Query 006152
Match_columns 658
No_of_seqs 274 out of 1448
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 17:23:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006152.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006152hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a0u_A Initiation factor 2B; S 100.0 1.6E-71 5.4E-76 597.2 29.0 316 297-639 25-370 (383)
2 2yvk_A Methylthioribose-1-phos 100.0 1.5E-71 5.1E-76 595.7 26.9 316 297-648 36-368 (374)
3 3a11_A Translation initiation 100.0 1.4E-70 4.8E-75 582.3 29.9 313 310-651 15-328 (338)
4 1t9k_A Probable methylthioribo 100.0 4.3E-71 1.5E-75 587.6 25.5 312 297-647 14-342 (347)
5 1t5o_A EIF2BD, translation ini 100.0 3E-70 1E-74 581.9 28.8 310 300-647 12-338 (351)
6 3ecs_A Translation initiation 100.0 4.3E-64 1.5E-68 527.5 22.9 284 349-650 21-306 (315)
7 1vb5_A Translation initiation 100.0 2.1E-63 7.2E-68 514.3 27.4 274 328-640 2-275 (276)
8 1w2w_B 5-methylthioribose-1-ph 100.0 6.4E-49 2.2E-53 386.7 10.4 171 478-648 2-191 (191)
9 1w2w_A 5-methylthioribose-1-ph 99.9 4.7E-23 1.6E-27 205.4 13.2 165 297-482 15-209 (211)
10 1uj6_A Ribose 5-phosphate isom 98.1 1.1E-05 3.7E-10 81.3 10.1 126 440-582 8-140 (227)
11 2f8m_A Ribose 5-phosphate isom 97.9 3.5E-05 1.2E-09 78.5 9.0 130 439-582 11-148 (244)
12 1lk5_A D-ribose-5-phosphate is 97.8 7.9E-05 2.7E-09 75.1 9.8 128 440-582 6-140 (229)
13 1m0s_A Ribose-5-phosphate isom 97.7 5.1E-05 1.8E-09 76.1 7.7 129 440-582 6-136 (219)
14 3kwm_A Ribose-5-phosphate isom 97.4 0.00029 9.8E-09 70.9 8.5 120 440-572 12-132 (224)
15 3hhe_A Ribose-5-phosphate isom 97.4 0.0004 1.4E-08 71.1 9.2 119 440-572 27-149 (255)
16 1xtz_A Ribose-5-phosphate isom 97.4 0.00022 7.7E-09 73.3 7.4 119 440-572 21-153 (264)
17 1o8b_A Ribose 5-phosphate isom 97.3 4.4E-05 1.5E-09 76.5 0.4 119 440-572 6-126 (219)
18 3l7o_A Ribose-5-phosphate isom 97.1 0.001 3.4E-08 67.1 8.7 118 440-572 4-127 (225)
19 2pjm_A Ribose-5-phosphate isom 97.1 0.0022 7.4E-08 64.7 10.7 117 440-572 6-129 (226)
20 3uw1_A Ribose-5-phosphate isom 96.2 0.0071 2.4E-07 61.4 7.2 119 441-572 15-138 (239)
21 4gmk_A Ribose-5-phosphate isom 91.4 0.48 1.7E-05 47.7 8.2 117 440-572 7-130 (228)
22 3ixq_A Ribose-5-phosphate isom 88.1 1.1 3.7E-05 45.1 7.6 118 441-572 7-129 (226)
23 2hj0_A Putative citrate lyase, 80.0 15 0.0005 41.0 13.0 150 441-641 253-456 (519)
24 3ic5_A Putative saccharopine d 79.8 10 0.00036 31.5 9.3 98 455-568 5-105 (118)
25 3g0t_A Putative aminotransfera 78.9 11 0.00039 38.9 11.1 104 453-561 104-220 (437)
26 3hgm_A Universal stress protei 78.6 21 0.00071 30.9 11.2 60 499-562 77-147 (147)
27 1jw9_B Molybdopterin biosynthe 78.5 7.8 0.00027 38.6 9.3 109 444-563 21-153 (249)
28 3i6i_A Putative leucoanthocyan 78.4 5.2 0.00018 40.6 8.2 102 455-563 10-118 (346)
29 3s3t_A Nucleotide-binding prot 75.0 26 0.0009 30.3 10.9 59 500-562 77-145 (146)
30 1poi_B Glutaconate coenzyme A- 74.8 15 0.00051 37.4 10.3 93 441-540 8-116 (260)
31 4dq6_A Putative pyridoxal phos 71.6 18 0.0006 36.5 10.0 101 454-561 90-202 (391)
32 4gx0_A TRKA domain protein; me 71.3 5.8 0.0002 43.8 6.8 108 447-565 315-442 (565)
33 3e8x_A Putative NAD-dependent 71.2 7.4 0.00025 37.1 6.7 98 454-566 20-132 (236)
34 2o8r_A Polyphosphate kinase; s 71.1 4.9 0.00017 46.5 6.3 46 466-511 385-432 (705)
35 3h14_A Aminotransferase, class 70.2 22 0.00075 36.2 10.5 102 453-561 90-199 (391)
36 1jeo_A MJ1247, hypothetical pr 70.1 27 0.00094 32.0 10.2 84 446-530 31-133 (180)
37 1vim_A Hypothetical protein AF 69.7 34 0.0012 32.4 11.0 83 446-528 38-139 (200)
38 3dlo_A Universal stress protei 68.5 57 0.0019 29.1 11.8 104 456-562 26-154 (155)
39 3llv_A Exopolyphosphatase-rela 68.5 18 0.00061 31.7 8.2 91 455-562 6-101 (141)
40 3dqp_A Oxidoreductase YLBE; al 68.1 11 0.00038 35.4 7.2 100 457-565 2-106 (219)
41 3rrl_B Succinyl-COA:3-ketoacid 67.0 6 0.00021 39.0 5.1 95 441-541 2-111 (207)
42 1qz9_A Kynureninase; kynurenin 66.4 30 0.001 35.3 10.6 100 455-561 89-200 (416)
43 3d3u_A 4-hydroxybutyrate COA-t 66.3 36 0.0012 36.9 11.6 85 524-641 307-403 (439)
44 1t3i_A Probable cysteine desul 66.2 1E+02 0.0035 31.1 14.5 101 455-561 91-204 (420)
45 1kmj_A Selenocysteine lyase; p 65.3 1.2E+02 0.004 30.4 15.1 101 455-561 86-199 (406)
46 3rrl_A Succinyl-COA:3-ketoacid 64.4 19 0.00066 36.0 8.3 22 522-543 151-172 (235)
47 2z08_A Universal stress protei 64.0 69 0.0024 27.4 12.5 55 504-562 73-136 (137)
48 2dr1_A PH1308 protein, 386AA l 63.8 59 0.002 32.5 12.0 98 456-561 73-181 (386)
49 3idf_A USP-like protein; unive 63.8 16 0.00054 31.5 6.8 60 499-562 73-137 (138)
50 3kax_A Aminotransferase, class 63.6 24 0.00083 35.4 9.1 101 454-561 82-194 (383)
51 3dzz_A Putative pyridoxal 5'-p 63.5 32 0.0011 34.6 10.0 101 454-561 85-198 (391)
52 1m3s_A Hypothetical protein YC 63.5 45 0.0016 30.6 10.3 36 493-528 94-129 (186)
53 3c85_A Putative glutathione-re 63.1 24 0.00083 32.4 8.3 86 455-556 39-130 (183)
54 3sho_A Transcriptional regulat 62.0 60 0.002 29.8 10.8 37 493-529 102-138 (187)
55 3ezs_A Aminotransferase ASPB; 61.7 47 0.0016 33.3 10.9 104 453-561 81-192 (376)
56 3lvm_A Cysteine desulfurase; s 61.4 88 0.003 31.8 13.0 102 455-561 86-198 (423)
57 3l9w_A Glutathione-regulated p 61.1 15 0.00053 39.4 7.4 94 454-564 3-103 (413)
58 1eg5_A Aminotransferase; PLP-d 60.9 1.2E+02 0.0042 30.0 13.7 101 455-561 62-176 (384)
59 2gm3_A Unknown protein; AT3G01 60.6 23 0.00078 32.0 7.6 64 501-568 96-167 (175)
60 2w48_A Sorbitol operon regulat 60.4 13 0.00043 38.2 6.4 89 442-531 93-213 (315)
61 4ds3_A Phosphoribosylglycinami 60.0 18 0.00063 35.5 7.2 71 456-530 10-94 (209)
62 2huf_A Alanine glyoxylate amin 59.8 58 0.002 32.8 11.2 98 456-561 72-179 (393)
63 3fdb_A Beta C-S lyase, putativ 59.6 41 0.0014 33.7 10.0 102 453-561 80-188 (377)
64 3tnj_A Universal stress protei 59.2 88 0.003 27.0 11.8 59 502-564 81-147 (150)
65 1jmv_A USPA, universal stress 58.8 86 0.0029 26.8 10.9 58 501-564 73-138 (141)
66 2yv1_A Succinyl-COA ligase [AD 58.7 13 0.00044 38.2 6.0 107 454-562 70-180 (294)
67 1qyd_A Pinoresinol-lariciresin 58.5 42 0.0014 32.9 9.7 102 456-562 5-114 (313)
68 3f9t_A TDC, L-tyrosine decarbo 58.5 1.2E+02 0.0041 30.1 13.2 100 454-561 86-206 (397)
69 3l8a_A METC, putative aminotra 57.6 78 0.0027 32.7 11.9 101 454-561 119-232 (421)
70 2fr1_A Erythromycin synthase, 57.4 49 0.0017 36.0 10.8 112 452-565 223-361 (486)
71 3ruf_A WBGU; rossmann fold, UD 57.0 67 0.0023 32.1 11.0 109 454-565 24-151 (351)
72 1svv_A Threonine aldolase; str 56.8 33 0.0011 33.9 8.6 102 454-561 66-182 (359)
73 3fdx_A Putative filament prote 56.8 93 0.0032 26.5 10.7 36 522-562 106-142 (143)
74 1xr4_A Putative citrate lyase 56.7 47 0.0016 36.9 10.5 115 446-561 50-202 (509)
75 3tqr_A Phosphoribosylglycinami 56.6 27 0.00092 34.5 7.7 74 457-534 9-96 (215)
76 2ch1_A 3-hydroxykynurenine tra 56.3 53 0.0018 33.1 10.2 98 456-561 71-178 (396)
77 1vjo_A Alanine--glyoxylate ami 56.3 49 0.0017 33.4 10.0 98 456-561 87-194 (393)
78 4eb5_A Probable cysteine desul 56.2 1.6E+02 0.0055 29.1 14.1 97 455-558 61-170 (382)
79 3qli_A Coenzyme A transferase; 56.2 20 0.00069 39.4 7.3 96 445-541 29-159 (455)
80 1oi7_A Succinyl-COA synthetase 55.5 14 0.00047 37.9 5.6 107 454-562 64-174 (288)
81 1qyc_A Phenylcoumaran benzylic 55.4 33 0.0011 33.6 8.3 98 456-562 5-111 (308)
82 2gas_A Isoflavone reductase; N 55.4 35 0.0012 33.4 8.4 98 456-562 3-110 (307)
83 2bfw_A GLGA glycogen synthase; 55.2 49 0.0017 29.9 8.9 100 452-562 33-145 (200)
84 1k6d_A Acetate COA-transferase 55.0 39 0.0013 33.1 8.6 21 522-542 148-168 (220)
85 2yvq_A Carbamoyl-phosphate syn 54.8 50 0.0017 30.2 8.8 94 453-562 24-131 (143)
86 3isl_A Purine catabolism prote 54.6 1.7E+02 0.0059 29.4 13.8 98 457-562 64-172 (416)
87 1yaa_A Aspartate aminotransfer 54.6 80 0.0027 32.2 11.3 102 454-561 96-214 (412)
88 3kgw_A Alanine-glyoxylate amin 54.3 77 0.0026 31.6 10.9 97 457-561 77-183 (393)
89 3vax_A Putative uncharacterize 53.9 1.8E+02 0.0061 29.2 13.7 101 455-561 81-194 (400)
90 1y8q_A Ubiquitin-like 1 activa 53.6 1.8E+02 0.0061 30.3 13.9 108 444-562 26-156 (346)
91 2gn4_A FLAA1 protein, UDP-GLCN 53.5 39 0.0013 34.5 8.7 111 454-567 20-144 (344)
92 3etn_A Putative phosphosugar i 53.3 44 0.0015 32.3 8.6 37 493-529 121-159 (220)
93 2z61_A Probable aspartate amin 53.3 48 0.0016 33.3 9.2 97 454-561 89-188 (370)
94 3cai_A Possible aminotransfera 53.2 97 0.0033 31.3 11.6 101 455-561 87-200 (406)
95 2oas_A ATOA, 4-hydroxybutyrate 53.2 17 0.00056 39.6 6.0 97 446-542 10-130 (436)
96 3jtx_A Aminotransferase; NP_28 52.6 45 0.0016 33.7 9.0 105 452-561 88-206 (396)
97 1qgn_A Protein (cystathionine 52.6 83 0.0028 33.8 11.4 97 456-561 131-235 (445)
98 1lss_A TRK system potassium up 52.5 53 0.0018 28.0 8.2 90 455-561 4-99 (140)
99 2hj0_A Putative citrate lyase, 52.4 67 0.0023 35.8 10.9 115 447-561 54-205 (519)
100 3mt0_A Uncharacterized protein 52.3 1.8E+02 0.006 28.4 13.8 98 465-568 22-132 (290)
101 2e7j_A SEP-tRNA:Cys-tRNA synth 52.1 1.1E+02 0.0039 30.2 11.7 97 456-562 71-183 (371)
102 2r6j_A Eugenol synthase 1; phe 52.0 45 0.0015 33.0 8.7 96 457-562 13-113 (318)
103 1c7n_A Cystalysin; transferase 52.0 65 0.0022 32.6 10.0 101 454-561 89-202 (399)
104 2x5d_A Probable aminotransfera 51.8 45 0.0015 34.2 8.9 100 455-561 100-210 (412)
105 2bkw_A Alanine-glyoxylate amin 51.7 1.1E+02 0.0038 30.4 11.6 101 455-561 60-174 (385)
106 1d2f_A MALY protein; aminotran 51.6 70 0.0024 32.3 10.2 101 454-561 87-200 (390)
107 3kcq_A Phosphoribosylglycinami 51.6 23 0.0008 34.9 6.3 74 457-534 12-95 (215)
108 2nvv_A Acetyl-COA hydrolase/tr 51.3 47 0.0016 36.8 9.4 96 446-542 9-139 (506)
109 1lc5_A COBD, L-threonine-O-3-p 51.2 64 0.0022 32.3 9.8 98 455-561 77-184 (364)
110 2dum_A Hypothetical protein PH 51.2 31 0.0011 30.9 6.7 61 500-564 86-156 (170)
111 3ab8_A Putative uncharacterize 51.0 79 0.0027 30.3 10.1 84 472-562 176-267 (268)
112 2g39_A Acetyl-COA hydrolase; c 50.6 61 0.0021 35.9 10.1 95 446-542 19-144 (497)
113 2q7w_A Aspartate aminotransfer 50.6 1E+02 0.0034 31.1 11.2 104 454-561 92-210 (396)
114 1vp4_A Aminotransferase, putat 50.5 68 0.0023 33.2 10.1 102 454-561 109-226 (425)
115 2z9v_A Aspartate aminotransfer 50.4 1E+02 0.0035 30.9 11.2 99 455-561 60-169 (392)
116 1nri_A Hypothetical protein HI 50.4 1.6E+02 0.0056 29.8 12.8 55 493-549 155-212 (306)
117 2zc0_A Alanine glyoxylate tran 50.3 55 0.0019 33.3 9.2 101 454-561 98-213 (407)
118 3c1o_A Eugenol synthase; pheny 50.3 55 0.0019 32.3 9.0 98 456-562 5-111 (321)
119 1x92_A APC5045, phosphoheptose 50.2 1.6E+02 0.0054 27.3 13.4 36 494-529 129-167 (199)
120 3mad_A Sphingosine-1-phosphate 50.1 44 0.0015 35.9 8.8 99 458-563 164-276 (514)
121 1zud_1 Adenylyltransferase THI 49.9 1.1E+02 0.0039 30.1 11.2 109 444-563 18-150 (251)
122 4egb_A DTDP-glucose 4,6-dehydr 49.8 29 0.00098 34.8 6.9 110 454-565 23-149 (346)
123 2xhz_A KDSD, YRBH, arabinose 5 49.8 95 0.0033 28.3 10.0 38 493-530 111-148 (183)
124 3loq_A Universal stress protei 49.7 1.3E+02 0.0046 29.2 11.7 104 457-564 173-290 (294)
125 3hdj_A Probable ornithine cycl 49.6 70 0.0024 32.9 9.9 88 453-546 119-215 (313)
126 3lk7_A UDP-N-acetylmuramoylala 49.5 37 0.0013 36.4 8.1 92 454-560 8-100 (451)
127 2yv2_A Succinyl-COA synthetase 49.4 14 0.00049 37.9 4.6 106 455-562 72-181 (297)
128 3acz_A Methionine gamma-lyase; 49.4 64 0.0022 33.2 9.6 98 456-561 76-179 (389)
129 2ctz_A O-acetyl-L-homoserine s 49.1 58 0.002 34.1 9.4 97 456-561 75-179 (421)
130 2cb1_A O-acetyl homoserine sul 49.0 56 0.0019 33.9 9.2 98 456-561 73-175 (412)
131 4gqb_A Protein arginine N-meth 49.0 22 0.00075 40.7 6.4 69 456-527 359-433 (637)
132 2nu8_A Succinyl-COA ligase [AD 48.9 14 0.00049 37.7 4.4 106 454-561 64-173 (288)
133 3ndn_A O-succinylhomoserine su 48.8 57 0.002 34.4 9.3 97 456-561 98-201 (414)
134 3ilh_A Two component response 48.6 61 0.0021 27.3 7.9 57 457-513 37-100 (146)
135 3cwc_A Putative glycerate kina 48.6 14 0.00048 39.8 4.5 62 492-567 269-330 (383)
136 1mjh_A Protein (ATP-binding do 48.6 53 0.0018 29.0 7.8 60 500-563 91-158 (162)
137 2wm3_A NMRA-like family domain 48.4 47 0.0016 32.5 8.1 108 455-566 5-116 (299)
138 3dhn_A NAD-dependent epimerase 48.1 41 0.0014 31.4 7.3 100 456-565 5-112 (227)
139 3fwz_A Inner membrane protein 47.8 70 0.0024 28.2 8.4 93 455-564 7-106 (140)
140 3cis_A Uncharacterized protein 47.5 1.6E+02 0.0055 29.0 11.9 59 505-567 100-164 (309)
141 2h1q_A Hypothetical protein; Z 47.3 31 0.0011 35.3 6.6 89 453-571 139-227 (270)
142 3dfz_A SIRC, precorrin-2 dehyd 47.3 15 0.0005 36.5 4.1 93 454-563 30-122 (223)
143 1m32_A 2-aminoethylphosphonate 47.3 96 0.0033 30.5 10.2 98 456-561 58-166 (366)
144 2yva_A DNAA initiator-associat 47.1 1.7E+02 0.0059 26.8 13.0 35 495-529 126-163 (196)
145 2g1u_A Hypothetical protein TM 47.0 62 0.0021 28.9 8.1 94 452-562 16-116 (155)
146 2ahu_A Putative enzyme YDIF; C 46.9 1.7E+02 0.0058 32.5 13.1 43 522-564 180-227 (531)
147 2dou_A Probable N-succinyldiam 46.9 1E+02 0.0035 30.9 10.5 99 456-561 89-196 (376)
148 3qhx_A Cystathionine gamma-syn 46.8 74 0.0025 32.9 9.7 97 456-561 83-186 (392)
149 3zrp_A Serine-pyruvate aminotr 46.8 81 0.0028 31.3 9.6 97 456-561 56-162 (384)
150 1jkx_A GART;, phosphoribosylgl 46.7 48 0.0016 32.4 7.7 74 457-534 4-92 (212)
151 3fxa_A SIS domain protein; str 46.6 1.1E+02 0.0036 28.6 9.9 36 494-529 108-143 (201)
152 4e4t_A Phosphoribosylaminoimid 46.6 23 0.00077 37.8 5.8 77 451-533 31-107 (419)
153 2yrr_A Aminotransferase, class 46.5 60 0.002 31.8 8.5 96 456-561 54-159 (353)
154 2hmt_A YUAA protein; RCK, KTN, 45.9 61 0.0021 27.6 7.5 92 455-562 6-102 (144)
155 4dik_A Flavoprotein; TM0755, e 45.9 2.8E+02 0.0096 29.5 14.2 69 497-568 286-363 (410)
156 2okj_A Glutamate decarboxylase 45.9 1.6E+02 0.0055 31.4 12.4 103 454-561 151-280 (504)
157 2rfv_A Methionine gamma-lyase; 45.8 1.1E+02 0.0039 31.1 10.9 98 456-561 81-184 (398)
158 3nra_A Aspartate aminotransfer 45.7 73 0.0025 32.2 9.2 100 455-561 103-217 (407)
159 2ord_A Acoat, acetylornithine 45.6 1.7E+02 0.0059 29.5 12.1 33 454-487 97-135 (397)
160 1x87_A Urocanase protein; stru 45.2 74 0.0025 35.5 9.4 113 374-490 211-365 (551)
161 2lpm_A Two-component response 45.1 29 0.001 30.9 5.4 78 478-564 6-87 (123)
162 3ftb_A Histidinol-phosphate am 45.0 60 0.002 32.2 8.3 98 454-562 78-183 (361)
163 3ua3_A Protein arginine N-meth 45.0 46 0.0016 38.8 8.2 86 441-528 393-501 (745)
164 2ay1_A Aroat, aromatic amino a 45.0 1.1E+02 0.0037 30.9 10.4 102 454-561 89-207 (394)
165 1ydm_A Hypothetical protein YQ 44.8 62 0.0021 30.8 8.0 104 440-546 24-139 (187)
166 2aef_A Calcium-gated potassium 44.6 31 0.001 33.1 5.9 90 455-563 9-103 (234)
167 1ajs_A Aspartate aminotransfer 44.5 1.3E+02 0.0044 30.6 11.0 105 453-561 96-221 (412)
168 2xbl_A Phosphoheptose isomeras 44.3 1.9E+02 0.0065 26.5 12.3 36 493-528 131-166 (198)
169 3olq_A Universal stress protei 44.0 2.4E+02 0.0082 27.6 12.8 98 465-566 22-152 (319)
170 3e48_A Putative nucleoside-dip 43.8 30 0.001 33.7 5.8 102 457-566 2-107 (289)
171 1tq8_A Hypothetical protein RV 43.4 1.3E+02 0.0044 27.0 9.6 61 499-563 88-157 (163)
172 1xr4_A Putative citrate lyase 43.3 3.2E+02 0.011 30.2 14.5 150 441-641 250-452 (509)
173 4f4e_A Aromatic-amino-acid ami 43.0 1.2E+02 0.0041 31.2 10.5 100 456-561 119-233 (420)
174 3k6m_A Succinyl-COA:3-ketoacid 43.0 35 0.0012 37.7 6.7 97 440-542 262-374 (481)
175 1e5e_A MGL, methionine gamma-l 43.0 1.6E+02 0.0055 30.4 11.6 98 456-561 79-183 (404)
176 2i2w_A Phosphoheptose isomeras 42.9 2.2E+02 0.0075 26.8 12.3 35 494-528 147-181 (212)
177 1n8p_A Cystathionine gamma-lya 42.6 62 0.0021 33.5 8.3 97 456-561 72-177 (393)
178 2z5l_A Tylkr1, tylactone synth 42.6 1E+02 0.0034 33.9 10.3 112 452-565 256-391 (511)
179 3cvj_A Putative phosphoheptose 42.6 1.3E+02 0.0045 29.0 10.2 36 493-528 123-169 (243)
180 1gd9_A Aspartate aminotransfer 42.3 93 0.0032 31.3 9.4 102 453-561 85-198 (389)
181 3da8_A Probable 5'-phosphoribo 42.2 40 0.0014 33.2 6.3 74 457-534 16-102 (215)
182 1id1_A Putative potassium chan 42.1 1.2E+02 0.004 26.9 9.0 99 455-565 3-107 (153)
183 2jl1_A Triphenylmethane reduct 41.5 66 0.0022 31.1 7.8 102 457-565 2-107 (287)
184 3fsl_A Aromatic-amino-acid ami 41.5 1.9E+02 0.0067 28.9 11.7 100 456-561 97-211 (397)
185 1lnq_A MTHK channels, potassiu 41.3 43 0.0015 34.0 6.7 91 455-564 115-210 (336)
186 2fq6_A Cystathionine beta-lyas 41.3 56 0.0019 34.6 7.8 98 456-562 99-205 (415)
187 3q2o_A Phosphoribosylaminoimid 41.0 8.3 0.00028 40.3 1.2 76 451-532 10-85 (389)
188 1u08_A Hypothetical aminotrans 40.8 1.6E+02 0.0054 29.6 10.9 99 456-561 93-201 (386)
189 2o1b_A Aminotransferase, class 40.7 1E+02 0.0035 31.6 9.6 100 455-561 110-219 (404)
190 3s2u_A UDP-N-acetylglucosamine 40.6 1.7E+02 0.006 29.9 11.3 92 455-562 180-278 (365)
191 3uwc_A Nucleotide-sugar aminot 40.4 62 0.0021 32.4 7.6 96 451-562 50-158 (374)
192 3a2b_A Serine palmitoyltransfe 40.2 2E+02 0.0069 28.9 11.6 96 456-561 105-208 (398)
193 3nnk_A Ureidoglycine-glyoxylat 40.2 2E+02 0.0067 28.9 11.5 99 455-561 64-173 (411)
194 2fp4_A Succinyl-COA ligase [GD 40.2 31 0.001 35.6 5.4 107 454-562 71-182 (305)
195 1j32_A Aspartate aminotransfer 40.0 77 0.0026 31.9 8.3 102 454-562 90-202 (388)
196 1iay_A ACC synthase 2, 1-amino 40.0 1.1E+02 0.0037 31.5 9.6 103 452-561 106-226 (428)
197 1sb8_A WBPP; epimerase, 4-epim 39.9 1.4E+02 0.0049 29.8 10.3 109 454-565 26-153 (352)
198 3e2y_A Kynurenine-oxoglutarate 39.6 1.1E+02 0.0036 31.1 9.3 100 455-561 86-205 (410)
199 1o1y_A Conserved hypothetical 39.4 25 0.00085 34.6 4.4 86 478-564 10-101 (239)
200 1uwk_A Urocanate hydratase; hy 39.3 74 0.0025 35.6 8.3 113 374-490 216-370 (557)
201 1elu_A L-cysteine/L-cystine C- 39.2 3E+02 0.01 27.3 12.6 99 455-561 77-193 (390)
202 3olq_A Universal stress protei 39.2 1.6E+02 0.0055 28.9 10.4 62 499-564 235-305 (319)
203 4id9_A Short-chain dehydrogena 39.1 57 0.002 32.5 7.1 99 454-565 18-126 (347)
204 3dyd_A Tyrosine aminotransfera 39.0 72 0.0025 33.1 8.1 102 453-561 117-229 (427)
205 2zyj_A Alpha-aminodipate amino 39.0 96 0.0033 31.4 8.9 102 454-561 91-201 (397)
206 3ri6_A O-acetylhomoserine sulf 38.9 1.8E+02 0.0061 30.9 11.3 97 457-561 100-202 (430)
207 3ia7_A CALG4; glycosysltransfe 38.9 73 0.0025 32.0 7.9 22 547-568 115-136 (402)
208 4gud_A Imidazole glycerol phos 38.9 21 0.00073 33.9 3.7 74 482-565 4-81 (211)
209 4eu9_A Succinyl-COA:acetate co 38.7 1.3E+02 0.0045 33.1 10.5 96 445-540 17-146 (514)
210 3rsc_A CALG2; TDP, enediyne, s 38.6 78 0.0027 32.3 8.2 22 547-568 131-152 (415)
211 2fkn_A Urocanate hydratase; ro 37.9 74 0.0025 35.5 8.0 113 374-490 212-366 (552)
212 3cdk_A Succinyl-COA:3-ketoacid 37.8 1.5E+02 0.0051 29.4 9.8 44 522-571 151-198 (241)
213 1i4n_A Indole-3-glycerol phosp 37.6 23 0.00078 35.9 3.8 43 525-567 119-161 (251)
214 3ly1_A Putative histidinol-pho 37.4 93 0.0032 30.8 8.4 98 454-561 68-178 (354)
215 2bwn_A 5-aminolevulinate synth 37.3 3.3E+02 0.011 27.3 13.4 72 482-561 134-213 (401)
216 3cog_A Cystathionine gamma-lya 37.2 1.2E+02 0.0042 31.4 9.6 97 456-561 84-187 (403)
217 4gek_A TRNA (CMO5U34)-methyltr 37.0 79 0.0027 31.3 7.7 83 441-527 57-144 (261)
218 1yiz_A Kynurenine aminotransfe 36.9 1.3E+02 0.0046 30.7 9.7 102 453-561 99-220 (429)
219 1cs1_A CGS, protein (cystathio 36.6 2.7E+02 0.0093 28.1 11.9 97 456-561 69-172 (386)
220 1v2d_A Glutamine aminotransfer 36.5 1.8E+02 0.0063 29.1 10.5 100 455-561 79-190 (381)
221 2r5f_A Transcriptional regulat 36.4 73 0.0025 31.9 7.4 99 445-545 48-174 (264)
222 4ggj_A Mitochondrial cardiolip 36.2 42 0.0015 32.0 5.3 55 458-513 64-119 (196)
223 3auf_A Glycinamide ribonucleot 36.1 98 0.0034 30.6 8.1 74 458-534 27-114 (229)
224 1meo_A Phosophoribosylglycinam 36.1 76 0.0026 31.0 7.2 70 457-530 4-87 (209)
225 1hdo_A Biliverdin IX beta redu 36.0 60 0.0021 29.4 6.2 103 456-566 4-112 (206)
226 1gc0_A Methionine gamma-lyase; 35.9 1.6E+02 0.0054 30.2 10.1 97 456-561 82-185 (398)
227 2pln_A HP1043, response regula 35.6 1.4E+02 0.0049 24.9 8.2 78 477-566 15-96 (137)
228 3mt0_A Uncharacterized protein 35.6 2.5E+02 0.0085 27.3 11.0 61 500-564 207-276 (290)
229 3gpi_A NAD-dependent epimerase 35.4 31 0.0011 33.6 4.4 51 516-566 56-110 (286)
230 2dgk_A GAD-beta, GADB, glutama 35.3 2.8E+02 0.0094 28.9 12.0 97 457-561 106-228 (452)
231 3cg0_A Response regulator rece 35.1 1.3E+02 0.0043 25.1 7.7 82 478-566 7-92 (140)
232 4dqv_A Probable peptide synthe 35.1 1.2E+02 0.0042 32.4 9.3 110 454-565 72-214 (478)
233 1xq6_A Unknown protein; struct 35.1 1.4E+02 0.0049 27.7 8.9 106 454-565 3-133 (253)
234 3rht_A (gatase1)-like protein; 35.0 26 0.00089 35.6 3.7 82 481-569 5-92 (259)
235 2zcu_A Uncharacterized oxidore 34.7 90 0.0031 30.0 7.5 99 458-565 2-104 (286)
236 3nhm_A Response regulator; pro 34.6 1.6E+02 0.0054 24.3 8.3 57 453-514 25-86 (133)
237 3nmy_A Xometc, cystathionine g 34.6 1.4E+02 0.0049 31.1 9.6 96 456-561 84-187 (400)
238 1fc4_A 2-amino-3-ketobutyrate 34.6 2.7E+02 0.0094 27.9 11.5 96 456-561 107-212 (401)
239 3ec7_A Putative dehydrogenase; 34.6 2.5E+02 0.0087 28.7 11.4 113 456-572 24-154 (357)
240 3npg_A Uncharacterized DUF364 34.5 87 0.003 31.5 7.5 95 453-574 114-208 (249)
241 3ez1_A Aminotransferase MOCR f 34.5 1.1E+02 0.0038 31.3 8.6 106 452-561 85-212 (423)
242 3h2s_A Putative NADH-flavin re 34.4 62 0.0021 30.0 6.1 99 457-563 2-104 (224)
243 1mio_B Nitrogenase molybdenum 34.4 4.6E+02 0.016 28.1 15.0 94 454-563 311-410 (458)
244 3ke3_A Putative serine-pyruvat 34.4 3.8E+02 0.013 27.0 13.4 99 457-562 54-174 (379)
245 2o0r_A RV0858C (N-succinyldiam 34.4 2E+02 0.0067 29.3 10.4 99 456-561 88-198 (411)
246 1o4s_A Aspartate aminotransfer 34.0 1.6E+02 0.0055 29.8 9.7 101 454-561 101-212 (389)
247 1gy8_A UDP-galactose 4-epimera 33.5 1.4E+02 0.0048 30.3 9.1 109 455-565 2-144 (397)
248 3m2p_A UDP-N-acetylglucosamine 33.4 1.5E+02 0.0053 29.0 9.1 99 456-564 3-108 (311)
249 3aow_A Putative uncharacterize 33.3 1.3E+02 0.0044 31.7 9.0 102 454-561 140-255 (448)
250 3asa_A LL-diaminopimelate amin 32.9 1E+02 0.0035 31.4 8.0 101 453-561 94-201 (400)
251 2z1d_A Hydrogenase expression/ 32.7 61 0.0021 34.7 6.2 49 510-562 178-226 (372)
252 3i16_A Aluminum resistance pro 32.7 98 0.0033 33.1 8.0 97 460-562 97-218 (427)
253 1iz0_A Quinone oxidoreductase; 32.5 2.3E+02 0.0079 27.9 10.4 53 452-511 123-176 (302)
254 3ele_A Amino transferase; RER0 32.4 2E+02 0.0069 28.9 10.1 103 453-561 98-216 (398)
255 3p9x_A Phosphoribosylglycinami 32.4 81 0.0028 31.0 6.7 74 457-534 6-94 (211)
256 1byr_A Protein (endonuclease); 32.2 1.1E+02 0.0037 27.0 7.1 54 458-511 32-87 (155)
257 4adb_A Succinylornithine trans 32.1 3.3E+02 0.011 27.3 11.6 102 455-561 97-222 (406)
258 2wsi_A FAD synthetase; transfe 32.1 3.1E+02 0.011 27.9 11.4 89 444-532 41-167 (306)
259 1bw0_A TAT, protein (tyrosine 31.9 1.8E+02 0.0062 29.5 9.7 102 453-561 103-215 (416)
260 3t6k_A Response regulator rece 31.9 2E+02 0.0069 24.1 8.6 79 480-566 4-88 (136)
261 3roj_A D-fructose 1,6-bisphosp 31.8 90 0.0031 33.4 7.2 45 474-521 193-240 (379)
262 3mz0_A Inositol 2-dehydrogenas 31.7 2.3E+02 0.0079 28.6 10.4 111 457-572 4-133 (344)
263 3frk_A QDTB; aminotransferase, 31.7 67 0.0023 32.3 6.3 95 455-561 52-156 (373)
264 3cis_A Uncharacterized protein 31.7 3.8E+02 0.013 26.2 12.8 57 504-564 244-306 (309)
265 2qzj_A Two-component response 31.7 1.9E+02 0.0066 24.3 8.5 79 480-566 4-85 (136)
266 3hvy_A Cystathionine beta-lyas 31.6 90 0.0031 33.4 7.5 96 460-562 98-218 (427)
267 3tqx_A 2-amino-3-ketobutyrate 31.5 2.4E+02 0.0081 28.2 10.3 96 456-561 105-210 (399)
268 3ruy_A Ornithine aminotransfer 31.5 2.3E+02 0.008 28.4 10.3 105 454-561 93-221 (392)
269 1tk9_A Phosphoheptose isomeras 31.5 2.9E+02 0.01 24.9 11.3 36 493-528 125-160 (188)
270 3eod_A Protein HNR; response r 31.5 1.9E+02 0.0064 23.8 8.2 80 479-566 6-89 (130)
