ +.+++.++++..... .+++++.+|+.+.+ +.++.||+|++..++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vl 258 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCL 258 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEeccc
Confidence 789999999999999999887 3358999999 779988877665433 46999999999875 234679999999999
Q ss_pred cccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+++.+.+ ...++++++++|+|||++++.+..
T Consensus 259 h~~~~~~-----~~~~l~~~~~~L~pgG~l~i~e~~ 289 (352)
T 3mcz_A 259 HYFDARE-----AREVIGHAAGLVKPGGALLILTMT 289 (352)
T ss_dssp GGSCHHH-----HHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ccCCHHH-----HHHHHHHHHHHcCCCCEEEEEEec
Confidence 9986543 579999999999999999999865
No 181
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.15 E-value=9e-11 Score=117.40 Aligned_cols=118 Identities=13% Similarity=0.118 Sum_probs=92.0
Q ss_pred chhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcC-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeec
Q 006149 49 EWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDM 125 (659)
Q Consensus 49 ~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g-~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~ 125 (659)
..+.....+..++.. .++.+|||+|||+|..+..++... ..+|+++|+++.+++.++++....+ .++.++++|+
T Consensus 38 ~~~~~~~~l~~~~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 114 (233)
T 2gpy_A 38 MDLLGMESLLHLLKM---AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDA 114 (233)
T ss_dssp CCHHHHHHHHHHHHH---HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCG
T ss_pred cCHHHHHHHHHHHhc---cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCH
Confidence 344455555555543 357899999999999999999873 3599999999999999887765544 4699999999
Q ss_pred CCC-CCC--CCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 126 TSM-QFM--DETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 126 ~~l-~~~--~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
.+. +.. +++||+|++...... ...+++.+.++|+|||++++.+.
T Consensus 115 ~~~~~~~~~~~~fD~I~~~~~~~~----------~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 115 LQLGEKLELYPLFDVLFIDAAKGQ----------YRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp GGSHHHHTTSCCEEEEEEEGGGSC----------HHHHHHHHGGGEEEEEEEEEETT
T ss_pred HHHHHhcccCCCccEEEECCCHHH----------HHHHHHHHHHHcCCCeEEEEEcC
Confidence 875 332 578999998665431 45899999999999999998754
No 182
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.15 E-value=8.7e-11 Score=119.00 Aligned_cols=113 Identities=14% Similarity=0.080 Sum_probs=84.8
Q ss_pred CCCeEEEECCCcchHHHHHHHc---CCCeEEEEcCCHHHHHHHHHHhhcC---CC--C----------------------
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA---GFHGITNVDFSKVVISDMLRRNVRD---RS--D---------------------- 117 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~---g~~~VtgvD~S~~~i~~~~~~~~~~---~~--~---------------------- 117 (659)
++.+|||+|||+|.++..++.. +..+|+|+|+|+.+++.+++..... +. +
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 5679999999999999999876 2248999999999999887655433 10 1
Q ss_pred ---cE-------------EEEeecCCCCC-----CCCcccEEEecccccccCCcc--cchHHHHHHHHHHHhccccCeEE
Q 006149 118 ---MR-------------WRVMDMTSMQF-----MDETFDVILDKGGLDALMEPE--LGHKLGNQYLSEVKRLLKSGGKF 174 (659)
Q Consensus 118 ---i~-------------~~~~D~~~l~~-----~~~sFDvVi~~g~l~~l~~~~--~~~~~~~~~l~ei~rvLkpGG~l 174 (659)
++ +.++|+.+... ...+||+|+++..+....... .+......+++++.++|+|||++
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 66 99999987431 345899999987665543321 11234679999999999999999
Q ss_pred EEEEcC
Q 006149 175 VCLTLA 180 (659)
Q Consensus 175 vi~~~~ 180 (659)
+++...
T Consensus 211 ~~~~~~ 216 (250)
T 1o9g_A 211 AVTDRS 216 (250)
T ss_dssp EEEESS
T ss_pred EEeCcc
Confidence 996554
No 183
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.15 E-value=3.2e-10 Score=113.94 Aligned_cols=111 Identities=14% Similarity=0.161 Sum_probs=89.1
Q ss_pred HHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCC
Q 006149 55 DPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMD 132 (659)
Q Consensus 55 ~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~ 132 (659)
..+...+.. .++.+|||+|||+|.++..+++. ..+|+++|+++.+++.+++.....+ +++.+..+|+.+..+++
T Consensus 81 ~~~~~~~~~---~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 156 (248)
T 2yvl_A 81 FYIALKLNL---NKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPE 156 (248)
T ss_dssp HHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCT
T ss_pred HHHHHhcCC---CCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCC
Confidence 345555543 57789999999999999999988 4599999999999998887765444 57999999998854366
Q ss_pred CcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 133 ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 133 ~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
++||+|++. ..++. .+++++.++|+|||++++.....
T Consensus 157 ~~~D~v~~~-----~~~~~-------~~l~~~~~~L~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 157 GIFHAAFVD-----VREPW-------HYLEKVHKSLMEGAPVGFLLPTA 193 (248)
T ss_dssp TCBSEEEEC-----SSCGG-------GGHHHHHHHBCTTCEEEEEESSH
T ss_pred CcccEEEEC-----CcCHH-------HHHHHHHHHcCCCCEEEEEeCCH
Confidence 789999973 22332 77999999999999999998753
No 184
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.15 E-value=2.8e-10 Score=110.17 Aligned_cols=107 Identities=23% Similarity=0.250 Sum_probs=80.1
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CC---------CeEEEEcCCHHHHHHHHHHhhcCCCCcEEE-EeecCCCC------
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDA-GF---------HGITNVDFSKVVISDMLRRNVRDRSDMRWR-VMDMTSMQ------ 129 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~-g~---------~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~-~~D~~~l~------ 129 (659)
.++.+|||+|||+|.++..+++. +. .+|+++|+|+.. ...+++++ ++|+.+.+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~----------~~~~~~~~~~~d~~~~~~~~~~~ 90 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF----------PLEGATFLCPADVTDPRTSQRIL 90 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC----------CCTTCEEECSCCTTSHHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc----------cCCCCeEEEeccCCCHHHHHHHH
Confidence 46789999999999999999987 53 589999999821 23568899 99987753
Q ss_pred --CCCCcccEEEecccccccCCcccc----hHHHHHHHHHHHhccccCeEEEEEEcCCch
Q 006149 130 --FMDETFDVILDKGGLDALMEPELG----HKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (659)
Q Consensus 130 --~~~~sFDvVi~~g~l~~l~~~~~~----~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~ 183 (659)
+++++||+|++.++++.......+ ......+++++.++|||||++++.++..+.
T Consensus 91 ~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 150 (196)
T 2nyu_A 91 EVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQ 150 (196)
T ss_dssp HHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGG
T ss_pred HhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCcc
Confidence 345689999997766543321101 011358899999999999999999876443
No 185
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.15 E-value=2.6e-10 Score=118.99 Aligned_cols=109 Identities=20% Similarity=0.238 Sum_probs=81.5
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhc------CCCCcEEEEeecCCC-CCCCCcccEEE
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR------DRSDMRWRVMDMTSM-QFMDETFDVIL 139 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~------~~~~i~~~~~D~~~l-~~~~~sFDvVi 139 (659)
++.+|||||||+|.++..+++. +..+|++||+++.+++.+++.... ..++++++++|+.+. ...+++||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 4679999999999999999987 457899999999999988776532 246899999998875 33468999999
Q ss_pred ecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 140 DKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 140 ~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
+........... -....+++.+.++|+|||++++...
T Consensus 163 ~D~~~p~~~~~~---l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 163 SDCTDPIGPGES---LFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp ECC-------------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ECCCCccCcchh---ccHHHHHHHHHHhcCCCCEEEEecC
Confidence 855432211110 0015899999999999999999763
No 186
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.15 E-value=1.6e-10 Score=123.32 Aligned_cols=106 Identities=11% Similarity=0.085 Sum_probs=88.5
Q ss_pred CCCCeEEEECCCcchHHHHHHHcC-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCcccEEEeccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGG 143 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g-~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDvVi~~g~ 143 (659)
.++.+|||+|||+|.++..+++.. ..+++++|+ +.+++.++++....+ .+++++++|+.+ +++. .||+|++..+
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~v 258 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR-KADAIILSFV 258 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-CEEEEEEESC
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-CccEEEEccc
Confidence 467899999999999999998874 358999999 999998887765443 479999999986 4443 4999999999
Q ss_pred ccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 144 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 144 l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
++++.+.+ ...+++++.++|+|||++++.+..
T Consensus 259 l~~~~~~~-----~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 259 LLNWPDHD-----AVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp GGGSCHHH-----HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ccCCCHHH-----HHHHHHHHHHhcCCCcEEEEEEEe
Confidence 99876543 468999999999999999999875
No 187
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.14 E-value=2.2e-10 Score=114.88 Aligned_cols=128 Identities=14% Similarity=0.062 Sum_probs=98.4
Q ss_pred CCCeEEEECCCcchHHHHHHHcCC-CeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCcccEEEecccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGL 144 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~-~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDvVi~~g~l 144 (659)
++.+|||+|||+|.++..++..+. .+|+++|+++.+++.+++.....+ .++++.++|..+...+++.||+|+..|..
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmG 100 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGMG 100 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEEC
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCCc
Confidence 578999999999999999999864 579999999999999987766555 46999999999876554579999876554
Q ss_pred cccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCchhhcchhhhhccCceEEEeeeCCC
Q 006149 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKMSVHAIPQK 206 (659)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~~~~~l~~~~~~~w~~~~~~i~~~ 206 (659)
..+ +..++..+.+.|+++|+|++............+. ..+|.+.-..+-.+
T Consensus 101 g~l---------I~~IL~~~~~~l~~~~~lIlqp~~~~~~lr~~L~--~~Gf~i~~E~lv~e 151 (230)
T 3lec_A 101 GRL---------IADILNNDIDKLQHVKTLVLQPNNREDDLRKWLA--ANDFEIVAEDILTE 151 (230)
T ss_dssp HHH---------HHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHH--HTTEEEEEEEEEEC
T ss_pred hHH---------HHHHHHHHHHHhCcCCEEEEECCCChHHHHHHHH--HCCCEEEEEEEEEE
Confidence 432 5688999999999999999988754332222222 34788776665433
No 188
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.14 E-value=9.9e-11 Score=116.74 Aligned_cols=115 Identities=15% Similarity=0.196 Sum_probs=89.7
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc-CC------CeEEEEcCCHHHHHHHHHHhhcC------CCC
Q 006149 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GF------HGITNVDFSKVVISDMLRRNVRD------RSD 117 (659)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~-g~------~~VtgvD~S~~~i~~~~~~~~~~------~~~ 117 (659)
+.....+.+++.. ...++.+|||+|||+|.++..+++. +. .+|+++|+++.+++.++++.... ..+
T Consensus 68 p~~~~~~~~~l~~-~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 146 (227)
T 1r18_A 68 PHMHAFALEYLRD-HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQ 146 (227)
T ss_dssp HHHHHHHHHHTTT-TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred hHHHHHHHHHHHh-hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCc
Confidence 3444555666631 1256789999999999999999885 42 48999999999999887766443 357
Q ss_pred cEEEEeecCCCCCCC-CcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 118 MRWRVMDMTSMQFMD-ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 118 i~~~~~D~~~l~~~~-~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+.++++|+.+ ++++ ++||+|++...++++ ++++.++|||||++++....
T Consensus 147 v~~~~~d~~~-~~~~~~~fD~I~~~~~~~~~-------------~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 147 LLIVEGDGRK-GYPPNAPYNAIHVGAAAPDT-------------PTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp EEEEESCGGG-CCGGGCSEEEEEECSCBSSC-------------CHHHHHTEEEEEEEEEEESC
T ss_pred eEEEECCccc-CCCcCCCccEEEECCchHHH-------------HHHHHHHhcCCCEEEEEEec
Confidence 9999999987 4444 789999998888765 36789999999999998754
No 189
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.14 E-value=2.3e-10 Score=118.44 Aligned_cols=105 Identities=14% Similarity=0.093 Sum_probs=82.8
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCeEEEEcC-CHHHHHHHHHHh-----hcCC------CCcEEEEeecCCCC--C--
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDF-SKVVISDMLRRN-----VRDR------SDMRWRVMDMTSMQ--F-- 130 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~-S~~~i~~~~~~~-----~~~~------~~i~~~~~D~~~l~--~-- 130 (659)
.++.+|||+|||+|.++..++..|..+|+++|+ |+.+++.+++.. ...+ .++++...|..+.. +
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 356799999999999999999888669999999 899999887765 2222 36888877766531 2
Q ss_pred --CCCcccEEEecccccccCCcccchHHHHHHHHHHHhccc---c--CeEEEEEE
Q 006149 131 --MDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLK---S--GGKFVCLT 178 (659)
Q Consensus 131 --~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLk---p--GG~lvi~~ 178 (659)
++++||+|++..++++... ...+++.+.++|+ | ||+++++.
T Consensus 158 ~~~~~~fD~Ii~~dvl~~~~~-------~~~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSFHQA-------HDALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp HHSCSSBSEEEEESCCSCGGG-------HHHHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred hccCCCCCEEEEeCcccChHH-------HHHHHHHHHHHhcccCCCCCCEEEEEE
Confidence 3578999999888887543 4589999999999 9 99877654
No 190
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.14 E-value=1.9e-10 Score=118.40 Aligned_cols=111 Identities=15% Similarity=0.232 Sum_probs=89.2
Q ss_pred HHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc-C-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCC
Q 006149 55 DPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQF 130 (659)
Q Consensus 55 ~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~-g-~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~ 130 (659)
..+...+.. .++.+|||+|||+|.++..++.. + ..+|+++|+++.+++.+++.....+ .++.++++|+.+. +
T Consensus 102 ~~i~~~~~~---~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~ 177 (277)
T 1o54_A 102 SFIAMMLDV---KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-F 177 (277)
T ss_dssp HHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-C
T ss_pred HHHHHHhCC---CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-c
Confidence 344455543 57789999999999999999987 4 4699999999999998887765544 4799999999886 6
Q ss_pred CCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 131 MDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 131 ~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
++++||+|++. ..++. .++.++.++|+|||++++.+...
T Consensus 178 ~~~~~D~V~~~-----~~~~~-------~~l~~~~~~L~pgG~l~~~~~~~ 216 (277)
T 1o54_A 178 DEKDVDALFLD-----VPDPW-------NYIDKCWEALKGGGRFATVCPTT 216 (277)
T ss_dssp SCCSEEEEEEC-----CSCGG-------GTHHHHHHHEEEEEEEEEEESSH
T ss_pred cCCccCEEEEC-----CcCHH-------HHHHHHHHHcCCCCEEEEEeCCH
Confidence 66789999973 23332 78999999999999999998753
No 191
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.14 E-value=1.5e-10 Score=122.28 Aligned_cols=103 Identities=14% Similarity=0.082 Sum_probs=87.6
Q ss_pred CeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcC--CCCcEEEEeecCCCCCCCCcccEEEecccccc
Q 006149 70 PQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRD--RSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146 (659)
Q Consensus 70 ~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~--~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~ 146 (659)
.+|||+|||+|..+..+++. +..+++++|+ +.+++.++++.... ..+++++.+|+.+ +++ ++||+|++..++++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~~ 245 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSRIIGD 245 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEESCGGG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEchhccC
Confidence 89999999999999999887 3358999999 99999887765432 3579999999988 565 68999999999998
Q ss_pred cCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 147 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 147 l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+.+.. ..+++++++++|+|||++++.+..
T Consensus 246 ~~~~~-----~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 246 LDEAA-----SLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp CCHHH-----HHHHHHHHHHHSCTTCEEEEEECC
T ss_pred CCHHH-----HHHHHHHHHHhcCCCCEEEEEEec
Confidence 75443 569999999999999999999865
No 192
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.13 E-value=9.1e-11 Score=116.43 Aligned_cols=103 Identities=12% Similarity=0.082 Sum_probs=82.3
Q ss_pred CCCeEEEECCCcchHHHHHHHc-C-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCC-C-CCC----CcccE
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM-Q-FMD----ETFDV 137 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g-~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l-~-~~~----~sFDv 137 (659)
++.+|||+|||+|..+..++.. + ..+|+++|+++.+++.++++....+ .+++++++|+.+. + +.. ++||+
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDL 143 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccE
Confidence 5679999999999999999986 2 4699999999999999988775544 4599999998664 2 211 78999
Q ss_pred EEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 138 ILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 138 Vi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
|+...... ....+++++.++|+|||++++.+..
T Consensus 144 v~~~~~~~----------~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 144 IYIDADKA----------NTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp EEECSCGG----------GHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EEECCCHH----------HHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 99654321 1458999999999999999987654
No 193
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.13 E-value=1.3e-09 Score=116.03 Aligned_cols=157 Identities=17% Similarity=0.178 Sum_probs=102.8
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCC------CeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEe
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAGF------HGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILD 140 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g~------~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~ 140 (659)
.++.+|||+|||+|.++..+++... .+++|+|+++.+++.++......+.++.+.++|..... ..++||+|++
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~-~~~~fD~Ii~ 207 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANL-LVDPVDVVIS 207 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCC-CCCCEEEEEE
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCcc-ccCCccEEEE
Confidence 3568999999999999998887631 48999999999999887765444457899999987743 4578999999
Q ss_pred cccccccCCccc----------ch-HHHHHHHHHHHhccccCeEEEEEEcCCchhh----cchhhhh-ccCceEEEeeeC
Q 006149 141 KGGLDALMEPEL----------GH-KLGNQYLSEVKRLLKSGGKFVCLTLAESHVL----GLLFPKF-RFGWKMSVHAIP 204 (659)
Q Consensus 141 ~g~l~~l~~~~~----------~~-~~~~~~l~ei~rvLkpGG~lvi~~~~~~~~~----~~l~~~~-~~~w~~~~~~i~ 204 (659)
+..+.++...+. +. .....++..+.+.|+|||+++++.... .+. ..+...+ ..+|...+..++
T Consensus 208 NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~-~~~~~~~~~ir~~l~~~~~~~~ii~lp 286 (344)
T 2f8l_A 208 DLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA-MFGTSDFAKVDKFIKKNGHIEGIIKLP 286 (344)
T ss_dssp ECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG-GGGSTTHHHHHHHHHHHEEEEEEEECC
T ss_pred CCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch-hcCCchHHHHHHHHHhCCeEEEeeeCC
Confidence 988765432210 00 012368999999999999999988431 111 1122222 224544444444
Q ss_pred CCCCCCCCCccEEEEEEecCC
Q 006149 205 QKSSSEPSLQTFMVVADKENS 225 (659)
Q Consensus 205 ~~~~~~~~l~~f~~v~~k~~~ 225 (659)
...-........+++.+|.+.
T Consensus 287 ~~~F~~~~~~~~i~vl~k~~~ 307 (344)
T 2f8l_A 287 ETLFKSEQARKSILILEKADV 307 (344)
T ss_dssp GGGSCC-CCCEEEEEEEECCT
T ss_pred hhhccCCCCceEEEEEECCCC
Confidence 321122234557777777554
No 194
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.12 E-value=1.5e-10 Score=114.89 Aligned_cols=103 Identities=15% Similarity=0.058 Sum_probs=81.9
Q ss_pred CCCeEEEECCCcchHHHHHHHc-C-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCC-C-CC---CCcccEE
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM-Q-FM---DETFDVI 138 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g-~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l-~-~~---~~sFDvV 138 (659)
++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.+++.....+ .+++++++|+.+. + ++ .++||+|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v 137 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFI 137 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEE
Confidence 5689999999999999999987 2 3599999999999998887765444 4699999999764 1 11 1679999
Q ss_pred EecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 139 LDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 139 i~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
++.+.... ...+++++.++|+|||++++.+..
T Consensus 138 ~~d~~~~~----------~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 138 FIDADKQN----------NPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp EECSCGGG----------HHHHHHHHHHTCCTTCEEEEESCS
T ss_pred EEcCCcHH----------HHHHHHHHHHhcCCCcEEEEeCCC
Confidence 97654221 458999999999999988886653
No 195
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.12 E-value=3.7e-10 Score=118.33 Aligned_cols=99 Identities=16% Similarity=0.195 Sum_probs=75.6
Q ss_pred chHHHHHHHHHHhhhhhhhhhccccCCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCC----CC
Q 006149 515 ASSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT----QD 590 (659)
Q Consensus 515 ~~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~----~d 590 (659)
.+.||++|.+ ++++. .+.+.+||.||.|.|.+++.+.++.|..+|++|||||.++++|+++|... .+
T Consensus 78 e~~y~e~l~~-~~l~~--------~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~ 148 (304)
T 2o07_A 78 EFSYQEMIAN-LPLCS--------HPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSS 148 (304)
T ss_dssp HHHHHHHHHH-HHHTT--------SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGC
T ss_pred chHHHHHHHH-HHHhh--------CCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCC
Confidence 4678887654 44433 25678999999999999999999888889999999999999999998431 23
Q ss_pred CCeeEE-----------------------e------cccchhHHHHHHHhhccCCCCcEEEecC
Q 006149 591 KSLKVF-----------------------N------HLFCLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 591 ~rl~vf-----------------------~------~l~~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
+|++++ . ++++.+|++.++++| +++|+++.|.
T Consensus 149 ~rv~v~~~Da~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L---kpgG~lv~~~ 209 (304)
T 2o07_A 149 SKLTLHVGDGFEFMKQNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTAL---KEDGVLCCQG 209 (304)
T ss_dssp TTEEEEESCHHHHHHTCSSCEEEEEEECC-----------CHHHHHHHHHE---EEEEEEEEEE
T ss_pred CcEEEEECcHHHHHhhCCCCceEEEECCCCCCCcchhhhHHHHHHHHHhcc---CCCeEEEEec
Confidence 444221 1 256788999999999 9999998764
No 196
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.11 E-value=3.8e-10 Score=114.15 Aligned_cols=125 Identities=13% Similarity=0.020 Sum_probs=95.1
Q ss_pred CCCeEEEECCCcchHHHHHHHcCC-CeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCcccEEEecccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGL 144 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~-~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDvVi~~g~l 144 (659)
++.+|||+|||+|.++..|+..+. ..|+++|+++.+++.+++.....+ .++++.++|..+...++++||+|+..|..
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~IviagmG 100 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMG 100 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEEC
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCCc
Confidence 578999999999999999999864 579999999999999987766555 46999999998865444469999875544
Q ss_pred cccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCchhhcchhhhhccCceEEEeee
Q 006149 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKMSVHAI 203 (659)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~~~~~l~~~~~~~w~~~~~~i 203 (659)
..+ +..++..+.+.|+++|+|++............+. ..+|.+.-..+
T Consensus 101 g~l---------I~~IL~~~~~~L~~~~~lIlq~~~~~~~lr~~L~--~~Gf~i~~E~l 148 (244)
T 3gnl_A 101 GTL---------IRTILEEGAAKLAGVTKLILQPNIAAWQLREWSE--QNNWLITSEAI 148 (244)
T ss_dssp HHH---------HHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHH--HHTEEEEEEEE
T ss_pred hHH---------HHHHHHHHHHHhCCCCEEEEEcCCChHHHHHHHH--HCCCEEEEEEE
Confidence 322 5688999999999999999988654332222222 23787755554
No 197
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.11 E-value=2.4e-10 Score=121.25 Aligned_cols=132 Identities=19% Similarity=0.059 Sum_probs=94.3
Q ss_pred cccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC-C--CcEEEE
Q 006149 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-S--DMRWRV 122 (659)
Q Consensus 46 wy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~-~--~i~~~~ 122 (659)
|+.+....+..+.+++.. ..++.+|||+|||+|.++..++..|. +|+++|+|+.+++.+++.....+ . ++.+++
T Consensus 133 ~f~dq~~~~~~l~~~~~~--~~~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~ 209 (332)
T 2igt_A 133 VFPEQIVHWEWLKNAVET--ADRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWIC 209 (332)
T ss_dssp CCGGGHHHHHHHHHHHHH--SSSCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEEC
T ss_pred echHHHHHHHHHHHHHHh--cCCCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEE
Confidence 444555555566676641 02567999999999999999999887 99999999999998877665443 2 489999
Q ss_pred eecCCCCC----CCCcccEEEecccccccCCc---ccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 123 MDMTSMQF----MDETFDVILDKGGLDALMEP---ELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 123 ~D~~~l~~----~~~sFDvVi~~g~l~~l~~~---~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+|+.++.. .+++||+|++.......... .........++.++.++|+|||++++....
T Consensus 210 ~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 210 EDAMKFIQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp SCHHHHHHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred CcHHHHHHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 99987532 14689999985432221100 001123678999999999999997776544
No 198
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.10 E-value=8.9e-11 Score=118.47 Aligned_cols=112 Identities=13% Similarity=0.098 Sum_probs=84.1
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc-----CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeec
Q 006149 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-----GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDM 125 (659)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~-----g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~ 125 (659)
+.....+..++.. .++.+|||||||+|..+..|++. ...+|++||+|+.+++.++ ...++++++++|+
T Consensus 67 p~~~~~l~~~l~~---~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~----~~~~~v~~~~gD~ 139 (236)
T 2bm8_A 67 PDTQAVYHDMLWE---LRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA----SDMENITLHQGDC 139 (236)
T ss_dssp HHHHHHHHHHHHH---HCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG----GGCTTEEEEECCS
T ss_pred HHHHHHHHHHHHh---cCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh----ccCCceEEEECcc
Confidence 3444445555543 24579999999999999999886 2359999999998887554 1236899999999
Q ss_pred CCC---CCCC-CcccEEEecccccccCCcccchHHHHHHHHHHHh-ccccCeEEEEEEc
Q 006149 126 TSM---QFMD-ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKR-LLKSGGKFVCLTL 179 (659)
Q Consensus 126 ~~l---~~~~-~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~r-vLkpGG~lvi~~~ 179 (659)
.+. +... .+||+|++.+. +. . ...++.++.+ +|||||++++.+.
T Consensus 140 ~~~~~l~~~~~~~fD~I~~d~~--~~---~-----~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 140 SDLTTFEHLREMAHPLIFIDNA--HA---N-----TFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp SCSGGGGGGSSSCSSEEEEESS--CS---S-----HHHHHHHHHHHTCCTTCEEEECSC
T ss_pred hhHHHHHhhccCCCCEEEECCc--hH---h-----HHHHHHHHHHhhCCCCCEEEEEeC
Confidence 984 5433 47999997654 21 2 4589999997 9999999999764
No 199
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.10 E-value=5.2e-10 Score=116.78 Aligned_cols=116 Identities=16% Similarity=0.162 Sum_probs=84.6
Q ss_pred chHHHHHHHHHHhhhhhhhhhccccCCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCC----CCC
Q 006149 515 ASSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF----TQD 590 (659)
Q Consensus 515 ~~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl----~~d 590 (659)
.+.||++|++ ++++.+ +.+.+||.||+|.|.++..+.++.|..+|++|||||.++++|+++|.- ..+
T Consensus 73 e~~y~e~l~~-~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~ 143 (296)
T 1inl_A 73 EFMYHEMLAH-VPMFLH--------PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDD 143 (296)
T ss_dssp HHHHHHHHHH-HHHHHS--------SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGC
T ss_pred hhHHHHHHhH-HHHhcC--------CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCC
Confidence 3679997775 444322 556899999999999999999988888999999999999999999821 123
Q ss_pred CCe------------------eEE-----e-------cccchhHHHHHHHhhccCCCCcEEEecCc------hHHHHHHH
Q 006149 591 KSL------------------KVF-----N-------HLFCLQLEEDVNLVLFGLSSESCIKDNSF------PEAAVQLG 634 (659)
Q Consensus 591 ~rl------------------~vf-----~-------~l~~~~f~~~~~~~Lf~~~~~g~~~~n~~------~~~~~~l~ 634 (659)
+|+ |+. + ++++.+|++.++++| +|+|+++.+.- ......++
T Consensus 144 ~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~L---kpgG~lv~~~~~~~~~~~~~~~~~~ 220 (296)
T 1inl_A 144 PRAEIVIANGAEYVRKFKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDAL---KEDGVFSAETEDPFYDIGWFKLAYR 220 (296)
T ss_dssp TTEEEEESCHHHHGGGCSSCEEEEEEEC----------CCSHHHHHHHHHHE---EEEEEEEEECCCTTTTHHHHHHHHH
T ss_pred CceEEEECcHHHHHhhCCCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhc---CCCcEEEEEccCcccCHHHHHHHHH
Confidence 444 221 1 236689999999999 99999998742 12233445
Q ss_pred hhcc-CCcc
Q 006149 635 KLVK-FQHL 642 (659)
Q Consensus 635 ~~~~-f~~~ 642 (659)
.+.+ |++.
T Consensus 221 ~l~~~F~~v 229 (296)
T 1inl_A 221 RISKVFPIT 229 (296)
T ss_dssp HHHHHCSEE
T ss_pred HHHHHCCce
Confidence 5555 7754
No 200
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.10 E-value=1.4e-10 Score=114.04 Aligned_cols=101 Identities=16% Similarity=0.198 Sum_probs=80.4
Q ss_pred CCCeEEEECCCcchHHHHHHHc-C-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCC-CCCCCcccEEEecc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM-QFMDETFDVILDKG 142 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g-~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l-~~~~~sFDvVi~~g 142 (659)
++.+|||+|||+|..+..++.. + ..+|+++|+++.+++.++++....+ .+++++++|+.+. +..++ ||+|++..
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 4679999999999999999886 2 3599999999999998877664433 4699999999764 44446 99999763
Q ss_pred cccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 143 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 143 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
... . ...+++++.++|+|||++++.+.
T Consensus 135 ~~~-----~-----~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 135 DVF-----N-----GADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp TTS-----C-----HHHHHHHHGGGEEEEEEEEEESS
T ss_pred Chh-----h-----hHHHHHHHHHhcCCCeEEEEECc
Confidence 211 1 45899999999999999988653
No 201
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.09 E-value=1.3e-10 Score=123.83 Aligned_cols=103 Identities=13% Similarity=0.076 Sum_probs=81.4
Q ss_pred CCCCeEEEECCCcchHHHHHHHcC-CCeEEEEcCCHHHHHHHHHHhh--cCCCCcEEEEeecCCCCCCCCcccEEEeccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNV--RDRSDMRWRVMDMTSMQFMDETFDVILDKGG 143 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g-~~~VtgvD~S~~~i~~~~~~~~--~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~ 143 (659)
.+..+|||||||+|..+..+++.. ..+++++|+++ ++. .++.. ...++++++.+|+. .+++ +||+|++..+
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~-~~~--~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~~v 256 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAE-VVA--RHRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLKRI 256 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHH-HHT--TCCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEESC
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHH-Hhh--cccccccCCCCCeEEEecCCC-CCCC--CCcEEEEehh
Confidence 467899999999999999998863 34799999954 433 11111 12357999999997 3555 8999999999
Q ss_pred ccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 144 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 144 l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
++++.+.+ ..++|++++++|||||++++.+..
T Consensus 257 lh~~~d~~-----~~~~L~~~~~~LkpgG~l~i~e~~ 288 (348)
T 3lst_A 257 LHNWGDED-----SVRILTNCRRVMPAHGRVLVIDAV 288 (348)
T ss_dssp GGGSCHHH-----HHHHHHHHHHTCCTTCEEEEEECC
T ss_pred ccCCCHHH-----HHHHHHHHHHhcCCCCEEEEEEec
Confidence 99987654 569999999999999999999865
No 202
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.09 E-value=3.3e-10 Score=119.27 Aligned_cols=122 Identities=15% Similarity=0.038 Sum_probs=90.0
Q ss_pred HHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc--CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCCCC
Q 006149 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQFMD 132 (659)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~--g~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~~~ 132 (659)
.+..++.. .++.+|||+|||+|..+..+++. +...|+++|+|+.+++.++++....+ .++.++++|+.+++..+
T Consensus 109 l~~~~l~~---~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~ 185 (315)
T 1ixk_A 109 YPPVALDP---KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELN 185 (315)
T ss_dssp HHHHHHCC---CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGC
T ss_pred HHHHHhCC---CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccccc
Confidence 34455543 57889999999999999999976 23689999999999998887765444 57999999999876556
Q ss_pred CcccEEEecc------cccccCCc------cc---chHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 133 ETFDVILDKG------GLDALMEP------EL---GHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 133 ~sFDvVi~~g------~l~~l~~~------~~---~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
++||+|++.. ++....+. +. .......+++++.++|||||++++++.+
T Consensus 186 ~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 186 VEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp CCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred ccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 7899999742 23221110 00 0011368999999999999999998865
No 203
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.08 E-value=5.2e-10 Score=115.26 Aligned_cols=103 Identities=8% Similarity=0.022 Sum_probs=85.5
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCCCCCcccEEEecccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQFMDETFDVILDKGGL 144 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~~~~sFDvVi~~g~l 144 (659)
.++.+|||+|||+|.++..+++. +..+|+++|+++.+++.+++.....+ .++.++++|+.+.+. .++||+|++....
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH 196 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc
Confidence 46789999999999999999987 34689999999999999887765554 578999999998743 5789999987554
Q ss_pred cccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
. ...++.++.+.|+|||++++.....
T Consensus 197 ----~-------~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 197 ----K-------THKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp ----S-------GGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ----c-------HHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 1 2377999999999999999887653
No 204
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.08 E-value=1.4e-10 Score=120.30 Aligned_cols=96 Identities=17% Similarity=0.203 Sum_probs=73.9
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEE-EEeecCCCC---CCCCcccEEEeccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRW-RVMDMTSMQ---FMDETFDVILDKGG 143 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~-~~~D~~~l~---~~~~sFDvVi~~g~ 143 (659)
++.+|||+|||||.++..|++.|..+|+|+|+|+.|++.+.+ ..+++.. ...|+..++ ++..+||+|++..+
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r----~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~s 160 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLR----QDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVS 160 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHH----TCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCS
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHH----hCcccceecccCceecchhhCCCCCCCEEEEEee
Confidence 567999999999999999999987899999999999876432 1233332 233444443 34456999998877
Q ss_pred ccccCCcccchHHHHHHHHHHHhccccCeEEEEE
Q 006149 144 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCL 177 (659)
Q Consensus 144 l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~ 177 (659)
++++ ..+|.++.++|+|||+++++
T Consensus 161 f~sl----------~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 161 FISL----------NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp SSCG----------GGTHHHHHHHSCTTCEEEEE
T ss_pred HhhH----------HHHHHHHHHHcCcCCEEEEE
Confidence 7654 27899999999999999997
No 205
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.08 E-value=3.7e-11 Score=121.07 Aligned_cols=96 Identities=17% Similarity=0.220 Sum_probs=65.5
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhc----CCCCcEEEE-eecCCCCCCCCcccEEEecc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR----DRSDMRWRV-MDMTSMQFMDETFDVILDKG 142 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~----~~~~i~~~~-~D~~~l~~~~~sFDvVi~~g 142 (659)
++.+|||+|||+|.++..|++.|..+|+|+|+|+.|++.++++... ...++.+.. .|+....++..+||++++
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~-- 114 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFI-- 114 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSS--
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhh--
Confidence 4679999999999999999999867999999999999875443211 012333332 222221122334444432
Q ss_pred cccccCCcccchHHHHHHHHHHHhccccCeEEEEEE
Q 006149 143 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (659)
Q Consensus 143 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~ 178 (659)
++ ..++.+++++|||||++++..
T Consensus 115 ---~l----------~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 115 ---SL----------DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp ---CG----------GGTHHHHHHHSCTTCEEEEEE
T ss_pred ---hH----------HHHHHHHHHhccCCCEEEEEE
Confidence 22 278999999999999999874
No 206
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.08 E-value=1.7e-10 Score=119.71 Aligned_cols=122 Identities=16% Similarity=0.116 Sum_probs=85.6
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCC
Q 006149 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ 129 (659)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~ 129 (659)
.+...+.+++.. .++.+|||+|||+|.++..++..+..+|+++|+|+.+++.+++.....+ .+++++++|+.+.
T Consensus 110 ~lv~~~l~~~~~---~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~- 185 (284)
T 1nv8_A 110 ELVELALELIRK---YGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP- 185 (284)
T ss_dssp HHHHHHHHHHHH---HTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-
T ss_pred HHHHHHHHHhcc---cCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh-
Confidence 344445555532 2457999999999999999988743599999999999998877765544 2499999999873
Q ss_pred CCCCcc---cEEEecccccccCC---cc--cchHH-------HHHHHHHHH-hccccCeEEEEEE
Q 006149 130 FMDETF---DVILDKGGLDALME---PE--LGHKL-------GNQYLSEVK-RLLKSGGKFVCLT 178 (659)
Q Consensus 130 ~~~~sF---DvVi~~g~l~~l~~---~~--~~~~~-------~~~~l~ei~-rvLkpGG~lvi~~ 178 (659)
++ ++| |+|+++........ ++ ..+.. ...+++++. +.|+|||++++..
T Consensus 186 ~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 186 FK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp GG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred cc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 33 579 99999732221100 00 00000 126899999 9999999999854
No 207
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.08 E-value=6.6e-10 Score=111.17 Aligned_cols=125 Identities=14% Similarity=0.126 Sum_probs=93.9
Q ss_pred CCCeEEEECCCcchHHHHHHHcCC-CeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCC-cccEEEeccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDE-TFDVILDKGG 143 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~-~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~-sFDvVi~~g~ 143 (659)
++.+|||+|||+|.++..++..+. .+|+++|+++.+++.+++.....+ .++++.++|..+ +++.+ .||+|+..|+
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~-~l~~~~~~D~IviaG~ 93 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLA-AFEETDQVSVITIAGM 93 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG-GCCGGGCCCEEEEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhh-hcccCcCCCEEEEcCC
Confidence 578999999999999999999863 589999999999999987766555 369999999965 23333 6999987654
Q ss_pred ccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCchhhcchhhhhccCceEEEeeeC
Q 006149 144 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKMSVHAIP 204 (659)
Q Consensus 144 l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~~~~~l~~~~~~~w~~~~~~i~ 204 (659)
... .+..++..+...|+++|++++....+.......+. ..+|.+.-..+-
T Consensus 94 Gg~---------~i~~Il~~~~~~L~~~~~lVlq~~~~~~~vr~~L~--~~Gf~i~~e~lv 143 (225)
T 3kr9_A 94 GGR---------LIARILEEGLGKLANVERLILQPNNREDDLRIWLQ--DHGFQIVAESIL 143 (225)
T ss_dssp CHH---------HHHHHHHHTGGGCTTCCEEEEEESSCHHHHHHHHH--HTTEEEEEEEEE
T ss_pred ChH---------HHHHHHHHHHHHhCCCCEEEEECCCCHHHHHHHHH--HCCCEEEEEEEE
Confidence 332 25689999999999999999977653332222222 347877766654
No 208
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.08 E-value=2.7e-10 Score=119.31 Aligned_cols=109 Identities=20% Similarity=0.234 Sum_probs=83.4
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhc-----CCCCcEEEEeecCCCCC--CCCcccEEE
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR-----DRSDMRWRVMDMTSMQF--MDETFDVIL 139 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~-----~~~~i~~~~~D~~~l~~--~~~sFDvVi 139 (659)
++.+|||+|||+|.++..+++. +..+|+++|+++.+++.+++.... ..++++++++|+.++.. ++++||+|+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi 174 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVI 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEE
Confidence 5679999999999999999987 446999999999999988776521 24689999999988653 468999999
Q ss_pred ecccccccCCcccchHH-HHHHHHHHHhccccCeEEEEEEcC
Q 006149 140 DKGGLDALMEPELGHKL-GNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 140 ~~g~l~~l~~~~~~~~~-~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+..+........ . ...+++++.++|||||++++....
T Consensus 175 ~d~~~~~~~~~~----l~~~~~l~~~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 175 IDTTDPAGPASK----LFGEAFYKDVLRILKPDGICCNQGES 212 (304)
T ss_dssp EECC-------------CCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ECCCCccccchh----hhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 865543321110 0 158899999999999999997644
No 209
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.07 E-value=2.5e-10 Score=117.74 Aligned_cols=121 Identities=18% Similarity=0.067 Sum_probs=89.4
Q ss_pred HHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc--CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCC---
Q 006149 57 LISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQF--- 130 (659)
Q Consensus 57 l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~--g~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~--- 130 (659)
+..++.. .++.+|||+|||+|..+..+++. +...|+++|+++.+++.++++....+ .++.++++|+.+++.
T Consensus 75 ~~~~l~~---~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~ 151 (274)
T 3ajd_A 75 PPIVLNP---REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLL 151 (274)
T ss_dssp HHHHHCC---CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH
T ss_pred HHHHhCC---CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhh
Confidence 4445543 57889999999999999999884 44699999999999998877765544 489999999988754
Q ss_pred -CCCcccEEEecccccccCC--------cc---cchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 131 -MDETFDVILDKGGLDALME--------PE---LGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 131 -~~~sFDvVi~~g~l~~l~~--------~~---~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
..++||+|++......... .+ ........+++++.++|||||++++.+.+
T Consensus 152 ~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs 213 (274)
T 3ajd_A 152 KNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCS 213 (274)
T ss_dssp HTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred hccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 2578999997632221100 00 00011468999999999999999998865
No 210
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.07 E-value=5.8e-10 Score=119.90 Aligned_cols=100 Identities=18% Similarity=0.100 Sum_probs=83.8
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEeccccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLD 145 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~ 145 (659)
.+..+|||||||+|.++..+++. +..+++++|+ +.+++.+ ...++++++.+|+.+ +++.+ |+|++..++|
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a-----~~~~~v~~~~~d~~~-~~p~~--D~v~~~~vlh 272 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDA-----PAFSGVEHLGGDMFD-GVPKG--DAIFIKWICH 272 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTC-----CCCTTEEEEECCTTT-CCCCC--SEEEEESCGG
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhh-----hhcCCCEEEecCCCC-CCCCC--CEEEEechhh
Confidence 45689999999999999999886 3358999999 8776543 234789999999987 77654 9999999999
Q ss_pred ccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 146 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 146 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
++.+.+ ..++|++++++|+|||++++.+..
T Consensus 273 ~~~~~~-----~~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 273 DWSDEH-----CLKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp GBCHHH-----HHHHHHHHHHHSCTTCEEEEEECC
T ss_pred cCCHHH-----HHHHHHHHHHHcCCCCEEEEEEec
Confidence 886554 668999999999999999999875
No 211
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.06 E-value=6.5e-10 Score=119.32 Aligned_cols=100 Identities=19% Similarity=0.088 Sum_probs=84.0
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEeccccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLD 145 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~ 145 (659)
.+..+|||||||+|.++..+++. +..+++++|+ +.+++.+ ...++++++.+|+.+ +++.+ |+|++..++|
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a-----~~~~~v~~~~~D~~~-~~p~~--D~v~~~~vlh 270 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEA-----PQFPGVTHVGGDMFK-EVPSG--DTILMKWILH 270 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTC-----CCCTTEEEEECCTTT-CCCCC--SEEEEESCGG
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhh-----hhcCCeEEEeCCcCC-CCCCC--CEEEehHHhc
Confidence 45689999999999999999886 3458999999 7676543 234789999999998 77754 9999999999
Q ss_pred ccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 146 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 146 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
++.+.+ ..++|++++++|+|||++++.+..
T Consensus 271 ~~~d~~-----~~~~L~~~~~~L~pgG~l~i~e~~ 300 (364)
T 3p9c_A 271 DWSDQH-----CATLLKNCYDALPAHGKVVLVQCI 300 (364)
T ss_dssp GSCHHH-----HHHHHHHHHHHSCTTCEEEEEECC
T ss_pred cCCHHH-----HHHHHHHHHHHcCCCCEEEEEEec
Confidence 886544 678999999999999999999875
No 212
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.05 E-value=8.4e-11 Score=121.56 Aligned_cols=108 Identities=15% Similarity=0.086 Sum_probs=77.5
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhc---CCCCcEEE--EeecCCCCCCCCcccEEEec
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR---DRSDMRWR--VMDMTSMQFMDETFDVILDK 141 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~---~~~~i~~~--~~D~~~l~~~~~sFDvVi~~ 141 (659)
.++.+|||+|||+|.++..+++. .+|+|||+++ ++..+.++... .+.++.++ ++|+.+++ +++||+|++.
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvsd 155 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLCD 155 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEEC
T ss_pred CCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEEC
Confidence 46789999999999999999988 4899999998 43222111000 01168999 99999876 6899999998
Q ss_pred ccccccCCcccchHHHHHHHHHHHhccccCe--EEEEEEcC
Q 006149 142 GGLDALMEPELGHKLGNQYLSEVKRLLKSGG--KFVCLTLA 180 (659)
Q Consensus 142 g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG--~lvi~~~~ 180 (659)
.+ +.......+......+|.++.++||||| .|++..+.
T Consensus 156 ~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 156 IG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 76 4433221111111137899999999999 99998776
No 213
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.05 E-value=1.2e-10 Score=111.30 Aligned_cols=87 Identities=18% Similarity=0.228 Sum_probs=75.2
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCC---CCCcccEEEeccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQF---MDETFDVILDKGG 143 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~---~~~sFDvVi~~g~ 143 (659)
.++.+|||+|||. +++|+|+.|++.++++.. .+++++++|+.++++ ++++||+|++..+
T Consensus 11 ~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~---~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~ 72 (176)
T 2ld4_A 11 SAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTG---NEGRVSVENIKQLLQSAHKESSFDIILSGLV 72 (176)
T ss_dssp CTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTT---TTSEEEEEEGGGGGGGCCCSSCEEEEEECCS
T ss_pred CCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhcc---cCcEEEEechhcCccccCCCCCEeEEEECCh
Confidence 5789999999996 239999999998877653 249999999999987 7899999999999
Q ss_pred cccc-CCcccchHHHHHHHHHHHhccccCeEEEEEE
Q 006149 144 LDAL-MEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (659)
Q Consensus 144 l~~l-~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~ 178 (659)
++++ .+. ..++++++|+|||||++++..
T Consensus 73 l~~~~~~~-------~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 73 PGSTTLHS-------AEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp TTCCCCCC-------HHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhcccCH-------HHHHHHHHHHCCCCEEEEEEc
Confidence 9998 554 389999999999999999954
No 214
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.05 E-value=6.1e-11 Score=120.14 Aligned_cols=103 Identities=11% Similarity=0.031 Sum_probs=82.4
Q ss_pred CCCeEEEECCCcchHHHHHHHc-C-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCC-CC-----CCcccE
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ-FM-----DETFDV 137 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g-~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~-~~-----~~sFDv 137 (659)
++.+|||+|||+|..+..|++. + ..+|+++|+++.+++.+++.....+ .+++++++|+.+.. .. +++||+
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~ 139 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDF 139 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeE
Confidence 5679999999999999999985 2 3699999999999988877765544 47999999997752 11 478999
Q ss_pred EEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 138 ILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 138 Vi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
|++..... ....+++++.++|+|||++++.+..
T Consensus 140 V~~d~~~~----------~~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 140 IFIDADKT----------NYLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp EEEESCGG----------GHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EEEcCChH----------HhHHHHHHHHHhcCCCeEEEEECCc
Confidence 99754321 1458899999999999999997653
No 215
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.05 E-value=3.4e-10 Score=113.82 Aligned_cols=117 Identities=17% Similarity=0.103 Sum_probs=89.0
Q ss_pred hhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc-C-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeec
Q 006149 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDM 125 (659)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~-g-~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~ 125 (659)
.+.....+..++.. .++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.+++.....+ .++.++++|+
T Consensus 45 ~~~~~~~l~~l~~~---~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~ 121 (239)
T 2hnk_A 45 SPEEGQFLNILTKI---SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSA 121 (239)
T ss_dssp CHHHHHHHHHHHHH---HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred CHHHHHHHHHHHHh---hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCH
Confidence 33444455555543 35789999999999999999987 2 4699999999999998887765443 3489999998
Q ss_pred CCC-C--------------CCC--CcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 126 TSM-Q--------------FMD--ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 126 ~~l-~--------------~~~--~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
.+. + |++ ++||+|++...... ...+++++.++|+|||++++.+.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~----------~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 122 LETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKEN----------YPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp HHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGG----------HHHHHHHHHHHEEEEEEEEEECS
T ss_pred HHHHHHHHhhcccccccccccCCCCCcCEEEEeCCHHH----------HHHHHHHHHHHcCCCeEEEEEcc
Confidence 653 2 222 78999998654322 45889999999999999999764
No 216
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.05 E-value=6.4e-10 Score=111.56 Aligned_cols=103 Identities=15% Similarity=0.044 Sum_probs=81.1
Q ss_pred CCCeEEEECCCcchHHHHHHHc-C-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCC----CCCC--CcccE
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM----QFMD--ETFDV 137 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g-~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l----~~~~--~sFDv 137 (659)
++.+|||+|||+|..+..++.. + ..+|+++|+++.+++.+++.....+ .+++++++|+.+. +..+ ++||+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 4679999999999999999986 2 3589999999999998877654433 4699999997552 2333 78999
Q ss_pred EEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 138 ILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 138 Vi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
|++..... . ...+++++.++|+|||++++.+..
T Consensus 152 V~~d~~~~-----~-----~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 152 IFIDADKR-----N-----YPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp EEECSCGG-----G-----HHHHHHHHHHTEEEEEEEEEECTT
T ss_pred EEECCCHH-----H-----HHHHHHHHHHHcCCCeEEEEeCCC
Confidence 99754321 1 568999999999999999997654
No 217
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.04 E-value=2.2e-09 Score=113.32 Aligned_cols=116 Identities=21% Similarity=0.311 Sum_probs=85.8
Q ss_pred chHHHHHHHHHHhhhhhhhhhccccCCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCC----CC
Q 006149 515 ASSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT----QD 590 (659)
Q Consensus 515 ~~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~----~d 590 (659)
.+.||++|++ ++++. ++.+.+||.||.|.|.++..+.++.|..++++|||||.++++|+++|..- ++
T Consensus 99 e~~y~e~l~~-~~l~~--------~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~ 169 (321)
T 2pt6_A 99 EFAYHEMMTH-VPMTV--------SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYED 169 (321)
T ss_dssp HHHHHHHHHH-HHHHH--------SSSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGS
T ss_pred chHHHHHHHH-HHHhc--------CCCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCC
Confidence 4679997765 44433 25678999999999999999999888889999999999999999998641 24
Q ss_pred CCeeEE-----------------------------ecccchhHHHHHHHhhccCCCCcEEEecC---c---hHHHHHHHh
Q 006149 591 KSLKVF-----------------------------NHLFCLQLEEDVNLVLFGLSSESCIKDNS---F---PEAAVQLGK 635 (659)
Q Consensus 591 ~rl~vf-----------------------------~~l~~~~f~~~~~~~Lf~~~~~g~~~~n~---~---~~~~~~l~~ 635 (659)
+|+++. .++++.+|++.++++| +|+|+++.+. + ......++.
T Consensus 170 ~~v~~~~~D~~~~l~~~~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~L---kpgG~lv~~~~~~~~~~~~~~~~~~~ 246 (321)
T 2pt6_A 170 KRVNVFIEDASKFLENVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNAL---KPNGYCVAQCESLWIHVGTIKNMIGY 246 (321)
T ss_dssp TTEEEEESCHHHHHHHCCSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHE---EEEEEEEEEECCTTTCHHHHHHHHHH
T ss_pred CcEEEEEccHHHHHhhcCCCceEEEECCcCCCCcchhhhHHHHHHHHHHhc---CCCcEEEEEcCCcccCHHHHHHHHHH
Confidence 455221 1245689999999999 9999998853 2 122334455
Q ss_pred hcc-CCcc
Q 006149 636 LVK-FQHL 642 (659)
Q Consensus 636 ~~~-f~~~ 642 (659)
+.+ |++.