271 1pff_A Methionine gamma-lyase; 31.2 1.5E+02 0.0051 29.1 8.6 98 456-561 15-119 (331)
272 3st7_A Capsular polysaccharide 30.8 1.1E+02 0.0037 31.0 7.7 44 515-558 39-86 (369)
273 7aat_A Aspartate aminotransfer 30.8 2E+02 0.0067 29.1 9.7 55 454-512 94-151 (401)
274 2r2n_A Kynurenine/alpha-aminoa 30.7 2.6E+02 0.0091 28.7 10.8 52 455-512 109-160 (425)
275 3oy2_A Glycosyltransferase B73 30.7 90 0.0031 31.6 7.1 99 454-562 183-303 (413)
276 3orq_A N5-carboxyaminoimidazol 30.5 36 0.0012 35.4 4.1 71 452-532 9-83 (377)
277 2o0m_A Transcriptional regulat 30.4 61 0.0021 33.6 5.8 90 443-533 126-246 (345)
278 3enk_A UDP-glucose 4-epimerase 30.3 2.9E+02 0.0098 27.2 10.6 109 454-565 4-129 (341)
279 3av3_A Phosphoribosylglycinami 30.3 1.3E+02 0.0046 29.1 7.9 71 457-530 7-90 (212)
280 3osu_A 3-oxoacyl-[acyl-carrier 30.2 1.1E+02 0.0036 29.4 7.2 105 455-562 4-138 (246)
281 3nbm_A PTS system, lactose-spe 30.2 23 0.00079 31.2 2.2 55 501-564 30-86 (108)
282 1orr_A CDP-tyvelose-2-epimeras 29.9 54 0.0018 32.5 5.1 104 457-563 3-123 (347)
283 3kcn_A Adenylate cyclase homol 29.9 50 0.0017 28.5 4.3 58 453-514 25-85 (151)
284 1v4v_A UDP-N-acetylglucosamine 29.8 3.4E+02 0.012 26.9 11.2 69 477-562 227-299 (376)
285 3qp9_A Type I polyketide synth 29.8 1.5E+02 0.0051 32.6 9.1 113 451-565 247-402 (525)
286 1qg8_A Protein (spore coat pol 29.7 1.3E+02 0.0045 28.2 7.6 55 457-512 6-61 (255)
287 3mc6_A Sphingosine-1-phosphate 29.5 1.3E+02 0.0045 31.7 8.4 102 454-562 126-242 (497)
288 1zh2_A KDP operon transcriptio 29.4 2.1E+02 0.0072 22.9 8.0 78 481-566 2-82 (121)
289 4a6r_A Omega transaminase; tra 29.3 3.7E+02 0.013 28.1 11.8 21 456-476 113-133 (459)
290 2ejb_A Probable aromatic acid 29.3 1.3E+02 0.0043 29.0 7.4 20 469-488 19-38 (189)
291 1e6u_A GDP-fucose synthetase; 29.2 1.2E+02 0.004 29.8 7.4 26 541-566 83-108 (321)
292 1zgz_A Torcad operon transcrip 29.1 2.1E+02 0.0072 23.1 8.0 78 481-566 3-83 (122)
293 3g7q_A Valine-pyruvate aminotr 29.0 63 0.0021 32.9 5.5 107 452-561 96-218 (417)
294 1g0o_A Trihydroxynaphthalene r 29.0 1.6E+02 0.0055 28.7 8.4 99 454-555 28-152 (283)
295 3nzo_A UDP-N-acetylglucosamine 28.7 1.8E+02 0.0061 30.3 9.1 109 455-565 35-165 (399)
296 3tcm_A Alanine aminotransferas 28.7 2.8E+02 0.0095 29.6 10.8 103 453-561 156-275 (500)
297 3lou_A Formyltetrahydrofolate 28.3 1.5E+02 0.005 30.5 8.1 73 457-535 99-185 (292)
298 3ew7_A LMO0794 protein; Q8Y8U8 28.2 1.1E+02 0.0036 28.1 6.5 98 457-564 2-102 (221)
299 1bs0_A Protein (8-amino-7-oxon 28.1 3E+02 0.01 27.4 10.4 97 456-561 101-203 (384)
300 3jyo_A Quinate/shikimate dehyd 28.1 2.4E+02 0.008 28.5 9.6 72 454-527 126-199 (283)
301 3big_A Fructose-1,6-bisphospha 28.1 98 0.0033 32.7 6.7 46 473-521 148-196 (338)
302 3oks_A 4-aminobutyrate transam 28.0 2.9E+02 0.01 28.9 10.7 103 456-561 124-266 (451)
303 3gk7_A 4-hydroxybutyrate COA-t 27.9 1.1E+02 0.0039 33.3 7.6 95 446-541 15-134 (448)
304 3b46_A Aminotransferase BNA3; 27.9 1.2E+02 0.0042 31.6 7.7 52 455-512 119-170 (447)
305 3trj_A Phosphoheptose isomeras 27.7 3.9E+02 0.013 25.1 11.8 36 493-528 129-167 (201)
306 2ywr_A Phosphoribosylglycinami 27.7 1.9E+02 0.0067 28.0 8.6 74 458-534 6-93 (216)
307 3f0h_A Aminotransferase; RER07 27.7 2.3E+02 0.0077 28.1 9.3 98 456-561 72-179 (376)
308 3ffh_A Histidinol-phosphate am 27.6 1.3E+02 0.0044 29.9 7.5 98 454-561 84-192 (363)
309 3sho_A Transcriptional regulat 27.5 3.5E+02 0.012 24.5 11.2 90 445-565 29-123 (187)
310 3rss_A Putative uncharacterize 27.4 4.5E+02 0.015 28.9 12.3 114 440-561 35-157 (502)
311 2jis_A Cysteine sulfinic acid 27.3 4.8E+02 0.017 27.7 12.5 103 454-563 165-296 (515)
312 2zay_A Response regulator rece 27.2 1.7E+02 0.0057 24.7 7.2 82 478-567 6-93 (147)
313 1b93_A Protein (methylglyoxal 27.2 2.9E+02 0.0098 25.9 9.2 102 455-567 12-124 (152)
314 1fmc_A 7 alpha-hydroxysteroid 27.2 3.7E+02 0.013 25.1 10.4 107 454-564 10-145 (255)
315 2w8t_A SPT, serine palmitoyltr 27.2 5.2E+02 0.018 26.4 12.8 95 456-561 126-229 (427)
316 3ppl_A Aspartate aminotransfer 27.1 2.7E+02 0.0093 28.5 10.1 99 452-561 93-220 (427)
317 3i4j_A Aminotransferase, class 27.1 2.8E+02 0.0095 28.4 10.2 22 455-476 90-111 (430)
318 1b5p_A Protein (aspartate amin 27.1 1.9E+02 0.0064 29.2 8.7 100 455-561 92-202 (385)
319 2ri0_A Glucosamine-6-phosphate 27.0 1.6E+02 0.0056 28.3 7.9 91 447-541 20-134 (234)
320 3eh7_A 4-hydroxybutyrate COA-t 27.0 1.1E+02 0.0038 33.1 7.3 95 446-541 19-138 (434)
321 3rq1_A Aminotransferase class 27.0 2.7E+02 0.0093 28.2 10.0 100 456-561 104-224 (418)
322 1smk_A Malate dehydrogenase, g 26.9 2.3E+02 0.008 28.9 9.5 99 456-557 9-117 (326)
323 3jvi_A Protein tyrosine phosph 26.8 71 0.0024 29.7 5.0 73 457-529 6-90 (161)
324 1xi9_A Putative transaminase; 26.6 2.8E+02 0.0097 28.1 10.0 100 455-561 102-212 (406)
325 1ek6_A UDP-galactose 4-epimera 26.5 3E+02 0.01 27.2 9.9 107 456-565 3-132 (348)
326 1tt5_A APPBP1, amyloid protein 26.2 5.1E+02 0.017 28.7 12.6 108 444-562 22-155 (531)
327 1f0k_A MURG, UDP-N-acetylgluco 26.2 3.6E+02 0.012 26.5 10.5 66 480-562 212-280 (364)
328 1vl0_A DTDP-4-dehydrorhamnose 26.2 1E+02 0.0035 29.8 6.3 25 540-564 89-113 (292)
329 2ydy_A Methionine adenosyltran 26.2 1.6E+02 0.0055 28.7 7.8 100 455-566 2-112 (315)
330 3fwk_A FMN adenylyltransferase 25.9 5.7E+02 0.02 26.5 12.6 90 444-533 46-171 (308)
331 3jzl_A Putative cystathionine 25.9 1.4E+02 0.0048 31.6 7.7 95 461-562 84-201 (409)
332 1fg7_A Histidinol phosphate am 25.9 1.3E+02 0.0045 30.2 7.2 53 455-512 76-128 (356)
333 3lec_A NADB-rossmann superfami 25.8 96 0.0033 30.8 6.0 77 448-528 15-96 (230)
334 3rft_A Uronate dehydrogenase; 25.7 1.1E+02 0.0037 29.7 6.4 99 455-565 3-111 (267)
335 1qkk_A DCTD, C4-dicarboxylate 25.7 1.7E+02 0.0058 25.0 7.1 80 479-566 2-85 (155)
336 4hvk_A Probable cysteine desul 25.6 4.7E+02 0.016 25.4 15.5 98 456-561 62-172 (382)
337 2rjn_A Response regulator rece 25.6 2E+02 0.0068 24.6 7.5 80 479-566 6-89 (154)
338 3tsa_A SPNG, NDP-rhamnosyltran 25.5 1.6E+02 0.0056 29.5 7.9 20 546-565 125-144 (391)
339 2qxy_A Response regulator; reg 25.3 1.6E+02 0.0054 24.7 6.7 78 480-566 4-85 (142)
340 3hzh_A Chemotaxis response reg 25.1 1.8E+02 0.0062 25.1 7.2 81 478-566 34-121 (157)
341 3e9k_A Kynureninase; kynurenin 25.1 2E+02 0.0067 30.1 8.6 102 454-561 128-249 (465)
342 3a9z_A Selenocysteine lyase; P 25.0 5.5E+02 0.019 26.0 12.4 20 455-474 79-98 (432)
343 2hq1_A Glucose/ribitol dehydro 24.8 3.7E+02 0.013 25.0 9.9 75 454-530 4-91 (247)
344 3eag_A UDP-N-acetylmuramate:L- 24.8 2.4E+02 0.0083 28.6 9.0 89 456-561 5-95 (326)
345 1pjq_A CYSG, siroheme synthase 24.8 1.4E+02 0.0049 32.1 7.6 95 454-565 11-106 (457)
346 2fnu_A Aminotransferase; prote 24.8 1.3E+02 0.0044 29.9 6.9 94 456-561 49-153 (375)
347 4ffc_A 4-aminobutyrate aminotr 24.6 2.6E+02 0.009 29.3 9.6 104 456-561 127-264 (453)
348 4b4o_A Epimerase family protei 24.6 1.6E+02 0.0056 28.6 7.5 19 541-559 82-100 (298)
349 3fpf_A Mtnas, putative unchara 24.6 4.3E+02 0.015 27.2 10.8 75 451-530 119-196 (298)
350 3sc6_A DTDP-4-dehydrorhamnose 24.6 55 0.0019 31.7 4.0 26 540-565 82-107 (287)
351 3slg_A PBGP3 protein; structur 24.3 56 0.0019 33.0 4.1 104 455-564 24-141 (372)
352 4dzr_A Protein-(glutamine-N5) 24.3 84 0.0029 28.5 5.0 72 453-528 29-107 (215)
353 2egx_A Putative acetylglutamat 24.0 5.3E+02 0.018 25.4 12.2 46 516-561 143-188 (269)
354 3two_A Mannitol dehydrogenase; 24.0 1.1E+02 0.0039 31.0 6.4 53 451-510 173-225 (348)
355 2gb3_A Aspartate aminotransfer 23.8 1.1E+02 0.0039 31.2 6.4 100 455-561 103-212 (409)
356 1omo_A Alanine dehydrogenase; 23.8 3.5E+02 0.012 27.5 10.1 74 453-531 123-196 (322)
357 3m6m_D Sensory/regulatory prot 23.8 1.5E+02 0.0052 25.3 6.4 79 479-565 13-99 (143)
358 2iss_D Glutamine amidotransfer 23.7 93 0.0032 29.5 5.3 81 478-567 18-102 (208)
359 3t18_A Aminotransferase class 23.7 3.2E+02 0.011 27.7 9.7 100 456-561 103-223 (413)
360 3l4e_A Uncharacterized peptida 23.7 98 0.0034 29.9 5.5 109 458-566 5-124 (206)
361 3mje_A AMPHB; rossmann fold, o 23.7 2.9E+02 0.01 30.2 9.9 109 456-565 240-375 (496)
362 2oga_A Transaminase; PLP-depen 23.7 2.9E+02 0.0099 28.0 9.5 93 456-561 80-183 (399)
363 2ggs_A 273AA long hypothetical 23.6 84 0.0029 30.0 5.0 97 457-565 2-108 (273)
364 4fzr_A SSFS6; structural genom 23.6 1.3E+02 0.0044 30.6 6.7 36 469-512 34-69 (398)
365 1vef_A Acetylornithine/acetyl- 23.5 4.2E+02 0.014 26.5 10.6 100 455-561 105-224 (395)
366 3ip3_A Oxidoreductase, putativ 23.5 1.4E+02 0.0048 30.2 7.0 113 457-572 4-135 (337)
367 3fbg_A Putative arginate lyase 23.4 2.3E+02 0.0079 28.7 8.6 52 454-512 150-202 (346)
368 3n0v_A Formyltetrahydrofolate 23.3 1.8E+02 0.0063 29.6 7.7 73 457-535 94-180 (286)
369 2cy8_A D-phgat, D-phenylglycin 23.3 3E+02 0.01 28.5 9.6 103 455-561 114-240 (453)
370 1qv9_A F420-dependent methylen 23.2 2.2E+02 0.0075 29.1 7.9 49 466-515 52-101 (283)
371 3uog_A Alcohol dehydrogenase; 23.1 2.7E+02 0.0092 28.4 9.1 54 451-511 186-239 (363)
372 2r25_B Osmosensing histidine p 23.0 1.9E+02 0.0064 24.2 6.7 57 457-513 29-89 (133)
373 2j48_A Two-component sensor ki 22.9 2.4E+02 0.0081 22.1 7.0 77 482-566 3-85 (119)
374 2pb2_A Acetylornithine/succiny 22.9 5.3E+02 0.018 26.4 11.4 102 455-561 115-240 (420)
375 3dr4_A Putative perosamine syn 22.8 1.9E+02 0.0065 29.1 7.8 89 456-561 73-176 (391)
376 2ez2_A Beta-tyrosinase, tyrosi 22.8 3.2E+02 0.011 28.2 9.7 17 545-561 197-213 (456)
377 3ps9_A TRNA 5-methylaminomethy 22.8 1.5E+02 0.0052 33.1 7.7 65 447-513 204-303 (676)
378 3op7_A Aminotransferase class 22.7 1.7E+02 0.0058 29.2 7.3 100 455-561 82-192 (375)
379 4da9_A Short-chain dehydrogena 22.6 3.1E+02 0.011 26.8 9.1 76 454-531 28-116 (280)
380 3kr9_A SAM-dependent methyltra 22.6 1.3E+02 0.0044 29.6 6.2 77 448-528 9-90 (225)
381 1pno_A NAD(P) transhydrogenase 22.5 2.5E+02 0.0084 27.2 7.7 82 449-531 17-108 (180)
382 3j20_M 30S ribosomal protein S 22.2 1.5E+02 0.0051 27.5 6.1 49 466-514 63-118 (137)
383 3icc_A Putative 3-oxoacyl-(acy 22.2 2.8E+02 0.0095 26.1 8.4 99 454-555 6-136 (255)
384 3vps_A TUNA, NAD-dependent epi 22.1 87 0.003 30.5 4.9 26 541-566 95-120 (321)
385 3fg9_A Protein of universal st 22.0 3.8E+02 0.013 23.1 10.2 37 522-562 119-155 (156)
386 3ijr_A Oxidoreductase, short c 22.0 5.7E+02 0.019 25.0 11.2 100 454-555 46-171 (291)
387 3kht_A Response regulator; PSI 22.0 2.3E+02 0.0079 23.7 7.1 80 479-566 4-91 (144)
388 3ilh_A Two component response 21.9 3.4E+02 0.012 22.4 8.4 82 477-566 6-102 (146)
389 3vp6_A Glutamate decarboxylase 21.8 7E+02 0.024 26.7 12.4 101 455-562 155-284 (511)
390 4dad_A Putative pilus assembly 21.8 76 0.0026 27.0 3.9 81 478-566 18-105 (146)
391 3ffr_A Phosphoserine aminotran 21.7 1.8E+02 0.0061 28.5 7.2 96 456-562 63-167 (362)
392 4hv4_A UDP-N-acetylmuramate--L 21.7 2.3E+02 0.0078 30.7 8.6 89 454-561 21-110 (494)
393 3edm_A Short chain dehydrogena 21.7 3.8E+02 0.013 25.7 9.5 100 454-555 7-132 (259)
394 4hc4_A Protein arginine N-meth 21.5 1.3E+02 0.0044 32.0 6.3 69 454-528 83-155 (376)
395 3gnl_A Uncharacterized protein 21.5 1.4E+02 0.0046 30.0 6.2 77 448-528 15-96 (244)
396 3ot5_A UDP-N-acetylglucosamine 21.3 6.8E+02 0.023 25.9 11.9 70 477-562 254-326 (403)
397 3hv2_A Response regulator/HD d 21.3 1.9E+02 0.0064 24.8 6.4 80 479-566 13-96 (153)
398 2x4g_A Nucleoside-diphosphate- 21.2 2.6E+02 0.0089 27.4 8.3 103 456-565 14-126 (342)
399 1v72_A Aldolase; PLP-dependent 21.2 1.5E+02 0.0052 29.0 6.5 100 456-561 61-178 (356)
400 3r5x_A D-alanine--D-alanine li 21.2 78 0.0027 31.3 4.3 12 521-532 54-65 (307)
401 3afn_B Carbonyl reductase; alp 21.2 3.9E+02 0.013 24.9 9.3 76 454-531 6-94 (258)
402 1ax4_A Tryptophanase; tryptoph 21.1 3.4E+02 0.012 28.0 9.5 102 455-562 92-223 (467)
403 2aeu_A Hypothetical protein MJ 21.1 3.6E+02 0.012 27.3 9.6 93 455-563 77-179 (374)
404 2a9v_A GMP synthase; structura 21.1 86 0.003 30.1 4.5 81 479-564 12-93 (212)
405 3rqi_A Response regulator prot 21.0 2.9E+02 0.0099 24.7 7.9 79 480-566 7-89 (184)
406 3d6k_A Putative aminotransfera 20.9 4.5E+02 0.016 26.8 10.4 99 452-561 91-218 (422)
407 3heb_A Response regulator rece 20.8 1.7E+02 0.0057 25.0 6.0 58 457-514 32-98 (152)
408 3euc_A Histidinol-phosphate am 20.8 3E+02 0.01 27.2 8.7 100 455-561 86-197 (367)
409 3b1d_A Betac-S lyase; HET: PLP 26.3 21 0.00071 36.5 0.0 22 455-476 90-111 (392)
410 2vqe_K 30S ribosomal protein S 20.8 2.2E+02 0.0074 26.0 6.8 46 466-514 64-111 (129)
411 3tqh_A Quinone oxidoreductase; 20.8 1.3E+02 0.0044 30.2 5.9 53 451-511 149-202 (321)
412 3gt7_A Sensor protein; structu 20.8 2.8E+02 0.0096 23.8 7.6 80 479-566 6-91 (154)
413 1qdl_B Protein (anthranilate s 20.8 3.5E+02 0.012 25.2 8.6 75 483-564 4-85 (195)
414 2r85_A PURP protein PF1517; AT 20.8 1.5E+02 0.0051 29.3 6.4 30 457-489 4-33 (334)
415 3nyt_A Aminotransferase WBPE; 20.8 1.9E+02 0.0066 28.9 7.3 92 455-561 51-155 (367)
416 3r8n_K 30S ribosomal protein S 20.7 83 0.0028 28.3 4.0 46 466-514 54-101 (117)
417 4eye_A Probable oxidoreductase 20.6 3.3E+02 0.011 27.5 9.1 54 451-511 156-210 (342)
418 3dxv_A Alpha-amino-epsilon-cap 20.6 1.7E+02 0.0057 30.3 6.9 33 455-487 105-137 (439)
419 2xci_A KDO-transferase, 3-deox 20.6 3.1E+02 0.01 28.1 8.9 75 477-561 222-307 (374)
420 3o1l_A Formyltetrahydrofolate 20.5 2.2E+02 0.0074 29.4 7.6 73 457-535 109-195 (302)
421 1piw_A Hypothetical zinc-type 20.5 2.1E+02 0.0072 29.1 7.6 54 451-511 176-229 (360)
422 2qbu_A Precorrin-2 methyltrans 20.4 2.6E+02 0.0088 26.6 7.8 50 471-521 87-139 (232)
423 3fro_A GLGA glycogen synthase; 20.4 5.1E+02 0.017 25.8 10.4 99 453-562 249-360 (439)
424 3d3u_A 4-hydroxybutyrate COA-t 20.4 85 0.0029 33.9 4.7 96 445-541 14-135 (439)
425 2q2v_A Beta-D-hydroxybutyrate 20.3 4.9E+02 0.017 24.7 9.8 72 454-530 3-87 (255)
426 3ab8_A Putative uncharacterize 20.3 2.8E+02 0.0096 26.3 8.1 64 501-567 83-152 (268)
427 1ja9_A 4HNR, 1,3,6,8-tetrahydr 20.3 2.3E+02 0.008 26.9 7.5 99 454-555 20-144 (274)
428 2o8n_A APOA-I binding protein; 20.2 6.7E+02 0.023 25.2 13.1 119 437-561 55-187 (265)
429 3gk3_A Acetoacetyl-COA reducta 20.1 3.5E+02 0.012 26.0 8.8 78 453-531 23-112 (269)
430 3oid_A Enoyl-[acyl-carrier-pro 20.1 3E+02 0.01 26.5 8.3 75 454-530 3-90 (258)
431 1u2p_A Ptpase, low molecular w 20.1 1.6E+02 0.0056 27.1 6.1 70 457-528 6-88 (163)
432 3r0j_A Possible two component 20.1 3.3E+02 0.011 25.7 8.4 78 479-564 22-103 (250)
433 5nul_A Flavodoxin; electron tr 20.0 1.6E+02 0.0056 25.4 5.8 64 498-563 20-86 (138)
434 3f6p_A Transcriptional regulat 20.0 3.1E+02 0.011 22.3 7.4 76 482-565 4-82 (120)
No 1
>2a0u_A Initiation factor 2B; SGPP, structural genomics, PSI, protein structure initiative eukaryotic initiation factor; 2.10A {Leishmania major} SCOP: c.124.1.5
Probab=100.00 E-value=1.6e-71 Score=597.16 Aligned_cols=316 Identities=20% Similarity=0.290 Sum_probs=286.5
Q ss_pred cCccccc--ccCCCceecccCcchhhhhhcccch----hHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHhcCCCCC
Q 006152 297 RNRVELF--RHLPQYEHGTQLPVLQSKFFQLDTL----HPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYSTPPA 370 (658)
Q Consensus 297 ~~~v~lf--~hLP~~~~~~~~~~~e~~~~ai~~m----hPAI~~LG~q~~~~~I~Gs~araiaml~A~k~vI~dy~~p~~ 370 (658)
.+.|.|| +.||+++.|+.|.++++++.+|+.| +|+| | .++|++|+++++++.....|.
T Consensus 25 ~~~l~ildq~~lP~~~~~~~~~~~~~~~~aIk~m~VrGApaI---g-----------iaaa~~l~l~~~~~~~~~~~~-- 88 (383)
T 2a0u_A 25 PGSLRLLDQRKLPLETVFDDVLTVEDIWSAIKEMRVRGAPAI---A-----------VSAALGIAVATQRKAANGELK-- 88 (383)
T ss_dssp TTEEEEECTTTTTTCCCEEEECSHHHHHHHHHTTSSCSHHHH---H-----------HHHHHHHHHHHHHHHHHSSCC--
T ss_pred CCEEEEEecCCCCCceEEEEcCCHHHHHHHHHhCCCCCcHHH---H-----------HHHHHHHHHHHHhhcccccCC--
Confidence 3479999 9999999999999999999999999 6999 4 488999999999987653331
Q ss_pred cchHHHHHHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006152 371 KTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVT 450 (658)
Q Consensus 371 ~~~~r~L~~~L~~~i~~L~~aRPtsVsmgNAIr~lk~~I~~~~~~~~~~eaKe~L~e~Id~fi~E~i~~a~~~Ia~~a~~ 450 (658)
...+|.+.|+..+++|.++|||++||+|++++|++.+.....+.+.+++|+.+++.+++|++|.+ .+++.|+++|++
T Consensus 89 --~~~~l~~~l~~~~~~L~~aRPtavnL~na~~r~~~~i~~~~~~~~~~~~k~~l~~~a~~i~~e~~-~~~~~I~~~g~~ 165 (383)
T 2a0u_A 89 --SGREVQTFLLTSCDFVMTSRPTAVNLFNCLRDLKAQVDKLDPTKAAAEVAQAFVELAEAVYTNDV-AFNEGIMRHGAA 165 (383)
T ss_dssp --CHHHHHHHHHHHHHHHTTSCCSCSHHHHHHHHHHHHHHHSCTTSCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 35789999999999999999999999999999999987643334678999999999999999965 699999999999
Q ss_pred hcc--------CCCEEEeeCCh--------HHHHHHHHHHHHcCCeeEEEEeCCCCCchHHH-HHHHHHhCCCcEEEEcc
Q 006152 451 KIR--------DGDVLLTYGSS--------SAVEMILQHAHELGKQFRVVIVDSRPKHEGKL-LLRRLVRKGLSCTYTHI 513 (658)
Q Consensus 451 ~I~--------dgdvILT~g~S--------saV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~-La~eL~~~GI~vT~I~D 513 (658)
+|. +|++||||||| .++.++|+.|+++|++|+|||+||||++||.+ ++|+|.+.||+||||+|
T Consensus 166 ~I~~~~~~~~~~g~~ILThcnsg~Lat~g~gTal~~l~~A~~~gk~~~V~v~EtRP~~qGarltA~eL~~~GIpvtlI~D 245 (383)
T 2a0u_A 166 HILAAAKAEGRDKVSILTICNTGALATSRYGTALGVVRQLFYDGKLERVYACETRPWNQGARLTVYECVQEDIPCTLICD 245 (383)
T ss_dssp HHHHHHHHTTCSSEEEEECSCCSTTTSSSSCSHHHHHHHHHHTTCEEEEEEECCTTTTHHHHTHHHHHHHTTCCEEEECG
T ss_pred HhhhhccccCCCCCEEEEecCCcchhcCCCchHHHHHHHHHHcCCeEEEEEeCCCCccchHHHHHHHHHHcCCCEEEEeh
Confidence 999 99999999987 46669999999999999999999999999986 56999999999999999
Q ss_pred hHHHHHhhh--ccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEeecccccccccccCCcccccccCCccccccc
Q 006152 514 NAISYIIHE--VTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGDPDSISKV 591 (658)
Q Consensus 514 sAv~~~M~~--Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~aetyKf~~~~~~ds~~~nElrdp~Ev~~~ 591 (658)
||++|+|++ ||+||||||+|++||+++||+|||++|++||+||||||||||+|||++.++.|..+++|+|+|+|++.+
T Consensus 246 sa~~~~M~~~~Vd~ViVGAD~V~aNG~v~NKiGTy~lAl~Ak~~~vPfyV~ap~~k~d~~~~~g~~i~iEer~~~Ev~~~ 325 (383)
T 2a0u_A 246 GAASSLMLNRKIDAVVVGADRICQNGDTANKIGTYNLAVSAKFHGVKLYVAAPTTTLDVKTASGNHVEIEEREPTEITTN 325 (383)
T ss_dssp GGHHHHHHHSCCCEEEECCSEECTTCCEEEETTHHHHHHHHHHTTCCEEEECCGGGBCTTCCSGGGSCCCBCCTHHHHBC
T ss_pred hHHHHHhhcCCCCEEEECccEEecCCCEeecccHHHHHHHHHHcCCCEEEeCCcceecCcCCCccccccccCCHHHhccc
Confidence 999999998 999999999999999999999999999999999999999999999999999998899999999999987
Q ss_pred C--CccccccCCCccCCCC--ceeccceeeecCCCCcc-EEEeCCCCcCCCcc
Q 006152 592 P--GREDINHLDGWDKSEN--LQLLNLIYDATPSDYVS-LIITDYGMVSHTLV 639 (658)
Q Consensus 592 ~--g~~~~~~l~~~~~~~~--l~v~Np~FDvTPpeLIT-~IITE~Gii~PssV 639 (658)
+ |.. ..+++ ++++||+|||||++||| +||||.|+++|+.+
T Consensus 326 ~~~g~~--------~a~~~~~v~v~NPaFDvTP~~lIt~~iITE~Gv~~p~~~ 370 (383)
T 2a0u_A 326 LVTKQR--------VVADGPHLSIWNPVFDITPSELITGGIITEKGVQAPAAS 370 (383)
T ss_dssp TTTCCB--------CSCCCTTEEECCBSEEEECGGGCCSEEECSSCEECCCSS
T ss_pred ccCCce--------ecCCCCceeeecccccccChHHCCcEEEccCCccCCccc
Confidence 3 432 24566 99999999999999999 99999999988765
No 2
>2yvk_A Methylthioribose-1-phosphate isomerase; methionine salvage pathway,; HET: MRU; 2.40A {Bacillus subtilis} PDB: 2yrf_A*
Probab=100.00 E-value=1.5e-71 Score=595.73 Aligned_cols=316 Identities=22% Similarity=0.351 Sum_probs=285.5
Q ss_pred cCccccc--ccCCCceecccCcchhhhhhcccch----hHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHhcCCCCC
Q 006152 297 RNRVELF--RHLPQYEHGTQLPVLQSKFFQLDTL----HPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYSTPPA 370 (658)
Q Consensus 297 ~~~v~lf--~hLP~~~~~~~~~~~e~~~~ai~~m----hPAI~~LG~q~~~~~I~Gs~araiaml~A~k~vI~dy~~p~~ 370 (658)
.+.|.|| +.||++++|+.|.+++++|.+|++| +|+| | .++|+++++++++.. +
T Consensus 36 ~~~l~ilDq~~lP~~~~~~~~~~~~~~~~aIk~m~VrGApaI---g-----------iaaa~~l~l~~~~~~----~--- 94 (374)
T 2yvk_A 36 ETAITILNQQKLPDETEYLELTTKEDVFDAIVTLKVRGAPAI---G-----------ITAAFGLALAAKDIE----T--- 94 (374)
T ss_dssp SSCEEEECGGGTTTCCCEEEECSHHHHHHHHHTTSSCSHHHH---H-----------HHHHHHHHHHHTTCC----C---
T ss_pred CCEEEEEecCCCCCeEEEEEeCCHHHHHHHHHhCccCCcHHH---H-----------HHHHHHHHHHHHhcc----C---
Confidence 3479999 9999999999999999999999999 6998 4 488899998887531 1
Q ss_pred cchHHHHHHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006152 371 KTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVT 450 (658)
Q Consensus 371 ~~~~r~L~~~L~~~i~~L~~aRPtsVsmgNAIr~lk~~I~~~~~~~~~~eaKe~L~e~Id~fi~E~i~~a~~~Ia~~a~~ 450 (658)
....+|.+.|+.++++|.+||||++||+|+++++++.+.+. .+.+++|+.+++.+++|++|.+ .++++|+++|++
T Consensus 95 -~~~~~l~~~l~~~~~~L~~aRPtavnL~~ai~r~~~~i~~~---~~~~~~k~~l~~~a~~~~~e~~-~~~~~I~~~g~~ 169 (374)
T 2yvk_A 95 -DNVTEFRRRLEDIKQYLNSSRPTAINLSWALERLSHSVENA---ISVNEAKTNLVHEAIQIQVEDE-ETCRLIGQNALQ 169 (374)
T ss_dssp -SCHHHHHHHHHHHHHHHHTTCSSCHHHHHHHHHHHHHTTTC---SSHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHGG
T ss_pred -CCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 23578999999999999999999999999999999888543 4678999999999999999864 699999999999
Q ss_pred hccCCCEEEeeCCh--------HHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHH-HHHHHhCCCcEEEEcchHHHHHhh
Q 006152 451 KIRDGDVLLTYGSS--------SAVEMILQHAHELGKQFRVVIVDSRPKHEGKLL-LRRLVRKGLSCTYTHINAISYIIH 521 (658)
Q Consensus 451 ~I~dgdvILT~g~S--------saV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~L-a~eL~~~GI~vT~I~DsAv~~~M~ 521 (658)
+|++|++||||||| .++.++|+.|+++|++|+|||+||||++||.++ +|+|.+.||+||||+|||++|+|+
T Consensus 170 ~I~~g~~ILThcnsg~Lat~g~gTal~~l~~A~~~gk~~~V~v~EtRP~~qG~rltA~eL~~~GIpvtlI~Dsa~~~~M~ 249 (374)
T 2yvk_A 170 LFKKGDRIMTICNAGSIATSRYGTALAPFYLAKQKDLGLHIYACETRPVLQGSRLTAWELMQGGIDVTLITDSMAAHTMK 249 (374)
T ss_dssp GCCTTCEEEECSCCSTTTSSSSCSTTHHHHHHHHTTCCCEEEEECCTTTTHHHHTHHHHHHTTTCEEEEECGGGHHHHHH
T ss_pred HhCCCCEEEEecCCCccccCCCcHHHHHHHHHHHcCCEEEEEEeCCCCccccHHHHHHHHHHcCCCEEEEehhHHHHHhh
Confidence 99999999999976 356699999999999999999999999999875 699999999999999999999999
Q ss_pred h--ccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEeecccccccccccCCcccccccCCcccccccCCcccccc
Q 006152 522 E--VTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGDPDSISKVPGREDINH 599 (658)
Q Consensus 522 ~--Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~aetyKf~~~~~~ds~~~nElrdp~Ev~~~~g~~~~~~ 599 (658)
+ ||+||||||+|++||+++||+|||++|++||+||||||||||+|||++.++.|..+.+|+|+|+|++.+.|.
T Consensus 250 ~~~Vd~ViVGAD~V~aNG~v~NKiGTy~lAl~Ak~~~vPfyV~ap~~k~d~~~~~g~~i~iEer~~~Ev~~~~g~----- 324 (374)
T 2yvk_A 250 EKQISAVIVGADRIAKNGDTANKIGTYGLAILANAFDIPFFVAAPLSTFDTKVKCGADIPIEERDPEEVRQISGV----- 324 (374)
T ss_dssp HTTCCEEEECCSEEETTCCEEEETTHHHHHHHHHHTTCCEEEECCGGGEETTCSSGGGSCCCBCCTHHHHEETTE-----
T ss_pred hcCCCEEEECccEEecCCCEEecccHHHHHHHHHHcCCCEEEecccceeCccCCCccccccccCCHHHhcccCCc-----
Confidence 8 999999999999999999999999999999999999999999999999999998899999999999877553
Q ss_pred CCCccCCCCceeccceeeecCCCCccEEEeCCCCcCCCcchHHHHhhcc
Q 006152 600 LDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMVSHTLVSVRSACCLY 648 (658)
Q Consensus 600 l~~~~~~~~l~v~Np~FDvTPpeLIT~IITE~Gii~PssVpv~~l~~~y 648 (658)
+..+++++++||+|||||++|||+||||.|+++|+.. +.|.+.|
T Consensus 325 ---~~~~~~v~v~NPaFDvTP~~lIt~iITE~Gv~~P~~~--~~l~~~~ 368 (374)
T 2yvk_A 325 ---RTAPSNVPVFNPAFDITPHDLISGIITEKGIMTGNYE--EEIEQLF 368 (374)
T ss_dssp ---ECSCTTCCBCCBSEEEECGGGCSEEEETTEEECSCHH--HHHHHHT
T ss_pred ---eecCCCcceeCcceeccCHHHCCEEeccCCccCcchH--HHHHHHh
Confidence 3467899999999999999999999999999999873 4566543
No 3
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=100.00 E-value=1.4e-70 Score=582.27 Aligned_cols=313 Identities=23% Similarity=0.377 Sum_probs=272.9
Q ss_pred eecccCcchhhhhhcccchhHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHH
Q 006152 310 EHGTQLPVLQSKFFQLDTLHPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYSTPPAKTLSRDLTAKISSYVSFLI 389 (658)
Q Consensus 310 ~~~~~~~~~e~~~~ai~~mhPAI~~LG~q~~~~~I~Gs~araiaml~A~k~vI~dy~~p~~~~~~r~L~~~L~~~i~~L~ 389 (658)
.+|+.|.++++.+.+|++| +|+|+.+.+++.+.+|..+++.+.+. ...+|.+.|+.++++|.
T Consensus 15 ~~~~~~~~~~~~~~aI~~m--------------~VrGApai~iaaa~~l~~~~~~~~~~----~~~~l~~~l~~~~~~L~ 76 (338)
T 3a11_A 15 RHMAVVKEVLEIAEKIKNM--------------EIRGAGKIARSAAYALQLQAEKSKAT----NVDEFWKEMKQAAKILF 76 (338)
T ss_dssp ----CCSHHHHHHHHHHTC--------------SSCSHHHHHHHHHHHHHHHHHHCCCC----SHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHhC--------------cEeCcHHHHHHHHHHHHHHHHhccCC----CHHHHHHHHHHHHHHHH
Confidence 4567777777777666655 55666666666666666667666542 35789999999999999
Q ss_pred hcCcccccHHHHHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEeeCChHHHH
Q 006152 390 DCRPLSVSMGNAIRFLKSQIAK-IPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVTKIRDGDVLLTYGSSSAVE 468 (658)
Q Consensus 390 ~aRPtsVsmgNAIr~lk~~I~~-~~~~~~~~eaKe~L~e~Id~fi~E~i~~a~~~Ia~~a~~~I~dgdvILT~g~SsaV~ 468 (658)
++|||++||+|++++|++.+.. +....+.+++|+.+++.+++|++|. ..+++.|+++|+++|++|++|||||||.+|+
T Consensus 77 ~aRPtav~L~~a~~~~~~~i~~~~~~~~~~~~~k~~l~~~a~~~~~e~-~~~~~~I~~~g~~~I~~g~~ILTh~~S~tvl 155 (338)
T 3a11_A 77 ETRPTAVSLPNALRYVMHRGKIAYSSGADLEQLRFVIINAAKEFIHNS-EKALERIGEFGAKRIEDGDVIMTHCHSKAAI 155 (338)
T ss_dssp TTCTTCSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHTTCCTTCEEEECSCCHHHH
T ss_pred HhCCChHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCCCEEEEeCCcHHHH
Confidence 9999999999999999998875 2223568899999999999999995 5689999999999999999999999999999
Q ss_pred HHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEcceeEecCCCeecccchHHH
Q 006152 469 MILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACV 548 (658)
Q Consensus 469 ~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~l 548 (658)
++|+.|+++|++|+|||+||||++||+.++++|.+.||+||||+|||++|+|++||+||||||+|++||+++||+|||++
T Consensus 156 ~~l~~A~~~gk~~~V~v~EtRP~~qGrltA~eL~~~GI~vtlI~Dsa~~~~M~~Vd~VivGAd~V~anG~v~NKiGT~~l 235 (338)
T 3a11_A 156 SVMKTAWEQGKDIKVIVTETRPKWQGKITAKELASYGIPVIYVVDSAARHYMKMTDKVVMGADSITVNGAVINKIGTALI 235 (338)
T ss_dssp HHHHHHHHTTCCCEEEEECCTTTTHHHHHHHHHHHTTCCEEEECGGGTTTTGGGCSEEEECCSEECTTSCEEEETTHHHH
T ss_pred HHHHHHHHCCCeEEEEEeCCCCchhhHHHHHHHHhCCCCEEEEehHHHHHHHHhCCEEEECccEEecCCCEeecccHHHH
Confidence 99999999999999999999999999888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCeEeecccccccccccCCcccccccCCcccccccCCccccccCCCccCCCCceeccceeeecCCCCccEEE
Q 006152 549 AMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGDPDSISKVPGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLII 628 (658)
Q Consensus 549 Al~Ak~~~VPVyV~aetyKf~~~~~~ds~~~nElrdp~Ev~~~~g~~~~~~l~~~~~~~~l~v~Np~FDvTPpeLIT~II 628 (658)
|++||+||||||||||+|||++.++.|..++||+|+|+|++.+ |.. ..| +++++++||+|||||++|||+||
T Consensus 236 Al~Ak~~~vPfyV~a~~~k~d~~~~~g~~i~iE~r~~~ev~~~-g~~-----~~w--~~~v~v~NPaFDvTP~~lIt~iI 307 (338)
T 3a11_A 236 ALTAKEHRVWTMIAAETYKFHPETMLGQLVEIEMRDPTEVIPE-DEL-----KTW--PKNIEVWNPAFDVTPPEYVDVII 307 (338)
T ss_dssp HHHHHHTTCEEEEECCGGGBCSCCSSSSCCCCCBCCGGGTSCH-HHH-----TTS--CTTEEECCBSEEEECGGGCSEEE
T ss_pred HHHHHHcCCCEEEecccceecccCCCCcccccccCCHHHcccc-ccc-----ccC--CCCceecCcceeccCHHHcCEEe
Confidence 9999999999999999999999999999999999999999876 321 112 68899999999999999999999
Q ss_pred eCCCCcCCCcchHHHHhhcccce
Q 006152 629 TDYGMVSHTLVSVRSACCLYFHY 651 (658)
Q Consensus 629 TE~Gii~PssVpv~~l~~~yf~~ 651 (658)
||.|+++|++|+.+ -..||++
T Consensus 308 TE~Gv~~p~~v~~~--L~e~y~~ 328 (338)
T 3a11_A 308 TERGIIPPYAAIDI--LREEFGW 328 (338)
T ss_dssp ETTEEECGGGHHHH--HHHHHCC
T ss_pred cCCCccCchhHHHH--HHHHhCc
Confidence 99999999999865 4555554
No 4
>1t9k_A Probable methylthioribose-1-phosphate isomerase; structural genomics, translation initiation factor, AIF-2B subunit, PSI; 2.60A {Thermotoga maritima} SCOP: c.124.1.5
Probab=100.00 E-value=4.3e-71 Score=587.60 Aligned_cols=312 Identities=21% Similarity=0.313 Sum_probs=281.7
Q ss_pred cCccccc--ccCCCceecccCcchhhhhhcccch----hHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHhcCCCCC
Q 006152 297 RNRVELF--RHLPQYEHGTQLPVLQSKFFQLDTL----HPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYSTPPA 370 (658)
Q Consensus 297 ~~~v~lf--~hLP~~~~~~~~~~~e~~~~ai~~m----hPAI~~LG~q~~~~~I~Gs~araiaml~A~k~vI~dy~~p~~ 370 (658)
.+.|.|| +.||++++|..|.++++.+.+|++| +|+| | .++|++|++++++... .
T Consensus 14 ~~~~~~ldq~~lP~~~~~~~~~~~~~~~~aIk~m~VrGAp~i---g-----------~aaa~~l~l~~~~~~~--~---- 73 (347)
T 1t9k_A 14 GNSLKLLDQRKLPFIEEYVECKTHEEVAHAIKEMIVRGAPAI---G-----------VAAAFGYVLGLRDYKT--G---- 73 (347)
T ss_dssp SSCEEEECTTTTTTCCCEEEECSHHHHHHHHHHTSSCSHHHH---H-----------HHHHHHHHHHHHTCCS--S----
T ss_pred CCEEEEEeCCCCCCceEEEEeCCHHHHHHHHHhCCcCCcHHH---H-----------HHHHHHHHHHHHhccc--C----
Confidence 3479999 9999999999999999999999999 6998 4 4889999999876321 0
Q ss_pred cchHHHHHHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006152 371 KTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVT 450 (658)
Q Consensus 371 ~~~~r~L~~~L~~~i~~L~~aRPtsVsmgNAIr~lk~~I~~~~~~~~~~eaKe~L~e~Id~fi~E~i~~a~~~Ia~~a~~ 450 (658)
. ..+.|+.++++|.++|||++||+|+++++++.+.... +.+++|+.+++.+++|++|. ..+++.|+++|++
T Consensus 74 --~---~~~~l~~~~~~L~~aRPtav~l~~a~~~~~~~i~~~~---~~~~~k~~l~~~~~~~~~e~-~~~~~~I~~~g~~ 144 (347)
T 1t9k_A 74 --S---LTDWMKQVKETLARTRPTAVNLFWALNRMEKVFFENA---DRENLFEILENEALKMAYED-IEVNKAIGKNGAQ 144 (347)
T ss_dssp --C---HHHHHHHHHHHHHTSCSSCTHHHHHHHHHHHHHHTTT---TCTTHHHHHHHHHHHHHHHH-HHHHHHHHHHHHT
T ss_pred --C---HHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 1 1145999999999999999999999999999887542 45679999999999999985 4689999999999
Q ss_pred hccCCCEEEeeCChH--------HHHHHHHHHHHcCCeeEEEEeCCCCCchHHHH-HHHHHhCCCcEEEEcchHHHHHhh
Q 006152 451 KIRDGDVLLTYGSSS--------AVEMILQHAHELGKQFRVVIVDSRPKHEGKLL-LRRLVRKGLSCTYTHINAISYIIH 521 (658)
Q Consensus 451 ~I~dgdvILT~g~Ss--------aV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~L-a~eL~~~GI~vT~I~DsAv~~~M~ 521 (658)
+|++|++|||||||. ++.++|+.|+++|++|+|||+||||++||.++ +|+|.+.||+||||+|||++|+|+
T Consensus 145 ~I~~g~~ILThcns~~lat~~~gtvl~~l~~A~~~gk~~~V~v~EtRP~~qG~rlta~eL~~~GI~vtlI~Dsa~~~~M~ 224 (347)
T 1t9k_A 145 LIKDGSTILTHCNAGALATVDYGTALGVIRAAVESGKRIRVFADETRPYLQGARLTAWELMKDGIEVYVITDNMAGWLMK 224 (347)
T ss_dssp TSCTTEEEEECSCCSGGGSSSSCSHHHHHHHHHHTTCCEEEEEECCTTTTHHHHTHHHHHHTTTCEEEEECGGGHHHHHH
T ss_pred HhCCCCEEEEecCCCccccCCccHHHHHHHHHHHCCCeEEEEEeCCCCccccHHHHHHHHHhCCCCEEEEehhHHHHHhh
Confidence 999999999999998 88899999999999999999999999999875 699999999999999999999998
Q ss_pred h--ccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEeecccccccccccCCcccccccCCcccccccCCcccccc
Q 006152 522 E--VTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGDPDSISKVPGREDINH 599 (658)
Q Consensus 522 ~--Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~aetyKf~~~~~~ds~~~nElrdp~Ev~~~~g~~~~~~ 599 (658)
+ ||+||||||+|++||+++||+|||++|++||+||||||||||+|||++.++.+..+++|+|+|+|++.+.|.
T Consensus 225 ~~~Vd~VivGAd~V~aNG~v~NKiGT~~lAl~Ak~~~vPfyV~ap~~k~d~~~~~g~~i~iE~r~~~ev~~~~g~----- 299 (347)
T 1t9k_A 225 RGLIDAVVVGADRIALNGDTANKIGTYSLAVLAKRNNIPFYVAAPVSTIDPTIRSGEEIPIEERRPEEVTHCGGN----- 299 (347)
T ss_dssp TTCCSEEEECCSEEETTSCEEEETTHHHHHHHHHHTTCCEEEECCGGGEETTCSSGGGSCCCBCCTHHHHEETTE-----
T ss_pred cCCCCEEEECccEEecCCCEEecccHHHHHHHHHHcCCCEEEecccceeccccCCccccccccCChHhccccCCe-----
Confidence 7 999999999999999999999999999999999999999999999999999998899999999999877543
Q ss_pred CCCccCCCCceeccceeeecCCCCccEEEeCCCCcCCCcchHHHHhhc
Q 006152 600 LDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMVSHTLVSVRSACCL 647 (658)
Q Consensus 600 l~~~~~~~~l~v~Np~FDvTPpeLIT~IITE~Gii~PssVpv~~l~~~ 647 (658)
+..+++++++||+|||||++|||+||||.|+++|+.. ++|.++
T Consensus 300 ---~~~~~~v~v~NPaFDvTP~~lIt~iITE~Gv~~p~~~--~~l~~~ 342 (347)
T 1t9k_A 300 ---RIAPEGVKVLNPAFDVTENTLITAIITEKGVIRPPFE--ENIKKI 342 (347)
T ss_dssp ---ECSCTTCEECCBSEEEECGGGCSEEEETTEEECSSHH--HHHHHH
T ss_pred ---eccCCCccccCcccccCCHHHCCEEeccCCccCcchH--HHHHHH
Confidence 3467899999999999999999999999999999874 456654
No 5
>1t5o_A EIF2BD, translation initiation factor EIF2B, subunit DELT; subunit delta, structural GEN PSI, protein structure initiative; 1.90A {Archaeoglobus fulgidus} SCOP: c.124.1.5
Probab=100.00 E-value=3e-70 Score=581.86 Aligned_cols=310 Identities=22% Similarity=0.314 Sum_probs=280.2
Q ss_pred cccc--ccCCCceecccCcchhhhhhcccch----hHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHhcCCCCCcch
Q 006152 300 VELF--RHLPQYEHGTQLPVLQSKFFQLDTL----HPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYSTPPAKTL 373 (658)
Q Consensus 300 v~lf--~hLP~~~~~~~~~~~e~~~~ai~~m----hPAI~~LG~q~~~~~I~Gs~araiaml~A~k~vI~dy~~p~~~~~ 373 (658)
|.|| +.||++++|+.|.++++++.+|+.| +|+| | .++|++|++++++. .+ ..
T Consensus 12 l~~ldq~~lP~~~~~~~~~~~~~~~~aIk~m~VrGApai---~-----------iaaa~~l~l~~~~~----~~----~~ 69 (351)
T 1t5o_A 12 LKLIDQTKLPEKLEVIECRNVEELADAIKKLAVRGAPAL---E-----------AAGAYGIALAARER----EF----AD 69 (351)
T ss_dssp EEEECGGGTTTCCCEEEECSHHHHHHHHHTTSSCSHHHH---H-----------HHHHHHHHHHTTSS----CC----SC
T ss_pred EEEEecCCCCCeEEEEEeCCHHHHHHHHHhCCcCCcHHH---H-----------HHHHHHHHHHHHhc----cC----CC
Confidence 8899 9999999999999999999999999 6988 4 37888888887642 11 23
Q ss_pred HHHHHHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 006152 374 SRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVTKIR 453 (658)
Q Consensus 374 ~r~L~~~L~~~i~~L~~aRPtsVsmgNAIr~lk~~I~~~~~~~~~~eaKe~L~e~Id~fi~E~i~~a~~~Ia~~a~~~I~ 453 (658)
..+|.+.|+.++++|.++|||++||+|+++++++.+.. ..+.+++|+.+++.+++|++|.+ .+++.|+++|+++|+
T Consensus 70 ~~~l~~~l~~~~~~L~~aRPtav~l~~a~~~~~~~i~~---~~~~~~~k~~l~~~~~~~~~e~~-~~~~~I~~~g~~~I~ 145 (351)
T 1t5o_A 70 VDELKEHLKKAADFLASTRPTAVNLFVGIERALNAALK---GESVEEVKELALREAEKLAEEDV-ERNRKMGEYGAELLE 145 (351)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHTT---CSSHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhC
Confidence 57899999999999999999999999999999998864 34678999999999999999964 689999999999999
Q ss_pred CCCEEEeeCCh--------HHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHH-HHHHHhCCCcEEEEcchHHHHHhhh--
Q 006152 454 DGDVLLTYGSS--------SAVEMILQHAHELGKQFRVVIVDSRPKHEGKLL-LRRLVRKGLSCTYTHINAISYIIHE-- 522 (658)
Q Consensus 454 dgdvILT~g~S--------saV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~L-a~eL~~~GI~vT~I~DsAv~~~M~~-- 522 (658)
+|++||||||| .++.++|+.|+++|++|+|||+||||++||.+| +|+|.+.||+||||+|||++|+|++
T Consensus 146 ~g~~ILThcnsg~lat~g~gtal~~l~~A~~~gk~~~V~v~EtRP~~qG~rlta~eL~~~GI~vtlI~Dsa~~~~M~~~~ 225 (351)
T 1t5o_A 146 DGDVVLTYCNAGRLATVDWGTALGVVRSAVEQGKEIRVIACETRPLNQGSRLTCWELMEDGIDVTLITDSMVGIVMQKGM 225 (351)
T ss_dssp TTCEEEECSCCSSSSSSSSCSHHHHHHHHHHTTCCCEEEEECCTTTTHHHHTHHHHHHHTTCCEEEECGGGHHHHHHTTC
T ss_pred CCCEEEEecCCccccccCCChHHHHHHHHHHCCCEEEEEEeCCCcccccHHHHHHHHHhCCCCEEEEehhHHHHHhhcCC
Confidence 99999999975 356699999999999999999999999999875 6999999999999999999999987
Q ss_pred ccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEeecccccccccccCCcccccccCCcccccccCCccccccCCC
Q 006152 523 VTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGDPDSISKVPGREDINHLDG 602 (658)
Q Consensus 523 Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~aetyKf~~~~~~ds~~~nElrdp~Ev~~~~g~~~~~~l~~ 602 (658)
||+||||||+|++|| ++||+|||++|++||+||||||||||+|||++. +.+..+++|+|+|+|++.+.|.
T Consensus 226 Vd~VivGAd~V~aNG-v~NKiGT~~lAl~Ak~~~vPfyV~a~~~k~d~~-~~g~~i~iEer~~~ev~~~~g~-------- 295 (351)
T 1t5o_A 226 VDKVIVGADRIVRDA-VFNKIGTYTVSVVAKHHNIPFYVAAPKATFDWE-RTAKDVVIEERPREELIFCGKR-------- 295 (351)
T ss_dssp CSEEEECCSEEETTE-EEEETTHHHHHHHHHHTTCCEEEECCGGGBCTT-CCGGGCCCCBCCTHHHHEETTE--------
T ss_pred CCEEEECccchhhcC-cccccCHHHHHHHHHHcCCCEEEeCccceeccc-cCCCccccccCCHHHhcccCCe--------
Confidence 999999999999999 999999999999999999999999999999999 8888889999999999877553
Q ss_pred ccCCCCceeccceeeecCCCCccEEEeCCCCcCCCcchHHHHhhc
Q 006152 603 WDKSENLQLLNLIYDATPSDYVSLIITDYGMVSHTLVSVRSACCL 647 (658)
Q Consensus 603 ~~~~~~l~v~Np~FDvTPpeLIT~IITE~Gii~PssVpv~~l~~~ 647 (658)
+..+++++++||+|||||++|||+||||.|+++|++. +.|.+.
T Consensus 296 ~~~~~~v~v~NPaFDvTP~~lIt~iITE~Gv~~p~~~--~~l~~~ 338 (351)
T 1t5o_A 296 QIAPLNVKVYNPAFDPTPLENVTALITEYGVIYPPYE--VNVPKV 338 (351)
T ss_dssp ECSCTTCEECCBSEEEEEGGGCSEEEETTEEECSCHH--HHHHHH
T ss_pred eecCCCcceeCccccCCCHHHCCEEEeCCCccCcchH--HHHHHH
Confidence 2467899999999999999999999999999999874 455654
No 6
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=100.00 E-value=4.3e-64 Score=527.46 Aligned_cols=284 Identities=24% Similarity=0.327 Sum_probs=242.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHhcC-CCCCHHHHHHHHHH
Q 006152 349 ARCIAMLQAFQEAIRDYSTPPAKTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIP-ISLSESEAKATLHS 427 (658)
Q Consensus 349 araiaml~A~k~vI~dy~~p~~~~~~r~L~~~L~~~i~~L~~aRPtsVsmgNAIr~lk~~I~~~~-~~~~~~eaKe~L~e 427 (658)
+.+++.+.+|.++++...+ +...+|.+.|+.++++|.++|| ++||+|+++++++.+.... ...+.+++|+.|++
T Consensus 21 s~aiAAi~aL~~~l~~s~~----~T~~el~~~l~~a~~~L~~~r~-avsl~~a~~~~~~~i~~~~~~~~~~~~~k~~l~~ 95 (315)
T 3ecs_A 21 ASAVAAIRTLLEFLKRDKG----ETIQGLRANLTSAIETLCGVDS-SVAVSSGGELFLRFISLASLEYSDYSKCKKIMIE 95 (315)
T ss_dssp CHHHHHHHHHHHHHTCCC--------CHHHHHHHHHHHTTTTTSC-CHHHHHHHHHHHHHCC-----------CTTHHHH
T ss_pred HHHHHHHHHHHHHHHhCCC----CCHHHHHHHHHHHHHHHHhCCC-CccHHHHHHHHHHHHHHhhcccCCHHHHHHHHHH
Confidence 4567788999999876543 3456899999999999999997 9999999999988764321 22356889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCc
Q 006152 428 DIERFINEKIILADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLS 507 (658)
Q Consensus 428 ~Id~fi~E~i~~a~~~Ia~~a~~~I~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~ 507 (658)
.++.|++ ++..+++.|+++|.++|++|++|||||+|++|+++|+.|+++|++|+|||+||||++||.+|+|+|.+.||+
T Consensus 96 ~~~~~~~-~~~~a~~~I~~~~~~~I~~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~la~~L~~~gI~ 174 (315)
T 3ecs_A 96 RGELFLR-RISLSRNKIADLCHTFIKDGATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGKKMAKALCHLNVP 174 (315)
T ss_dssp HHHHHHH-HHTTHHHHHHHHHGGGCCTTEEEEECSCCHHHHHHHHHHHTTTCCEEEEEECCTTTTHHHHHHHHHHTTTCC
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHcCCCCEEEEcCCcHHHHHHHHHHHHcCCeEEEEEecCCCcchHHHHHHHHHHcCCC
Confidence 9999985 488899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcchHHHHHhhhccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEeecccccccccccCCcc-cccccCCcc
Q 006152 508 CTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSI-CSNELGDPD 586 (658)
Q Consensus 508 vT~I~DsAv~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~aetyKf~~~~~~ds~-~~nElrdp~ 586 (658)
||||+|+|++|+|++||+||+|||+|++||+++||+|||++|++||+|+||||||||+|||++.++++.. +++|++++.
T Consensus 175 vtli~Dsa~~~~m~~vd~VivGAd~i~~nG~v~nkiGT~~iAl~Ak~~~vP~~V~a~~~K~~~~~~~~~~~i~~e~~~~~ 254 (315)
T 3ecs_A 175 VTVVLDAAVGYIMEKADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVVAESFKFVRLFPLNQQDVPDKFKYKA 254 (315)
T ss_dssp EEEECGGGHHHHGGGCSEEEEECSEECTTSCEEEETTHHHHHHHHHHTTCCEEEECCGGGBCSCCCSSGGGSCGGGTC--
T ss_pred EEEEehhHHHHHHHhCCEEEECceEEecCCCeeehhhhHHHHHHHHHhCCCEEEEeccccccccCCCCcccCCccccChh
Confidence 9999999999999999999999999999999999999999999999999999999999999999887643 478999988
Q ss_pred cccccCCccccccCCCccCCCCceeccceeeecCCCCccEEEeCCCCcCCCcchHHHHhhcccc
Q 006152 587 SISKVPGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMVSHTLVSVRSACCLYFH 650 (658)
Q Consensus 587 Ev~~~~g~~~~~~l~~~~~~~~l~v~Np~FDvTPpeLIT~IITE~Gii~PssVpv~~l~~~yf~ 650 (658)
|++..+ ..++++.++||+|||||++|||+||||.|+++|++|+.+ |+++||-
T Consensus 255 ev~~~~-----------~~~~~v~v~NP~fDvTP~~lIt~iITe~Gv~~p~~vs~e-Lik~~~~ 306 (315)
T 3ecs_A 255 DTLKVA-----------QTGQDLKEEHPWVDYTAPSLITLLFTDLGVLTPSAVSDE-LIKLYLA 306 (315)
T ss_dssp ----------------------CCBCCCSEEEECGGGCSEEEETTEEECGGGHHHH-HHHHHTC
T ss_pred hccccc-----------cCCCcCcCCCCCccCCCHHHcCEEEcCCCCCCcchhhHH-HHHHHHH
Confidence 876432 245689999999999999999999999999999999877 9999985
No 7
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=100.00 E-value=2.1e-63 Score=514.28 Aligned_cols=274 Identities=26% Similarity=0.316 Sum_probs=257.4
Q ss_pred hhHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHhcCcccccHHHHHHHHHH
Q 006152 328 LHPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYSTPPAKTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKS 407 (658)
Q Consensus 328 mhPAI~~LG~q~~~~~I~Gs~araiaml~A~k~vI~dy~~p~~~~~~r~L~~~L~~~i~~L~~aRPtsVsmgNAIr~lk~ 407 (658)
+||.+..+...+.+++++|+.+.|++++.+|..+++++ ++ .+|++.|+.++++|.++||+++||+|++|+|
T Consensus 2 l~~~~~~~~~~i~~~~vrGa~~i~~aa~~~l~~~~~~~-~~------~~~~~~l~~~~~~L~~~RPtav~l~~a~~~~-- 72 (276)
T 1vb5_A 2 LPERVLEILREMKRERIKGASWLAKKGAEAFLTLAEEL-DE------SLLEDAIMELREEVVKVNPSMASLYNLARFI-- 72 (276)
T ss_dssp CCHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHS-CT------TTHHHHHHHHHHHHHHHCTTCHHHHHHHHHS--
T ss_pred CcccHHHHHHHHHhCcEeCcHHHHHHHHHHHHHHHHhc-CH------HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHc--
Confidence 58899999999999999999999999999999999887 32 4688889999999999999999999999998
Q ss_pred HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeC
Q 006152 408 QIAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVD 487 (658)
Q Consensus 408 ~I~~~~~~~~~~eaKe~L~e~Id~fi~E~i~~a~~~Ia~~a~~~I~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~E 487 (658)
. .+++|+.+++.+++|++| +..++++|+++++++|++|++|||||+|+++..+|+.|+++|++|+|||+|
T Consensus 73 ---~------~~~~k~~l~~~~~~~~~~-~~~~~~~Ia~~a~~~I~~g~~IlT~~~s~Tv~~~l~~a~~~~~~~~V~v~e 142 (276)
T 1vb5_A 73 ---P------VTNRRDILKSRALEFLRR-MEEAKRELASIGAQLIDDGDVIITHSFSSTVLEIIRTAKERKKRFKVILTE 142 (276)
T ss_dssp ---C------CCSCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCTTEEEECCSCCHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred ---C------HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHccCCCEEEEeCCChHHHHHHHHHHHcCCeEEEEEeC
Confidence 1 345688899999999987 678999999999999999999999999999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEeeccccc
Q 006152 488 SRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYK 567 (658)
Q Consensus 488 SRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~aetyK 567 (658)
|||++||+.++++|.+.||+||+|+|++++++|++||+||+|||+|++||+++||+|||++|++||+|++|||||||+||
T Consensus 143 trP~~qG~~~a~~L~~~gI~vtli~dsa~~~~m~~vd~vivGAd~i~~nG~v~nkiGt~~iA~~A~~~~vp~~V~a~~~K 222 (276)
T 1vb5_A 143 SSPDYEGLHLARELEFSGIEFEVITDAQMGLFCREASIAIVGADMITKDGYVVNKAGTYLLALACHENAIPFYVAAETYK 222 (276)
T ss_dssp CTTTTHHHHHHHHHHHTTCCEEEECGGGHHHHHTTCSEEEECCSEECTTSCEEEETTHHHHHHHHHHTTCCEEEECCGGG
T ss_pred CCcchhhHHHHHHHHHCCCCEEEEcHHHHHHHHccCCEEEEcccEEecCCCEeechhHHHHHHHHHHcCCCEEEeccccc
Confidence 99999998889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCcccccccCCcccccccCCccccccCCCccCCCCceeccceeeecCCCCccEEEeCCCCcCCCcch
Q 006152 568 FHERVQLDSICSNELGDPDSISKVPGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMVSHTLVS 640 (658)
Q Consensus 568 f~~~~~~ds~~~nElrdp~Ev~~~~g~~~~~~l~~~~~~~~l~v~Np~FDvTPpeLIT~IITE~Gii~PssVp 640 (658)
|++. ..+..++||+|+++| ++++++||.||+||++|||+||||.|+++|++|+
T Consensus 223 ~~~~-~~~~~i~iE~r~~~e-------------------~~v~v~np~fD~tP~~lI~~iITe~Gv~~p~~v~ 275 (276)
T 1vb5_A 223 FHPT-LKSGDVMLMERDLIR-------------------GNVRIRNVLFDVTPWKYVRGIITELGIVIPPRDI 275 (276)
T ss_dssp BCSS-CCGGGCCCCBCCCEE-------------------TTEECCCBCEEEECGGGCSEEEETTEEECTTTTC
T ss_pred cCcc-cCccccccccCCccc-------------------cCccccCCCeEecCHHHCCEEEeCCCccCccccC
Confidence 9999 778888999999875 3578999999999999999999999999999885
No 8
>1w2w_B 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5
Probab=100.00 E-value=6.4e-49 Score=386.75 Aligned_cols=171 Identities=21% Similarity=0.298 Sum_probs=152.8
Q ss_pred CCeeEEEEeCCCCCchHHHH-HHHHHhCCCcEEEEcchHHHHHhhh----ccEEEEcceeEecCCCeecccchHHHHHHH
Q 006152 478 GKQFRVVIVDSRPKHEGKLL-LRRLVRKGLSCTYTHINAISYIIHE----VTRVFLGASSVLSNGTVCSRVGTACVAMVA 552 (658)
Q Consensus 478 gk~f~ViV~ESRP~~EG~~L-a~eL~~~GI~vT~I~DsAv~~~M~~----Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~A 552 (658)
||+|+|||+||||++||.+| +|+|.++||+||||+|+|++|+|++ ||+||||||+|++||+++||+|||++|++|
T Consensus 2 ~k~~~V~v~EsRP~~qG~rlta~eL~~~gI~vtlI~Dsa~~~~m~~~~~~Vd~VivGAd~v~~nG~v~nkiGT~~~Al~A 81 (191)
T 1w2w_B 2 PRMGHVFPLETRPYNQGSRLTAYELVYDKIPSTLITDSSIAYRIRTSPIPIKAAFVGADRIVRNGDTANKIGTLQLAVIC 81 (191)
T ss_dssp CEEEEEEEBCCTTTTHHHHTHHHHHHHHTCCBEEBCGGGHHHHHHHCSSCEEEEEECCSEECTTSCEEEETTHHHHHHHH
T ss_pred CcEEEEEEcCCCCccccHHHHHHHHHHcCCCEEEEechHHHHHHHhCCCCCCEEEECccEEecCCCEEecccHHHHHHHH
Confidence 78999999999999999875 7999999999999999999999998 999999999999999999999999999999
Q ss_pred hhCCCCeEeecccccccccccCCcccccccCCcccccccCCc----ccc----------ccCCCccCCCCceeccceeee
Q 006152 553 YGFHIPVLVCCEAYKFHERVQLDSICSNELGDPDSISKVPGR----EDI----------NHLDGWDKSENLQLLNLIYDA 618 (658)
Q Consensus 553 k~~~VPVyV~aetyKf~~~~~~ds~~~nElrdp~Ev~~~~g~----~~~----------~~l~~~~~~~~l~v~Np~FDv 618 (658)
|+|+||||||||+|||+++++++..+.+|+|+|+|++..+|. .+. .....|..+++++++||+||+
T Consensus 82 k~~~vPf~V~a~~~k~~~~~~~g~~i~iE~r~~~ev~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~v~Np~fDv 161 (191)
T 1w2w_B 82 KQFGIKFFVVAPKTTIDNVTETGDDIIVEERNPEEFKVVTGTVINPENGSLILNESGEPITGKVGIAPLEINVWNPAFDI 161 (191)
T ss_dssp HHHTCEEEEECCGGGBCSSCCSGGGCCCCBCCTHHHHEEEEEEBCTTTCCBCBCTTSCBCEEEEECSCTTCEECCBSEEE
T ss_pred HHcCCCEEEecccceeeeccCCcceeecccCCHHHhccccCccccccccccccccccccccccccccCCCcccccccccc
Confidence 999999999999999999999998899999999999877542 000 001225678899999999999
Q ss_pred cCCCCccEEEeCCCCcCCCcchHHHHhhcc
Q 006152 619 TPSDYVSLIITDYGMVSHTLVSVRSACCLY 648 (658)
Q Consensus 619 TPpeLIT~IITE~Gii~PssVpv~~l~~~y 648 (658)
||++|||+||||.|+++|+.+....|.++|
T Consensus 162 TP~~lIt~iITE~Gv~~ps~~~~~~l~~~~ 191 (191)
T 1w2w_B 162 TPHELIDGIITEEGVFTKNSSGEFQLESLF 191 (191)
T ss_dssp ECGGGCSEEEETTEEECCCTTSCCCCGGGC
T ss_pred CCHHHcCEEEecCcccCCCCcchhhHHhhC
Confidence 999999999999999999888752366654
No 9
>1w2w_A 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5
Probab=99.89 E-value=4.7e-23 Score=205.38 Aligned_cols=165 Identities=13% Similarity=0.176 Sum_probs=139.2
Q ss_pred cCccccc--ccCCCceecccCcchhhhhhcccch----hHHHHHHHHhhhcccccchHHHHHHHHHHHHHHH-H-hcC--
Q 006152 297 RNRVELF--RHLPQYEHGTQLPVLQSKFFQLDTL----HPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAI-R-DYS-- 366 (658)
Q Consensus 297 ~~~v~lf--~hLP~~~~~~~~~~~e~~~~ai~~m----hPAI~~LG~q~~~~~I~Gs~araiaml~A~k~vI-~-dy~-- 366 (658)
.+.|.|| +.||++++|+.|.+++++|.+|++| +|+| | .++|++|++++++.- . +..