T Consensus 247 l~~~F~~v 254 (321)
T 2pt6_A 247 AKKLFKKV 254 (321)
T ss_dssp HHTTCSEE
T ss_pred HHHHCCCe
Confidence 545 7654
No 218
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.04 E-value=6.6e-10 Score=114.11 Aligned_cols=111 Identities=14% Similarity=0.042 Sum_probs=84.8
Q ss_pred CCCeEEEECCCc--chHHHHHHHc--CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCC----C--CCccc
Q 006149 68 PPPQILVPGCGN--SRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQF----M--DETFD 136 (659)
Q Consensus 68 ~~~~ILDiGCG~--G~~s~~La~~--g~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~----~--~~sFD 136 (659)
...+|||||||+ +..+..+++. +..+|++||.|+.|++.++++..... .++.|+++|+.+.+. + .+.||
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccC
Confidence 346999999997 4344444443 44699999999999999888775432 369999999998521 1 34566
Q ss_pred -----EEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCc
Q 006149 137 -----VILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (659)
Q Consensus 137 -----vVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~ 182 (659)
.|+++++||++.+.+. ...++.++.+.|+|||+|++.+...+
T Consensus 158 ~~~p~av~~~avLH~l~d~~~----p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 158 LTRPVALTVIAIVHFVLDEDD----AVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp TTSCCEEEEESCGGGSCGGGC----HHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred cCCcchHHhhhhHhcCCchhh----HHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 6889999999977541 34899999999999999999988743
No 219
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.04 E-value=7.6e-11 Score=121.19 Aligned_cols=108 Identities=14% Similarity=0.067 Sum_probs=77.3
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhc---CCCCcEEE--EeecCCCCCCCCcccEEEec
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR---DRSDMRWR--VMDMTSMQFMDETFDVILDK 141 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~---~~~~i~~~--~~D~~~l~~~~~sFDvVi~~ 141 (659)
.++.+|||+|||+|.++..+++. .+|+|||+++ ++..+.+.... .+.++.++ ++|+.+++ +++||+|++.
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd 147 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMCD 147 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEEC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEEe
Confidence 46789999999999999999988 5899999998 43221111000 01168999 99999876 6899999998
Q ss_pred ccccccCCcccchHHHHHHHHHHHhccccCe--EEEEEEcC
Q 006149 142 GGLDALMEPELGHKLGNQYLSEVKRLLKSGG--KFVCLTLA 180 (659)
Q Consensus 142 g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG--~lvi~~~~ 180 (659)
.+ ++......+......+|..+.++||||| .|++..+.
T Consensus 148 ~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 148 VG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred Cc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 76 4433321111111138899999999999 99998876
No 220
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.04 E-value=5.8e-10 Score=119.88 Aligned_cols=100 Identities=18% Similarity=0.164 Sum_probs=83.5
Q ss_pred CCCCeEEEECCCcchHHHHHHHcC-CCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEeccccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLD 145 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g-~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~ 145 (659)
.+..+|||+|||+|.++..+++.. ...++++|+ +.+++.++ ..++++++++|+.+ +++. ||+|++..+++
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~-----~~~~v~~~~~d~~~-~~~~--~D~v~~~~~lh 278 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAP-----PLSGIEHVGGDMFA-SVPQ--GDAMILKAVCH 278 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-----CCTTEEEEECCTTT-CCCC--EEEEEEESSGG
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhh-----hcCCCEEEeCCccc-CCCC--CCEEEEecccc
Confidence 456899999999999999999874 357899999 87776442 23679999999988 6664 99999999999
Q ss_pred ccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 146 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 146 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
++.+++ ...+|++++++|+|||++++.+..
T Consensus 279 ~~~d~~-----~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 279 NWSDEK-----CIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp GSCHHH-----HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cCCHHH-----HHHHHHHHHHhcCCCCEEEEEEec
Confidence 986544 569999999999999999998754
No 221
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.03 E-value=3.2e-10 Score=120.96 Aligned_cols=99 Identities=15% Similarity=0.156 Sum_probs=82.8
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEecccccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~ 146 (659)
+..+|||+|||+|.++..+++. +..+++++|+ +.+++.+++ .++++++.+|+.+ +++ .||+|++..++++
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~-~~p--~~D~v~~~~~lh~ 258 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG-----SNNLTYVGGDMFT-SIP--NADAVLLKYILHN 258 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-----BTTEEEEECCTTT-CCC--CCSEEEEESCGGG
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc-----CCCcEEEeccccC-CCC--CccEEEeehhhcc
Confidence 5689999999999999999877 3358999999 888765422 3569999999977 665 3999999999999
Q ss_pred cCCcccchHHHHHHHHHHHhcccc---CeEEEEEEcC
Q 006149 147 LMEPELGHKLGNQYLSEVKRLLKS---GGKFVCLTLA 180 (659)
Q Consensus 147 l~~~~~~~~~~~~~l~ei~rvLkp---GG~lvi~~~~ 180 (659)
+.+.+ ..++|++++++||| ||++++.+..
T Consensus 259 ~~d~~-----~~~~l~~~~~~L~p~~~gG~l~i~e~~ 290 (352)
T 1fp2_A 259 WTDKD-----CLRILKKCKEAVTNDGKRGKVTIIDMV 290 (352)
T ss_dssp SCHHH-----HHHHHHHHHHHHSGGGCCCEEEEEECE
T ss_pred CCHHH-----HHHHHHHHHHhCCCCCCCcEEEEEEee
Confidence 86543 56999999999999 9999999865
No 222
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.03 E-value=1.1e-09 Score=117.85 Aligned_cols=124 Identities=13% Similarity=0.183 Sum_probs=92.8
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCC-CeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCC
Q 006149 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM 128 (659)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~-~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l 128 (659)
.+...+..+. . .++.+|||+|||+|.++..++..+. .+|+|+|+++.+++.++++....+ .++++.++|+.++
T Consensus 205 ~la~~l~~~~-~---~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~ 280 (373)
T 3tm4_A 205 SIANAMIELA-E---LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQL 280 (373)
T ss_dssp HHHHHHHHHH-T---CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGG
T ss_pred HHHHHHHHhh-c---CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhC
Confidence 4444555555 3 5788999999999999999998864 489999999999999988776555 4799999999999
Q ss_pred CCCCCcccEEEecccccccCCcc-cchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 129 QFMDETFDVILDKGGLDALMEPE-LGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 129 ~~~~~sFDvVi~~g~l~~l~~~~-~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
++++++||+|+++..+....... .-......+++++.++| ||.+++++...
T Consensus 281 ~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~~ 332 (373)
T 3tm4_A 281 SQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTEK 332 (373)
T ss_dssp GGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEESCH
T ss_pred CcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECCH
Confidence 88889999999976655432211 11123578899999999 66666666543
No 223
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.03 E-value=4.3e-10 Score=114.23 Aligned_cols=102 Identities=15% Similarity=0.042 Sum_probs=81.9
Q ss_pred CCCeEEEECCCcchHHHHHHHc-C-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCC-C-C-----CCCccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM-Q-F-----MDETFD 136 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g-~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l-~-~-----~~~sFD 136 (659)
++.+|||+|||+|..+..++.. + ..+|+++|+++.+++.+++.....+ ++++++++|+.+. + + ++++||
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 158 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYD 158 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBS
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEE
Confidence 5679999999999999999886 2 3599999999999999887765544 4799999998764 3 2 157899
Q ss_pred EEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 137 VILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 137 vVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
+|++..... . ...+++++.++|+|||++++...
T Consensus 159 ~V~~d~~~~-----~-----~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 159 FIFVDADKD-----N-----YLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp EEEECSCST-----T-----HHHHHHHHHHHBCTTCCEEEECT
T ss_pred EEEEcCchH-----H-----HHHHHHHHHHhCCCCeEEEEecC
Confidence 999754321 1 45899999999999999988653
No 224
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.02 E-value=7.6e-10 Score=113.54 Aligned_cols=97 Identities=9% Similarity=0.010 Sum_probs=75.5
Q ss_pred chHHHHHHHHHHhhhhhhhhhccccCCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCC----CC
Q 006149 515 ASSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT----QD 590 (659)
Q Consensus 515 ~~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~----~d 590 (659)
.+.||++|.+ ++++. ++.+++||+||+|.|.+++.+.++ + .+|++|||||.|+++|+++|... .+
T Consensus 55 ~~~y~e~l~~-~~~~~--------~~~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~ 123 (262)
T 2cmg_A 55 LHIESELLAH-MGGCT--------KKELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNN 123 (262)
T ss_dssp THHHHHHHHH-HHHTT--------SSCCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTC
T ss_pred HHHHHHHHHH-Hhhhc--------CCCCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCC
Confidence 4689998876 33432 256789999999999999999988 7 79999999999999999999541 35
Q ss_pred CCeeEE-----------ec----c-cchhHHHHHHHhhccCCCCcEEEecC
Q 006149 591 KSLKVF-----------NH----L-FCLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 591 ~rl~vf-----------~~----l-~~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
+|+++. +- + ....|++.|+++| +|+|+++.+.
T Consensus 124 ~rv~~~~~D~~~~~~~fD~Ii~d~~dp~~~~~~~~~~L---~pgG~lv~~~ 171 (262)
T 2cmg_A 124 KNFTHAKQLLDLDIKKYDLIFCLQEPDIHRIDGLKRML---KEDGVFISVA 171 (262)
T ss_dssp TTEEEESSGGGSCCCCEEEEEESSCCCHHHHHHHHTTE---EEEEEEEEEE
T ss_pred CeEEEEechHHHHHhhCCEEEECCCChHHHHHHHHHhc---CCCcEEEEEc
Confidence 666433 11 1 1345899999999 9999998864
No 225
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.02 E-value=7.3e-10 Score=117.58 Aligned_cols=108 Identities=14% Similarity=0.234 Sum_probs=82.8
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhc-----CCCCcEEEEeecCCC--CCCCCcccEEE
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR-----DRSDMRWRVMDMTSM--QFMDETFDVIL 139 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~-----~~~~i~~~~~D~~~l--~~~~~sFDvVi 139 (659)
.+.+|||||||+|..+..+++. +..+|+++|+++.+++.+++.... ..++++++++|+.+. .+++++||+|+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi 199 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVI 199 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEE
Confidence 4679999999999999999987 346999999999999988776542 246899999998774 23467899999
Q ss_pred ecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEE
Q 006149 140 DKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (659)
Q Consensus 140 ~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~ 178 (659)
+...... .... . .....+++++.++|+|||++++..
T Consensus 200 ~d~~~p~-~~~~-~-l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 200 VDSSDPI-GPAK-E-LFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp ECCCCTT-SGGG-G-GGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred ECCCCcc-Ccch-h-hhHHHHHHHHHHhcCCCcEEEEec
Confidence 8543211 1111 0 002589999999999999999863
No 226
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.02 E-value=9.8e-10 Score=113.44 Aligned_cols=110 Identities=21% Similarity=0.224 Sum_probs=84.1
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhc-----CCCCcEEEEeecCCC-CCCCCcccEEEe
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR-----DRSDMRWRVMDMTSM-QFMDETFDVILD 140 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~-----~~~~i~~~~~D~~~l-~~~~~sFDvVi~ 140 (659)
.+.+|||+|||+|.++..+++. +..+|++||+++.+++.+++.... ..++++++++|+.+. +..+++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 4679999999999999999987 567999999999999988776522 246899999998763 334578999998
Q ss_pred cccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 141 KGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 141 ~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
............ ....+++.+.++|+|||++++....
T Consensus 155 d~~~~~~~~~~l---~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 155 DSTEPVGPAVNL---FTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp SCSSCCSCCCCC---STTHHHHHHHHHEEEEEEEEEECCC
T ss_pred CCCCCCCcchhh---hHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 554322111000 0147899999999999999998543
No 227
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.01 E-value=6.6e-10 Score=116.42 Aligned_cols=109 Identities=17% Similarity=0.234 Sum_probs=82.1
Q ss_pred CCCeEEEECCCcchHHHHHHHcC-CCeEEEEcCCHHHHHHHHHHhhc-----CCCCcEEEEeecCCC-CCCCCcccEEEe
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVR-----DRSDMRWRVMDMTSM-QFMDETFDVILD 140 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g-~~~VtgvD~S~~~i~~~~~~~~~-----~~~~i~~~~~D~~~l-~~~~~sFDvVi~ 140 (659)
.+.+|||||||+|..+..+++.+ ..+|++||+++.+++.+++.... ..++++++++|+.+. +..+++||+|++
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~ 174 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIIT 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEE
Confidence 46799999999999999999873 46999999999999988776543 257899999998763 444688999998
Q ss_pred cccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 141 KGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 141 ~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
........... .....+++++.++|+|||++++...
T Consensus 175 d~~~~~~~~~~---l~~~~~l~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 175 DSSDPMGPAES---LFKESYYQLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp ECC--------------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCCcchh---hhHHHHHHHHHhccCCCeEEEEecC
Confidence 54432111000 0124789999999999999998763
No 228
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.00 E-value=9.1e-10 Score=115.86 Aligned_cols=111 Identities=17% Similarity=0.172 Sum_probs=84.8
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhc------CCCCcEEEEeecCCC-CCCCCcccEEE
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR------DRSDMRWRVMDMTSM-QFMDETFDVIL 139 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~------~~~~i~~~~~D~~~l-~~~~~sFDvVi 139 (659)
.+.+|||||||+|..+..+++. +..+|++||+++.+++.+++.... ..++++++++|+.+. +..+++||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 4579999999999999999987 456999999999999988776532 147899999999873 44468899999
Q ss_pred ecccccc-cCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 140 DKGGLDA-LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 140 ~~g~l~~-l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
+....+. ...+. .......++++++++|+|||++++...
T Consensus 157 ~d~~~~~~~~~~~-~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 157 IDLTDPVGEDNPA-RLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp EECCCCBSTTCGG-GGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ECCCCcccccCcc-hhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 8755433 00110 000035899999999999999998753
No 229
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.00 E-value=8.7e-10 Score=115.72 Aligned_cols=108 Identities=18% Similarity=0.143 Sum_probs=83.4
Q ss_pred CeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcC-CCCcEEEEeecCCC--CCCCCcccEEEeccccc
Q 006149 70 PQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRD-RSDMRWRVMDMTSM--QFMDETFDVILDKGGLD 145 (659)
Q Consensus 70 ~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~-~~~i~~~~~D~~~l--~~~~~sFDvVi~~g~l~ 145 (659)
.+|||||||+|.++..+++. +..+|++||+++.+++.+++.+... .++++++++|+.++ .+++++||+|++.....
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~ 170 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAG 170 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCc
Confidence 49999999999999999984 3448999999999999887776433 46899999999875 34568999999864333
Q ss_pred ccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 146 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 146 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
....... ....++++++++|+|||+|++....
T Consensus 171 ~~~~~~L---~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 171 AITPQNF---TTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp SCCCGGG---SBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cccchhh---hHHHHHHHHHHhcCCCcEEEEEecC
Confidence 2111110 0258999999999999999988764
No 230
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.00 E-value=1.1e-09 Score=118.54 Aligned_cols=131 Identities=19% Similarity=0.095 Sum_probs=94.7
Q ss_pred cccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC-C--CcEEEE
Q 006149 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-S--DMRWRV 122 (659)
Q Consensus 46 wy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~-~--~i~~~~ 122 (659)
+|......+..+..++. ++.+|||+|||+|.++..++..|..+|+++|+|+.+++.+++.+...+ . ++++++
T Consensus 195 ff~~~~~~~~~~~~~~~-----~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~ 269 (385)
T 2b78_A 195 IFLDQRQVRNELINGSA-----AGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVV 269 (385)
T ss_dssp SCGGGHHHHHHHHHTTT-----BTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEE
T ss_pred cCCcHHHHHHHHHHHhc-----CCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEE
Confidence 44444455555666542 568999999999999999998877799999999999999887765554 2 799999
Q ss_pred eecCCC-C-C--CCCcccEEEecccccccC--CcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 123 MDMTSM-Q-F--MDETFDVILDKGGLDALM--EPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 123 ~D~~~l-~-~--~~~sFDvVi~~g~l~~l~--~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
+|+.+. + . ...+||+|++........ ...........++..+.++|+|||++++.+...
T Consensus 270 ~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 270 MDVFDYFKYARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp SCHHHHHHHHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCHHHHHHHHHHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 999773 2 1 245899999854432110 011111235678889999999999999888653
No 231
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.00 E-value=7.6e-10 Score=114.56 Aligned_cols=108 Identities=16% Similarity=0.194 Sum_probs=81.8
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhc-----------CCCCcEEEEeecCCC-CCCCCcc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR-----------DRSDMRWRVMDMTSM-QFMDETF 135 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~-----------~~~~i~~~~~D~~~l-~~~~~sF 135 (659)
++.+|||+|||+|.++..+++.+..+|++||+++.+++.+++.... ..++++++++|+.+. +. +++|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~f 153 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGF 153 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCE
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCCe
Confidence 4679999999999999999988667999999999999988776511 246799999998763 22 5789
Q ss_pred cEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 136 DVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 136 DvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
|+|++..... ...... -....+++++.++|+|||++++...
T Consensus 154 D~Ii~d~~~~-~~~~~~--l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 154 DVIIADSTDP-VGPAKV--LFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp EEEEEECCCC-C-------TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEECCCCC-CCcchh--hhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 9999754432 111110 0025889999999999999998753
No 232
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.00 E-value=5e-09 Score=105.11 Aligned_cols=102 Identities=17% Similarity=0.137 Sum_probs=85.6
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEeccccccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDAL 147 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~l 147 (659)
++.+|||+|||.|.++..+. +...|+++|+++.+++.+++.....+.+..+.++|....+.+ ++||+|+..-+++++
T Consensus 105 ~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~-~~~DvvLllk~lh~L 181 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPA-EAGDLALIFKLLPLL 181 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCC-CBCSEEEEESCHHHH
T ss_pred CCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCC-CCcchHHHHHHHHHh
Confidence 57799999999999999887 556999999999999999888766678899999999988765 599999999888887
Q ss_pred CCcccchHHHHHHHHHHHhccccCeEEEEEE
Q 006149 148 MEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (659)
Q Consensus 148 ~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~ 178 (659)
...+.+ ..+ ++...|+++|.++-..
T Consensus 182 E~q~~~-----~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 182 EREQAG-----SAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp HHHSTT-----HHH-HHHHHCBCSEEEEEEE
T ss_pred hhhchh-----hHH-HHHHHhcCCCEEEEcC
Confidence 655422 444 7888999999888765
No 233
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.99 E-value=1.5e-09 Score=117.57 Aligned_cols=130 Identities=13% Similarity=0.029 Sum_probs=93.0
Q ss_pred cccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeec
Q 006149 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDM 125 (659)
Q Consensus 46 wy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~ 125 (659)
+|......+..+..++ .++.+|||+|||+|.++..++..|. .|+++|+|+.+++.+++.....+....+.++|+
T Consensus 197 ~f~dqr~~r~~l~~~~-----~~g~~VLDlg~GtG~~sl~~a~~ga-~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~ 270 (393)
T 4dmg_A 197 YYLDQRENRRLFEAMV-----RPGERVLDVYSYVGGFALRAARKGA-YALAVDKDLEALGVLDQAALRLGLRVDIRHGEA 270 (393)
T ss_dssp SCGGGHHHHHHHHTTC-----CTTCEEEEESCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCCCEEEESCH
T ss_pred cCCCHHHHHHHHHHHh-----cCCCeEEEcccchhHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHHHhCCCCcEEEccH
Confidence 5555445555555554 2578999999999999999999887 599999999999998877655554456779998
Q ss_pred CCCC-CCCCcccEEEecccccccCCcc--cchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 126 TSMQ-FMDETFDVILDKGGLDALMEPE--LGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 126 ~~l~-~~~~sFDvVi~~g~l~~l~~~~--~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
.+.. ...+.||+|++......-.... ........++..+.++|+|||++++.+.+.
T Consensus 271 ~~~l~~~~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 271 LPTLRGLEGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp HHHHHTCCCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred HHHHHHhcCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 8752 2134499999764432111000 011235688999999999999999888763
No 234
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.99 E-value=5.9e-10 Score=115.68 Aligned_cols=90 Identities=14% Similarity=0.249 Sum_probs=72.4
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCC
Q 006149 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM 128 (659)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l 128 (659)
+.+...+.+.+.. .++.+|||+|||+|.++..|++.+. +|+++|+++.+++.++++....+ ++++++++|+.++
T Consensus 14 ~~i~~~i~~~~~~---~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~ 89 (285)
T 1zq9_A 14 PLIINSIIDKAAL---RPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT 89 (285)
T ss_dssp HHHHHHHHHHTCC---CTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS
T ss_pred HHHHHHHHHhcCC---CCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecc
Confidence 3455556666654 5778999999999999999999875 99999999999998877764433 5799999999988
Q ss_pred CCCCCcccEEEecccccc
Q 006149 129 QFMDETFDVILDKGGLDA 146 (659)
Q Consensus 129 ~~~~~sFDvVi~~g~l~~ 146 (659)
+++ +||+|+++..++.
T Consensus 90 ~~~--~fD~vv~nlpy~~ 105 (285)
T 1zq9_A 90 DLP--FFDTCVANLPYQI 105 (285)
T ss_dssp CCC--CCSEEEEECCGGG
T ss_pred cch--hhcEEEEecCccc
Confidence 765 7999999755543
No 235
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.99 E-value=1e-09 Score=113.72 Aligned_cols=108 Identities=19% Similarity=0.221 Sum_probs=83.7
Q ss_pred CCCeEEEECCCcchHHHHHHHcC-CCeEEEEcCCHHHHHHHHHHhhcC-----CCCcEEEEeecCCC-CCCCCcccEEEe
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRD-----RSDMRWRVMDMTSM-QFMDETFDVILD 140 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g-~~~VtgvD~S~~~i~~~~~~~~~~-----~~~i~~~~~D~~~l-~~~~~sFDvVi~ 140 (659)
++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.+++..... .++++++++|+.+. +..+++||+|++
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 157 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEE
Confidence 46799999999999999998873 469999999999999887765432 47899999999774 323678999998
Q ss_pred cccccccCCcccchHH-HHHHHHHHHhccccCeEEEEEEc
Q 006149 141 KGGLDALMEPELGHKL-GNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 141 ~g~l~~l~~~~~~~~~-~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
...... .... .. -..+++.+.++|+|||++++...
T Consensus 158 d~~~~~-~~~~---~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 158 DSSDPI-GPAE---TLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp ECCCTT-TGGG---GGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred cCCCCC-Ccch---hhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 543322 1111 00 15899999999999999998854
No 236
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.99 E-value=9e-10 Score=115.91 Aligned_cols=107 Identities=18% Similarity=0.246 Sum_probs=80.2
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcC-----CCCcEEEEeecCCC-CCCCCcccEEEe
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRD-----RSDMRWRVMDMTSM-QFMDETFDVILD 140 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~-----~~~i~~~~~D~~~l-~~~~~sFDvVi~ 140 (659)
.+.+|||||||+|..+..+++. +..+|+++|+++.+++.+++..... .++++++++|+.+. +..+++||+|++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 4579999999999999999987 4569999999999999887766432 46899999998773 334678999998
Q ss_pred cccccccCCcccchHHH-HHHHHHHHhccccCeEEEEEE
Q 006149 141 KGGLDALMEPELGHKLG-NQYLSEVKRLLKSGGKFVCLT 178 (659)
Q Consensus 141 ~g~l~~l~~~~~~~~~~-~~~l~ei~rvLkpGG~lvi~~ 178 (659)
... +.+.... ... ..+++++.++|+|||++++..
T Consensus 188 d~~-~~~~~~~---~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 188 DSS-DPVGPAE---SLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CCC-----------------HHHHHHHHEEEEEEEEEEC
T ss_pred cCC-CCCCcch---hhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 553 2221111 111 589999999999999999875
No 237
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.99 E-value=8.4e-10 Score=109.70 Aligned_cols=115 Identities=15% Similarity=0.105 Sum_probs=86.6
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc-C-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCC
Q 006149 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS 127 (659)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~-g-~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~ 127 (659)
.....+..++.. .++.+|||+|||+|..+..++.. + ..+|+++|+++.+++.+++.....+ .+++++++|+.+
T Consensus 56 ~~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~ 132 (229)
T 2avd_A 56 EQAQLLANLARL---IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALE 132 (229)
T ss_dssp HHHHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred HHHHHHHHHHHh---cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHH
Confidence 333444444432 35689999999999999999986 2 4699999999999998887765543 579999999866
Q ss_pred C--CCCC----CcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 128 M--QFMD----ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 128 l--~~~~----~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
. .+.+ ++||+|++..... . ...+++++.++|+|||++++.+.
T Consensus 133 ~~~~~~~~~~~~~~D~v~~d~~~~-----~-----~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 133 TLDELLAAGEAGTFDVAVVDADKE-----N-----CSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp HHHHHHHTTCTTCEEEEEECSCST-----T-----HHHHHHHHHHHEEEEEEEEEECC
T ss_pred HHHHHHhcCCCCCccEEEECCCHH-----H-----HHHHHHHHHHHcCCCeEEEEECC
Confidence 4 2221 6899999754311 1 45889999999999999998764
No 238
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.98 E-value=1.4e-09 Score=113.42 Aligned_cols=111 Identities=14% Similarity=0.172 Sum_probs=82.0
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhc-----CCCCcEEEEeecCCC-CCCCCcccEEEe
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR-----DRSDMRWRVMDMTSM-QFMDETFDVILD 140 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~-----~~~~i~~~~~D~~~l-~~~~~sFDvVi~ 140 (659)
.+.+|||+|||+|..+..+++. +..+|+++|+++.+++.+++.... ..++++++++|+.+. +..+++||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 4579999999999999999987 557999999999999988776532 247899999998763 444678999997
Q ss_pred cccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 141 KGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 141 ~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
...-.++..... .....+++++.++|+|||++++...+
T Consensus 170 d~~~~~~~~~~~--l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 170 DSTDPTAGQGGH--LFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp EC------------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred cCCCcccCchhh--hhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 533211111000 00258899999999999999997543
No 239
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.98 E-value=2.8e-09 Score=111.62 Aligned_cols=99 Identities=19% Similarity=0.191 Sum_probs=76.5
Q ss_pred chHHHHHHHHHHhhhhhhhhhccccCCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCC----CCC
Q 006149 515 ASSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF----TQD 590 (659)
Q Consensus 515 ~~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl----~~d 590 (659)
.+.||++|.+ +.+.. .+.+.+||+||+|.|.+++.+.++.+..+|++|||||.|+++|+++|.- ..+
T Consensus 78 e~~y~e~l~~-~~l~~--------~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~ 148 (304)
T 3bwc_A 78 EFVYHEVLGH-TSLCS--------HPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLAD 148 (304)
T ss_dssp HHHHHHHHHH-HHHTT--------SSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGC
T ss_pred chHHHHHHhh-hhhhc--------CCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCC
Confidence 4679998775 34432 2567899999999999999999988888999999999999999999821 123
Q ss_pred CCe-------------------eEE-----------ecccchhHHHHHHHhhccCCCCcEEEecC
Q 006149 591 KSL-------------------KVF-----------NHLFCLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 591 ~rl-------------------~vf-----------~~l~~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
+|+ |+. .+|++.+|++.++++| +|+|+++.+.
T Consensus 149 ~~v~~~~~D~~~~~~~~~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~L---kpgG~lv~~~ 210 (304)
T 3bwc_A 149 PRATVRVGDGLAFVRQTPDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRIL---KPDGICCNQG 210 (304)
T ss_dssp TTEEEEESCHHHHHHSSCTTCEEEEEEECC---------CCHHHHHHHHHHE---EEEEEEEEEE
T ss_pred CcEEEEECcHHHHHHhccCCceeEEEECCCCccccchhhhHHHHHHHHHHhc---CCCcEEEEec
Confidence 333 332 2356689999999999 9999998864
No 240
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.97 E-value=2.5e-09 Score=118.02 Aligned_cols=122 Identities=18% Similarity=0.181 Sum_probs=90.9
Q ss_pred HHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc--CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCC--C
Q 006149 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ--F 130 (659)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~--g~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~--~ 130 (659)
.+..++.. .++.+|||+|||+|..+..++.. +...|+++|+++.+++.++++....+ .++.++++|+.+++ +
T Consensus 250 l~~~~l~~---~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~ 326 (450)
T 2yxl_A 250 VASIVLDP---KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEII 326 (450)
T ss_dssp HHHHHHCC---CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSS
T ss_pred HHHHhcCC---CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhh
Confidence 34455544 57889999999999999999885 32689999999999998877765544 57999999999876 5
Q ss_pred CCCcccEEEec------ccccccCCc------ccch---HHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 131 MDETFDVILDK------GGLDALMEP------ELGH---KLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 131 ~~~sFDvVi~~------g~l~~l~~~------~~~~---~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
++++||+|++. |++...++. ++-. .....++.++.++|||||++++++.+
T Consensus 327 ~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 327 GEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCS 391 (450)
T ss_dssp CSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred ccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 55789999962 333322111 0000 01257899999999999999998876
No 241
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.97 E-value=4.4e-09 Score=112.40 Aligned_cols=106 Identities=15% Similarity=0.115 Sum_probs=87.5
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcC-CCCcEEEEeecCCCCCCCCcccEEEecccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRD-RSDMRWRVMDMTSMQFMDETFDVILDKGGL 144 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~-~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l 144 (659)
.+..+|||||||+|.++..+++. +..+++..|. +.+++.+++..... .++++++.+|+.+.+.+ .+|+|+...+|
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~vl 254 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILARVL 254 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEESSG
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeeeec
Confidence 35679999999999999999987 3357888887 77888887665433 36899999999886654 57999999999
Q ss_pred cccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
|.+.+++ ..++|+++++.|+|||++++++..
T Consensus 255 h~~~d~~-----~~~iL~~~~~al~pgg~lli~e~~ 285 (353)
T 4a6d_A 255 HDWADGK-----CSHLLERIYHTCKPGGGILVIESL 285 (353)
T ss_dssp GGSCHHH-----HHHHHHHHHHHCCTTCEEEEEECC
T ss_pred ccCCHHH-----HHHHHHHHHhhCCCCCEEEEEEee
Confidence 9987654 678999999999999999999864
No 242
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.97 E-value=1.1e-09 Score=118.77 Aligned_cols=131 Identities=17% Similarity=0.117 Sum_probs=94.9
Q ss_pred cccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCC--CcEEEEe
Q 006149 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRS--DMRWRVM 123 (659)
Q Consensus 46 wy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~--~i~~~~~ 123 (659)
+|.........+..++ .++.+|||+|||+|.++..++..|..+|+++|+|+.+++.+++.....+- +++++++
T Consensus 200 ~f~~~~~~~~~~~~~~-----~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~ 274 (396)
T 2as0_A 200 FFLDQRENRLALEKWV-----QPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVG 274 (396)
T ss_dssp CCSTTHHHHHHHGGGC-----CTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES
T ss_pred ccCCHHHHHHHHHHHh-----hCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEC
Confidence 4444434344444443 25789999999999999999998777999999999999998877655542 7999999
Q ss_pred ecCCCCC----CCCcccEEEecccccccCCcc--cchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 124 DMTSMQF----MDETFDVILDKGGLDALMEPE--LGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 124 D~~~l~~----~~~sFDvVi~~g~l~~l~~~~--~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
|+.+... ..++||+|++........... ........++.++.++|+|||++++++...
T Consensus 275 d~~~~~~~~~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 275 SAFEEMEKLQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp CHHHHHHHHHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CHHHHHHHHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 9987531 257899999854332211100 001236788999999999999999988763
No 243
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.97 E-value=1.1e-09 Score=110.41 Aligned_cols=102 Identities=13% Similarity=0.039 Sum_probs=81.5
Q ss_pred CCCeEEEECCCcchHHHHHHHc-C-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCC-C-C-----CCCccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM-Q-F-----MDETFD 136 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g-~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l-~-~-----~~~sFD 136 (659)
++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.+++.....+ .+++++++|+.+. + + ++++||
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 149 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYD 149 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcC
Confidence 5679999999999999999886 2 3699999999999999887765544 3699999998764 2 2 257899
Q ss_pred EEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 137 VILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 137 vVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
+|+...... ....+++.+.++|+|||++++.+.
T Consensus 150 ~I~~d~~~~----------~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 150 FGFVDADKP----------NYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp EEEECSCGG----------GHHHHHHHHHHHEEEEEEEEEECT
T ss_pred EEEECCchH----------HHHHHHHHHHHhcCCCeEEEEecC
Confidence 999653211 156899999999999999988654
No 244
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.97 E-value=1.6e-09 Score=114.42 Aligned_cols=109 Identities=19% Similarity=0.270 Sum_probs=83.7
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhc-----CCCCcEEEEeecCCC-CCCCCcccEEEe
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR-----DRSDMRWRVMDMTSM-QFMDETFDVILD 140 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~-----~~~~i~~~~~D~~~l-~~~~~sFDvVi~ 140 (659)
++.+|||+|||+|.++..+++. +..+|+++|+++.+++.+++.... ..++++++++|+.+. +..+++||+|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 4579999999999999999987 456999999999999988776543 146899999998774 334578999998
Q ss_pred cccccccCCcccchHHH-HHHHHHHHhccccCeEEEEEEcC
Q 006149 141 KGGLDALMEPELGHKLG-NQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 141 ~g~l~~l~~~~~~~~~~-~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
... +.+.... ... ..+++++.++|+|||++++...+
T Consensus 196 d~~-~p~~~~~---~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 196 DSS-DPIGPAE---TLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp ECC-CSSSGGG---GGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCc-CCCCcch---hhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 543 2111111 011 58999999999999999997643
No 245
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.96 E-value=2.5e-09 Score=116.00 Aligned_cols=130 Identities=13% Similarity=0.059 Sum_probs=95.4
Q ss_pred ccccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCC---CcEEE
Q 006149 45 EWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRS---DMRWR 121 (659)
Q Consensus 45 ewy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~---~i~~~ 121 (659)
.+|.........+..+. ++.+|||+|||+|.++..++..|..+|+++|+|+.+++.+++.....+- +++++
T Consensus 203 gff~~~~~~~~~l~~~~------~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~ 276 (396)
T 3c0k_A 203 GYYLDQRDSRLATRRYV------ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFV 276 (396)
T ss_dssp SSCGGGHHHHHHHHHHC------TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred CcCcCHHHHHHHHHHhh------CCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEE
Confidence 45555544445555552 5689999999999999999998877999999999999998877655543 79999
Q ss_pred EeecCCCCC----CCCcccEEEecccccccCCc--ccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 122 VMDMTSMQF----MDETFDVILDKGGLDALMEP--ELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 122 ~~D~~~l~~----~~~sFDvVi~~g~l~~l~~~--~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
++|+.+... ..++||+|++.......... .........++.++.++|+|||++++.+..
T Consensus 277 ~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 277 RDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp ESCHHHHHHHHHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ECCHHHHHHHHHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 999987521 14689999986433211000 000123678999999999999999998865
No 246
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.96 E-value=1.4e-09 Score=126.26 Aligned_cols=130 Identities=17% Similarity=0.084 Sum_probs=97.5
Q ss_pred ccccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC---CCcEEE
Q 006149 45 EWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR---SDMRWR 121 (659)
Q Consensus 45 ewy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~---~~i~~~ 121 (659)
.+|.+....+..+..+. ++.+|||+|||+|.++..++..|..+|+++|+|+.+++.+++.....+ .+++++
T Consensus 522 G~f~d~r~~r~~l~~~~------~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i 595 (703)
T 3v97_A 522 GLFLDHRIARRMLGQMS------KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLI 595 (703)
T ss_dssp SCCGGGHHHHHHHHHHC------TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEE
T ss_pred CCcccHHHHHHHHHHhc------CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEE
Confidence 35666656666666554 468999999999999999998888789999999999999987765554 369999
Q ss_pred EeecCCC-CCCCCcccEEEecccccccCCc----ccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 122 VMDMTSM-QFMDETFDVILDKGGLDALMEP----ELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 122 ~~D~~~l-~~~~~sFDvVi~~g~l~~l~~~----~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
++|+.+. +...++||+|++......-... .........++..+.++|+|||++++.+..
T Consensus 596 ~~D~~~~l~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 596 QADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp ESCHHHHHHHCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ecCHHHHHHhcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 9999883 4456789999976533211000 011234778899999999999999987765
No 247
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.96 E-value=1.4e-09 Score=110.23 Aligned_cols=127 Identities=10% Similarity=0.051 Sum_probs=82.1
Q ss_pred HHHHHHHHhhCCCCC--CCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecC
Q 006149 52 QLRDPLISLIGAPTS--SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMT 126 (659)
Q Consensus 52 ~l~~~l~~~l~~~~~--~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~ 126 (659)
.....+...+..... .++.+|||+|||+|.++..++.. +..+|+|+|+|+.+++.++++....+ .+++++++|+.
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 126 (254)
T 2h00_A 47 NYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQK 126 (254)
T ss_dssp HHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred HHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchh
Confidence 344445555543211 14679999999999999988876 23599999999999999887765544 35999999987
Q ss_pred CC---CCC---CCcccEEEecccccccCCc-cc-----c--hHHHHHHHHHHHhccccCeEEEEEE
Q 006149 127 SM---QFM---DETFDVILDKGGLDALMEP-EL-----G--HKLGNQYLSEVKRLLKSGGKFVCLT 178 (659)
Q Consensus 127 ~l---~~~---~~sFDvVi~~g~l~~l~~~-~~-----~--~~~~~~~l~ei~rvLkpGG~lvi~~ 178 (659)
+. +++ +++||+|+++..++..... .. . ......++.+++++|||||.+.++.
T Consensus 127 ~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~ 192 (254)
T 2h00_A 127 TLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVK 192 (254)
T ss_dssp CSSTTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHHH
T ss_pred hhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEH
Confidence 62 444 2689999998766543300 00 0 0012356788899999999876653
No 248
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.95 E-value=2.4e-09 Score=110.58 Aligned_cols=118 Identities=12% Similarity=0.069 Sum_probs=92.0
Q ss_pred cccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEe
Q 006149 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVM 123 (659)
Q Consensus 46 wy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~ 123 (659)
|+.....-+..+.+++. ++.+|||+|||+|.++..++..|..+|+++|+++.+++.+++....++ .+++++++
T Consensus 108 f~~~~~~er~ri~~~~~-----~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~ 182 (278)
T 3k6r_A 108 FSPANVKERVRMAKVAK-----PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNM 182 (278)
T ss_dssp CCGGGHHHHHHHHHHCC-----TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS
T ss_pred EcCCcHHHHHHHHHhcC-----CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeC
Confidence 44444445556666664 689999999999999999999987799999999999998877665554 56999999
Q ss_pred ecCCCCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 124 DMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 124 D~~~l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
|+.+++. .+.||.|++...... ..++..+.++||+||.+.+.++.
T Consensus 183 D~~~~~~-~~~~D~Vi~~~p~~~-----------~~~l~~a~~~lk~gG~ih~~~~~ 227 (278)
T 3k6r_A 183 DNRDFPG-ENIADRILMGYVVRT-----------HEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp CTTTCCC-CSCEEEEEECCCSSG-----------GGGHHHHHHHEEEEEEEEEEEEE
T ss_pred cHHHhcc-ccCCCEEEECCCCcH-----------HHHHHHHHHHcCCCCEEEEEeee
Confidence 9998763 578999986532221 26788888999999998776654
No 249
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.95 E-value=5.5e-10 Score=117.12 Aligned_cols=107 Identities=17% Similarity=0.157 Sum_probs=75.6
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCeEEEEcC----CHHHHHHHHHHhhcC--CCCcEEEEe-ecCCCCCCCCcccEEE
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDF----SKVVISDMLRRNVRD--RSDMRWRVM-DMTSMQFMDETFDVIL 139 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~----S~~~i~~~~~~~~~~--~~~i~~~~~-D~~~l~~~~~sFDvVi 139 (659)
.++.+|||+|||+|.++..+++. +.|+|||+ ++.+++.+ .... .+++.++++ |+..++ .++||+|+
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~ 153 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPI---PMSTYGWNLVRLQSGVDVFFIP--PERCDTLL 153 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCC---CCCSTTGGGEEEECSCCTTTSC--CCCCSEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHH---HhhhcCCCCeEEEeccccccCC--cCCCCEEE
Confidence 46789999999999999999988 47999999 55333211 0111 156899998 888765 56899999
Q ss_pred ecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCC
Q 006149 140 DKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (659)
Q Consensus 140 ~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~ 181 (659)
+..+++ ......+......+|..+.++|||||.|++..+..
T Consensus 154 sd~~~~-~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 154 CDIGES-SPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp ECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred ECCccc-cCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 977664 22111010001157899999999999999877654
No 250
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.95 E-value=1.5e-09 Score=111.36 Aligned_cols=96 Identities=14% Similarity=0.200 Sum_probs=78.5
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhc-----CCCCcEEEEeecCCCCCCCCcccEEEecc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR-----DRSDMRWRVMDMTSMQFMDETFDVILDKG 142 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~-----~~~~i~~~~~D~~~l~~~~~sFDvVi~~g 142 (659)
.+.+|||||||+|.++..+++.+ .+|+++|+++.+++.+++.... ..++++++.+|+.+.. ++||+|++..
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d~ 147 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCLQ 147 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEESS
T ss_pred CCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEECC
Confidence 45799999999999999998887 7999999999999977654322 2468999999998764 7899999752
Q ss_pred cccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 143 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 143 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
.++. .+++.+.++|+|||++++...
T Consensus 148 -----~dp~-------~~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 148 -----EPDI-------HRIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp -----CCCH-------HHHHHHHTTEEEEEEEEEEEE
T ss_pred -----CChH-------HHHHHHHHhcCCCcEEEEEcC
Confidence 2332 489999999999999998753
No 251
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.94 E-value=2.7e-09 Score=116.99 Aligned_cols=125 Identities=17% Similarity=0.135 Sum_probs=93.4
Q ss_pred HHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCC-CeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCC--
Q 006149 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ-- 129 (659)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~-~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~-- 129 (659)
....+..++.. .++.+|||+|||+|..+..+++... ..|+++|+++.+++.++++....+.++.++++|+.+++
T Consensus 234 ~s~~~~~~l~~---~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~ 310 (429)
T 1sqg_A 234 SAQGCMTWLAP---QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQW 310 (429)
T ss_dssp HHHTHHHHHCC---CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHH
T ss_pred HHHHHHHHcCC---CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhh
Confidence 33345555554 5788999999999999999998742 69999999999999888877665667899999999875
Q ss_pred CCCCcccEEEec------ccccccCCc------ccc---hHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 130 FMDETFDVILDK------GGLDALMEP------ELG---HKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 130 ~~~~sFDvVi~~------g~l~~l~~~------~~~---~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+++++||+|++. |++...++. ++. ......++.++.++|||||++++++.+
T Consensus 311 ~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs 376 (429)
T 1sqg_A 311 CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 (429)
T ss_dssp HTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESC
T ss_pred cccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 566789999963 233322110 000 011358899999999999999998865
No 252
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.93 E-value=3.8e-09 Score=112.16 Aligned_cols=99 Identities=9% Similarity=0.081 Sum_probs=82.1
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCcccEEEeccccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGLD 145 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~ 145 (659)
++.+|||+|||+|.++.. +. +..+|+++|+|+.+++.+++.....+ .+++++++|+.+.. ++||+|++.....
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~~ 269 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPKF 269 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTTT
T ss_pred CCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcHh
Confidence 578999999999999999 77 56699999999999999887765554 47999999999875 7899999753222
Q ss_pred ccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCc
Q 006149 146 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (659)
Q Consensus 146 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~ 182 (659)
...++..+.++|+|||.+++.++...
T Consensus 270 -----------~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 270 -----------AHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp -----------GGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred -----------HHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 12678999999999999999887643
No 253
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.90 E-value=3.2e-09 Score=114.33 Aligned_cols=103 Identities=14% Similarity=0.064 Sum_probs=82.5
Q ss_pred CCCeEEEECCCcchHHHHHHHcCC-CeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCC-CCC-CCCcccEEEeccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTS-MQF-MDETFDVILDKGG 143 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~-~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~-l~~-~~~sFDvVi~~g~ 143 (659)
++.+|||+| |+|.++..++..+. .+|+++|+++.+++.++++....+ .+++++++|+.+ ++. .+++||+|++...
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p 250 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPP 250 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCC
Confidence 578999999 99999999988865 699999999999998887765433 379999999998 663 3578999998765
Q ss_pred ccccCCcccchHHHHHHHHHHHhccccCeEE-EEEEc
Q 006149 144 LDALMEPELGHKLGNQYLSEVKRLLKSGGKF-VCLTL 179 (659)
Q Consensus 144 l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~l-vi~~~ 179 (659)
+... ....++.++.++|+|||++ ++...
T Consensus 251 ~~~~--------~~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 251 ETLE--------AIRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp SSHH--------HHHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred CchH--------HHHHHHHHHHHHcccCCeEEEEEEe
Confidence 4432 1368999999999999955 44433
No 254
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.90 E-value=7.7e-07 Score=103.32 Aligned_cols=126 Identities=13% Similarity=0.148 Sum_probs=86.1
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcC-----------------------------------------
Q 006149 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG----------------------------------------- 90 (659)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g----------------------------------------- 90 (659)
.+...+..+... .++..|||++||+|.++..++..+
T Consensus 177 ~LAa~ll~~~~~---~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~ 253 (703)
T 3v97_A 177 TLAAAIVMRSGW---QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLA 253 (703)
T ss_dssp HHHHHHHHHTTC---CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCC---CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccc
Confidence 455556666554 467899999999999998777531
Q ss_pred --CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCC--CCCCcccEEEecccccccCCcccchHHHHHHHHHH
Q 006149 91 --FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ--FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEV 164 (659)
Q Consensus 91 --~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~--~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei 164 (659)
...|+|+|+++.+++.++..+...+ ..+++.++|+.++. ...++||+|+++..+..-..........-+.+.++
T Consensus 254 ~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~ 333 (703)
T 3v97_A 254 EYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRI 333 (703)
T ss_dssp HCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHH
T ss_pred cCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHH
Confidence 1379999999999998877765555 34899999999873 33448999999866543211111111122334455
Q ss_pred HhccccCeEEEEEEcC
Q 006149 165 KRLLKSGGKFVCLTLA 180 (659)
Q Consensus 165 ~rvLkpGG~lvi~~~~ 180 (659)
.+.+.|||.+++++..
T Consensus 334 lk~~~~g~~~~ilt~~ 349 (703)
T 3v97_A 334 MKNQFGGWNLSLFSAS 349 (703)
T ss_dssp HHHHCTTCEEEEEESC
T ss_pred HHhhCCCCeEEEEeCC
Confidence 5555689999999864
No 255
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.90 E-value=1.7e-09 Score=115.56 Aligned_cols=99 Identities=15% Similarity=0.184 Sum_probs=82.1
Q ss_pred CCCeEEEECCCcchHHHHHHHcC-CCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEecccccc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g-~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~ 146 (659)
+..+|||||||+|.++..+++.. ..+++++|+ +.+++.++ ..++++++.+|+.+ +++ .||+|++..++++
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-----~~~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~ 263 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLT-----GNENLNFVGGDMFK-SIP--SADAVLLKWVLHD 263 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCC-----CCSSEEEEECCTTT-CCC--CCSEEEEESCGGG
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcc-----cCCCcEEEeCccCC-CCC--CceEEEEcccccC
Confidence 45799999999999999999873 348999999 66765432 23569999999988 665 4999999999999
Q ss_pred cCCcccchHHHHHHHHHHHhcccc---CeEEEEEEcC
Q 006149 147 LMEPELGHKLGNQYLSEVKRLLKS---GGKFVCLTLA 180 (659)
Q Consensus 147 l~~~~~~~~~~~~~l~ei~rvLkp---GG~lvi~~~~ 180 (659)
+.+++ ..++|++++++|+| ||++++.+..
T Consensus 264 ~~d~~-----~~~~l~~~~~~L~p~~~gG~l~i~e~~ 295 (358)
T 1zg3_A 264 WNDEQ-----SLKILKNSKEAISHKGKDGKVIIIDIS 295 (358)
T ss_dssp SCHHH-----HHHHHHHHHHHTGGGGGGCEEEEEECE
T ss_pred CCHHH-----HHHHHHHHHHhCCCCCCCcEEEEEEec
Confidence 86544 56999999999999 9999998864
No 256
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.90 E-value=3.6e-09 Score=107.07 Aligned_cols=147 Identities=15% Similarity=0.097 Sum_probs=107.4
Q ss_pred cchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecC
Q 006149 48 AEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMT 126 (659)
Q Consensus 48 ~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~ 126 (659)
..+..+...+...+. +..+|||+|||.|-++..++.. +...|+++|+++.+++.+++.+...+.+.++.+.|..
T Consensus 117 p~lD~fY~~i~~~i~-----~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~ 191 (281)
T 3lcv_B 117 PHLDEFYRELFRHLP-----RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLL 191 (281)
T ss_dssp GGHHHHHHHHGGGSC-----CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred HhHHHHHHHHHhccC-----CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeec
Confidence 344444444555552 4679999999999999988877 5679999999999999998887777778899999988
Q ss_pred CCCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc---C--Cchhhcchhhh----h-ccCc
Q 006149 127 SMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL---A--ESHVLGLLFPK----F-RFGW 196 (659)
Q Consensus 127 ~l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~---~--~~~~~~~l~~~----~-~~~w 196 (659)
.-+ +.+.||+|++.-+++++.+... ...+ ++...|+++|.+|-..- + .+.+.+..... . ..+|
T Consensus 192 ~~~-p~~~~DvaL~lkti~~Le~q~k-----g~g~-~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~ 264 (281)
T 3lcv_B 192 EDR-LDEPADVTLLLKTLPCLETQQR-----GSGW-EVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSC 264 (281)
T ss_dssp TSC-CCSCCSEEEETTCHHHHHHHST-----THHH-HHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTC
T ss_pred ccC-CCCCcchHHHHHHHHHhhhhhh-----HHHH-HHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCC
Confidence 765 4588999999999999866552 2556 89999999999987654 1 22332222222 2 2478
Q ss_pred eEEEeeeCCC
Q 006149 197 KMSVHAIPQK 206 (659)
Q Consensus 197 ~~~~~~i~~~ 206 (659)
.+.-..++++
T Consensus 265 ~~~~~~~~nE 274 (281)
T 3lcv_B 265 RIQRLEIGNE 274 (281)
T ss_dssp CEEEEEETTE
T ss_pred ceeeeeecCe
Confidence 7666666543
No 257
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.88 E-value=2.1e-09 Score=118.54 Aligned_cols=122 Identities=16% Similarity=0.169 Sum_probs=89.8
Q ss_pred HHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc--CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCC-CCC
Q 006149 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ-FMD 132 (659)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~--g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~-~~~ 132 (659)
.+..++.. .++.+|||+|||+|..+..++.. +.+.|+++|+|+.+++.++++....+..+.++++|+.+++ +.+
T Consensus 92 l~a~~L~~---~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~ 168 (464)
T 3m6w_A 92 AVGVLLDP---KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFG 168 (464)
T ss_dssp HHHHHHCC---CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHC
T ss_pred HHHHhcCc---CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhcc
Confidence 34455554 57899999999999999999976 3358999999999999888776554433999999998875 346
Q ss_pred CcccEEEec------ccccccCCcc-----cc----hHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 133 ETFDVILDK------GGLDALMEPE-----LG----HKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 133 ~sFDvVi~~------g~l~~l~~~~-----~~----~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
++||+|++. |++..-++.. .. ......++.++.++|||||+++.++.+
T Consensus 169 ~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs 231 (464)
T 3m6w_A 169 TYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCT 231 (464)
T ss_dssp SCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred ccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 899999952 2222211110 00 011378999999999999999998875
No 258
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.88 E-value=5.3e-09 Score=116.15 Aligned_cols=113 Identities=16% Similarity=0.166 Sum_probs=86.1
Q ss_pred CCCeEEEECCCcchHHHHHHHc--CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCC-CCCcccEEEec--
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQF-MDETFDVILDK-- 141 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~--g~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~-~~~sFDvVi~~-- 141 (659)
++.+|||+|||+|..+..++.. +.+.|+++|+|+.+++.++++....+ .++.++++|+.+++. .+++||+|++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 7889999999999999999986 23689999999999998877765443 579999999998753 45789999973
Q ss_pred ----ccccccCCcc------cc---hHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 142 ----GGLDALMEPE------LG---HKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 142 ----g~l~~l~~~~------~~---~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
|++....+.. .. .....++|.++.++|||||++++++.+
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 2332211110 00 011457899999999999999998875
No 259
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.85 E-value=4.4e-09 Score=113.59 Aligned_cols=112 Identities=15% Similarity=0.075 Sum_probs=85.6
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCC----CCCcccEEEecc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQF----MDETFDVILDKG 142 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~----~~~sFDvVi~~g 142 (659)
++.+|||+|||+|.++..++.. ..+|+++|+|+.+++.+++.....+ .+++++++|+.+... .+++||+|++..