T Consensus 15 ~~~l~iLDQ~~LP~e~~~~~~~~~~~v~~AIk~M~VRGAPaI---g-----------iaAA~glal~a~~~~~~~~~~~~ 80 (211)
T 1w2w_A 15 NVSVKVLDQLLLPYTTKYVPIHTIDDGYSVIKSMQVRGAPAI---A-----------IVGSLSVLTEVQLIKHNPTSDVA 80 (211)
T ss_dssp SCEEEEECTTTTTTCCCEEECCSHHHHHHHHHTTSSCSHHHH---H-----------HHHHHHHHHHHHHHHHCTTSTGG
T ss_pred CCEEEEEecCCCCCcEEEEEeCCHHHHHHHHHCCcccCchHH---H-----------HHHHHHHHHHHHhccccCChhhc
Confidence 3479999 9999999999999999999999999 6999 4 489999999998753 1 110
Q ss_pred --CCCCcchHHHHHHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006152 367 --TPPAKTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINEKIILADRVI 444 (658)
Q Consensus 367 --~p~~~~~~r~L~~~L~~~i~~L~~aRPtsVsmgNAIr~lk~~I~~~~~~~~~~eaKe~L~e~Id~fi~E~i~~a~~~I 444 (658)
.|- ....+|..+|+..+++|.++|||+|||+||+++|+..+... .+.+++++.+.+.++.|++|.+ .+|++|
T Consensus 81 ~~~~~--~~~~~~~~~l~~~~~~L~~sRPTAVNL~~Al~r~~~~~~~~---~~~~~~~~~l~~~a~~i~~ed~-~~n~~I 154 (211)
T 1w2w_A 81 TLYSL--VNWESTKTVLNKRLDFLLSSRPTAVNLSNSLVEIKNILKSS---SDLKAFDGSLYNYVCELIDEDL-ANNMKM 154 (211)
T ss_dssp GGSCT--TCHHHHHHHHHHHHHHHHTSCCSCSHHHHHHHHHHHHHHTC---SSHHHHHHHHHHHHHHHHHHHH-HHHHHH
T ss_pred ccccc--cchHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 010 11237888999999999999999999999999999888643 3577899999999999999964 689999
Q ss_pred HHHHHHhc------c---CCCEEEeeCCh---------HHHHHHHHHHHHcCCeeE
Q 006152 445 VKHAVTKI------R---DGDVLLTYGSS---------SAVEMILQHAHELGKQFR 482 (658)
Q Consensus 445 a~~a~~~I------~---dgdvILT~g~S---------saV~~vL~~A~e~gk~f~ 482 (658)
++||+++| . +|++||||||+ +++ ++|+.||++|+.|+
T Consensus 155 G~~Ga~lI~~~~~~~~~~dg~~ILTHCNtG~LAT~g~GTAL-gvIr~a~~~Gk~~~ 209 (211)
T 1w2w_A 155 GDNGAKYLIDVLQKDGFKDEFAVLTICNTGSLATSGYGTAL-GVIRSLWKDSLAKT 209 (211)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEEEECSCCSGGGSSSSCSHH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccccCCCCCeEEeECCCchHhhcCcchHH-HHHHHHHHcCCccc
Confidence 99999999 8 89999999998 555 99999999998653
No 10
>1uj6_A Ribose 5-phosphate isomerase; enzyme-inhibitor complex, riken structural genomics/proteomi initiative, RSGI, structural genomics; HET: A5P; 1.74A {Thermus thermophilus} SCOP: c.124.1.4 d.58.40.1 PDB: 1uj5_A* 1uj4_A*
Probab=98.08 E-value=1.1e-05 Score=81.29 Aligned_cols=126 Identities=14% Similarity=0.063 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHhccCCCEEEeeCChHHHHHHHHHHHHc----CCe-eEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch
Q 006152 440 ADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHEL----GKQ-FRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN 514 (658)
Q Consensus 440 a~~~Ia~~a~~~I~dgdvILT~g~SsaV~~vL~~A~e~----gk~-f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds 514 (658)
..++|++.|+++|++|++|..-+.||+. .+++...+. +.+ ++| |+.| ...+.+|.+.||++..+.+
T Consensus 8 ~K~~IA~~Aa~~I~dg~~I~LgsGST~~-~~~~~L~~~~~~~~l~~itv-VTnS------~~~a~~l~~~gi~v~~l~~- 78 (227)
T 1uj6_A 8 YKKEAAHAAIAYVQDGMVVGLGTGSTAR-YAVLELARRLREGELKGVVG-VPTS------RATEELAKREGIPLVDLPP- 78 (227)
T ss_dssp HHHHHHHHHHTTCCTTCEEEECCSHHHH-HHHHHHHHHHHTTSSCSCEE-EESS------HHHHHHHHHTTCCBCCCCT-
T ss_pred HHHHHHHHHHHHCCCCCEEEEcCCHHHH-HHHHHHhhhhhhcCCCCEEE-ECCc------HHHHHHHHhCCCeEEEcCC-
Confidence 4567999999999999999977666665 566666443 224 776 4443 5567788888998877722
Q ss_pred HHHHHhhhccEEEEcceeEecCCCeecccchHHH--HHHHhhCCCCeEeecccccccccccCCccccccc
Q 006152 515 AISYIIHEVTRVFLGASSVLSNGTVCSRVGTACV--AMVAYGFHIPVLVCCEAYKFHERVQLDSICSNEL 582 (658)
Q Consensus 515 Av~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~l--Al~Ak~~~VPVyV~aetyKf~~~~~~ds~~~nEl 582 (658)
.++|+.|+|||.|-.++......|.+.+ +++++. ...|||+|+..||....- ....++|.
T Consensus 79 ------~~~D~af~Gadgvd~~~~~~~~~g~a~~kekiva~~-a~~~ivlaD~sK~~~~lg-~~~lPvEV 140 (227)
T 1uj6_A 79 ------EGVDLAIDGADEIAPGLALIKGMGGALLREKIVERV-AKEFIVIADHTKKVPVLG-RGPVPVEI 140 (227)
T ss_dssp ------TCEEEEEECCSEEEGGGEEECCTTSCHHHHHHHHHT-EEEEEEEEEGGGBCSSSC-SSCEEEEE
T ss_pred ------CcCCEEEECCCccCccccEECCHHHHHHHHHHHHhc-cCCEEEEEEcchhccccC-CCceeEEE
Confidence 3799999999999999855556666666 466653 349999999999997632 22344454
No 11
>2f8m_A Ribose 5-phosphate isomerase; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium; 2.09A {Plasmodium falciparum}
Probab=97.86 E-value=3.5e-05 Score=78.52 Aligned_cols=130 Identities=15% Similarity=0.132 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHH-hccCCCEEEeeCChHHHHHHHHHHHHc---C-C-eeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEc
Q 006152 439 LADRVIVKHAVT-KIRDGDVLLTYGSSSAVEMILQHAHEL---G-K-QFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTH 512 (658)
Q Consensus 439 ~a~~~Ia~~a~~-~I~dgdvILT~g~SsaV~~vL~~A~e~---g-k-~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~ 512 (658)
...++|++.|++ +|++|++|. .|.+|++..+++...+. + . .++| |+-| ...+.+|.+.||++..+-
T Consensus 11 ~~K~~iA~~Aa~~~I~dg~~Ig-LgsGST~~~~~~~L~~~~~~~~l~~itv-VTnS------~~~a~~l~~~gi~v~~l~ 82 (244)
T 2f8m_A 11 SLKKIVAYKAVDEYVQSNMTIG-LGTGSTVFYVLERIDNLLKSGKLKDVVC-IPTS------IDTELKARKLGIPLTTLE 82 (244)
T ss_dssp HHHHHHHHHHHHHHCCTTCEEE-ECCSTTTHHHHHHHHHHHHHTSSCSCEE-EESS------HHHHHHHHHHTCCBCCCC
T ss_pred HHHHHHHHHHHHHhCCCCCEEE-EcChHHHHHHHHHHhhhhhccCCCCEEE-ECCc------HHHHHHHHHCCCeEEEec
Confidence 366789999999 999999988 66666666777766543 2 1 5665 4433 345667777799877662
Q ss_pred chHHHHHhhhccEEEEcceeEecCCCeecccchHHHHH-HHhhCCCCeEeeccccccc-ccccCCccccccc
Q 006152 513 INAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAM-VAYGFHIPVLVCCEAYKFH-ERVQLDSICSNEL 582 (658)
Q Consensus 513 DsAv~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl-~Ak~~~VPVyV~aetyKf~-~~~~~ds~~~nEl 582 (658)
.+.++|+.|.|||.|-.+++++---|-+.+-- +.-....-|||+|+..||. +..-.....+.|.
T Consensus 83 ------~~~~iD~afdGaDeId~~~glikg~g~Al~kekiva~~A~~~ivlaD~SK~~~~~Lg~~~plPvEV 148 (244)
T 2f8m_A 83 ------KHSNIDITIDGTDEIDLNLNLIKGRGGALVREKLVASSSSLLIIIGDESKLCTNGLGMTGAVPIEI 148 (244)
T ss_dssp ------SSCCBSEEEECCSEECTTCCEECCTTSCHHHHHHHHHTBSCEEEEEEGGGBCSSCTTCSSCEEEEE
T ss_pred ------ccCcCCEEEECCcccCCCCCcccCHHHHHHHHHHHHHhhCcEEEEEECCccccccCCCCCcEEEEE
Confidence 33489999999999999977776666655544 2445677899999999999 6542222344444
No 12
>1lk5_A D-ribose-5-phosphate isomerase; alpha/beta structure; 1.75A {Pyrococcus horikoshii} SCOP: c.124.1.4 d.58.40.1 PDB: 1lk7_A*
Probab=97.76 E-value=7.9e-05 Score=75.13 Aligned_cols=128 Identities=15% Similarity=0.126 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHhccCCCEEEeeCChHHHHHHHHHHHHc---CC--eeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch
Q 006152 440 ADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHEL---GK--QFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN 514 (658)
Q Consensus 440 a~~~Ia~~a~~~I~dgdvILT~g~SsaV~~vL~~A~e~---gk--~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds 514 (658)
..++|++.|+++|++|++|. .+.||++..+++...+. +. +++| |+-| ...+.+|.+.||++..+ .
T Consensus 6 ~K~~IA~~Aa~~I~dg~~I~-LdsGST~~~~a~~L~~~~~~~~l~~itv-VTnS------~~~a~~l~~~gi~vi~l--~ 75 (229)
T 1lk5_A 6 MKKIAAKEALKFIEDDMVIG-LGTGSTTAYFIKLLGEKLKRGEISDIVG-VPTS------YQAKLLAIEHDIPIASL--D 75 (229)
T ss_dssp HHHHHHHHHGGGCCTTCEEE-ECCSHHHHHHHHHHHHHHHTTSSCSCEE-EESS------HHHHHHHHHTTCCBCCG--G
T ss_pred HHHHHHHHHHHhCCCCCEEE-EcChHHHHHHHHHHhhhhhhccCCCEEE-ECCc------HHHHHHHHhCCCeEEEe--C
Confidence 44679999999999999998 56666665777766543 21 5666 4433 35567777788887653 2
Q ss_pred HHHHHhhhccEEEEcceeEecCCCeecccchHHHH--HHHhhCCCCeEeecccccccccccCCccccccc
Q 006152 515 AISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVA--MVAYGFHIPVLVCCEAYKFHERVQLDSICSNEL 582 (658)
Q Consensus 515 Av~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lA--l~Ak~~~VPVyV~aetyKf~~~~~~ds~~~nEl 582 (658)
. +.++|+.|+|||.|-.++++..-.|-+.+- +++ ....-||++|+..||....-.....+.|.
T Consensus 76 ~----~~~~D~af~Gadgid~~~g~~~~~~~a~~kekiv~-~~A~~~ivlaD~SK~~~~lg~~~~lPvEV 140 (229)
T 1lk5_A 76 Q----VDAIDVAVDGADEVDPNLNLIKGRGAALTMEKIIE-YRAGTFIVLVDERKLVDYLCQKMPVPIEV 140 (229)
T ss_dssp G----CSCEEEEEECCSEECTTCCEECCTTSCHHHHHHHH-HTEEEEEEEEEGGGBCSSTTSSCCEEEEE
T ss_pred C----cccCCEEEECCCeECCCCCeecCHHHHHHHHHHHH-HhcCCeEEEEchhhhhhhcCCCCCEEEEE
Confidence 1 147999999999999887665544444443 233 34458999999999987643222344444
No 13
>1m0s_A Ribose-5-phosphate isomerase A; D-ribose 5-phosphate isomerase, northeast structural genomics consortium, IR21, structural genomics, PSI; HET: CIT; 1.90A {Haemophilus influenzae} SCOP: c.124.1.4 d.58.40.1
Probab=97.72 E-value=5.1e-05 Score=76.05 Aligned_cols=129 Identities=14% Similarity=0.157 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHhccCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHH
Q 006152 440 ADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYI 519 (658)
Q Consensus 440 a~~~Ia~~a~~~I~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~ 519 (658)
..++|++.|+++|++|++|. .+.||++..+++...+.+.+++|.|+-| ...+.+|.+.||++..+ ..
T Consensus 6 ~K~~IA~~Aa~~I~dg~~I~-LdsGST~~~la~~L~~~~~~itv~VTnS------~~~a~~l~~~gi~vi~l--~~---- 72 (219)
T 1m0s_A 6 MKKLAAQAALQYVKADRIVG-VGSGSTVNCFIEALGTIKDKIQGAVAAS------KESEELLRKQGIEVFNA--ND---- 72 (219)
T ss_dssp HHHHHHHHHGGGCCTTSEEE-ECCSHHHHHHHHHHHTTGGGSCEEEESS------HHHHHHHHHTTCCBCCG--GG----
T ss_pred HHHHHHHHHHHhCCCCCEEE-EcChHHHHHHHHHHhccCCCEEEEECCh------HHHHHHHHhCCCeEEEe--Cc----
Confidence 44679999999999999998 5666666577776654311577745554 34567777788887653 21
Q ss_pred hhhccEEEEcceeEecCCCeecccchHHHH--HHHhhCCCCeEeecccccccccccCCccccccc
Q 006152 520 IHEVTRVFLGASSVLSNGTVCSRVGTACVA--MVAYGFHIPVLVCCEAYKFHERVQLDSICSNEL 582 (658)
Q Consensus 520 M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lA--l~Ak~~~VPVyV~aetyKf~~~~~~ds~~~nEl 582 (658)
+.++|+.|+|||.|-.++++..--|-+.+- ++++ ...-+|++|+..||....-.....+.|.
T Consensus 73 ~~~~D~af~Gadgid~~~g~~~~~~~a~~kekiv~~-~A~~~ivlaD~SK~~~~lg~~~~lPvEV 136 (219)
T 1m0s_A 73 VSSLDIYVDGADEINPQKMMIKGGGAALTREKIVAA-LAKKFICIVDSSKQVDVLGSTFPLPVEV 136 (219)
T ss_dssp CSCEEEEEECCSEECTTSCEECCTTSCHHHHHHHHH-HEEEEEEEEEGGGBCSSTTSSSCEEEEE
T ss_pred cccCCEEEECcCeECCCCCeecCHHHHHHHHHHHHH-hcCcEEEEEeCcHHhhccCCCCCEEEEE
Confidence 148999999999999876665544444333 3333 3348999999999987643222344443
No 14
>3kwm_A Ribose-5-phosphate isomerase A; structural genomics, IDP02119, center for structu genomics of infectious diseases, csgid; 2.32A {Francisella tularensis subsp}
Probab=97.44 E-value=0.00029 Score=70.95 Aligned_cols=120 Identities=14% Similarity=0.148 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHhccCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHH
Q 006152 440 ADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYI 519 (658)
Q Consensus 440 a~~~Ia~~a~~~I~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~ 519 (658)
..+.|++.|+++|++|++|.. |.+|++..+++...+..+++++.|+-| ...+..|.+.||++..+-+
T Consensus 12 ~K~~iA~~A~~~V~~g~~Igl-gsGST~~~~i~~L~~~~~~itv~VtnS------~~~a~~l~~~gi~l~~l~~------ 78 (224)
T 3kwm_A 12 LKKLAATEAAKSITTEITLGV-GTGSTVGFLIEELVNYRDKIKTVVSSS------EDSTRKLKALGFDVVDLNY------ 78 (224)
T ss_dssp HHHHHHHHHHTTCCSSEEEEE-CCSHHHHHHHHHGGGCTTTEEEEEESC------HHHHHHHHHTTCCBCCHHH------
T ss_pred HHHHHHHHHHHhCCCCCEEEE-CCcHHHHHHHHHHHhhcCceEEEECCc------HHHHHHHHHcCCeEEecCc------
Confidence 446789999999999987765 555555577777655445677756554 3456778888998765321
Q ss_pred hhhccEEEEcceeEecCCCeecccchHHHH-HHHhhCCCCeEeecccccccccc
Q 006152 520 IHEVTRVFLGASSVLSNGTVCSRVGTACVA-MVAYGFHIPVLVCCEAYKFHERV 572 (658)
Q Consensus 520 M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lA-l~Ak~~~VPVyV~aetyKf~~~~ 572 (658)
..++|+.|.|||.|-.++.++---|...+= =+......-|||+++..||.++.
T Consensus 79 ~~~iD~afdGADevd~~~~liKGgg~al~rEKiva~~A~~~iviaD~sK~~~~L 132 (224)
T 3kwm_A 79 AGEIDLYIDGADECNNHKELIKGGGAALTREKICVAAAKKFICIIDESKKVNTL 132 (224)
T ss_dssp HCSEEEEEECCSEECTTSCEECCSSSCHHHHHHHHHTEEEEEEEEEGGGBCSSB
T ss_pred cccccEEEECCCccccccCeecCchhhHHHHHHHHHhcCcEEEEEeCchhhhhc
Confidence 258999999999999998876644443331 12223456789999999999764
No 15
>3hhe_A Ribose-5-phosphate isomerase A; niaid, ssgcid, decode, SBRI, UW, STRU genomics, seattle structural genomics center for infectious; HET: 5RP; 2.30A {Bartonella henselae}
Probab=97.40 E-value=0.0004 Score=71.11 Aligned_cols=119 Identities=16% Similarity=0.128 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHhccCCCEEEeeCChHHHHHHHHHHHH---cCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHH
Q 006152 440 ADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHE---LGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAI 516 (658)
Q Consensus 440 a~~~Ia~~a~~~I~dgdvILT~g~SsaV~~vL~~A~e---~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv 516 (658)
..+.|++.|+++|++|++|.. |.+|++..+++...+ .|.++++ |+- +...+.+|.+.||++..+.+
T Consensus 27 ~K~~iA~~A~~~V~dg~vIgL-GsGST~~~~i~~L~~~~~~gl~Itv-Vtt------S~~ta~~l~~~GI~l~~l~~--- 95 (255)
T 3hhe_A 27 LKKMAALKALEFVEDDMRLGI-GSGSTVNEFIPLLGERVANGLRVTC-VAT------SQYSEQLCHKFGVPISTLEK--- 95 (255)
T ss_dssp HHHHHHHHHHTTCCTTEEEEE-CCSHHHHHHHHHHHHHHHTTCCEEE-EES------SHHHHHHHHHTTCCBCCTTT---
T ss_pred HHHHHHHHHHHhCCCCCEEEE-CCcHHHHHHHHHHHHhhccCCcEEE-EcC------CHHHHHHHHHcCCcEEeccc---
Confidence 345688899999999987665 666655566766544 2334553 333 23456778889998765432
Q ss_pred HHHhhhccEEEEcceeEecCCCeecccchHHHH-HHHhhCCCCeEeecccccccccc
Q 006152 517 SYIIHEVTRVFLGASSVLSNGTVCSRVGTACVA-MVAYGFHIPVLVCCEAYKFHERV 572 (658)
Q Consensus 517 ~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lA-l~Ak~~~VPVyV~aetyKf~~~~ 572 (658)
+.++|+.|.|||.|-.+..++---|.+.+= =+.-....-|||+++..||.++.
T Consensus 96 ---~~~iD~afdGADeVD~~~~lIKGgG~al~rEKiva~~A~~~ivIaD~SK~v~~L 149 (255)
T 3hhe_A 96 ---IPELDLDIDGADEIGPEMTLIKGGGGALLHEKIVASASRAMFVIADETKMVKTL 149 (255)
T ss_dssp ---CCSBSEEEECCSEECGGGCEECCTTSCHHHHHHHHHTBSCEEEEEEGGGBCSSS
T ss_pred ---ccccCEEEECCCccccccCeeeCchhhhHHHHHHHHhcCcEEEEEeCCCChhhh
Confidence 247999999999999987776544432221 12233456799999999999864
No 16
>1xtz_A Ribose-5-phosphate isomerase; yeast; 2.10A {Saccharomyces cerevisiae}
Probab=97.40 E-value=0.00022 Score=73.33 Aligned_cols=119 Identities=18% Similarity=0.168 Sum_probs=82.7
Q ss_pred HHHHHHHHHHH-hcc--CCCEEEeeCChHHHHHHHHHHHHc---CC------eeEEEEeCCCCCchHHHHHHHHHhCCCc
Q 006152 440 ADRVIVKHAVT-KIR--DGDVLLTYGSSSAVEMILQHAHEL---GK------QFRVVIVDSRPKHEGKLLLRRLVRKGLS 507 (658)
Q Consensus 440 a~~~Ia~~a~~-~I~--dgdvILT~g~SsaV~~vL~~A~e~---gk------~f~ViV~ESRP~~EG~~La~eL~~~GI~ 507 (658)
..++|++.|++ +|+ +|++|. .|.+|++..+++...+. +. .++| |+-| ...+.+|.+.||+
T Consensus 21 ~K~~IA~~Aa~~~I~~~dg~~Ig-LgsGST~~~~a~~L~~~~~~~~l~~~~~~itv-VTnS------~~~a~~l~~~gi~ 92 (264)
T 1xtz_A 21 AKRAAAYRAVDENLKFDDHKIIG-IGSGSTVVYVAERIGQYLHDPKFYEVASKFIC-IPTG------FQSRNLILDNKLQ 92 (264)
T ss_dssp HHHHHHHHHHHHHCCTTTCCEEE-ECCCSSTHHHHHHHHHHHTSTTTHHHHTTCEE-EESS------HHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHhccCCCCCCEEE-EcChHHHHHHHHHHhHhhhccccccccCCEEE-ECCc------HHHHHHHHHCCCe
Confidence 44679999998 999 999988 56655555677766543 22 3665 4433 3456777788987
Q ss_pred EEEEcchHHHHHhhhccEEEEcceeEecCCCeecccchHHHHH-HHhhCCCCeEeeccccccc-ccc
Q 006152 508 CTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAM-VAYGFHIPVLVCCEAYKFH-ERV 572 (658)
Q Consensus 508 vT~I~DsAv~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl-~Ak~~~VPVyV~aetyKf~-~~~ 572 (658)
+..+ .. +.++|+.|+|||.|-.++.++.--|-+.+-- +......-|||+|+..||. ++.
T Consensus 93 v~~l--~~----~~~iD~afdGADgId~~~~likg~g~A~~kekiva~~A~~~IvlaD~SK~~~~~L 153 (264)
T 1xtz_A 93 LGSI--EQ----YPRIDIAFDGADEVDENLQLIKGGGACLFQEKLVSTSAKTFIVVADSRKKSPKHL 153 (264)
T ss_dssp ECCT--TT----CCSEEEEEECCSEECTTSCEECCTTSCHHHHHHHHTTEEEEEEEEEGGGBCSSSB
T ss_pred EEEe--hh----cCcCCEEEECCcccCCCCCeecCHHHHHHHHHHHHHhhCcEEEEEEccccccccc
Confidence 6555 22 2589999999999998876665555544433 2334566899999999999 643
No 17
>1o8b_A Ribose 5-phosphate isomerase; RPIA, PSI, protein ST initiative, MCSG, midwest center for structural genomics; HET: ABF; 1.25A {Escherichia coli} SCOP: c.124.1.4 d.58.40.1 PDB: 1lkz_A 1ks2_A* 3enq_A 3env_A* 3enw_A*
Probab=97.28 E-value=4.4e-05 Score=76.52 Aligned_cols=119 Identities=13% Similarity=0.147 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHhccCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHH
Q 006152 440 ADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYI 519 (658)
Q Consensus 440 a~~~Ia~~a~~~I~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~ 519 (658)
..++|++.|+++|++|++|.- +.||++..+++...+...+++|.|+-|-+ .+.+|.+.||++..+ +.
T Consensus 6 ~K~~IA~~Aa~lI~dg~~I~L-dsGST~~~la~~L~~~~~~itv~VTnS~~------~a~~l~~~gi~vi~l--~~---- 72 (219)
T 1o8b_A 6 LKKAVGWAALQYVQPGTIVGV-GTGSTAAHFIDALGTMKGQIEGAVSSSDA------STEKLKSLGIHVFDL--NE---- 72 (219)
T ss_dssp -----------------CEEE-CCSCC---------------CCEEESCCC------------------CCG--GG----
T ss_pred HHHHHHHHHHHhCCCCCEEEE-cChHHHHHHHHHHhccCCCEEEEECCcHH------HHHHHHhCCCeEEEe--Cc----
Confidence 446789999999999999984 55555546666664332156664666543 234555567765443 22
Q ss_pred hhhccEEEEcceeEecCCCeecccchHHHH--HHHhhCCCCeEeecccccccccc
Q 006152 520 IHEVTRVFLGASSVLSNGTVCSRVGTACVA--MVAYGFHIPVLVCCEAYKFHERV 572 (658)
Q Consensus 520 M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lA--l~Ak~~~VPVyV~aetyKf~~~~ 572 (658)
+.++|+.|+|||.|-.++.+..--|-+.+- +++. ...-+|++|+..||....
T Consensus 73 ~~~~D~af~Gadgid~~~~~~~~~~~a~~kekiv~~-~A~~~ivlaD~SK~~~~l 126 (219)
T 1o8b_A 73 VDSLGIYVDGADEINGHMQMIKGGGAALTREKIIAS-VAEKFICIADASKQVDIL 126 (219)
T ss_dssp CSCEEEEEECCSEECTTSCEECCCCC-HHHHHHHHH-HEEEEEEEEEGGGBCSSB
T ss_pred cCcCCEEEECcceECCCCCeecCHHHHHHHHHHHHH-hcCcEEEEEeCccccccc
Confidence 248999999999999887766443444443 3333 333899999999998764
No 18
>3l7o_A Ribose-5-phosphate isomerase A; RPIA; 1.70A {Streptococcus mutans}
Probab=97.15 E-value=0.001 Score=67.06 Aligned_cols=118 Identities=14% Similarity=0.089 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHhccCCCEEEeeCChHHHHHHHHHHHHc----CCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchH
Q 006152 440 ADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHEL----GKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINA 515 (658)
Q Consensus 440 a~~~Ia~~a~~~I~dgdvILT~g~SsaV~~vL~~A~e~----gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsA 515 (658)
..+.|++.|+++|++|++|..=+-|| +..+++...+. +.++++ |+-| .+.+..|.+.||++..+.+
T Consensus 4 ~K~~iA~~A~~~V~dg~vIgLGsGST-~~~~i~~L~~~~~~~~~~i~~-VttS------~~t~~~l~~~Gi~l~~l~~-- 73 (225)
T 3l7o_A 4 LKKIAGVRAAQYVEDGMIVGLGTGST-AYYFVEEVGRRVQEEGLQVIG-VTTS------SRTTAQAQALGIPLKSIDE-- 73 (225)
T ss_dssp HHHHHHHHHHTTCCTTCEEEECCSTT-HHHHHHHHHHHHHHHCCCCEE-EESS------HHHHHHHHHHTCCBCCGGG--
T ss_pred HHHHHHHHHHHhCCCCCEEEECCcHH-HHHHHHHHHHhhhhcCCCEEE-EcCC------HHHHHHHhccCceEEecCc--
Confidence 34578999999999999877644444 44666665443 556666 4433 3445677778998865432
Q ss_pred HHHHhhhccEEEEcceeEecCCCeecccchHHH--HHHHhhCCCCeEeecccccccccc
Q 006152 516 ISYIIHEVTRVFLGASSVLSNGTVCSRVGTACV--AMVAYGFHIPVLVCCEAYKFHERV 572 (658)
Q Consensus 516 v~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~l--Al~Ak~~~VPVyV~aetyKf~~~~ 572 (658)
..++|+.|.|||.|-.+..++---|.+.+ -++| ....-|||+++..||.++.
T Consensus 74 ----~~~iD~a~dGADevd~~~~liKGgG~al~rEKiva-~~A~~~iviaD~sK~~~~L 127 (225)
T 3l7o_A 74 ----VDSVDVTVDGADEVDPNFNGIKGGGGALLMEKIVG-TLTKDYIWVVDESKMVDTL 127 (225)
T ss_dssp ----SSCEEEEEECCSEECTTSCEECCTTSCHHHHHHHH-HTEEEEEEEEEGGGBCSSS
T ss_pred ----ccccCEEEEcCCccCcccCeecCchhhhHHHHHHH-HhCCeEEEEEecccchhhc
Confidence 34899999999999999888765544333 2232 2345789999999999764
No 19
>2pjm_A Ribose-5-phosphate isomerase A; 3D-structure, structural genomics, pentose phosphate pathway, carbon fixation, NPPSFA; 1.78A {Methanocaldococcus jannaschii} PDB: 3ixq_A*
Probab=97.11 E-value=0.0022 Score=64.65 Aligned_cols=117 Identities=15% Similarity=0.068 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHhccCCCEEEeeCChHHHHHHHHHHHHc----CCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchH
Q 006152 440 ADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHEL----GKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINA 515 (658)
Q Consensus 440 a~~~Ia~~a~~~I~dgdvILT~g~SsaV~~vL~~A~e~----gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsA 515 (658)
..++|++.|+++|++|++|..=+.|| +..+++...+. +.++++ |+-| ...+..|.+.||++.-+ +.
T Consensus 6 ~K~~iA~~A~~~I~~g~~IglgsGST-~~~~~~~L~~~~~~~~l~itv-VtnS------~~~a~~l~~~gi~v~~l--~~ 75 (226)
T 2pjm_A 6 LKLKVAKEAVKLVKDGMVIGLGTGST-AALFIRELGNRIREEELTVFG-IPTS------FEAKMLAMQYEIPLVTL--DE 75 (226)
T ss_dssp HHHHHHHHHGGGCCTTCEEEECCSHH-HHHHHHHHHHHHHHHTCCCEE-EESS------HHHHHHHHHTTCCBCCT--TT
T ss_pred HHHHHHHHHHHHCCCCCEEEECCCHH-HHHHHHHHHhhhhccCCcEEE-EeCc------HHHHHHHHhcCCeEEee--cc
Confidence 44679999999999999877655444 44666665432 335554 3332 34556788899987632 22
Q ss_pred HHHHhhhccEEEEcceeEecC-CCeecccchHHH-H-HHHhhCCCCeEeecccccccccc
Q 006152 516 ISYIIHEVTRVFLGASSVLSN-GTVCSRVGTACV-A-MVAYGFHIPVLVCCEAYKFHERV 572 (658)
Q Consensus 516 v~~~M~~Vd~VlvGAdaV~aN-G~VvNKiGT~~l-A-l~Ak~~~VPVyV~aetyKf~~~~ 572 (658)
+. +|+.|.|||.|-.+ +.++---|.+.+ - ++| ....-|||++...||.++.
T Consensus 76 ----~~-iD~afdGaDevd~~t~~likGgg~al~rEKiva-~~A~~~IviaD~sK~~~~L 129 (226)
T 2pjm_A 76 ----YD-VDIAFDGADEVEETTLFLIKGGGGCHTQEKIVD-YNANEFVVLVDESKLVKKL 129 (226)
T ss_dssp ----CC-CSEEEECCSEEETTTCCEECCTTSCHHHHHHHH-HHSSEEEEEEEGGGEESST
T ss_pred ----cc-CCEEEEcCceeccccCceeeccchhhHHHHHHH-HHhCcEEEEEecchhhhcc
Confidence 23 99999999999999 766554443322 1 222 2345789999999999864
No 20
>3uw1_A Ribose-5-phosphate isomerase A; ssgcid, seattle structural genomics center for infectious DI isomerase, ribose isomerase; HET: R5P; 1.71A {Burkholderia thailandensis} PDB: 3u7j_A*
Probab=96.24 E-value=0.0071 Score=61.42 Aligned_cols=119 Identities=17% Similarity=0.204 Sum_probs=78.9
Q ss_pred HHHHHHHHHHhccC----CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHH
Q 006152 441 DRVIVKHAVTKIRD----GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAI 516 (658)
Q Consensus 441 ~~~Ia~~a~~~I~d----gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv 516 (658)
.+.|++.|+++|++ |++|-. |.+|++..+++...+..++++.+|.-| .+.+..|.+.||++..+.+
T Consensus 15 K~~aA~~A~~~V~d~~~~g~vIGL-GtGST~~~~i~~L~~~~~~i~~~V~tS------~~t~~~~~~~Gi~l~~l~~--- 84 (239)
T 3uw1_A 15 KRLVGEAAARYVTDNVPQGAVIGV-GTGSTANCFIDALAAVKDRYRGAVSSS------VATTERLKSHGIRVFDLNE--- 84 (239)
T ss_dssp HHHHHHHHHHHHHHHSCTTCEEEE-CCSHHHHHHHHHHHTTGGGSCEEEESS------HHHHHHHHHTTCCBCCGGG---
T ss_pred HHHHHHHHHHHhhccCcCCCEEEE-CccHHHHHHHHHHHhhhccceEEeCCc------HHHHHHHHHcCCcEEeccc---
Confidence 34567777778877 887665 666666577777765444565445443 3556778889998864322
Q ss_pred HHHhhhccEEEEcceeEecCCCeecccchHHHH-HHHhhCCCCeEeecccccccccc
Q 006152 517 SYIIHEVTRVFLGASSVLSNGTVCSRVGTACVA-MVAYGFHIPVLVCCEAYKFHERV 572 (658)
Q Consensus 517 ~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lA-l~Ak~~~VPVyV~aetyKf~~~~ 572 (658)
..++|+.|.|||-|-.++.++--=|.+.+= =+......-|||+++..||.++.
T Consensus 85 ---~~~iD~a~DGADeVd~~l~lIKGgGgal~rEKiva~~A~~~ivIaD~sK~v~~L 138 (239)
T 3uw1_A 85 ---IESLQVYVDGADEIDESGAMIKGGGGALTREKIVASVAETFVCIADASKRVAML 138 (239)
T ss_dssp ---CSCEEEEEECCSEECTTCCEECCSSSCHHHHHHHHHHEEEEEEEEEGGGBCSSB
T ss_pred ---ccccCEEEECCcccCcccCEecCchHHHHHHHHHHHhCCcEEEEEecchhhhhc
Confidence 148999999999999998776633332211 11112234689999999999764
No 21
>4gmk_A Ribose-5-phosphate isomerase A; D-ribose-5-phosphate isomerase family, ribose 5-phosphate isomerisation; 1.72A {Lactobacillus salivarius}
Probab=91.42 E-value=0.48 Score=47.71 Aligned_cols=117 Identities=16% Similarity=0.147 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHhccCCCEEEeeCChHHHHHHHHHHHHcC--CeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHH
Q 006152 440 ADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELG--KQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAIS 517 (658)
Q Consensus 440 a~~~Ia~~a~~~I~dgdvILT~g~SsaV~~vL~~A~e~g--k~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~ 517 (658)
..+..++.|+++|++|. |+=.|.+||+..+++...+.. ..+.+.++-| ..+....+.+.||++.-+.+.
T Consensus 7 ~K~~aa~~A~~~V~~gm-vvGlGTGSTv~~~i~~L~~~~~~~~l~i~~V~t-----S~~t~~~a~~~Gi~l~~l~~~--- 77 (228)
T 4gmk_A 7 LKQLVGTKAVEWIKDGM-IVGLGTGSTVKYMVDALGKRVNEEGLDIVGVTT-----SIRTAEQAKSLGIVIKDIDEV--- 77 (228)
T ss_dssp HHHHHHHHHGGGCCTTC-EEEECCSHHHHHHHHHHHHHHHHHCCCCEEEES-----SHHHHHHHHHTTCCBCCGGGS---
T ss_pred HHHHHHHHHHHhCCCCC-EEEECchHHHHHHHHHHHHHHhhcCCcEEEEeC-----cHHHHHHHHHcCCceeChHHC---
Confidence 44567788999999987 456777777777777664421 1223333332 223446677889998765542
Q ss_pred HHhhhccEEEEcceeEecCCCeecccchH-----HHHHHHhhCCCCeEeecccccccccc
Q 006152 518 YIIHEVTRVFLGASSVLSNGTVCSRVGTA-----CVAMVAYGFHIPVLVCCEAYKFHERV 572 (658)
Q Consensus 518 ~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~-----~lAl~Ak~~~VPVyV~aetyKf~~~~ 572 (658)
.++|..|=|||-|-.|..++--=|.+ .+|.+|++ |+|++...|+.++.
T Consensus 78 ---~~iD~~iDGADEvd~~l~lIKGGGgal~rEKivA~~a~~----fI~IaD~sK~v~~L 130 (228)
T 4gmk_A 78 ---DHIDLTIDGADEISSDFQGIKGGGAALLYEKIVATKSNK----NMWIVDESKMVDDL 130 (228)
T ss_dssp ---SCEEEEEECCSEECTTSCEECCTTSCHHHHHHHHHHEEE----EEEEEEGGGBCSSS
T ss_pred ---CccceEeccHHHhhhchhhhhcchHHHHHHHHHHHhhhh----eEEEeccccccCcc
Confidence 37999999999999998877555543 34444444 89999999998764
No 22
>3ixq_A Ribose-5-phosphate isomerase A; structural genomics, pentose phosphate pathway, carbon fixation, NPPSFA; HET: PGO; 1.78A {Methanocaldococcus jannaschii}
Probab=88.07 E-value=1.1 Score=45.11 Aligned_cols=118 Identities=15% Similarity=0.143 Sum_probs=73.7
Q ss_pred HHHHHHHHHHhccCCCEEEeeCChHHHHHHHHHHHHcC--CeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHH
Q 006152 441 DRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELG--KQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISY 518 (658)
Q Consensus 441 ~~~Ia~~a~~~I~dgdvILT~g~SsaV~~vL~~A~e~g--k~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~ 518 (658)
.+..++.|+++|++|.+ +=.|.+||+..+|....+.. ....|+++.|. .+....+.+.||+++.+.+ +
T Consensus 7 K~~aa~~A~~~V~~gmv-vGlGTGSTv~~~I~~L~~~~~~~~l~i~~v~tS-----~~t~~~a~~~gi~l~~l~~--~-- 76 (226)
T 3ixq_A 7 KLKVAKEAVKLVKDGMV-IGLGTGSTAALFIRELGNRIREEELTVFGIPTS-----FEAKMLAMQYEIPLVTLDE--Y-- 76 (226)
T ss_dssp HHHHHHHHGGGCCTTCE-EEECCSHHHHHHHHHHHHHHHHHTCCCEEEESS-----HHHHHHHHHTTCCBCCTTT--C--
T ss_pred HHHHHHHHHHhCCCCCE-EEeCcHHHHHHHHHHHHHhhhhcCCeeEeeccc-----HHHHHHHHhcCCCcccccc--c--
Confidence 34567889999999874 56788888878887765421 12345554442 2333456678999765533 1
Q ss_pred HhhhccEEEEcceeEecCC-CeecccchHHHH--HHHhhCCCCeEeecccccccccc
Q 006152 519 IIHEVTRVFLGASSVLSNG-TVCSRVGTACVA--MVAYGFHIPVLVCCEAYKFHERV 572 (658)
Q Consensus 519 ~M~~Vd~VlvGAdaV~aNG-~VvNKiGT~~lA--l~Ak~~~VPVyV~aetyKf~~~~ 572 (658)
.+|..|=|||-|-..+ .++--=|.+.+= ++| ....-|+|+++..|+.+..
T Consensus 77 ---~iDl~iDGADEvd~~~l~lIKGGGgAl~rEKivA-~~a~~~I~I~D~sK~v~~L 129 (226)
T 3ixq_A 77 ---DVDIAFDGADEVEETTLFLIKGGGGCHTQEKIVD-YNANEFVVLVDESKLVKKL 129 (226)
T ss_dssp ---CCSEEEECCSEEETTTCCEECCTTSCHHHHHHHH-HHSSEEEEEEEGGGEESST
T ss_pred ---cccEEEeCcchhccccceEEecchHHHHHHHHHH-HHhhheEEEeccccchhhc
Confidence 3899999999997433 333333332211 222 2345679999999998753
No 23
>2hj0_A Putative citrate lyase, ALFA subunit; alpha beta protein., structural genomics, PSI-2, protein STR initiative; HET: CIT; 2.70A {Streptococcus mutans}
Probab=80.03 E-value=15 Score=41.03 Aligned_cols=150 Identities=21% Similarity=0.228 Sum_probs=86.8
Q ss_pred HHHHHHHHHHhc------cCCCEEEeeCCh---HHHHHHHHHH-HHcCCeeEE---EEeCCCCCchHHHHHHHHHhCCCc
Q 006152 441 DRVIVKHAVTKI------RDGDVLLTYGSS---SAVEMILQHA-HELGKQFRV---VIVDSRPKHEGKLLLRRLVRKGLS 507 (658)
Q Consensus 441 ~~~Ia~~a~~~I------~dgdvILT~g~S---saV~~vL~~A-~e~gk~f~V---iV~ESRP~~EG~~La~eL~~~GI~ 507 (658)
.+.|+++++++| +||.+|= +|-+ .+|...|..- .+.+-.-.+ -+.+ -...|.++|.-
T Consensus 253 ~~~IA~~~a~~i~~~g~l~dG~~lq-lGiG~ip~aV~~~L~~~~~~l~i~se~g~~g~~~---------~~~~lieaG~i 322 (519)
T 2hj0_A 253 ELLIAEYAAKVITSSPYYKEGFSFQ-TGTGGASLAVTRFMREQMIKDDIKANFALGGITN---------AMVELLEEGLV 322 (519)
T ss_dssp HHHHHHHHHHHHHTSTTCSTTCEEE-CCSSHHHHHHHHHHHHHHHHSCCCEEEECSEECH---------HHHHHHHTTSE
T ss_pred HHHHHHHHHHHHHhcccCCCCCEEE-eccChHHHHHHHHHhhhcccceeeeceeccCcCh---------hHHHHHHCCCC
Confidence 456888888885 9995543 3444 4566666554 333333333 1111 13455566532
Q ss_pred E-E--------------------EEcchHHHH--------HhhhccEEEEcceeEecCCCeeccc-----------chHH
Q 006152 508 C-T--------------------YTHINAISY--------IIHEVTRVFLGASSVLSNGTVCSRV-----------GTAC 547 (658)
Q Consensus 508 v-T--------------------~I~DsAv~~--------~M~~Vd~VlvGAdaV~aNG~VvNKi-----------GT~~ 547 (658)
- + .+.++...| ++.+.|..|+||=-|-.+|.+.|-. |...
T Consensus 323 ~~~~~~~~f~~G~~~~~~~n~~~~~~~~~~~~~n~~n~p~~i~~ldv~ilga~eVD~~Gnvn~~~~~gg~~~~G~GG~~D 402 (519)
T 2hj0_A 323 DKILDVQDFDHPSAVSLDRNAEKHYEIDANMYASPLSKGSVINQLDICVLSALEVDTNFNVNVMTGSDGVIRGASGGHCD 402 (519)
T ss_dssp EEEEESEESSHHHHHHHHHTTTTEEECCHHHHHCSSSSCCGGGGCSEEEECCSEECTTCCEECSBCTTCCBCCBCTTHHH
T ss_pred CCCccccccccchHHHHHhCcHhhEEEchHHhhccCCCHHHhccCCeeeeeeEEEccCCceeeeeccCCeEecccccHHH
Confidence 2 1 233445555 4678999999999999999888766 2344
Q ss_pred HHHHHhhCCCCeEeecccccccccccCCcccccccCCcccccccCCccccccCCCccCCCCceeccceeeecCCCCccEE
Q 006152 548 VAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGDPDSISKVPGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLI 627 (658)
Q Consensus 548 lAl~Ak~~~VPVyV~aetyKf~~~~~~ds~~~nElrdp~Ev~~~~g~~~~~~l~~~~~~~~l~v~Np~FDvTPpeLIT~I 627 (658)
++.-|+. +++|+++.+ +. .+. +. +.+ .+=.||-+.++.|
T Consensus 403 ~~~gA~~----~ii~~~~t~-------g~-------~sk-iV-----------------~~~-----~~vtt~~~~V~~V 441 (519)
T 2hj0_A 403 TAFAAKM----SLVISPLVR-------GR-------IPT-FV-----------------DKV-----NTVITPGTSVDVV 441 (519)
T ss_dssp HHHHSSE----EEEECCSEE-------TT-------EES-BC-----------------SSC-----SSCSBCGGGCCEE
T ss_pred HhhccCe----EEEEEcccC-------CC-------CCe-ec-----------------cCC-----CCcccCCCCCCEE
Confidence 4555553 677777542 10 000 00 000 1223466789999
Q ss_pred EeCCCCcC-CCcchH
Q 006152 628 ITDYGMVS-HTLVSV 641 (658)
Q Consensus 628 ITE~Gii~-PssVpv 641 (658)
|||+|++. +....+
T Consensus 442 VTE~Gva~~l~g~~l 456 (519)
T 2hj0_A 442 VTEVGIAINPNRPDL 456 (519)
T ss_dssp ECSSCEEECTTCHHH
T ss_pred ECCCEEEECCCCCCH
Confidence 99999998 665543
No 24
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=79.79 E-value=10 Score=31.53 Aligned_cols=98 Identities=15% Similarity=0.071 Sum_probs=61.7
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc---hHHHHHhhhccEEEEcce
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI---NAISYIIHEVTRVFLGAS 531 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D---sAv~~~M~~Vd~VlvGAd 531 (658)
+..|+..|.+..=..+++.+.+.| .++|++++-.+. -+..+...|+....... ..+..++..+|.||..+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g-~~~v~~~~r~~~-----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~- 77 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSS-NYSVTVADHDLA-----ALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAA- 77 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCS-SEEEEEEESCHH-----HHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECS-
T ss_pred cCeEEEECCCHHHHHHHHHHHhCC-CceEEEEeCCHH-----HHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECC-
Confidence 457888888654334455555555 367888775432 12344466766543322 34555677888888765
Q ss_pred eEecCCCeecccchHHHHHHHhhCCCCeEeecccccc
Q 006152 532 SVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKF 568 (658)
Q Consensus 532 aV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~aetyKf 568 (658)
| ...+..++..|...+++++.++....+
T Consensus 78 -----~----~~~~~~~~~~~~~~g~~~~~~~~~~~~ 105 (118)
T 3ic5_A 78 -----P----FFLTPIIAKAAKAAGAHYFDLTEDVAA 105 (118)
T ss_dssp -----C----GGGHHHHHHHHHHTTCEEECCCSCHHH
T ss_pred -----C----chhhHHHHHHHHHhCCCEEEecCcHHH
Confidence 1 224678888999999999988765543
No 25
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=78.87 E-value=11 Score=38.88 Aligned_cols=104 Identities=9% Similarity=0.056 Sum_probs=58.2
Q ss_pred cCCCEEEeeCChHHHHHHHHHHH--HcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch---------HHHHHh-
Q 006152 453 RDGDVLLTYGSSSAVEMILQHAH--ELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN---------AISYII- 520 (658)
Q Consensus 453 ~dgdvILT~g~SsaV~~vL~~A~--e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds---------Av~~~M- 520 (658)
....+++|-|.+.++..++..+. +.|...+|++. .|.+.+...+ +...|+.+..+... .+-..+
T Consensus 104 ~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~--~p~~~~~~~~--~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~ 179 (437)
T 3g0t_A 104 PARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFI--DPGFNLNKLQ--CRILGQKFESFDLFEYRGEKLREKLESYLQ 179 (437)
T ss_dssp CGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEE--ESCCHHHHHH--HHHHTCCCEEEEGGGGCTTHHHHHHHHHHT
T ss_pred CcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEe--CCCcHhHHHH--HHHcCCEEEEEeecCCCCccCHHHHHHHHh
Confidence 34578888887778866666554 44442256665 4667664433 34568888777532 223333
Q ss_pred -hhccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 521 -HEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 521 -~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
.++..|++ +.--...|.++..---..|+-+|++|++.+++
T Consensus 180 ~~~~~~v~l-~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~ 220 (437)
T 3g0t_A 180 TGQFCSIIY-SNPNNPTWQCMTDEELRIIGELATKHDVIVIE 220 (437)
T ss_dssp TTCCCEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCceEEEE-eCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEE
Confidence 24555655 22112233333322233467789999998776
No 26
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=78.55 E-value=21 Score=30.91 Aligned_cols=60 Identities=27% Similarity=0.290 Sum_probs=35.5
Q ss_pred HHHHhCCCcE---EE-Ec-chHHHHHh---h--hccEEEEcceeEecCCCeec-ccchHHHHHHHhhCCCCeEee
Q 006152 499 RRLVRKGLSC---TY-TH-INAISYII---H--EVTRVFLGASSVLSNGTVCS-RVGTACVAMVAYGFHIPVLVC 562 (658)
Q Consensus 499 ~eL~~~GI~v---T~-I~-DsAv~~~M---~--~Vd~VlvGAdaV~aNG~VvN-KiGT~~lAl~Ak~~~VPVyV~ 562 (658)
..+.+.|+++ +. +. .+....++ + ++|.|++|+.. .|.+-. -.|+..-. +.++.++||+|+
T Consensus 77 ~~~~~~g~~~~~~~~~~~~g~~~~~I~~~a~~~~~dliV~G~~~---~~~~~~~~~Gs~~~~-vl~~~~~pVlvV 147 (147)
T 3hgm_A 77 TRATELGVPADKVRAFVKGGRPSRTIVRFARKRECDLVVIGAQG---TNGDKSLLLGSVAQR-VAGSAHCPVLVV 147 (147)
T ss_dssp HHHHHTTCCGGGEEEEEEESCHHHHHHHHHHHTTCSEEEECSSC---TTCCSCCCCCHHHHH-HHHHCSSCEEEC
T ss_pred HHHHhcCCCccceEEEEecCCHHHHHHHHHHHhCCCEEEEeCCC---CccccceeeccHHHH-HHhhCCCCEEEC
Confidence 3456689877 43 22 23333333 3 69999999975 233333 24665444 455667999985
No 27
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=78.47 E-value=7.8 Score=38.57 Aligned_cols=109 Identities=12% Similarity=0.059 Sum_probs=68.1
Q ss_pred HHHHHHHhccCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCC------------------chHHHHHHHHHhC-
Q 006152 444 IVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPK------------------HEGKLLLRRLVRK- 504 (658)
Q Consensus 444 Ia~~a~~~I~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~------------------~EG~~La~eL~~~- 504 (658)
++..+.+.+. +..||..|.+.+=..++..+...|.. ++.++|.... ..-..++.+|.+.
T Consensus 21 ~g~~~q~~l~-~~~VlVvG~Gg~G~~va~~La~~Gv~-~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n 98 (249)
T 1jw9_B 21 FDFDGQEALK-DSRVLIVGLGGLGCAASQYLASAGVG-NLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRIN 98 (249)
T ss_dssp THHHHHHHHH-HCEEEEECCSHHHHHHHHHHHHHTCS-EEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC
T ss_pred cCHHHHHHHh-CCeEEEEeeCHHHHHHHHHHHHcCCC-eEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHC
Confidence 4555555665 47889999886654556666666753 4455554431 1223344666653
Q ss_pred -CCcEEEEc----chHHHHHhhhccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEeec
Q 006152 505 -GLSCTYTH----INAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCC 563 (658)
Q Consensus 505 -GI~vT~I~----DsAv~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~a 563 (658)
++.++.+. +..+..++.++|.||...|..- --+.+.-.|+.+++|++.++
T Consensus 99 p~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~---------~~~~l~~~~~~~~~p~i~~~ 153 (249)
T 1jw9_B 99 PHIAITPVNALLDDAELAALIAEHDLVLDCTDNVA---------VRNQLNAGCFAAKVPLVSGA 153 (249)
T ss_dssp TTSEEEEECSCCCHHHHHHHHHTSSEEEECCSSHH---------HHHHHHHHHHHHTCCEEEEE
T ss_pred CCcEEEEEeccCCHhHHHHHHhCCCEEEEeCCCHH---------HHHHHHHHHHHcCCCEEEee
Confidence 56666543 2344556789999998876542 23667778888999988763
No 28
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=78.39 E-value=5.2 Score=40.64 Aligned_cols=102 Identities=15% Similarity=0.114 Sum_probs=63.9
Q ss_pred CCEEEeeCChHHHHHHH-HHHHHcCCeeEEEEeCCCC--CchHHHHHHHHHhCCCcEEEEcc---hHHHHHhhhccEEEE
Q 006152 455 GDVLLTYGSSSAVEMIL-QHAHELGKQFRVVIVDSRP--KHEGKLLLRRLVRKGLSCTYTHI---NAISYIIHEVTRVFL 528 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL-~~A~e~gk~f~ViV~ESRP--~~EG~~La~eL~~~GI~vT~I~D---sAv~~~M~~Vd~Vlv 528 (658)
+.+||..|-+.-+...| +.+.+.| ++|+++.-.+ ..+-......|...|+.+..... ..+..++.+.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~----- 82 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAH--RPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEH----- 82 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTT--CCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHT-----
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC--CCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhC-----
Confidence 34678887755544433 4444556 4566665444 22333445677788887655432 3455666621
Q ss_pred cceeEecCCCeecccchHHHHHHHhhCC-CCeEeec
Q 006152 529 GASSVLSNGTVCSRVGTACVAMVAYGFH-IPVLVCC 563 (658)
Q Consensus 529 GAdaV~aNG~VvNKiGT~~lAl~Ak~~~-VPVyV~a 563 (658)
|+|.|+.+.+..|-.|+..+.-+|+..+ ++.+|.+
T Consensus 83 ~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~S 118 (346)
T 3i6i_A 83 EIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPS 118 (346)
T ss_dssp TCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEECS
T ss_pred CCCEEEECCchhhHHHHHHHHHHHHHcCCceEEeec
Confidence 4455555556679999999999999999 9988863
No 29
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=74.99 E-value=26 Score=30.26 Aligned_cols=59 Identities=15% Similarity=0.077 Sum_probs=34.4
Q ss_pred HHHhCCC-cEEEE--cchHHHHHhh------hccEEEEcceeEecCCCeec-ccchHHHHHHHhhCCCCeEee
Q 006152 500 RLVRKGL-SCTYT--HINAISYIIH------EVTRVFLGASSVLSNGTVCS-RVGTACVAMVAYGFHIPVLVC 562 (658)
Q Consensus 500 eL~~~GI-~vT~I--~DsAv~~~M~------~Vd~VlvGAdaV~aNG~VvN-KiGT~~lAl~Ak~~~VPVyV~ 562 (658)
.+.+.|+ +++.. ..+....++. ++|.|++|+..- |.+-. -.|+..-.+ .++.++||+|+
T Consensus 77 ~~~~~g~~~~~~~~~~g~~~~~I~~~~a~~~~~dliV~G~~~~---~~~~~~~~Gs~~~~v-l~~~~~pVlvV 145 (146)
T 3s3t_A 77 FVATTSAPNLKTEISYGIPKHTIEDYAKQHPEIDLIVLGATGT---NSPHRVAVGSTTSYV-VDHAPCNVIVI 145 (146)
T ss_dssp HHTTSSCCCCEEEEEEECHHHHHHHHHHHSTTCCEEEEESCCS---SCTTTCSSCHHHHHH-HHHCSSEEEEE
T ss_pred HHHhcCCcceEEEEecCChHHHHHHHHHhhcCCCEEEECCCCC---CCcceEEEcchHHHH-hccCCCCEEEe
Confidence 3445788 66543 2233333333 699999999752 22222 256654444 56667999986
No 30
>1poi_B Glutaconate coenzyme A-transferase; COA, glutamate, protein fermentation; 2.50A {Acidaminococcus fermentans} SCOP: c.124.1.3
Probab=74.80 E-value=15 Score=37.35 Aligned_cols=93 Identities=15% Similarity=0.234 Sum_probs=54.7
Q ss_pred HHHHHHHHHHhccCCCEEEe-eCChHHHHHHHHHHHHcCCeeEEEE----eCCCCCc---hHHHHHHHHHhCCCcEEEEc
Q 006152 441 DRVIVKHAVTKIRDGDVLLT-YGSSSAVEMILQHAHELGKQFRVVI----VDSRPKH---EGKLLLRRLVRKGLSCTYTH 512 (658)
Q Consensus 441 ~~~Ia~~a~~~I~dgdvILT-~g~SsaV~~vL~~A~e~gk~f~ViV----~ESRP~~---EG~~La~eL~~~GI~vT~I~ 512 (658)
.+.|+.++++.|+||++|-+ +|-..++..++.+.+ ++.+.+.. +...|.. .+.. ..|.. .+..+.
T Consensus 8 ~e~Ia~~aA~~i~dG~~v~lGiGiP~~va~~~~~~~--~~~l~l~~E~G~lg~~p~~~~~~~~d--~~~~~---~a~~~~ 80 (260)
T 1poi_B 8 KEMQAVTIAKQIKNGQVVTVGTGLPLIGASVAKRVY--APDCHIIVESGLMDCSPVEVPRSVGD--LRFMA---HCGCIW 80 (260)
T ss_dssp HHHHHHHHHTTCCTTCEEECCSSHHHHHHHHHHHTT--CTTCEEEETTTEEEECCSSCCSSTTC--HHHHT---SEEEEC
T ss_pred HHHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHHhc--CCCEEEEEeCceecCcccCcccCccC--CCcEe---ehhhhc
Confidence 45799999999999997765 242344544443322 44454442 2234421 1110 11111 244566
Q ss_pred chHHHHH------hh--hccEEEEcceeEecCCCee
Q 006152 513 INAISYI------IH--EVTRVFLGASSVLSNGTVC 540 (658)
Q Consensus 513 DsAv~~~------M~--~Vd~VlvGAdaV~aNG~Vv 540 (658)
++.-.|- +. ++|..|+||--|-.+|.+.
T Consensus 81 ~~~~~fd~~~~~~~~~g~~Dv~ilGa~qVD~~Gnvn 116 (260)
T 1poi_B 81 PNVRFVGFEINEYLHKANRLIAFIGGAQIDPYGNVN 116 (260)
T ss_dssp CHHHHHHHHHHHHHHTCCCEEEEECCSEECTTCCEE
T ss_pred CHHHHhcccchhhhhcCCccEEEeChHHhCCCCCcc
Confidence 6554443 33 7999999999999999998
No 31
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=71.62 E-value=18 Score=36.55 Aligned_cols=101 Identities=9% Similarity=0.148 Sum_probs=56.2
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch------------HHHHHhh
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN------------AISYIIH 521 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds------------Av~~~M~ 521 (658)
...+++|-|.+.++..++..+.+.| -+|++.+ |.+.+... .+...|+.+..+... .+-..+.
T Consensus 90 ~~~v~~~~g~~~a~~~~~~~~~~~g--d~vl~~~--~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~ 163 (391)
T 4dq6_A 90 SEWLIYSPGVIPAISLLINELTKAN--DKIMIQE--PVYSPFNS--VVKNNNRELIISPLQKLENGNYIMDYEDIENKIK 163 (391)
T ss_dssp GGGEEEESCHHHHHHHHHHHHSCTT--CEEEECS--SCCTHHHH--HHHHTTCEEEECCCEECTTSCEECCHHHHHHHCT
T ss_pred HHHeEEcCChHHHHHHHHHHhCCCC--CEEEEcC--CCCHHHHH--HHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhh
Confidence 4467888887778866666554333 3565543 77766543 344568777766422 2333333
Q ss_pred hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 522 EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 522 ~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
+ .++++=.+--...|.++..----.++-+|++|++.+++
T Consensus 164 ~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 202 (391)
T 4dq6_A 164 D-VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIIS 202 (391)
T ss_dssp T-EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred c-CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEe
Confidence 4 33332222222234444433344566689999998876
No 32
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=71.31 E-value=5.8 Score=43.75 Aligned_cols=108 Identities=12% Similarity=0.113 Sum_probs=49.5
Q ss_pred HHHHhccCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHH----------
Q 006152 447 HAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAI---------- 516 (658)
Q Consensus 447 ~a~~~I~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv---------- 516 (658)
.+-..|+.||+++..|....++.+........+.-+|+|+-. ..-|..++++|.+.|+++++|..+.-
T Consensus 315 ~~~~~l~~GD~L~v~g~~~~l~~~~~~~~~~~~~~~viIiG~--G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~i~ 392 (565)
T 4gx0_A 315 QRETVLTEQSLLVLAGTKSQLAALEYLIGEAPEDELIFIIGH--GRIGCAAAAFLDRKPVPFILIDRQESPVCNDHVVVY 392 (565)
T ss_dssp --------------------------------CCCCEEEECC--SHHHHHHHHHHHHTTCCEEEEESSCCSSCCSSCEEE
T ss_pred CCCcEeCCCCEEEEEeCHHHHHHHHHHhcCCCCCCCEEEECC--CHHHHHHHHHHHHCCCCEEEEECChHHHhhcCCEEE
Confidence 445567889999999988777654433322212256777765 45688999999999999999963321
Q ss_pred ----------HHHhhhccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEeeccc
Q 006152 517 ----------SYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEA 565 (658)
Q Consensus 517 ----------~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~aet 565 (658)
..-+.++|.|++..+. .-=+..+++.||+.+....|++-.
T Consensus 393 gD~t~~~~L~~agi~~ad~vi~~~~~---------d~~ni~~~~~ak~l~~~~~iiar~ 442 (565)
T 4gx0_A 393 GDATVGQTLRQAGIDRASGIIVTTND---------DSTNIFLTLACRHLHSHIRIVARA 442 (565)
T ss_dssp SCSSSSTHHHHHTTTSCSEEEECCSC---------HHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred eCCCCHHHHHhcCccccCEEEEECCC---------chHHHHHHHHHHHHCCCCEEEEEE
Confidence 1112356666655432 234577889999999875555543
No 33
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=71.15 E-value=7.4 Score=37.12 Aligned_cols=98 Identities=14% Similarity=0.072 Sum_probs=58.3
Q ss_pred CCCEEEeeCChHHHHHHH-HHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCC-cEEEEcchH--HHHHhhhccEEEEc
Q 006152 454 DGDVLLTYGSSSAVEMIL-QHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGL-SCTYTHINA--ISYIIHEVTRVFLG 529 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL-~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI-~vT~I~DsA--v~~~M~~Vd~VlvG 529 (658)
.|.+||..|-+.-+...| +.+.++| .+|+++.-++.. +.+|...|+ .+ +..|-. +...+..+|.||
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G--~~V~~~~R~~~~-----~~~~~~~~~~~~-~~~Dl~~~~~~~~~~~D~vi-- 89 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKG--HEPVAMVRNEEQ-----GPELRERGASDI-VVANLEEDFSHAFASIDAVV-- 89 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSGGG-----HHHHHHTTCSEE-EECCTTSCCGGGGTTCSEEE--
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCC--CeEEEEECChHH-----HHHHHhCCCceE-EEcccHHHHHHHHcCCCEEE--
Confidence 467888888876554433 4445555 467776544322 234555677 43 334422 223334455554
Q ss_pred ceeEecCCCee-----------cccchHHHHHHHhhCCCCeEeecccc
Q 006152 530 ASSVLSNGTVC-----------SRVGTACVAMVAYGFHIPVLVCCEAY 566 (658)
Q Consensus 530 AdaV~aNG~Vv-----------NKiGT~~lAl~Ak~~~VPVyV~aety 566 (658)
.|.+.. |-.||..+.-+|+..++.-+|..-+|
T Consensus 90 -----~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~ 132 (236)
T 3e8x_A 90 -----FAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSV 132 (236)
T ss_dssp -----ECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCT
T ss_pred -----ECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecC
Confidence 443332 77899999999999998877776664
No 34
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=71.10 E-value=4.9 Score=46.54 Aligned_cols=46 Identities=24% Similarity=0.311 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHcCCeeEEEEeCCCCCch--HHHHHHHHHhCCCcEEEE
Q 006152 466 AVEMILQHAHELGKQFRVVIVDSRPKHE--GKLLLRRLVRKGLSCTYT 511 (658)
Q Consensus 466 aV~~vL~~A~e~gk~f~ViV~ESRP~~E--G~~La~eL~~~GI~vT~I 511 (658)
-|...|.+|+++|++.+|+|.-.....+ ....++.|.++|+.|.|-
T Consensus 385 ~Iv~ALi~AA~rGv~V~vLvel~arfdee~ni~wa~~Le~aGv~Vv~g 432 (705)
T 2o8r_A 385 SIISALEAAAQSGKKVSVFVELKARFDEENNLRLSERMRRSGIRIVYS 432 (705)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCCSCC----CHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHCCCEEEEEEeCCCCcchhhhHHHHHHHHHCCCEEEEc
Confidence 3446677788889998888864433433 567778999999988774
No 35
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=70.24 E-value=22 Score=36.16 Aligned_cols=102 Identities=18% Similarity=0.147 Sum_probs=56.8
Q ss_pred cCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch-------HHHHHhh-hcc
Q 006152 453 RDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN-------AISYIIH-EVT 524 (658)
Q Consensus 453 ~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds-------Av~~~M~-~Vd 524 (658)
....+++|-|.+.++..+++.+.+.| -+|++.+ |.+.+.. ..+...|+.+..+... -+..+-+ ++.
T Consensus 90 ~~~~v~~t~g~~~al~~~~~~l~~~g--d~vl~~~--p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~ 163 (391)
T 3h14_A 90 DPGRVVITPGSSGGFLLAFTALFDSG--DRVGIGA--PGYPSYR--QILRALGLVPVDLPTAPENRLQPVPADFAGLDLA 163 (391)
T ss_dssp CGGGEEEESSHHHHHHHHHHHHCCTT--CEEEEEE--SCCHHHH--HHHHHTTCEEEEEECCGGGTTSCCHHHHTTSCCS
T ss_pred CHHHEEEecChHHHHHHHHHHhcCCC--CEEEEcC--CCCccHH--HHHHHcCCEEEEeecCcccCCCCCHHHHHhcCCe
Confidence 34568888888788866666554334 3555543 6666544 3445678888877532 1222222 344
Q ss_pred EEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 525 RVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 525 ~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
.|++- ..--..|.++..---..++-+|++|++.+++
T Consensus 164 ~v~i~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 199 (391)
T 3h14_A 164 GLMVA-SPANPTGTMLDHAAMGALIEAAQAQGASFIS 199 (391)
T ss_dssp EEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEC-CCCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 45442 1111233333333344567788999998776
No 36
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=70.11 E-value=27 Score=31.98 Aligned_cols=84 Identities=7% Similarity=0.048 Sum_probs=49.5
Q ss_pred HHHHHhccCCCEEEeeCChHH--HHHHHHH-HHHcCCeeE----------------EEEeCCCCCchHHHHHHHHHhCCC
Q 006152 446 KHAVTKIRDGDVLLTYGSSSA--VEMILQH-AHELGKQFR----------------VVIVDSRPKHEGKLLLRRLVRKGL 506 (658)
Q Consensus 446 ~~a~~~I~dgdvILT~g~Ssa--V~~vL~~-A~e~gk~f~----------------ViV~ESRP~~EG~~La~eL~~~GI 506 (658)
+.+++.|.+...|..+|.+.. +...+.. ...-|+... +++.-|+-..+-.++++.+.+.|+
T Consensus 31 ~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vi~iS~sG~t~~~~~~~~~ak~~g~ 110 (180)
T 1jeo_A 31 DSLIDRIIKAKKIFIFGVGRSGYIGRCFAMRLMHLGFKSYFVGETTTPSYEKDDLLILISGSGRTESVLTVAKKAKNINN 110 (180)
T ss_dssp HHHHHHHHHCSSEEEECCHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEEESSSCCHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHhCCEEEEEeecHHHHHHHHHHHHHHHcCCeEEEeCCCccccCCCCCEEEEEeCCCCcHHHHHHHHHHHHCCC
Confidence 345556666778888988643 2222222 222333221 111222222344566688899999
Q ss_pred cEEEEcchHHHHHhhhccEEEEcc
Q 006152 507 SCTYTHINAISYIIHEVTRVFLGA 530 (658)
Q Consensus 507 ~vT~I~DsAv~~~M~~Vd~VlvGA 530 (658)
++..|+++.-+ +.+.+|.+|.-.
T Consensus 111 ~vi~IT~~~~s-l~~~ad~~l~~~ 133 (180)
T 1jeo_A 111 NIIAIVCECGN-VVEFADLTIPLE 133 (180)
T ss_dssp CEEEEESSCCG-GGGGCSEEEECC
T ss_pred cEEEEeCCCCh-HHHhCCEEEEeC
Confidence 99999998766 777899887643
No 37
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=69.71 E-value=34 Score=32.36 Aligned_cols=83 Identities=11% Similarity=0.084 Sum_probs=50.5
Q ss_pred HHHHHhccCCCEEEeeCChHH--HHHHH-HHHHHcCCeeE--------------EEEe--CCCCCchHHHHHHHHHhCCC
Q 006152 446 KHAVTKIRDGDVLLTYGSSSA--VEMIL-QHAHELGKQFR--------------VVIV--DSRPKHEGKLLLRRLVRKGL 506 (658)
Q Consensus 446 ~~a~~~I~dgdvILT~g~Ssa--V~~vL-~~A~e~gk~f~--------------ViV~--ESRP~~EG~~La~eL~~~GI 506 (658)
+.+++.|.+...|..+|.++. +...+ .....-|+... |+++ -|+--.+-.++++.+.+.|+
T Consensus 38 ~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~DvvI~iS~SG~t~~~i~~~~~ak~~g~ 117 (200)
T 1vim_A 38 GEMIKLIDSARSIFVIGAGRSGYIAKAFAMRLMHLGYTVYVVGETVTPRITDQDVLVGISGSGETTSVVNISKKAKDIGS 117 (200)
T ss_dssp HHHHHHHHHSSCEEEECSHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEECSSSCCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhcCCEEEEEEecHHHHHHHHHHHHHHhcCCeEEEeCCccccCCCCCCEEEEEeCCCCcHHHHHHHHHHHHCCC
Confidence 344556666678888887643 22222 22223343221 1111 12222344566788899999
Q ss_pred cEEEEcchHHHHHhhhccEEEE
Q 006152 507 SCTYTHINAISYIIHEVTRVFL 528 (658)
Q Consensus 507 ~vT~I~DsAv~~~M~~Vd~Vlv 528 (658)
++..|+++.-+.+.+.+|.+|.
T Consensus 118 ~vI~IT~~~~s~La~~ad~~l~ 139 (200)
T 1vim_A 118 KLVAVTGKRDSSLAKMADVVMV 139 (200)
T ss_dssp EEEEEESCTTSHHHHHCSEEEE
T ss_pred eEEEEECCCCChHHHhCCEEEE
Confidence 9999999887888888999886
No 38
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=68.54 E-value=57 Score=29.14 Aligned_cols=104 Identities=14% Similarity=0.190 Sum_probs=54.8
Q ss_pred CEEEeeCC-hHH----HHHHHHHHHHcCCeeEEE-EeCCCCC------chHHHH----HHHHHhCCCcEEE---Ecc-hH
Q 006152 456 DVLLTYGS-SSA----VEMILQHAHELGKQFRVV-IVDSRPK------HEGKLL----LRRLVRKGLSCTY---THI-NA 515 (658)
Q Consensus 456 dvILT~g~-Ssa----V~~vL~~A~e~gk~f~Vi-V~ESRP~------~EG~~L----a~eL~~~GI~vT~---I~D-sA 515 (658)
.+++-+.. |.. ++..+..|...+..+.++ |.+..+. .++.+. ...|.+.|+++.. +.. ..