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 4679999999999999999988 4589999999999999887765554 459999999987531 257899999754
Q ss_pred cccccCCcc--cchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 143 GLDALMEPE--LGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 143 ~l~~l~~~~--~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
......... ........++..+.++|+|||++++.+..
T Consensus 288 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 288 PAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp CCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 332211100 00123678999999999999999999876
No 260
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.85 E-value=3.1e-08 Score=109.10 Aligned_cols=175 Identities=13% Similarity=0.106 Sum_probs=111.8
Q ss_pred ccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc--------------CCCeEEEEcCCHHHHHHHHHHhh
Q 006149 47 YAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--------------GFHGITNVDFSKVVISDMLRRNV 112 (659)
Q Consensus 47 y~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~--------------g~~~VtgvD~S~~~i~~~~~~~~ 112 (659)
|.....+...+.+++.. .++.+|||+|||+|.++..+++. ...+++|+|+++.+++.++....
T Consensus 153 fyTP~~v~~~mv~~l~~---~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~ 229 (445)
T 2okc_A 153 YFTPRPLIQAMVDCINP---QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY 229 (445)
T ss_dssp GCCCHHHHHHHHHHHCC---CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred ccCcHHHHHHHHHHhCC---CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH
Confidence 33445677777787764 56789999999999999888764 12479999999999987766554
Q ss_pred cCCC---CcEEEEeecCCCCCCCCcccEEEecccccccCCcccc----------hHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 113 RDRS---DMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPELG----------HKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 113 ~~~~---~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~l~~~~~~----------~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
..+. ++.+.++|....+.. .+||+|+++..+......... ......+++++.++|+|||+++++..
T Consensus 230 l~g~~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 230 LHGIGTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp HTTCCSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HhCCCcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 3432 678999999887644 489999998776653322100 00124789999999999999998874
Q ss_pred CC----chhhcchhhhh-ccCceEEEeeeCCCCCCCCCCccEEEEEEecCC
Q 006149 180 AE----SHVLGLLFPKF-RFGWKMSVHAIPQKSSSEPSLQTFMVVADKENS 225 (659)
Q Consensus 180 ~~----~~~~~~l~~~~-~~~w~~~~~~i~~~~~~~~~l~~f~~v~~k~~~ 225 (659)
.. ......+...+ ...+...+..++...=.....+..+++.+|.+.
T Consensus 309 ~~~L~~~~~~~~iR~~L~~~~~l~~ii~lp~~~F~~t~v~t~Il~~~k~~~ 359 (445)
T 2okc_A 309 DNVLFEAGAGETIRKRLLQDFNLHTILRLPTGIFYAQGVKANVLFFSKGQP 359 (445)
T ss_dssp HHHHHCSTHHHHHHHHHHHHEEEEEEEECCSSSSSSTTCCEEEEEEEESSC
T ss_pred CcccccCcHHHHHHHHHHhcCcEEEEEeCCCCCccCCCCCEEEEEEECCCC
Confidence 31 11111122212 122222333443211112345667777877654
No 261
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.83 E-value=1e-08 Score=107.07 Aligned_cols=89 Identities=20% Similarity=0.299 Sum_probs=67.9
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCC
Q 006149 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ 129 (659)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~ 129 (659)
+.+...+.+.+.. .++.+|||+|||+|.++..|++.+. +|+|+|+++.+++.++++....+ ++++++++|+.+++
T Consensus 28 ~~i~~~i~~~~~~---~~~~~VLDiG~G~G~lt~~La~~~~-~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~ 103 (299)
T 2h1r_A 28 PGILDKIIYAAKI---KSSDIVLEIGCGTGNLTVKLLPLAK-KVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTV 103 (299)
T ss_dssp HHHHHHHHHHHCC---CTTCEEEEECCTTSTTHHHHTTTSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSC
T ss_pred HHHHHHHHHhcCC---CCcCEEEEEcCcCcHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCC
Confidence 3455566666654 5678999999999999999998864 99999999999998887764333 68999999999887
Q ss_pred CCCCcccEEEeccccc
Q 006149 130 FMDETFDVILDKGGLD 145 (659)
Q Consensus 130 ~~~~sFDvVi~~g~l~ 145 (659)
++ +||+|+++...+
T Consensus 104 ~~--~~D~Vv~n~py~ 117 (299)
T 2h1r_A 104 FP--KFDVCTANIPYK 117 (299)
T ss_dssp CC--CCSEEEEECCGG
T ss_pred cc--cCCEEEEcCCcc
Confidence 54 899999875544
No 262
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.82 E-value=5.8e-09 Score=114.87 Aligned_cols=122 Identities=16% Similarity=0.110 Sum_probs=89.2
Q ss_pred HHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc--CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCC-CC
Q 006149 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ-FM 131 (659)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~--g~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~-~~ 131 (659)
.+...+.. .++.+|||+|||+|..+..++.. +.+.|+++|+++.+++.++++....+ .++.++++|+.+++ ..
T Consensus 96 l~~~~L~~---~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~ 172 (456)
T 3m4x_A 96 IVGTAAAA---KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHF 172 (456)
T ss_dssp HHHHHHCC---CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHH
T ss_pred HHHHHcCC---CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhc
Confidence 34455544 57899999999999999999876 33689999999999998877665443 57899999998874 33
Q ss_pred CCcccEEEecccccc---cC-Cccc-------c----hHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 132 DETFDVILDKGGLDA---LM-EPEL-------G----HKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 132 ~~sFDvVi~~g~l~~---l~-~~~~-------~----~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+++||+|++...... +. +++. . ......+|.++.++|||||+++.++.+
T Consensus 173 ~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs 236 (456)
T 3m4x_A 173 SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCT 236 (456)
T ss_dssp TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEee
Confidence 578999996432111 10 1110 0 011348899999999999999998875
No 263
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.81 E-value=7.9e-09 Score=109.60 Aligned_cols=97 Identities=20% Similarity=0.320 Sum_probs=77.6
Q ss_pred chHHHHHHHHHHhhhhhhhhhccccCCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC-----CCC
Q 006149 515 ASSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG-----FTQ 589 (659)
Q Consensus 515 ~~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg-----l~~ 589 (659)
.+.||++|++ ++++. .+.+.+||.||.|.|.++..|.++.|..+|++|||||.++++|+++|. + .
T Consensus 103 e~~y~e~L~~-l~l~~--------~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl-~ 172 (334)
T 1xj5_A 103 ECAYQEMITH-LPLCS--------IPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGY-E 172 (334)
T ss_dssp HHHHHHHHHH-HHHTT--------SSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG-G
T ss_pred chHHHHHHHH-HHHhh--------CCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcccc-C
Confidence 5789997775 45443 256789999999999999999998888899999999999999999983 2 1
Q ss_pred CCCe-------------------eEE-----------ecccchhHHHHHHHhhccCCCCcEEEec
Q 006149 590 DKSL-------------------KVF-----------NHLFCLQLEEDVNLVLFGLSSESCIKDN 624 (659)
Q Consensus 590 d~rl-------------------~vf-----------~~l~~~~f~~~~~~~Lf~~~~~g~~~~n 624 (659)
++|+ |+. .++++.+|++.++++| +++|+++.+
T Consensus 173 ~~rv~~~~~D~~~~l~~~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~L---kpgG~lv~~ 234 (334)
T 1xj5_A 173 DPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARAL---RPGGVVCTQ 234 (334)
T ss_dssp STTEEEEESCHHHHHHTSCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHE---EEEEEEEEE
T ss_pred CCcEEEEECCHHHHHHhccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhc---CCCcEEEEe
Confidence 2333 322 1245789999999999 999999886
No 264
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.79 E-value=1.3e-08 Score=106.04 Aligned_cols=90 Identities=10% Similarity=0.077 Sum_probs=75.3
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCC
Q 006149 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQF 130 (659)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~ 130 (659)
+.+...+.+.+.. .++.+|||||||+|.++..|++.+. +|+++|+++.+++.++++.. ..++++++++|+.++++
T Consensus 36 ~~i~~~Iv~~l~~---~~~~~VLEIG~G~G~lT~~La~~~~-~V~aVEid~~li~~a~~~~~-~~~~v~vi~gD~l~~~~ 110 (295)
T 3gru_A 36 KNFVNKAVESANL---TKDDVVLEIGLGKGILTEELAKNAK-KVYVIEIDKSLEPYANKLKE-LYNNIEIIWGDALKVDL 110 (295)
T ss_dssp HHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHSS-EEEEEESCGGGHHHHHHHHH-HCSSEEEEESCTTTSCG
T ss_pred HHHHHHHHHhcCC---CCcCEEEEECCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHhc-cCCCeEEEECchhhCCc
Confidence 4555566666654 5788999999999999999999864 99999999999998877764 45789999999999988
Q ss_pred CCCcccEEEeccccc
Q 006149 131 MDETFDVILDKGGLD 145 (659)
Q Consensus 131 ~~~sFDvVi~~g~l~ 145 (659)
++.+||+|+++..++
T Consensus 111 ~~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 111 NKLDFNKVVANLPYQ 125 (295)
T ss_dssp GGSCCSEEEEECCGG
T ss_pred ccCCccEEEEeCccc
Confidence 888899999875554
No 265
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.79 E-value=2.5e-08 Score=108.45 Aligned_cols=123 Identities=22% Similarity=0.264 Sum_probs=90.1
Q ss_pred cccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc--CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEe
Q 006149 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVM 123 (659)
Q Consensus 46 wy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~--g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~ 123 (659)
.|.....+...+.+++.. .++.+|||+|||+|.++..+++. ...+|+|+|+++.+++.+ .++.++++
T Consensus 20 ~~~TP~~l~~~~~~~~~~---~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a--------~~~~~~~~ 88 (421)
T 2ih2_A 20 RVETPPEVVDFMVSLAEA---PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP--------PWAEGILA 88 (421)
T ss_dssp -CCCCHHHHHHHHHHCCC---CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC--------TTEEEEES
T ss_pred eEeCCHHHHHHHHHhhcc---CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC--------CCCcEEeC
Confidence 344456677777787753 35679999999999999999875 346999999999777543 57899999
Q ss_pred ecCCCCCCCCcccEEEecccccccCCc--------ccch--------------HHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 124 DMTSMQFMDETFDVILDKGGLDALMEP--------ELGH--------------KLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 124 D~~~l~~~~~sFDvVi~~g~l~~l~~~--------~~~~--------------~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
|+.+... .++||+|+++..+...... +... .....+++.+.++|+|||+++++...
T Consensus 89 D~~~~~~-~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 89 DFLLWEP-GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp CGGGCCC-SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred ChhhcCc-cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 9988653 4789999997554432220 1000 01336799999999999999998864
No 266
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.78 E-value=2.5e-08 Score=103.59 Aligned_cols=102 Identities=14% Similarity=0.065 Sum_probs=73.0
Q ss_pred CCCCeEEEECC------CcchHHHHHHHc-C-CCeEEEEcCCHHHHHHHHHHhhcCCCCcEE-EEeecCCCCCCCCcccE
Q 006149 67 SPPPQILVPGC------GNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDRSDMRW-RVMDMTSMQFMDETFDV 137 (659)
Q Consensus 67 ~~~~~ILDiGC------G~G~~s~~La~~-g-~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~-~~~D~~~l~~~~~sFDv 137 (659)
.++.+|||+|| |+|. ..+++. + ...|+|+|+|+. . +++++ +++|+.+++++ ++||+
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v----~~v~~~i~gD~~~~~~~-~~fD~ 126 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V----SDADSTLIGDCATVHTA-NKWDL 126 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B----CSSSEEEESCGGGCCCS-SCEEE
T ss_pred CCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C----CCCEEEEECccccCCcc-CcccE
Confidence 57889999999 4466 334433 4 358999999995 1 46889 99999998765 78999
Q ss_pred EEeccccccc----CCcccchHHHHHHHHHHHhccccCeEEEEEEcCCch
Q 006149 138 ILDKGGLDAL----MEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (659)
Q Consensus 138 Vi~~g~l~~l----~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~ 183 (659)
|++....... .+..........+++++.++|||||+|++..+....
T Consensus 127 Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~ 176 (290)
T 2xyq_A 127 IISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW 176 (290)
T ss_dssp EEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC
T ss_pred EEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 9987542211 111111223668999999999999999998765443
No 267
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.75 E-value=5.5e-08 Score=106.74 Aligned_cols=132 Identities=8% Similarity=0.131 Sum_probs=88.4
Q ss_pred HHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCC----
Q 006149 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTS---- 127 (659)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~---- 127 (659)
+...+.+++.. .++.+|||+|||+|.++..|+..+ .+|+|+|+|+.+++.+++.+...+ .+++|+++|+.+
T Consensus 274 l~~~~~~~l~~---~~~~~VLDlgcG~G~~~~~la~~~-~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~ 349 (433)
T 1uwv_A 274 MVARALEWLDV---QPEDRVLDLFCGMGNFTLPLATQA-ASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTK 349 (433)
T ss_dssp HHHHHHHHHTC---CTTCEEEEESCTTTTTHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSS
T ss_pred HHHHHHHhhcC---CCCCEEEECCCCCCHHHHHHHhhC-CEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhh
Confidence 33445555543 467899999999999999999885 499999999999999877765444 579999999988
Q ss_pred CCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCchhhcchhhhhccCceEEE
Q 006149 128 MQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKMSV 200 (659)
Q Consensus 128 l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~~~~~l~~~~~~~w~~~~ 200 (659)
+++++++||+|++...... ...+++.+.+ ++|++.+++.. ....+...+......+|.+..
T Consensus 350 ~~~~~~~fD~Vv~dPPr~g----------~~~~~~~l~~-~~p~~ivyvsc-~p~tlard~~~l~~~Gy~~~~ 410 (433)
T 1uwv_A 350 QPWAKNGFDKVLLDPARAG----------AAGVMQQIIK-LEPIRIVYVSC-NPATLARDSEALLKAGYTIAR 410 (433)
T ss_dssp SGGGTTCCSEEEECCCTTC----------CHHHHHHHHH-HCCSEEEEEES-CHHHHHHHHHHHHHTTCEEEE
T ss_pred hhhhcCCCCEEEECCCCcc----------HHHHHHHHHh-cCCCeEEEEEC-ChHHHHhhHHHHHHCCcEEEE
Confidence 3456678999997433221 1234444443 68887766643 323333322222234666543
No 268
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.75 E-value=4.8e-08 Score=106.94 Aligned_cols=99 Identities=16% Similarity=0.156 Sum_probs=75.7
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEecccccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~ 146 (659)
.++.+|||+|||+|.++..|++.+. +|+|+|+|+.+++.+++.+...+..++|+++|+.++.. .+||+|++......
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~~~-~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~--~~fD~Vv~dPPr~g 365 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKRGF-NVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSV--KGFDTVIVDPPRAG 365 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCC--TTCSEEEECCCTTC
T ss_pred CCCCEEEEeeccchHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCc--cCCCEEEEcCCccc
Confidence 3578999999999999999998865 99999999999999877665444339999999998742 28999998543221
Q ss_pred cCCcccchHHHHHHHHHHHhccccCeEEEEEE
Q 006149 147 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (659)
Q Consensus 147 l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~ 178 (659)
+ ...+++.+. .|+|||++++..
T Consensus 366 ~---------~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 366 L---------HPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp S---------CHHHHHHHH-HHCCSEEEEEES
T ss_pred h---------HHHHHHHHH-hcCCCcEEEEEC
Confidence 1 113555554 599999888764
No 269
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.74 E-value=1.9e-10 Score=116.42 Aligned_cols=114 Identities=14% Similarity=0.188 Sum_probs=82.2
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCC
Q 006149 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFM 131 (659)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~ 131 (659)
.....+.+.+.. .++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.++++.. ..++++++++|+.+++++
T Consensus 16 ~~~~~i~~~~~~---~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~-~~~~v~~~~~D~~~~~~~ 90 (245)
T 1yub_A 16 KVLNQIIKQLNL---KETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLK-LNTRVTLIHQDILQFQFP 90 (245)
T ss_dssp TTHHHHHHHCCC---CSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTT-TCSEEEECCSCCTTTTCC
T ss_pred HHHHHHHHhcCC---CCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhc-cCCceEEEECChhhcCcc
Confidence 444556666654 567899999999999999999987 599999999988876644432 346799999999998876
Q ss_pred C-CcccEEEecccccc-----------cCCcccchHHHHHHH----HHHHhccccCeEEEEEE
Q 006149 132 D-ETFDVILDKGGLDA-----------LMEPELGHKLGNQYL----SEVKRLLKSGGKFVCLT 178 (659)
Q Consensus 132 ~-~sFDvVi~~g~l~~-----------l~~~~~~~~~~~~~l----~ei~rvLkpGG~lvi~~ 178 (659)
+ ++| .|+++...+. ..... .++ +.+.|+|+|||+++++.
T Consensus 91 ~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~-------~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 91 NKQRY-KIVGNIPYHLSTQIIKKVVFESRASD-------IYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp CSSEE-EEEEECCSSSCHHHHHHHHHHCCCEE-------EEEEEESSHHHHHHCGGGSHHHHT
T ss_pred cCCCc-EEEEeCCccccHHHHHHHHhCCCCCe-------EEEEeeHHHHHHHhCCCCchhhhh
Confidence 4 688 6666533221 11111 234 66899999999876654
No 270
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.67 E-value=1.4e-07 Score=96.24 Aligned_cols=86 Identities=10% Similarity=0.212 Sum_probs=69.3
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCC
Q 006149 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQF 130 (659)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~ 130 (659)
+.+...+.+.+.. .++.+|||||||+|.++..|++.+ .+|+++|+++.+++.++++... .++++++++|+.++++
T Consensus 15 ~~i~~~iv~~~~~---~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~-~~~v~~i~~D~~~~~~ 89 (255)
T 3tqs_A 15 SFVLQKIVSAIHP---QKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQ-QKNITIYQNDALQFDF 89 (255)
T ss_dssp HHHHHHHHHHHCC---CTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTT-CTTEEEEESCTTTCCG
T ss_pred HHHHHHHHHhcCC---CCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhh-CCCcEEEEcchHhCCH
Confidence 3455566677654 578899999999999999999987 5999999999999988777643 5789999999999876
Q ss_pred CC----CcccEEEecc
Q 006149 131 MD----ETFDVILDKG 142 (659)
Q Consensus 131 ~~----~sFDvVi~~g 142 (659)
++ ++|| |+++-
T Consensus 90 ~~~~~~~~~~-vv~Nl 104 (255)
T 3tqs_A 90 SSVKTDKPLR-VVGNL 104 (255)
T ss_dssp GGSCCSSCEE-EEEEC
T ss_pred HHhccCCCeE-EEecC
Confidence 53 5688 55543
No 271
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.63 E-value=3.2e-07 Score=92.78 Aligned_cols=86 Identities=14% Similarity=0.220 Sum_probs=66.2
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCC
Q 006149 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFM 131 (659)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~ 131 (659)
.+...+.+.+.. .++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.++++.. ..++++++++|+.+++++
T Consensus 17 ~~~~~i~~~~~~---~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~-~~~~v~~~~~D~~~~~~~ 91 (244)
T 1qam_A 17 HNIDKIMTNIRL---NEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLV-DHDNFQVLNKDILQFKFP 91 (244)
T ss_dssp HHHHHHHTTCCC---CTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTT-TCCSEEEECCCGGGCCCC
T ss_pred HHHHHHHHhCCC---CCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhc-cCCCeEEEEChHHhCCcc
Confidence 344445555543 567899999999999999999987 499999999999998876653 346899999999999876
Q ss_pred C-CcccEEEeccc
Q 006149 132 D-ETFDVILDKGG 143 (659)
Q Consensus 132 ~-~sFDvVi~~g~ 143 (659)
+ ..| .|+++-.
T Consensus 92 ~~~~~-~vv~nlP 103 (244)
T 1qam_A 92 KNQSY-KIFGNIP 103 (244)
T ss_dssp SSCCC-EEEEECC
T ss_pred cCCCe-EEEEeCC
Confidence 4 456 4554433
No 272
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.62 E-value=1.7e-07 Score=101.25 Aligned_cols=122 Identities=13% Similarity=0.160 Sum_probs=89.9
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCC---------------------------------------C
Q 006149 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF---------------------------------------H 92 (659)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~---------------------------------------~ 92 (659)
.+...+..+... .++..|||++||+|.++..++..+. .
T Consensus 181 ~LAaall~l~~~---~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 257 (384)
T 3ldg_A 181 NMAAAIILLSNW---FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQL 257 (384)
T ss_dssp HHHHHHHHHTTC---CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCC
T ss_pred HHHHHHHHHhCC---CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCc
Confidence 455555665554 5678999999999999988876422 3
Q ss_pred eEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhcccc
Q 006149 93 GITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKS 170 (659)
Q Consensus 93 ~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkp 170 (659)
+|+|+|+++.+++.+++.....+ ..+++.++|+.+++.+ .+||+|+++..+..-.... .....+...+.+.||+
T Consensus 258 ~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~---~~l~~ly~~lg~~lk~ 333 (384)
T 3ldg_A 258 DISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDD---KAVDILYNEMGETFAP 333 (384)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCH---HHHHHHHHHHHHHHTT
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCH---HHHHHHHHHHHHHHhh
Confidence 59999999999998877765554 3599999999998765 5899999986654322211 1255666667777765
Q ss_pred --CeEEEEEEcC
Q 006149 171 --GGKFVCLTLA 180 (659)
Q Consensus 171 --GG~lvi~~~~ 180 (659)
||.+++++..
T Consensus 334 ~~g~~~~iit~~ 345 (384)
T 3ldg_A 334 LKTWSQFILTND 345 (384)
T ss_dssp CTTSEEEEEESC
T ss_pred CCCcEEEEEECC
Confidence 9999988864
No 273
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.62 E-value=1e-07 Score=103.29 Aligned_cols=122 Identities=16% Similarity=0.191 Sum_probs=88.0
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCC---------------------------------------C
Q 006149 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF---------------------------------------H 92 (659)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~---------------------------------------~ 92 (659)
.+...+..+... .++..|||++||+|.++..++..+. .
T Consensus 188 ~lAa~ll~l~~~---~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 264 (393)
T 3k0b_A 188 TMAAALVLLTSW---HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPL 264 (393)
T ss_dssp HHHHHHHHHSCC---CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCC
T ss_pred HHHHHHHHHhCC---CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCc
Confidence 444555555554 5678999999999999988876532 3
Q ss_pred eEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhcccc
Q 006149 93 GITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKS 170 (659)
Q Consensus 93 ~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkp 170 (659)
.|+|+|+++.+++.+++.+...+ ..+++.++|+.+++.+ ++||+|+++..+..-... ......+...+.+.||+
T Consensus 265 ~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~---~~~l~~ly~~lg~~lk~ 340 (393)
T 3k0b_A 265 NIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLED---EEAVRQLYREMGIVYKR 340 (393)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHH---HHHHHHHHHHHHHHHHT
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCC---chhHHHHHHHHHHHHhc
Confidence 59999999999999887765554 3599999999998765 589999988654321111 11244566666666665
Q ss_pred --CeEEEEEEcC
Q 006149 171 --GGKFVCLTLA 180 (659)
Q Consensus 171 --GG~lvi~~~~ 180 (659)
||.+++++..
T Consensus 341 ~~g~~~~iit~~ 352 (393)
T 3k0b_A 341 MPTWSVYVLTSY 352 (393)
T ss_dssp CTTCEEEEEECC
T ss_pred CCCCEEEEEECC
Confidence 9999888864
No 274
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.61 E-value=9.7e-08 Score=103.21 Aligned_cols=122 Identities=16% Similarity=0.154 Sum_probs=89.5
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCC---------------------------------------C
Q 006149 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF---------------------------------------H 92 (659)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~---------------------------------------~ 92 (659)
.+...+..+... .++..|||+|||+|.++..++..+. .
T Consensus 182 ~lAa~ll~~~~~---~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 258 (385)
T 3ldu_A 182 TLAAGLIYLTPW---KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKF 258 (385)
T ss_dssp HHHHHHHHTSCC---CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCC
T ss_pred HHHHHHHHhhCC---CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCc
Confidence 344555555543 5678999999999999988876531 3
Q ss_pred eEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhcccc
Q 006149 93 GITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKS 170 (659)
Q Consensus 93 ~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkp 170 (659)
+|+|+|+++.+++.+++.+...+ ..+++.++|+.+++.+ ++||+|+++..+..-... ......+..++.++|++
T Consensus 259 ~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~---~~~l~~ly~~lg~~lk~ 334 (385)
T 3ldu_A 259 KIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLED---KDSVKQLYKELGYAFRK 334 (385)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHH---HHHHHHHHHHHHHHHHT
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCC---HHHHHHHHHHHHHHHhh
Confidence 69999999999998877765544 3699999999998764 589999998765422111 12255677777777776
Q ss_pred --CeEEEEEEcC
Q 006149 171 --GGKFVCLTLA 180 (659)
Q Consensus 171 --GG~lvi~~~~ 180 (659)
||.+++++..
T Consensus 335 ~~g~~~~iit~~ 346 (385)
T 3ldu_A 335 LKNWSYYLITSY 346 (385)
T ss_dssp SBSCEEEEEESC
T ss_pred CCCCEEEEEECC
Confidence 8898888864
No 275
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.60 E-value=1e-07 Score=102.29 Aligned_cols=113 Identities=11% Similarity=0.152 Sum_probs=81.9
Q ss_pred HHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCC--
Q 006149 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ-- 129 (659)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~-- 129 (659)
+...+.+++.. .+.+|||+|||+|.++..++.. ..+|+++|+++.+++.+++.+...+ .+++++++|+.+..
T Consensus 202 l~~~~~~~~~~----~~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~ 276 (369)
T 3bt7_A 202 MLEWALDVTKG----SKGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQA 276 (369)
T ss_dssp HHHHHHHHTTT----CCSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHH
T ss_pred HHHHHHHHhhc----CCCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHH
Confidence 33445555543 3578999999999999999875 4599999999999998877665544 58999999987752
Q ss_pred CCC--------------CcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCch
Q 006149 130 FMD--------------ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (659)
Q Consensus 130 ~~~--------------~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~ 183 (659)
+.. .+||+|+....-. .+..++.+.|+++|+++.++.....
T Consensus 277 ~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~-------------g~~~~~~~~l~~~g~ivyvsc~p~t 331 (369)
T 3bt7_A 277 MNGVREFNRLQGIDLKSYQCETIFVDPPRS-------------GLDSETEKMVQAYPRILYISCNPET 331 (369)
T ss_dssp HSSCCCCTTGGGSCGGGCCEEEEEECCCTT-------------CCCHHHHHHHTTSSEEEEEESCHHH
T ss_pred HhhccccccccccccccCCCCEEEECcCcc-------------ccHHHHHHHHhCCCEEEEEECCHHH
Confidence 221 3799998532211 2345566777899999999876443
No 276
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.56 E-value=1.4e-07 Score=96.94 Aligned_cols=89 Identities=10% Similarity=0.053 Sum_probs=71.8
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCC
Q 006149 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQF 130 (659)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~ 130 (659)
+.+...+.+.+.. .++ +|||||||+|.++..|++.+. +|+++|+++.+++.++++.. ..+++++++|+.++++
T Consensus 33 ~~i~~~Iv~~~~~---~~~-~VLEIG~G~G~lt~~L~~~~~-~V~avEid~~~~~~l~~~~~--~~~v~vi~~D~l~~~~ 105 (271)
T 3fut_A 33 EAHLRRIVEAARP---FTG-PVFEVGPGLGALTRALLEAGA-EVTAIEKDLRLRPVLEETLS--GLPVRLVFQDALLYPW 105 (271)
T ss_dssp HHHHHHHHHHHCC---CCS-CEEEECCTTSHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTT--TSSEEEEESCGGGSCG
T ss_pred HHHHHHHHHhcCC---CCC-eEEEEeCchHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcC--CCCEEEEECChhhCCh
Confidence 3455566666654 567 999999999999999999984 89999999999998877764 3689999999999887
Q ss_pred CCC-cccEEEecccccc
Q 006149 131 MDE-TFDVILDKGGLDA 146 (659)
Q Consensus 131 ~~~-sFDvVi~~g~l~~ 146 (659)
++. .||.|+++-..+.
T Consensus 106 ~~~~~~~~iv~NlPy~i 122 (271)
T 3fut_A 106 EEVPQGSLLVANLPYHI 122 (271)
T ss_dssp GGSCTTEEEEEEECSSC
T ss_pred hhccCccEEEecCcccc
Confidence 643 6899888755443
No 277
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.56 E-value=1.2e-07 Score=100.73 Aligned_cols=113 Identities=15% Similarity=0.168 Sum_probs=80.4
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcC------C---CCcEEEEeecCCCCC----CCCc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRD------R---SDMRWRVMDMTSMQF----MDET 134 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~------~---~~i~~~~~D~~~l~~----~~~s 134 (659)
.+.+||+||||+|..+..+++++..+|++||+++.+++.+++.+... . ++++++.+|+.+.-- .+++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 56899999999999999999887678999999999999887765321 1 279999999988531 3578
Q ss_pred ccEEEecccc-cccCCcc--cchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 135 FDVILDKGGL-DALMEPE--LGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 135 FDvVi~~g~l-~~l~~~~--~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
||+|+....- ..-..+. ....-.+.+++.+.++|+|||++++...+
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 9999975432 1000110 00111344444459999999999987654
No 278
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.54 E-value=5.5e-07 Score=94.40 Aligned_cols=120 Identities=16% Similarity=0.102 Sum_probs=84.5
Q ss_pred HHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc--CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCCCC-
Q 006149 57 LISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQFMD- 132 (659)
Q Consensus 57 l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~--g~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~~~- 132 (659)
+..++.. .++.+|||+|||+|..+..++.. +.+.|+++|+++.+++.++++....+ .++.++++|+.+++...
T Consensus 94 ~~~~l~~---~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~ 170 (309)
T 2b9e_A 94 PAMLLDP---PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDP 170 (309)
T ss_dssp HHHHHCC---CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCG
T ss_pred HHHHhCC---CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCcccc
Confidence 4445543 57889999999999999999885 34689999999999998887776544 57999999998875332
Q ss_pred --CcccEEEec------ccccccCCc--------ccch---HHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 133 --ETFDVILDK------GGLDALMEP--------ELGH---KLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 133 --~sFDvVi~~------g~l~~l~~~--------~~~~---~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
++||.|++. |++..-++. +.-. ....++|..+.++|+ ||+++..+.+
T Consensus 171 ~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs 236 (309)
T 2b9e_A 171 RYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCS 236 (309)
T ss_dssp GGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESC
T ss_pred ccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCC
Confidence 579999963 223221110 0000 113467888888887 9999988765
No 279
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.50 E-value=4.5e-07 Score=92.10 Aligned_cols=76 Identities=8% Similarity=0.176 Sum_probs=61.8
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCC
Q 006149 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQF 130 (659)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~ 130 (659)
+.+...+.+.+.. .++.+|||+|||+|.++..|++.+..+|+++|+++.+++.++++ ...+++++++|+.++++
T Consensus 17 ~~i~~~iv~~~~~---~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~---~~~~v~~i~~D~~~~~~ 90 (249)
T 3ftd_A 17 EGVLKKIAEELNI---EEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI---GDERLEVINEDASKFPF 90 (249)
T ss_dssp HHHHHHHHHHTTC---CTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS---CCTTEEEECSCTTTCCG
T ss_pred HHHHHHHHHhcCC---CCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc---cCCCeEEEEcchhhCCh
Confidence 3455556666654 56789999999999999999998656999999999999877544 34689999999999987
Q ss_pred CC
Q 006149 131 MD 132 (659)
Q Consensus 131 ~~ 132 (659)
++
T Consensus 91 ~~ 92 (249)
T 3ftd_A 91 CS 92 (249)
T ss_dssp GG
T ss_pred hH
Confidence 64
No 280
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.49 E-value=6.1e-07 Score=91.34 Aligned_cols=147 Identities=14% Similarity=0.067 Sum_probs=90.1
Q ss_pred CCCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHh-hcCCCCcEEEEeecCCCCCCCCcccEEEeccc
Q 006149 66 SSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRN-VRDRSDMRWRVMDMTSMQFMDETFDVILDKGG 143 (659)
Q Consensus 66 ~~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~-~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~ 143 (659)
..++.+|||+|||+|.++..+++. +...++++|++..+. +.... ...+.++.+...++....+++++||+|++..+
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~--~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~a 149 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGH--EKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIG 149 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTC--CCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCc--ccccccCcCCCCeEEEeccceehhcCCCCccEEEecCc
Confidence 357789999999999999988876 556788999884221 00000 00112566677777666777889999999876
Q ss_pred ccccCCcccchHHHHHHHHHHHhccccC-eEEEEEEcC--CchhhcchhhhhccCceEEEeeeCCCCCCCCCCccEEE
Q 006149 144 LDALMEPELGHKLGNQYLSEVKRLLKSG-GKFVCLTLA--ESHVLGLLFPKFRFGWKMSVHAIPQKSSSEPSLQTFMV 218 (659)
Q Consensus 144 l~~l~~~~~~~~~~~~~l~ei~rvLkpG-G~lvi~~~~--~~~~~~~l~~~~~~~w~~~~~~i~~~~~~~~~l~~f~~ 218 (659)
.+ ......+......+|+.+.++|+|| |.|++-.+. .+.+ ..++..++..|..-...-+ +......+.|++
T Consensus 150 pn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~-~~l~~~lk~~F~~V~~~KP--aSR~~S~E~Y~V 223 (277)
T 3evf_A 150 ES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMPDV-LEKLELLQRRFGGTVIRNP--LSRNSTHEMYYV 223 (277)
T ss_dssp CC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHH-HHHHHHHHHHHCCEEECCT--TSCTTCCCEEEE
T ss_pred cC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCccH-HHHHHHHHHhcCCEEEEeC--CCCCCCCceEEE
Confidence 66 3332211111223588999999999 999997776 3333 2344444443333332333 333344455544
No 281
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.41 E-value=3.7e-07 Score=98.39 Aligned_cols=100 Identities=14% Similarity=0.034 Sum_probs=76.8
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcC---------------C-CCcEEEEeecCCCCC
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRD---------------R-SDMRWRVMDMTSMQF 130 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~---------------~-~~i~~~~~D~~~l~~ 130 (659)
++.+|||+|||+|..+..++.. +..+|+++|+++.+++.+++..... + .+++++++|+.++..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 3679999999999999999987 5568999999999999887665444 3 238999999877521
Q ss_pred -CCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEE
Q 006149 131 -MDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (659)
Q Consensus 131 -~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~ 178 (659)
..+.||+|+... .... ..++..+.+.|++||.+++..
T Consensus 127 ~~~~~fD~I~lDP----~~~~-------~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDP----FGSP-------MEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECC----SSCC-------HHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCC----CCCH-------HHHHHHHHHhcCCCCEEEEEe
Confidence 135799999432 1111 378999999999999776654
No 282
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.39 E-value=2.1e-06 Score=96.74 Aligned_cols=174 Identities=8% Similarity=0.022 Sum_probs=108.8
Q ss_pred chhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc----C---------------CCeEEEEcCCHHHHHHHHH
Q 006149 49 EWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA----G---------------FHGITNVDFSKVVISDMLR 109 (659)
Q Consensus 49 ~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~----g---------------~~~VtgvD~S~~~i~~~~~ 109 (659)
....+...+.+++.. .++.+|||+|||+|.++..+++. + ..+++|+|+++.++..++.
T Consensus 153 TP~~iv~~mv~~l~p---~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~ 229 (541)
T 2ar0_A 153 TPRPLIKTIIHLLKP---QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALM 229 (541)
T ss_dssp CCHHHHHHHHHHHCC---CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHH
T ss_pred CCHHHHHHHHHHhcc---CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHH
Confidence 445666777777764 56789999999999998877653 1 1379999999999987765
Q ss_pred HhhcCC-CC-----cEEEEeecCCCC-CCCCcccEEEecccccccCCcc--c-----chHHHHHHHHHHHhccccCeEEE
Q 006149 110 RNVRDR-SD-----MRWRVMDMTSMQ-FMDETFDVILDKGGLDALMEPE--L-----GHKLGNQYLSEVKRLLKSGGKFV 175 (659)
Q Consensus 110 ~~~~~~-~~-----i~~~~~D~~~l~-~~~~sFDvVi~~g~l~~l~~~~--~-----~~~~~~~~l~ei~rvLkpGG~lv 175 (659)
.....+ .. +.+.++|....+ ...++||+|+++..+....... . ....-..++..+.+.|+|||+++
T Consensus 230 nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a 309 (541)
T 2ar0_A 230 NCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAA 309 (541)
T ss_dssp HHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEE
T ss_pred HHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEE
Confidence 544333 32 788999987653 3457899999987665432210 0 00112378999999999999999
Q ss_pred EEEcCC----chhhcchhhhh-ccCceEEEeeeCCCCCCCCCCccEEEEEEecCC
Q 006149 176 CLTLAE----SHVLGLLFPKF-RFGWKMSVHAIPQKSSSEPSLQTFMVVADKENS 225 (659)
Q Consensus 176 i~~~~~----~~~~~~l~~~~-~~~w~~~~~~i~~~~~~~~~l~~f~~v~~k~~~ 225 (659)
++.... ......+...+ ..++...+..++...=.....+..+++.+|.+.
T Consensus 310 ~V~p~~~L~~~~~~~~iR~~L~~~~~l~~ii~Lp~~~F~~t~v~t~Ilvl~k~~~ 364 (541)
T 2ar0_A 310 VVVPDNVLFEGGKGTDIRRDLMDKCHLHTILRLPTGIFYAQGVKTNVLFFTKGTV 364 (541)
T ss_dssp EEEEHHHHHCCTHHHHHHHHHHHHEEEEEEEECCSSCSSSCSCCEEEEEEEEBCS
T ss_pred EEecCcceecCcHHHHHHHHHhhcCCEEEEEEcCcCcccCCCCcEEEEEEECCCC
Confidence 887531 11001121211 123333344444321112345567777777554
No 283
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.38 E-value=4.3e-07 Score=94.78 Aligned_cols=88 Identities=15% Similarity=0.094 Sum_probs=69.8
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcC-CCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCC
Q 006149 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ 129 (659)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g-~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~ 129 (659)
+.+...+.+++.. .++.+|||+|||+|..+..+++.. ..+|+|+|+|+.+++.++++....+.+++++++|+.+++
T Consensus 12 pvLl~e~l~~L~~---~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~ 88 (301)
T 1m6y_A 12 PVMVREVIEFLKP---EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREAD 88 (301)
T ss_dssp CTTHHHHHHHHCC---CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHH
T ss_pred HHHHHHHHHhcCC---CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHH
Confidence 3455556677754 578899999999999999999873 459999999999999998877554578999999998875
Q ss_pred --CC---CCcccEEEec
Q 006149 130 --FM---DETFDVILDK 141 (659)
Q Consensus 130 --~~---~~sFDvVi~~ 141 (659)
+. .++||.|+..
T Consensus 89 ~~l~~~g~~~~D~Vl~D 105 (301)
T 1m6y_A 89 FLLKTLGIEKVDGILMD 105 (301)
T ss_dssp HHHHHTTCSCEEEEEEE
T ss_pred HHHHhcCCCCCCEEEEc
Confidence 22 1579999854
No 284
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.38 E-value=1.3e-06 Score=90.18 Aligned_cols=74 Identities=14% Similarity=0.178 Sum_probs=61.2
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCe----EEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCC
Q 006149 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHG----ITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTS 127 (659)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~----VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~ 127 (659)
.+...+.+.+.. .++.+|||||||+|.++..|++.+. . |+++|+++.+++.++++. ..+++++++|+.+
T Consensus 29 ~i~~~iv~~~~~---~~~~~VLEIG~G~G~lt~~La~~~~-~~~~~V~avDid~~~l~~a~~~~---~~~v~~i~~D~~~ 101 (279)
T 3uzu_A 29 GVIDAIVAAIRP---ERGERMVEIGPGLGALTGPVIARLA-TPGSPLHAVELDRDLIGRLEQRF---GELLELHAGDALT 101 (279)
T ss_dssp HHHHHHHHHHCC---CTTCEEEEECCTTSTTHHHHHHHHC-BTTBCEEEEECCHHHHHHHHHHH---GGGEEEEESCGGG
T ss_pred HHHHHHHHhcCC---CCcCEEEEEccccHHHHHHHHHhCC-CcCCeEEEEECCHHHHHHHHHhc---CCCcEEEECChhc
Confidence 455556666654 5788999999999999999998864 4 999999999999887763 5679999999999
Q ss_pred CCCCC
Q 006149 128 MQFMD 132 (659)
Q Consensus 128 l~~~~ 132 (659)
+++++
T Consensus 102 ~~~~~ 106 (279)
T 3uzu_A 102 FDFGS 106 (279)
T ss_dssp CCGGG
T ss_pred CChhH
Confidence 88653
No 285
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.33 E-value=7.6e-06 Score=92.14 Aligned_cols=178 Identities=10% Similarity=0.044 Sum_probs=111.3
Q ss_pred ccccccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc--------C--------CCeEEEEcCCHHHHHH
Q 006149 43 SFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--------G--------FHGITNVDFSKVVISD 106 (659)
Q Consensus 43 ~fewy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~--------g--------~~~VtgvD~S~~~i~~ 106 (659)
...-|.....+...+.+++.. .+ .+|||++||+|.+...+++. + ..+++|+|+++.++..
T Consensus 223 ~~G~fyTP~~Vv~lmv~ll~p---~~-~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~l 298 (544)
T 3khk_A 223 QGGQYYTPKSIVTLIVEMLEP---YK-GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKL 298 (544)
T ss_dssp CSTTTCCCHHHHHHHHHHHCC---CS-EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHH
T ss_pred cCCeEeCCHHHHHHHHHHHhc---CC-CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHH
Confidence 334445567788888888864 33 49999999999998776432 0 2379999999999987
Q ss_pred HHHHhhcCCC--CcEEEEeecCCCC-CCCCcccEEEeccccccc--CC---------------------cccchHHHHHH
Q 006149 107 MLRRNVRDRS--DMRWRVMDMTSMQ-FMDETFDVILDKGGLDAL--ME---------------------PELGHKLGNQY 160 (659)
Q Consensus 107 ~~~~~~~~~~--~i~~~~~D~~~l~-~~~~sFDvVi~~g~l~~l--~~---------------------~~~~~~~~~~~ 160 (659)
++......+. ++.+.++|....+ +.+.+||+|+++..+..- .. +.... .--.+
T Consensus 299 A~~Nl~l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~-~~~~F 377 (544)
T 3khk_A 299 AAMNMVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGN-ANFAW 377 (544)
T ss_dssp HHHHHHHTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTC-THHHH
T ss_pred HHHHHHHhCCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcc-hhHHH
Confidence 7655444432 3444778876654 456799999998665431 00 00000 01258
Q ss_pred HHHHHhccccCeEEEEEEcCCchh-----hcchhhhh-ccCceEEEeeeCCCCCCCCCCccEEEEEEecCC
Q 006149 161 LSEVKRLLKSGGKFVCLTLAESHV-----LGLLFPKF-RFGWKMSVHAIPQKSSSEPSLQTFMVVADKENS 225 (659)
Q Consensus 161 l~ei~rvLkpGG~lvi~~~~~~~~-----~~~l~~~~-~~~w~~~~~~i~~~~~~~~~l~~f~~v~~k~~~ 225 (659)
+..+.+.|+|||+++++....--. ...+-+.+ ..++...+..++...=.....+..+++.+|.+.
T Consensus 378 l~~~l~~Lk~gGr~aiVlP~g~L~~~~~~~~~iRk~Lle~~~l~aII~LP~~lF~~t~i~t~Ilvl~K~k~ 448 (544)
T 3khk_A 378 MLHMLYHLAPTGSMALLLANGSMSSNTNNEGEIRKTLVEQDLVECMVALPGQLFTNTQIPACIWFLTKDKN 448 (544)
T ss_dssp HHHHHHTEEEEEEEEEEEETHHHHCCGGGHHHHHHHHHHTTCEEEEEECCTTBCCSCSSCEEEEEEESCCS
T ss_pred HHHHHHHhccCceEEEEecchhhhcCcchHHHHHHHHHhCCcHhEEEECCCCCCCCCCCCeEEEEEecCCC
Confidence 999999999999998887531101 11122222 234555566665321123456678888887664
No 286
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.31 E-value=8.5e-07 Score=95.81 Aligned_cols=100 Identities=14% Similarity=0.083 Sum_probs=77.7
Q ss_pred CCCeEEEECCCcchHHHHHHHc--CCCeEEEEcCCHHHHHHHHHHhhcCC-CC--cEEEEeecCCCC--CCCCcccEEEe
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR-SD--MRWRVMDMTSMQ--FMDETFDVILD 140 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~--g~~~VtgvD~S~~~i~~~~~~~~~~~-~~--i~~~~~D~~~l~--~~~~sFDvVi~ 140 (659)
++.+|||++||+|.++..++.. |...|+++|+++.+++.+++.....+ .+ ++++++|+.+.- ...+.||+|+.
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 4689999999999999999885 44689999999999998877665555 33 899999987642 12468999997
Q ss_pred cccccccCCcccchHHHHHHHHHHHhccccCeEEEEEE
Q 006149 141 KGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (659)
Q Consensus 141 ~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~ 178 (659)
.. .... ..++..+.+.|++||++++..
T Consensus 132 DP----~g~~-------~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 132 DP----FGTP-------VPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp CC----SSCC-------HHHHHHHHHHEEEEEEEEEEE
T ss_pred CC----CcCH-------HHHHHHHHHHhCCCCEEEEEe
Confidence 54 1111 268889999999999776655
No 287
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.30 E-value=6e-07 Score=91.55 Aligned_cols=148 Identities=11% Similarity=0.088 Sum_probs=88.7
Q ss_pred CCCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEecccc
Q 006149 66 SSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGL 144 (659)
Q Consensus 66 ~~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l 144 (659)
..++.+|||+|||+|.++..+++. +...|+|+|++..+...... ....+.++.+...++....++.+.+|+|++..+.
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~-~~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDmAp 166 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIM-RTTLGWNLIRFKDKTDVFNMEVIPGDTLLCDIGE 166 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTTGGGEEEECSCCGGGSCCCCCSEEEECCCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccc-cccCCCceEEeeCCcchhhcCCCCcCEEEecCcc
Confidence 357789999999999999988854 66689999998642111100 0011224444554443344567899999998777
Q ss_pred cccCCcccchHHHHHHHHHHHhccccC--eEEEEEEcC--CchhhcchhhhhccCceEEEeeeCCCCCCCCCCccEEE
Q 006149 145 DALMEPELGHKLGNQYLSEVKRLLKSG--GKFVCLTLA--ESHVLGLLFPKFRFGWKMSVHAIPQKSSSEPSLQTFMV 218 (659)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~ei~rvLkpG--G~lvi~~~~--~~~~~~~l~~~~~~~w~~~~~~i~~~~~~~~~l~~f~~ 218 (659)
+ ......+......+|.-+.++|+|| |.|++-.+. .+.+. .++..++..|..-...-+ +......+.|++
T Consensus 167 n-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg~~~~-~l~~~lk~~F~~V~~~KP--aSR~~S~E~Y~V 240 (282)
T 3gcz_A 167 S-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYTPLIM-EELSRLQLKHGGGLVRVP--LSRNSTHEMYWV 240 (282)
T ss_dssp C-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCSHHHH-HHHHHHHHHHCCEEECCT--TSCTTCCCEEEE
T ss_pred C-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCCccHH-HHHHHHHHhcCCEEEEcC--CCcccCcceeEE
Confidence 7 4332222222234588889999999 999998887 44432 344444443333332333 333444455544
No 288
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.29 E-value=6.7e-07 Score=96.95 Aligned_cols=74 Identities=8% Similarity=-0.129 Sum_probs=61.0
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcC--C-CCcEEEEeecCCC-CC-CCCcccEEEecc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRD--R-SDMRWRVMDMTSM-QF-MDETFDVILDKG 142 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~--~-~~i~~~~~D~~~l-~~-~~~sFDvVi~~g 142 (659)
++.+|||+|||+|..+..|+..+. +|+++|+|+.+++.+++..... + .+++++++|+.+. +. ++++||+|++..
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~-~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lDP 171 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKAS-QGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVDP 171 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCS-EEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEECC
T ss_pred CCCEEEEeCCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEECC
Confidence 478999999999999999988875 9999999999999887766433 3 5799999999885 32 346899999753
No 289
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.28 E-value=1.5e-05 Score=89.69 Aligned_cols=181 Identities=11% Similarity=-0.005 Sum_probs=114.5
Q ss_pred cccccchhHHHHHHHHhhCCC-CCCCCCeEEEECCCcchHHHHHHHc----CCCeEEEEcCCHHHHHHHHHHhhcCC---
Q 006149 44 FEWYAEWPQLRDPLISLIGAP-TSSPPPQILVPGCGNSRLSEHLYDA----GFHGITNVDFSKVVISDMLRRNVRDR--- 115 (659)
Q Consensus 44 fewy~~~~~l~~~l~~~l~~~-~~~~~~~ILDiGCG~G~~s~~La~~----g~~~VtgvD~S~~~i~~~~~~~~~~~--- 115 (659)
..-|.....+...+.+++... .+.++.+|||++||+|.+...+++. +..+++|+|+++.++..++....-.+
T Consensus 196 ~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~ 275 (542)
T 3lkd_A 196 AGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPI 275 (542)
T ss_dssp CSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCG
T ss_pred CCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCc
Confidence 333445567777788877631 1246789999999999998877765 24589999999999987765443333
Q ss_pred CCcEEEEeecCCC--C-CCCCcccEEEecccccccCCccc-----------c---h--HHHHHHHHHHHhccc-cCeEEE
Q 006149 116 SDMRWRVMDMTSM--Q-FMDETFDVILDKGGLDALMEPEL-----------G---H--KLGNQYLSEVKRLLK-SGGKFV 175 (659)
Q Consensus 116 ~~i~~~~~D~~~l--~-~~~~sFDvVi~~g~l~~l~~~~~-----------~---~--~~~~~~l~ei~rvLk-pGG~lv 175 (659)
.++.+.++|.... | .....||+|+++..+..-..... + + ..--.++..+.+.|+ +||++.
T Consensus 276 ~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a 355 (542)
T 3lkd_A 276 ENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMA 355 (542)
T ss_dssp GGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEE
T ss_pred CccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEE
Confidence 3578999998876 3 34678999998865532110000 0 0 001258999999999 999998
Q ss_pred EEEcCCchhh----cchhhhh-ccCceEEEeeeCCCCCCCCCCccEEEEEEecC
Q 006149 176 CLTLAESHVL----GLLFPKF-RFGWKMSVHAIPQKSSSEPSLQTFMVVADKEN 224 (659)
Q Consensus 176 i~~~~~~~~~----~~l~~~~-~~~w~~~~~~i~~~~~~~~~l~~f~~v~~k~~ 224 (659)
++....--+. ..+-..+ ..++...+..++..-=.....+..+++.+|.+
T Consensus 356 ~VlP~g~Lf~~~~~~~iRk~Lle~~~l~~II~LP~~lF~~t~i~t~Ilvl~K~k 409 (542)
T 3lkd_A 356 IVLPHGVLFRGNAEGTIRKALLEEGAIDTVIGLPANIFFNTSIPTTVIILKKNR 409 (542)
T ss_dssp EEEETHHHHCCTHHHHHHHHHHHTTCEEEEEECCSSCSSSCCCCEEEEEECSSC
T ss_pred EEecchHhhCCchhHHHHHHHHhCCceeEEEEccccccCCCCCcEEEEEEecCC
Confidence 8876421111 1122222 23555556666542212345666888887754
No 290
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.26 E-value=3.5e-07 Score=93.41 Aligned_cols=79 Identities=13% Similarity=0.089 Sum_probs=61.1
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCH-------HHHHHHHHHhhcCC--CCcEEEEeecCCC-C-CCC--C
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSK-------VVISDMLRRNVRDR--SDMRWRVMDMTSM-Q-FMD--E 133 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~-------~~i~~~~~~~~~~~--~~i~~~~~D~~~l-~-~~~--~ 133 (659)
.++.+|||+|||+|.++..++..+. +|+++|+++ .+++.+++.....+ .+++++++|+.++ + +++ +
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~ 160 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQG 160 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHC
T ss_pred CCcCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCC
Confidence 3568999999999999999999875 899999999 88887754332222 3599999999875 3 444 7
Q ss_pred cccEEEecccccc
Q 006149 134 TFDVILDKGGLDA 146 (659)
Q Consensus 134 sFDvVi~~g~l~~ 146 (659)
+||+|++...+.+
T Consensus 161 ~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 161 KPDIVYLDPMYPE 173 (258)
T ss_dssp CCSEEEECCCC--
T ss_pred CccEEEECCCCCC
Confidence 8999998766654
No 291
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.24 E-value=9.5e-07 Score=89.88 Aligned_cols=86 Identities=12% Similarity=0.113 Sum_probs=63.4
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCe--EEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCC
Q 006149 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHG--ITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ 129 (659)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~--VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~ 129 (659)
.+...+.+.+.. .++.+|||||||+|.++. +.. + .+ |+++|+++.+++.++++... .++++++++|+.+++
T Consensus 8 ~i~~~iv~~~~~---~~~~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~~~~~~a~~~~~~-~~~v~~i~~D~~~~~ 80 (252)
T 1qyr_A 8 FVIDSIVSAINP---QKGQAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDRDLAARLQTHPFL-GPKLTIYQQDAMTFN 80 (252)
T ss_dssp HHHHHHHHHHCC---CTTCCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCHHHHHHHHTCTTT-GGGEEEECSCGGGCC
T ss_pred HHHHHHHHhcCC---CCcCEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCHHHHHHHHHHhcc-CCceEEEECchhhCC
Confidence 445556666654 567899999999999999 754 4 36 99999999999987655432 357999999999987
Q ss_pred CCCC-----cccEEEecccc
Q 006149 130 FMDE-----TFDVILDKGGL 144 (659)
Q Consensus 130 ~~~~-----sFDvVi~~g~l 144 (659)
+++. ..|.|+++-..
T Consensus 81 ~~~~~~~~~~~~~vvsNlPY 100 (252)
T 1qyr_A 81 FGELAEKMGQPLRVFGNLPY 100 (252)
T ss_dssp HHHHHHHHTSCEEEEEECCT
T ss_pred HHHhhcccCCceEEEECCCC
Confidence 6432 24567766443
No 292
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.22 E-value=1.4e-05 Score=82.75 Aligned_cols=109 Identities=22% Similarity=0.296 Sum_probs=82.3
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhc------CCCCcEEEEeecCCC-CCCCCcccEEE
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR------DRSDMRWRVMDMTSM-QFMDETFDVIL 139 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~------~~~~i~~~~~D~~~l-~~~~~sFDvVi 139 (659)
.+.+||.||-|.|..+..+++. +..+|+.||+++.+++.+++.... ..++++++.+|.... .-..++||+|+
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi 162 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEE
Confidence 5679999999999999999987 457999999999999988765421 347899999999886 34567899999
Q ss_pred ecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 140 DKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 140 ~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
.-.+ +...... .---..+++.+++.|+|||++++..-
T Consensus 163 ~D~~-dp~~~~~--~L~t~eFy~~~~~~L~p~Gv~v~q~~ 199 (294)
T 3o4f_A 163 SDCT-DPIGPGE--SLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp ESCC-CCCCTTC--CSSCCHHHHHHHHTEEEEEEEEEEEE
T ss_pred EeCC-CcCCCch--hhcCHHHHHHHHHHhCCCCEEEEecC
Confidence 6432 1111100 00023789999999999999998653
No 293
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.22 E-value=2.6e-06 Score=96.88 Aligned_cols=100 Identities=16% Similarity=0.102 Sum_probs=72.5
Q ss_pred CCeEEEECCCcchHHHHHHH---cCCC--eEEEEcCCHHHHHHHHHHhhcC--CCCcEEEEeecCCCCCCCCcccEEEec
Q 006149 69 PPQILVPGCGNSRLSEHLYD---AGFH--GITNVDFSKVVISDMLRRNVRD--RSDMRWRVMDMTSMQFMDETFDVILDK 141 (659)
Q Consensus 69 ~~~ILDiGCG~G~~s~~La~---~g~~--~VtgvD~S~~~i~~~~~~~~~~--~~~i~~~~~D~~~l~~~~~sFDvVi~~ 141 (659)
...|||+|||+|-++...++ .+.. +|++|+-|+.+.. +++....+ ...|+++.+|+++...| +++|+|++.
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~-a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVSE 435 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVV-TLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVSE 435 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHH-HHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEECC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHH-HHHHHHhccCCCeEEEEeCcceeccCC-cccCEEEEE
Confidence 45799999999999544433 3332 6899999986664 44433333 36799999999998776 789999987
Q ss_pred ccccccCCcccchHHHHHHHHHHHhccccCeEEE
Q 006149 142 GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFV 175 (659)
Q Consensus 142 g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lv 175 (659)
..-+.+.... +...+....|+|||||+++
T Consensus 436 wMG~fLl~E~-----mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 436 LLGSFADNEL-----SPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCBTTBGGGC-----HHHHHHHHGGGEEEEEEEE
T ss_pred cCcccccccC-----CHHHHHHHHHhcCCCcEEc
Confidence 6544433221 3467888899999999875
No 294
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.20 E-value=1.6e-06 Score=98.69 Aligned_cols=102 Identities=20% Similarity=0.148 Sum_probs=74.7
Q ss_pred CCeEEEECCCcchHHHHHHHc----C----------CCeEEEEcCCHHHHHHHHHHhhcC-CCCcEEEEeecCCCCCC--
Q 006149 69 PPQILVPGCGNSRLSEHLYDA----G----------FHGITNVDFSKVVISDMLRRNVRD-RSDMRWRVMDMTSMQFM-- 131 (659)
Q Consensus 69 ~~~ILDiGCG~G~~s~~La~~----g----------~~~VtgvD~S~~~i~~~~~~~~~~-~~~i~~~~~D~~~l~~~-- 131 (659)
...|||+|||+|-++...+.. + ..+|++||.++.++..++.+.... ...|+++.+|+++...+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 458999999999997432221 2 238999999998776555554322 36799999999998764
Q ss_pred ---CCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEE
Q 006149 132 ---DETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFV 175 (659)
Q Consensus 132 ---~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lv 175 (659)
.++.|+|++...-+.. +.+ ....+|..+.++|||||+++
T Consensus 490 ~~~~ekVDIIVSElmGsfl-~nE----L~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 490 DRGFEQPDIIVSELLGSFG-DNE----LSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HTTCCCCSEEEECCCBTTB-GGG----SHHHHHHTTGGGSCTTCEEE
T ss_pred cCCCCcccEEEEecccccc-chh----ccHHHHHHHHHhCCCCcEEE
Confidence 5899999997664432 222 14578888899999999876
No 295
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.14 E-value=2.1e-05 Score=77.07 Aligned_cols=115 Identities=12% Similarity=-0.023 Sum_probs=80.7
Q ss_pred ccccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCC----CCcEE
Q 006149 45 EWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR----SDMRW 120 (659)
Q Consensus 45 ewy~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~----~~i~~ 120 (659)
-|..-.+.....|...+. +..+|||+||| ..+..++....++|+.||.++...+.+++.....+ .++++
T Consensus 12 P~~~v~~~~~~~L~~~l~-----~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~ 84 (202)
T 3cvo_A 12 PELTMPPAEAEALRMAYE-----EAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNI 84 (202)
T ss_dssp CCCCSCHHHHHHHHHHHH-----HCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEE
T ss_pred CCccCCHHHHHHHHHHhh-----CCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEE
Confidence 354444444445555443 46799999996 56777776523699999999999999887766544 47999
Q ss_pred EEeecCCC---------------C--------C-CCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEE
Q 006149 121 RVMDMTSM---------------Q--------F-MDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVC 176 (659)
Q Consensus 121 ~~~D~~~l---------------~--------~-~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi 176 (659)
+.+|+... + . ..++||+|+.-+-. ...++..+.+.|+|||++++
T Consensus 85 ~~gda~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k------------~~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 85 VWTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRF------------RVGCALATAFSITRPVTLLF 152 (202)
T ss_dssp EECCCSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSS------------HHHHHHHHHHHCSSCEEEEE
T ss_pred EEeCchhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCC------------chhHHHHHHHhcCCCeEEEE
Confidence 99997542 1 1 23789999965521 23667778899999999976
Q ss_pred EE
Q 006149 177 LT 178 (659)
Q Consensus 177 ~~ 178 (659)
-.
T Consensus 153 DN 154 (202)
T 3cvo_A 153 DD 154 (202)
T ss_dssp TT
T ss_pred eC
Confidence 55
No 296
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.12 E-value=1.7e-05 Score=84.92 Aligned_cols=114 Identities=15% Similarity=0.071 Sum_probs=78.2
Q ss_pred CCeEEEECCCcchHHHHHHHc----------------CCCeEEEEcCCHHHHHHHHHHhhcCC-------------CCcE
Q 006149 69 PPQILVPGCGNSRLSEHLYDA----------------GFHGITNVDFSKVVISDMLRRNVRDR-------------SDMR 119 (659)
Q Consensus 69 ~~~ILDiGCG~G~~s~~La~~----------------g~~~VtgvD~S~~~i~~~~~~~~~~~-------------~~i~ 119 (659)
..+|+|+|||+|..+..+... ..-+|..-|..........+...... .+-.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 579999999999999877321 12367788877655544433332210 1123
Q ss_pred EEEeecCC---CCCCCCcccEEEecccccccCCcccch-------------------------------HHHHHHHHHHH
Q 006149 120 WRVMDMTS---MQFMDETFDVILDKGGLDALMEPELGH-------------------------------KLGNQYLSEVK 165 (659)
Q Consensus 120 ~~~~D~~~---l~~~~~sFDvVi~~g~l~~l~~~~~~~-------------------------------~~~~~~l~ei~ 165 (659)
|..+.... -.||+++||+|++..+|||+....... ..+..+|+..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444443 358899999999999999987443211 13667899999
Q ss_pred hccccCeEEEEEEcCCc
Q 006149 166 RLLKSGGKFVCLTLAES 182 (659)
Q Consensus 166 rvLkpGG~lvi~~~~~~ 182 (659)
+.|+|||++++...+..
T Consensus 213 ~eL~pGG~mvl~~~gr~ 229 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGRT 229 (374)
T ss_dssp HHEEEEEEEEEEEEECC
T ss_pred HHhCCCCEEEEEEecCC
Confidence 99999999999998754
No 297
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.06 E-value=2.5e-05 Score=83.89 Aligned_cols=114 Identities=14% Similarity=0.026 Sum_probs=80.3
Q ss_pred CCeEEEECCCcchHHHHHHHc------------------CCCeEEEEcCC-----------HHHHHHHHHHhhcCCCCcE
Q 006149 69 PPQILVPGCGNSRLSEHLYDA------------------GFHGITNVDFS-----------KVVISDMLRRNVRDRSDMR 119 (659)
Q Consensus 69 ~~~ILDiGCG~G~~s~~La~~------------------g~~~VtgvD~S-----------~~~i~~~~~~~~~~~~~i~ 119 (659)
..+|+|+||++|..|..+... ..-+|+..|.. +.+.+.+.+.. ....+..
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~-g~~~~~~ 131 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKEN-GRKIGSC 131 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHT-CCCTTSE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhc-cCCCCce
Confidence 579999999999999877653 11357788877 54444332221 1123457
Q ss_pred EEEeecCCC---CCCCCcccEEEecccccccCCcccch--------------------------------HHHHHHHHHH
Q 006149 120 WRVMDMTSM---QFMDETFDVILDKGGLDALMEPELGH--------------------------------KLGNQYLSEV 164 (659)
Q Consensus 120 ~~~~D~~~l---~~~~~sFDvVi~~g~l~~l~~~~~~~--------------------------------~~~~~~l~ei 164 (659)
|+.+....+ .|++++||+|+++.+|||+....... ..+..+|+..
T Consensus 132 f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 132 LIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 777766654 68899999999999999987543220 1133448888
Q ss_pred HhccccCeEEEEEEcCCch
Q 006149 165 KRLLKSGGKFVCLTLAESH 183 (659)
Q Consensus 165 ~rvLkpGG~lvi~~~~~~~ 183 (659)
.+.|+|||++++..++...
T Consensus 212 a~eL~pGG~mvl~~~gr~~ 230 (384)
T 2efj_A 212 SEELISRGRMLLTFICKED 230 (384)
T ss_dssp HHHEEEEEEEEEEEECCCT
T ss_pred HHHhccCCeEEEEEecCCC
Confidence 9999999999999988654
No 298
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.04 E-value=3.5e-06 Score=85.94 Aligned_cols=104 Identities=11% Similarity=0.050 Sum_probs=67.6
Q ss_pred HHHhhCCCCCCCC--CeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHh---h----cCC---CCcEEEEee
Q 006149 57 LISLIGAPTSSPP--PQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRN---V----RDR---SDMRWRVMD 124 (659)
Q Consensus 57 l~~~l~~~~~~~~--~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~---~----~~~---~~i~~~~~D 124 (659)
+.+.+.. .++ .+|||+|||+|..+..++..|. +|+++|+++.+.+.+++.. . ..+ .+++++++|
T Consensus 78 l~~al~l---~~g~~~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D 153 (258)
T 2oyr_A 78 VAKAVGI---KGDYLPDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHAS 153 (258)
T ss_dssp HHHHTTC---BTTBCCCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESC
T ss_pred HHHHhcc---cCCCCCEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECC
Confidence 4455543 345 8999999999999999999876 7999999997644332221 1 111 468999999
Q ss_pred cCCC-CCCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCe
Q 006149 125 MTSM-QFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGG 172 (659)
Q Consensus 125 ~~~l-~~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG 172 (659)
+.++ +...++||+|+....+..- . . ..++++..++|++.+
T Consensus 154 ~~~~L~~~~~~fDvV~lDP~y~~~-~-~------saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 154 SLTALTDITPRPQVVYLDPMFPHK-Q-K------SALVKKEMRVFQSLV 194 (258)
T ss_dssp HHHHSTTCSSCCSEEEECCCCCCC-C-C-----------HHHHHHHHHS
T ss_pred HHHHHHhCcccCCEEEEcCCCCCc-c-c------chHHHHHHHHHHHhh
Confidence 8874 3222479999987766542 1 1 134555556665543
No 299
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.98 E-value=8.4e-06 Score=83.64 Aligned_cols=147 Identities=12% Similarity=0.114 Sum_probs=86.9
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEeccccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLD 145 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~ 145 (659)
.++.+|||+||++|.++..+++. +...|+|+|+...+..... .......++.....++.-..+..+.+|+|++..+-+
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~-~~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~APn 158 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPI-HMQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIGES 158 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCC-CCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCC
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccc-cccccCCceEEeecCceeeecCCCCcCEEeecCcCC
Confidence 47889999999999999999975 6668999999753210000 000011234444433333345568999999977666
Q ss_pred ccCCcccchHHHHHHHHHHHhccccC-eEEEEEEcC--CchhhcchhhhhccCceEEEeeeCCCCCCCCCCccEEE
Q 006149 146 ALMEPELGHKLGNQYLSEVKRLLKSG-GKFVCLTLA--ESHVLGLLFPKFRFGWKMSVHAIPQKSSSEPSLQTFMV 218 (659)
Q Consensus 146 ~l~~~~~~~~~~~~~l~ei~rvLkpG-G~lvi~~~~--~~~~~~~l~~~~~~~w~~~~~~i~~~~~~~~~l~~f~~ 218 (659)
......+......+|.-+.++|+|| |.|++-.+. .+... .++..+...|..-...-| ++.....+.|++
T Consensus 159 -sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~~-~ll~~lk~~F~~V~~~KP--aSR~~S~E~Y~V 230 (300)
T 3eld_A 159 -SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVI-EKLERLQLRFGGGIVRVP--FSRNSTHEMYYI 230 (300)
T ss_dssp -CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHHH-HHHHHHHHHHCCEEECCT--TSCTTCCCEEEE
T ss_pred -CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccHH-HHHHHHHHhCCcEEEEeC--CCCCCChHHeee
Confidence 3332212122234588889999999 999998876 44432 334444443333332333 333444555554
No 300
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.98 E-value=5.5e-06 Score=76.39 Aligned_cols=89 Identities=16% Similarity=0.137 Sum_probs=62.0
Q ss_pred CCCeEEEECCCcc-hHHHHHHH-cCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCC-CcccEEEecccc
Q 006149 68 PPPQILVPGCGNS-RLSEHLYD-AGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMD-ETFDVILDKGGL 144 (659)
Q Consensus 68 ~~~~ILDiGCG~G-~~s~~La~-~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~-~sFDvVi~~g~l 144 (659)
++.+|||+|||+| ..+..|++ .|+ +|+++|+++.+++ +++.|+++..... +.||+|.+..
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av~--------------~v~dDiF~P~~~~Y~~~DLIYsir-- 97 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHGG--------------IVRDDITSPRMEIYRGAALIYSIR-- 97 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSSTT--------------EECCCSSSCCHHHHTTEEEEEEES--
T ss_pred CCCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCccccc--------------eEEccCCCCcccccCCcCEEEEcC--
Confidence 4579999999999 69999997 787 9999999995543 8999999854321 4799997532
Q ss_pred cccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCch
Q 006149 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (659)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~ 183 (659)
+.++ +...+-++.+. -|.-+++..++.+.
T Consensus 98 ---PP~E-----l~~~i~~lA~~--v~adliI~pL~~E~ 126 (153)
T 2k4m_A 98 ---PPAE-----IHSSLMRVADA--VGARLIIKPLTGED 126 (153)
T ss_dssp ---CCTT-----THHHHHHHHHH--HTCEEEEECBTTBC
T ss_pred ---CCHH-----HHHHHHHHHHH--cCCCEEEEcCCCCc
Confidence 2222 22333333332 36678888776544
No 301
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.87 E-value=9.3e-05 Score=85.51 Aligned_cols=135 Identities=13% Similarity=0.031 Sum_probs=88.1
Q ss_pred ccccchhHHHHHHHHh----hCCCCCCCCCeEEEECCCcchHHHHHHHcC----CCeEEEEcCCHHHHHHHHHHh--hc-
Q 006149 45 EWYAEWPQLRDPLISL----IGAPTSSPPPQILVPGCGNSRLSEHLYDAG----FHGITNVDFSKVVISDMLRRN--VR- 113 (659)
Q Consensus 45 ewy~~~~~l~~~l~~~----l~~~~~~~~~~ILDiGCG~G~~s~~La~~g----~~~VtgvD~S~~~i~~~~~~~--~~- 113 (659)
.-|.....+...+..+ +.. ...++.+|||+|||+|.+...++... ..+++|+|+++.+++.++.+. ..
T Consensus 295 GqFYTP~eLA~lMVeLA~ill~~-~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN 373 (878)
T 3s1s_A 295 GVVPTDIELGKVLSIISQHILGR-PLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFP 373 (878)
T ss_dssp BSSSCCHHHHHHHHHHHHHHHCS-CCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTST
T ss_pred ceEcCCHHHHHHHHHHHhhhccc-cCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHh
Confidence 3344456777766666 321 12357899999999999999988762 247999999999988763222 11
Q ss_pred ---CC-CCcEEEEeecCCC-CCCCCcccEEEecccccccCCcccc----------------------hHHHHHHHHHHHh
Q 006149 114 ---DR-SDMRWRVMDMTSM-QFMDETFDVILDKGGLDALMEPELG----------------------HKLGNQYLSEVKR 166 (659)
Q Consensus 114 ---~~-~~i~~~~~D~~~l-~~~~~sFDvVi~~g~l~~l~~~~~~----------------------~~~~~~~l~ei~r 166 (659)
.+ ....+...|+... +...+.||+|+++..+......... ......++..+.+
T Consensus 374 ~LlhGi~~~~I~~dD~L~~~~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~ 453 (878)
T 3s1s_A 374 QLVSSNNAPTITGEDVCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTE 453 (878)
T ss_dssp TTCBTTBCCEEECCCGGGCCGGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHH
T ss_pred hhhcCCCcceEEecchhcccccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHH
Confidence 11 2235556666653 2345789999998776321111100 0124457889999
Q ss_pred ccccCeEEEEEEcC
Q 006149 167 LLKSGGKFVCLTLA 180 (659)
Q Consensus 167 vLkpGG~lvi~~~~ 180 (659)
.|++||+++++...
T Consensus 454 lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 454 LVQDGTVISAIMPK 467 (878)
T ss_dssp HSCTTCEEEEEEET
T ss_pred hcCCCcEEEEEECh
Confidence 99999999998865
No 302
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.78 E-value=3.8e-05 Score=81.97 Aligned_cols=111 Identities=15% Similarity=0.161 Sum_probs=79.0
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhc---------CCCCcEEEEeecCCCC----CCCCc
Q 006149 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR---------DRSDMRWRVMDMTSMQ----FMDET 134 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~---------~~~~i~~~~~D~~~l~----~~~~s 134 (659)
++.+||-||.|.|..+.++.+.+..+|+.||+++.+++.+++.... ..++++++.+|....- -..++
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~ 284 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 284 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCc
Confidence 4579999999999999999988667999999999999988765422 1146889999987641 13468
Q ss_pred ccEEEecccccccC-Cccc-chHH-HHHHHHHHHhccccCeEEEEEE
Q 006149 135 FDVILDKGGLDALM-EPEL-GHKL-GNQYLSEVKRLLKSGGKFVCLT 178 (659)
Q Consensus 135 FDvVi~~g~l~~l~-~~~~-~~~~-~~~~l~ei~rvLkpGG~lvi~~ 178 (659)
||+|+.-.+-.... ++.. .... -+.+++.+++.|+|||+++.-.
T Consensus 285 yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 285 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred eeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 99999643211111 1110 0111 4678899999999999998754
No 303
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.77 E-value=4.2e-05 Score=81.47 Aligned_cols=116 Identities=16% Similarity=0.104 Sum_probs=83.6
Q ss_pred CCCeEEEECCCcchHHHHHHHc------------C-----CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCC-
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA------------G-----FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS- 127 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~------------g-----~~~VtgvD~S~~~i~~~~~~~~~~~--~~i~~~~~D~~~- 127 (659)
...+|+|+||++|..|..+... + .-+|+..|........+.+...... .+..|+.+....
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3468999999999888765443 1 1368899988877766654432200 134666665555
Q ss_pred --CCCCCCcccEEEecccccccCCcccc--------------------------hHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 128 --MQFMDETFDVILDKGGLDALMEPELG--------------------------HKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 128 --l~~~~~sFDvVi~~g~l~~l~~~~~~--------------------------~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
-.|+++++|+|++..+|||+...... ...+..+|+...+.|+|||++++..+
T Consensus 131 y~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp SSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred hhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 46899999999999999998753311 12367779999999999999999998
Q ss_pred CCch
Q 006149 180 AESH 183 (659)
Q Consensus 180 ~~~~ 183 (659)
+...
T Consensus 211 gr~~ 214 (359)
T 1m6e_X 211 GRRS 214 (359)
T ss_dssp ECSS
T ss_pred cCCC
Confidence 7544
No 304
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.74 E-value=6.7e-05 Score=80.00 Aligned_cols=114 Identities=19% Similarity=0.173 Sum_probs=83.0
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCC-CeEEEEcCCHHHHHHHHHHhhcC-------CCCcEEEEeecCCCC-CCCCcccE
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRD-------RSDMRWRVMDMTSMQ-FMDETFDV 137 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g~-~~VtgvD~S~~~i~~~~~~~~~~-------~~~i~~~~~D~~~l~-~~~~sFDv 137 (659)
.++.+|||++||.|.=|..|+..+. +.|+++|+++.-+..+.+..... ..++.+.+.|...++ ...+.||.
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~ 226 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDR 226 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEE
T ss_pred CCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCCE
Confidence 6889999999999999999988753 57999999999888776655332 246888889988763 44678999
Q ss_pred EEe----cccccccC--Cccc----ch-------HHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 138 ILD----KGGLDALM--EPEL----GH-------KLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 138 Vi~----~g~l~~l~--~~~~----~~-------~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
|+. .|.-..+. +++. .. ..-.++|....++|||||+++-+|.+
T Consensus 227 VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCS 286 (359)
T 4fzv_A 227 VLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCS 286 (359)
T ss_dssp EEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred EEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCC
Confidence 994 33200111 1110 00 11467899999999999999999876
No 305
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.70 E-value=0.00028 Score=69.84 Aligned_cols=132 Identities=14% Similarity=0.101 Sum_probs=84.0
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhc--CCCCcEEEEe-ecCCCCCCCCcccEEEecc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR--DRSDMRWRVM-DMTSMQFMDETFDVILDKG 142 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~--~~~~i~~~~~-D~~~l~~~~~sFDvVi~~g 142 (659)
.++.+|||+||++|.++...+.. |...|+|+|+-..--+. -+... ..+.++|.++ |+..++ ..++|+|+|--
T Consensus 77 ~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~--P~~~~s~gwn~v~fk~gvDv~~~~--~~~~DtllcDI 152 (267)
T 3p8z_A 77 IPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEE--PVPMSTYGWNIVKLMSGKDVFYLP--PEKCDTLLCDI 152 (267)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCC--CCCCCCTTTTSEEEECSCCGGGCC--CCCCSEEEECC
T ss_pred CCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccC--cchhhhcCcCceEEEeccceeecC--CccccEEEEec
Confidence 57889999999999999977766 66789999987621110 00000 1256899998 987765 36799999753
Q ss_pred cccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcCCch--hhcchhhhhccCceEEEeeeCC
Q 006149 143 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH--VLGLLFPKFRFGWKMSVHAIPQ 205 (659)
Q Consensus 143 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~--~~~~l~~~~~~~w~~~~~~i~~ 205 (659)
.= .-.++..+...--++|+-+.++|++ |-|+|-.+...+ +. +.++.++..|.-.....+.
T Consensus 153 ge-Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~p~v~-e~l~~lq~~fgg~lVR~P~ 214 (267)
T 3p8z_A 153 GE-SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYMPTVI-EHLERLQRKHGGMLVRNPL 214 (267)
T ss_dssp CC-CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCSHHHH-HHHHHHHHHHCCEEECCTT
T ss_pred CC-CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCChhHH-HHHHHHHHHhCCEeEeCCC
Confidence 33 2233222222233488888999998 888887777555 33 3344444444444444443
No 306
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.64 E-value=0.00019 Score=73.38 Aligned_cols=134 Identities=13% Similarity=0.111 Sum_probs=83.3
Q ss_pred CCCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEe-ecCCCCCCCCcccEEEecc
Q 006149 66 SSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVM-DMTSMQFMDETFDVILDKG 142 (659)
Q Consensus 66 ~~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~-~~i~~~~~-D~~~l~~~~~sFDvVi~~g 142 (659)
..++.+|||+||++|.++...+.. |...|+|+|+-..--+.= .....-+ ..+.+... |+..++. ..+|+|+|--
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P-~~~~ql~w~lV~~~~~~Dv~~l~~--~~~D~ivcDi 168 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEP-QLVQSYGWNIVTMKSGVDVFYRPS--ECCDTLLCDI 168 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCC-CCCCBTTGGGEEEECSCCTTSSCC--CCCSEEEECC
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCc-chhhhcCCcceEEEeccCHhhCCC--CCCCEEEEEC
Confidence 357889999999999999977766 667899999876311000 0000001 23777776 8877753 6699999754
Q ss_pred cccccCCcccchHHHHHHHHHHHhccccC-eEEEEEEcCC--chhhcchhhhhccCceEEEeeeC
Q 006149 143 GLDALMEPELGHKLGNQYLSEVKRLLKSG-GKFVCLTLAE--SHVLGLLFPKFRFGWKMSVHAIP 204 (659)
Q Consensus 143 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpG-G~lvi~~~~~--~~~~~~l~~~~~~~w~~~~~~i~ 204 (659)
. ..-+.+..+...--++|+-+.++|++| |-|+|-.+.. +.+. +.++.++..|.-.....+
T Consensus 169 g-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~~~v~-e~l~~lq~~fgg~lvr~P 231 (321)
T 3lkz_A 169 G-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYMPKVI-EKMELLQRRYGGGLVRNP 231 (321)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTSHHHH-HHHHHHHHHHCCEEECCT
T ss_pred c-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCChHHH-HHHHHHHHHhCCEeEeCC
Confidence 4 444443322222334788888999999 8999877775 3333 233444444443444433
No 307
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.64 E-value=0.00015 Score=77.05 Aligned_cols=99 Identities=10% Similarity=-0.021 Sum_probs=71.3
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEEEecccccc
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvVi~~g~l~~ 146 (659)
.++.++||+||++|.+|..|++.|. .|++||+.+ |.... ...++++++++|+.....+.+.||+|+|-.+.+.
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~-----l~~~l-~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~~p 282 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGP-----MAQSL-MDTGQVTWLREDGFKFRPTRSNISWMVCDMVEKP 282 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSC-----CCHHH-HTTTCEEEECSCTTTCCCCSSCEEEEEECCSSCH
T ss_pred CCCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhh-----cChhh-ccCCCeEEEeCccccccCCCCCcCEEEEcCCCCh
Confidence 4789999999999999999999986 999999876 22222 2357899999999998777789999998554332
Q ss_pred cCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 147 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 147 l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
. .....+..|...+..++.++.+.+.
T Consensus 283 ----~----~~~~l~~~wl~~~~~~~aI~~lKL~ 308 (375)
T 4auk_A 283 ----A----KVAALMAQWLVNGWCRETIFNLKLP 308 (375)
T ss_dssp ----H----HHHHHHHHHHHTTSCSEEEEEEECC
T ss_pred ----H----HhHHHHHHHHhccccceEEEEEEec
Confidence 1 2334455555555555665555553
No 308
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.62 E-value=3.3e-05 Score=78.67 Aligned_cols=104 Identities=15% Similarity=0.182 Sum_probs=66.8
Q ss_pred CCCeEEEECCCcchHHHHHHHc-------CC------CeEEEEcCCH---HHHHHH-----------HHHhhc-------
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA-------GF------HGITNVDFSK---VVISDM-----------LRRNVR------- 113 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~-------g~------~~VtgvD~S~---~~i~~~-----------~~~~~~------- 113 (659)
+..+|||+|||+|..+..+++. +. .+++++|..+ ..+.++ .+....
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 5679999999999988776542 21 3799999776 444432 222111
Q ss_pred --------CCCCcEEEEeecCC-CCC-CC---CcccEEEecccccccCCcccchHH-HHHHHHHHHhccccCeEEEE
Q 006149 114 --------DRSDMRWRVMDMTS-MQF-MD---ETFDVILDKGGLDALMEPELGHKL-GNQYLSEVKRLLKSGGKFVC 176 (659)
Q Consensus 114 --------~~~~i~~~~~D~~~-l~~-~~---~sFDvVi~~g~l~~l~~~~~~~~~-~~~~l~ei~rvLkpGG~lvi 176 (659)
...+++++.+|+.+ ++. ++ ..||+|+.-+.--. ..++ . -..+|+.+.++|+|||+++.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~-~~p~----lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPA-KNPD----MWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTT-TCGG----GCCHHHHHHHHHHEEEEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcc-cChh----hcCHHHHHHHHHHcCCCcEEEE
Confidence 11357788999877 332 22 27999996431111 0111 0 24799999999999999884
No 309
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.62 E-value=0.00014 Score=74.54 Aligned_cols=84 Identities=13% Similarity=0.144 Sum_probs=66.0
Q ss_pred hhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCC
Q 006149 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ 129 (659)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~ 129 (659)
.+.+...+.+.+.. .++..+||.+||.|..+..+++.+ +.|+|+|.++.+++.+++ ... ++++++++|+.+++
T Consensus 7 ~pVLl~e~le~L~~---~~gg~~VD~T~G~GGHS~~il~~~-g~VigiD~Dp~Ai~~A~~-L~~--~rv~lv~~~f~~l~ 79 (285)
T 1wg8_A 7 VPVLYQEALDLLAV---RPGGVYVDATLGGAGHARGILERG-GRVIGLDQDPEAVARAKG-LHL--PGLTVVQGNFRHLK 79 (285)
T ss_dssp CCTTHHHHHHHHTC---CTTCEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHH-TCC--TTEEEEESCGGGHH
T ss_pred hhHHHHHHHHhhCC---CCCCEEEEeCCCCcHHHHHHHHCC-CEEEEEeCCHHHHHHHHh-hcc--CCEEEEECCcchHH
Confidence 34555666677764 578899999999999999999984 499999999999998876 533 68999999998873
Q ss_pred -----CCCCcccEEEe
Q 006149 130 -----FMDETFDVILD 140 (659)
Q Consensus 130 -----~~~~sFDvVi~ 140 (659)
...++||.|+.
T Consensus 80 ~~L~~~g~~~vDgIL~ 95 (285)
T 1wg8_A 80 RHLAALGVERVDGILA 95 (285)
T ss_dssp HHHHHTTCSCEEEEEE
T ss_pred HHHHHcCCCCcCEEEe
Confidence 12256888774
No 310
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.58 E-value=7.7e-05 Score=74.60 Aligned_cols=80 Identities=11% Similarity=0.081 Sum_probs=60.8
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCCC------------------CCCeeEE--e---
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ------------------DKSLKVF--N--- 597 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~~------------------d~rl~vf--~--- 597 (659)
...|||-||.|.|.++.++.++.|. ++++||++|.|++.|++++.-.. +...|+. +
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~ 138 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred CCCeEEEECCCccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeee
Confidence 4579999999999999999998876 89999999999999999873221 1112221 1
Q ss_pred ------cc-cchhHHHHHHHhhccCCCCcEEEec
Q 006149 598 ------HL-FCLQLEEDVNLVLFGLSSESCIKDN 624 (659)
Q Consensus 598 ------~l-~~~~f~~~~~~~Lf~~~~~g~~~~n 624 (659)
|+ ....+++.+.++| +|+|++..-
T Consensus 139 ~~~~~~~~~~~~~~~~e~~rvL---kPGG~l~f~ 169 (236)
T 3orh_A 139 LSEETWHTHQFNFIKNHAFRLL---KPGGVLTYC 169 (236)
T ss_dssp CBGGGTTTHHHHHHHHTHHHHE---EEEEEEEEC
T ss_pred cccchhhhcchhhhhhhhhhee---CCCCEEEEE
Confidence 11 1346778899999 999999763
No 311
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.55 E-value=0.00017 Score=72.43 Aligned_cols=109 Identities=16% Similarity=0.111 Sum_probs=66.5
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCc---EEEEe-ecCCCCCCCCcccEEEec
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDM---RWRVM-DMTSMQFMDETFDVILDK 141 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~~~i---~~~~~-D~~~l~~~~~sFDvVi~~ 141 (659)
+|+.+|||+||+.|.++...++. +...|.|.++.... . + .-.....+++ .+.++ |+.+++ ...+|+|+|-
T Consensus 72 kpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-~-~P~~~~~~Gv~~i~~~~G~Df~~~~--~~~~DvVLSD 146 (269)
T 2px2_A 72 QPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-E-EPMLMQSYGWNIVTMKSGVDVFYKP--SEISDTLLCD 146 (269)
T ss_dssp CCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-C-CCCCCCSTTGGGEEEECSCCGGGSC--CCCCSEEEEC
T ss_pred CCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-c-CCCcccCCCceEEEeeccCCccCCC--CCCCCEEEeC
Confidence 68999999999999999999886 22233444443210 0 0 0000000234 44446 998854 5689999986
Q ss_pred ccccccCCcccchHHHHHHHHHHHhccccCe-EEEEEEcCC
Q 006149 142 GGLDALMEPELGHKLGNQYLSEVKRLLKSGG-KFVCLTLAE 181 (659)
Q Consensus 142 g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG-~lvi~~~~~ 181 (659)
.+-. ......+......+|.-+.++|+||| -|++=.+..
T Consensus 147 MAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg 186 (269)
T 2px2_A 147 IGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCP 186 (269)
T ss_dssp CCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred CCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCC
Confidence 5443 22222111112227888889999999 999988763
No 312
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.46 E-value=0.00032 Score=72.19 Aligned_cols=104 Identities=12% Similarity=0.018 Sum_probs=74.8
Q ss_pred CCCeEEEECCCcchHHHHHHHc----C--CCeEEEEcCCHH--------------------------HHHHHHHHhhcCC
Q 006149 68 PPPQILVPGCGNSRLSEHLYDA----G--FHGITNVDFSKV--------------------------VISDMLRRNVRDR 115 (659)
Q Consensus 68 ~~~~ILDiGCG~G~~s~~La~~----g--~~~VtgvD~S~~--------------------------~i~~~~~~~~~~~ 115 (659)
.+..|||+||..|..+..++.. + .++|+++|..+. .++.+++.....+
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 4679999999999999887653 1 468999996421 2444545444332
Q ss_pred ---CCcEEEEeecCCC-C-CCCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 116 ---SDMRWRVMDMTSM-Q-FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 116 ---~~i~~~~~D~~~l-~-~~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
.+++++.+|+.+. + +++++||+|+.-+-.+ .....+|+.+.+.|+|||++++-++.
T Consensus 186 l~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y---------~~~~~~Le~~~p~L~pGGiIv~DD~~ 246 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY---------ESTWDTLTNLYPKVSVGGYVIVDDYM 246 (282)
T ss_dssp CCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSH---------HHHHHHHHHHGGGEEEEEEEEESSCT
T ss_pred CCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc---------ccHHHHHHHHHhhcCCCEEEEEcCCC
Confidence 6799999998763 2 4457899998544221 11457899999999999999998874
No 313
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.36 E-value=0.0043 Score=69.52 Aligned_cols=176 Identities=11% Similarity=0.108 Sum_probs=106.0
Q ss_pred ccchhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc----C----------CCeEEEEcCCHHHHHHHHHHhh
Q 006149 47 YAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA----G----------FHGITNVDFSKVVISDMLRRNV 112 (659)
Q Consensus 47 y~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~----g----------~~~VtgvD~S~~~i~~~~~~~~ 112 (659)
|.....+...+.+++.. .++.+|+|.+||+|.+....++. . ...++|+|+.+.+...++-...
T Consensus 199 fyTP~~Vv~lmv~l~~p---~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~ 275 (530)
T 3ufb_A 199 FYTPRPVVRFMVEVMDP---QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLL 275 (530)
T ss_dssp CCCCHHHHHHHHHHHCC---CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHH
T ss_pred ECCcHHHHHHHHHhhcc---CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHH
Confidence 44556788888888875 67789999999999998766542 1 1369999999988775543322
Q ss_pred cC-CCCcEEEEeecCCCCC----CCCcccEEEecccccccCCcc------c---chHHHHHHHHHHHhccc-------cC
Q 006149 113 RD-RSDMRWRVMDMTSMQF----MDETFDVILDKGGLDALMEPE------L---GHKLGNQYLSEVKRLLK-------SG 171 (659)
Q Consensus 113 ~~-~~~i~~~~~D~~~l~~----~~~sFDvVi~~g~l~~l~~~~------~---~~~~~~~~l~ei~rvLk-------pG 171 (659)
-+ .....+.++|....+. +...||+|+++..+..-.... . ....--.++..+.+.|| +|
T Consensus 276 lhg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~g 355 (530)
T 3ufb_A 276 LHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNG 355 (530)
T ss_dssp HHTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSC
T ss_pred hcCCccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCC
Confidence 22 2345667788766543 235799999987764211100 0 00012346677777776 79
Q ss_pred eEEEEEEcCC----chhhcchhhhh-ccCceEEEeeeCCCC-CCCCCCccEEEEEEecCC
Q 006149 172 GKFVCLTLAE----SHVLGLLFPKF-RFGWKMSVHAIPQKS-SSEPSLQTFMVVADKENS 225 (659)
Q Consensus 172 G~lvi~~~~~----~~~~~~l~~~~-~~~w~~~~~~i~~~~-~~~~~l~~f~~v~~k~~~ 225 (659)
|++.++.... ......+-+.+ ..++...+-.++..- .+....+..+++.+|.+.
T Consensus 356 Gr~avVlP~g~Lf~~~~~~~iRk~Lle~~~l~aII~LP~~~F~~~tgi~t~Il~~~K~~~ 415 (530)
T 3ufb_A 356 GRAAVVVPNGTLFSDGISARIKEELLKNFNLHTIVRLPEGVFAPYTDIAGNLLFFDRSGP 415 (530)
T ss_dssp CEEEEEEEHHHHHCCTHHHHHHHHHHHHSEEEEEEECCTTTTTTTCCCCEEEEEEESSSC
T ss_pred ceEEEEecchhhhccchHHHHHHHHhhcCEEEEEEECCcccCcCCCCCcEEEEEEECCCC
Confidence 9998887531 11111111222 224445565665321 122456668888887654
No 314
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=97.33 E-value=0.00041 Score=71.81 Aligned_cols=81 Identities=19% Similarity=0.244 Sum_probs=61.8
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCCCCCe---------------eEE-e-cc
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSL---------------KVF-N-HL 599 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~d~rl---------------~vf-~-~l 599 (659)
..+.+||.||.|.|.++..+....++.+|++||+||.+++.|++.+ |+ +++ |+. . .+
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl---~~v~~v~gDa~~l~d~~FDvV~~~a~ 197 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV---DGVNVITGDETVIDGLEFDVLMVAAL 197 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC---CSEEEEESCGGGGGGCCCSEEEECTT
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC---CCeEEEECchhhCCCCCcCEEEECCC
Confidence 5678999999997777666556667899999999999999999986 55 233 222 1 12
Q ss_pred c--chhHHHHHHHhhccCCCCcEEEecCc
Q 006149 600 F--CLQLEEDVNLVLFGLSSESCIKDNSF 626 (659)
Q Consensus 600 ~--~~~f~~~~~~~Lf~~~~~g~~~~n~~ 626 (659)
. ...+++.+.++| +|+|.++.+..
T Consensus 198 ~~d~~~~l~el~r~L---kPGG~Lvv~~~ 223 (298)
T 3fpf_A 198 AEPKRRVFRNIHRYV---DTETRIIYRTY 223 (298)
T ss_dssp CSCHHHHHHHHHHHC---CTTCEEEEEEC
T ss_pred ccCHHHHHHHHHHHc---CCCcEEEEEcC
Confidence 1 237899999999 99999887653
No 315
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=97.22 E-value=0.0015 Score=64.27 Aligned_cols=81 Identities=22% Similarity=0.320 Sum_probs=63.8
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCCC--------------CCCeeEE------ecc
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ--------------DKSLKVF------NHL 599 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~~--------------d~rl~vf------~~l 599 (659)
..+.+||-||.|.|.+...+...+|..++++||++|.+++.|++.+.-.. ....|+. .++
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~ 122 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKYDMVVSALSIHHL 122 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSCEEEEEEESCGGGS
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCCceEEEEeCccccC
Confidence 45689999999999999999999999999999999999999999864211 1223333 334
Q ss_pred cch---hHHHHHHHhhccCCCCcEEEe
Q 006149 600 FCL---QLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 600 ~~~---~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
... .+.+.++++| +|+|.+..
T Consensus 123 ~~~~~~~~l~~~~~~L---kpgG~l~~ 146 (234)
T 3dtn_A 123 EDEDKKELYKRSYSIL---KESGIFIN 146 (234)
T ss_dssp CHHHHHHHHHHHHHHE---EEEEEEEE
T ss_pred CHHHHHHHHHHHHHhc---CCCcEEEE
Confidence 322 4889999999 99998875
No 316
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=97.20 E-value=0.0015 Score=61.14 Aligned_cols=83 Identities=13% Similarity=0.041 Sum_probs=63.4
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCC------C---------CCeeEE---ecc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQ------D---------KSLKVF---NHL 599 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~------d---------~rl~vf---~~l 599 (659)
...+||-||.|.|.+...+...+|..++++||++|.+++.|++.+ +++. | +..|+. ..+
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~~~ 104 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGL 104 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC-T
T ss_pred CCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECCcc
Confidence 346999999999999999999999999999999999999999764 3320 0 222322 112
Q ss_pred cchhHHHHHHHhhccCCCCcEEEecCc
Q 006149 600 FCLQLEEDVNLVLFGLSSESCIKDNSF 626 (659)
Q Consensus 600 ~~~~f~~~~~~~Lf~~~~~g~~~~n~~ 626 (659)
....+.+.+.++| +++|.++...+
T Consensus 105 ~~~~~l~~~~~~L---~~gG~l~~~~~ 128 (178)
T 3hm2_A 105 TAPGVFAAAWKRL---PVGGRLVANAV 128 (178)
T ss_dssp TCTTHHHHHHHTC---CTTCEEEEEEC
T ss_pred cHHHHHHHHHHhc---CCCCEEEEEee
Confidence 2356889999999 99998887653
No 317
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=97.16 E-value=0.00086 Score=66.91 Aligned_cols=81 Identities=12% Similarity=0.236 Sum_probs=63.4
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCC-CccEEEEecChhHHHHHHhhc---CCCCCCCeeE--------------------
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKV-------------------- 595 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p-~~~i~~VEiDp~V~~vA~~~F---gl~~d~rl~v-------------------- 595 (659)
..+++||-||.|.|..+.++...+| +.++++||+||.++++|+++| |+. +|+++
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~--~~i~~~~gda~~~l~~l~~~~~~~~ 146 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVE--HKINFIESDAMLALDNLLQGQESEG 146 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG--GGEEEEESCHHHHHHHHHHSTTCTT
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEEcCHHHHHHHHHhccCCCC
Confidence 3567999999999999999999887 789999999999999999998 542 23321
Q ss_pred -Eecc-------cchhHHHHHHHhhccCCCCcEEEe-cC
Q 006149 596 -FNHL-------FCLQLEEDVNLVLFGLSSESCIKD-NS 625 (659)
Q Consensus 596 -f~~l-------~~~~f~~~~~~~Lf~~~~~g~~~~-n~ 625 (659)
|+-+ ....+++.+.++| +++|+++. |+
T Consensus 147 ~fD~I~~d~~~~~~~~~l~~~~~~L---~pGG~lv~d~~ 182 (237)
T 3c3y_A 147 SYDFGFVDADKPNYIKYHERLMKLV---KVGGIVAYDNT 182 (237)
T ss_dssp CEEEEEECSCGGGHHHHHHHHHHHE---EEEEEEEEECT
T ss_pred CcCEEEECCchHHHHHHHHHHHHhc---CCCeEEEEecC
Confidence 2111 2356788899999 99998876 54
No 318
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.14 E-value=0.0034 Score=64.11 Aligned_cols=103 Identities=14% Similarity=0.063 Sum_probs=68.4
Q ss_pred CCCCeEEEECC------CcchHHHHHHHcCC--CeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCcccEE
Q 006149 67 SPPPQILVPGC------GNSRLSEHLYDAGF--HGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVI 138 (659)
Q Consensus 67 ~~~~~ILDiGC------G~G~~s~~La~~g~--~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDvV 138 (659)
+-+.+|||+|+ -+|.. .+.+.+. +.|+++|+.+-. .... .++++|...... .++||+|
T Consensus 108 p~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~----------sda~-~~IqGD~~~~~~-~~k~DLV 173 (344)
T 3r24_A 108 PYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFV----------SDAD-STLIGDCATVHT-ANKWDLI 173 (344)
T ss_dssp CTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCB----------CSSS-EEEESCGGGEEE-SSCEEEE
T ss_pred cCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcccc----------cCCC-eEEEcccccccc-CCCCCEE
Confidence 35789999996 66663 2323222 389999998821 1122 559999876543 4889999
Q ss_pred EecccccccC--Cccc--chHHHHHHHHHHHhccccCeEEEEEEcCCch
Q 006149 139 LDKGGLDALM--EPEL--GHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (659)
Q Consensus 139 i~~g~l~~l~--~~~~--~~~~~~~~l~ei~rvLkpGG~lvi~~~~~~~ 183 (659)
++-.+-.... +.+. .....+.++.-+.++|+|||.|++=.+..++
T Consensus 174 ISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg 222 (344)
T 3r24_A 174 ISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW 222 (344)
T ss_dssp EECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC
T ss_pred EecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC
Confidence 9743322111 1111 1225889999999999999999998886655
No 319
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.11 E-value=0.0025 Score=61.41 Aligned_cols=82 Identities=20% Similarity=0.106 Sum_probs=63.2
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCC--------------CCCCeeEE-ecc---
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFT--------------QDKSLKVF-NHL--- 599 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~--------------~d~rl~vf-~~l--- 599 (659)
...+||-||.|.|.+...+....|..++++||++|.+++.|++.+ |+. ..+..|+. ...
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~ 119 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGG 119 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESCCTT
T ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECCCCc
Confidence 456899999999999999999999899999999999999999865 331 00122222 111
Q ss_pred cchhHHHHHHHhhccCCCCcEEEecC
Q 006149 600 FCLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 600 ~~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
....+.+.+.++| +++|.++...
T Consensus 120 ~~~~~l~~~~~~L---kpgG~l~~~~ 142 (204)
T 3e05_A 120 MLEEIIDAVDRRL---KSEGVIVLNA 142 (204)
T ss_dssp CHHHHHHHHHHHC---CTTCEEEEEE
T ss_pred CHHHHHHHHHHhc---CCCeEEEEEe
Confidence 2457888999999 9999888765
No 320
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=97.10 E-value=0.0031 Score=61.32 Aligned_cols=82 Identities=17% Similarity=0.166 Sum_probs=63.1
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCCC----------------------CCCeeEE--
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ----------------------DKSLKVF-- 596 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~~----------------------d~rl~vf-- 596 (659)
.+.+||-||.|.|.+...+....|..++++||+++.+++.|++.+.... +...|+.
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 108 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATV 108 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEee
Confidence 4579999999999999999998888899999999999999998863211 0122322
Q ss_pred ----ecccc---hhHHHHHHHhhccCCCCcEEEecC
Q 006149 597 ----NHLFC---LQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 597 ----~~l~~---~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
.|+.. ..+.+.+.++| +|+|+++...
T Consensus 109 ~~~l~~~~~~~~~~~l~~~~~~L---kpgG~li~~~ 141 (217)
T 3jwh_A 109 IEVIEHLDLSRLGAFERVLFEFA---QPKIVIVTTP 141 (217)
T ss_dssp ESCGGGCCHHHHHHHHHHHHTTT---CCSEEEEEEE
T ss_pred HHHHHcCCHHHHHHHHHHHHHHc---CCCEEEEEcc
Confidence 34432 57788899999 9999776644
No 321
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.09 E-value=0.0011 Score=68.59 Aligned_cols=61 Identities=15% Similarity=0.082 Sum_probs=48.8
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCC
Q 006149 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSD 117 (659)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~ 117 (659)
.+...+.+... .+++.|||++||+|..+..++..|. +++|+|+++.+++.++++.....+.
T Consensus 223 ~l~~~~i~~~~----~~~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~~~a~~r~~~~~~~ 283 (297)
T 2zig_A 223 ELAERLVRMFS----FVGDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYAQLAKERFAREVPG 283 (297)
T ss_dssp HHHHHHHHHHC----CTTCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHhC----CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHHhccc
Confidence 44555555554 3788999999999999999998886 9999999999999998877554333
No 322
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=97.08 E-value=0.002 Score=62.93 Aligned_cols=80 Identities=13% Similarity=0.118 Sum_probs=63.4
Q ss_pred CCCeEEEEccCcchHHHHHHhhCC-CccEEEEecChhHHHHHHhhc---CCCCCCCeeE-------------------Ee
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKV-------------------FN 597 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p-~~~i~~VEiDp~V~~vA~~~F---gl~~d~rl~v-------------------f~ 597 (659)
.+.+||-||.|.|..+.++...+| +.++++||++|.+++.|++++ |+. +++++ |+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLN--DRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 457999999999999999999988 789999999999999999987 443 23322 22
Q ss_pred cc-------cchhHHHHHHHhhccCCCCcEEEecC
Q 006149 598 HL-------FCLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 598 ~l-------~~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
-+ ....+++.+.++| +++|+++.+.