T Consensus 26 ~ILv~vD~~s~~s~~al~~A~~la~~~~a~l~llhV~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~v~~G~~ 105 (155)
T 3dlo_A 26 PIVVAVDKKSDRAERVLRFAAEEARLRGVPVYVVHSLPGGGRTKDEDIIEAKETLSWAVSIIRKEGAEGEEHLLVRGKEP 105 (155)
T ss_dssp CEEEECCSSSHHHHHHHHHHHHHHHHHTCCEEEEEEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEESSSCH
T ss_pred eEEEEECCCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCCCcccHHHHHHHHHHHHHHHHHHHhcCCCceEEEEecCCCH
Confidence 34455566 543 434344444446566554 4443221 122222 2445678998764 322 22
Q ss_pred HHHHh---h--hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEee
Q 006152 516 ISYII---H--EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVC 562 (658)
Q Consensus 516 v~~~M---~--~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~ 562 (658)
.-.++ . ++|.|++|+..--.-+.. -.|+..-. +.++-.+||+|+
T Consensus 106 ~~~I~~~a~~~~~DLIV~G~~g~~~~~~~--~lGSv~~~-vl~~a~~PVLvV 154 (155)
T 3dlo_A 106 PDDIVDFADEVDAIAIVIGIRKRSPTGKL--IFGSVARD-VILKANKPVICI 154 (155)
T ss_dssp HHHHHHHHHHTTCSEEEEECCEECTTSCE--ECCHHHHH-HHHHCSSCEEEE
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCCE--EeccHHHH-HHHhCCCCEEEe
Confidence 23333 3 699999999875222221 24654443 456778999986
No 39
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=68.49 E-value=18 Score=31.72 Aligned_cols=91 Identities=13% Similarity=0.081 Sum_probs=53.0
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHh-----hhccEEEEc
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYII-----HEVTRVFLG 529 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M-----~~Vd~VlvG 529 (658)
+..|+..|++..=..+.+.+.++| ++|+++|..|. -+.++.+.|+.+.+. |..-...+ .++|.||+.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g--~~V~~id~~~~-----~~~~~~~~~~~~~~g-d~~~~~~l~~~~~~~~d~vi~~ 77 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAG--KKVLAVDKSKE-----KIELLEDEGFDAVIA-DPTDESFYRSLDLEGVSAVLIT 77 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--CCEEEEESCHH-----HHHHHHHTTCEEEEC-CTTCHHHHHHSCCTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CeEEEEECCHH-----HHHHHHHCCCcEEEC-CCCCHHHHHhCCcccCCEEEEe
Confidence 457888898875444455555555 46777776542 345666778765443 33322333 356777664
Q ss_pred ceeEecCCCeecccchHHHHHHHhhCCCCeEee
Q 006152 530 ASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVC 562 (658)
Q Consensus 530 AdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~ 562 (658)
.. +.-....++..|++.+++.+++
T Consensus 78 ~~---------~~~~n~~~~~~a~~~~~~~iia 101 (141)
T 3llv_A 78 GS---------DDEFNLKILKALRSVSDVYAIV 101 (141)
T ss_dssp CS---------CHHHHHHHHHHHHHHCCCCEEE
T ss_pred cC---------CHHHHHHHHHHHHHhCCceEEE
Confidence 43 2234466788888877554443
No 40
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=68.14 E-value=11 Score=35.37 Aligned_cols=100 Identities=8% Similarity=0.044 Sum_probs=56.6
Q ss_pred EEEeeCChHHHHHHHH-HHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEc--c--hHHHHHhhhccEEEEcce
Q 006152 457 VLLTYGSSSAVEMILQ-HAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTH--I--NAISYIIHEVTRVFLGAS 531 (658)
Q Consensus 457 vILT~g~SsaV~~vL~-~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~--D--sAv~~~M~~Vd~VlvGAd 531 (658)
+||..|-+.-+...|. .+.++| .+|+++.-++...- .+ .++.+.... | ..+..++.++|.||--|-
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~-----~~--~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag 72 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTD--YQIYAGARKVEQVP-----QY--NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSG 72 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSS--CEEEEEESSGGGSC-----CC--TTEEEEECCTTSCHHHHHTTTTTCSEEEECCC
T ss_pred eEEEECCCCHHHHHHHHHHHHCC--CEEEEEECCccchh-----hc--CCceEEEecccCCHHHHHHHHcCCCEEEECCc
Confidence 5777776655554443 344444 67777654432100 01 233332221 2 244555667777776554
Q ss_pred eEecCCCeecccchHHHHHHHhhCCCCeEeeccc
Q 006152 532 SVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEA 565 (658)
Q Consensus 532 aV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~aet 565 (658)
....+---+|-.|+..+.-+|+..+++-+|...+
T Consensus 73 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 73 SGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp CTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 3333333458899999999999999876665444
No 41
>3rrl_B Succinyl-COA:3-ketoacid-coenzyme A transferase SU; MCSG,PSI-biology, structural genomics, midwest center for ST genomics; 2.29A {Helicobacter pylori} PDB: 3cdk_B
Probab=66.98 E-value=6 Score=39.00 Aligned_cols=95 Identities=18% Similarity=0.218 Sum_probs=55.9
Q ss_pred HHHHHHHHHHhccCCCEEEe-eCChHHHHHHHHHHHHcCCeeEEEEeCCC-----CCchHHHHHHHHHhCCC------cE
Q 006152 441 DRVIVKHAVTKIRDGDVLLT-YGSSSAVEMILQHAHELGKQFRVVIVDSR-----PKHEGKLLLRRLVRKGL------SC 508 (658)
Q Consensus 441 ~~~Ia~~a~~~I~dgdvILT-~g~SsaV~~vL~~A~e~gk~f~ViV~ESR-----P~~EG~~La~eL~~~GI------~v 508 (658)
++.|+..++..|+||++|-. +|-.+.|..++. ++.+. +..|+- |.-.+...-..|...|- +.
T Consensus 2 r~~Ia~raA~el~dG~~vnlGIGiP~~va~~~~-----~~~v~-l~~E~G~~g~~p~p~~~~~d~~~in~G~~~~t~~~~ 75 (207)
T 3rrl_B 2 REAIIKRAAKELKEGMYVNLGIGLPTLVANEVS-----GMNIV-FQSENGLLGIGAYPLEGSVDADLINAGKETITVVPG 75 (207)
T ss_dssp HHHHHHHHHTTCCTTCEEEECTTGGGGGGGGGS-----SSCCE-EEETTTEEEECCCCCTTCCCTTCBCTTSBBCCEEEE
T ss_pred hHHHHHHHHHhCCCCCEEEECCChHHHHHHhcc-----CCcEE-EEeccceecCcCCCCccccCHhHeecCCceeeecCC
Confidence 35789999999999986543 343444544333 44433 334543 33211111133444442 23
Q ss_pred EEEcchHHHHH-hh--hccEEEEcceeEecCCCeec
Q 006152 509 TYTHINAISYI-IH--EVTRVFLGASSVLSNGTVCS 541 (658)
Q Consensus 509 T~I~DsAv~~~-M~--~Vd~VlvGAdaV~aNG~VvN 541 (658)
.-+.|++-.+- ++ ++|..|+||--|-.+|.+.|
T Consensus 76 ~~~~~~~~~F~~~~gG~~Dvailga~qVD~~Gnvn~ 111 (207)
T 3rrl_B 76 ASFFNSADSFAMIRGGHIDLAILGGMEVSQNGDLAN 111 (207)
T ss_dssp EEECCHHHHHHHHHTTCCSEEEECCSEEETTSCEEC
T ss_pred ceeeCCHHHHHHHhCCCeeEEEECHHHHCcCCCccc
Confidence 33556554444 44 79999999999999999875
No 42
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=66.41 E-value=30 Score=35.31 Aligned_cols=100 Identities=15% Similarity=0.219 Sum_probs=52.4
Q ss_pred CCEEEeeCChHHHHHHHHHHH------HcCCeeEEEEeCCCCCchHHHHH-HHHHhC---CCcEEEEc-chHHHHHhh-h
Q 006152 455 GDVLLTYGSSSAVEMILQHAH------ELGKQFRVVIVDSRPKHEGKLLL-RRLVRK---GLSCTYTH-INAISYIIH-E 522 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~------e~gk~f~ViV~ESRP~~EG~~La-~eL~~~---GI~vT~I~-DsAv~~~M~-~ 522 (658)
..+++|-|.+.++..+|..+. +.|. +|++++ .+.+.+...+ ..+.+. |+.+.++. ...+-..+. +
T Consensus 89 ~~v~~~~g~t~al~~al~~~~~~~~~~~~gd--~vii~~-~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~l~~~i~~~ 165 (416)
T 1qz9_A 89 GEVVVTDTTSINLFKVLSAALRVQATRSPER--RVIVTE-TSNFPTDLYIAEGLADMLQQGYTLRLVDSPEELPQAIDQD 165 (416)
T ss_dssp TSEEECSCHHHHHHHHHHHHHHHHHHHSTTC--CEEEEE-TTSCHHHHHHHHHHHHHHCSSCEEEEESSGGGHHHHCSTT
T ss_pred ccEEEeCChhHHHHHHHHhhcccccccCCCC--cEEEEc-CCCCCchHHHHHHHHHHhcCCceEEEeCcHHHHHHHhCCC
Confidence 467777666666655565543 3343 344443 3444433222 233333 88888886 334434443 3
Q ss_pred ccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 523 VTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 523 Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
+..|++ ...-...|.+.. --.|+-+|++||+.+++
T Consensus 166 ~~~v~~-~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 200 (416)
T 1qz9_A 166 TAVVML-THVNYKTGYMHD---MQALTALSHECGALAIW 200 (416)
T ss_dssp EEEEEE-ESBCTTTCBBCC---HHHHHHHHHHHTCEEEE
T ss_pred ceEEEE-eccccCcccccC---HHHHHHHHHHcCCEEEE
Confidence 333333 222222355444 35677789999987776
No 43
>3d3u_A 4-hydroxybutyrate COA-transferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.80A {Porphyromonas gingivalis}
Probab=66.30 E-value=36 Score=36.86 Aligned_cols=85 Identities=14% Similarity=0.023 Sum_probs=44.9
Q ss_pred cEEEEcceeEecCCCeecc-cchHH---------HHHHHhh-CCCCeEeecccc-cccccccCCcccccccCCccccccc
Q 006152 524 TRVFLGASSVLSNGTVCSR-VGTAC---------VAMVAYG-FHIPVLVCCEAY-KFHERVQLDSICSNELGDPDSISKV 591 (658)
Q Consensus 524 d~VlvGAdaV~aNG~VvNK-iGT~~---------lAl~Ak~-~~VPVyV~aety-Kf~~~~~~ds~~~nElrdp~Ev~~~ 591 (658)
|..|+||=-|-.+|.+.+- +|+-. ++.-|+. .+=.+++|+++. |.- .. + .+..
T Consensus 307 dv~i~ga~evD~~G~vn~~~~g~~~~~G~GG~~D~~~~A~~s~~gk~ii~~~~t~k~G------~~-------s-~iv~- 371 (439)
T 3d3u_A 307 MVSINSCLEMDLMGQAASESIGYEQFSGSGGQVDFLRGAKRSKGGISIMAFPSTAKKG------TE-------S-RIVP- 371 (439)
T ss_dssp EEEEECCSCEETTSCC--------------CHHHHHHHHTTSTTCEEEEECCSEETTT------TE-------E-SEES-
T ss_pred cEEEehheEecCCCCEeeeccCCeeecccccHHHHhhcccccCCCeEEEEEeeecCCC------CC-------C-eEeE-
Confidence 8999999999999998754 44432 2444442 333567777754 111 00 0 0000
Q ss_pred CCccccccCCCccCCCCceeccceeeecCCCCccEEEeCCCCcCCCcchH
Q 006152 592 PGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMVSHTLVSV 641 (658)
Q Consensus 592 ~g~~~~~~l~~~~~~~~l~v~Np~FDvTPpeLIT~IITE~Gii~PssVpv 641 (658)
.+ ..-.+=.||-..++.||||+|++......+
T Consensus 372 ----------------~~--~~g~~v~~~~~~v~~vVTE~gva~l~g~~l 403 (439)
T 3d3u_A 372 ----------------IL--KEGACVTTGRNEVDYVVTEYGVARLRGATL 403 (439)
T ss_dssp ----------------SC--C------CCSTTCSEEEETTEEEECTTCCH
T ss_pred ----------------Cc--cCCCCceeCCCcceEEECCCEEEEeCCCCH
Confidence 00 000123456689999999999998776544
No 44
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=66.24 E-value=1e+02 Score=31.07 Aligned_cols=101 Identities=14% Similarity=0.167 Sum_probs=54.9
Q ss_pred CCEEEeeCChHHHHHHHHHHHH--cCCeeEEEEeCCCCCchHHHHH--HHHHhCCCcEEEEcc--------hHHHHHhh-
Q 006152 455 GDVLLTYGSSSAVEMILQHAHE--LGKQFRVVIVDSRPKHEGKLLL--RRLVRKGLSCTYTHI--------NAISYIIH- 521 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e--~gk~f~ViV~ESRP~~EG~~La--~eL~~~GI~vT~I~D--------sAv~~~M~- 521 (658)
..+++|.|.+.++..++..+.+ .+..-+|++. .|.+.|.... ..+...|+.+..+.. ..+-..+.
T Consensus 91 ~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~--~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~ 168 (420)
T 1t3i_A 91 REIVYTRNATEAINLVAYSWGMNNLKAGDEIITT--VMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSE 168 (420)
T ss_dssp GGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEE--TTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCT
T ss_pred CeEEEcCChHHHHHHHHHHhhhcccCCCCEEEEC--cchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhCC
Confidence 4678888777788766665511 1233456664 3556554322 223356888877753 12222232
Q ss_pred hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 522 EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 522 ~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
++..|++ ..--...|.+.. --.|+-+|++|++.+++
T Consensus 169 ~~~~v~~-~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 204 (420)
T 1t3i_A 169 KTKLVTV-VHISNTLGCVNP---AEEIAQLAHQAGAKVLV 204 (420)
T ss_dssp TEEEEEE-ESBCTTTCBBCC---HHHHHHHHHHTTCEEEE
T ss_pred CceEEEE-eCCcccccCcCC---HHHHHHHHHHcCCEEEE
Confidence 3333333 222222355544 35677889999987776
No 45
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=65.33 E-value=1.2e+02 Score=30.45 Aligned_cols=101 Identities=12% Similarity=0.182 Sum_probs=55.0
Q ss_pred CCEEEeeCChHHHHHHHHHHHH--cCCeeEEEEeCCCCCchHHHH-HHH-HHhCCCcEEEEcc--------hHHHHHhh-
Q 006152 455 GDVLLTYGSSSAVEMILQHAHE--LGKQFRVVIVDSRPKHEGKLL-LRR-LVRKGLSCTYTHI--------NAISYIIH- 521 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e--~gk~f~ViV~ESRP~~EG~~L-a~e-L~~~GI~vT~I~D--------sAv~~~M~- 521 (658)
..+++|.|.+.++..++..+.+ .+..-+|++.+ |.+.|... ... +...|+.+..+.. ..+-..+.
T Consensus 86 ~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~ 163 (406)
T 1kmj_A 86 EELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQ--MEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDE 163 (406)
T ss_dssp GGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEET--TCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCT
T ss_pred CeEEEeCChhHHHHHHHHHhhhhcCCCCCEEEEec--ccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhcc
Confidence 4678888877888766665521 22334666654 55544322 222 3346888877753 23333333
Q ss_pred hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 522 EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 522 ~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
++..|++ ..--...|.+.. --.|+-+|++|++.+++
T Consensus 164 ~~~~v~~-~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 199 (406)
T 1kmj_A 164 KTRLLAI-THVSNVLGTENP---LAEMITLAHQHGAKVLV 199 (406)
T ss_dssp TEEEEEE-ESBCTTTCCBCC---HHHHHHHHHHTTCEEEE
T ss_pred CCeEEEE-eCCCccccCcCC---HHHHHHHHHHcCCEEEE
Confidence 3333433 221222355554 35677789999987765
No 46
>3rrl_A Succinyl-COA:3-ketoacid-coenzyme A transferase SU; MCSG,PSI-biology, structural genomics, midwest center for ST genomics; 2.29A {Helicobacter pylori}
Probab=64.38 E-value=19 Score=36.03 Aligned_cols=22 Identities=14% Similarity=-0.022 Sum_probs=19.2
Q ss_pred hccEEEEcceeEecCCCeeccc
Q 006152 522 EVTRVFLGASSVLSNGTVCSRV 543 (658)
Q Consensus 522 ~Vd~VlvGAdaV~aNG~VvNKi 543 (658)
++|..|+.|...-.+|.+.-.-
T Consensus 151 ~~DvAli~a~~aD~~GN~~~~~ 172 (235)
T 3rrl_A 151 TGDYGLIKAYKSDTLGNLVFRK 172 (235)
T ss_dssp CEEEEEEECSEEETTCCEECCG
T ss_pred CCeEEEEEeeecCCCceEEEec
Confidence 5799999999999999987654
No 47
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=63.96 E-value=69 Score=27.39 Aligned_cols=55 Identities=16% Similarity=0.242 Sum_probs=32.0
Q ss_pred CCC-cEEE--EcchHHHHHh---h--hccEEEEcceeEecCCCeec-ccchHHHHHHHhhCCCCeEee
Q 006152 504 KGL-SCTY--THINAISYII---H--EVTRVFLGASSVLSNGTVCS-RVGTACVAMVAYGFHIPVLVC 562 (658)
Q Consensus 504 ~GI-~vT~--I~DsAv~~~M---~--~Vd~VlvGAdaV~aNG~VvN-KiGT~~lAl~Ak~~~VPVyV~ 562 (658)
.|+ +++. ...+....++ + ++|.|++|++.- |.+-. -.|+..-.+ .++.++||+|+
T Consensus 73 ~g~~~~~~~~~~g~~~~~I~~~a~~~~~dliV~G~~~~---~~~~~~~~Gs~~~~v-l~~~~~pVlvv 136 (137)
T 2z08_A 73 TGVPKEDALLLEGVPAEAILQAARAEKADLIVMGTRGL---GALGSLFLGSQSQRV-VAEAPCPVLLV 136 (137)
T ss_dssp HCCCGGGEEEEESSHHHHHHHHHHHTTCSEEEEESSCT---TCCSCSSSCHHHHHH-HHHCSSCEEEE
T ss_pred cCCCccEEEEEecCHHHHHHHHHHHcCCCEEEECCCCC---chhhhhhhccHHHHH-HhcCCCCEEEe
Confidence 688 5433 3333333333 3 799999999752 22221 256554444 45578999986
No 48
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=63.85 E-value=59 Score=32.45 Aligned_cols=98 Identities=16% Similarity=0.144 Sum_probs=57.3
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc--------hHHHHHhh---hcc
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI--------NAISYIIH---EVT 524 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D--------sAv~~~M~---~Vd 524 (658)
.+++|.|.+.++..++..+.+.| -+|++. .|.+.|..+...+...|+.+..+.. ..+-..++ ++.
T Consensus 73 ~v~~~~g~t~a~~~~~~~l~~~g--d~vl~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~ 148 (386)
T 2dr1_A 73 VLLVPSSGTGIMEASIRNGVSKG--GKVLVT--IIGAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVE 148 (386)
T ss_dssp EEEESSCHHHHHHHHHHHHSCTT--CEEEEE--ESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCTTCC
T ss_pred EEEEeCChHHHHHHHHHHhhcCC--CeEEEE--cCCchhHHHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCCCCc
Confidence 36677777777766666554333 356665 3566664444556667888777652 23333442 455
Q ss_pred EEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 525 RVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 525 ~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
.|++- .--...|.+.. --.|+-+|++|++.+++
T Consensus 149 ~v~~~-~~~nptG~~~~---l~~i~~l~~~~~~~li~ 181 (386)
T 2dr1_A 149 AVTIT-YNETSTGVLNP---LPELAKVAKEHDKLVFV 181 (386)
T ss_dssp EEEEE-SEETTTTEECC---HHHHHHHHHHTTCEEEE
T ss_pred EEEEE-eecCCcchhCC---HHHHHHHHHHcCCeEEE
Confidence 55543 22233455433 36677789999987776
No 49
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=63.76 E-value=16 Score=31.46 Aligned_cols=60 Identities=13% Similarity=0.151 Sum_probs=34.1
Q ss_pred HHHHhCCCcEEEEc--chHHHHH---hhhccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEee
Q 006152 499 RRLVRKGLSCTYTH--INAISYI---IHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVC 562 (658)
Q Consensus 499 ~eL~~~GI~vT~I~--DsAv~~~---M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~ 562 (658)
..|.+.|++++... ......+ .+++|+|++|+..- |.+-...|+..-. +.++..+||+|+
T Consensus 73 ~~~~~~g~~~~~~v~~g~~~~~I~~~a~~~dliV~G~~~~---~~~~~~~Gs~~~~-vl~~~~~pVlvv 137 (138)
T 3idf_A 73 TFFTEKGINPFVVIKEGEPVEMVLEEAKDYNLLIIGSSEN---SFLNKIFASHQDD-FIQKAPIPVLIV 137 (138)
T ss_dssp HHHHTTTCCCEEEEEESCHHHHHHHHHTTCSEEEEECCTT---STTSSCCCCTTCH-HHHHCSSCEEEE
T ss_pred HHHHHCCCCeEEEEecCChHHHHHHHHhcCCEEEEeCCCc---chHHHHhCcHHHH-HHhcCCCCEEEe
Confidence 34556788875432 2222222 23899999998742 2222222554333 455667999986
No 50
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=63.61 E-value=24 Score=35.39 Aligned_cols=101 Identities=11% Similarity=0.108 Sum_probs=56.6
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc-----------hHHHHHhh-
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI-----------NAISYIIH- 521 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D-----------sAv~~~M~- 521 (658)
...+++|.|.+.++..++..+.+.| -+|++.+ |.+.+.. ..+...|..+..+.. ..+-..+.
T Consensus 82 ~~~v~~~~g~~~a~~~~~~~l~~~g--d~vl~~~--~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 155 (383)
T 3kax_A 82 KEWIVFSAGIVPALSTSIQAFTKEN--ESVLVQP--PIYPPFF--EMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQ 155 (383)
T ss_dssp GGGEEEESCHHHHHHHHHHHHCCTT--CEEEECS--SCCHHHH--HHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTT
T ss_pred hhhEEEcCCHHHHHHHHHHHhCCCC--CEEEEcC--CCcHHHH--HHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCc
Confidence 3467888887778866666654334 3555543 6666644 334556777665541 23333333
Q ss_pred hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 522 EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 522 ~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
++..|++ ..--...|.++..---..++-+|++|++.+++
T Consensus 156 ~~~~v~i-~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 194 (383)
T 3kax_A 156 GVKLMLL-CSPHNPIGRVWKKEELTKLGSLCTKYNVIVVA 194 (383)
T ss_dssp TCCEEEE-ESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCeEEEE-eCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEE
Confidence 5666665 33222234444333333455568999998876
No 51
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=63.51 E-value=32 Score=34.62 Aligned_cols=101 Identities=9% Similarity=0.115 Sum_probs=56.9
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc-----------hHHHHHhh-
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI-----------NAISYIIH- 521 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D-----------sAv~~~M~- 521 (658)
...+++|-|.+.++..++..+.+.| -+|++. .|.+.+.. ..+...|..+..+.. ..+-..+.
T Consensus 85 ~~~i~~~~g~~~a~~~~~~~l~~~g--d~vl~~--~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 158 (391)
T 3dzz_A 85 EDWCVFASGVVPAISAMVRQFTSPG--DQILVQ--EPVYNMFY--SVIEGNGRRVISSDLIYENSKYSVNWADLEEKLAT 158 (391)
T ss_dssp GGGEEEESCHHHHHHHHHHHHSCTT--CEEEEC--SSCCHHHH--HHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTS
T ss_pred HHHEEECCCHHHHHHHHHHHhCCCC--CeEEEC--CCCcHHHH--HHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhc
Confidence 3467788777778866666654333 345543 36666533 334456777666532 23344443
Q ss_pred -hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 522 -EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 522 -~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
++..|++ ..--...|.+++.----.|+-+|++|++.+++
T Consensus 159 ~~~~~v~i-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 198 (391)
T 3dzz_A 159 PSVRMMVF-CNPHNPIGYAWSEEEVKRIAELCAKHQVLLIS 198 (391)
T ss_dssp TTEEEEEE-ESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCceEEEE-ECCCCCCCcccCHHHHHHHHHHHHHCCCEEEE
Confidence 4445544 22223344454444445566789999998876
No 52
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=63.48 E-value=45 Score=30.64 Aligned_cols=36 Identities=11% Similarity=-0.157 Sum_probs=29.5
Q ss_pred hHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEE
Q 006152 493 EGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFL 528 (658)
Q Consensus 493 EG~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~Vlv 528 (658)
+-.++++.+.+.|+++..|+++.-+.+-+.+|.+|.
T Consensus 94 ~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~ 129 (186)
T 1m3s_A 94 SLIHTAAKAKSLHGIVAALTINPESSIGKQADLIIR 129 (186)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCTTSHHHHHCSEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCCchHHhCCEEEE
Confidence 445567888999999999999877777788998875
No 53
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=63.15 E-value=24 Score=32.39 Aligned_cols=86 Identities=13% Similarity=0.055 Sum_probs=49.0
Q ss_pred CCEEEeeCChHHHHHHHHHHHHc-CCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHH---HHH--hhhccEEEE
Q 006152 455 GDVLLTYGSSSAVEMILQHAHEL-GKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAI---SYI--IHEVTRVFL 528 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~-gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv---~~~--M~~Vd~Vlv 528 (658)
++.|+.+|++..=..+.+.+.+. |. +|+++|..|. -+..|.+.|+.+.+...... ..+ +.++|.||+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~--~V~vid~~~~-----~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~ 111 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGK--ISLGIEIREE-----AAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLL 111 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCS--CEEEEESCHH-----HHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCC--eEEEEECCHH-----HHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEE
Confidence 56788889987654556666665 64 6777776542 24556778887654321111 111 345566665
Q ss_pred cceeEecCCCeecccchHHHHHHHhhCC
Q 006152 529 GASSVLSNGTVCSRVGTACVAMVAYGFH 556 (658)
Q Consensus 529 GAdaV~aNG~VvNKiGT~~lAl~Ak~~~ 556 (658)
-.. +......++..++..+
T Consensus 112 ~~~---------~~~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 112 AMP---------HHQGNQTALEQLQRRN 130 (183)
T ss_dssp CCS---------SHHHHHHHHHHHHHTT
T ss_pred eCC---------ChHHHHHHHHHHHHHC
Confidence 332 1223345566777776
No 54
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=61.96 E-value=60 Score=29.79 Aligned_cols=37 Identities=11% Similarity=0.084 Sum_probs=30.5
Q ss_pred hHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEc
Q 006152 493 EGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLG 529 (658)
Q Consensus 493 EG~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~VlvG 529 (658)
+-.++++.+.+.|+++..|+++.-+.+-+.+|.+|.-
T Consensus 102 ~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~ 138 (187)
T 3sho_A 102 DTVAALAGAAERGVPTMALTDSSVSPPARIADHVLVA 138 (187)
T ss_dssp HHHHHHHHHHHTTCCEEEEESCTTSHHHHHCSEEEEC
T ss_pred HHHHHHHHHHHCCCCEEEEeCCCCCcchhhCcEEEEe
Confidence 4456668888999999999998878888889998874
No 55
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=61.70 E-value=47 Score=33.30 Aligned_cols=104 Identities=12% Similarity=-0.010 Sum_probs=60.6
Q ss_pred cCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchH-------H-HHHhhhcc
Q 006152 453 RDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINA-------I-SYIIHEVT 524 (658)
Q Consensus 453 ~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsA-------v-~~~M~~Vd 524 (658)
....+++|-|.+.++..+++.+.+.+..-+|++. .|.+.+... .+...|+.+..+.... + ..+-+++.
T Consensus 81 ~~~~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~--~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~ 156 (376)
T 3ezs_A 81 KENELISTLGSREVLFNFPSFVLFDYQNPTIAYP--NPFYQIYEG--AAKFIKAKSLLMPLTKENDFTPSLNEKELQEVD 156 (376)
T ss_dssp CGGGEEEESSSHHHHHHHHHHHTTTCSSCEEEEE--ESCCTHHHH--HHHHTTCEEEEEECCGGGTSCCCCCHHHHHHCS
T ss_pred CHHHEEECcCcHHHHHHHHHHHcCCCCCCEEEEe--cCCcHhHHH--HHHHcCCEEEEcccCCCCCcchhHHhhhccCCC
Confidence 3457889999888887777666544113356654 456655433 3556788887775321 1 12224677
Q ss_pred EEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 525 RVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 525 ~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
.|++- .--...|.++..---..++-+|++|++.+++
T Consensus 157 ~v~~~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 192 (376)
T 3ezs_A 157 LVILN-SPNNPTGRTLSLEELISWVKLALKHDFILIN 192 (376)
T ss_dssp EEEEC-SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEEc-CCCCCcCCCCCHHHHHHHHHHHHHcCcEEEE
Confidence 77663 2222334444433344566678999987775
No 56
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=61.43 E-value=88 Score=31.84 Aligned_cols=102 Identities=18% Similarity=0.208 Sum_probs=57.4
Q ss_pred CCEEEeeCChHHHHHHHHHHHH--cCCeeEEEEeCCCCCchHHHHH-HHHHhCCCcEEEEcch--------HHHHHhhhc
Q 006152 455 GDVLLTYGSSSAVEMILQHAHE--LGKQFRVVIVDSRPKHEGKLLL-RRLVRKGLSCTYTHIN--------AISYIIHEV 523 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e--~gk~f~ViV~ESRP~~EG~~La-~eL~~~GI~vT~I~Ds--------Av~~~M~~V 523 (658)
..+++|.|.+.++..+|+.+.+ .+..-+|++. .|.+.+...+ ..+...|+.+.++... .+-..+.+=
T Consensus 86 ~~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~--~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~ 163 (423)
T 3lvm_A 86 REIVFTSGATESDNLAIKGAANFYQKKGKHIITS--KTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDD 163 (423)
T ss_dssp GGEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEE--TTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCTT
T ss_pred CeEEEeCChHHHHHHHHHHHHHhhccCCCEEEEC--CccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcCCC
Confidence 3678888888877666665543 1233456654 3555554433 4556789988888632 222233221
Q ss_pred cEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 524 TRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 524 d~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
.++|+-..--...|.+.. --.|+-+|+.|++.+++
T Consensus 164 ~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 198 (423)
T 3lvm_A 164 TILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHV 198 (423)
T ss_dssp EEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEE
T ss_pred cEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEE
Confidence 233332222223355544 34577789999987776
No 57
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=61.06 E-value=15 Score=39.39 Aligned_cols=94 Identities=10% Similarity=0.115 Sum_probs=60.1
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHh-----hhccEEEE
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYII-----HEVTRVFL 528 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M-----~~Vd~Vlv 528 (658)
.++.|+..|++..=..+.+.+.+.| +.|+|+|..|. .+.+|.+.|+++.+- |..=-.++ .+++.||+
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g--~~vvvId~d~~-----~v~~~~~~g~~vi~G-Dat~~~~L~~agi~~A~~viv 74 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSG--VKMVVLDHDPD-----HIETLRKFGMKVFYG-DATRMDLLESAGAAKAEVLIN 74 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTT--CCEEEEECCHH-----HHHHHHHTTCCCEES-CTTCHHHHHHTTTTTCSEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC--CCEEEEECCHH-----HHHHHHhCCCeEEEc-CCCCHHHHHhcCCCccCEEEE
Confidence 3467889999876555556666555 56777787654 356777889987554 43333333 36788877
Q ss_pred cceeEecCCCeecccchHHHHHHHhhCCCC--eEeecc
Q 006152 529 GASSVLSNGTVCSRVGTACVAMVAYGFHIP--VLVCCE 564 (658)
Q Consensus 529 GAdaV~aNG~VvNKiGT~~lAl~Ak~~~VP--VyV~ae 564 (658)
..+ +..-+..+++.||.++.. +++-+.
T Consensus 75 ~~~---------~~~~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 75 AID---------DPQTNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp CCS---------SHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred CCC---------ChHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 654 245567788899988754 444443
No 58
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=60.86 E-value=1.2e+02 Score=30.01 Aligned_cols=101 Identities=16% Similarity=0.250 Sum_probs=56.3
Q ss_pred CCEEEeeCChHHHHHHHHHHHH--cCCeeEEEEeCCCCCchHHHH-HHHHHhCCCcEEEEcc--------hHHHHHhh-h
Q 006152 455 GDVLLTYGSSSAVEMILQHAHE--LGKQFRVVIVDSRPKHEGKLL-LRRLVRKGLSCTYTHI--------NAISYIIH-E 522 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e--~gk~f~ViV~ESRP~~EG~~L-a~eL~~~GI~vT~I~D--------sAv~~~M~-~ 522 (658)
..+++|-|.+.++..++..+.. .+..-+|++. .|.+.+... +..+...|+.+..+.. ..+-..+. +
T Consensus 62 ~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~--~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~ 139 (384)
T 1eg5_A 62 SEIFFTSCATESINWILKTVAETFEKRKRTIITT--PIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDED 139 (384)
T ss_dssp GGEEEESCHHHHHHHHHHHHHHHTTTTCCEEEEC--TTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCTT
T ss_pred CeEEEECCHHHHHHHHHHhhhhhccCCCCEEEEC--CCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCCC
Confidence 4678887777778766666542 0222355553 456666533 3556678988877753 12222222 3
Q ss_pred ccEEEEcceeEecCCCeecccchHHHHHHHhhCC--CCeEe
Q 006152 523 VTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFH--IPVLV 561 (658)
Q Consensus 523 Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~--VPVyV 561 (658)
+..|++ ..--...|.++. --.|+-+|++|+ +.+++
T Consensus 140 ~~~v~~-~~~~nptG~~~~---~~~i~~l~~~~~~~~~li~ 176 (384)
T 1eg5_A 140 TFLVSI-MAANNEVGTIQP---VEDVTRIVKKKNKETLVHV 176 (384)
T ss_dssp EEEEEE-ESBCTTTCBBCC---HHHHHHHHHHHCTTCEEEE
T ss_pred CeEEEE-ECCCCCcccccC---HHHHHHHHHhcCCceEEEE
Confidence 344443 222223365555 256777889998 76554
No 59
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=60.61 E-value=23 Score=32.01 Aligned_cols=64 Identities=16% Similarity=0.127 Sum_probs=34.9
Q ss_pred HHhCCCcEEEEc--chHHHHHhh-----hccEEEEcceeEecCCCeec-ccchHHHHHHHhhCCCCeEeecccccc
Q 006152 501 LVRKGLSCTYTH--INAISYIIH-----EVTRVFLGASSVLSNGTVCS-RVGTACVAMVAYGFHIPVLVCCEAYKF 568 (658)
Q Consensus 501 L~~~GI~vT~I~--DsAv~~~M~-----~Vd~VlvGAdaV~aNG~VvN-KiGT~~lAl~Ak~~~VPVyV~aetyKf 568 (658)
|...|++++... ......++. ++|+||+|++.- |.+-. -.|+..-.+ .++.++||+|+-+..+-
T Consensus 96 ~~~~g~~~~~~v~~G~~~~~I~~~a~~~~~DLIVmG~~g~---~~~~~~~~Gsva~~v-l~~a~~pVlvv~~~~~~ 167 (175)
T 2gm3_A 96 CHEIGVGCEAWIKTGDPKDVICQEVKRVRPDFLVVGSRGL---GRFQKVFVGTVSAFC-VKHAECPVMTIKRNADE 167 (175)
T ss_dssp HHHHTCEEEEEEEESCHHHHHHHHHHHHCCSEEEEEECCC---C--------CHHHHH-HHHCSSCEEEEECCGGG
T ss_pred HHHCCCceEEEEecCCHHHHHHHHHHHhCCCEEEEeCCCC---ChhhhhhcCchHHHH-HhCCCCCEEEEcCCcCC
Confidence 455788775432 222333332 599999999753 22211 256554444 45567999999665433
No 60
>2w48_A Sorbitol operon regulator; SORC, activator, repressor, DNA-binding, transcription, transcription regulator, transcription regulation; 3.20A {Klebsiella pneumoniae}
Probab=60.40 E-value=13 Score=38.18 Aligned_cols=89 Identities=13% Similarity=0.206 Sum_probs=54.5
Q ss_pred HHHHHHHHHh----ccCCCEEEeeCChHHHHHHHHHHHHc--CCeeEEEEeCC------CCCchHHHHHHHHHhC-CCcE
Q 006152 442 RVIVKHAVTK----IRDGDVLLTYGSSSAVEMILQHAHEL--GKQFRVVIVDS------RPKHEGKLLLRRLVRK-GLSC 508 (658)
Q Consensus 442 ~~Ia~~a~~~----I~dgdvILT~g~SsaV~~vL~~A~e~--gk~f~ViV~ES------RP~~EG~~La~eL~~~-GI~v 508 (658)
+.|++.|+++ |++|++|. .++++++..+..+.... .+.++|+-+.+ .|......|++.|.+. |+++
T Consensus 93 ~~ia~~AA~~l~~~i~~~~~ig-l~~GsT~~~~~~~L~~~~~~~~~~vv~l~ggl~~~~~~~~~~~~i~~~la~~~~~~~ 171 (315)
T 2w48_A 93 SAMGQHGALLVDRLLEPGDIIG-FSWGRAVRSLVENLPQRSQSRQVICVPIIGGPSGKLESRYHVNTLTYGAAARLKAES 171 (315)
T ss_dssp HHHHHHHHHHHHHHCCTTCEEE-ECCSHHHHHHHTTSCCCSSCCCCEEEESBCBCTTSSCGGGCHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHhCCCCCEEE-ECChHHHHHHHHhhccccCCCCcEEEEcCCCCCCCCccccCHHHHHHHHHHHHCCce
Confidence 4566666664 88888755 57888876766655322 14577776643 3444555677888765 8777
Q ss_pred EEEcc-----hH-HH-HHh------------hhccEEEEcce
Q 006152 509 TYTHI-----NA-IS-YII------------HEVTRVFLGAS 531 (658)
Q Consensus 509 T~I~D-----sA-v~-~~M------------~~Vd~VlvGAd 531 (658)
.++.- +. .. .++ .++|+.|+|.-
T Consensus 172 ~~l~~P~~~~~~~~~~~l~~~~~~~~~l~~~~~~DiailGIG 213 (315)
T 2w48_A 172 HLADFPALLDNPLIRNGIMQSQHFKTISSYWDSLDVALVGIG 213 (315)
T ss_dssp CCCCSBSBCSSHHHHHHHHHSHHHHHHHHHHTTCSEEEECCB
T ss_pred eEeeCCcccCCHHHHHHHHhChHHHHHHHHHhcCCEEEEccC
Confidence 54421 11 21 112 26999999987
No 61
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=60.05 E-value=18 Score=35.54 Aligned_cols=71 Identities=15% Similarity=0.183 Sum_probs=45.5
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCC-eeEEEEeC-CCCCchHHHHHHHHHhCCCcEEEEcc----------hHHHHHhh--
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGK-QFRVVIVD-SRPKHEGKLLLRRLVRKGLSCTYTHI----------NAISYIIH-- 521 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk-~f~ViV~E-SRP~~EG~~La~eL~~~GI~vT~I~D----------sAv~~~M~-- 521 (658)
-.||.-|.++.++.+|.. .+.|. .++|..+= .+|...|.+.| .+.|||+.++.. ..+...++
T Consensus 10 i~vl~SG~gsnl~all~~-~~~~~l~~~I~~Visn~~~a~~l~~A---~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~ 85 (209)
T 4ds3_A 10 VVIFISGGGSNMEALIRA-AQAPGFPAEIVAVFSDKAEAGGLAKA---EAAGIATQVFKRKDFASKEAHEDAILAALDVL 85 (209)
T ss_dssp EEEEESSCCHHHHHHHHH-HTSTTCSEEEEEEEESCTTCTHHHHH---HHTTCCEEECCGGGSSSHHHHHHHHHHHHHHH
T ss_pred EEEEEECCcHHHHHHHHH-HHcCCCCcEEEEEEECCcccHHHHHH---HHcCCCEEEeCccccCCHHHHHHHHHHHHHhc
Confidence 357888999998776654 44443 45554333 37877775433 467999988752 34445555
Q ss_pred hccEEEEcc
Q 006152 522 EVTRVFLGA 530 (658)
Q Consensus 522 ~Vd~VlvGA 530 (658)
++|.+++-+
T Consensus 86 ~~Dliv~ag 94 (209)
T 4ds3_A 86 KPDIICLAG 94 (209)
T ss_dssp CCSEEEESS
T ss_pred CCCEEEEec
Confidence 588888754
No 62
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=59.78 E-value=58 Score=32.78 Aligned_cols=98 Identities=17% Similarity=0.142 Sum_probs=55.0
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc--------hHHHHHhh--hccE
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI--------NAISYIIH--EVTR 525 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D--------sAv~~~M~--~Vd~ 525 (658)
.+++|.|.+.++..++..+.+.| -+|++.+ |.+.|......+...|+.+.++.. ..+-..+. ++..