T Consensus 136 ~v~~d~~~~~~~~~l~~~~~~L---~pgG~lv~~~ 167 (223)
T 3duw_A 136 FIFIDADKQNNPAYFEWALKLS---RPGTVIIGDN 167 (223)
T ss_dssp EEEECSCGGGHHHHHHHHHHTC---CTTCEEEEES
T ss_pred EEEEcCCcHHHHHHHHHHHHhc---CCCcEEEEeC
Confidence 11 2356788899999 9999887743
No 323
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=97.05 E-value=0.0016 Score=65.41 Aligned_cols=79 Identities=13% Similarity=0.160 Sum_probs=62.7
Q ss_pred CCCeEEEEccCcchHHHHHHhhCC-CccEEEEecChhHHHHHHhhc---CCCCCCCeeE-----------------Eecc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKV-----------------FNHL 599 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p-~~~i~~VEiDp~V~~vA~~~F---gl~~d~rl~v-----------------f~~l 599 (659)
.+.+||-||.|.|....++...+| ..+|++||++|.+++.|++.+ |+. +++++ |+-+
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~--~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVD--QRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCT--TTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 457999999999999999999988 789999999999999999998 543 23321 1111
Q ss_pred -------cchhHHHHHHHhhccCCCCcEEEec
Q 006149 600 -------FCLQLEEDVNLVLFGLSSESCIKDN 624 (659)
Q Consensus 600 -------~~~~f~~~~~~~Lf~~~~~g~~~~n 624 (659)
....+++.+.++| +|+|+++.+
T Consensus 141 ~~d~~~~~~~~~l~~~~~~L---kpGG~lv~~ 169 (248)
T 3tfw_A 141 FIDADKPNNPHYLRWALRYS---RPGTLIIGD 169 (248)
T ss_dssp EECSCGGGHHHHHHHHHHTC---CTTCEEEEE
T ss_pred EECCchHHHHHHHHHHHHhc---CCCeEEEEe
Confidence 2346888999999 999988763
No 324
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.03 E-value=0.00079 Score=66.61 Aligned_cols=79 Identities=13% Similarity=0.232 Sum_probs=61.3
Q ss_pred CeEEEEccCcchHHHHHHhhCC-CccEEEEecChhHHHHHHhhc---CCCCCCCeeE----------------Eecc---
Q 006149 543 VKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKV----------------FNHL--- 599 (659)
Q Consensus 543 ~~vLiiGlGgG~l~~~l~~~~p-~~~i~~VEiDp~V~~vA~~~F---gl~~d~rl~v----------------f~~l--- 599 (659)
.+||-||.|.|..+.++...+| +.+|++||+||.+++.|+++| |+. ++|+++ |+-+
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~-~~~i~~~~gda~~~l~~~~~~~fD~V~~d 136 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYS-PSRVRFLLSRPLDVMSRLANDSYQLVFGQ 136 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCC-GGGEEEECSCHHHHGGGSCTTCEEEEEEC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-cCcEEEEEcCHHHHHHHhcCCCcCeEEEc
Confidence 3999999999999999998875 789999999999999999998 332 123322 2111
Q ss_pred ----cchhHHHHHHHhhccCCCCcEEEecC
Q 006149 600 ----FCLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 600 ----~~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
....+++.+.++| +|+|+++.+.
T Consensus 137 ~~~~~~~~~l~~~~~~L---kpGG~lv~dn 163 (221)
T 3dr5_A 137 VSPMDLKALVDAAWPLL---RRGGALVLAD 163 (221)
T ss_dssp CCTTTHHHHHHHHHHHE---EEEEEEEETT
T ss_pred CcHHHHHHHHHHHHHHc---CCCcEEEEeC
Confidence 1346888999999 9999888744
No 325
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=96.90 E-value=0.0022 Score=64.46 Aligned_cols=79 Identities=13% Similarity=0.155 Sum_probs=61.8
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCC-CccEEEEecChhHHHHHHhhc---CCCCCCCeeE--------------------
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKV-------------------- 595 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p-~~~i~~VEiDp~V~~vA~~~F---gl~~d~rl~v-------------------- 595 (659)
..+.+||-||.|.|....++...+| +.++++||+|+.++++|+++| |+. +++++
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~--~~i~~~~gda~~~l~~l~~~~~~~~ 155 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVD--HKIDFREGPALPVLDEMIKDEKNHG 155 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCG--GGEEEEESCHHHHHHHHHHSGGGTT
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CCeEEEECCHHHHHHHHHhccCCCC
Confidence 3567999999999999999999987 789999999999999999987 431 22211
Q ss_pred -Eecc-------cchhHHHHHHHhhccCCCCcEEEe
Q 006149 596 -FNHL-------FCLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 596 -f~~l-------~~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
|+-+ ....+++.+.++| +++|+++.
T Consensus 156 ~fD~V~~d~~~~~~~~~l~~~~~~L---kpGG~lv~ 188 (247)
T 1sui_A 156 SYDFIFVDADKDNYLNYHKRLIDLV---KVGGVIGY 188 (247)
T ss_dssp CBSEEEECSCSTTHHHHHHHHHHHB---CTTCCEEE
T ss_pred CEEEEEEcCchHHHHHHHHHHHHhC---CCCeEEEE
Confidence 1111 2356788899999 99998876
No 326
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=96.89 E-value=0.0026 Score=61.86 Aligned_cols=81 Identities=20% Similarity=0.221 Sum_probs=62.7
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCC---C-------------------CCCCeeEE-
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF---T-------------------QDKSLKVF- 596 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl---~-------------------~d~rl~vf- 596 (659)
..+.+||-||.|.|.+...+....|..++++||+++.+++.|++.+.. + .+...|+.
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 345799999999999999999998888999999999999999987631 1 01123332
Q ss_pred -----ecccc---hhHHHHHHHhhccCCCCcEEEe
Q 006149 597 -----NHLFC---LQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 597 -----~~l~~---~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
.|+.. ..+.+.+.++| +|+|+++.
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~L---kpgG~~i~ 139 (219)
T 3jwg_A 108 VIEVIEHLDENRLQAFEKVLFEFT---RPQTVIVS 139 (219)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTT---CCSEEEEE
T ss_pred EHHHHHhCCHHHHHHHHHHHHHhh---CCCEEEEE
Confidence 44532 47888899999 99997765
No 327
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=96.89 E-value=0.004 Score=63.18 Aligned_cols=79 Identities=10% Similarity=0.087 Sum_probs=58.7
Q ss_pred CCeEEEEccCcchHHHHHHhhC--CCccEEEEecChhHHHHHHhhcCC-CCCCCe---------------eEE------e
Q 006149 542 SVKAVVIGLGAGLLPMFLHECM--PFVGIEAVELDLTMLNLAEDYFGF-TQDKSL---------------KVF------N 597 (659)
Q Consensus 542 ~~~vLiiGlGgG~l~~~l~~~~--p~~~i~~VEiDp~V~~vA~~~Fgl-~~d~rl---------------~vf------~ 597 (659)
..+||=||.|.|.+...|.+.+ |+++|++||++|.+++.||+.+.- ....++ |+. .
T Consensus 71 ~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~~l~ 150 (261)
T 4gek_A 71 GTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNFTLQ 150 (261)
T ss_dssp TCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEESCGG
T ss_pred CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeeeeee
Confidence 4689999999999999998875 578999999999999999987521 111222 222 2
Q ss_pred ccc---chhHHHHHHHhhccCCCCcEEEe
Q 006149 598 HLF---CLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 598 ~l~---~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
++- -..+++.++++| +|+|.++.
T Consensus 151 ~~~~~~~~~~l~~i~~~L---kpGG~lii 176 (261)
T 4gek_A 151 FLEPSERQALLDKIYQGL---NPGGALVL 176 (261)
T ss_dssp GSCHHHHHHHHHHHHHHE---EEEEEEEE
T ss_pred ecCchhHhHHHHHHHHHc---CCCcEEEE
Confidence 221 134688899999 99997765
No 328
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=96.80 E-value=0.0018 Score=65.51 Aligned_cols=81 Identities=21% Similarity=0.265 Sum_probs=63.9
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCC--------------CCCCeeEE------
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFT--------------QDKSLKVF------ 596 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~--------------~d~rl~vf------ 596 (659)
+...+||-||.|.|.+...+...+|..++++||++|.+++.|++.+ +++ ++...|+.
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 115 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVL 115 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechh
Confidence 4557999999999999999999999999999999999999999875 221 12233433
Q ss_pred ecc-cchhHHHHHHHhhccCCCCcEEEe
Q 006149 597 NHL-FCLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 597 ~~l-~~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
.++ ....+.+.++++| +|+|.+..
T Consensus 116 ~~~~~~~~~l~~~~~~L---~pgG~l~~ 140 (276)
T 3mgg_A 116 EHLQSPEEALKSLKKVL---KPGGTITV 140 (276)
T ss_dssp GGCSCHHHHHHHHHHHE---EEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHc---CCCcEEEE
Confidence 233 2357889999999 99998876
No 329
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=96.79 E-value=0.001 Score=63.94 Aligned_cols=47 Identities=21% Similarity=0.367 Sum_probs=32.6
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG 586 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg 586 (659)
..+.+||-||.|.|.+...+...+|..++++||++|.+++.|++.+.
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~ 75 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAE 75 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC------------
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHH
Confidence 45679999999999999999999999999999999999999998764
No 330
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=96.78 E-value=0.0029 Score=62.65 Aligned_cols=80 Identities=16% Similarity=0.200 Sum_probs=61.9
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCC-----------------CCCeeEE--ec
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQ-----------------DKSLKVF--NH 598 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~-----------------d~rl~vf--~~ 598 (659)
.+.+||-||.|.|.+..++...+|..++++||++|.+++.|++.+ |+.+ +...|+. +.
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~ 150 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA 150 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC
Confidence 457999999999999999999888899999999999999999987 4321 1122222 01
Q ss_pred --ccchhHHHHHHHhhccCCCCcEEEe
Q 006149 599 --LFCLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 599 --l~~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
-....+++.+.++| +|+|+++.
T Consensus 151 ~~~~~~~~l~~~~~~L---kpgG~lv~ 174 (232)
T 3ntv_A 151 AKAQSKKFFEIYTPLL---KHQGLVIT 174 (232)
T ss_dssp TSSSHHHHHHHHGGGE---EEEEEEEE
T ss_pred cHHHHHHHHHHHHHhc---CCCeEEEE
Confidence 12356788899999 99998877
No 331
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=96.78 E-value=0.0047 Score=65.41 Aligned_cols=80 Identities=18% Similarity=0.216 Sum_probs=61.4
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCCCCCCee---------------EE--ecc---
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLK---------------VF--NHL--- 599 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~~d~rl~---------------vf--~~l--- 599 (659)
....+|+=||+|.|.+...|.+.+|++++++.|+ |.|++.|+++......+|++ ++ .++
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~~~D~~~~~~vlh~ 256 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADLYILARVLHD 256 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCCCCSEEEEESSGGG
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCCCceEEEeeeeccc
Confidence 3456899999999999999999999999999998 89999999998655555662 22 111
Q ss_pred ----cchhHHHHHHHhhccCCCCcEEEe
Q 006149 600 ----FCLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 600 ----~~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
......+.|+++| +|+|.+.+
T Consensus 257 ~~d~~~~~iL~~~~~al---~pgg~lli 281 (353)
T 4a6d_A 257 WADGKCSHLLERIYHTC---KPGGGILV 281 (353)
T ss_dssp SCHHHHHHHHHHHHHHC---CTTCEEEE
T ss_pred CCHHHHHHHHHHHHhhC---CCCCEEEE
Confidence 1246678899999 99995443
No 332
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=96.77 E-value=0.0025 Score=65.49 Aligned_cols=45 Identities=11% Similarity=0.183 Sum_probs=41.9
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF 585 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F 585 (659)
...+||-||.|.|.+...|...++..+|++||||+.+++.|++..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~ 90 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNI 90 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHH
Confidence 467999999999999999999998889999999999999999864
No 333
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=96.71 E-value=0.0036 Score=62.11 Aligned_cols=45 Identities=18% Similarity=0.285 Sum_probs=41.5
Q ss_pred CCCeEEEEccCcchHHHHHHhhCC-CccEEEEecChhHHHHHHhhc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF 585 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p-~~~i~~VEiDp~V~~vA~~~F 585 (659)
.+.+||-||.|.|.+..++...+| ..++++||+||.+++.|++.+
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~ 105 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYW 105 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHH
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH
Confidence 357999999999999999999987 689999999999999999986
No 334
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=96.71 E-value=0.0041 Score=61.28 Aligned_cols=81 Identities=14% Similarity=0.149 Sum_probs=61.9
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCC------------------CCCeeEE-e-
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQ------------------DKSLKVF-N- 597 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~------------------d~rl~vf-~- 597 (659)
.+.+||-||.|.|.+...+...+|..++++||++|..++.|++.+ |+.. +...|+. .
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 133 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFID 133 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEEC
Confidence 356999999999999999999999889999999999999999986 4321 1122222 1
Q ss_pred cc--cchhHHHHHHHhhccCCCCcEEEec
Q 006149 598 HL--FCLQLEEDVNLVLFGLSSESCIKDN 624 (659)
Q Consensus 598 ~l--~~~~f~~~~~~~Lf~~~~~g~~~~n 624 (659)
.. ....+++.+.++| +++|.++..
T Consensus 134 ~~~~~~~~~l~~~~~~L---~pgG~lv~~ 159 (233)
T 2gpy_A 134 AAKGQYRRFFDMYSPMV---RPGGLILSD 159 (233)
T ss_dssp GGGSCHHHHHHHHGGGE---EEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHc---CCCeEEEEE
Confidence 11 1257778888999 999988764
No 335
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=96.68 E-value=0.0093 Score=57.78 Aligned_cols=79 Identities=18% Similarity=0.112 Sum_probs=59.7
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC--CC----------CCCCeeEE------ecccc-
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG--FT----------QDKSLKVF------NHLFC- 601 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg--l~----------~d~rl~vf------~~l~~- 601 (659)
...+||-||.|.|.+...+... +.++++||+++.+++.|++.+. +. .....|+. .|+-.
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~ 122 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVPTSIDTIVSTYAFHHLTDD 122 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCCSCCSEEEEESCGGGSCHH
T ss_pred CCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCCCCeEEEEECcchhcCChH
Confidence 4579999999999999999887 4699999999999999999875 10 01223332 33332
Q ss_pred --hhHHHHHHHhhccCCCCcEEEec
Q 006149 602 --LQLEEDVNLVLFGLSSESCIKDN 624 (659)
Q Consensus 602 --~~f~~~~~~~Lf~~~~~g~~~~n 624 (659)
..+.+.+.++| +|+|.+...
T Consensus 123 ~~~~~l~~~~~~L---kpgG~l~i~ 144 (220)
T 3hnr_A 123 EKNVAIAKYSQLL---NKGGKIVFA 144 (220)
T ss_dssp HHHHHHHHHHHHS---CTTCEEEEE
T ss_pred HHHHHHHHHHHhc---CCCCEEEEE
Confidence 23888999999 999988764
No 336
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=96.67 E-value=0.0035 Score=63.08 Aligned_cols=82 Identities=13% Similarity=0.273 Sum_probs=64.0
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC-----------CC-CCCCeeEEecccchhHHHHH
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG-----------FT-QDKSLKVFNHLFCLQLEEDV 608 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg-----------l~-~d~rl~vf~~l~~~~f~~~~ 608 (659)
...+||.||.|.|.+...+...+|..++++||+++.+++.|++.+. ++ .+...|+.-..+...+.+.+
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~l~~~ 164 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPCKAEEL 164 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCCCCHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCChhhHHHH
Confidence 4579999999999999999998888899999999999999998652 11 12234544334556788999
Q ss_pred HHhhccCCCCcEEEecC
Q 006149 609 NLVLFGLSSESCIKDNS 625 (659)
Q Consensus 609 ~~~Lf~~~~~g~~~~n~ 625 (659)
.++| +|+|.++...
T Consensus 165 ~~~L---~pgG~l~~~~ 178 (269)
T 1p91_A 165 ARVV---KPGGWVITAT 178 (269)
T ss_dssp HHHE---EEEEEEEEEE
T ss_pred HHhc---CCCcEEEEEE
Confidence 9999 9999776643
No 337
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=96.67 E-value=0.0038 Score=62.13 Aligned_cols=83 Identities=16% Similarity=0.169 Sum_probs=64.1
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC-----------CCCCCCeeEE------ecc-cc
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG-----------FTQDKSLKVF------NHL-FC 601 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg-----------l~~d~rl~vf------~~l-~~ 601 (659)
..+.+||-||.|.|.+...+...+|..++++||+++.+++.|++... ++.+...|+. .++ ..
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~ 111 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWKPAQKADLLYANAVFQWVPDH 111 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCCCSSCEEEEEEESCGGGSTTH
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcCccCCcCEEEEeCchhhCCCH
Confidence 34579999999999999999999888999999999999999987631 1122344543 233 23
Q ss_pred hhHHHHHHHhhccCCCCcEEEecC
Q 006149 602 LQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 602 ~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
..+...+.++| +|+|.+....
T Consensus 112 ~~~l~~~~~~L---~pgG~l~~~~ 132 (259)
T 2p35_A 112 LAVLSQLMDQL---ESGGVLAVQM 132 (259)
T ss_dssp HHHHHHHGGGE---EEEEEEEEEE
T ss_pred HHHHHHHHHhc---CCCeEEEEEe
Confidence 66788899999 9999887754
No 338
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=96.67 E-value=0.0011 Score=66.37 Aligned_cols=78 Identities=14% Similarity=0.198 Sum_probs=61.9
Q ss_pred CCCeEEEEccCcchHHHHHHhhCC-CccEEEEecChhHHHHHHhhc---CCCCCCCeeE--------------------E
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKV--------------------F 596 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p-~~~i~~VEiDp~V~~vA~~~F---gl~~d~rl~v--------------------f 596 (659)
.+.+||-||.|.|..+.++...+| +.+|++||++|.++++|++.+ |+. +++++ |
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~--~~i~~~~gda~~~l~~~~~~~~~~~f 137 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQE--HKIKLRLGPALDTLHSLLNEGGEHQF 137 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCT--TTEEEEESCHHHHHHHHHHHHCSSCE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEEcCHHHHHHHHhhccCCCCE
Confidence 457999999999999999999886 789999999999999999998 543 23321 2
Q ss_pred ecc-------cchhHHHHHHHhhccCCCCcEEEe
Q 006149 597 NHL-------FCLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 597 ~~l-------~~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
+-+ ....+++.+.++| +|+|+++.
T Consensus 138 D~V~~d~~~~~~~~~l~~~~~~L---kpGG~lv~ 168 (242)
T 3r3h_A 138 DFIFIDADKTNYLNYYELALKLV---TPKGLIAI 168 (242)
T ss_dssp EEEEEESCGGGHHHHHHHHHHHE---EEEEEEEE
T ss_pred eEEEEcCChHHhHHHHHHHHHhc---CCCeEEEE
Confidence 111 2456788899999 99998876
No 339
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=96.67 E-value=0.0021 Score=64.74 Aligned_cols=82 Identities=11% Similarity=0.103 Sum_probs=64.1
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCC---------------CCCeeEE-----
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQ---------------DKSLKVF----- 596 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~---------------d~rl~vf----- 596 (659)
..+.+||-||.|.|.+...+... +..++++||++|.+++.|++.+ |+++ +...|+.
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~ 123 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGA 123 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSC
T ss_pred CCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCC
Confidence 44579999999999999999988 7789999999999999999875 3321 2233433
Q ss_pred -ecccchhHHHHHHHhhccCCCCcEEEecC
Q 006149 597 -NHLFCLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 597 -~~l~~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
.++....+.+.+.++| +|+|.++...
T Consensus 124 ~~~~~~~~~l~~~~~~L---kpgG~l~~~~ 150 (267)
T 3kkz_A 124 IYNIGFERGLNEWRKYL---KKGGYLAVSE 150 (267)
T ss_dssp GGGTCHHHHHHHHGGGE---EEEEEEEEEE
T ss_pred ceecCHHHHHHHHHHHc---CCCCEEEEEE
Confidence 3455567888999999 9999887643
No 340
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=96.62 E-value=0.0046 Score=60.57 Aligned_cols=78 Identities=17% Similarity=0.199 Sum_probs=60.9
Q ss_pred CCCeEEEEccCcchHHHHHHhhCC-CccEEEEecChhHHHHHHhhc---CCCCCCCeeE--------------------E
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKV--------------------F 596 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p-~~~i~~VEiDp~V~~vA~~~F---gl~~d~rl~v--------------------f 596 (659)
.+.+||-||.|.|.++..+.+.+| ..++++||++|.+++.|++.| |+. +++++ |
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~--~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAE--HKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCT--TTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC--CeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 457999999999999999999887 789999999999999999987 442 22211 2
Q ss_pred ecc-------cchhHHHHHHHhhccCCCCcEEEe
Q 006149 597 NHL-------FCLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 597 ~~l-------~~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
+-+ ....+++.+.++| +++|+++.
T Consensus 147 D~v~~d~~~~~~~~~l~~~~~~L---~pgG~lv~ 177 (229)
T 2avd_A 147 DVAVVDADKENCSAYYERCLQLL---RPGGILAV 177 (229)
T ss_dssp EEEEECSCSTTHHHHHHHHHHHE---EEEEEEEE
T ss_pred cEEEECCCHHHHHHHHHHHHHHc---CCCeEEEE
Confidence 111 1246788888999 99998876
No 341
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=96.62 E-value=0.0066 Score=58.99 Aligned_cols=82 Identities=16% Similarity=0.217 Sum_probs=62.8
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCC----------------CCCCeeEE-ec--
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFT----------------QDKSLKVF-NH-- 598 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~----------------~d~rl~vf-~~-- 598 (659)
...+||-||.|.|.+...+...+|+.++++||+++.+++.|++.+ |+. .+..+|+. ..
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 346899999999999999999999999999999999999998864 321 01122322 11
Q ss_pred ------------ccchhHHHHHHHhhccCCCCcEEEecC
Q 006149 599 ------------LFCLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 599 ------------l~~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
+....+.+.+.++| +++|++...+
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~L---kpgG~l~~~~ 156 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRIL---PENGEIHFKT 156 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHS---CTTCEEEEEE
T ss_pred CCccccchhhhccCCHHHHHHHHHHc---CCCcEEEEEe
Confidence 12257999999999 9999887755
No 342
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=96.60 E-value=0.0032 Score=61.55 Aligned_cols=79 Identities=16% Similarity=0.247 Sum_probs=62.0
Q ss_pred CCCeEEEEccCcchHHHHHHhhCC-CccEEEEecChhHHHHHHhhc---CCCCCCCeeE--------------------E
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKV--------------------F 596 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p-~~~i~~VEiDp~V~~vA~~~F---gl~~d~rl~v--------------------f 596 (659)
.+.+||-||.|.|..+.++...+| ..++++||+++.+++.|++.+ |+. +++++ |
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLS--DKIGLRLSPAKDTLAELIHAGQAWQY 141 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEESCHHHHHHHHHTTTCTTCE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCC--CceEEEeCCHHHHHHHhhhccCCCCc
Confidence 457999999999999999999887 789999999999999999987 443 22211 2
Q ss_pred ecc-------cchhHHHHHHHhhccCCCCcEEEec
Q 006149 597 NHL-------FCLQLEEDVNLVLFGLSSESCIKDN 624 (659)
Q Consensus 597 ~~l-------~~~~f~~~~~~~Lf~~~~~g~~~~n 624 (659)
+-+ ....+++.+.++| +++|+++.+
T Consensus 142 D~v~~~~~~~~~~~~l~~~~~~L---~pgG~lv~~ 173 (225)
T 3tr6_A 142 DLIYIDADKANTDLYYEESLKLL---REGGLIAVD 173 (225)
T ss_dssp EEEEECSCGGGHHHHHHHHHHHE---EEEEEEEEE
T ss_pred cEEEECCCHHHHHHHHHHHHHhc---CCCcEEEEe
Confidence 111 2456788899999 999988763
No 343
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=96.59 E-value=0.0062 Score=63.60 Aligned_cols=80 Identities=14% Similarity=0.036 Sum_probs=61.6
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCC------------CC-CeeEE------e
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQ------------DK-SLKVF------N 597 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~------------d~-rl~vf------~ 597 (659)
....+||-||.|.|.+...+.+.+|..+++++|+ |.+++.|++.+ ++.+ -+ ..|++ .
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~~~D~v~~~~vlh 246 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPAGAGGYVLSAVLH 246 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCSCSEEEEESCGG
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCCCCcEEEEehhhc
Confidence 3457999999999999999999999999999999 99999999875 2210 01 33443 1
Q ss_pred cccc---hhHHHHHHHhhccCCCCcEEEe
Q 006149 598 HLFC---LQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 598 ~l~~---~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
++-. ..+.+.++++| +|+|.+..
T Consensus 247 ~~~~~~~~~~l~~~~~~L---~pgG~l~i 272 (332)
T 3i53_A 247 DWDDLSAVAILRRCAEAA---GSGGVVLV 272 (332)
T ss_dssp GSCHHHHHHHHHHHHHHH---TTTCEEEE
T ss_pred cCCHHHHHHHHHHHHHhc---CCCCEEEE
Confidence 2222 57888999999 99997755
No 344
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=96.55 E-value=0.015 Score=56.35 Aligned_cols=81 Identities=12% Similarity=-0.005 Sum_probs=60.3
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCCC---------------CCeeEE--eccc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQD---------------KSLKVF--NHLF 600 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~d---------------~rl~vf--~~l~ 600 (659)
...+||-||.|.|.+...+... ..+|++||++|.+++.|++.+ |++.. +..|+. ..-.
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~ 132 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGGG 132 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSCC
T ss_pred CCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCcc
Confidence 4468999999999999999887 579999999999999999874 44311 112221 1112
Q ss_pred chhHHHHHHHhhccCCCCcEEEecCc
Q 006149 601 CLQLEEDVNLVLFGLSSESCIKDNSF 626 (659)
Q Consensus 601 ~~~f~~~~~~~Lf~~~~~g~~~~n~~ 626 (659)
..++.+.+.++| +++|.++....
T Consensus 133 ~~~~l~~~~~~L---kpgG~lv~~~~ 155 (204)
T 3njr_A 133 SQALYDRLWEWL---APGTRIVANAV 155 (204)
T ss_dssp CHHHHHHHHHHS---CTTCEEEEEEC
T ss_pred cHHHHHHHHHhc---CCCcEEEEEec
Confidence 333889999999 99998887663
No 345
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=96.53 E-value=0.0021 Score=65.21 Aligned_cols=79 Identities=16% Similarity=0.082 Sum_probs=61.7
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCC-----------CCCCeeEE------ecccch
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-----------QDKSLKVF------NHLFCL 602 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~-----------~d~rl~vf------~~l~~~ 602 (659)
+...+||=||.|.|.++..|..++ .+|++||+++.+++.|+++-++. ++...|+. .++-..
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~~~~ 115 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAMHWFDLD 115 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCCTTCCHH
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeehhHhhHH
Confidence 445789999999999999999887 47999999999999998763221 12334433 344567
Q ss_pred hHHHHHHHhhccCCCCcEEEe
Q 006149 603 QLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 603 ~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
.++..++++| +|+|+++.
T Consensus 116 ~~~~e~~rvL---kpgG~l~~ 133 (257)
T 4hg2_A 116 RFWAELRRVA---RPGAVFAA 133 (257)
T ss_dssp HHHHHHHHHE---EEEEEEEE
T ss_pred HHHHHHHHHc---CCCCEEEE
Confidence 8999999999 99998865
No 346
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=96.53 E-value=0.005 Score=61.39 Aligned_cols=81 Identities=15% Similarity=0.146 Sum_probs=62.0
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCC---------------CCCCeeEE------ec
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT---------------QDKSLKVF------NH 598 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~---------------~d~rl~vf------~~ 598 (659)
....+||-||.|.|.+...+...+ ..++++||+++.+++.|++.+.-. ++...|+. .|
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 132 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRDAILA 132 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEESCGGG
T ss_pred CCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHHHHHh
Confidence 345699999999999999999876 579999999999999999886321 12233433 33
Q ss_pred c---cchhHHHHHHHhhccCCCCcEEEec
Q 006149 599 L---FCLQLEEDVNLVLFGLSSESCIKDN 624 (659)
Q Consensus 599 l---~~~~f~~~~~~~Lf~~~~~g~~~~n 624 (659)
+ ....+.+.+.++| +|+|.++..
T Consensus 133 ~~~~~~~~~l~~~~~~L---~pgG~l~~~ 158 (266)
T 3ujc_A 133 LSLENKNKLFQKCYKWL---KPTGTLLIT 158 (266)
T ss_dssp SCHHHHHHHHHHHHHHE---EEEEEEEEE
T ss_pred cChHHHHHHHHHHHHHc---CCCCEEEEE
Confidence 3 2456778899999 999987664
No 347
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=96.52 E-value=0.0062 Score=62.56 Aligned_cols=81 Identities=11% Similarity=0.080 Sum_probs=62.7
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCC------------CCCeeEE------ecc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQ------------DKSLKVF------NHL 599 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~------------d~rl~vf------~~l 599 (659)
...+||-||.|.|.+...+.+.++ .++++||++|.+++.|++.+ |+.. +...|+. .|+
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~~~~~ 150 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPVDRIVSLGAFEHF 150 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCCSEEEEESCGGGT
T ss_pred CcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHcCCCccEEEEcchHHhc
Confidence 446999999999999999999877 69999999999999999886 3321 1222322 334
Q ss_pred cc----------hhHHHHHHHhhccCCCCcEEEecC
Q 006149 600 FC----------LQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 600 ~~----------~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
.. ..+++.+.++| +|+|.++...
T Consensus 151 ~d~~~~~~~~~~~~~l~~~~~~L---kpgG~l~i~~ 183 (302)
T 3hem_A 151 ADGAGDAGFERYDTFFKKFYNLT---PDDGRMLLHT 183 (302)
T ss_dssp TCCSSCCCTTHHHHHHHHHHHSS---CTTCEEEEEE
T ss_pred CccccccchhHHHHHHHHHHHhc---CCCcEEEEEE
Confidence 22 48889999999 9999888755
No 348
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=96.48 E-value=0.0038 Score=62.18 Aligned_cols=81 Identities=16% Similarity=0.190 Sum_probs=63.3
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCC---------------CCCCeeEE-----
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFT---------------QDKSLKVF----- 596 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~---------------~d~rl~vf----- 596 (659)
+...+||-||.|.|.+...+...++. ++++||++|.+++.|++.+ |+. ++...|+.
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 123 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGA 123 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecCh
Confidence 34469999999999999999999986 9999999999999998874 221 12233433
Q ss_pred -ecccchhHHHHHHHhhccCCCCcEEEec
Q 006149 597 -NHLFCLQLEEDVNLVLFGLSSESCIKDN 624 (659)
Q Consensus 597 -~~l~~~~f~~~~~~~Lf~~~~~g~~~~n 624 (659)
.|+....+.+.+.++| +|+|.++..
T Consensus 124 l~~~~~~~~l~~~~~~L---~pgG~l~~~ 149 (257)
T 3f4k_A 124 IYNIGFERGMNEWSKYL---KKGGFIAVS 149 (257)
T ss_dssp SCCCCHHHHHHHHHTTE---EEEEEEEEE
T ss_pred HhhcCHHHHHHHHHHHc---CCCcEEEEE
Confidence 3454567888999999 999988664
No 349
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=96.47 E-value=0.0083 Score=57.78 Aligned_cols=80 Identities=14% Similarity=0.132 Sum_probs=60.9
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCC-------------CCCCeeEE------eccc
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-------------QDKSLKVF------NHLF 600 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~-------------~d~rl~vf------~~l~ 600 (659)
+...+||-||.|.|.+...+... ..++++||+++.+++.|++ .+.+ .+...|+. .|+-
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~-~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l~~~~ 121 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGR-HGLDNVEFRQQDLFDWTPDRQWDAVFFAHWLAHVP 121 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGG-GCCTTEEEEECCTTSCCCSSCEEEEEEESCGGGSC
T ss_pred CCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHh-cCCCCeEEEecccccCCCCCceeEEEEechhhcCC
Confidence 34469999999999999999988 4699999999999999998 3321 12233433 3343
Q ss_pred c---hhHHHHHHHhhccCCCCcEEEecC
Q 006149 601 C---LQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 601 ~---~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
. ..+.+.+.++| +|+|.+....
T Consensus 122 ~~~~~~~l~~~~~~L---~pgG~l~~~~ 146 (218)
T 3ou2_A 122 DDRFEAFWESVRSAV---APGGVVEFVD 146 (218)
T ss_dssp HHHHHHHHHHHHHHE---EEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHc---CCCeEEEEEe
Confidence 3 67889999999 9999887654
No 350
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=96.47 E-value=0.009 Score=58.35 Aligned_cols=82 Identities=13% Similarity=0.095 Sum_probs=62.4
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCC----------------CCCeeEE-ec--
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQ----------------DKSLKVF-NH-- 598 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~----------------d~rl~vf-~~-- 598 (659)
...+||=||-|.|.+...+...+|+.++++||+++.+++.|++.. |++. +..+|.. .+
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 346899999999999999999999999999999999999998764 3320 1112221 00
Q ss_pred ------------ccchhHHHHHHHhhccCCCCcEEEecC
Q 006149 599 ------------LFCLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 599 ------------l~~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
+....|.+.+.++| +|+|.+...+
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~L---kpgG~l~~~t 153 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVM---GKGGSIHFKT 153 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHH---TTSCEEEEEE
T ss_pred CCCcCccccccccCcHHHHHHHHHHc---CCCCEEEEEe
Confidence 22467899999999 9999887644
No 351
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=96.46 E-value=0.0058 Score=60.51 Aligned_cols=81 Identities=15% Similarity=0.135 Sum_probs=61.5
Q ss_pred CCCeEEEEccCcchHHHHHHhhCC-CccEEEEecChhHHHHHHhhc---CCCC-------C--------------CCeeE
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQ-------D--------------KSLKV 595 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p-~~~i~~VEiDp~V~~vA~~~F---gl~~-------d--------------~rl~v 595 (659)
.+.+||-||.|.|..+.++...+| +.++++||++|..++.|+++| |+.. | ...|+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 357999999999999999999887 689999999999999999987 4421 1 22332
Q ss_pred E--ec--ccchhHHHHHHHhhccCCCCcEEEec
Q 006149 596 F--NH--LFCLQLEEDVNLVLFGLSSESCIKDN 624 (659)
Q Consensus 596 f--~~--l~~~~f~~~~~~~Lf~~~~~g~~~~n 624 (659)
. +. -....+++.+.++| +++|+++.+
T Consensus 152 V~~d~~~~~~~~~l~~~~~~L---kpgG~lv~~ 181 (232)
T 3cbg_A 152 IFIDADKRNYPRYYEIGLNLL---RRGGLMVID 181 (232)
T ss_dssp EEECSCGGGHHHHHHHHHHTE---EEEEEEEEE
T ss_pred EEECCCHHHHHHHHHHHHHHc---CCCeEEEEe
Confidence 2 11 11246788888999 999988763
No 352
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=96.45 E-value=0.0033 Score=60.94 Aligned_cols=82 Identities=18% Similarity=0.271 Sum_probs=62.5
Q ss_pred CCCCeEEEEccCcchHHHHHHhhC-CCccEEEEecChhHHHHHHhhc---CCC--------------CCCCeeEE-----
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYF---GFT--------------QDKSLKVF----- 596 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~-p~~~i~~VEiDp~V~~vA~~~F---gl~--------------~d~rl~vf----- 596 (659)
....+||-||.|.|.+...+.... |..++++||+++.+++.|++.+ +++ ++...|+.
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 115 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAFT 115 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEESC
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeehh
Confidence 345699999999999999998886 7789999999999999999876 221 11223433
Q ss_pred -ecc-cchhHHHHHHHhhccCCCCcEEEec
Q 006149 597 -NHL-FCLQLEEDVNLVLFGLSSESCIKDN 624 (659)
Q Consensus 597 -~~l-~~~~f~~~~~~~Lf~~~~~g~~~~n 624 (659)
.++ ....+.+.+.++| +++|.++..
T Consensus 116 l~~~~~~~~~l~~~~~~L---kpgG~l~i~ 142 (219)
T 3dh0_A 116 FHELSEPLKFLEELKRVA---KPFAYLAII 142 (219)
T ss_dssp GGGCSSHHHHHHHHHHHE---EEEEEEEEE
T ss_pred hhhcCCHHHHHHHHHHHh---CCCeEEEEE
Confidence 223 2367889999999 999988764
No 353
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=96.44 E-value=0.0096 Score=57.58 Aligned_cols=81 Identities=12% Similarity=0.040 Sum_probs=62.3
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCC--------------CCCCeeEE------ecc
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT--------------QDKSLKVF------NHL 599 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~--------------~d~rl~vf------~~l 599 (659)
..+.+||-||.|.|.+...+.... .++++||+++.+++.|++.+.-. .+...|+. .|+
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~ 127 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLIVVAEVLYYL 127 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEEEEESCGGGS
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEEEEccHHHhC
Confidence 445799999999999999999885 58999999999999999987421 12233433 344
Q ss_pred cc----hhHHHHHHHhhccCCCCcEEEecC
Q 006149 600 FC----LQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 600 ~~----~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
.. ..+.+.+.++| +++|.+....
T Consensus 128 ~~~~~~~~~l~~~~~~L---~pgG~l~~~~ 154 (216)
T 3ofk_A 128 EDMTQMRTAIDNMVKML---APGGHLVFGS 154 (216)
T ss_dssp SSHHHHHHHHHHHHHTE---EEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHc---CCCCEEEEEe
Confidence 43 36688899999 9999888754
No 354
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=96.44 E-value=0.0085 Score=56.30 Aligned_cols=81 Identities=15% Similarity=0.195 Sum_probs=60.3
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCC---------------CCCeeEE--eccc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQ---------------DKSLKVF--NHLF 600 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~---------------d~rl~vf--~~l~ 600 (659)
...+||-||.|.|.+...+... ..++++||++|.+++.|++.+ ++.. +...|+. ...+
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~ 129 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDRKYNKIITNPPI 129 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTSCEEEEEECCCS
T ss_pred CCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccCCceEEEECCCc
Confidence 4569999999999999999888 569999999999999999886 3321 1122322 1111
Q ss_pred ------chhHHHHHHHhhccCCCCcEEEecCc
Q 006149 601 ------CLQLEEDVNLVLFGLSSESCIKDNSF 626 (659)
Q Consensus 601 ------~~~f~~~~~~~Lf~~~~~g~~~~n~~ 626 (659)
...+.+.+.++| +++|.++...+
T Consensus 130 ~~~~~~~~~~l~~~~~~L---~~gG~l~~~~~ 158 (194)
T 1dus_A 130 RAGKEVLHRIIEEGKELL---KDNGEIWVVIQ 158 (194)
T ss_dssp TTCHHHHHHHHHHHHHHE---EEEEEEEEEEE
T ss_pred ccchhHHHHHHHHHHHHc---CCCCEEEEEEC
Confidence 246788889999 99998877664
No 355
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=96.43 E-value=0.016 Score=57.73 Aligned_cols=83 Identities=19% Similarity=0.232 Sum_probs=63.8
Q ss_pred CCCCeEEEEccCcchHHHHHHhh-CCCccEEEEecChhHHHHHHhhc---CCCC--------------CCCeeE-Eecc-
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHEC-MPFVGIEAVELDLTMLNLAEDYF---GFTQ--------------DKSLKV-FNHL- 599 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~-~p~~~i~~VEiDp~V~~vA~~~F---gl~~--------------d~rl~v-f~~l- 599 (659)
....+||-+|.|.|.+...+... .|..++++||++|.+++.|++.+ |++. +...|+ +.++
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~ 171 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEENVDHVILDLP 171 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCCSEEEEEECSS
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCCCcCEEEECCC
Confidence 34569999999999999999988 78889999999999999999986 5432 011122 1222
Q ss_pred cchhHHHHHHHhhccCCCCcEEEecC
Q 006149 600 FCLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 600 ~~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
....+.+.+.++| +++|.++...
T Consensus 172 ~~~~~l~~~~~~L---~~gG~l~~~~ 194 (255)
T 3mb5_A 172 QPERVVEHAAKAL---KPGGFFVAYT 194 (255)
T ss_dssp CGGGGHHHHHHHE---EEEEEEEEEE
T ss_pred CHHHHHHHHHHHc---CCCCEEEEEE
Confidence 2456899999999 9999887654
No 356
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=96.39 E-value=0.0086 Score=63.70 Aligned_cols=80 Identities=16% Similarity=0.184 Sum_probs=61.1
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCC------------CC-CeeEE------e
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQ------------DK-SLKVF------N 597 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~------------d~-rl~vf------~ 597 (659)
....+||-||.|.|.+...+.+.+|+.+++++|+ |.+++.|++.+ ++.+ -+ ..|++ .
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~~~D~v~~~~vlh 279 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETIPDGADVYLIKHVLH 279 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCSSCSEEEEESCGG
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCCCCCceEEEhhhhhc
Confidence 4568999999999999999999999999999999 99999999875 2210 01 33443 1
Q ss_pred cccc---hhHHHHHHHhhccCCCCcEEEe
Q 006149 598 HLFC---LQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 598 ~l~~---~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
++-. ..+.+.++++| +|+|.+..
T Consensus 280 ~~~d~~~~~~L~~~~~~L---~pgG~l~i 305 (369)
T 3gwz_A 280 DWDDDDVVRILRRIATAM---KPDSRLLV 305 (369)
T ss_dssp GSCHHHHHHHHHHHHTTC---CTTCEEEE
T ss_pred cCCHHHHHHHHHHHHHHc---CCCCEEEE
Confidence 2222 25888899999 99997755
No 357
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=96.37 E-value=0.0085 Score=59.55 Aligned_cols=81 Identities=15% Similarity=0.119 Sum_probs=63.3
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCC--------------CCCCeeEE------ecc-
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT--------------QDKSLKVF------NHL- 599 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~--------------~d~rl~vf------~~l- 599 (659)
...+||-||.|.|.+...+....+. ++++||+++.+++.|++.+... ++...|+. .|+
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 122 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYIA 122 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGCS
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhhh
Confidence 5679999999999999999988765 8999999999999999987511 12233433 333
Q ss_pred cchhHHHHHHHhhccCCCCcEEEecC
Q 006149 600 FCLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 600 ~~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
....+.+.++++| +|+|.++...
T Consensus 123 ~~~~~l~~~~~~L---kpgG~l~~~~ 145 (253)
T 3g5l_A 123 SFDDICKKVYINL---KSSGSFIFSV 145 (253)
T ss_dssp CHHHHHHHHHHHE---EEEEEEEEEE
T ss_pred hHHHHHHHHHHHc---CCCcEEEEEe
Confidence 2467888999999 9999887753
No 358
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=96.36 E-value=0.0079 Score=59.04 Aligned_cols=80 Identities=15% Similarity=0.081 Sum_probs=62.2
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCC------------CCCCCeeEE------ecc-cc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF------------TQDKSLKVF------NHL-FC 601 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl------------~~d~rl~vf------~~l-~~ 601 (659)
.+.+||-||.|.|.+...+....+ ++++||+++.+++.|++.+.- ..+...|+. +|+ ..
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~ 119 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLPRRYDNIVLTHVLEHIDDP 119 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCCCSSCEEEEEEESCGGGCSSH
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcCcCCcccEEEEhhHHHhhcCH
Confidence 456899999999999999998875 799999999999999987641 123344543 344 24
Q ss_pred hhHHHHHH-HhhccCCCCcEEEecC
Q 006149 602 LQLEEDVN-LVLFGLSSESCIKDNS 625 (659)
Q Consensus 602 ~~f~~~~~-~~Lf~~~~~g~~~~n~ 625 (659)
..+.+.++ ++| +|+|.+....
T Consensus 120 ~~~l~~~~~~~L---kpgG~l~i~~ 141 (250)
T 2p7i_A 120 VALLKRINDDWL---AEGGRLFLVC 141 (250)
T ss_dssp HHHHHHHHHTTE---EEEEEEEEEE
T ss_pred HHHHHHHHHHhc---CCCCEEEEEc
Confidence 56888999 999 9999876644
No 359
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=96.32 E-value=0.0087 Score=60.78 Aligned_cols=81 Identities=11% Similarity=0.096 Sum_probs=60.5
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCCC------------CCeeEE------ecc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQD------------KSLKVF------NHL 599 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~d------------~rl~vf------~~l 599 (659)
...+||-||.|.|.+...+...++. ++++||+++.+++.|++.+ |+... ...|+. +|+
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~fD~v~~~~~l~~~ 142 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRIVSIGAFEHF 142 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSEEEEESCGGGT
T ss_pred CcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCeeEEEEeCchhhc
Confidence 4569999999999999999866554 9999999999999999875 22110 122322 344
Q ss_pred ---cchhHHHHHHHhhccCCCCcEEEecC
Q 006149 600 ---FCLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 600 ---~~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
....+.+.+.++| +|+|.++...
T Consensus 143 ~~~~~~~~l~~~~~~L---kpgG~l~~~~ 168 (287)
T 1kpg_A 143 GHERYDAFFSLAHRLL---PADGVMLLHT 168 (287)
T ss_dssp CTTTHHHHHHHHHHHS---CTTCEEEEEE
T ss_pred ChHHHHHHHHHHHHhc---CCCCEEEEEE
Confidence 2357889999999 9999887644
No 360
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=96.31 E-value=0.0083 Score=57.58 Aligned_cols=82 Identities=16% Similarity=0.166 Sum_probs=61.0
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCC---------------CCCCeeEE------ecc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT---------------QDKSLKVF------NHL 599 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~---------------~d~rl~vf------~~l 599 (659)
...+||-||.|.|.++..+....+. ++++||++|.+++.|++.+.-. ++...|+. .++
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~ 120 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDAL 120 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHHH
T ss_pred CCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhhh
Confidence 4568999999999999999988665 8999999999999999876320 11123332 111
Q ss_pred c----------------chhHHHHHHHhhccCCCCcEEEecCc
Q 006149 600 F----------------CLQLEEDVNLVLFGLSSESCIKDNSF 626 (659)
Q Consensus 600 ~----------------~~~f~~~~~~~Lf~~~~~g~~~~n~~ 626 (659)
. ...+.+.+.++| +++|.++...+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L---kpgG~li~~~~ 160 (215)
T 2pxx_A 121 LAGERDPWTVSSEGVHTVDQVLSEVSRVL---VPGGRFISMTS 160 (215)
T ss_dssp TTTCSCTTSCCHHHHHHHHHHHHHHHHHE---EEEEEEEEEES
T ss_pred ccccccccccccchhHHHHHHHHHHHHhC---cCCCEEEEEeC
Confidence 1 157788899999 99998877554
No 361
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=96.31 E-value=0.0079 Score=57.76 Aligned_cols=81 Identities=7% Similarity=0.023 Sum_probs=60.6
Q ss_pred CCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCC-------------CCCCeeEE-ec-c-cch
Q 006149 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFT-------------QDKSLKVF-NH-L-FCL 602 (659)
Q Consensus 542 ~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~-------------~d~rl~vf-~~-l-~~~ 602 (659)
..+||=||.|.|.+...+...+|..++++||++|.+++.|++.+ ++. .+...|+. .. + ...
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~~~~~ 145 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAFASLN 145 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEECSCSSSHH
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEEeccCCHH
Confidence 46999999999999999999999999999999999999998754 321 11223332 11 1 124
Q ss_pred hHHHHHHHhhccCCCCcEEEecC
Q 006149 603 QLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 603 ~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
.+.+.+.++| +|+|.+....
T Consensus 146 ~~l~~~~~~L---~~gG~l~~~~ 165 (207)
T 1jsx_A 146 DMVSWCHHLP---GEQGRFYALK 165 (207)
T ss_dssp HHHHHHTTSE---EEEEEEEEEE
T ss_pred HHHHHHHHhc---CCCcEEEEEe
Confidence 6777888888 9999876643
No 362
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=96.29 E-value=0.0062 Score=63.00 Aligned_cols=81 Identities=12% Similarity=0.091 Sum_probs=60.8
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCC------------CCCeeEE------ecc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQ------------DKSLKVF------NHL 599 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~------------d~rl~vf------~~l 599 (659)
...+||-||.|.|.+...+...+ +.++++||+++.+++.|++.+ |+.. +...|+. .|+
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~l~~~ 168 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIVSIEAFEHF 168 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEEEESCGGGT
T ss_pred CcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcCEEEEeChHHhc
Confidence 45699999999999999998876 459999999999999999875 3221 0122322 334
Q ss_pred ---cchhHHHHHHHhhccCCCCcEEEecC
Q 006149 600 ---FCLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 600 ---~~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
....+.+.+.++| +|+|.++...
T Consensus 169 ~~~~~~~~l~~~~~~L---kpgG~l~~~~ 194 (318)
T 2fk8_A 169 GHENYDDFFKRCFNIM---PADGRMTVQS 194 (318)
T ss_dssp CGGGHHHHHHHHHHHS---CTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHhc---CCCcEEEEEE
Confidence 2357888999999 9999887644
No 363
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=96.26 E-value=0.011 Score=56.83 Aligned_cols=80 Identities=16% Similarity=0.156 Sum_probs=60.9
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCC---------------CCCCeeEE------
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFT---------------QDKSLKVF------ 596 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~---------------~d~rl~vf------ 596 (659)
.+.+||-||.|.|.+...+... |..++++||+++.+++.|++.+ ++. ++...|+.
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l 121 (219)
T 3dlc_A 43 TAGTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSV 121 (219)
T ss_dssp CEEEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCG
T ss_pred CCCEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchH
Confidence 3449999999999999999998 7889999999999999999884 221 11223333
Q ss_pred ecc-cchhHHHHHHHhhccCCCCcEEEec
Q 006149 597 NHL-FCLQLEEDVNLVLFGLSSESCIKDN 624 (659)
Q Consensus 597 ~~l-~~~~f~~~~~~~Lf~~~~~g~~~~n 624 (659)
.|+ ....+.+.+.++| +|+|.+...
T Consensus 122 ~~~~~~~~~l~~~~~~L---~pgG~l~~~ 147 (219)
T 3dlc_A 122 FFWEDVATAFREIYRIL---KSGGKTYIG 147 (219)
T ss_dssp GGCSCHHHHHHHHHHHE---EEEEEEEEE
T ss_pred hhccCHHHHHHHHHHhC---CCCCEEEEE
Confidence 222 2367888999999 999987663
No 364
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=96.26 E-value=0.01 Score=62.75 Aligned_cols=80 Identities=11% Similarity=0.095 Sum_probs=60.4
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCC----------C---CCeeEE------e
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQ----------D---KSLKVF------N 597 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~----------d---~rl~vf------~ 597 (659)
....+||=||.|.|.+...+...+|+.+++++|+ |.+++.|++.+ ++.. + +.-|++ .
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vlh 267 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEADAVLFCRILY 267 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCCSEEEEESCGG
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCCCEEEEechhc
Confidence 4567999999999999999999999999999999 99999999764 2211 0 011333 1
Q ss_pred ccc---chhHHHHHHHhhccCCCCcEEEe
Q 006149 598 HLF---CLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 598 ~l~---~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
++- ...+.+.++++| +|+|.+..
T Consensus 268 ~~~d~~~~~~l~~~~~~L---~pgG~l~i 293 (359)
T 1x19_A 268 SANEQLSTIMCKKAFDAM---RSGGRLLI 293 (359)
T ss_dssp GSCHHHHHHHHHHHHTTC---CTTCEEEE
T ss_pred cCCHHHHHHHHHHHHHhc---CCCCEEEE
Confidence 222 356788899999 99997743
No 365
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=96.26 E-value=0.011 Score=60.17 Aligned_cols=81 Identities=19% Similarity=0.195 Sum_probs=63.0
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCC-ccEEEEecChhHHHHHHhhcCCC---------------CCCCeeEE------e
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPF-VGIEAVELDLTMLNLAEDYFGFT---------------QDKSLKVF------N 597 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~-~~i~~VEiDp~V~~vA~~~Fgl~---------------~d~rl~vf------~ 597 (659)
..+.+||-||.|.|.++..+...+|. .++++||++|.+++.|++.+... .+...|+. .
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~ 100 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELNDKYDIAICHAFLL 100 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCSSCEEEEEEESCGG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcCCCeeEEEECChhh
Confidence 45689999999999999999999984 89999999999999999875321 11233433 2
Q ss_pred cc-cchhHHHHHHHhhccCCCCcEEEe
Q 006149 598 HL-FCLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 598 ~l-~~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
++ ....+.+.++++| +|+|.+..
T Consensus 101 ~~~~~~~~l~~~~~~L---kpgG~l~~ 124 (284)
T 3gu3_A 101 HMTTPETMLQKMIHSV---KKGGKIIC 124 (284)
T ss_dssp GCSSHHHHHHHHHHTE---EEEEEEEE
T ss_pred cCCCHHHHHHHHHHHc---CCCCEEEE
Confidence 22 2367888999999 99998874
No 366
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=96.25 E-value=0.008 Score=59.16 Aligned_cols=82 Identities=16% Similarity=0.197 Sum_probs=62.4
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCC-----------------CCCCeeEEe---
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFT-----------------QDKSLKVFN--- 597 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~-----------------~d~rl~vf~--- 597 (659)
...+||=||-|.|.+...+...+|+.++++||+++.+++.|++.. |+. ++..+|...
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 446899999999999999999999999999999999999998774 332 111222220
Q ss_pred ------------cccchhHHHHHHHhhccCCCCcEEEecC
Q 006149 598 ------------HLFCLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 598 ------------~l~~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
.+...+|.+.+.++| +|+|++..-+
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~L---kpGG~l~i~t 150 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKL---QLGGVFHMAT 150 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHE---EEEEEEEEEE
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHc---CCCcEEEEEe
Confidence 022236999999999 9999886644
No 367
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=96.24 E-value=0.016 Score=57.50 Aligned_cols=79 Identities=11% Similarity=0.028 Sum_probs=60.1
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCC--------------CCCeeEE------e
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQ--------------DKSLKVF------N 597 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~--------------d~rl~vf------~ 597 (659)
...+||-||.|.|.+...+...+ ..++++||++|.+++.|++.+ |+.. +...|+. .
T Consensus 36 ~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~V~~~~~~~ 114 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANEKCDVAACVGATW 114 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcCCCCCEEEECCChH
Confidence 44699999999999999999887 468999999999999998765 3321 2233433 1
Q ss_pred cc-cchhHHHHHHHhhccCCCCcEEEe
Q 006149 598 HL-FCLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 598 ~l-~~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
++ ....+.+.++++| +|+|.++.
T Consensus 115 ~~~~~~~~l~~~~r~L---kpgG~l~~ 138 (256)
T 1nkv_A 115 IAGGFAGAEELLAQSL---KPGGIMLI 138 (256)
T ss_dssp GTSSSHHHHHHHTTSE---EEEEEEEE
T ss_pred hcCCHHHHHHHHHHHc---CCCeEEEE
Confidence 22 2467788999999 99997766
No 368
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=96.21 E-value=0.0099 Score=57.33 Aligned_cols=80 Identities=13% Similarity=0.074 Sum_probs=61.9
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCC----------CCCCeeEE------eccc---c
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT----------QDKSLKVF------NHLF---C 601 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~----------~d~rl~vf------~~l~---~ 601 (659)
...+||-||.|.|.+...+... +.++++||+++.+++.|++.++.. .+...|+. .|+. .
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~~~ 120 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRLGRPVRTMLFHQLDAIDAYDAVWAHACLLHVPRDEL 120 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTSCCEECCGGGCCCCSCEEEEEECSCGGGSCHHHH
T ss_pred CCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhcCCceEEeeeccCCCCCcEEEEEecCchhhcCHHHH
Confidence 4579999999999999999987 468999999999999999876432 23344543 3332 3
Q ss_pred hhHHHHHHHhhccCCCCcEEEecC
Q 006149 602 LQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 602 ~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
..+.+.+.++| +++|.++...
T Consensus 121 ~~~l~~~~~~L---kpgG~l~~~~ 141 (211)
T 3e23_A 121 ADVLKLIWRAL---KPGGLFYASY 141 (211)
T ss_dssp HHHHHHHHHHE---EEEEEEEEEE
T ss_pred HHHHHHHHHhc---CCCcEEEEEE
Confidence 46788999999 9999887754
No 369
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=96.21 E-value=0.009 Score=60.34 Aligned_cols=47 Identities=17% Similarity=0.232 Sum_probs=43.2
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCC
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF 587 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl 587 (659)
...+||=||.|.|.++..+...+|..+|++|||||.++++|++.+..
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~ 82 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLEL 82 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTS
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHh
Confidence 45689999999999999999999989999999999999999988654
No 370
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=96.17 E-value=0.0099 Score=57.51 Aligned_cols=84 Identities=14% Similarity=0.061 Sum_probs=59.6
Q ss_pred CCCeEEEEccCcchHHHHHHhhC-CCccEEEEecChhHHHHHHhhc---CCCC--------------CCCeeEE-ecccc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYF---GFTQ--------------DKSLKVF-NHLFC 601 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~-p~~~i~~VEiDp~V~~vA~~~F---gl~~--------------d~rl~vf-~~l~~ 601 (659)
...+||.||.|.|.+...+.+.. |..++++||++|.+++.|++.+ ++.. +...|+. .....
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~ 156 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTAAG 156 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESSBB
T ss_pred CCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECCch
Confidence 44699999999999999998877 6679999999999999999875 3221 1122332 11111
Q ss_pred hhHHHHHHHhhccCCCCcEEEecCch
Q 006149 602 LQLEEDVNLVLFGLSSESCIKDNSFP 627 (659)
Q Consensus 602 ~~f~~~~~~~Lf~~~~~g~~~~n~~~ 627 (659)
..+.+.+.++| +++|.++....+
T Consensus 157 ~~~~~~~~~~L---~pgG~lv~~~~~ 179 (215)
T 2yxe_A 157 PKIPEPLIRQL---KDGGKLLMPVGR 179 (215)
T ss_dssp SSCCHHHHHTE---EEEEEEEEEESS
T ss_pred HHHHHHHHHHc---CCCcEEEEEECC
Confidence 22336788889 999988776543
No 371
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=96.17 E-value=0.027 Score=55.86 Aligned_cols=82 Identities=18% Similarity=0.183 Sum_probs=61.8
Q ss_pred CCCeEEEEccCcchHHHHHHhh-CCCccEEEEecChhHHHHHHhhc----CCCC--------------CCCeeEE-eccc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHEC-MPFVGIEAVELDLTMLNLAEDYF----GFTQ--------------DKSLKVF-NHLF 600 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~-~p~~~i~~VEiDp~V~~vA~~~F----gl~~--------------d~rl~vf-~~l~ 600 (659)
...+||.+|.|.|.+...+.+. .|..++++||++|.+++.|++.+ |... +...|+. .++-
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~~~~ 175 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVALDLM 175 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEEESS
T ss_pred CCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEECCc
Confidence 4469999999999999999988 67789999999999999999886 5210 0112222 2222
Q ss_pred -chhHHHHHHHhhccCCCCcEEEecC
Q 006149 601 -CLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 601 -~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
...+.+.+.++| +++|.++...
T Consensus 176 ~~~~~l~~~~~~L---~~gG~l~~~~ 198 (258)
T 2pwy_A 176 EPWKVLEKAALAL---KPDRFLVAYL 198 (258)
T ss_dssp CGGGGHHHHHHHE---EEEEEEEEEE
T ss_pred CHHHHHHHHHHhC---CCCCEEEEEe
Confidence 348889999999 9999877644
No 372
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=96.16 E-value=0.023 Score=57.92 Aligned_cols=82 Identities=13% Similarity=0.054 Sum_probs=62.0
Q ss_pred CCCeEEEEccCc---chHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCCC-------C-------------------C
Q 006149 541 KSVKAVVIGLGA---GLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ-------D-------------------K 591 (659)
Q Consensus 541 ~~~~vLiiGlGg---G~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~~-------d-------------------~ 591 (659)
...+||-||.|. |.+...+.+.+|+.+|++||+||.|++.|++.+.-.. | +
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 347999999999 9998888888999999999999999999998773210 0 1
Q ss_pred CeeEE------eccc---chhHHHHHHHhhccCCCCcEEEecC
Q 006149 592 SLKVF------NHLF---CLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 592 rl~vf------~~l~---~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
+.+++ .|+- ...+...+.++| +|+|.++...
T Consensus 157 ~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L---~pGG~l~i~~ 196 (274)
T 2qe6_A 157 RPAAIMLVGMLHYLSPDVVDRVVGAYRDAL---APGSYLFMTS 196 (274)
T ss_dssp SCCEEEETTTGGGSCTTTHHHHHHHHHHHS---CTTCEEEEEE
T ss_pred CCEEEEEechhhhCCcHHHHHHHHHHHHhC---CCCcEEEEEE
Confidence 22222 2332 256788899999 9999887644
No 373
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=96.15 E-value=0.021 Score=60.08 Aligned_cols=116 Identities=11% Similarity=0.165 Sum_probs=81.6
Q ss_pred HHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcC-------------------
Q 006149 55 DPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRD------------------- 114 (659)
Q Consensus 55 ~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~------------------- 114 (659)
..+.+++.. .+...|+.+|||.......|... +...++-||+ +.+++.=++.....
T Consensus 87 ~~v~~fl~~---~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~ 162 (334)
T 1rjd_A 87 AAILEFLVA---NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPF 162 (334)
T ss_dssp HHHHHHHHH---CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTE
T ss_pred HHHHHHHHH---CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhccccccccccccc
Confidence 345555542 35689999999999999888764 3347788888 66665333333222
Q ss_pred ---CCCcEEEEeecCCCCC---------CCCcccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 115 ---RSDMRWRVMDMTSMQF---------MDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 115 ---~~~i~~~~~D~~~l~~---------~~~sFDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
..+.+++.+|+.+... ..+...++++.+++.++.... ..++++.+.... |+|.+++.+..
T Consensus 163 ~~~~~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~-----~~~ll~~ia~~~-~~~~~v~~e~i 234 (334)
T 1rjd_A 163 LIDQGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNE-----SQLLINTIMSKF-SHGLWISYDPI 234 (334)
T ss_dssp EEECSSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHH-----HHHHHHHHHHHC-SSEEEEEEEEC
T ss_pred ccCCCceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHH-----HHHHHHHHHhhC-CCcEEEEEecc
Confidence 2578899999988421 235678999999999987554 678888888877 78888766654
No 374
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=96.15 E-value=0.013 Score=58.53 Aligned_cols=79 Identities=14% Similarity=0.233 Sum_probs=60.4
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCC--------------CCCCeeEE------
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFT--------------QDKSLKVF------ 596 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~--------------~d~rl~vf------ 596 (659)
....+||-||.|.|.+...+....+ ++++||++|.+++.|++.+ |++ ++...|+.
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~l 113 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIAA 113 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESCG
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhhh
Confidence 3457999999999999999998875 8999999999999999874 221 12234443
Q ss_pred ecc-cchhHHHHHHHhhccCCCCcEEEe
Q 006149 597 NHL-FCLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 597 ~~l-~~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
.|+ ....+...++++| +|+|.+..
T Consensus 114 ~~~~d~~~~l~~~~r~L---kpgG~l~~ 138 (260)
T 1vl5_A 114 HHFPNPASFVSEAYRVL---KKGGQLLL 138 (260)
T ss_dssp GGCSCHHHHHHHHHHHE---EEEEEEEE
T ss_pred HhcCCHHHHHHHHHHHc---CCCCEEEE
Confidence 222 1357889999999 99997765
No 375
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=96.11 E-value=0.012 Score=60.25 Aligned_cols=81 Identities=19% Similarity=0.219 Sum_probs=63.0
Q ss_pred CCCCeEEEEccCcchHHHHHHhhC-CCccEEEEecChhHHHHHHhhcCC----C---------------CC------CCe
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFGF----T---------------QD------KSL 593 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~-p~~~i~~VEiDp~V~~vA~~~Fgl----~---------------~d------~rl 593 (659)
....+||=||.|.|.+...+...+ +..++++||++|.+++.|++.+.. . .+ ...
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 356799999999999999999887 888999999999999999986411 0 01 233
Q ss_pred eEE------ecccchhHHHHHHHhhccCCCCcEEEe
Q 006149 594 KVF------NHLFCLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 594 ~vf------~~l~~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
|+. .|+.-..+++.++++| +|+|.++.
T Consensus 115 D~V~~~~~l~~~~~~~~l~~~~~~L---kpgG~l~i 147 (299)
T 3g5t_A 115 DMITAVECAHWFDFEKFQRSAYANL---RKDGTIAI 147 (299)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHE---EEEEEEEE
T ss_pred eEEeHhhHHHHhCHHHHHHHHHHhc---CCCcEEEE
Confidence 333 2334467899999999 99998876
No 376
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=96.10 E-value=0.014 Score=58.42 Aligned_cols=81 Identities=17% Similarity=0.217 Sum_probs=61.3
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC-----------CCCCCCeeEE-------eccc-
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG-----------FTQDKSLKVF-------NHLF- 600 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg-----------l~~d~rl~vf-------~~l~- 600 (659)
+.+.+||-||.|.|.+...|.... .++++||++|.+++.|++.+. ++.+...|+. .|+.
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~~~ 126 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSLGRRFSAVTCMFSSIGHLAG 126 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCCSCCEEEEEECTTGGGGSCH
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCccCCcCEEEEcCchhhhcCC
Confidence 345799999999999999999885 479999999999999998753 1112334433 2331
Q ss_pred ---chhHHHHHHHhhccCCCCcEEEecC
Q 006149 601 ---CLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 601 ---~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
...+.+.++++| +|+|.++...
T Consensus 127 ~~~~~~~l~~~~~~L---~pgG~l~i~~ 151 (263)
T 3pfg_A 127 QAELDAALERFAAHV---LPDGVVVVEP 151 (263)
T ss_dssp HHHHHHHHHHHHHTE---EEEEEEEECC
T ss_pred HHHHHHHHHHHHHhc---CCCcEEEEEe
Confidence 235678899999 9999998864
No 377
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=96.08 E-value=0.0066 Score=60.06 Aligned_cols=79 Identities=22% Similarity=0.239 Sum_probs=60.0
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCC-----------------CCCCeeEE------e
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-----------------QDKSLKVF------N 597 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~-----------------~d~rl~vf------~ 597 (659)
.+.+||-||.|.|.+...|.... ..++++||+++.+++.|++.+.-. ++...|+. .
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 46799999999999999988776 459999999999999999876321 11234433 2
Q ss_pred ccc---chhHHHHHHHhhccCCCCcEEEe
Q 006149 598 HLF---CLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 598 ~l~---~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
|+- ...+.+.+.++| +++|.++.
T Consensus 158 ~~~~~~~~~~l~~~~~~L---kpgG~l~i 183 (241)
T 2ex4_A 158 HLTDQHLAEFLRRCKGSL---RPNGIIVI 183 (241)
T ss_dssp GSCHHHHHHHHHHHHHHE---EEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHhc---CCCeEEEE
Confidence 232 126888999999 99997766
No 378
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=96.08 E-value=0.0095 Score=57.86 Aligned_cols=80 Identities=19% Similarity=0.202 Sum_probs=60.3
Q ss_pred CCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCC---------------C-CCCCeeEE--ec---cc
Q 006149 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF---------------T-QDKSLKVF--NH---LF 600 (659)
Q Consensus 542 ~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl---------------~-~d~rl~vf--~~---l~ 600 (659)
..+||-||.|.|.+...+....+ ++++||++|.+++.|++.+.. + ++...|+. .. +.
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~ 116 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHF 116 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGC
T ss_pred CCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHhC
Confidence 57999999999999999999876 899999999999999987511 1 11234433 11 11
Q ss_pred ----chhHHHHHHHhhccCCCCcEEEecCc
Q 006149 601 ----CLQLEEDVNLVLFGLSSESCIKDNSF 626 (659)
Q Consensus 601 ----~~~f~~~~~~~Lf~~~~~g~~~~n~~ 626 (659)
...+.+.++++| +++|.++....
T Consensus 117 ~~~~~~~~l~~~~~~L---~~gG~l~~~~~ 143 (227)
T 1ve3_A 117 EPLELNQVFKEVRRVL---KPSGKFIMYFT 143 (227)
T ss_dssp CHHHHHHHHHHHHHHE---EEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHc---CCCcEEEEEec
Confidence 246788899999 99998876543
No 379
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=96.08 E-value=0.02 Score=60.96 Aligned_cols=74 Identities=14% Similarity=0.113 Sum_probs=56.1
Q ss_pred CCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCC--------------C--CCCeeEE--eccc
Q 006149 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFT--------------Q--DKSLKVF--NHLF 600 (659)
Q Consensus 542 ~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~--------------~--d~rl~vf--~~l~ 600 (659)
..+||-|| |.|.+...+....|..+|++|||||.++++|++.+ |+. . +...|+. +..+
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~ 251 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPPE 251 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCCS
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCCC
Confidence 57999999 99999999998888779999999999999999885 431 0 1122322 1111
Q ss_pred ----chhHHHHHHHhhccCCCCc
Q 006149 601 ----CLQLEEDVNLVLFGLSSES 619 (659)
Q Consensus 601 ----~~~f~~~~~~~Lf~~~~~g 619 (659)
...|++.+.++| +|+|
T Consensus 252 ~~~~~~~~l~~~~~~L---kpgG 271 (373)
T 2qm3_A 252 TLEAIRAFVGRGIATL---KGPR 271 (373)
T ss_dssp SHHHHHHHHHHHHHTB---CSTT
T ss_pred chHHHHHHHHHHHHHc---ccCC
Confidence 146788899999 9999
No 380
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=96.04 E-value=0.015 Score=55.62 Aligned_cols=79 Identities=14% Similarity=0.055 Sum_probs=61.0
Q ss_pred CCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCC------------CCCCeeEE------ecc---c
Q 006149 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT------------QDKSLKVF------NHL---F 600 (659)
Q Consensus 542 ~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~------------~d~rl~vf------~~l---~ 600 (659)
..+||-||.|.|.+...|... +.++++||+++.+++.|++.+.-. ++...|+. .|+ .
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~ 119 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGE 119 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTT
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHH
Confidence 579999999999999999887 458999999999999999874211 12334433 344 3
Q ss_pred chhHHHHHHHhhccCCCCcEEEecC
Q 006149 601 CLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 601 ~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
...+.+.+.++| +|+|.+....
T Consensus 120 ~~~~l~~~~~~L---~pgG~l~i~~ 141 (203)
T 3h2b_A 120 LPDALVALRMAV---EDGGGLLMSF 141 (203)
T ss_dssp HHHHHHHHHHTE---EEEEEEEEEE
T ss_pred HHHHHHHHHHHc---CCCcEEEEEE
Confidence 467888999999 9999887644
No 381
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=96.04 E-value=0.011 Score=59.40 Aligned_cols=81 Identities=16% Similarity=0.195 Sum_probs=61.4
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCC---------------CCCCeeEE-----
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFT---------------QDKSLKVF----- 596 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~---------------~d~rl~vf----- 596 (659)
....+||-||.|.|.+...+.+.+ ..++++||+++.+++.|++.+ |+. ++...|+.
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 138 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALES 138 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEech
Confidence 345799999999999999998876 569999999999999998875 221 12233433
Q ss_pred -ecc-cchhHHHHHHHhhccCCCCcEEEec
Q 006149 597 -NHL-FCLQLEEDVNLVLFGLSSESCIKDN 624 (659)
Q Consensus 597 -~~l-~~~~f~~~~~~~Lf~~~~~g~~~~n 624 (659)
.|+ ....+.+.++++| +|+|.++..
T Consensus 139 l~~~~~~~~~l~~~~~~L---~pgG~l~i~ 165 (273)
T 3bus_A 139 LHHMPDRGRALREMARVL---RPGGTVAIA 165 (273)
T ss_dssp TTTSSCHHHHHHHHHTTE---EEEEEEEEE
T ss_pred hhhCCCHHHHHHHHHHHc---CCCeEEEEE
Confidence 333 2467888999999 999977653
No 382
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=96.04 E-value=0.03 Score=55.26 Aligned_cols=75 Identities=13% Similarity=0.242 Sum_probs=58.5
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCCCCCCe----------------------eEE--
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSL----------------------KVF-- 596 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~~d~rl----------------------~vf-- 596 (659)
...+||-||.|.|.+...|....+ ++++||++|.+++.|++.+... ++ ++.
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~d~v~~ 130 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENTAA---NISYRLLDGLVPEQAAQIHSEIGDANIYM 130 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSCCT---TEEEEECCTTCHHHHHHHHHHHCSCEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCccc---CceEEECcccccccccccccccCccEEEE
Confidence 446899999999999999999887 8999999999999999987422 22 122
Q ss_pred ----eccc---chhHHHHHHHhhccCCCCcEEEe
Q 006149 597 ----NHLF---CLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 597 ----~~l~---~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
.++- ...+.+.+.++| +|+|.+..
T Consensus 131 ~~~~~~~~~~~~~~~l~~~~~~L---kpgG~l~i 161 (245)
T 3ggd_A 131 RTGFHHIPVEKRELLGQSLRILL---GKQGAMYL 161 (245)
T ss_dssp ESSSTTSCGGGHHHHHHHHHHHH---TTTCEEEE
T ss_pred cchhhcCCHHHHHHHHHHHHHHc---CCCCEEEE
Confidence 1222 247888999999 99997544
No 383
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=96.03 E-value=0.023 Score=56.42 Aligned_cols=80 Identities=16% Similarity=0.196 Sum_probs=59.5
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC---------------CC-CCCCeeEE------e
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG---------------FT-QDKSLKVF------N 597 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg---------------l~-~d~rl~vf------~ 597 (659)
....+||-||.|.|.+...+... ..++++||+++.+++.|++.+. ++ ++...|+. .
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 115 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWH 115 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGG
T ss_pred CCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchh
Confidence 34579999999999999999887 4689999999999999998861 00 11123332 2
Q ss_pred cc-cchhHHHHHHHhhccCCCCcEEEec
Q 006149 598 HL-FCLQLEEDVNLVLFGLSSESCIKDN 624 (659)
Q Consensus 598 ~l-~~~~f~~~~~~~Lf~~~~~g~~~~n 624 (659)
++ ....+.+.+.++| +|+|.++..
T Consensus 116 ~~~~~~~~l~~~~~~L---~pgG~l~~~ 140 (263)
T 2yqz_A 116 LVPDWPKVLAEAIRVL---KPGGALLEG 140 (263)
T ss_dssp GCTTHHHHHHHHHHHE---EEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHC---CCCcEEEEE
Confidence 22 2367888999999 999987664
No 384
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=96.02 E-value=0.023 Score=59.53 Aligned_cols=78 Identities=9% Similarity=0.024 Sum_probs=60.3
Q ss_pred CCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCC----------------CCCCeeEE------
Q 006149 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFT----------------QDKSLKVF------ 596 (659)
Q Consensus 542 ~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~----------------~d~rl~vf------ 596 (659)
+.+||=||.|.|.+...+.+.+|..+++++|+ |.+++.|++.+ ++. .....|++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vl 258 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCL 258 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEeccc
Confidence 68999999999999999999999999999999 99999998864 211 11124544
Q ss_pred eccc---chhHHHHHHHhhccCCCCcEEEe
Q 006149 597 NHLF---CLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 597 ~~l~---~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
.++- ...+.+.++++| +|+|.+..
T Consensus 259 h~~~~~~~~~~l~~~~~~L---~pgG~l~i 285 (352)
T 3mcz_A 259 HYFDAREAREVIGHAAGLV---KPGGALLI 285 (352)
T ss_dssp GGSCHHHHHHHHHHHHHTE---EEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHHc---CCCCEEEE
Confidence 1221 157888899999 99997655
No 385
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=96.02 E-value=0.014 Score=57.71 Aligned_cols=80 Identities=15% Similarity=0.124 Sum_probs=60.1
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCC---------------CCCCeeEE------ec
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT---------------QDKSLKVF------NH 598 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~---------------~d~rl~vf------~~ 598 (659)
..+.+||-||.|.|.+...+.... ..++++||+++.+++.|++.+.-. ++...|+. .|
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 170 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAIY 170 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGGG
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcchhhh
Confidence 346799999999999999888776 457999999999999999886421 12233433 23
Q ss_pred cc---chhHHHHHHHhhccCCCCcEEEe
Q 006149 599 LF---CLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 599 l~---~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
+. ...+.+.+.++| +|+|.++.
T Consensus 171 ~~~~~~~~~l~~~~~~L---kpgG~l~i 195 (254)
T 1xtp_A 171 LTDADFVKFFKHCQQAL---TPNGYIFF 195 (254)
T ss_dssp SCHHHHHHHHHHHHHHE---EEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhc---CCCeEEEE
Confidence 31 356788899999 99997765
No 386
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=95.99 E-value=0.026 Score=56.43 Aligned_cols=81 Identities=15% Similarity=0.158 Sum_probs=61.1
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC----------CC-CCCCeeEE------eccc--c
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG----------FT-QDKSLKVF------NHLF--C 601 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg----------l~-~d~rl~vf------~~l~--~ 601 (659)
.+.+||-||.|.|.+...+... ..++++||+++.+++.|++... ++ ++...|+. .|+. .
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~ 131 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVENK 131 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHCSCH
T ss_pred CCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhhccccH
Confidence 4579999999999999999887 3589999999999999998753 11 12344543 1221 3
Q ss_pred hhHHHHHHHhhccCCCCcEEEecCc
Q 006149 602 LQLEEDVNLVLFGLSSESCIKDNSF 626 (659)
Q Consensus 602 ~~f~~~~~~~Lf~~~~~g~~~~n~~ 626 (659)
..+.+.+.++| +|+|.++...+
T Consensus 132 ~~~l~~~~~~L---kpgG~l~~~~~ 153 (260)
T 2avn_A 132 DKAFSEIRRVL---VPDGLLIATVD 153 (260)
T ss_dssp HHHHHHHHHHE---EEEEEEEEEEE
T ss_pred HHHHHHHHHHc---CCCeEEEEEeC
Confidence 56778899999 99998877553
No 387
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=95.99 E-value=0.019 Score=58.31 Aligned_cols=82 Identities=13% Similarity=0.131 Sum_probs=62.2
Q ss_pred CCCeEEEEccCcchHHHHHHhh-CCCccEEEEecChhHHHHHHhhc----CCCC-------------CCCeeEE-ecc-c
Q 006149 541 KSVKAVVIGLGAGLLPMFLHEC-MPFVGIEAVELDLTMLNLAEDYF----GFTQ-------------DKSLKVF-NHL-F 600 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~-~p~~~i~~VEiDp~V~~vA~~~F----gl~~-------------d~rl~vf-~~l-~ 600 (659)
...+||-+|.|.|.+...+... .|..++++||++|.+++.|++.+ |... +...|+. .++ .
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~fD~Vi~~~~~ 189 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQMYDAVIADIPD 189 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSCCEEEEEECCSC
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcCCCccEEEEcCcC
Confidence 4469999999999999999987 78889999999999999999876 4210 0112222 222 2
Q ss_pred chhHHHHHHHhhccCCCCcEEEecC
Q 006149 601 CLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 601 ~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
...+.+.+.++| +++|.+...+
T Consensus 190 ~~~~l~~~~~~L---kpgG~l~i~~ 211 (275)
T 1yb2_A 190 PWNHVQKIASMM---KPGSVATFYL 211 (275)
T ss_dssp GGGSHHHHHHTE---EEEEEEEEEE
T ss_pred HHHHHHHHHHHc---CCCCEEEEEe
Confidence 357889999999 9999887655
No 388
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=95.97 E-value=0.014 Score=57.63 Aligned_cols=81 Identities=14% Similarity=0.169 Sum_probs=57.8
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCC------C--------CCeeEE-ecccch
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQ------D--------KSLKVF-NHLFCL 602 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~------d--------~rl~vf-~~l~~~ 602 (659)
...+||.||.|.|.+...+.+..+ .++++||++|.+++.|++.+ |+.. | ...|+. ......
T Consensus 91 ~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Ii~~~~~~ 169 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYDVIIVTAGAP 169 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSBBS
T ss_pred CCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCCCCccEEEECCcHH
Confidence 346899999999999999999887 79999999999999999875 3321 1 112322 111112
Q ss_pred hHHHHHHHhhccCCCCcEEEecC
Q 006149 603 QLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 603 ~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
.+.+.+.+.| +++|.++..+
T Consensus 170 ~~~~~~~~~L---~pgG~lvi~~ 189 (235)
T 1jg1_A 170 KIPEPLIEQL---KIGGKLIIPV 189 (235)
T ss_dssp SCCHHHHHTE---EEEEEEEEEE
T ss_pred HHHHHHHHhc---CCCcEEEEEE
Confidence 2345778888 9999887755
No 389
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=95.94 E-value=0.021 Score=55.44 Aligned_cols=80 Identities=16% Similarity=0.155 Sum_probs=60.2
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCCC----------------------CCCeeEE-
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ----------------------DKSLKVF- 596 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~~----------------------d~rl~vf- 596 (659)
+...+||-||.|.|.+...+... +.++++||+++.+++.|++.+.-.. +...|+.
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 34579999999999999999887 4699999999999999998653211 1223332
Q ss_pred -----ecccc-h---hHHHHHHHhhccCCCCcEEEec
Q 006149 597 -----NHLFC-L---QLEEDVNLVLFGLSSESCIKDN 624 (659)
Q Consensus 597 -----~~l~~-~---~f~~~~~~~Lf~~~~~g~~~~n 624 (659)
.++.. . .+.+.+.++| +++|.+...
T Consensus 107 ~~~~l~~~~~~~~~~~~l~~~~~~L---~pgG~l~~~ 140 (235)
T 3sm3_A 107 MQAFLTSVPDPKERSRIIKEVFRVL---KPGAYLYLV 140 (235)
T ss_dssp EESCGGGCCCHHHHHHHHHHHHHHE---EEEEEEEEE
T ss_pred EcchhhcCCCHHHHHHHHHHHHHHc---CCCeEEEEE
Confidence 23322 2 6889999999 999988764
No 390
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=95.92 E-value=0.021 Score=57.70 Aligned_cols=80 Identities=16% Similarity=0.142 Sum_probs=60.7
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC-----------CCCCCCeeEE------ecc-cch
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG-----------FTQDKSLKVF------NHL-FCL 602 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg-----------l~~d~rl~vf------~~l-~~~ 602 (659)
...+||-||.|.|.+...+.. +..++++||++|.+++.|++.+. ++.+...|+. .++ ...
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~d~~ 134 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRVDKPLDAVFSNAMLHWVKEPE 134 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCCSSCEEEEEEESCGGGCSCHH
T ss_pred CCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCcCCCcCEEEEcchhhhCcCHH
Confidence 457999999999999999988 67899999999999999998741 1112234433 222 234
Q ss_pred hHHHHHHHhhccCCCCcEEEecC
Q 006149 603 QLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 603 ~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
.+...++++| +|+|.++...
T Consensus 135 ~~l~~~~~~L---kpgG~l~~~~ 154 (279)
T 3ccf_A 135 AAIASIHQAL---KSGGRFVAEF 154 (279)
T ss_dssp HHHHHHHHHE---EEEEEEEEEE
T ss_pred HHHHHHHHhc---CCCcEEEEEe
Confidence 6888999999 9999887643
No 391
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=95.92 E-value=0.037 Score=53.34 Aligned_cols=81 Identities=16% Similarity=0.136 Sum_probs=60.7
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCC---------------CCCCCeeEE------ec
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF---------------TQDKSLKVF------NH 598 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl---------------~~d~rl~vf------~~ 598 (659)
..+.+||-||.|.|.+...+... +.++++||+++.+++.|++.-.. ..+...|+. .+
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~~ 128 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALLH 128 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCCS
T ss_pred CCCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhhh
Confidence 34589999999999999999887 46899999999999999987211 112224433 11
Q ss_pred ccchhHHHHHHHhhccCCCCcEEEecC
Q 006149 599 LFCLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 599 l~~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
-....+.+.++++| +|+|.++...
T Consensus 129 ~~~~~~l~~~~~~L---~pgG~l~~~~ 152 (227)
T 3e8s_A 129 QDIIELLSAMRTLL---VPGGALVIQT 152 (227)
T ss_dssp SCCHHHHHHHHHTE---EEEEEEEEEE
T ss_pred hhHHHHHHHHHHHh---CCCeEEEEEe
Confidence 12357889999999 9999887744
No 392
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=95.90 E-value=0.033 Score=53.78 Aligned_cols=45 Identities=13% Similarity=-0.057 Sum_probs=39.5
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG 586 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg 586 (659)
+...+||.+|-|.|.+..+|.+. +.+|++||+++.+++.|++-.+
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~ 65 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERG 65 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHC
T ss_pred CCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHcc
Confidence 34579999999999999999987 3589999999999999998754
No 393
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=95.90 E-value=0.022 Score=55.66 Aligned_cols=81 Identities=12% Similarity=0.094 Sum_probs=61.0
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC-----------CCCCCCeeEE-------ecccc
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG-----------FTQDKSLKVF-------NHLFC 601 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg-----------l~~d~rl~vf-------~~l~~ 601 (659)
+.+.+||-||.|.|.+...+...++ ++++||++|.+++.|++.+. ++.+...|+. .|+..
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~~~~ 116 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRLGRKFSAVVSMFSSVGYLKT 116 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCCSSCEEEEEECTTGGGGCCS
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcccCCCCcEEEEcCchHhhcCC
Confidence 3457999999999999999998875 89999999999999998752 1112234433 22322
Q ss_pred ----hhHHHHHHHhhccCCCCcEEEecC
Q 006149 602 ----LQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 602 ----~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
..+.+.++++| +|+|.++...
T Consensus 117 ~~~~~~~l~~~~~~L---~pgG~l~~~~ 141 (239)
T 3bxo_A 117 TEELGAAVASFAEHL---EPGGVVVVEP 141 (239)
T ss_dssp HHHHHHHHHHHHHTE---EEEEEEEECC
T ss_pred HHHHHHHHHHHHHhc---CCCeEEEEEe
Confidence 46778889999 9999888864
No 394
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=95.90 E-value=0.019 Score=56.28 Aligned_cols=81 Identities=14% Similarity=0.104 Sum_probs=61.0
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCC--------------CCCCeeEE------ecc
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT--------------QDKSLKVF------NHL 599 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~--------------~d~rl~vf------~~l 599 (659)
+...+||-||.|.|.+...+... +.++++||++|.+++.|++..... ++...|+. .|+
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 129 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWT 129 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhc
Confidence 34579999999999999999987 468999999999999999874211 12233433 333
Q ss_pred c-chhHHHHHHHhhccCCCCcEEEecC
Q 006149 600 F-CLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 600 ~-~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
- ...+.+.+.++| +|+|.+....
T Consensus 130 ~~~~~~l~~~~~~L---~pgG~l~i~~ 153 (242)
T 3l8d_A 130 EEPLRALNEIKRVL---KSDGYACIAI 153 (242)
T ss_dssp SCHHHHHHHHHHHE---EEEEEEEEEE
T ss_pred cCHHHHHHHHHHHh---CCCeEEEEEE
Confidence 2 347889999999 9999877644
No 395
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=95.89 E-value=0.013 Score=57.60 Aligned_cols=78 Identities=13% Similarity=0.168 Sum_probs=59.1
Q ss_pred CCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCC-----------------CCCCeeEE------ec
Q 006149 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-----------------QDKSLKVF------NH 598 (659)
Q Consensus 542 ~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~-----------------~d~rl~vf------~~ 598 (659)
+.+||-||.|.|.+...+.. +..++++||++|.+++.|++.+.-. .+...|+. .+
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCA 144 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTT
T ss_pred CCCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhc
Confidence 45999999999999999976 4678999999999999999887421 12233433 22
Q ss_pred c---cchhHHHHHHHhhccCCCCcEEEec
Q 006149 599 L---FCLQLEEDVNLVLFGLSSESCIKDN 624 (659)
Q Consensus 599 l---~~~~f~~~~~~~Lf~~~~~g~~~~n 624 (659)
+ ....+.+.+.++| +|+|.++..
T Consensus 145 ~~~~~~~~~l~~~~~~L---kpgG~l~~~ 170 (235)
T 3lcc_A 145 IEPEMRPAWAKSMYELL---KPDGELITL 170 (235)
T ss_dssp SCGGGHHHHHHHHHHHE---EEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHC---CCCcEEEEE
Confidence 2 2356788999999 999988753
No 396
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=95.89 E-value=0.012 Score=58.71 Aligned_cols=45 Identities=31% Similarity=0.321 Sum_probs=40.8
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF 585 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F 585 (659)
...+||=||.|.|.+...+...+|..++++||+++.+++.|++.+
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~ 93 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRI 93 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHH
Confidence 456899999999999999999999889999999999999997653
No 397
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=95.89 E-value=0.018 Score=58.47 Aligned_cols=81 Identities=12% Similarity=0.142 Sum_probs=62.0
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCC----------------CCCCeeEE-----
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFT----------------QDKSLKVF----- 596 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~----------------~d~rl~vf----- 596 (659)
.+.+||-||.|.|.+...+... ..++++||++|.+++.|++.+ |+. .+...|+.
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 145 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAV 145 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESC
T ss_pred CCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECch
Confidence 3579999999999999999887 569999999999999999875 221 12233433
Q ss_pred -ecc-cchhHHHHHHHhhccCCCCcEEEecCc
Q 006149 597 -NHL-FCLQLEEDVNLVLFGLSSESCIKDNSF 626 (659)
Q Consensus 597 -~~l-~~~~f~~~~~~~Lf~~~~~g~~~~n~~ 626 (659)
.|+ ....+.+.+.++| +|+|.+....+
T Consensus 146 l~~~~~~~~~l~~~~~~L---kpgG~l~~~~~ 174 (285)
T 4htf_A 146 LEWVADPRSVLQTLWSVL---RPGGVLSLMFY 174 (285)
T ss_dssp GGGCSCHHHHHHHHHHTE---EEEEEEEEEEE
T ss_pred hhcccCHHHHHHHHHHHc---CCCeEEEEEEe
Confidence 233 2357889999999 99999887664
No 398
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=95.88 E-value=0.013 Score=56.22 Aligned_cols=81 Identities=19% Similarity=0.272 Sum_probs=58.0
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCC------------CCCeeEE-e-ccc--c
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQ------------DKSLKVF-N-HLF--C 601 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~------------d~rl~vf-~-~l~--~ 601 (659)
...+||-||.|.|.+...+.+. +..++++||+++.+++.|++.+ ++.. +...|+. . ..+ .
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~~~~~~ 138 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKL-GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANILAEIL 138 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEESCHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECCcHHHH
Confidence 4579999999999999998874 6669999999999999999875 3221 1222332 1 111 2
Q ss_pred hhHHHHHHHhhccCCCCcEEEecC
Q 006149 602 LQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 602 ~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
..+.+.+.++| +++|.++...
T Consensus 139 ~~~l~~~~~~L---~~gG~l~~~~ 159 (205)
T 3grz_A 139 LDLIPQLDSHL---NEDGQVIFSG 159 (205)
T ss_dssp HHHGGGSGGGE---EEEEEEEEEE
T ss_pred HHHHHHHHHhc---CCCCEEEEEe
Confidence 45566777788 9999887753
No 399
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=95.86 E-value=0.012 Score=55.84 Aligned_cols=78 Identities=14% Similarity=0.103 Sum_probs=58.2
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCC-------------CCCCeeEE------ec
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFT-------------QDKSLKVF------NH 598 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~-------------~d~rl~vf------~~ 598 (659)
.+.+||-||.|.|.+...+... ..++++||+++.+++.|++.+ +++ .+...|+. .|
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l~~ 109 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFILSTVVLMF 109 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCCEEEEEEESCGGG
T ss_pred CCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCCceEEEEcchhhh
Confidence 4569999999999999999887 469999999999999998864 221 12233433 23
Q ss_pred c---cchhHHHHHHHhhccCCCCcEEEe
Q 006149 599 L---FCLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 599 l---~~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
+ ....+.+.+.++| +++|.+..
T Consensus 110 ~~~~~~~~~l~~~~~~L---~~gG~l~~ 134 (199)
T 2xvm_A 110 LEAKTIPGLIANMQRCT---KPGGYNLI 134 (199)
T ss_dssp SCGGGHHHHHHHHHHTE---EEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhc---CCCeEEEE
Confidence 3 2356788899999 99997544
No 400
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=95.86 E-value=0.02 Score=56.46 Aligned_cols=81 Identities=22% Similarity=0.198 Sum_probs=61.7
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCC-----------CCCCeeEE------ecccc-
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-----------QDKSLKVF------NHLFC- 601 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~-----------~d~rl~vf------~~l~~- 601 (659)
....+||-||.|.|.+...+... +.++++||+++.+++.|++...+. ++...|+. +|+-.
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~~ 117 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGKFNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDPE 117 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTTSEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCGG
T ss_pred cCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhhcceeeccHHHHhhhcCCCCeeEEEECCchhhCCcH
Confidence 34579999999999999999987 457999999999999998752111 23345544 45532
Q ss_pred --hhHHHHHHHhhccCCCCcEEEecC
Q 006149 602 --LQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 602 --~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
..+.+.++++| +|+|.+....
T Consensus 118 ~~~~~l~~~~~~L---kpgG~l~~~~ 140 (240)
T 3dli_A 118 RLFELLSLCYSKM---KYSSYIVIES 140 (240)
T ss_dssp GHHHHHHHHHHHB---CTTCCEEEEE
T ss_pred HHHHHHHHHHHHc---CCCcEEEEEe
Confidence 57889999999 9999887654
No 401
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=95.82 E-value=0.017 Score=58.84 Aligned_cols=81 Identities=21% Similarity=0.289 Sum_probs=60.9
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCC---------------CCCCeeEE-----
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFT---------------QDKSLKVF----- 596 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~---------------~d~rl~vf----- 596 (659)
....+||-||.|.|.+...+...++ .++++||+++.+++.|++.+ |+. ++...|+.
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 159 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFG-VSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDA 159 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecch
Confidence 3457999999999999999988763 59999999999999998764 221 12234443
Q ss_pred -eccc-chhHHHHHHHhhccCCCCcEEEec
Q 006149 597 -NHLF-CLQLEEDVNLVLFGLSSESCIKDN 624 (659)
Q Consensus 597 -~~l~-~~~f~~~~~~~Lf~~~~~g~~~~n 624 (659)
.|+- ...+.+.++++| +|+|.++..
T Consensus 160 l~~~~~~~~~l~~~~~~L---kpgG~l~~~ 186 (297)
T 2o57_A 160 FLHSPDKLKVFQECARVL---KPRGVMAIT 186 (297)
T ss_dssp GGGCSCHHHHHHHHHHHE---EEEEEEEEE
T ss_pred hhhcCCHHHHHHHHHHHc---CCCeEEEEE
Confidence 2332 367889999999 999987664
No 402
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=95.82 E-value=0.016 Score=56.15 Aligned_cols=80 Identities=14% Similarity=0.103 Sum_probs=58.5
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHH----HHhh---cCCC-------------C-CCCeeEEecc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNL----AEDY---FGFT-------------Q-DKSLKVFNHL 599 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~v----A~~~---Fgl~-------------~-d~rl~vf~~l 599 (659)
...+||=||.|.|.+...+...+|..++++||+++.+++. |++. -+++ . +.. +.+..+
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~ 105 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHVL 105 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEEE
Confidence 4568999999999999999999999999999999997774 3321 1221 0 111 444322
Q ss_pred c------------chhHHHHHHHhhccCCCCcEEEec
Q 006149 600 F------------CLQLEEDVNLVLFGLSSESCIKDN 624 (659)
Q Consensus 600 ~------------~~~f~~~~~~~Lf~~~~~g~~~~n 624 (659)
+ ...+.+.+.++| +|+|.+...
T Consensus 106 ~~~~~~~~~~~~~~~~~l~~~~~~L---kpgG~l~~~ 139 (218)
T 3mq2_A 106 MPWGSLLRGVLGSSPEMLRGMAAVC---RPGASFLVA 139 (218)
T ss_dssp SCCHHHHHHHHTSSSHHHHHHHHTE---EEEEEEEEE
T ss_pred ccchhhhhhhhccHHHHHHHHHHHc---CCCcEEEEE
Confidence 2 267888999999 999988763
No 403
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=95.81 E-value=0.014 Score=56.29 Aligned_cols=82 Identities=11% Similarity=0.033 Sum_probs=57.5
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCC--------------CCCeeEE-ecccc
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQ--------------DKSLKVF-NHLFC 601 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~--------------d~rl~vf-~~l~~ 601 (659)
....+||-||.|.|.+...+.+. ..++++||++|.+++.|++.+ ++.. +...|+. .....
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~ 153 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAP 153 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSBC
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccch
Confidence 34579999999999999999988 469999999999999999876 3320 1112222 11111
Q ss_pred hhHHHHHHHhhccCCCCcEEEecCc
Q 006149 602 LQLEEDVNLVLFGLSSESCIKDNSF 626 (659)
Q Consensus 602 ~~f~~~~~~~Lf~~~~~g~~~~n~~ 626 (659)
..+.+.+.+.| +++|.++....
T Consensus 154 ~~~~~~~~~~L---~pgG~lv~~~~ 175 (210)
T 3lbf_A 154 PEIPTALMTQL---DEGGILVLPVG 175 (210)
T ss_dssp SSCCTHHHHTE---EEEEEEEEEEC
T ss_pred hhhhHHHHHhc---ccCcEEEEEEc
Confidence 12234678889 99998877553
No 404
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=95.80 E-value=0.029 Score=52.50 Aligned_cols=81 Identities=16% Similarity=0.157 Sum_probs=59.7
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCC--------------C-CCeeEE--ecc
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQ--------------D-KSLKVF--NHL 599 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~--------------d-~rl~vf--~~l 599 (659)
....+||-||.|.|.+...+.... .++++||+++.+++.|++.+ ++.. + ...|+. ...
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 109 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVVGGS 109 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEESCC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCCCCEEEECCc
Confidence 345699999999999999999887 69999999999999999864 3310 0 122322 111
Q ss_pred --cchhHHHHHHHhhccCCCCcEEEecC
Q 006149 600 --FCLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 600 --~~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
....+.+.+.++| +++|.++...
T Consensus 110 ~~~~~~~l~~~~~~l---~~gG~l~~~~ 134 (192)
T 1l3i_A 110 GGELQEILRIIKDKL---KPGGRIIVTA 134 (192)
T ss_dssp TTCHHHHHHHHHHTE---EEEEEEEEEE
T ss_pred hHHHHHHHHHHHHhc---CCCcEEEEEe
Confidence 1367788888999 9999887754
No 405
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=95.80 E-value=0.048 Score=53.67 Aligned_cols=81 Identities=16% Similarity=0.110 Sum_probs=60.9
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCC---------------CCCeeE-Eeccc-
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQ---------------DKSLKV-FNHLF- 600 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~---------------d~rl~v-f~~l~- 600 (659)
...+||.+|.|.|.+...+.+. ..++++||+++..++.|++.+ ++.. +...|+ +.+.-
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~ 168 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDVRE 168 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEECSSC
T ss_pred CCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEECCcC
Confidence 3468999999999999999888 569999999999999999875 4411 112232 23332
Q ss_pred chhHHHHHHHhhccCCCCcEEEecCc
Q 006149 601 CLQLEEDVNLVLFGLSSESCIKDNSF 626 (659)
Q Consensus 601 ~~~f~~~~~~~Lf~~~~~g~~~~n~~ 626 (659)
...+.+.+.++| +++|.++....
T Consensus 169 ~~~~l~~~~~~L---~~gG~l~~~~~ 191 (248)
T 2yvl_A 169 PWHYLEKVHKSL---MEGAPVGFLLP 191 (248)
T ss_dssp GGGGHHHHHHHB---CTTCEEEEEES
T ss_pred HHHHHHHHHHHc---CCCCEEEEEeC
Confidence 348889999999 99998877553
No 406
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=95.78 E-value=0.017 Score=57.51 Aligned_cols=45 Identities=24% Similarity=0.249 Sum_probs=40.2
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhh
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDY 584 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~ 584 (659)
....+||=||-|.|.+...|...+|+..+++||+++.+++.|++.
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~ 89 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDR 89 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHH
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHH
Confidence 345689999999999999999999999999999999999998753
No 407
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=95.78 E-value=0.0017 Score=84.99 Aligned_cols=105 Identities=16% Similarity=0.121 Sum_probs=53.9
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-C-----CCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCC-CCCCCcccEEE
Q 006149 67 SPPPQILVPGCGNSRLSEHLYDA-G-----FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM-QFMDETFDVIL 139 (659)
Q Consensus 67 ~~~~~ILDiGCG~G~~s~~La~~-g-----~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l-~~~~~sFDvVi 139 (659)
.+..+|||||.|+|..+..+.+. + +.+++..|+|+.+.+.+++++.. ..+..-..|..+. ++...+||+|+
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~--~di~~~~~d~~~~~~~~~~~ydlvi 1316 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQ--LHVTQGQWDPANPAPGSLGKADLLV 1316 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHH--HTEEEECCCSSCCCC-----CCEEE
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhh--cccccccccccccccCCCCceeEEE
Confidence 35679999999999876554432 1 45799999998777666555422 1222222243332 33456899999
Q ss_pred ecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 140 DKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 140 ~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+..+++...+. ...+.+++++|||||++++.+..
T Consensus 1317 a~~vl~~t~~~-------~~~l~~~~~lL~p~G~l~~~e~~ 1350 (2512)
T 2vz8_A 1317 CNCALATLGDP-------AVAVGNMAATLKEGGFLLLHTLL 1350 (2512)
T ss_dssp EECC---------------------------CCEEEEEEC-
T ss_pred EcccccccccH-------HHHHHHHHHhcCCCcEEEEEecc
Confidence 99999876554 37899999999999999987653
No 408
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=95.78 E-value=0.015 Score=59.56 Aligned_cols=82 Identities=17% Similarity=0.066 Sum_probs=62.1
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCC-------------------CCCCCee-EE-e--
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-------------------TQDKSLK-VF-N-- 597 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl-------------------~~d~rl~-vf-~-- 597 (659)
.+.+||-||.|.|.+...|... ..++++||++|.+++.|++.+.- +.+...| |+ .
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~ 159 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALDKRFGTVVISSG 159 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCSCCEEEEEECHH
T ss_pred CCCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcCCCcCEEEECCc
Confidence 3459999999999999999887 46899999999999999986531 1233445 32 1
Q ss_pred --cccc----hhHHHHHHHhhccCCCCcEEEecCch
Q 006149 598 --HLFC----LQLEEDVNLVLFGLSSESCIKDNSFP 627 (659)
Q Consensus 598 --~l~~----~~f~~~~~~~Lf~~~~~g~~~~n~~~ 627 (659)
+... ..+.+.+.++| +|+|.++...+.
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~L---~pgG~l~~~~~~ 192 (299)
T 3g2m_A 160 SINELDEADRRGLYASVREHL---EPGGKFLLSLAM 192 (299)
T ss_dssp HHTTSCHHHHHHHHHHHHHHE---EEEEEEEEEEEC
T ss_pred ccccCCHHHHHHHHHHHHHHc---CCCcEEEEEeec
Confidence 2222 67888999999 999998886643
No 409
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=95.77 E-value=0.025 Score=55.73 Aligned_cols=81 Identities=10% Similarity=0.033 Sum_probs=58.3
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCC------------------CCCCeeEE-e----
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT------------------QDKSLKVF-N---- 597 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~------------------~d~rl~vf-~---- 597 (659)
...+||-||.|.|.+...+....+. ++++||+++.+++.|++.+.-. ++...|+. .
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~ 138 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred CCCeEEEEeccCCHHHHHHHhcCCC-eEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCcc
Confidence 3469999999999999999765543 8999999999999999977211 11233333 1
Q ss_pred -cccc------hhHHHHHHHhhccCCCCcEEEecC
Q 006149 598 -HLFC------LQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 598 -~l~~------~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
+.-. ..+++.++++| +|+|.+..-.