T Consensus 72 ~i~~~~g~t~a~~~~~~~~~~~g--d~vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~ 147 (393)
T 2huf_A 72 TFCLSASGHGGMEATLCNLLEDG--DVILIGH--TGHWGDRSADMATRYGADVRVVKSKVGQSLSLDEIRDALLIHKPSV 147 (393)
T ss_dssp EEEESSCHHHHHHHHHHHHCCTT--CEEEEEE--SSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSE
T ss_pred EEEEcCcHHHHHHHHHHHHhCCC--CEEEEEC--CCcchHHHHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhccCCcE
Confidence 35677777777766666554333 3566654 444454333444567888877752 22333333 3555
Q ss_pred EEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 526 VFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 526 VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
|++- ..-...|.+.. --.|+-+|++|++.+++
T Consensus 148 v~~~-~~~nptG~~~~---l~~i~~~~~~~~~~li~ 179 (393)
T 2huf_A 148 LFLT-QGDSSTGVLQG---LEGVGALCHQHNCLLIV 179 (393)
T ss_dssp EEEE-SEETTTTEECC---CTTHHHHHHHTTCEEEE
T ss_pred EEEE-ccCCCccccCC---HHHHHHHHHHcCCEEEE
Confidence 5542 22223354444 24577788999987776
No 63
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=59.59 E-value=41 Score=33.68 Aligned_cols=102 Identities=12% Similarity=0.065 Sum_probs=56.6
Q ss_pred cCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc------hHHHHHhh-hccE
Q 006152 453 RDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI------NAISYIIH-EVTR 525 (658)
Q Consensus 453 ~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D------sAv~~~M~-~Vd~ 525 (658)
....+++|-|.+.++..+++.+.+.| -+|++.+ |.+.+... .+...|+.+..+.. ..+-..+. +...
T Consensus 80 ~~~~i~~t~g~~~a~~~~~~~~~~~g--d~vl~~~--~~~~~~~~--~~~~~g~~~~~~~~~~~~d~~~l~~~l~~~~~~ 153 (377)
T 3fdb_A 80 RPEWIFPIPDVVRGLYIAIDHFTPAQ--SKVIVPT--PAYPPFFH--LLSATQREGIFIDATGGINLHDVEKGFQAGARS 153 (377)
T ss_dssp CGGGEEEESCHHHHHHHHHHHHSCTT--CCEEEEE--SCCTHHHH--HHHHHTCCEEEEECTTSCCHHHHHHHHHTTCCE
T ss_pred CHHHEEEeCChHHHHHHHHHHhcCCC--CEEEEcC--CCcHhHHH--HHHHcCCEEEEccCCCCCCHHHHHHHhccCCCE
Confidence 34567888887778866666554333 3455543 56666433 34456888888753 33444444 3444
Q ss_pred EEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 526 VFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 526 VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
|++-. --...|.++..---..++-+|++|++.+++
T Consensus 154 v~i~~-p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 188 (377)
T 3fdb_A 154 ILLCN-PYNPLGMVFAPEWLNELCDLAHRYDARVLV 188 (377)
T ss_dssp EEEES-SBTTTTBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEeC-CCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 44321 111224333333334456678999998876
No 64
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=59.20 E-value=88 Score=27.02 Aligned_cols=59 Identities=15% Similarity=0.085 Sum_probs=32.1
Q ss_pred HhCCCc---EEEEcchHHHHHhh-----hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEeecc
Q 006152 502 VRKGLS---CTYTHINAISYIIH-----EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCE 564 (658)
Q Consensus 502 ~~~GI~---vT~I~DsAv~~~M~-----~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~ae 564 (658)
.+.|++ +.+......-.++. ++|.|++|+..-- |-- --.|+..-.+ .++..+||+|+-+
T Consensus 81 ~~~~~~~~~~~~~~g~~~~~I~~~a~~~~~dliV~G~~~~~--~~~-~~~Gs~~~~v-l~~~~~pVlvv~~ 147 (150)
T 3tnj_A 81 NTLGIDPAHRWLVWGEPREEIIRIAEQENVDLIVVGSHGRH--GLA-LLLGSTANSV-LHYAKCDVLAVRL 147 (150)
T ss_dssp HHHTCCGGGEEEEESCHHHHHHHHHHHTTCSEEEEEEC-----------CCCHHHHH-HHHCSSEEEEEEC
T ss_pred HHcCCCcceEEEecCCHHHHHHHHHHHcCCCEEEEecCCCC--CcC-eEecchHHHH-HHhCCCCEEEEeC
Confidence 345776 33334444344433 7999999998632 222 3456655544 4556799999743
No 65
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=58.81 E-value=86 Score=26.78 Aligned_cols=58 Identities=12% Similarity=0.053 Sum_probs=34.6
Q ss_pred HHhCCCcE--EEEc-chHHHHHhh-----hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEeecc
Q 006152 501 LVRKGLSC--TYTH-INAISYIIH-----EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCE 564 (658)
Q Consensus 501 L~~~GI~v--T~I~-DsAv~~~M~-----~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~ae 564 (658)
+.+.|+++ +.+. ......++. ++|.|++|.+ .+ . ..+.|+. .--+.++.++||+|+-+
T Consensus 73 ~~~~~~~~~~~~~~~g~~~~~I~~~a~~~~~dliV~G~~---~~-~-~~~lgs~-~~~vl~~~~~pVlvv~~ 138 (141)
T 1jmv_A 73 AESVDYPISEKLSGSGDLGQVLSDAIEQYDVDLLVTGHH---QD-F-WSKLMSS-TRQVMNTIKIDMLVVPL 138 (141)
T ss_dssp HHHSSSCCCCEEEEEECHHHHHHHHHHHTTCCEEEEEEC---CC-C-HHHHHHH-HHHHHTTCCSEEEEEEC
T ss_pred HHHcCCCceEEEEecCCHHHHHHHHHHhcCCCEEEEeCC---Cc-h-hhhhcch-HHHHHhcCCCCEEEeeC
Confidence 34568875 2332 233333332 4999999987 22 2 3446743 33456777899999843
No 66
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=58.69 E-value=13 Score=38.17 Aligned_cols=107 Identities=19% Similarity=0.202 Sum_probs=71.1
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEcceeE
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASSV 533 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~VlvGAdaV 533 (658)
+-|+++.+-....+..++.+|.+.|.+.-|++.+.-|..+-.+|.+...+.|+ .++-.|+++.+-+...+.......+
T Consensus 70 ~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi--~viGPNc~Gii~~~~~~~~~~~~~~ 147 (294)
T 2yv1_A 70 DANASVIFVPAPFAKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAEDVGV--KIIGPNTPGIASPKVGKLGIIPMEV 147 (294)
T ss_dssp CCCEEEECCCHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTC--EEECSSCCEEEETTTEEEECCCGGG
T ss_pred CCCEEEEccCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCC--EEEcCCCceeeccCcceeeecccCC
Confidence 34788888788888889999999887766666776665555566677777787 4665666655544433332222223
Q ss_pred ecCC--CeecccchHHHHH--HHhhCCCCeEee
Q 006152 534 LSNG--TVCSRVGTACVAM--VAYGFHIPVLVC 562 (658)
Q Consensus 534 ~aNG--~VvNKiGT~~lAl--~Ak~~~VPVyV~ 562 (658)
..-| +++++.||+..++ .+...++.|--+
T Consensus 148 ~~~G~va~vSqSG~l~~~~~~~~~~~g~G~s~~ 180 (294)
T 2yv1_A 148 LKEGSVGMVSRSGTLTYEIAHQIKKAGFGVSTC 180 (294)
T ss_dssp CCEEEEEEEESCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCEEEEECCHHHHHHHHHHHHhCCCCeEEE
Confidence 3344 5789999998887 456778877543
No 67
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=58.54 E-value=42 Score=32.92 Aligned_cols=102 Identities=10% Similarity=0.026 Sum_probs=57.7
Q ss_pred CEEEeeCChHHHH-HHHHHHHHcCCeeEEEEeCCCCC---chHHHHHHHHHhCCCcEEEEc--c-hHHHHHhhhccEEEE
Q 006152 456 DVLLTYGSSSAVE-MILQHAHELGKQFRVVIVDSRPK---HEGKLLLRRLVRKGLSCTYTH--I-NAISYIIHEVTRVFL 528 (658)
Q Consensus 456 dvILT~g~SsaV~-~vL~~A~e~gk~f~ViV~ESRP~---~EG~~La~eL~~~GI~vT~I~--D-sAv~~~M~~Vd~Vlv 528 (658)
.+||..|-+..+. .+++.+.++| ++|+++.-++. .+..+.+..|...|+.+.... | ..+..+++.+|.||.
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~ 82 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLG--HPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS 82 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTT--CCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCC--CcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEE
Confidence 4577777543322 2234444556 56666644332 122333345666776543322 2 356667777777765
Q ss_pred cceeEecCCCeecccchHHHHHHHhhCC-CCeEee
Q 006152 529 GASSVLSNGTVCSRVGTACVAMVAYGFH-IPVLVC 562 (658)
Q Consensus 529 GAdaV~aNG~VvNKiGT~~lAl~Ak~~~-VPVyV~ 562 (658)
-|-.... -.|-.|+..+.-+|+..+ +.-+|.
T Consensus 83 ~a~~~~~---~~~~~~~~~l~~aa~~~g~v~~~v~ 114 (313)
T 1qyd_A 83 ALAGGVL---SHHILEQLKLVEAIKEAGNIKRFLP 114 (313)
T ss_dssp CCCCSSS---STTTTTHHHHHHHHHHSCCCSEEEC
T ss_pred CCccccc---hhhHHHHHHHHHHHHhcCCCceEEe
Confidence 4432111 126778999999999998 887774
No 68
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=58.51 E-value=1.2e+02 Score=30.07 Aligned_cols=100 Identities=16% Similarity=0.121 Sum_probs=56.6
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHc-----------CCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch--------
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHEL-----------GKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN-------- 514 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~-----------gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds-------- 514 (658)
...+++|.|.+.++..++..+... ++.-+|++.+ |.+.+... .+...|+.+..+...
T Consensus 86 ~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~--~~~~~~~~--~~~~~g~~~~~v~~~~~~~~d~~ 161 (397)
T 3f9t_A 86 DAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPI--TAHFSFEK--GREMMDLEYIYAPIKEDYTIDEK 161 (397)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEET--TCCTHHHH--HHHHHTCEEEEECBCTTSSBCHH
T ss_pred CCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECC--cchhHHHH--HHHHcCceeEEEeeCCCCcCCHH
Confidence 345678887777777777666543 2244666644 55555332 333458888888532
Q ss_pred HHHHHhhh--ccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 515 AISYIIHE--VTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 515 Av~~~M~~--Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
.+-..+.+ ..+|++-. --...|.+.. --.|+-+|++|++.+++
T Consensus 162 ~l~~~i~~~~~~~v~~~~-~~nptG~~~~---l~~i~~l~~~~~~~li~ 206 (397)
T 3f9t_A 162 FVKDAVEDYDVDGIIGIA-GTTELGTIDN---IEELSKIAKENNIYIHV 206 (397)
T ss_dssp HHHHHHHHSCCCEEEEEB-SCTTTCCBCC---HHHHHHHHHHHTCEEEE
T ss_pred HHHHHHhhcCCeEEEEEC-CCCCCCCCCC---HHHHHHHHHHhCCeEEE
Confidence 33344443 44444322 2233444432 34577789999998776
No 69
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=57.58 E-value=78 Score=32.66 Aligned_cols=101 Identities=17% Similarity=0.101 Sum_probs=59.0
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc-----------hHHHHHhh-
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI-----------NAISYIIH- 521 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D-----------sAv~~~M~- 521 (658)
...+++|-|.+.+++.+|+.+. +..-+|++.+ |.+.|... .+...|..+..+.. ..+-..+.
T Consensus 119 ~~~v~~~~g~~ea~~~a~~~~~--~~gd~Vi~~~--~~y~~~~~--~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~ 192 (421)
T 3l8a_A 119 KEDILFIDGVVPAISIALQAFS--EKGDAVLINS--PVYYPFAR--TIRLNDHRLVENSLQIINGRFEIDFEQLEKDIID 192 (421)
T ss_dssp GGGEEEESCHHHHHHHHHHHHS--CTEEEEEEEE--SCCHHHHH--HHHHTTEEEEEEECEEETTEEECCHHHHHHHHHH
T ss_pred HHHEEEcCCHHHHHHHHHHHhc--CCCCEEEECC--CCcHHHHH--HHHHCCCEEEeccccccCCCeeeCHHHHHHHhhc
Confidence 3457777777778877777653 3344666644 66766443 33446766655531 23444443
Q ss_pred -hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 522 -EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 522 -~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
++..|++ ..---..|.++.+----.|+-+|++|++.+++
T Consensus 193 ~~~~~vil-~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 232 (421)
T 3l8a_A 193 NNVKIYLL-CSPHNPGGRVWDNDDLIKIAELCKKHGVILVS 232 (421)
T ss_dssp TTEEEEEE-ESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred cCCeEEEE-CCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 4555655 33333345444444455677789999988775
No 70
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=57.38 E-value=49 Score=36.02 Aligned_cols=112 Identities=16% Similarity=0.241 Sum_probs=70.9
Q ss_pred ccCCCEEEeeCChHHHHHHH-HHHHHcCCeeEEEEeCCCCC-c-hHHHHHHHHHhCCCcEEEE-cc----hHHHHHhhhc
Q 006152 452 IRDGDVLLTYGSSSAVEMIL-QHAHELGKQFRVVIVDSRPK-H-EGKLLLRRLVRKGLSCTYT-HI----NAISYIIHEV 523 (658)
Q Consensus 452 I~dgdvILT~g~SsaV~~vL-~~A~e~gk~f~ViV~ESRP~-~-EG~~La~eL~~~GI~vT~I-~D----sAv~~~M~~V 523 (658)
+..+.+||..|-+.-+...| +.+.++|.. +|+++.-++. . .-.++..+|.+.|..++++ +| .++..++.++
T Consensus 223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~-~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i 301 (486)
T 2fr1_A 223 WKPTGTVLVTGGTGGVGGQIARWLARRGAP-HLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI 301 (486)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTCS-EEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHcCCC-EEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH
Confidence 45667888888776554444 344455543 3555443322 2 2346678898899888776 34 4566777765
Q ss_pred ------cEEEEcceeEecCCCe-------------ecccchHHHHHHHhhCCCCeEeeccc
Q 006152 524 ------TRVFLGASSVLSNGTV-------------CSRVGTACVAMVAYGFHIPVLVCCEA 565 (658)
Q Consensus 524 ------d~VlvGAdaV~aNG~V-------------vNKiGT~~lAl~Ak~~~VPVyV~aet 565 (658)
|.||-.|- +..+|.+ .|-.|+..+.-+++.++..++|++.+
T Consensus 302 ~~~g~ld~VIh~AG-~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS 361 (486)
T 2fr1_A 302 GDDVPLSAVFHAAA-TLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSS 361 (486)
T ss_dssp CTTSCEEEEEECCC-CCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEE
T ss_pred HhcCCCcEEEECCc-cCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcC
Confidence 77776553 3334432 25678888888888888888887665
No 71
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=57.00 E-value=67 Score=32.08 Aligned_cols=109 Identities=12% Similarity=0.064 Sum_probs=62.3
Q ss_pred CCCEEEeeCChHHHHHHH-HHHHHcCCeeEEEEeCCCCCchHHHHHHHHHh-------CCCcEEEEcc---hHHHHHhhh
Q 006152 454 DGDVLLTYGSSSAVEMIL-QHAHELGKQFRVVIVDSRPKHEGKLLLRRLVR-------KGLSCTYTHI---NAISYIIHE 522 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL-~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~-------~GI~vT~I~D---sAv~~~M~~ 522 (658)
.+.+||..|-+.-|..-| +.+.++| .+|+++.-++...-. ....|.. .++.+..... ..+..++..
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 100 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLN--QVVIGLDNFSTGHQY-NLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKG 100 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECCSSCCHH-HHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTT
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCCCCchh-hhhhhhhccccccCCceEEEEccCCCHHHHHHHhcC
Confidence 467888888765554444 3444555 577777654433222 2333333 4544433221 345566667
Q ss_pred ccEEEEcceeEecCC--------CeecccchHHHHHHHhhCCCCeEeeccc
Q 006152 523 VTRVFLGASSVLSNG--------TVCSRVGTACVAMVAYGFHIPVLVCCEA 565 (658)
Q Consensus 523 Vd~VlvGAdaV~aNG--------~VvNKiGT~~lAl~Ak~~~VPVyV~aet 565 (658)
+|.||--|-....+. --.|-.||..+.-+|+.+++.-+|.+.+
T Consensus 101 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 151 (351)
T 3ruf_A 101 VDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS 151 (351)
T ss_dssp CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 777776553211000 1357889999999999999876665544
No 72
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=56.83 E-value=33 Score=33.91 Aligned_cols=102 Identities=14% Similarity=0.107 Sum_probs=58.2
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch-------HHHHHhhh----
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN-------AISYIIHE---- 522 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds-------Av~~~M~~---- 522 (658)
...+++|.|.+.++..+++.+.+.| -+|++. .|.+.+...+..+...|+.+..+... .+-..+.+
T Consensus 66 ~~~v~~~~g~t~a~~~~~~~~~~~g--d~vl~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~ 141 (359)
T 1svv_A 66 DADVHFISGGTQTNLIACSLALRPW--EAVIAT--QLGHISTHETGAIEATGHKVVTAPCPDGKLRVADIESALHENRSE 141 (359)
T ss_dssp TSEEEEESCHHHHHHHHHHHHCCTT--EEEEEE--TTSHHHHSSTTHHHHTTCCEEEECCTTSCCCHHHHHHHHHHSCST
T ss_pred CccEEEeCCchHHHHHHHHHHhCCC--CEEEEc--ccchHHHHHHHHHhcCCCeeEEEeCCCCeecHHHHHHHHHHHHhc
Confidence 3457788888888877776664333 356664 45555543322356679988888632 33334433
Q ss_pred ----ccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 523 ----VTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 523 ----Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
+..|++- . ....|.++..-=--.++-+|++|++.+++
T Consensus 142 ~~~~~~~v~~~-~-~~ptG~~~~~~~l~~i~~~~~~~~~~li~ 182 (359)
T 1svv_A 142 HMVIPKLVYIS-N-TTEVGTQYTKQELEDISASCKEHGLYLFL 182 (359)
T ss_dssp TSCEEEEEEEE-S-SCTTSCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred cCCCceEEEEE-c-CCCCceecCHHHHHHHHHHHHHhCCEEEE
Confidence 3445443 2 22335554431123466788999987776
No 73
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=56.78 E-value=93 Score=26.55 Aligned_cols=36 Identities=19% Similarity=0.261 Sum_probs=24.4
Q ss_pred hccEEEEcceeEecCCCeec-ccchHHHHHHHhhCCCCeEee
Q 006152 522 EVTRVFLGASSVLSNGTVCS-RVGTACVAMVAYGFHIPVLVC 562 (658)
Q Consensus 522 ~Vd~VlvGAdaV~aNG~VvN-KiGT~~lAl~Ak~~~VPVyV~ 562 (658)
++|.|++|+++ +| +-. -.|+..-. +.++.++||+|+
T Consensus 106 ~~dliV~G~~~---~~-~~~~~~Gs~~~~-v~~~~~~pVlvv 142 (143)
T 3fdx_A 106 PADLVIIASHR---PD-ITTYLLGSNAAA-VVRHAECSVLVV 142 (143)
T ss_dssp TCSEEEEESSC---TT-CCSCSSCHHHHH-HHHHCSSEEEEE
T ss_pred CCCEEEEeCCC---CC-CeeeeeccHHHH-HHHhCCCCEEEe
Confidence 69999999984 33 322 24665444 456778999986
No 74
>1xr4_A Putative citrate lyase alpha chain/citrate-ACP TR; the midwest center for structural genomics, MCSG, structural genomics; 2.37A {Salmonella typhimurium} SCOP: c.124.1.2 c.124.1.2
Probab=56.74 E-value=47 Score=36.90 Aligned_cols=115 Identities=14% Similarity=0.167 Sum_probs=68.0
Q ss_pred HHHHHh--ccCCCEEEeeCCh----HHHHHHHHHHHHcC-CeeEEEEeCCCCC-------------------chHHHHHH
Q 006152 446 KHAVTK--IRDGDVLLTYGSS----SAVEMILQHAHELG-KQFRVVIVDSRPK-------------------HEGKLLLR 499 (658)
Q Consensus 446 ~~a~~~--I~dgdvILT~g~S----saV~~vL~~A~e~g-k~f~ViV~ESRP~-------------------~EG~~La~ 499 (658)
+.|+++ |+||++|...+.. .++..+.+++.+++ ++++++-....+. +-|..+ +
T Consensus 50 eEAv~~~~IkdG~tV~~gg~~G~P~~Li~AL~~r~~~~g~kdLtli~~s~g~~~~~l~~~i~~g~v~r~~~~~~g~~~-r 128 (509)
T 1xr4_A 50 EEAIRRSGLKNGMTISFHHAFRGGDKVVNMVMAKLAEMGFRDLTLASSSLIDAHWPLIEHIKNGVVRQIYTSGLRGKL-G 128 (509)
T ss_dssp HHHHHHTTCCTTCEEEECCTTGGGCCHHHHHHHHHHHTTCCSEEEEESCCCGGGTTHHHHHHTTSEEEEEESBCCHHH-H
T ss_pred HHHhcCCCCCCcCEEEECCccCCHHHHHHHHHHHHHhcCCcceEEEecCCcCcchhHHHHhhcCceEEEEEccCCHHH-H
Confidence 345567 8999999988754 34545455555444 4677775422221 112122 2
Q ss_pred HHHhC---CCcEEEEcchHHHHHhh----hccEEEEcceeEecCCCeecccc-----hHHHHHHHhhCCCCeEe
Q 006152 500 RLVRK---GLSCTYTHINAISYIIH----EVTRVFLGASSVLSNGTVCSRVG-----TACVAMVAYGFHIPVLV 561 (658)
Q Consensus 500 eL~~~---GI~vT~I~DsAv~~~M~----~Vd~VlvGAdaV~aNG~VvNKiG-----T~~lAl~Ak~~~VPVyV 561 (658)
++.+. .+|+.|..-....++|. .+|..|+.|...-.+|.+.-+-| +...+.++.....-|++
T Consensus 129 ~~i~~G~~~~P~~~s~~~g~p~ll~~~~l~iDVAlI~as~aD~~Gnls~~~g~~~~~s~~~~~a~a~~A~~VIa 202 (509)
T 1xr4_A 129 EEISAGLMENPVQIHSHGGRVKLIQSGELNIDVAFLGVPCCDEFGNANGFSGKSRCGSLGYAQVDAQYAKCVVL 202 (509)
T ss_dssp HHHHHTCCSSCEEECCHHHHHHHHHTTSSCCSEEEEEESEEETTCCEESSSSSSCCCCCTTHHHHHHHCSEEEE
T ss_pred HHHHcCCCcCCeeEeccCCHHHHHhcCCCCceEEEEEeccCCCCceEEEeCCCCcccchHHHHHHHhhCCEEEE
Confidence 23322 36777764334677775 58999999999999999874323 44444445544444444
No 75
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=56.58 E-value=27 Score=34.48 Aligned_cols=74 Identities=15% Similarity=0.183 Sum_probs=46.9
Q ss_pred EEEeeCChHHHHHHHHHHHHcCCeeEEEEeC-CCCCchHHHHHHHHHhCCCcEEEEc----------chHHHHHhh--hc
Q 006152 457 VLLTYGSSSAVEMILQHAHELGKQFRVVIVD-SRPKHEGKLLLRRLVRKGLSCTYTH----------INAISYIIH--EV 523 (658)
Q Consensus 457 vILT~g~SsaV~~vL~~A~e~gk~f~ViV~E-SRP~~EG~~La~eL~~~GI~vT~I~----------DsAv~~~M~--~V 523 (658)
.||.-|+++.++.+|.... .|..++|..+= .+|...|.+.| .+.|||+.++. |..+-..++ ++
T Consensus 9 avl~SG~Gsnl~all~~~~-~~~~~eI~~Vis~~~~a~~~~~A---~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~ 84 (215)
T 3tqr_A 9 VVLISGNGTNLQAIIGAIQ-KGLAIEIRAVISNRADAYGLKRA---QQADIPTHIIPHEEFPSRTDFESTLQKTIDHYDP 84 (215)
T ss_dssp EEEESSCCHHHHHHHHHHH-TTCSEEEEEEEESCTTCHHHHHH---HHTTCCEEECCGGGSSSHHHHHHHHHHHHHTTCC
T ss_pred EEEEeCCcHHHHHHHHHHH-cCCCCEEEEEEeCCcchHHHHHH---HHcCCCEEEeCccccCchhHhHHHHHHHHHhcCC
Confidence 4566699999977665544 44445655443 37777775444 45799998874 344555555 58
Q ss_pred cEEEEcc-eeEe
Q 006152 524 TRVFLGA-SSVL 534 (658)
Q Consensus 524 d~VlvGA-daV~ 534 (658)
|.+++-+ -.|+
T Consensus 85 Dliv~agy~~il 96 (215)
T 3tqr_A 85 KLIVLAGFMRKL 96 (215)
T ss_dssp SEEEESSCCSCC
T ss_pred CEEEEccchhhC
Confidence 9988854 3444
No 76
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=56.33 E-value=53 Score=33.08 Aligned_cols=98 Identities=16% Similarity=0.139 Sum_probs=57.0
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc--------hHHHHHhh--hccE
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI--------NAISYIIH--EVTR 525 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D--------sAv~~~M~--~Vd~ 525 (658)
.+++|.|.+.++..++..+.+.| -+|++.+ |.+.+..+...+...|+.+..+.. ..+-..+. ++..
T Consensus 71 ~v~~~~g~t~al~~~~~~~~~~g--d~vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~ 146 (396)
T 2ch1_A 71 TMCVSGSAHAGMEAMLSNLLEEG--DRVLIAV--NGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKC 146 (396)
T ss_dssp EEEESSCHHHHHHHHHHHHCCTT--CEEEEEE--SSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSE
T ss_pred EEEECCcHHHHHHHHHHHhcCCC--CeEEEEc--CCcccHHHHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCE
Confidence 36677777777766666554334 3566553 556665433455677988887752 23333343 3566
Q ss_pred EEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 526 VFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 526 VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
|++ ..--...|.++. --.|+-+|++|++.+++
T Consensus 147 v~~-~~~~nptG~~~~---~~~i~~l~~~~~~~li~ 178 (396)
T 2ch1_A 147 LFL-THGDSSSGLLQP---LEGVGQICHQHDCLLIV 178 (396)
T ss_dssp EEE-ESEETTTTEECC---CTTHHHHHHHTTCEEEE
T ss_pred EEE-ECCCCCCceecC---HHHHHHHHHHcCCEEEE
Confidence 665 232234465555 23567788889987665
No 77
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=56.31 E-value=49 Score=33.37 Aligned_cols=98 Identities=18% Similarity=0.145 Sum_probs=57.2
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc--------hHHHHHhh--hccE
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI--------NAISYIIH--EVTR 525 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D--------sAv~~~M~--~Vd~ 525 (658)
.+++|.|.+.++..++..+.+.|. +|++.+ |.+.|..+...+...|+.+..+.. ..+-..+. ++..
T Consensus 87 ~v~~t~g~t~al~~~~~~~~~~gd--~Vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~ 162 (393)
T 1vjo_A 87 TIAVSGTGTAAMEATIANAVEPGD--VVLIGV--AGYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAI 162 (393)
T ss_dssp EEEESSCHHHHHHHHHHHHCCTTC--EEEEEE--SSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSE
T ss_pred EEEEeCchHHHHHHHHHhccCCCC--EEEEEc--CChhHHHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhhCCceE
Confidence 477777777778776666644343 566553 666664444556678888877752 23333343 3555
Q ss_pred EEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 526 VFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 526 VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
|++- .--...|.+.. + -.|+-+|++|++.+++
T Consensus 163 v~~~-~~~nptG~~~~-l--~~i~~l~~~~~~~li~ 194 (393)
T 1vjo_A 163 LALV-HAETSTGARQP-L--EGVGELCREFGTLLLV 194 (393)
T ss_dssp EEEE-SEETTTTEECC-C--TTHHHHHHHHTCEEEE
T ss_pred EEEe-ccCCCcceecc-H--HHHHHHHHHcCCEEEE
Confidence 5542 22233455543 2 3566778888987765
No 78
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=56.24 E-value=1.6e+02 Score=29.15 Aligned_cols=97 Identities=18% Similarity=0.219 Sum_probs=52.2
Q ss_pred CCEEEeeCChHHHHHHHHHHH----HcCCeeEEEEeCCCCCchHHHHH-HHHHhCCCcEEEEcc--------hHHHHHhh
Q 006152 455 GDVLLTYGSSSAVEMILQHAH----ELGKQFRVVIVDSRPKHEGKLLL-RRLVRKGLSCTYTHI--------NAISYIIH 521 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~----e~gk~f~ViV~ESRP~~EG~~La-~eL~~~GI~vT~I~D--------sAv~~~M~ 521 (658)
..+++|.|.+.++..++..+. +.|. +|++.+ |.+.+...+ ..|...|+.+..+.. ..+-..+.
T Consensus 61 ~~v~~~~g~t~a~~~~~~~l~~~~~~~gd--~Vl~~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~ 136 (382)
T 4eb5_A 61 GTVVFTSGATEANNLAIIGYAMRNARKGK--HILVSA--VEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLR 136 (382)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHGGGCC--EEEEET--TCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCC
T ss_pred CeEEEcCchHHHHHHHHHHHHhhccCCCC--EEEECC--CcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhc
Confidence 356777777777766665554 3443 566643 445554333 445567998888853 12222222
Q ss_pred hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCC
Q 006152 522 EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIP 558 (658)
Q Consensus 522 ~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VP 558 (658)
+=.++|+-..--...|.+.. --.|+-+|++|++.
T Consensus 137 ~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~ 170 (382)
T 4eb5_A 137 DDTILVSVQHANNEIGTIQP---VEEISEVLAGKAAL 170 (382)
T ss_dssp TTEEEEECCSBCTTTCBBCC---HHHHHHHHTTSSEE
T ss_pred CCCeEEEEeccCCCccccCC---HHHHHHHHHHCCCE
Confidence 11233333322223355544 24677788999876
No 79
>3qli_A Coenzyme A transferase; COEN transferase; 1.90A {Yersinia pestis} PDB: 3qlk_A 3s8d_A
Probab=56.20 E-value=20 Score=39.40 Aligned_cols=96 Identities=16% Similarity=0.142 Sum_probs=62.5
Q ss_pred HHHHHHhccCCCEEEeeCChH---HHHHHHHHHHH--cCCeeEEEEeC---------C----------CCCchHHHHHHH
Q 006152 445 VKHAVTKIRDGDVLLTYGSSS---AVEMILQHAHE--LGKQFRVVIVD---------S----------RPKHEGKLLLRR 500 (658)
Q Consensus 445 a~~a~~~I~dgdvILT~g~Ss---aV~~vL~~A~e--~gk~f~ViV~E---------S----------RP~~EG~~La~e 500 (658)
++.|+++|++|++|.+-|... .+...|.+-.+ .-+.+++|..- . ++++.| ...+.