T Consensus 139 ~~~~~~~~~~~~~~l~~~~r~L---kpgG~l~~~~ 170 (236)
T 1zx0_A 139 LSEETWHTHQFNFIKNHAFRLL---KPGGVLTYCN 170 (236)
T ss_dssp CBGGGTTTHHHHHHHHTHHHHE---EEEEEEEECC
T ss_pred cchhhhhhhhHHHHHHHHHHhc---CCCeEEEEEe
Confidence 0101 14578899999 9999988543
No 410
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=95.75 E-value=0.022 Score=55.68 Aligned_cols=80 Identities=19% Similarity=0.189 Sum_probs=57.3
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCC---------------CCCCeeEE-ecccchhH
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT---------------QDKSLKVF-NHLFCLQL 604 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~---------------~d~rl~vf-~~l~~~~f 604 (659)
...+||-||.|.|.+...+.... .++++||+++.+++.|++.+.-. .+...|+. ..-....+
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~ 147 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWATAPTL 147 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESSBBSSC
T ss_pred CCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEEEECCcHHHH
Confidence 44699999999999999999886 69999999999999999886421 11223332 11111223
Q ss_pred HHHHHHhhccCCCCcEEEecC
Q 006149 605 EEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 605 ~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
.+.+.++| +++|.++...
T Consensus 148 ~~~~~~~L---~pgG~l~~~~ 165 (231)
T 1vbf_A 148 LCKPYEQL---KEGGIMILPI 165 (231)
T ss_dssp CHHHHHTE---EEEEEEEEEE
T ss_pred HHHHHHHc---CCCcEEEEEE
Confidence 35788899 9999877644
No 411
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=95.73 E-value=0.012 Score=60.77 Aligned_cols=80 Identities=14% Similarity=0.060 Sum_probs=61.5
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCC---------------CCCCeeEE-----
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFT---------------QDKSLKVF----- 596 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~---------------~d~rl~vf----- 596 (659)
....+||-||.|.|.+...+...+ ..++++||+++.+++.|++.+ |+. ++...|+.
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 194 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNES 194 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESC
T ss_pred CCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCc
Confidence 345799999999999999998875 469999999999999999863 222 12233433
Q ss_pred -ecccchhHHHHHHHhhccCCCCcEEEe
Q 006149 597 -NHLFCLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 597 -~~l~~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
.|+-...+++.+.++| +|+|.++.
T Consensus 195 l~~~~~~~~l~~~~~~L---kpgG~l~~ 219 (312)
T 3vc1_A 195 TMYVDLHDLFSEHSRFL---KVGGRYVT 219 (312)
T ss_dssp GGGSCHHHHHHHHHHHE---EEEEEEEE
T ss_pred hhhCCHHHHHHHHHHHc---CCCcEEEE
Confidence 3444578899999999 99997765
No 412
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=95.70 E-value=0.024 Score=60.63 Aligned_cols=92 Identities=14% Similarity=0.099 Sum_probs=66.0
Q ss_pred CCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCC----------------CCCCeeEE-e----
Q 006149 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFT----------------QDKSLKVF-N---- 597 (659)
Q Consensus 542 ~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~----------------~d~rl~vf-~---- 597 (659)
..+||=||.|.|.+...+...+|..+|++||+++.+++.|++-+ |+. ++.+.|+. .
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~~fD~Ii~nppf 302 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPF 302 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTTCEEEEEECCCC
T ss_pred CCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCCCeeEEEECCCc
Confidence 37999999999999999999999999999999999999999754 221 11233432 1
Q ss_pred c----c---cchhHHHHHHHhhccCCCCcEEEe--cCchHHHHHHHhh
Q 006149 598 H----L---FCLQLEEDVNLVLFGLSSESCIKD--NSFPEAAVQLGKL 636 (659)
Q Consensus 598 ~----l---~~~~f~~~~~~~Lf~~~~~g~~~~--n~~~~~~~~l~~~ 636 (659)
| + ...++.+.+.++| +++|.+.. |........++++
T Consensus 303 h~~~~~~~~~~~~~l~~~~~~L---kpgG~l~iv~n~~~~~~~~l~~~ 347 (375)
T 4dcm_A 303 HQQHALTDNVAWEMFHHARRCL---KINGELYIVANRHLDYFHKLKKI 347 (375)
T ss_dssp -------CCHHHHHHHHHHHHE---EEEEEEEEEEETTSCHHHHHHHH
T ss_pred ccCcccCHHHHHHHHHHHHHhC---CCCcEEEEEEECCcCHHHHHHHh
Confidence 0 1 1236789999999 99997655 6544334444443
No 413
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=95.70 E-value=0.012 Score=56.98 Aligned_cols=78 Identities=14% Similarity=0.213 Sum_probs=61.1
Q ss_pred CCCeEEEEccCcchHHHHHHhhCC-CccEEEEecChhHHHHHHhhc---CCCCCCCeeE--------------Eec----
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKV--------------FNH---- 598 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p-~~~i~~VEiDp~V~~vA~~~F---gl~~d~rl~v--------------f~~---- 598 (659)
.+.+||-||.|.|..+.++...+| ..++++||+++.+++.|++.+ ++. +++++ |+-
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~fD~v~~~ 133 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLI--DRVELQVGDPLGIAAGQRDIDILFMD 133 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGG--GGEEEEESCHHHHHTTCCSEEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC--ceEEEEEecHHHHhccCCCCCEEEEc
Confidence 457999999999999999999887 789999999999999999876 321 11110 322
Q ss_pred ---ccchhHHHHHHHhhccCCCCcEEEe
Q 006149 599 ---LFCLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 599 ---l~~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
-....+++.+.++| +++|+++.
T Consensus 134 ~~~~~~~~~l~~~~~~L---kpgG~lv~ 158 (210)
T 3c3p_A 134 CDVFNGADVLERMNRCL---AKNALLIA 158 (210)
T ss_dssp TTTSCHHHHHHHHGGGE---EEEEEEEE
T ss_pred CChhhhHHHHHHHHHhc---CCCeEEEE
Confidence 23457788899999 99998876
No 414
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=95.70 E-value=0.02 Score=55.86 Aligned_cols=82 Identities=9% Similarity=0.045 Sum_probs=58.5
Q ss_pred CCCeEEEEccCcchHHHHHHhhC-CCccEEEEecChhHHHHHHhhcC---C-----C--------------CCCCeeEE-
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFG---F-----T--------------QDKSLKVF- 596 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~-p~~~i~~VEiDp~V~~vA~~~Fg---l-----~--------------~d~rl~vf- 596 (659)
...+||-||.|.|.+...+.+.+ |..++++||+++.+++.|++.+. + . .+...|+.
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~ 156 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIH 156 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEE
Confidence 34699999999999999888875 66799999999999999987652 1 1 01112322
Q ss_pred ecccchhHHHHHHHhhccCCCCcEEEecC
Q 006149 597 NHLFCLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 597 ~~l~~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
.......+.+.+.++| +++|.++...
T Consensus 157 ~~~~~~~~~~~~~~~L---kpgG~lv~~~ 182 (226)
T 1i1n_A 157 VGAAAPVVPQALIDQL---KPGGRLILPV 182 (226)
T ss_dssp ECSBBSSCCHHHHHTE---EEEEEEEEEE
T ss_pred ECCchHHHHHHHHHhc---CCCcEEEEEE
Confidence 1112234557888899 9999887754
No 415
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=95.68 E-value=0.026 Score=57.33 Aligned_cols=81 Identities=12% Similarity=0.120 Sum_probs=61.1
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc--------------------CC----CCCCCeeEE
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF--------------------GF----TQDKSLKVF 596 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F--------------------gl----~~d~rl~vf 596 (659)
.+.+||=||.|.|.++..|.... .++++||++|.+++.|++.. .+ ..+...|+.
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V 134 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEG--FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAV 134 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEE
Confidence 45799999999999999998874 48999999999999997632 11 123345544
Q ss_pred -------eccc--------chhHHHHHHHhhccCCCCcEEEecCc
Q 006149 597 -------NHLF--------CLQLEEDVNLVLFGLSSESCIKDNSF 626 (659)
Q Consensus 597 -------~~l~--------~~~f~~~~~~~Lf~~~~~g~~~~n~~ 626 (659)
.|+. ...+++.+.++| +|+|.+.....
T Consensus 135 ~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~L---kpgG~l~~~~~ 176 (293)
T 3thr_A 135 ICLGNSFAHLPDSKGDQSEHRLALKNIASMV---RPGGLLVIDHR 176 (293)
T ss_dssp EECTTCGGGSCCSSSSSHHHHHHHHHHHHTE---EEEEEEEEEEE
T ss_pred EEcChHHhhcCccccCHHHHHHHHHHHHHHc---CCCeEEEEEeC
Confidence 2333 357888999999 99998887553
No 416
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=95.68 E-value=0.015 Score=59.09 Aligned_cols=44 Identities=23% Similarity=0.266 Sum_probs=41.0
Q ss_pred CCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc
Q 006149 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF 585 (659)
Q Consensus 542 ~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F 585 (659)
+.+||=||.|.|.+...+...+|..++++||+++..+++|++-+
T Consensus 110 ~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~ 153 (276)
T 2b3t_A 110 PCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNA 153 (276)
T ss_dssp CCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHH
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999765
No 417
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=95.67 E-value=0.023 Score=57.58 Aligned_cols=82 Identities=15% Similarity=0.134 Sum_probs=62.6
Q ss_pred CCCeEEEEccCcchHHHHHHhh-CCCccEEEEecChhHHHHHHhhc---CCCC--------------CCCeeEE-ecc-c
Q 006149 541 KSVKAVVIGLGAGLLPMFLHEC-MPFVGIEAVELDLTMLNLAEDYF---GFTQ--------------DKSLKVF-NHL-F 600 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~-~p~~~i~~VEiDp~V~~vA~~~F---gl~~--------------d~rl~vf-~~l-~ 600 (659)
...+||-+|.|.|.+...+... .|..++++||++|..++.|++.+ ++.+ +...|+. .++ .
T Consensus 112 ~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~V~~~~~~ 191 (277)
T 1o54_A 112 EGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDVDALFLDVPD 191 (277)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCSEEEEEECCSC
T ss_pred CCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCccCEEEECCcC
Confidence 3468999999999999999988 67889999999999999999875 4311 1123322 223 2
Q ss_pred chhHHHHHHHhhccCCCCcEEEecC
Q 006149 601 CLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 601 ~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
...+.+.+.++| +++|.++...
T Consensus 192 ~~~~l~~~~~~L---~pgG~l~~~~ 213 (277)
T 1o54_A 192 PWNYIDKCWEAL---KGGGRFATVC 213 (277)
T ss_dssp GGGTHHHHHHHE---EEEEEEEEEE
T ss_pred HHHHHHHHHHHc---CCCCEEEEEe
Confidence 348889999999 9999887644
No 418
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=95.64 E-value=0.023 Score=59.02 Aligned_cols=85 Identities=14% Similarity=0.085 Sum_probs=60.4
Q ss_pred CCCeEEEEccCcchHHHHHHhhCC-CccEEEEecChhHHHHHHhhc---CCCC--------------CCCeeEE-ecccc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQ--------------DKSLKVF-NHLFC 601 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p-~~~i~~VEiDp~V~~vA~~~F---gl~~--------------d~rl~vf-~~l~~ 601 (659)
...+||-||.|.|.++..+.+..+ ..+|++||+++.+++.|++.+ |+.. +...|+. ..-..
T Consensus 75 ~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~~~~ 154 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVTVGV 154 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSBB
T ss_pred CcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEcCCH
Confidence 346999999999999999998876 478999999999999999876 3321 1122322 11111
Q ss_pred hhHHHHHHHhhccCCCCcEEEecCchH
Q 006149 602 LQLEEDVNLVLFGLSSESCIKDNSFPE 628 (659)
Q Consensus 602 ~~f~~~~~~~Lf~~~~~g~~~~n~~~~ 628 (659)
..+.+.+.++| +|+|.++..+.+.
T Consensus 155 ~~~~~~~~~~L---kpgG~lvi~~~~~ 178 (317)
T 1dl5_A 155 DEVPETWFTQL---KEGGRVIVPINLK 178 (317)
T ss_dssp SCCCHHHHHHE---EEEEEEEEEBCBG
T ss_pred HHHHHHHHHhc---CCCcEEEEEECCC
Confidence 12236788899 9999988876443
No 419
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=95.63 E-value=0.015 Score=59.89 Aligned_cols=83 Identities=11% Similarity=-0.030 Sum_probs=61.9
Q ss_pred CCCCeEEEEccCcchHHHHHH-hhCCCccEEEEecChhHHHHHHhhcCCCC-C----------------CCeeEE-----
Q 006149 540 GKSVKAVVIGLGAGLLPMFLH-ECMPFVGIEAVELDLTMLNLAEDYFGFTQ-D----------------KSLKVF----- 596 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~-~~~p~~~i~~VEiDp~V~~vA~~~Fgl~~-d----------------~rl~vf----- 596 (659)
....+||-||.|.|.+...+. ...|..++++||++|.+++.|++.+.-.. . ...|+.
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~ 196 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSNGL 196 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECCSS
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEECCh
Confidence 445789999999999999885 56788999999999999999998874211 1 222332
Q ss_pred -ecccch----hHHHHHHHhhccCCCCcEEEecC
Q 006149 597 -NHLFCL----QLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 597 -~~l~~~----~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
.|+-.. .+.+.+.++| +|+|.++...
T Consensus 197 ~~~~~~~~~~~~~l~~~~~~L---kpgG~l~i~~ 227 (305)
T 3ocj_A 197 NIYEPDDARVTELYRRFWQAL---KPGGALVTSF 227 (305)
T ss_dssp GGGCCCHHHHHHHHHHHHHHE---EEEEEEEEEC
T ss_pred hhhcCCHHHHHHHHHHHHHhc---CCCeEEEEEe
Confidence 222222 3689999999 9999888644
No 420
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=95.61 E-value=0.045 Score=55.85 Aligned_cols=80 Identities=16% Similarity=0.141 Sum_probs=56.8
Q ss_pred CCCeEEEEccCcchHHH----HHHhhCCCccE--EEEecChhHHHHHHhhcC----CC----------------------
Q 006149 541 KSVKAVVIGLGAGLLPM----FLHECMPFVGI--EAVELDLTMLNLAEDYFG----FT---------------------- 588 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~----~l~~~~p~~~i--~~VEiDp~V~~vA~~~Fg----l~---------------------- 588 (659)
.+.+||-||.|.|.+.. .+...+|.+++ ++||+++.+++.|++.+. ++
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 45699999999997553 34445577755 999999999999987651 11
Q ss_pred CCCCeeEE------eccc-chhHHHHHHHhhccCCCCcEEEe
Q 006149 589 QDKSLKVF------NHLF-CLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 589 ~d~rl~vf------~~l~-~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
++...|+. .|+- -..+...++++| +|+|.++.
T Consensus 132 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~L---kpgG~l~i 170 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYVKDIPATLKFFHSLL---GTNAKMLI 170 (292)
T ss_dssp CCCCEEEEEEESCGGGCSCHHHHHHHHHHTE---EEEEEEEE
T ss_pred CCCceeEEEEeeeeeecCCHHHHHHHHHHHc---CCCcEEEE
Confidence 12334443 3342 356889999999 99998765
No 421
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.61 E-value=0.027 Score=56.93 Aligned_cols=58 Identities=12% Similarity=0.044 Sum_probs=47.0
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhc
Q 006149 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR 113 (659)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~ 113 (659)
..+...+.+... .+++.|||+.||+|..+......|. +++|+|+++.+++.++++...
T Consensus 199 ~~l~~~~i~~~~----~~~~~vlD~f~GsGtt~~~a~~~gr-~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 199 RDLIERIIRASS----NPNDLVLDCFMGSGTTAIVAKKLGR-NFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp HHHHHHHHHHHC----CTTCEEEESSCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC----CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHh
Confidence 345555555554 3789999999999999999988885 999999999999988877643
No 422
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=95.61 E-value=0.037 Score=58.32 Aligned_cols=80 Identities=23% Similarity=0.253 Sum_probs=57.0
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCC--------------CCCeeEE------e
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQ--------------DKSLKVF------N 597 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~--------------d~rl~vf------~ 597 (659)
...+||-||.|.|.+..++.+. +..+|++||+++ +++.|++.+ |+.+ .++.|+. .
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGY 127 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEEECCCBT
T ss_pred CcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCceeEEEEeCchh
Confidence 4579999999999999999886 556999999997 778888764 3321 1233433 2
Q ss_pred cccc---hhHHHHHHHhhccCCCCcEEEecC
Q 006149 598 HLFC---LQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 598 ~l~~---~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
|+.. .+++..++++| +|+|.++.+.
T Consensus 128 ~~~~~~~~~~l~~~~~~L---kpgG~li~~~ 155 (348)
T 2y1w_A 128 MLFNERMLESYLHAKKYL---KPSGNMFPTI 155 (348)
T ss_dssp TBTTTSHHHHHHHGGGGE---EEEEEEESCE
T ss_pred cCChHHHHHHHHHHHhhc---CCCeEEEEec
Confidence 2322 35566778888 9999987653
No 423
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=95.61 E-value=0.035 Score=56.01 Aligned_cols=82 Identities=16% Similarity=0.142 Sum_probs=61.9
Q ss_pred CCCeEEEEccCcchHHHHHHhh-CCCccEEEEecChhHHHHHHhhc----C-CCC---------------CCCeeE-Eec
Q 006149 541 KSVKAVVIGLGAGLLPMFLHEC-MPFVGIEAVELDLTMLNLAEDYF----G-FTQ---------------DKSLKV-FNH 598 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~-~p~~~i~~VEiDp~V~~vA~~~F----g-l~~---------------d~rl~v-f~~ 598 (659)
...+||-||.|.|.+...+.+. .|..++++||++|.+++.|++.+ | +.. +...|+ +.+
T Consensus 99 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~~ 178 (280)
T 1i9g_A 99 PGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVLD 178 (280)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEEE
T ss_pred CCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEEC
Confidence 3468999999999999999885 57789999999999999999876 4 111 112232 223
Q ss_pred c-cchhHHHHHHHhhccCCCCcEEEecC
Q 006149 599 L-FCLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 599 l-~~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
+ ...++.+.+.++| +++|.++..+
T Consensus 179 ~~~~~~~l~~~~~~L---~pgG~l~~~~ 203 (280)
T 1i9g_A 179 MLAPWEVLDAVSRLL---VAGGVLMVYV 203 (280)
T ss_dssp SSCGGGGHHHHHHHE---EEEEEEEEEE
T ss_pred CcCHHHHHHHHHHhC---CCCCEEEEEe
Confidence 3 2348899999999 9999887755
No 424
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=95.55 E-value=0.033 Score=57.81 Aligned_cols=80 Identities=20% Similarity=0.302 Sum_probs=60.0
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCC--------------CCCCeeEE------
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFT--------------QDKSLKVF------ 596 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~--------------~d~rl~vf------ 596 (659)
....+||-||.|.|.+...+...+|..+++++|++ .+++.|++.+ ++. .....|++
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~l 242 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGNDYDLVLLPNFL 242 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSCEEEEEEESCG
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCCCcEEEEcchh
Confidence 34579999999999999999999999999999999 9999998864 221 11124443
Q ss_pred ecc---cchhHHHHHHHhhccCCCCcEEEe
Q 006149 597 NHL---FCLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 597 ~~l---~~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
.++ ....+.+.++++| +|+|.+..
T Consensus 243 ~~~~~~~~~~~l~~~~~~L---~pgG~l~i 269 (335)
T 2r3s_A 243 HHFDVATCEQLLRKIKTAL---AVEGKVIV 269 (335)
T ss_dssp GGSCHHHHHHHHHHHHHHE---EEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhC---CCCcEEEE
Confidence 122 1247788899999 99995543
No 425
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=95.54 E-value=0.013 Score=61.99 Aligned_cols=80 Identities=16% Similarity=0.098 Sum_probs=60.2
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCC----------C---CCeeEE------e
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQ----------D---KSLKVF------N 597 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~----------d---~rl~vf------~ 597 (659)
....+||-||.|.|.+...+...+|+.+++++|+ |.+++.|++.+ ++.. + ...|++ .
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~ 259 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSFVLL 259 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCCEEEEEEESCGG
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCCCCCEEEEecccc
Confidence 3467999999999999999999999999999999 99999999864 2210 0 113433 1
Q ss_pred cccc---hhHHHHHHHhhccCCCCcEEEe
Q 006149 598 HLFC---LQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 598 ~l~~---~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
++-. ..+.+.++++| +|+|.+..
T Consensus 260 ~~~~~~~~~~l~~~~~~L---~pgG~l~i 285 (374)
T 1qzz_A 260 NWSDEDALTILRGCVRAL---EPGGRLLV 285 (374)
T ss_dssp GSCHHHHHHHHHHHHHHE---EEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhc---CCCcEEEE
Confidence 2222 36888999999 99996554
No 426
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=95.52 E-value=0.032 Score=59.09 Aligned_cols=76 Identities=9% Similarity=0.029 Sum_probs=57.5
Q ss_pred hHHHHHHHHhhCCCC---CCCCCeEEEECCCcchHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecC
Q 006149 51 PQLRDPLISLIGAPT---SSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMT 126 (659)
Q Consensus 51 ~~l~~~l~~~l~~~~---~~~~~~ILDiGCG~G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~ 126 (659)
+.++..+.+.+.... ..++..|||||.|.|.+|..|++. ...+|+++++.+.++..+.+.. ..++++++.+|+.
T Consensus 38 ~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~--~~~~l~ii~~D~l 115 (353)
T 1i4w_A 38 PTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF--EGSPLQILKRDPY 115 (353)
T ss_dssp HHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT--TTSSCEEECSCTT
T ss_pred HHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc--cCCCEEEEECCcc
Confidence 355555666664300 003589999999999999999986 3458999999999998776665 3578999999996
Q ss_pred CC
Q 006149 127 SM 128 (659)
Q Consensus 127 ~l 128 (659)
++
T Consensus 116 ~~ 117 (353)
T 1i4w_A 116 DW 117 (353)
T ss_dssp CH
T ss_pred ch
Confidence 65
No 427
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=95.51 E-value=0.025 Score=53.84 Aligned_cols=81 Identities=14% Similarity=0.077 Sum_probs=60.0
Q ss_pred CCeEEEEccCcchHHHHHHhhC-CCccEEEEecChhHHHHHHhhc---CCC----------------CCCCeeEE-ecc-
Q 006149 542 SVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYF---GFT----------------QDKSLKVF-NHL- 599 (659)
Q Consensus 542 ~~~vLiiGlGgG~l~~~l~~~~-p~~~i~~VEiDp~V~~vA~~~F---gl~----------------~d~rl~vf-~~l- 599 (659)
..+||-+|.|.|.+...+...+ |..++++||+++.+++.|++.+ |+. .+...|+. ...
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 102 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLG 102 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEES
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcCC
Confidence 4699999999999999998875 6679999999999999999875 221 01122322 111
Q ss_pred c--------------chhHHHHHHHhhccCCCCcEEEecC
Q 006149 600 F--------------CLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 600 ~--------------~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
+ ...+.+.+.++| +++|.++...
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~~~L---k~gG~l~~~~ 139 (197)
T 3eey_A 103 YLPSGDHSISTRPETTIQALSKAMELL---VTGGIITVVI 139 (197)
T ss_dssp BCTTSCTTCBCCHHHHHHHHHHHHHHE---EEEEEEEEEE
T ss_pred cccCcccccccCcccHHHHHHHHHHhC---cCCCEEEEEE
Confidence 1 136889999999 9999887654
No 428
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=95.48 E-value=0.048 Score=51.07 Aligned_cols=81 Identities=12% Similarity=0.177 Sum_probs=60.0
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCC-----------C-CCCCeeEE--e-ccc----
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-----------T-QDKSLKVF--N-HLF---- 600 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl-----------~-~d~rl~vf--~-~l~---- 600 (659)
+...+||-||.|.|.+...+... +.++++||+++.+++.|++.+.- + ++...|+. . .++
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~ 122 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLA 122 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSC
T ss_pred cCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcC
Confidence 34579999999999999999887 46899999999999999987621 1 12234443 1 111
Q ss_pred ---chhHHHHHHHhhccCCCCcEEEecC
Q 006149 601 ---CLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 601 ---~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
...+.+.+.++| +++|.+....
T Consensus 123 ~~~~~~~l~~~~~~l---~~~G~l~~~~ 147 (195)
T 3cgg_A 123 EDGREPALANIHRAL---GADGRAVIGF 147 (195)
T ss_dssp HHHHHHHHHHHHHHE---EEEEEEEEEE
T ss_pred hHHHHHHHHHHHHHh---CCCCEEEEEe
Confidence 156788889999 9999887743
No 429
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=95.46 E-value=0.014 Score=61.03 Aligned_cols=73 Identities=12% Similarity=0.081 Sum_probs=54.7
Q ss_pred hhHHHHHHHHhhCCCCCCCCCeEEEECCCcchHHHHHHHc-C-CCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCC
Q 006149 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTS 127 (659)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~~s~~La~~-g-~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~ 127 (659)
.+.+...+.+++.. .++..++|..||+|..+..+++. + .+.|+|+|.++.+++.+ ++. ...+++++++++.+
T Consensus 42 ~pVLl~Evl~~L~i---~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A-~rL--~~~Rv~lv~~nF~~ 115 (347)
T 3tka_A 42 TTVLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVA-KTI--DDPRFSIIHGPFSA 115 (347)
T ss_dssp CCTTTHHHHHHTCC---CTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHH-TTC--CCTTEEEEESCGGG
T ss_pred ccccHHHHHHhhCC---CCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHH-Hhh--cCCcEEEEeCCHHH
Confidence 34455556666654 68899999999999999999876 3 46899999999999866 332 23567777776666
Q ss_pred C
Q 006149 128 M 128 (659)
Q Consensus 128 l 128 (659)
+
T Consensus 116 l 116 (347)
T 3tka_A 116 L 116 (347)
T ss_dssp H
T ss_pred H
Confidence 5
No 430
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=95.46 E-value=0.034 Score=55.73 Aligned_cols=80 Identities=15% Similarity=0.148 Sum_probs=61.0
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCC-----------------CCCeeEE-ec-
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQ-----------------DKSLKVF-NH- 598 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~-----------------d~rl~vf-~~- 598 (659)
...+||=||-|.|.+...+...+|+.+|++||+++..++.|++-. |+.. +...|+. ..
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a 159 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARA 159 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEES
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEECC
Confidence 457999999999999999999999999999999999999998764 4431 1223332 11
Q ss_pred c-cchhHHHHHHHhhccCCCCcEEEe
Q 006149 599 L-FCLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 599 l-~~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
+ --..+.+.+.++| +++|.++.
T Consensus 160 ~~~~~~ll~~~~~~L---kpgG~l~~ 182 (249)
T 3g89_A 160 VAPLCVLSELLLPFL---EVGGAAVA 182 (249)
T ss_dssp SCCHHHHHHHHGGGE---EEEEEEEE
T ss_pred cCCHHHHHHHHHHHc---CCCeEEEE
Confidence 1 1256778888999 99997654
No 431
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.45 E-value=0.061 Score=56.69 Aligned_cols=70 Identities=13% Similarity=0.109 Sum_probs=54.0
Q ss_pred CeEEEECCCcchHHHHHHHcC--CCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCC---CCCcccEEEeccc
Q 006149 70 PQILVPGCGNSRLSEHLYDAG--FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQF---MDETFDVILDKGG 143 (659)
Q Consensus 70 ~~ILDiGCG~G~~s~~La~~g--~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~---~~~sFDvVi~~g~ 143 (659)
.+|||+.||.|.++..+...| +..|.++|+++.+++..+.. .+...++++|+.++.. +...+|+|+....
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N----~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpP 77 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYN----FPHTQLLAKTIEGITLEEFDRLSFDMILMSPP 77 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHH----CTTSCEECSCGGGCCHHHHHHHCCSEEEECCC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHh----ccccccccCCHHHccHhHcCcCCcCEEEEcCC
Confidence 589999999999999999888 55799999999888755433 2455678899988742 2126899997554
No 432
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=95.45 E-value=0.031 Score=59.27 Aligned_cols=80 Identities=13% Similarity=0.089 Sum_probs=59.4
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC-------C-CCCCCeeEE------ecccc---h
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG-------F-TQDKSLKVF------NHLFC---L 602 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg-------l-~~d~rl~vf------~~l~~---~ 602 (659)
+...+||=||.|.|.+...+.+.+|.++++++|+ |.+++.|+++=+ + .+-+..|++ .++-. .
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~~~~~~D~v~~~~~lh~~~d~~~~ 286 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPLSGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCI 286 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECCTTTCCCCEEEEEEESSGGGSCHHHHH
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhcCCCEEEeCCcccCCCCCCEEEEecccccCCHHHHH
Confidence 3467999999999999999999999999999999 999999986310 0 011124444 22221 2
Q ss_pred hHHHHHHHhhccCCCCcEEEe
Q 006149 603 QLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 603 ~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
.+.+.++++| +|+|.+..
T Consensus 287 ~~l~~~~~~L---~pgG~l~i 304 (372)
T 1fp1_D 287 EFLSNCHKAL---SPNGKVII 304 (372)
T ss_dssp HHHHHHHHHE---EEEEEEEE
T ss_pred HHHHHHHHhc---CCCCEEEE
Confidence 7889999999 99996654
No 433
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=95.45 E-value=0.016 Score=58.11 Aligned_cols=44 Identities=20% Similarity=0.357 Sum_probs=40.2
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF 585 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F 585 (659)
...+||=||.|.|.++..+....+. +|++|||||.+++.|++.+
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~ 92 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSV 92 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHH
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHH
Confidence 4579999999999999999998776 9999999999999999876
No 434
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=95.45 E-value=0.033 Score=53.82 Aligned_cols=80 Identities=16% Similarity=0.225 Sum_probs=60.7
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC-----------CC-CCCCeeEE------eccc-c
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG-----------FT-QDKSLKVF------NHLF-C 601 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg-----------l~-~d~rl~vf------~~l~-~ 601 (659)
.+.+||-||.|.|.+...+... + .++++||+++.+++.|++.+. ++ ++...|+. .|+. .
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~~ 109 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLFDP 109 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTSSEEEESCTTTCCCCSCTTCEEEEEEESCGGGSSCH
T ss_pred CCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhCCcEEEcchhhcCCCCCCCccCEEEECChhhhcCCH
Confidence 4579999999999999999988 5 799999999999999997641 11 12344543 3332 3
Q ss_pred hhHHHHHHHhhccCCCCcEEEecC
Q 006149 602 LQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 602 ~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
..+.+.+.++| +++|.+....
T Consensus 110 ~~~l~~~~~~L---~~gG~l~~~~ 130 (230)
T 3cc8_A 110 WAVIEKVKPYI---KQNGVILASI 130 (230)
T ss_dssp HHHHHHTGGGE---EEEEEEEEEE
T ss_pred HHHHHHHHHHc---CCCCEEEEEe
Confidence 56788899999 9999877643
No 435
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=95.45 E-value=0.021 Score=56.45 Aligned_cols=79 Identities=19% Similarity=0.278 Sum_probs=59.8
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCC--------------CCCCeeEE------
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFT--------------QDKSLKVF------ 596 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~--------------~d~rl~vf------ 596 (659)
....+||-||.|.|.+...+....+ ++++||+++.+++.|++.+ +++ ++...|+.
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l 97 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYAA 97 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESCG
T ss_pred CCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCch
Confidence 4457999999999999999998874 8999999999999998865 221 12233433
Q ss_pred ecc-cchhHHHHHHHhhccCCCCcEEEe
Q 006149 597 NHL-FCLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 597 ~~l-~~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
.|+ ....+...++++| +|+|.+..
T Consensus 98 ~~~~~~~~~l~~~~~~L---kpgG~l~~ 122 (239)
T 1xxl_A 98 HHFSDVRKAVREVARVL---KQDGRFLL 122 (239)
T ss_dssp GGCSCHHHHHHHHHHHE---EEEEEEEE
T ss_pred hhccCHHHHHHHHHHHc---CCCcEEEE
Confidence 222 2357788999999 99997765
No 436
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=95.43 E-value=0.036 Score=58.25 Aligned_cols=80 Identities=11% Similarity=0.131 Sum_probs=59.7
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC-------C-CCCCCeeEE------eccc---ch
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG-------F-TQDKSLKVF------NHLF---CL 602 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg-------l-~~d~rl~vf------~~l~---~~ 602 (659)
+...+||-||.|.|.+...+.+.+|+.+++++|+ |.+++.|+++=+ + .+-+..|++ .++- ..
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~~~p~~D~v~~~~~lh~~~d~~~~ 265 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCL 265 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCBTTEEEEECCTTTCCCCCSEEEEESCGGGSCHHHHH
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccCCCcEEEeccccCCCCCccEEEeehhhccCCHHHHH
Confidence 3457999999999999999999999999999999 999999986311 0 011124444 2222 12
Q ss_pred hHHHHHHHhhccCCC---CcEEEe
Q 006149 603 QLEEDVNLVLFGLSS---ESCIKD 623 (659)
Q Consensus 603 ~f~~~~~~~Lf~~~~---~g~~~~ 623 (659)
.+.+.++++| +| +|.+..
T Consensus 266 ~~l~~~~~~L---~p~~~gG~l~i 286 (352)
T 1fp2_A 266 RILKKCKEAV---TNDGKRGKVTI 286 (352)
T ss_dssp HHHHHHHHHH---SGGGCCCEEEE
T ss_pred HHHHHHHHhC---CCCCCCcEEEE
Confidence 7888999999 99 996544
No 437
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=95.42 E-value=0.066 Score=56.62 Aligned_cols=79 Identities=11% Similarity=0.095 Sum_probs=60.2
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC---CC-----------CC-----CCeeEE--ec-
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG---FT-----------QD-----KSLKVF--NH- 598 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg---l~-----------~d-----~rl~vf--~~- 598 (659)
.+.+||=||.|.|.+...+.+.+|..+++++|+ |.+++.|++.+. +. ++ ...|++ .+
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~v 257 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQF 257 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEESC
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEech
Confidence 467999999999999999999999999999999 999999998742 10 10 133443 11
Q ss_pred ---cc---chhHHHHHHHhhccCCCCcEEEe
Q 006149 599 ---LF---CLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 599 ---l~---~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
+. ...+.+.++++| +|+|.+..
T Consensus 258 lh~~~~~~~~~~l~~~~~~L---~pgG~l~i 285 (363)
T 3dp7_A 258 LDCFSEEEVISILTRVAQSI---GKDSKVYI 285 (363)
T ss_dssp STTSCHHHHHHHHHHHHHHC---CTTCEEEE
T ss_pred hhhCCHHHHHHHHHHHHHhc---CCCcEEEE
Confidence 21 236788899999 99996654
No 438
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=95.41 E-value=0.035 Score=54.16 Aligned_cols=44 Identities=18% Similarity=0.316 Sum_probs=39.4
Q ss_pred CCCeEEEEccC-cchHHHHHHhhCCCccEEEEecChhHHHHHHhhc
Q 006149 541 KSVKAVVIGLG-AGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF 585 (659)
Q Consensus 541 ~~~~vLiiGlG-gG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F 585 (659)
...+||=||.| .|.+...+.... ..++++||+||.+++.|++.+
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~ 99 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNI 99 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHH
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHH
Confidence 45799999999 999999999886 579999999999999999764
No 439
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=95.40 E-value=0.057 Score=56.10 Aligned_cols=77 Identities=16% Similarity=0.146 Sum_probs=58.7
Q ss_pred CeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC---CC-------------CCCCeeEE--ec----cc
Q 006149 543 VKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG---FT-------------QDKSLKVF--NH----LF 600 (659)
Q Consensus 543 ~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg---l~-------------~d~rl~vf--~~----l~ 600 (659)
.+||=||.|.|.+...+...+|..+++++|+ |.+++.|++.+. +. .....|++ .+ +.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~~~~ 247 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDIYLLSRIIGDLD 247 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTCCCSSCSEEEEESCGGGCC
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCCCCCCCCEEEEchhccCCC
Confidence 7999999999999999999999999999999 999999988641 10 01123443 11 21
Q ss_pred ---chhHHHHHHHhhccCCCCcEEEe
Q 006149 601 ---CLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 601 ---~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
...+.+.++++| +|+|.+..
T Consensus 248 ~~~~~~~l~~~~~~L---~pgG~l~i 270 (334)
T 2ip2_A 248 EAASLRLLGNCREAM---AGDGRVVV 270 (334)
T ss_dssp HHHHHHHHHHHHHHS---CTTCEEEE
T ss_pred HHHHHHHHHHHHHhc---CCCCEEEE
Confidence 227788899999 99996654
No 440
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=95.40 E-value=0.035 Score=59.31 Aligned_cols=79 Identities=16% Similarity=0.235 Sum_probs=56.3
Q ss_pred CCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCC--------------CCCeeEE-e-----c
Q 006149 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQ--------------DKSLKVF-N-----H 598 (659)
Q Consensus 542 ~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~--------------d~rl~vf-~-----~ 598 (659)
.+.||-||-|.|.|+++..+.... +|.+||.++ +++.|++.. |+.+ .++.|+. . .
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~aGA~-~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~~~ 161 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQAGAR-RVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGYG 161 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCS-EEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCBTT
T ss_pred CCEEEEeCCCccHHHHHHHHhCCC-EEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeeccccc
Confidence 368999999999999999987654 899999997 678888764 3321 1244554 1 1
Q ss_pred cc----chhHHHHHHHhhccCCCCcEEEecC
Q 006149 599 LF----CLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 599 l~----~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
|. -..+.....+.| +|+|++..+.
T Consensus 162 l~~e~~l~~~l~a~~r~L---kp~G~~iP~~ 189 (376)
T 4hc4_A 162 LLHESMLSSVLHARTKWL---KEGGLLLPAS 189 (376)
T ss_dssp BTTTCSHHHHHHHHHHHE---EEEEEEESCE
T ss_pred ccccchhhhHHHHHHhhC---CCCceECCcc
Confidence 22 234455567888 9999988765
No 441
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=95.40 E-value=0.018 Score=56.87 Aligned_cols=80 Identities=11% Similarity=0.039 Sum_probs=57.5
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecC-hhHHHHH---Hhhc---CCCC------C-CCe-----eEEecc--
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELD-LTMLNLA---EDYF---GFTQ------D-KSL-----KVFNHL-- 599 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiD-p~V~~vA---~~~F---gl~~------d-~rl-----~vf~~l-- 599 (659)
...+||=||-|.|.+...+....|+.++++||++ +.|+++| ++-. +++. | ..+ +++..+
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~ 103 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISI 103 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEE
Confidence 3468999999999999999988899999999999 8888888 5432 2220 0 000 222111
Q ss_pred -------------cchhHHHHHHHhhccCCCCcEEEe
Q 006149 600 -------------FCLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 600 -------------~~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
...+++..++++| +|+|.+..
T Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~~r~L---kpGG~l~i 137 (225)
T 3p2e_A 104 LFPWGTLLEYVIKPNRDILSNVADLA---KKEAHFEF 137 (225)
T ss_dssp ESCCHHHHHHHHTTCHHHHHHHHTTE---EEEEEEEE
T ss_pred eCCCcHHhhhhhcchHHHHHHHHHhc---CCCcEEEE
Confidence 1245788999999 99998876
No 442
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=95.38 E-value=0.031 Score=59.67 Aligned_cols=81 Identities=19% Similarity=0.206 Sum_probs=61.7
Q ss_pred CCCeEEEEccCcchHHHHHHhhC-CCccEEEEecChhHHHHHHhhc--------C-C---------------------C-
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYF--------G-F---------------------T- 588 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~-p~~~i~~VEiDp~V~~vA~~~F--------g-l---------------------~- 588 (659)
...+||=||.|.|.++..|...+ |..++++||++|.+++.|++.+ | + +
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 45799999999999999998876 7889999999999999999864 2 1 0
Q ss_pred CCCCeeEE------ecc-cchhHHHHHHHhhccCCCCcEEEec
Q 006149 589 QDKSLKVF------NHL-FCLQLEEDVNLVLFGLSSESCIKDN 624 (659)
Q Consensus 589 ~d~rl~vf------~~l-~~~~f~~~~~~~Lf~~~~~g~~~~n 624 (659)
++...|+. .++ ....+.+.+.++| +|+|.+...
T Consensus 163 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~L---kpgG~l~i~ 202 (383)
T 4fsd_A 163 PDSSVDIVISNCVCNLSTNKLALFKEIHRVL---RDGGELYFS 202 (383)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHE---EEEEEEEEE
T ss_pred CCCCEEEEEEccchhcCCCHHHHHHHHHHHc---CCCCEEEEE
Confidence 11234433 122 2356889999999 999987763
No 443
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=95.36 E-value=0.015 Score=57.91 Aligned_cols=81 Identities=10% Similarity=0.050 Sum_probs=57.4
Q ss_pred CCeEEEEccCcchHHHHHHhh----CCCccEEEEecChhHHHHHHhhcC-------CCCC----C-----CeeEE----e
Q 006149 542 SVKAVVIGLGAGLLPMFLHEC----MPFVGIEAVELDLTMLNLAEDYFG-------FTQD----K-----SLKVF----N 597 (659)
Q Consensus 542 ~~~vLiiGlGgG~l~~~l~~~----~p~~~i~~VEiDp~V~~vA~~~Fg-------l~~d----~-----rl~vf----~ 597 (659)
+.+||-||.|.|.++..|.+. .|..+|++||++|.++++|+..-. -..+ + ..|+. .
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~ 161 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDNA 161 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEESS
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECCc
Confidence 479999999999999998887 688899999999999999874310 0001 0 12221 1
Q ss_pred cccchhHHHHHHH-hhccCCCCcEEEecC
Q 006149 598 HLFCLQLEEDVNL-VLFGLSSESCIKDNS 625 (659)
Q Consensus 598 ~l~~~~f~~~~~~-~Lf~~~~~g~~~~n~ 625 (659)
|.....++..+.+ +| +++|.++...
T Consensus 162 ~~~~~~~l~~~~r~~L---kpGG~lv~~d 187 (236)
T 2bm8_A 162 HANTFNIMKWAVDHLL---EEGDYFIIED 187 (236)
T ss_dssp CSSHHHHHHHHHHHTC---CTTCEEEECS
T ss_pred hHhHHHHHHHHHHhhC---CCCCEEEEEe
Confidence 2223556777776 89 9999998853
No 444
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=95.35 E-value=0.022 Score=52.78 Aligned_cols=81 Identities=17% Similarity=0.260 Sum_probs=60.9
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCC---------CCCCeeEE------ecc-cchh
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT---------QDKSLKVF------NHL-FCLQ 603 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~---------~d~rl~vf------~~l-~~~~ 603 (659)
....+||-||.|.|.+...+..... ++++||+++.+++.|++...-. ++...|+. .|+ ....
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~v~~~~~d~~~~~~~~D~v~~~~~l~~~~~~~~ 93 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEKFDSVITLSDPKEIPDNSVDFILFANSFHDMDDKQH 93 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHHCTTSEEESSGGGSCTTCEEEEEEESCSTTCSCHHH
T ss_pred CCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHhCCCcEEEeCCCCCCCCceEEEEEccchhcccCHHH
Confidence 3456999999999999999998873 9999999999999999872100 12334443 233 2357
Q ss_pred HHHHHHHhhccCCCCcEEEecC
Q 006149 604 LEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 604 f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
+.+.+.++| +++|.+....
T Consensus 94 ~l~~~~~~L---~pgG~l~~~~ 112 (170)
T 3i9f_A 94 VISEVKRIL---KDDGRVIIID 112 (170)
T ss_dssp HHHHHHHHE---EEEEEEEEEE
T ss_pred HHHHHHHhc---CCCCEEEEEE
Confidence 788999999 9999887643
No 445
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=95.34 E-value=0.033 Score=59.20 Aligned_cols=80 Identities=15% Similarity=0.189 Sum_probs=58.6
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCC--------CCCCCeeEE--e----ccc---ch
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF--------TQDKSLKVF--N----HLF---CL 602 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl--------~~d~rl~vf--~----~l~---~~ 602 (659)
....+||=||.|.|.+...|.+.+|+++++++|+ |.|++.|++.-++ .+-+.-|++ . ++. ..
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~~~p~~D~v~~~~vlh~~~~~~~~ 280 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAFSGVEHLGGDMFDGVPKGDAIFIKWICHDWSDEHCL 280 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECCTTTCCCCCSEEEEESCGGGBCHHHHH
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhcCCCEEEecCCCCCCCCCCEEEEechhhcCCHHHHH
Confidence 3457999999999999999999999999999999 9999998764100 000111444 1 221 23
Q ss_pred hHHHHHHHhhccCCCCcEEEe
Q 006149 603 QLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 603 ~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
.+.+.++++| +|+|.+..
T Consensus 281 ~~l~~~~~~L---~pgG~l~i 298 (368)
T 3reo_A 281 KLLKNCYAAL---PDHGKVIV 298 (368)
T ss_dssp HHHHHHHHHS---CTTCEEEE
T ss_pred HHHHHHHHHc---CCCCEEEE
Confidence 6788899999 99996654
No 446
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=95.32 E-value=0.02 Score=55.92 Aligned_cols=45 Identities=7% Similarity=0.125 Sum_probs=40.9
Q ss_pred CCCeEEEEccCcchHHHHHHhhCC-CccEEEEecChhHHHHHHhhc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF 585 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p-~~~i~~VEiDp~V~~vA~~~F 585 (659)
.+.+||-||.|.|.++.++.+.++ ..+|++||++|.++++|++.+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~ 103 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQML 103 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHH
Confidence 457999999999999999998765 789999999999999999975
No 447
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=95.31 E-value=0.019 Score=56.21 Aligned_cols=82 Identities=10% Similarity=0.109 Sum_probs=58.1
Q ss_pred CCeEEEEccCcchHHHHHHhhCC------CccEEEEecChhHHHHHHhhcC----------------------CCCCCCe
Q 006149 542 SVKAVVIGLGAGLLPMFLHECMP------FVGIEAVELDLTMLNLAEDYFG----------------------FTQDKSL 593 (659)
Q Consensus 542 ~~~vLiiGlGgG~l~~~l~~~~p------~~~i~~VEiDp~V~~vA~~~Fg----------------------l~~d~rl 593 (659)
..+||-||.|.|.+...+.+..+ ..++++||++|.+++.|++.+. +++....
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 164 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAPY 164 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGGCSE
T ss_pred CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCcCCCc
Confidence 46899999999999999888654 3589999999999999987642 1111223
Q ss_pred eEE-ecccchhHHHHHHHhhccCCCCcEEEecCc
Q 006149 594 KVF-NHLFCLQLEEDVNLVLFGLSSESCIKDNSF 626 (659)
Q Consensus 594 ~vf-~~l~~~~f~~~~~~~Lf~~~~~g~~~~n~~ 626 (659)
|+. .......+.+.+.+.| +++|.++....
T Consensus 165 D~I~~~~~~~~~~~~~~~~L---kpgG~lvi~~~ 195 (227)
T 1r18_A 165 NAIHVGAAAPDTPTELINQL---ASGGRLIVPVG 195 (227)
T ss_dssp EEEEECSCBSSCCHHHHHTE---EEEEEEEEEES
T ss_pred cEEEECCchHHHHHHHHHHh---cCCCEEEEEEe
Confidence 332 1111233447788899 99998887664
No 448
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=95.30 E-value=0.018 Score=54.15 Aligned_cols=43 Identities=16% Similarity=0.124 Sum_probs=38.8
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF 585 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F 585 (659)
...+||=||.|.|.+..++... ..+|++||++|.+++.|++.+
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~ 64 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRL 64 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHH
Confidence 3468999999999999999987 579999999999999999876
No 449
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=95.30 E-value=0.031 Score=56.19 Aligned_cols=44 Identities=7% Similarity=-0.068 Sum_probs=38.5
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG 586 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg 586 (659)
...+||.+|-|.|.+..+|... +.+|++||++|.+++.|++-.+
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~ 111 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQN 111 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTT
T ss_pred CCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcc
Confidence 4579999999999999999987 3589999999999999987654
No 450
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=95.24 E-value=0.025 Score=57.84 Aligned_cols=43 Identities=14% Similarity=0.170 Sum_probs=37.4
Q ss_pred CCCeEEEEccCcch----HHHHHHhhCC----CccEEEEecChhHHHHHHh
Q 006149 541 KSVKAVVIGLGAGL----LPMFLHECMP----FVGIEAVELDLTMLNLAED 583 (659)
Q Consensus 541 ~~~~vLiiGlGgG~----l~~~l~~~~p----~~~i~~VEiDp~V~~vA~~ 583 (659)
.+.+|+.+|.|.|. +++.|...+| +.+|+++|||+.+++.|++
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~ 155 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARS 155 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHH
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHh
Confidence 35799999999997 8888888755 4689999999999999986
No 451
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=95.18 E-value=0.028 Score=55.03 Aligned_cols=82 Identities=18% Similarity=0.111 Sum_probs=60.4
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC-----C----------CCCCCeeEE-------ec
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG-----F----------TQDKSLKVF-------NH 598 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg-----l----------~~d~rl~vf-------~~ 598 (659)
.+.+||-||.|.|.+...+.... .++++||+++.+++.|++.+. + +.....|+. .|
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~--~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~ 114 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKF--KNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLITCCLDSTNY 114 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGS--SEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEEEEEECTTGGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHCC--CcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCccCCceEEEEcCccccc
Confidence 55799999999999999998874 589999999999999998752 1 011233332 23
Q ss_pred cc----chhHHHHHHHhhccCCCCcEEEecCch
Q 006149 599 LF----CLQLEEDVNLVLFGLSSESCIKDNSFP 627 (659)
Q Consensus 599 l~----~~~f~~~~~~~Lf~~~~~g~~~~n~~~ 627 (659)
+. ...+.+.++++| +|+|.++.....
T Consensus 115 ~~~~~~~~~~l~~~~~~L---~pgG~l~~~~~~ 144 (246)
T 1y8c_A 115 IIDSDDLKKYFKAVSNHL---KEGGVFIFDINS 144 (246)
T ss_dssp CCSHHHHHHHHHHHHTTE---EEEEEEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHhc---CCCcEEEEEecC
Confidence 31 245677888899 999998876543
No 452
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=95.17 E-value=0.07 Score=52.34 Aligned_cols=80 Identities=14% Similarity=0.092 Sum_probs=60.0
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCC----------CC--------CCeeEE-ecccc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT----------QD--------KSLKVF-NHLFC 601 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~----------~d--------~rl~vf-~~l~~ 601 (659)
...+||-||.|.|.+..++...+|..+|++||++|.+++.|++..... .+ ...|+. .++..
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~~ 153 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYEDVAQ 153 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEECCCS
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEEecCC
Confidence 346899999999999999999988779999999999999887654211 11 123442 33322
Q ss_pred ----hhHHHHHHHhhccCCCCcEEEe
Q 006149 602 ----LQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 602 ----~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
..+.+.+.++| +|+|.+..
T Consensus 154 ~~~~~~~l~~~~~~L---kpgG~l~i 176 (230)
T 1fbn_A 154 PNQAEILIKNAKWFL---KKGGYGMI 176 (230)
T ss_dssp TTHHHHHHHHHHHHE---EEEEEEEE
T ss_pred hhHHHHHHHHHHHhC---CCCcEEEE
Confidence 45688888999 99998776
No 453
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=95.12 E-value=0.033 Score=54.54 Aligned_cols=80 Identities=18% Similarity=0.202 Sum_probs=58.7
Q ss_pred CCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCC---------------CCCCCeeEE-------ecc
Q 006149 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF---------------TQDKSLKVF-------NHL 599 (659)
Q Consensus 542 ~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl---------------~~d~rl~vf-------~~l 599 (659)
..+||-||.|.|.+...+... .++++||++|.+++.|++.+.- +.....|+. .|+
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~~~~~ 110 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPVDAITILCDSLNYL 110 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCEEEEEECTTGGGGC
T ss_pred CCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCcCEEEEeCCchhhc
Confidence 379999999999999998877 5999999999999999987521 011223332 222
Q ss_pred c----chhHHHHHHHhhccCCCCcEEEecCch
Q 006149 600 F----CLQLEEDVNLVLFGLSSESCIKDNSFP 627 (659)
Q Consensus 600 ~----~~~f~~~~~~~Lf~~~~~g~~~~n~~~ 627 (659)
. ...+.+.+.++| +|+|.++.....
T Consensus 111 ~~~~~~~~~l~~~~~~L---~pgG~l~~~~~~ 139 (243)
T 3d2l_A 111 QTEADVKQTFDSAARLL---TDGGKLLFDVHS 139 (243)
T ss_dssp CSHHHHHHHHHHHHHHE---EEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHhc---CCCeEEEEEcCC
Confidence 1 235677888999 999998876543
No 454
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=95.09 E-value=0.05 Score=56.81 Aligned_cols=82 Identities=12% Similarity=0.070 Sum_probs=59.8
Q ss_pred CCCeEEEEccCcchHHHHHHhh-CCCccEEEEecChhHHHHHHhhcC-------------CCC-------C---------
Q 006149 541 KSVKAVVIGLGAGLLPMFLHEC-MPFVGIEAVELDLTMLNLAEDYFG-------------FTQ-------D--------- 590 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~-~p~~~i~~VEiDp~V~~vA~~~Fg-------------l~~-------d--------- 590 (659)
...+||-||.|.|.++..+.+. .|..++++||++|.+++.|++.+. +.. |
T Consensus 105 ~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~ 184 (336)
T 2b25_A 105 PGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIK 184 (336)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC----
T ss_pred CCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccC
Confidence 3468999999999999999987 577899999999999999998653 000 0
Q ss_pred -CCeeE-Eecc-cchhHHHHHHHhhccCCCCcEEEecC
Q 006149 591 -KSLKV-FNHL-FCLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 591 -~rl~v-f~~l-~~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
...|+ +.++ ....+.+.+.++| +|+|.++.-.
T Consensus 185 ~~~fD~V~~~~~~~~~~l~~~~~~L---kpgG~lv~~~ 219 (336)
T 2b25_A 185 SLTFDAVALDMLNPHVTLPVFYPHL---KHGGVCAVYV 219 (336)
T ss_dssp ---EEEEEECSSSTTTTHHHHGGGE---EEEEEEEEEE
T ss_pred CCCeeEEEECCCCHHHHHHHHHHhc---CCCcEEEEEe
Confidence 11222 1222 2345788899999 9999887633
No 455
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=95.08 E-value=0.049 Score=51.51 Aligned_cols=44 Identities=14% Similarity=0.060 Sum_probs=37.7
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF 585 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F 585 (659)
...+||=||.|.|.+...+... +..+|++||+||.+++.|++.+
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~ 87 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNI 87 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHH
Confidence 3468999999999999977664 4458999999999999999875
No 456
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=95.07 E-value=0.038 Score=58.07 Aligned_cols=80 Identities=14% Similarity=0.217 Sum_probs=59.5
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCC----------C---CCeeEE--e----
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQ----------D---KSLKVF--N---- 597 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~----------d---~rl~vf--~---- 597 (659)
....+||-||.|.|.+...+...+|+++++++|+ |.+++.|++.+ ++.. + ...|++ .
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~ 260 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAIILSFVLL 260 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSSCEEEEEEESCGG
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCCCccEEEEccccc
Confidence 3457999999999999999999999999999999 99999999864 2210 0 113433 1
Q ss_pred cccc---hhHHHHHHHhhccCCCCcEEEe
Q 006149 598 HLFC---LQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 598 ~l~~---~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
++-. ..+.+.+.++| +|+|.+..
T Consensus 261 ~~~~~~~~~~l~~~~~~L---~pgG~l~i 286 (360)
T 1tw3_A 261 NWPDHDAVRILTRCAEAL---EPGGRILI 286 (360)
T ss_dssp GSCHHHHHHHHHHHHHTE---EEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhc---CCCcEEEE
Confidence 2211 36888999999 99996543
No 457
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=95.03 E-value=0.058 Score=52.73 Aligned_cols=81 Identities=20% Similarity=0.139 Sum_probs=60.8
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCC--------------CCCCeeEE------ecc-
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT--------------QDKSLKVF------NHL- 599 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~--------------~d~rl~vf------~~l- 599 (659)
...+||-||.|.|.+...+..... .++++||+++.+++.|++.+.-. ++...|+. .|+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 121 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYVE 121 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCGGGCS
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEeccccccc
Confidence 457999999999999999988743 38999999999999999876421 12223433 223
Q ss_pred cchhHHHHHHHhhccCCCCcEEEecC
Q 006149 600 FCLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 600 ~~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
....+.+.+.++| +++|.++...
T Consensus 122 ~~~~~l~~~~~~L---~pgG~l~~~~ 144 (243)
T 3bkw_A 122 DVARLFRTVHQAL---SPGGHFVFST 144 (243)
T ss_dssp CHHHHHHHHHHHE---EEEEEEEEEE
T ss_pred hHHHHHHHHHHhc---CcCcEEEEEe
Confidence 2356788999999 9999887654
No 458
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=95.01 E-value=0.045 Score=53.52 Aligned_cols=77 Identities=9% Similarity=0.033 Sum_probs=58.7
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC------------CC-C-CCCeeEE-ecccchhHH
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG------------FT-Q-DKSLKVF-NHLFCLQLE 605 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg------------l~-~-d~rl~vf-~~l~~~~f~ 605 (659)
...+||-||.|.|.+...+... ..++++||++|.+++.|++.+. ++ + +...|+. .......+.
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~~~~~l 125 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRRGPTSVI 125 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEESCCSGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCCCHHHHH
Confidence 4579999999999999999988 4699999999999999998731 00 0 2233433 223356677
Q ss_pred HHHHHhhccCCCCcEEE
Q 006149 606 EDVNLVLFGLSSESCIK 622 (659)
Q Consensus 606 ~~~~~~Lf~~~~~g~~~ 622 (659)
..+.++| +|+|.++
T Consensus 126 ~~~~~~L---kpgG~l~ 139 (226)
T 3m33_A 126 LRLPELA---APDAHFL 139 (226)
T ss_dssp GGHHHHE---EEEEEEE
T ss_pred HHHHHHc---CCCcEEE
Confidence 8899999 9999887
No 459
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=95.00 E-value=0.099 Score=51.56 Aligned_cols=80 Identities=15% Similarity=0.166 Sum_probs=58.4
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC---C------------CCCCCeeEEe------cc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG---F------------TQDKSLKVFN------HL 599 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg---l------------~~d~rl~vf~------~l 599 (659)
.+.+||-||.|.|.+...+... +.++++||++|.+++.|++.+. + +.....|+.- +.
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~~ 118 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEFDAVTMFFSTIMY 118 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCEEEEEECSSGGGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCccEEEEcCCchhc
Confidence 4579999999999999999886 4689999999999999997652 1 1112334331 11
Q ss_pred c----chhHHHHHHHhhccCCCCcEEEecC
Q 006149 600 F----CLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 600 ~----~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
+ ...+.+.+.++| +|+|.++...
T Consensus 119 ~~~~~~~~~l~~~~~~L---~pgG~li~~~ 145 (252)
T 1wzn_A 119 FDEEDLRKLFSKVAEAL---KPGGVFITDF 145 (252)
T ss_dssp SCHHHHHHHHHHHHHHE---EEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHc---CCCeEEEEec
Confidence 1 245677888999 9999887643
No 460
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=94.98 E-value=0.054 Score=51.75 Aligned_cols=82 Identities=17% Similarity=0.147 Sum_probs=57.3
Q ss_pred CCCCeEEEEccCcchH-HHHHHhhCCCccEEEEecChhHHHHHHhhcC---------------CC-CCCCeeEE------
Q 006149 540 GKSVKAVVIGLGAGLL-PMFLHECMPFVGIEAVELDLTMLNLAEDYFG---------------FT-QDKSLKVF------ 596 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l-~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg---------------l~-~d~rl~vf------ 596 (659)
+.+.+||-||.|.|.+ ...+.. ++.++++||+++.+++.|++.+. ++ ++...|+.
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 99 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVE--DGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTI 99 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHH--TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCG
T ss_pred CCCCEEEEECCCCCHHHHHHHHh--CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChH
Confidence 3457999999999987 445544 35699999999999999998741 11 12234433
Q ss_pred ecc---cchhHHHHHHHhhccCCCCcEEEecCc
Q 006149 597 NHL---FCLQLEEDVNLVLFGLSSESCIKDNSF 626 (659)
Q Consensus 597 ~~l---~~~~f~~~~~~~Lf~~~~~g~~~~n~~ 626 (659)
.|+ ....+.+.+.++| +|+|.++...+
T Consensus 100 ~~~~~~~~~~~l~~~~~~L---kpgG~l~~~~~ 129 (209)
T 2p8j_A 100 FHMRKNDVKEAIDEIKRVL---KPGGLACINFL 129 (209)
T ss_dssp GGSCHHHHHHHHHHHHHHE---EEEEEEEEEEE
T ss_pred HhCCHHHHHHHHHHHHHHc---CCCcEEEEEEe
Confidence 233 1346677889999 99998877553
No 461
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=94.95 E-value=0.042 Score=57.71 Aligned_cols=92 Identities=17% Similarity=0.235 Sum_probs=65.3
Q ss_pred CCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCC-----------CCCCeeEE--eccc-----
Q 006149 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFT-----------QDKSLKVF--NHLF----- 600 (659)
Q Consensus 542 ~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~-----------~d~rl~vf--~~l~----- 600 (659)
..+||-||.|.|.+...+....|..++++||+++.+++.|++.+ ++. .+...|+. ...+
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~fD~Iv~~~~~~~g~~ 276 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRFDMIISNPPFHDGMQ 276 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCSCEEEEEECCCCCSSSH
T ss_pred CCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccCCeeEEEECCCcccCcc
Confidence 46899999999999999999999889999999999999999875 221 02233433 1111
Q ss_pred -----chhHHHHHHHhhccCCCCcEEEe--cCchHHHHHHHhh
Q 006149 601 -----CLQLEEDVNLVLFGLSSESCIKD--NSFPEAAVQLGKL 636 (659)
Q Consensus 601 -----~~~f~~~~~~~Lf~~~~~g~~~~--n~~~~~~~~l~~~ 636 (659)
...+.+.+.++| +|+|.+.. |.+......+.+.
T Consensus 277 ~~~~~~~~~l~~~~~~L---kpgG~l~i~~~~~~~~~~~l~~~ 316 (343)
T 2pjd_A 277 TSLDAAQTLIRGAVRHL---NSGGELRIVANAFLPYPDVLDET 316 (343)
T ss_dssp HHHHHHHHHHHHHGGGE---EEEEEEEEEEETTSSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhC---CCCcEEEEEEcCCCCcHHHHHHh
Confidence 256788899999 99996644 5543333333433
No 462
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=94.94 E-value=0.034 Score=59.77 Aligned_cols=79 Identities=18% Similarity=0.211 Sum_probs=61.6
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCCC----------------CCCeeEE------ec
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ----------------DKSLKVF------NH 598 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~~----------------d~rl~vf------~~ 598 (659)
...+||-||.|.|.+...+.... .++++||+++.+++.|++. +++. +...|+. +|
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~g--~~v~gvD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h 183 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEAG--VRHLGFEPSSGVAAKAREK-GIRVRTDFFEKATADDVRRTEGPANVIYAANTLCH 183 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHTT--CEEEEECCCHHHHHHHHTT-TCCEECSCCSHHHHHHHHHHHCCEEEEEEESCGGG
T ss_pred CCCEEEEecCCCCHHHHHHHHcC--CcEEEECCCHHHHHHHHHc-CCCcceeeechhhHhhcccCCCCEEEEEECChHHh
Confidence 45699999999999999998864 4899999999999999987 3331 1233433 44
Q ss_pred c-cchhHHHHHHHhhccCCCCcEEEecC
Q 006149 599 L-FCLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 599 l-~~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
+ .-..+.+.++++| +|+|++....
T Consensus 184 ~~d~~~~l~~~~r~L---kpgG~l~i~~ 208 (416)
T 4e2x_A 184 IPYVQSVLEGVDALL---APDGVFVFED 208 (416)
T ss_dssp CTTHHHHHHHHHHHE---EEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHc---CCCeEEEEEe
Confidence 4 3568899999999 9999887754
No 463
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=94.88 E-value=0.08 Score=56.09 Aligned_cols=77 Identities=14% Similarity=0.151 Sum_probs=58.8
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhh----------cC-CCCCCCeeEE--ec----cc--
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDY----------FG-FTQDKSLKVF--NH----LF-- 600 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~----------Fg-l~~d~rl~vf--~~----l~-- 600 (659)
....+||=||.|.|.+...|.+.+|+++++++|+ |.|++.|++. |. +++ . |++ .+ +-
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~D~~~~~p~--~-D~v~~~~vlh~~~d~ 275 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQFPGVTHVGGDMFKEVPS--G-DTILMKWILHDWSDQ 275 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECCTTTCCCC--C-SEEEEESCGGGSCHH
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhcCCeEEEeCCcCCCCCC--C-CEEEehHHhccCCHH
Confidence 3457999999999999999999999999999999 9999998864 21 111 1 444 22 21
Q ss_pred -chhHHHHHHHhhccCCCCcEEEe
Q 006149 601 -CLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 601 -~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
...+.+.++++| +|+|.+..
T Consensus 276 ~~~~~L~~~~~~L---~pgG~l~i 296 (364)
T 3p9c_A 276 HCATLLKNCYDAL---PAHGKVVL 296 (364)
T ss_dssp HHHHHHHHHHHHS---CTTCEEEE
T ss_pred HHHHHHHHHHHHc---CCCCEEEE
Confidence 236788899999 99996654
No 464
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=94.80 E-value=0.049 Score=55.14 Aligned_cols=78 Identities=8% Similarity=0.060 Sum_probs=58.6
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC---C------------CCCCCeeEE------ecc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG---F------------TQDKSLKVF------NHL 599 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg---l------------~~d~rl~vf------~~l 599 (659)
.+.+||-||.|.|.+...+... +.++++||+++.+++.|++.+. + +.+...|+. .|+
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~i~~~~~~~~~ 197 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENYDFIVSTVVFMFL 197 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSCEEEEEECSSGGGS
T ss_pred CCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCCccEEEEccchhhC
Confidence 4579999999999999999987 4599999999999999998752 1 112334433 233
Q ss_pred c---chhHHHHHHHhhccCCCCcEEEe
Q 006149 600 F---CLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 600 ~---~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
. ...+.+.+.++| +++|.+..
T Consensus 198 ~~~~~~~~l~~~~~~L---kpgG~l~i 221 (286)
T 3m70_A 198 NRERVPSIIKNMKEHT---NVGGYNLI 221 (286)
T ss_dssp CGGGHHHHHHHHHHTE---EEEEEEEE
T ss_pred CHHHHHHHHHHHHHhc---CCCcEEEE
Confidence 2 236888899999 99997554
No 465
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=94.80 E-value=0.058 Score=53.98 Aligned_cols=78 Identities=21% Similarity=0.144 Sum_probs=57.8
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCC----------C-CCCCeeEE------ecc-cc
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF----------T-QDKSLKVF------NHL-FC 601 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl----------~-~d~rl~vf------~~l-~~ 601 (659)
..+.+||=||.|.|.+...+.. +..++++||++|.+++.|++...+ + ++...|+. .|+ ..
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~ 110 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVISILAIHHFSHL 110 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEEEESCGGGCSSH
T ss_pred CCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEEEEcchHhhccCH
Confidence 4567999999999999999987 668999999999999998775311 1 12334433 233 24
Q ss_pred hhHHHHHHHhhccCCCCcEEEe
Q 006149 602 LQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 602 ~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
..+.+.++++| + +|.+..
T Consensus 111 ~~~l~~~~~~L---k-gG~~~~ 128 (261)
T 3ege_A 111 EKSFQEMQRII---R-DGTIVL 128 (261)
T ss_dssp HHHHHHHHHHB---C-SSCEEE
T ss_pred HHHHHHHHHHh---C-CcEEEE
Confidence 67888999999 9 994433
No 466
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=94.79 E-value=0.048 Score=56.15 Aligned_cols=84 Identities=8% Similarity=0.109 Sum_probs=61.2
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC-----------------------------CC-CC
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG-----------------------------FT-QD 590 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg-----------------------------l~-~d 590 (659)
.+.+||-||.|.|.+...+... +..++++||+++.+++.|++.+. ++ ++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 4579999999999988888774 56799999999999999987541 11 11
Q ss_pred CCeeEE------eccc-c----hhHHHHHHHhhccCCCCcEEEecCchH
Q 006149 591 KSLKVF------NHLF-C----LQLEEDVNLVLFGLSSESCIKDNSFPE 628 (659)
Q Consensus 591 ~rl~vf------~~l~-~----~~f~~~~~~~Lf~~~~~g~~~~n~~~~ 628 (659)
...|+. .+++ + ..+...++++| +|+|.++...+..
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L---kpgG~li~~~~~~ 158 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERL---SPGGYFIGTTPNS 158 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTE---EEEEEEEEEEECH
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHh---CCCcEEEEecCCh
Confidence 245544 1221 1 37888899999 9999998877543
No 467
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=94.79 E-value=0.077 Score=50.45 Aligned_cols=77 Identities=21% Similarity=0.154 Sum_probs=57.2
Q ss_pred eEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCC-------------CCCCeeEE----ecc---c
Q 006149 544 KAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFT-------------QDKSLKVF----NHL---F 600 (659)
Q Consensus 544 ~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~-------------~d~rl~vf----~~l---~ 600 (659)
+||-||.|.|.+...+... +.++++||+++.+++.|++.+ ++. ++...|+. .|+ .
T Consensus 32 ~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~ 109 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIFCHLPSSL 109 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEECCCCCHHH
T ss_pred CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEhhcCCHHH
Confidence 9999999999999999886 459999999999999999875 110 11233433 222 1
Q ss_pred chhHHHHHHHhhccCCCCcEEEecC
Q 006149 601 CLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 601 ~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
...+.+.+.++| +|+|.++...
T Consensus 110 ~~~~l~~~~~~L---~pgG~l~~~~ 131 (202)
T 2kw5_A 110 RQQLYPKVYQGL---KPGGVFILEG 131 (202)
T ss_dssp HHHHHHHHHTTC---CSSEEEEEEE
T ss_pred HHHHHHHHHHhc---CCCcEEEEEE
Confidence 345677888888 9999887754
No 468
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=94.77 E-value=0.056 Score=56.78 Aligned_cols=79 Identities=19% Similarity=0.199 Sum_probs=56.6
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCC---------------CCCCeeEE--e--
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFT---------------QDKSLKVF--N-- 597 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~---------------~d~rl~vf--~-- 597 (659)
....+||-||.|.|.++.++.+. +..++++||+++ +++.|++.+ |+. +++..|+. +
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~ 140 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWM 140 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCC
T ss_pred cCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCc
Confidence 34579999999999999999987 445999999997 889998764 321 11234433 1
Q ss_pred --ccc----chhHHHHHHHhhccCCCCcEEEe
Q 006149 598 --HLF----CLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 598 --~l~----~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
.+. -..+...+.++| +|+|.+..
T Consensus 141 ~~~l~~~~~~~~~l~~~~~~L---kpgG~lip 169 (340)
T 2fyt_A 141 GYFLLFESMLDSVLYAKNKYL---AKGGSVYP 169 (340)
T ss_dssp BTTBTTTCHHHHHHHHHHHHE---EEEEEEES
T ss_pred hhhccCHHHHHHHHHHHHhhc---CCCcEEEc
Confidence 121 134667778899 99998874
No 469
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=94.72 E-value=0.082 Score=53.39 Aligned_cols=83 Identities=11% Similarity=-0.027 Sum_probs=59.6
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCC-------------------CCCCeeEE----
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-------------------QDKSLKVF---- 596 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~-------------------~d~rl~vf---- 596 (659)
....+||-||.|.|.+...+... +..++++||+++.+++.|++.+.-. .+...|+.
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 34579999999999888887776 4459999999999999999875211 12234443
Q ss_pred --ecc-----cchhHHHHHHHhhccCCCCcEEEecCc
Q 006149 597 --NHL-----FCLQLEEDVNLVLFGLSSESCIKDNSF 626 (659)
Q Consensus 597 --~~l-----~~~~f~~~~~~~Lf~~~~~g~~~~n~~ 626 (659)
.++ ....+.+.+.++| +|+|.++....
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~L---kpgG~l~~~~~ 175 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHL---RPGGYFIMTVP 175 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTE---EEEEEEEEEEE
T ss_pred hhhhhcCCHHHHHHHHHHHHHhc---CCCCEEEEEEC
Confidence 111 1246778889999 99998877553
No 470
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=94.69 E-value=0.048 Score=52.30 Aligned_cols=77 Identities=16% Similarity=0.106 Sum_probs=57.2
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCc-cEEEEecChhHHHHHHhhcC-----------CC-CCCCeeEE------ecc-c
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFV-GIEAVELDLTMLNLAEDYFG-----------FT-QDKSLKVF------NHL-F 600 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~-~i~~VEiDp~V~~vA~~~Fg-----------l~-~d~rl~vf------~~l-~ 600 (659)
...+||-||.|.|.+...+ .. ++++||+++.+++.|++.+. ++ ++...|+. +|+ .
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~ 110 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVED 110 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCSC
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcCC
Confidence 4579999999999988887 34 89999999999999998751 11 12234443 333 2
Q ss_pred chhHHHHHHHhhccCCCCcEEEecC
Q 006149 601 CLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 601 ~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
...+.+.+.++| +|+|.+....
T Consensus 111 ~~~~l~~~~~~L---~pgG~l~i~~ 132 (211)
T 2gs9_A 111 VERVLLEARRVL---RPGGALVVGV 132 (211)
T ss_dssp HHHHHHHHHHHE---EEEEEEEEEE
T ss_pred HHHHHHHHHHHc---CCCCEEEEEe
Confidence 457888999999 9999776643
No 471
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=94.64 E-value=0.11 Score=53.01 Aligned_cols=46 Identities=20% Similarity=0.205 Sum_probs=40.1
Q ss_pred CCCeEEEEccC---cchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC
Q 006149 541 KSVKAVVIGLG---AGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG 586 (659)
Q Consensus 541 ~~~~vLiiGlG---gG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg 586 (659)
...++|-||.| +|.+...+.+..|+.+|+.||+||.|++.||.-+.
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~ 126 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLA 126 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhc
Confidence 45789999999 56777777788999999999999999999998774
No 472
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=94.62 E-value=0.3 Score=56.91 Aligned_cols=79 Identities=18% Similarity=0.148 Sum_probs=58.8
Q ss_pred CCCeEEEEccCcchHHHHHHhhC-CCccEEEEecChhHHHHHHhhc---------CCC--------------CCCCeeEE
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYF---------GFT--------------QDKSLKVF 596 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~-p~~~i~~VEiDp~V~~vA~~~F---------gl~--------------~d~rl~vf 596 (659)
.+.+||=||-|.|.+...|.+.. |..+|++||+++.+++.|++-+ +++ .+...|+.
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlV 800 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIG 800 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEE
Confidence 45799999999999999999988 5679999999999999998822 221 12233432
Q ss_pred ------ecccch---hHHHHHHHhhccCCCCcEEE
Q 006149 597 ------NHLFCL---QLEEDVNLVLFGLSSESCIK 622 (659)
Q Consensus 597 ------~~l~~~---~f~~~~~~~Lf~~~~~g~~~ 622 (659)
+|+... .|.+.+.++| +|+.+++
T Consensus 801 V~~eVLeHL~dp~l~~~L~eI~RvL---KPG~LII 832 (950)
T 3htx_A 801 TCLEVIEHMEEDQACEFGEKVLSLF---HPKLLIV 832 (950)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTT---CCSEEEE
T ss_pred EEeCchhhCChHHHHHHHHHHHHHc---CCCEEEE
Confidence 555533 3788999999 9984433
No 473
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=94.61 E-value=0.052 Score=57.21 Aligned_cols=80 Identities=15% Similarity=0.198 Sum_probs=58.1
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCC---------------CCCeeEE-e----
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQ---------------DKSLKVF-N---- 597 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~---------------d~rl~vf-~---- 597 (659)
...+||-||.|.|.+..++.+. +..+|++||+++ +++.|++.. |+.. +...|+. .
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred CCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 3478999999999999999988 556999999996 899998765 3221 2233443 1
Q ss_pred -cc----cchhHHHHHHHhhccCCCCcEEEecC
Q 006149 598 -HL----FCLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 598 -~l----~~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
.+ .-..+...+.++| +|+|++..+.
T Consensus 144 ~~l~~~~~~~~~l~~~~r~L---kpgG~li~~~ 173 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWL---APDGLIFPDR 173 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHE---EEEEEEESCE
T ss_pred ccccCchhHHHHHHHHHHhC---CCCCEEcccc
Confidence 12 2344667778999 9999987644
No 474
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=94.57 E-value=0.035 Score=53.68 Aligned_cols=47 Identities=13% Similarity=0.165 Sum_probs=44.2
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG 586 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg 586 (659)
+.+.+||=||-|-|.++..+....|.++++++|||+.++++|++.+.
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~ 94 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIG 94 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHH
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999883
No 475
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=94.55 E-value=0.065 Score=54.82 Aligned_cols=43 Identities=14% Similarity=0.143 Sum_probs=39.9
Q ss_pred CCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc
Q 006149 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF 585 (659)
Q Consensus 542 ~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F 585 (659)
..+||=||.|.|.+...+.+. |..++++||+++..+++|++-.
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~ 166 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNA 166 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHH
Confidence 368999999999999999999 9999999999999999999764
No 476
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=94.49 E-value=0.062 Score=55.52 Aligned_cols=82 Identities=11% Similarity=0.152 Sum_probs=57.3
Q ss_pred CCCeEEEEccCcch-HHHHHHhhCCCccEEEEecChhHHHHHHhhc---CC----------------------------C
Q 006149 541 KSVKAVVIGLGAGL-LPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GF----------------------------T 588 (659)
Q Consensus 541 ~~~~vLiiGlGgG~-l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl----------------------------~ 588 (659)
...+||-||.|+|. +..++... ..+|++||+++.+++.|++.. +. .
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~--~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE--IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC--CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 35789999999775 55555432 358999999999999999763 21 0
Q ss_pred CCCCeeEEe------cccc----hhHHHHHHHhhccCCCCcEEEecCch
Q 006149 589 QDKSLKVFN------HLFC----LQLEEDVNLVLFGLSSESCIKDNSFP 627 (659)
Q Consensus 589 ~d~rl~vf~------~l~~----~~f~~~~~~~Lf~~~~~g~~~~n~~~ 627 (659)
++...|+.. +++. ..+.+.+.++| +|+|.+......
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~L---kpGG~~i~~~~~ 171 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELT---ASGGKVLITTMD 171 (302)
T ss_dssp CSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHE---EEEEEEEEEEEC
T ss_pred cCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHc---CCCCEEEEEeCC
Confidence 123455541 1221 56888999999 999998876643
No 477
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=94.48 E-value=0.26 Score=51.17 Aligned_cols=105 Identities=16% Similarity=0.109 Sum_probs=75.7
Q ss_pred CCeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhc----CCCCcEEEEeecCCCC---------CCCCcc
Q 006149 69 PPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR----DRSDMRWRVMDMTSMQ---------FMDETF 135 (659)
Q Consensus 69 ~~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~----~~~~i~~~~~D~~~l~---------~~~~sF 135 (659)
...|+++|||-=.....+.......++-|| .+.+++.-++.... ...+..++.+|+.+ . +.....
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~P 180 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSAR 180 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSC
T ss_pred CCeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCC
Confidence 357999999987776665422124899999 47787755454432 23567889999987 3 222345
Q ss_pred cEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 136 DVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 136 DvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
-++++.|+++++...+ ...+++.+...+.||+.+++....
T Consensus 181 t~~i~Egvl~Yl~~~~-----~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 181 TAWLAEGLLMYLPATA-----QDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp EEEEECSCGGGSCHHH-----HHHHHHHHHHTCCTTCEEEEECCC
T ss_pred EEEEEechHhhCCHHH-----HHHHHHHHHHhCCCCeEEEEEecC
Confidence 6888999999987644 678999999999999888887654
No 478
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=94.39 E-value=0.1 Score=54.83 Aligned_cols=45 Identities=20% Similarity=0.211 Sum_probs=40.7
Q ss_pred CCCeEEEEccCcchHHHHHHhhC-CCccEEEEecChhHHHHHHhhc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYF 585 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~-p~~~i~~VEiDp~V~~vA~~~F 585 (659)
...+||=+|.|.|+++..+.... |..+++++|+||.+++.|++-+
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~ 248 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAA 248 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHH
Confidence 34689999999999999999987 8889999999999999999865
No 479
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=94.37 E-value=0.092 Score=52.95 Aligned_cols=51 Identities=22% Similarity=0.384 Sum_probs=43.8
Q ss_pred CCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCCCCCCeeEE
Q 006149 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVF 596 (659)
Q Consensus 542 ~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~~d~rl~vf 596 (659)
..+||-||-|.|.++..|.... .++++||+|+.+++.|++.+.- .+++++.
T Consensus 30 ~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~--~~~v~~i 80 (255)
T 3tqs_A 30 TDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQ--QKNITIY 80 (255)
T ss_dssp TCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTT--CTTEEEE
T ss_pred cCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhh--CCCcEEE
Confidence 4689999999999999999875 5899999999999999998864 3466655
No 480
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=94.27 E-value=0.055 Score=50.38 Aligned_cols=45 Identities=13% Similarity=0.040 Sum_probs=39.6
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG 586 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg 586 (659)
...+||-||.|.|.+...+... +..++++||+|+.+++.|++.+.
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~ 75 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNII 75 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHH
T ss_pred CCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHH
Confidence 4569999999999999988877 55699999999999999998773
No 481
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=94.22 E-value=0.12 Score=57.07 Aligned_cols=80 Identities=23% Similarity=0.257 Sum_probs=55.5
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCC--------------CCCeeEE-e-----
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQ--------------DKSLKVF-N----- 597 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~--------------d~rl~vf-~----- 597 (659)
...+||-||.|.|.++.++.+ .+..+|++||+++ +++.|++.+ |+.+ .++.|+. .
T Consensus 158 ~~~~VLDiGcGtG~la~~la~-~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~fD~Ivs~~~~~ 235 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQ-AGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGY 235 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHH-TTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCHH
T ss_pred CCCEEEEecCcccHHHHHHHH-cCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccCCCeEEEEEeCchH
Confidence 457999999999999999987 4667999999999 889998754 3321 1123433 1
Q ss_pred cccc---hhHHHHHHHhhccCCCCcEEEecC
Q 006149 598 HLFC---LQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 598 ~l~~---~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
++.. .+.+..++++| +++|.+....
T Consensus 236 ~~~~e~~~~~l~~~~~~L---kpgG~li~~~ 263 (480)
T 3b3j_A 236 MLFNERMLESYLHAKKYL---KPSGNMFPTI 263 (480)
T ss_dssp HHTCHHHHHHHHHGGGGE---EEEEEEESCE
T ss_pred hcCcHHHHHHHHHHHHhc---CCCCEEEEEe
Confidence 1111 23444567888 9999887543
No 482
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=94.16 E-value=0.12 Score=52.68 Aligned_cols=48 Identities=23% Similarity=0.337 Sum_probs=42.2
Q ss_pred eEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCCCCCCeeEE
Q 006149 544 KAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVF 596 (659)
Q Consensus 544 ~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~~d~rl~vf 596 (659)
+||-||-|.|.+...|.... .++++||+|+.+++.+++.+. +.++++.
T Consensus 49 ~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~---~~~v~vi 96 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLS---GLPVRLV 96 (271)
T ss_dssp CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTT---TSSEEEE
T ss_pred eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcC---CCCEEEE
Confidence 89999999999999999875 589999999999999999886 2466555
No 483
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.13 E-value=0.19 Score=53.09 Aligned_cols=95 Identities=15% Similarity=0.144 Sum_probs=64.3
Q ss_pred CCCCCeEEEECCCc-chHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCC-------CCCCccc
Q 006149 66 SSPPPQILVPGCGN-SRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ-------FMDETFD 136 (659)
Q Consensus 66 ~~~~~~ILDiGCG~-G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~-------~~~~sFD 136 (659)
..++.+||.+|||. |.++..+++. |...|+++|.++.-++.+++.- .. .+ .|..+.. ..++.||
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lG----a~-~v--i~~~~~~~~~~~~~~~~gg~D 260 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLG----AT-HV--INSKTQDPVAAIKEITDGGVN 260 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHT----CS-EE--EETTTSCHHHHHHHHTTSCEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcC----CC-EE--ecCCccCHHHHHHHhcCCCCc
Confidence 36789999999987 7778888775 7657999999998877664321 11 11 1222111 1123799
Q ss_pred EEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 137 VILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 137 vVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+|++.-.- ...+....+.|++||+++++...
T Consensus 261 ~vid~~g~-------------~~~~~~~~~~l~~~G~iv~~G~~ 291 (371)
T 1f8f_A 261 FALESTGS-------------PEILKQGVDALGILGKIAVVGAP 291 (371)
T ss_dssp EEEECSCC-------------HHHHHHHHHTEEEEEEEEECCCC
T ss_pred EEEECCCC-------------HHHHHHHHHHHhcCCEEEEeCCC
Confidence 99864321 15688899999999999887643
No 484
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=94.13 E-value=0.11 Score=50.39 Aligned_cols=84 Identities=13% Similarity=0.075 Sum_probs=59.3
Q ss_pred CCCeEEEEccCcchHHHHHHhhC-----CCccEEEEecChhHHHHHHhhcCCCC-----CCC------------------
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECM-----PFVGIEAVELDLTMLNLAEDYFGFTQ-----DKS------------------ 592 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~-----p~~~i~~VEiDp~V~~vA~~~Fgl~~-----d~r------------------ 592 (659)
...+||-||.|.|.+...+.+.. |..++++||+++.+++.|++.+.-.. .++
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCcc
Confidence 34699999999999999998876 56799999999999999998752100 111
Q ss_pred ---eeEE-ecccchhHHHHHHHhhccCCCCcEEEecCch
Q 006149 593 ---LKVF-NHLFCLQLEEDVNLVLFGLSSESCIKDNSFP 627 (659)
Q Consensus 593 ---l~vf-~~l~~~~f~~~~~~~Lf~~~~~g~~~~n~~~ 627 (659)
.|+. .......+.+.+.+.| +++|.++....+
T Consensus 160 ~~~fD~I~~~~~~~~~~~~~~~~L---kpgG~lv~~~~~ 195 (227)
T 2pbf_A 160 LGLFDAIHVGASASELPEILVDLL---AENGKLIIPIEE 195 (227)
T ss_dssp HCCEEEEEECSBBSSCCHHHHHHE---EEEEEEEEEEEE
T ss_pred CCCcCEEEECCchHHHHHHHHHhc---CCCcEEEEEEcc
Confidence 2221 1111224457788888 999988876643
No 485
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=93.95 E-value=0.2 Score=53.51 Aligned_cols=70 Identities=17% Similarity=0.074 Sum_probs=55.5
Q ss_pred CeEEEECCCcchHHHHHHHcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCC--------CCCcccEEEec
Q 006149 70 PQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQF--------MDETFDVILDK 141 (659)
Q Consensus 70 ~~ILDiGCG~G~~s~~La~~g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~--------~~~sFDvVi~~ 141 (659)
.++||+-||.|.++.-+...|+..+.++|+++.+++..+. +.++..++++|+.++.. ....+|+|+..
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~----N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~gg 78 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAI----NFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGG 78 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHH----HCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEEC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHH----hCCCCceEecChhhcCHHHHHhhcccCCCeeEEEec
Confidence 5899999999999999999999778899999988764432 24567888999988742 24679999965
Q ss_pred cc
Q 006149 142 GG 143 (659)
Q Consensus 142 g~ 143 (659)
..
T Consensus 79 pP 80 (376)
T 3g7u_A 79 PP 80 (376)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 486
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=93.89 E-value=0.16 Score=51.49 Aligned_cols=44 Identities=14% Similarity=0.085 Sum_probs=38.8
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF 585 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F 585 (659)
....+||=||.|.|.++..|.... .+|++||+++.+++.|++.+
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~~g--~~V~gvD~S~~ml~~Ar~~~ 87 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALERG--ASVTVFDFSQRMCDDLAEAL 87 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHT
T ss_pred CCcCEEEEEeCcchHHHHHHHhcC--CEEEEEECCHHHHHHHHHHH
Confidence 345699999999999999998864 58999999999999999875
No 487
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=93.86 E-value=0.41 Score=51.62 Aligned_cols=43 Identities=19% Similarity=0.067 Sum_probs=38.1
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHh
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAED 583 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~ 583 (659)
...+||=||-|.|.++..+....+..++++|||+|.++++|++
T Consensus 173 ~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~ 215 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAET 215 (438)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH
Confidence 3468999999999999999888776569999999999999985
No 488
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=93.85 E-value=0.068 Score=49.07 Aligned_cols=43 Identities=14% Similarity=-0.039 Sum_probs=38.5
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF 585 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F 585 (659)
...+||-+|.|.|.+...+....+. +++||+|+.+++.|++.+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~--v~~vD~~~~~~~~a~~~~ 83 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE--AVLVEKDPEAVRLLKENV 83 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE--EEEECCCHHHHHHHHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHH
Confidence 4468999999999999999988765 999999999999999865
No 489
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=93.82 E-value=0.12 Score=54.15 Aligned_cols=78 Identities=8% Similarity=0.031 Sum_probs=55.3
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCC------------CCCCeeEE------ec
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFT------------QDKSLKVF------NH 598 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~------------~d~rl~vf------~~ 598 (659)
+...+||=||.|.|.+...+.+.+|+.+++++|+ |.++. ++.. ++. +-+..|++ .+
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~~p~~D~v~~~~vlh~ 259 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLREVPHADVHVLKRILHN 259 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTCCCCCSEEEEESCGGG
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCCCCCCcEEEEehhccC
Confidence 4567999999999999999999999999999999 55655 3222 111 11133443 22
Q ss_pred ccc---hhHHHHHHHhhccCCCCcEEEe
Q 006149 599 LFC---LQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 599 l~~---~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
+-. ..+.+.++++| +|+|.+..
T Consensus 260 ~~d~~~~~~L~~~~~~L---kpgG~l~i 284 (348)
T 3lst_A 260 WGDEDSVRILTNCRRVM---PAHGRVLV 284 (348)
T ss_dssp SCHHHHHHHHHHHHHTC---CTTCEEEE
T ss_pred CCHHHHHHHHHHHHHhc---CCCCEEEE
Confidence 222 47888999999 99997755
No 490
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=93.81 E-value=0.13 Score=47.50 Aligned_cols=43 Identities=14% Similarity=0.162 Sum_probs=39.2
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF 585 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F 585 (659)
...+||-||.|.|.+...+.. +..++++||+++.+++.|++.+
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~ 77 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNL 77 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHH
Confidence 446999999999999999988 7789999999999999999886
No 491
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=93.78 E-value=0.09 Score=55.31 Aligned_cols=79 Identities=13% Similarity=0.131 Sum_probs=58.1
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC-------C-CCCCCeeEE------eccc---chh
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG-------F-TQDKSLKVF------NHLF---CLQ 603 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg-------l-~~d~rl~vf------~~l~---~~~ 603 (659)
...+||=||.|.|.+...+.+.+|+.+++++|+ |.+++.|+++=+ + .+-+..|++ .++- ...
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~~~~~~D~v~~~~vlh~~~d~~~~~ 271 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTGNENLNFVGGDMFKSIPSADAVLLKWVLHDWNDEQSLK 271 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCCCSSEEEEECCTTTCCCCCSEEEEESCGGGSCHHHHHH
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcccCCCcEEEeCccCCCCCCceEEEEcccccCCCHHHHHH
Confidence 447999999999999999999999999999999 899998886310 0 011224444 1221 237
Q ss_pred HHHHHHHhhccCCC---CcEEEe
Q 006149 604 LEEDVNLVLFGLSS---ESCIKD 623 (659)
Q Consensus 604 f~~~~~~~Lf~~~~---~g~~~~ 623 (659)
+.+.++++| +| +|.+..
T Consensus 272 ~l~~~~~~L---~p~~~gG~l~i 291 (358)
T 1zg3_A 272 ILKNSKEAI---SHKGKDGKVII 291 (358)
T ss_dssp HHHHHHHHT---GGGGGGCEEEE
T ss_pred HHHHHHHhC---CCCCCCcEEEE
Confidence 888999999 99 995544
No 492
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=93.71 E-value=0.1 Score=55.58 Aligned_cols=81 Identities=15% Similarity=0.199 Sum_probs=58.1
Q ss_pred CCCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCC--------------CCCeeEE-e----
Q 006149 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQ--------------DKSLKVF-N---- 597 (659)
Q Consensus 540 ~~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~--------------d~rl~vf-~---- 597 (659)
....+||-||.|.|.+..++.+... .+|++||++ .+++.|++.+ ++.. ..+.|+. .
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~-~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGA-RKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIISEWMG 139 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTC-SEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEEEECCCB
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCC-CEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEEEEcChh
Confidence 3457999999999999999998843 499999999 8999998876 3321 0223333 1
Q ss_pred c-cc----chhHHHHHHHhhccCCCCcEEEecC
Q 006149 598 H-LF----CLQLEEDVNLVLFGLSSESCIKDNS 625 (659)
Q Consensus 598 ~-l~----~~~f~~~~~~~Lf~~~~~g~~~~n~ 625 (659)
+ +. -..+...++++| +|+|++....
T Consensus 140 ~~l~~e~~~~~~l~~~~~~L---kpgG~li~~~ 169 (376)
T 3r0q_C 140 YFLLRESMFDSVISARDRWL---KPTGVMYPSH 169 (376)
T ss_dssp TTBTTTCTHHHHHHHHHHHE---EEEEEEESSE
T ss_pred hcccchHHHHHHHHHHHhhC---CCCeEEEEec
Confidence 1 11 234677888899 9999987643
No 493
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=93.57 E-value=0.099 Score=52.05 Aligned_cols=80 Identities=9% Similarity=0.123 Sum_probs=59.1
Q ss_pred CCCeEEEEccCcchHHHHHHhh-CCCccEEEEecChhHHHHHHhhcCCCC------------------CCCee-EEeccc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHEC-MPFVGIEAVELDLTMLNLAEDYFGFTQ------------------DKSLK-VFNHLF 600 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~-~p~~~i~~VEiDp~V~~vA~~~Fgl~~------------------d~rl~-vf~~l~ 600 (659)
...+||=||.|.|.+...|.+. .|+-+|.+||++|.+++.|++-..-.. ++.+| +|..+.
T Consensus 77 pG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~~ 156 (233)
T 4df3_A 77 EGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYADVA 156 (233)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEECCC
T ss_pred CCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEecc
Confidence 3468999999999999999986 477799999999999999887652110 11224 343332
Q ss_pred ----chhHHHHHHHhhccCCCCcEEEe
Q 006149 601 ----CLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 601 ----~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
...+...++++| +|+|.++.
T Consensus 157 ~~~~~~~~l~~~~r~L---KpGG~lvI 180 (233)
T 4df3_A 157 QPEQAAIVVRNARFFL---RDGGYMLM 180 (233)
T ss_dssp CTTHHHHHHHHHHHHE---EEEEEEEE
T ss_pred CChhHHHHHHHHHHhc---cCCCEEEE
Confidence 235778888999 99997765
No 494
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=93.56 E-value=0.22 Score=53.20 Aligned_cols=98 Identities=15% Similarity=0.191 Sum_probs=64.8
Q ss_pred CCCCeEEEECCCc-chHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCC---------CCCcc
Q 006149 67 SPPPQILVPGCGN-SRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQF---------MDETF 135 (659)
Q Consensus 67 ~~~~~ILDiGCG~-G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~---------~~~sF 135 (659)
.++.+||.+|||. |.++..+++. |..+|+++|.++.-++.+++ .+ ..+ .|..+..+ ....|
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lG--a~~--i~~~~~~~~~~~~~~~~~g~g~ 255 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----AG--FET--IDLRNSAPLRDQIDQILGKPEV 255 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----TT--CEE--EETTSSSCHHHHHHHHHSSSCE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cC--CcE--EcCCCcchHHHHHHHHhCCCCC
Confidence 6789999999987 7888888875 76689999999977765432 12 232 23322211 12369
Q ss_pred cEEEeccccccc--------CCcccchHHHHHHHHHHHhccccCeEEEEEEc
Q 006149 136 DVILDKGGLDAL--------MEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (659)
Q Consensus 136 DvVi~~g~l~~l--------~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~ 179 (659)
|+|++.-.-... ..+. ..+....+.|++||+++++..
T Consensus 256 Dvvid~~g~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 256 DCGVDAVGFEAHGLGDEANTETPN-------GALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp EEEEECSCTTCBCSGGGTTSBCTT-------HHHHHHHHHEEEEEEEECCSC
T ss_pred CEEEECCCCccccccccccccccH-------HHHHHHHHHHhcCCEEEEecc
Confidence 999975432210 0011 468889999999999987654
No 495
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=93.55 E-value=0.19 Score=48.89 Aligned_cols=81 Identities=10% Similarity=0.030 Sum_probs=56.3
Q ss_pred CCCeEEEEccCcchHHHHHHhhC-CCccEEEEecChhHHHHHHhhcCCC----------C--------CCCeeEE-eccc
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFGFT----------Q--------DKSLKVF-NHLF 600 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~-p~~~i~~VEiDp~V~~vA~~~Fgl~----------~--------d~rl~vf-~~l~ 600 (659)
...+||-+|.|.|.+...+...+ |..++++||+++.+++.+++..... . ++..|+. ....
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~ 152 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVA 152 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECCC
Confidence 34689999999999999999875 5679999999998888776543211 0 1123332 1121
Q ss_pred c----hhHHHHHHHhhccCCCCcEEEec
Q 006149 601 C----LQLEEDVNLVLFGLSSESCIKDN 624 (659)
Q Consensus 601 ~----~~f~~~~~~~Lf~~~~~g~~~~n 624 (659)
. ..+...+.++| +|+|.++.-
T Consensus 153 ~~~~~~~~l~~~~~~L---kpgG~l~~~ 177 (227)
T 1g8a_A 153 QPTQAKILIDNAEVYL---KRGGYGMIA 177 (227)
T ss_dssp STTHHHHHHHHHHHHE---EEEEEEEEE
T ss_pred CHhHHHHHHHHHHHhc---CCCCEEEEE
Confidence 1 24578899999 999977663
No 496
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=93.55 E-value=0.075 Score=52.47 Aligned_cols=80 Identities=14% Similarity=0.190 Sum_probs=60.7
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhc---CCCC-----------------CCCeeEE--ec
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQ-----------------DKSLKVF--NH 598 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~F---gl~~-----------------d~rl~vf--~~ 598 (659)
...+||=||.|.|.+...+....|..+|++||+++.+++.|++.+ |+.. +...|+. ..
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARA 149 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEEC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEec
Confidence 346999999999999999998888899999999999999998753 4320 2233433 11
Q ss_pred c-cchhHHHHHHHhhccCCCCcEEEe
Q 006149 599 L-FCLQLEEDVNLVLFGLSSESCIKD 623 (659)
Q Consensus 599 l-~~~~f~~~~~~~Lf~~~~~g~~~~ 623 (659)
+ .-..+.+.+.++| +++|.++.
T Consensus 150 ~~~~~~~l~~~~~~L---kpgG~l~~ 172 (240)
T 1xdz_A 150 VARLSVLSELCLPLV---KKNGLFVA 172 (240)
T ss_dssp CSCHHHHHHHHGGGE---EEEEEEEE
T ss_pred cCCHHHHHHHHHHhc---CCCCEEEE
Confidence 2 2356778888899 99998765
No 497
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=93.53 E-value=0.12 Score=51.74 Aligned_cols=51 Identities=29% Similarity=0.447 Sum_probs=42.4
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcCCCCCCCeeEE
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVF 596 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fgl~~d~rl~vf 596 (659)
...+||=||-|.|.+...|... +..++++||+|+.+++.+++. + ..++++.
T Consensus 31 ~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~-~---~~~v~~i 81 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSI-G---DERLEVI 81 (249)
T ss_dssp TTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTS-C---CTTEEEE
T ss_pred CcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhc-c---CCCeEEE
Confidence 3468999999999999999987 446999999999999999987 3 3456554
No 498
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=93.51 E-value=0.3 Score=51.61 Aligned_cols=94 Identities=17% Similarity=0.193 Sum_probs=63.5
Q ss_pred CCCCeEEEECCCc-chHHHHHHHc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCC----------CCCCc
Q 006149 67 SPPPQILVPGCGN-SRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ----------FMDET 134 (659)
Q Consensus 67 ~~~~~ILDiGCG~-G~~s~~La~~-g~~~VtgvD~S~~~i~~~~~~~~~~~~~i~~~~~D~~~l~----------~~~~s 134 (659)
.++.+||..|+|. |.++..+++. |...|+++|.++.-++.+++.-. . .. .|..+.. ...+.
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa---~--~v--i~~~~~~~~~~i~~~~~~~~gg 253 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGA---T--AT--VDPSAGDVVEAIAGPVGLVPGG 253 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTC---S--EE--ECTTSSCHHHHHHSTTSSSTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC---C--EE--ECCCCcCHHHHHHhhhhccCCC
Confidence 5789999999976 6677777775 76689999999987775543211 1 11 1211111 22347
Q ss_pred ccEEEecccccccCCcccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 006149 135 FDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (659)
Q Consensus 135 FDvVi~~g~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~lvi~~~~ 180 (659)
+|+|++.-. . ...+....+.|++||+++++...
T Consensus 254 ~Dvvid~~G-----~--------~~~~~~~~~~l~~~G~vv~~G~~ 286 (370)
T 4ej6_A 254 VDVVIECAG-----V--------AETVKQSTRLAKAGGTVVILGVL 286 (370)
T ss_dssp EEEEEECSC-----C--------HHHHHHHHHHEEEEEEEEECSCC
T ss_pred CCEEEECCC-----C--------HHHHHHHHHHhccCCEEEEEecc
Confidence 999996421 1 15688899999999999887643
No 499
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=93.42 E-value=0.13 Score=53.16 Aligned_cols=43 Identities=23% Similarity=0.271 Sum_probs=39.0
Q ss_pred CCeEEEEccCcchHHHHHHhhCCCccEEEEecChhHHHHHHhhcC
Q 006149 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG 586 (659)
Q Consensus 542 ~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V~~vA~~~Fg 586 (659)
..+||-||-|.|.++..|... ..++++||+|+.+++.|++.+.
T Consensus 51 ~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~ 93 (295)
T 3gru_A 51 DDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKE 93 (295)
T ss_dssp TCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHH
T ss_pred cCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhc
Confidence 468999999999999999988 3589999999999999998874
No 500
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=93.40 E-value=0.23 Score=48.15 Aligned_cols=81 Identities=14% Similarity=0.113 Sum_probs=55.7
Q ss_pred CCCeEEEEccCcchHHHHHHhhCCCccEEEEecChhH----HHHHHhhcCC--------------CCCCCeeEE-eccc-
Q 006149 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTM----LNLAEDYFGF--------------TQDKSLKVF-NHLF- 600 (659)
Q Consensus 541 ~~~~vLiiGlGgG~l~~~l~~~~p~~~i~~VEiDp~V----~~vA~~~Fgl--------------~~d~rl~vf-~~l~- 600 (659)
...+||=||-|.|.+...+....+..+|++||++|.+ .+.|++.-+. +.....|+. ..+.
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~~~ 136 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDIAQ 136 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEECCCS
T ss_pred CCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEeccC
Confidence 3468999999999999999988876699999999974 5566643110 001233432 2221
Q ss_pred ---chhHHHHHHHhhccCCCCcEEEec
Q 006149 601 ---CLQLEEDVNLVLFGLSSESCIKDN 624 (659)
Q Consensus 601 ---~~~f~~~~~~~Lf~~~~~g~~~~n 624 (659)
...+...++++| +|+|.++..
T Consensus 137 ~~~~~~~l~~~~r~L---kpgG~l~i~ 160 (210)
T 1nt2_A 137 KNQIEILKANAEFFL---KEKGEVVIM 160 (210)
T ss_dssp TTHHHHHHHHHHHHE---EEEEEEEEE
T ss_pred hhHHHHHHHHHHHHh---CCCCEEEEE
Confidence 122467889999 999988765
Done!