T Consensus 29 aeEAv~lIkdGdtV~~gG~~g~P~~L~~AL~~r~~~g~~~~ltl~~~~~~G~~~~~~~~~~~~~~~~~~~~f~~-~~~R~ 107 (455)
T 3qli_A 29 PEEAVSSIASGSHLSMGMFAAEPPALLKALADRATRGDIGDLRVYYFETAKIAGDTILRYELNNRIKPYSMFVT-AVERA 107 (455)
T ss_dssp HHHHTTTCCTTCEEEECSGGGSCHHHHHHHHHHHHTTCCCSEEEEESSCCHHHHHTTTCGGGTTTEEEEESSCC-HHHHH
T ss_pred HHHHHHhCCCCCEEEECCcccCHHHHHHHHHHHHhhCCCcceEEEEecccccchhhhhChhhcCcEEEeeCcCC-hhHHH
Confidence 346778999999999987653 23233332222 23456776421 1 134555 33566
Q ss_pred HHhCC--------CcEEEEcchHHHHHhh---hccEEEEcceeEecCCCeec
Q 006152 501 LVRKG--------LSCTYTHINAISYIIH---EVTRVFLGASSVLSNGTVCS 541 (658)
Q Consensus 501 L~~~G--------I~vT~I~DsAv~~~M~---~Vd~VlvGAdaV~aNG~VvN 541 (658)
+.+.| +..+-+..+.+..+++ .+|.+|+.|...-.+|.+.-
T Consensus 108 ~i~~G~~~~~~~~~~y~p~~ls~~p~~~~~~~~iDVAli~vs~~D~~G~~s~ 159 (455)
T 3qli_A 108 LIRRGIEDGGRKVVNYVPSNFHQAPRLLAEEIGIDTFMHTVSPMDCHGYFSL 159 (455)
T ss_dssp HHHHHHHTTTCCCCCCCCCCGGGHHHHHHTTTCCSEEEEEECCCCTTSEEEC
T ss_pred HHhCCCcccCcCcEEEECccHHHHHHHHHhcCCCCEEEEEEecCCCCceEEE
Confidence 67767 5555556788888886 58999999999999997754
No 80
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=55.53 E-value=14 Score=37.87 Aligned_cols=107 Identities=17% Similarity=0.131 Sum_probs=72.2
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEcceeE
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASSV 533 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~VlvGAdaV 533 (658)
+-|+++.+-....+..++.+|.+.|.+.-|++.+.-|..+-.++.....+.|+ .++-.|+++.+-+...+.......+
T Consensus 64 ~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi--~vigPNc~Gii~~~~~~~~~~~~~~ 141 (288)
T 1oi7_A 64 EVDASIIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGS--RLIGGNCPGIISAEETKIGIMPGHV 141 (288)
T ss_dssp CCSEEEECCCHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTC--EEEESSSCEEEETTTEEEESSCGGG
T ss_pred CCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCC--EEEeCCCCeEEcCCCceeEEcccCC
Confidence 45788878788888899999999888766777776665554566677777777 4666666665555443333322323
Q ss_pred ecCC--CeecccchHHHHHH--HhhCCCCeEee
Q 006152 534 LSNG--TVCSRVGTACVAMV--AYGFHIPVLVC 562 (658)
Q Consensus 534 ~aNG--~VvNKiGT~~lAl~--Ak~~~VPVyV~ 562 (658)
..-| +++++.||+..+++ +...++.|--+
T Consensus 142 ~~~G~va~vsqSG~l~~~~~~~~~~~g~G~s~~ 174 (288)
T 1oi7_A 142 FKRGRVGIISRSGTLTYEAAAALSQAGLGTTTT 174 (288)
T ss_dssp CCEEEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCEEEEECCHHHHHHHHHHHHhCCCCEEEE
Confidence 3334 57899999988876 66678877543
No 81
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=55.45 E-value=33 Score=33.59 Aligned_cols=98 Identities=10% Similarity=0.094 Sum_probs=56.3
Q ss_pred CEEEeeCChHHHHH-HHHHHHHcCCeeEEEEeCCCCC----chHHHHHHHHHhCCCcEEEEc--c-hHHHHHhhhccEEE
Q 006152 456 DVLLTYGSSSAVEM-ILQHAHELGKQFRVVIVDSRPK----HEGKLLLRRLVRKGLSCTYTH--I-NAISYIIHEVTRVF 527 (658)
Q Consensus 456 dvILT~g~SsaV~~-vL~~A~e~gk~f~ViV~ESRP~----~EG~~La~eL~~~GI~vT~I~--D-sAv~~~M~~Vd~Vl 527 (658)
.+||..|-+..+.. +++.+.++| ++|+++.-++. .+-.+.+..|...|+.+.... | ..+..+++.+|.||
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 82 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDLG--HPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI 82 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTT--CCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCC--CCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEE
Confidence 45777776433322 234444556 56666543332 122233456667787654332 2 35566677776666
Q ss_pred EcceeEecCCCeecccchHHHHHHHhhCC-CCeEee
Q 006152 528 LGASSVLSNGTVCSRVGTACVAMVAYGFH-IPVLVC 562 (658)
Q Consensus 528 vGAdaV~aNG~VvNKiGT~~lAl~Ak~~~-VPVyV~ 562 (658)
.-| +..+-.|+..++-+|+..+ ++-+|.
T Consensus 83 ~~a-------~~~~~~~~~~l~~aa~~~g~v~~~v~ 111 (308)
T 1qyc_A 83 STV-------GSLQIESQVNIIKAIKEVGTVKRFFP 111 (308)
T ss_dssp ECC-------CGGGSGGGHHHHHHHHHHCCCSEEEC
T ss_pred ECC-------cchhhhhHHHHHHHHHhcCCCceEee
Confidence 543 3334568888888899888 888774
No 82
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=55.36 E-value=35 Score=33.43 Aligned_cols=98 Identities=11% Similarity=0.048 Sum_probs=54.5
Q ss_pred CEEEeeCChHHHHH-HHHHHHHcCCeeEEEEeCCCC-C--c--hHHHHHHHHHhCCCcEEEEc--c-hHHHHHhhhccEE
Q 006152 456 DVLLTYGSSSAVEM-ILQHAHELGKQFRVVIVDSRP-K--H--EGKLLLRRLVRKGLSCTYTH--I-NAISYIIHEVTRV 526 (658)
Q Consensus 456 dvILT~g~SsaV~~-vL~~A~e~gk~f~ViV~ESRP-~--~--EG~~La~eL~~~GI~vT~I~--D-sAv~~~M~~Vd~V 526 (658)
.+||..|-+.-+.. +++.+.++| ++|+++.-++ . . +-.+.+.+|...|+.+.... | ..+..+++.+|.|
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~v 80 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAG--NPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIV 80 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHT--CCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred cEEEEECCCchHHHHHHHHHHhCC--CcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEE
Confidence 45777776433322 234444556 4555554332 1 1 22223456667787654432 2 3455666666666
Q ss_pred EEcceeEecCCCeecccchHHHHHHHhhCC-CCeEee
Q 006152 527 FLGASSVLSNGTVCSRVGTACVAMVAYGFH-IPVLVC 562 (658)
Q Consensus 527 lvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~-VPVyV~ 562 (658)
|.-| +...-.|+..+.-+|+..+ +.-+|.
T Consensus 81 i~~a-------~~~~~~~~~~l~~aa~~~g~v~~~v~ 110 (307)
T 2gas_A 81 ICAA-------GRLLIEDQVKIIKAIKEAGNVKKFFP 110 (307)
T ss_dssp EECS-------SSSCGGGHHHHHHHHHHHCCCSEEEC
T ss_pred EECC-------cccccccHHHHHHHHHhcCCceEEee
Confidence 5433 3333567888888888887 887774
No 83
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=55.21 E-value=49 Score=29.94 Aligned_cols=100 Identities=12% Similarity=0.094 Sum_probs=59.6
Q ss_pred ccCCCEEEeeCChH----HH---HHHHHHHH--HcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEE----EcchHHHH
Q 006152 452 IRDGDVLLTYGSSS----AV---EMILQHAH--ELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTY----THINAISY 518 (658)
Q Consensus 452 I~dgdvILT~g~Ss----aV---~~vL~~A~--e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~----I~DsAv~~ 518 (658)
+.++.+|+..|+-. -+ ..++.... +.+..++++++-..+...-..+-..+.+.| .+++ +....+..
T Consensus 33 ~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~G~~~~~~~~~l~~~~~~~~-~v~~~~g~~~~~~~~~ 111 (200)
T 2bfw_A 33 MDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVRE 111 (200)
T ss_dssp CCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHH
T ss_pred CCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEECCCChHHHHHHHHHHHhcC-CEEEEeccCCHHHHHH
Confidence 34555777777633 22 23344443 444678888886654112233444555666 7777 33457889
Q ss_pred HhhhccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEee
Q 006152 519 IIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVC 562 (658)
Q Consensus 519 ~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~ 562 (658)
+|..+|.+|+-... .| .| ...+=|-.+|+||++.
T Consensus 112 ~~~~ad~~l~ps~~---e~-----~~--~~~~Ea~a~G~PvI~~ 145 (200)
T 2bfw_A 112 LYGSVDFVIIPSYF---EP-----FG--LVALEAMCLGAIPIAS 145 (200)
T ss_dssp HHTTCSEEEECCSC---CS-----SC--HHHHHHHHTTCEEEEE
T ss_pred HHHHCCEEEECCCC---CC-----cc--HHHHHHHHCCCCEEEe
Confidence 99999999885432 22 23 3346677789998775
No 84
>1k6d_A Acetate COA-transferase alpha subunit; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.90A {Escherichia coli} SCOP: c.124.1.2
Probab=54.98 E-value=39 Score=33.15 Aligned_cols=21 Identities=10% Similarity=0.109 Sum_probs=18.5
Q ss_pred hccEEEEcceeEecCCCeecc
Q 006152 522 EVTRVFLGASSVLSNGTVCSR 542 (658)
Q Consensus 522 ~Vd~VlvGAdaV~aNG~VvNK 542 (658)
++|..|+-|...-.+|.+.-.
T Consensus 148 ~~DVAli~a~~aD~~Gn~~~~ 168 (220)
T 1k6d_A 148 RADLALIRAHRCDTLGNLTYQ 168 (220)
T ss_dssp CEEEEEEEEEEEETTCCEECC
T ss_pred CCcEEEEEeecCCCCceEEEe
Confidence 589999999999999997765
No 85
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=54.82 E-value=50 Score=30.17 Aligned_cols=94 Identities=15% Similarity=0.157 Sum_probs=61.2
Q ss_pred cCCCEEEeeCChH--HHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc----------hHHHHHh
Q 006152 453 RDGDVLLTYGSSS--AVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI----------NAISYII 520 (658)
Q Consensus 453 ~dgdvILT~g~Ss--aV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D----------sAv~~~M 520 (658)
..| ++++.+... -+..+.+..+ ...|++|.+++ .++.|.+.||+|+.+.. ..+.-+|
T Consensus 24 ~~g-vliSv~d~dK~~l~~~a~~l~--~lGf~i~AT~G--------Ta~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i 92 (143)
T 2yvq_A 24 QKG-ILIGIQQSFRPRFLGVAEQLH--NEGFKLFATEA--------TSDWLNANNVPATPVAWPSQEGQNPSLSSIRKLI 92 (143)
T ss_dssp CSE-EEEECCGGGHHHHHHHHHHHH--TTTCEEEEEHH--------HHHHHHHTTCCCEEECCGGGC-----CBCHHHHH
T ss_pred CCC-EEEEecccchHHHHHHHHHHH--HCCCEEEECch--------HHHHHHHcCCeEEEEEeccCCCcccccccHHHHH
Confidence 357 777776532 2334444444 35788888752 35778899999999963 3355555
Q ss_pred h--hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEee
Q 006152 521 H--EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVC 562 (658)
Q Consensus 521 ~--~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~ 562 (658)
+ ++|+||-=.+ |.--...-.|.+=-+|=.|+||++--
T Consensus 93 ~~g~i~lVInt~~-----~~~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 93 RDGSIDLVINLPN-----NNTKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp HTTSCCEEEECCC-----CCGGGHHHHHHHHHHHHHTTCCEECS
T ss_pred HCCCceEEEECCC-----CCCcCCccHHHHHHHHHHhCCCeEcC
Confidence 5 7999986443 21111345677778899999998753
No 86
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=54.61 E-value=1.7e+02 Score=29.39 Aligned_cols=98 Identities=18% Similarity=0.100 Sum_probs=56.1
Q ss_pred EEEeeCCh-HHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch--------HHHHHhh--hccE
Q 006152 457 VLLTYGSS-SAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN--------AISYIIH--EVTR 525 (658)
Q Consensus 457 vILT~g~S-saV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds--------Av~~~M~--~Vd~ 525 (658)
++++.+.+ .++..++..+.+ ..-+|++.+ |.+-|..+...+...|+.+..+... .+-..+. ++..
T Consensus 64 ~~~~~~s~t~al~~~~~~l~~--~gd~Vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~ 139 (416)
T 3isl_A 64 AYPIDGTSRAGIEAVLASVIE--PEDDVLIPI--YGRFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKI 139 (416)
T ss_dssp EEEEESCHHHHHHHHHHHHCC--TTCEEEEEE--SSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSE
T ss_pred EEEecCcHHHHHHHHHHHhcC--CCCEEEEec--CCcccHHHHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcE
Confidence 44344444 556665655533 334666655 5555544556677789988887532 3344443 4444
Q ss_pred EEEcceeEecCCCeecccchHHHHHHHhhCCCCeEee
Q 006152 526 VFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVC 562 (658)
Q Consensus 526 VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~ 562 (658)
|++- .--...|.+.. --.|+-+|++|++.+++=
T Consensus 140 v~~~-~~~nptG~~~~---l~~i~~l~~~~~~~li~D 172 (416)
T 3isl_A 140 VAMV-HGETSTGRIHP---LKAIGEACRTEDALFIVD 172 (416)
T ss_dssp EEEE-SEETTTTEECC---CHHHHHHHHHTTCEEEEE
T ss_pred EEEE-ccCCCCceecC---HHHHHHHHHHcCCEEEEE
Confidence 4433 32233454444 356888899999988773
No 87
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=54.58 E-value=80 Score=32.24 Aligned_cols=102 Identities=11% Similarity=0.037 Sum_probs=53.9
Q ss_pred CCCEEE--eeCChHHHHHHH--HHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc----------hHHHHH
Q 006152 454 DGDVLL--TYGSSSAVEMIL--QHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI----------NAISYI 519 (658)
Q Consensus 454 dgdvIL--T~g~SsaV~~vL--~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D----------sAv~~~ 519 (658)
...+++ |.|.+.++..++ ..+...| -+|++.+ |.+.+.. ..+...|+.+..+.. ..+-..
T Consensus 96 ~~~i~~~~t~g~~~a~~~~~~~~~~~~~g--d~Vl~~~--p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 169 (412)
T 1yaa_A 96 EDRVISVQSLSGTGALHISAKFFSKFFPD--KLVYLSK--PTWANHM--AIFENQGLKTATYPYWANETKSLDLNGFLNA 169 (412)
T ss_dssp TTCEEEEEEEHHHHHHHHHHHHHHHHCTT--CCEEEEE--SCCTTHH--HHHHTTTCCEEEEECEETTTTEECHHHHHHH
T ss_pred cceEEEEeccchHhHHHHHHHHHHHhCCC--CEEEEeC--CCCccHH--HHHHHcCceEEEEeeecCCCCccCHHHHHHH
Confidence 456777 888777775552 2333333 3466553 6565543 334456888776643 123333
Q ss_pred hhh---ccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 520 IHE---VTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 520 M~~---Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
+.+ .+++++=...-...|.+++.-=-..++-+|+.|++.+++
T Consensus 170 l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~ 214 (412)
T 1yaa_A 170 IQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALF 214 (412)
T ss_dssp HHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 433 244544233223334444332223567788899987665
No 88
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=54.27 E-value=77 Score=31.63 Aligned_cols=97 Identities=15% Similarity=0.057 Sum_probs=57.8
Q ss_pred EEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc--------hHHHHHhh--hccEE
Q 006152 457 VLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI--------NAISYIIH--EVTRV 526 (658)
Q Consensus 457 vILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D--------sAv~~~M~--~Vd~V 526 (658)
+++|.|.+.++..+++.+.+.| -+|++.+ +.+-|..+...+...|+.+..+.. ..+-..+. ++..|
T Consensus 77 v~~~~gg~~al~~~~~~~~~~g--d~vl~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v 152 (393)
T 3kgw_A 77 LVVSGSGHCAMETALFNLLEPG--DSFLTGT--NGIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLL 152 (393)
T ss_dssp EEESCCTTTHHHHHHHHHCCTT--CEEEEEE--SSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEE
T ss_pred EEEeCCcHHHHHHHHHhcCCCC--CEEEEEe--CCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEE
Confidence 6778888888877776664333 4566653 444444555666778988877752 23334444 45555
Q ss_pred EEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 527 FLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 527 lvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
++- .-=...|.+.. --.|+-+|++|++.+++
T Consensus 153 ~~~-~~~nptG~~~~---l~~i~~l~~~~~~~li~ 183 (393)
T 3kgw_A 153 FLV-HGESSTGVVQP---LDGFGELCHRYQCLLLV 183 (393)
T ss_dssp EEE-SEETTTTEECC---CTTHHHHHHHTTCEEEE
T ss_pred EEe-ccCCcchhhcc---HHHHHHHHHHcCCEEEE
Confidence 443 22223454444 23577789999998776
No 89
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=53.86 E-value=1.8e+02 Score=29.18 Aligned_cols=101 Identities=14% Similarity=0.191 Sum_probs=54.0
Q ss_pred CCEEEeeCChHHHHHHHHHHH----HcCCeeEEEEeCCCCCchHHHH-HHHHHhCCCcEEEEcch-----HHHHHhhhc-
Q 006152 455 GDVLLTYGSSSAVEMILQHAH----ELGKQFRVVIVDSRPKHEGKLL-LRRLVRKGLSCTYTHIN-----AISYIIHEV- 523 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~----e~gk~f~ViV~ESRP~~EG~~L-a~eL~~~GI~vT~I~Ds-----Av~~~M~~V- 523 (658)
..+++|-|.+.++..+++.+. +.|. .+|++.+ +.+.+... ...+...|+.+..+... -+..+-+.+
T Consensus 81 ~~v~~~~g~t~al~~~~~~l~~~~~~~gd-~~Vl~~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~ 157 (400)
T 3vax_A 81 DELIFTSGATESNNIALLGLAPYGERTGR-RHIITSA--IEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLR 157 (400)
T ss_dssp GGEEEESCHHHHHHHHHHTTHHHHHHHTC-CEEEEET--TSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCC
T ss_pred CcEEEeCCHHHHHHHHHHHHHHhhccCCC-CEEEECc--cccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcC
Confidence 357788777777766665543 3343 1566653 33434332 24455689998888632 122222211
Q ss_pred --cEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 524 --TRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 524 --d~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
.++|+=..--...|.+.. --.|+-+|++|++.+++
T Consensus 158 ~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~ 194 (400)
T 3vax_A 158 PDTLLVSLMHVNNETGVIQP---VAELAQQLRATPTYLHV 194 (400)
T ss_dssp TTEEEEECCSBCTTTCBBCC---HHHHHHHHTTSSCEEEE
T ss_pred CCceEEEEECCCCCceeeCc---HHHHHHHHHhcCCEEEE
Confidence 233322222222344433 25677789999987776
No 90
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=53.57 E-value=1.8e+02 Score=30.25 Aligned_cols=108 Identities=13% Similarity=0.036 Sum_probs=67.6
Q ss_pred HHHHHHHhccCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCC---------CCCc---------hHHHHHHHHHhC-
Q 006152 444 IVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDS---------RPKH---------EGKLLLRRLVRK- 504 (658)
Q Consensus 444 Ia~~a~~~I~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ES---------RP~~---------EG~~La~eL~~~- 504 (658)
++..+.+.+. +..||..|.+.+=..++..+...|.. ++.++|. |-.+ --..++..|.+.
T Consensus 26 ~G~~~q~~L~-~~~VlivG~GGlG~~ia~~La~~Gvg-~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~ln 103 (346)
T 1y8q_A 26 WGLEAQKRLR-ASRVLLVGLKGLGAEIAKNLILAGVK-GLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLN 103 (346)
T ss_dssp HCHHHHHHHH-TCEEEEECCSHHHHHHHHHHHHHTCS-EEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTC
T ss_pred hCHHHHHHHh-CCeEEEECCCHHHHHHHHHHHHcCCC-EEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHC
Confidence 5667777776 47888888876644566666666754 3333332 2111 123344677764
Q ss_pred -CCcEEEEcchH---HHHHhhhccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEee
Q 006152 505 -GLSCTYTHINA---ISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVC 562 (658)
Q Consensus 505 -GI~vT~I~DsA---v~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~ 562 (658)
++.++.+...- ...++...|.||.+.|.+ ---+.+.-.|+.+++||+.+
T Consensus 104 p~v~v~~~~~~~~~~~~~~~~~~dvVv~~~d~~---------~~r~~ln~~~~~~~ip~i~~ 156 (346)
T 1y8q_A 104 PMVDVKVDTEDIEKKPESFFTQFDAVCLTCCSR---------DVIVKVDQICHKNSIKFFTG 156 (346)
T ss_dssp TTSEEEEECSCGGGCCHHHHTTCSEEEEESCCH---------HHHHHHHHHHHHTTCEEEEE
T ss_pred CCeEEEEEecccCcchHHHhcCCCEEEEcCCCH---------HHHHHHHHHHHHcCCCEEEE
Confidence 57777775432 345677899998876543 22345777889999999875
No 91
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=53.52 E-value=39 Score=34.52 Aligned_cols=111 Identities=9% Similarity=0.101 Sum_probs=63.1
Q ss_pred CCCEEEeeCChHHHHHHH-HHHHHc-CCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc----hHHHHHhhhccEEE
Q 006152 454 DGDVLLTYGSSSAVEMIL-QHAHEL-GKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI----NAISYIIHEVTRVF 527 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL-~~A~e~-gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D----sAv~~~M~~Vd~Vl 527 (658)
.|.+||..|.+.-+..-| +.+.++ |. .+|+++...+ .....+..+|...++.+. +.| ..+..++..+|.||
T Consensus 20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~-~~V~~~~r~~-~~~~~~~~~~~~~~v~~~-~~Dl~d~~~l~~~~~~~D~Vi 96 (344)
T 2gn4_A 20 DNQTILITGGTGSFGKCFVRKVLDTTNA-KKIIVYSRDE-LKQSEMAMEFNDPRMRFF-IGDVRDLERLNYALEGVDICI 96 (344)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCCC-SEEEEEESCH-HHHHHHHHHHCCTTEEEE-ECCTTCHHHHHHHTTTCSEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhhCCC-CEEEEEECCh-hhHHHHHHHhcCCCEEEE-ECCCCCHHHHHHHHhcCCEEE
Confidence 467888888765544433 344444 42 2666665432 222334444543444332 233 45667777888887
Q ss_pred EcceeEec--------CCCeecccchHHHHHHHhhCCCCeEeeccccc
Q 006152 528 LGASSVLS--------NGTVCSRVGTACVAMVAYGFHIPVLVCCEAYK 567 (658)
Q Consensus 528 vGAdaV~a--------NG~VvNKiGT~~lAl~Ak~~~VPVyV~aetyK 567 (658)
--|-.... .---.|-.||..++-+|+.+++.-+|...+.+
T Consensus 97 h~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~ 144 (344)
T 2gn4_A 97 HAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDK 144 (344)
T ss_dssp ECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGG
T ss_pred ECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCc
Confidence 65532110 00113668999999999999998777766543
No 92
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=53.32 E-value=44 Score=32.25 Aligned_cols=37 Identities=19% Similarity=-0.029 Sum_probs=30.3
Q ss_pred hHHHHHHHHHh--CCCcEEEEcchHHHHHhhhccEEEEc
Q 006152 493 EGKLLLRRLVR--KGLSCTYTHINAISYIIHEVTRVFLG 529 (658)
Q Consensus 493 EG~~La~eL~~--~GI~vT~I~DsAv~~~M~~Vd~VlvG 529 (658)
+=.++++.+.+ .|+++..|+++.-+.+-+.+|.+|.-
T Consensus 121 ~~i~~~~~ak~~~~Ga~vI~IT~~~~s~La~~aD~~l~~ 159 (220)
T 3etn_A 121 EIVELTQLAHNLNPGLKFIVITGNPDSPLASESDVCLST 159 (220)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHSSEEEEC
T ss_pred HHHHHHHHHHhcCCCCeEEEEECCCCChhHHhCCEEEEc
Confidence 34455688888 99999999998888888889998873
No 93
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=53.30 E-value=48 Score=33.30 Aligned_cols=97 Identities=16% Similarity=0.167 Sum_probs=56.8
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEc-c-hHHHHHhh-hccEEEEcc
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTH-I-NAISYIIH-EVTRVFLGA 530 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~-D-sAv~~~M~-~Vd~VlvGA 530 (658)
...+++|.|.+.++..+++.+.+.| -+|++.+ |.+.|.... +...|+.+..+. | ..+-..+. ++..|++ .
T Consensus 89 ~~~v~~~~g~~~a~~~~~~~~~~~g--d~vl~~~--p~~~~~~~~--~~~~g~~~~~v~~d~~~l~~~l~~~~~~v~~-~ 161 (370)
T 2z61_A 89 PDNIIITGGSSLGLFFALSSIIDDG--DEVLIQN--PCYPCYKNF--IRFLGAKPVFCDFTVESLEEALSDKTKAIII-N 161 (370)
T ss_dssp GGGEEEESSHHHHHHHHHHHHCCTT--CEEEEES--SCCTHHHHH--HHHTTCEEEEECSSHHHHHHHCCSSEEEEEE-E
T ss_pred hhhEEECCChHHHHHHHHHHhcCCC--CEEEEeC--CCchhHHHH--HHHcCCEEEEeCCCHHHHHHhcccCceEEEE-c
Confidence 3468888888888877666554333 3566554 566664433 455788888875 2 22223332 3444544 2
Q ss_pred eeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 531 SSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 531 daV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
.---..|.++..- |+-+|++|++.+++
T Consensus 162 ~p~nptG~~~~~~----l~~~~~~~~~~li~ 188 (370)
T 2z61_A 162 SPSNPLGEVIDRE----IYEFAYENIPYIIS 188 (370)
T ss_dssp SSCTTTCCCCCHH----HHHHHHHHCSEEEE
T ss_pred CCCCCcCcccCHH----HHHHHHHcCCEEEE
Confidence 2212346666554 77788999987665
No 94
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=53.19 E-value=97 Score=31.32 Aligned_cols=101 Identities=15% Similarity=0.222 Sum_probs=52.7
Q ss_pred CCEEEeeCChHHHHHHHHHHH-HcCCeeEEEEeCCCCCchHHHHH-HHHHh-CCCcEEEEcch---------HHHHHhh-
Q 006152 455 GDVLLTYGSSSAVEMILQHAH-ELGKQFRVVIVDSRPKHEGKLLL-RRLVR-KGLSCTYTHIN---------AISYIIH- 521 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~-e~gk~f~ViV~ESRP~~EG~~La-~eL~~-~GI~vT~I~Ds---------Av~~~M~- 521 (658)
..+++|-|.+.++..++.... ..++.-+|++.+ |.+.+.... ..|.+ .|+.+.++... .+-..+.
T Consensus 87 ~~v~~~~g~t~al~~~~~~l~~~~~~gd~vi~~~--~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~~ 164 (406)
T 3cai_A 87 GGVVLGADRAVLLSLLAEASSSRAGLGYEVIVSR--LDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISK 164 (406)
T ss_dssp GGEEEESCHHHHHHHHHHHTGGGGBTTCEEEEET--TSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCCT
T ss_pred CeEEEeCChHHHHHHHHHHHhhccCCCCEEEEcC--CccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhCC
Confidence 467777777777755444331 112233566643 555543322 33333 58888877532 2333333
Q ss_pred hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 522 EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 522 ~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
++..|++ ...-...|.+.. --.|+-+|+.|++.++|
T Consensus 165 ~~~~v~~-~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 200 (406)
T 3cai_A 165 STRLVAV-NSASGTLGGVTD---LRAMTKLVHDVGALVVV 200 (406)
T ss_dssp TEEEEEE-ESBCTTTCBBCC---CHHHHHHHHHTTCEEEE
T ss_pred CceEEEE-eCCcCCccccCC---HHHHHHHHHHcCCEEEE
Confidence 3333333 222223355544 25677888999987765
No 95
>2oas_A ATOA, 4-hydroxybutyrate coenzyme A transferase; alpha beta protein, structural genomics, PSI-2, protein STRU initiative; HET: COA; 2.40A {Shewanella oneidensis}
Probab=53.16 E-value=17 Score=39.61 Aligned_cols=97 Identities=12% Similarity=0.128 Sum_probs=58.3
Q ss_pred HHHHHhccCCCEEEeeCChHHHHHHHHHHHHc---CCeeEEEEeCC-C----------------CCchHHHHHHHHHhCC
Q 006152 446 KHAVTKIRDGDVLLTYGSSSAVEMILQHAHEL---GKQFRVVIVDS-R----------------PKHEGKLLLRRLVRKG 505 (658)
Q Consensus 446 ~~a~~~I~dgdvILT~g~SsaV~~vL~~A~e~---gk~f~ViV~ES-R----------------P~~EG~~La~eL~~~G 505 (658)
+.|+++|+||++|...|+...-..++....++ -+.++++..-+ . +++-|-.+.+...+-+
T Consensus 10 eeAv~~IkdG~tI~~ggf~g~P~~Li~AL~~r~~~~kdLtl~~~~s~g~~~~~~~~l~~~i~~~~~~~~~~lr~~i~~G~ 89 (436)
T 2oas_A 10 LEAVSLIRSGETLWTHSMGATPKVLLDALAKHALTLDNITLLQLHTEGAESLSHPSLLGHLRHRCFFGGVPTRPLLQSGD 89 (436)
T ss_dssp HHHHTTCCTTCEEEECCBTTCCHHHHHHHHHHGGGCCSEEEEESSBSSCGGGGSGGGTTTEEEEESSCCTTTHHHHHTTS
T ss_pred HHHHhhCCCCCEEEECCccCcHHHHHHHHHHhhccCCCEEEEEecccCChhhhHHHhcCcEEEeecCCCHHHHHHHHcCC
Confidence 45667899999999988753222333333333 26788876321 1 1222223333444444
Q ss_pred CcEEEEcchHHHHHhh----hccEEEEcceeEecCCCeecc
Q 006152 506 LSCTYTHINAISYIIH----EVTRVFLGASSVLSNGTVCSR 542 (658)
Q Consensus 506 I~vT~I~DsAv~~~M~----~Vd~VlvGAdaV~aNG~VvNK 542 (658)
+.++-+..+.+..++. .+|..|+.|...-.+|.+.-.
T Consensus 90 ~~y~P~~ls~~~~~l~~~~l~~DVAlI~as~aD~~Gn~s~~ 130 (436)
T 2oas_A 90 ADYVPIFLSEVPKLFRSGEQKIDTAIIQVSPPDKHGMCSLG 130 (436)
T ss_dssp SEECCCCGGGHHHHHHTTSSCCSEEEEEECCCCTTCEEECT
T ss_pred CeeeCCccccHHHHHHcCCCCCCEEEEEeccCCCCceEEEe
Confidence 5555445555655554 589999999999999987643
No 96
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=52.64 E-value=45 Score=33.68 Aligned_cols=105 Identities=16% Similarity=0.085 Sum_probs=59.2
Q ss_pred ccCC-CEEEeeCChHHHHHHHHHHHHcCC---eeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch---------HHHH
Q 006152 452 IRDG-DVLLTYGSSSAVEMILQHAHELGK---QFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN---------AISY 518 (658)
Q Consensus 452 I~dg-dvILT~g~SsaV~~vL~~A~e~gk---~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds---------Av~~ 518 (658)
+... .+++|.|.+.++..+++.+.+.|. +-+|++. .|.+.+... .+...|+.+..+... .+-.
T Consensus 88 ~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~--~p~~~~~~~--~~~~~g~~~~~v~~~~~g~~~d~~~l~~ 163 (396)
T 3jtx_A 88 VDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSP--NPFYQIYEG--ATLLGGGEIHFANCPAPSFNPDWRSISE 163 (396)
T ss_dssp CCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEE--ESCCHHHHH--HHHHTTCEEEEEECCTTTCCCCGGGSCH
T ss_pred CCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEc--CCCcHhHHH--HHHHcCCEEEEeecCCCCCccCHHHHHH
Confidence 3345 788888888888766666544332 1355553 466666543 345578888777521 2222
Q ss_pred Hh-hhccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 519 II-HEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 519 ~M-~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
.+ +++..|++- .--...|.++..---..++-+|++|++.+++
T Consensus 164 ~~~~~~~~v~l~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 206 (396)
T 3jtx_A 164 EVWKRTKLVFVC-SPNNPSGSVLDLDGWKEVFDLQDKYGFIIAS 206 (396)
T ss_dssp HHHHTEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHCCEEEE
T ss_pred hhccCcEEEEEE-CCCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 23 245555542 2222234444444444477788999987775
No 97
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=52.58 E-value=83 Score=33.76 Aligned_cols=97 Identities=14% Similarity=0.092 Sum_probs=54.6
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHH-HH-HHHhCCCcEEEEcc---hHHHHHhhh-c-cEEEE
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLL-LR-RLVRKGLSCTYTHI---NAISYIIHE-V-TRVFL 528 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~L-a~-eL~~~GI~vT~I~D---sAv~~~M~~-V-d~Vlv 528 (658)
+.|++-+.+.++..+|....+.| -+|++.+ |.+.|..- .. .+...|+.++++.. ..+-..+.. . ..|++
T Consensus 131 ~~v~~~sG~~Ai~~al~~l~~~G--d~Vi~~~--~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~~tv~lV~l 206 (445)
T 1qgn_A 131 STLLMASGMCASTVMLLALVPAG--GHIVTTT--DCYRKTRIFIETILPKMGITATVIDPADVGALELALNQKKVNLFFT 206 (445)
T ss_dssp EEEEESCHHHHHHHHHHHHSCSS--CEEEEET--TSCHHHHHHHHHTGGGGTCEEEEECSSCHHHHHHHHHHSCEEEEEE
T ss_pred cEEEeCCHHHHHHHHHHHHhCCC--CEEEEcC--CCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhccCCCCEEEE
Confidence 44555444456655555444334 4666655 66666432 22 35678999999863 234444443 3 44544
Q ss_pred cceeEe-cCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 529 GASSVL-SNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 529 GAdaV~-aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
+.+. ..|.+. . --.|+-+|++|+++|+|
T Consensus 207 --e~p~NptG~v~-d--l~~I~~la~~~g~~liv 235 (445)
T 1qgn_A 207 --ESPTNPFLRCV-D--IELVSKLCHEKGALVCI 235 (445)
T ss_dssp --ESSCTTTCCCC-C--HHHHHHHHHHTTCEEEE
T ss_pred --eCCCCCCCccc-C--HHHHHHHHHHcCCEEEE
Confidence 2222 224333 2 24678889999998776
No 98
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=52.49 E-value=53 Score=27.96 Aligned_cols=90 Identities=11% Similarity=0.122 Sum_probs=48.0
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHh-CCCcEEEEcchH-HHHH----hhhccEEEE
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVR-KGLSCTYTHINA-ISYI----IHEVTRVFL 528 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~-~GI~vT~I~DsA-v~~~----M~~Vd~Vlv 528 (658)
+..|+..|.+..=..+...+.+.| .+|+++|..+. .+..|.+ .|+.+.. .|.. ...+ +.++|.||+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g--~~v~~~d~~~~-----~~~~~~~~~~~~~~~-~d~~~~~~l~~~~~~~~d~vi~ 75 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKG--HDIVLIDIDKD-----ICKKASAEIDALVIN-GDCTKIKTLEDAGIEDADMYIA 75 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHH-----HHHHHHHHCSSEEEE-SCTTSHHHHHHTTTTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CeEEEEECCHH-----HHHHHHHhcCcEEEE-cCCCCHHHHHHcCcccCCEEEE
Confidence 356888898765444455555555 56777775432 2334443 3765432 2221 1111 457888888
Q ss_pred cceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 529 GASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 529 GAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
-...- -.| ..++.+|+.++..-+|
T Consensus 76 ~~~~~-----~~~----~~~~~~~~~~~~~~ii 99 (140)
T 1lss_A 76 VTGKE-----EVN----LMSSLLAKSYGINKTI 99 (140)
T ss_dssp CCSCH-----HHH----HHHHHHHHHTTCCCEE
T ss_pred eeCCc-----hHH----HHHHHHHHHcCCCEEE
Confidence 75321 111 3456678888765333
No 99
>2hj0_A Putative citrate lyase, ALFA subunit; alpha beta protein., structural genomics, PSI-2, protein STR initiative; HET: CIT; 2.70A {Streptococcus mutans}
Probab=52.39 E-value=67 Score=35.76 Aligned_cols=115 Identities=19% Similarity=0.269 Sum_probs=68.1
Q ss_pred HHHHh--ccCCCEEEeeCCh----HHHHHHHHHHHHcC-CeeEEEEeCCCCCchHH------------------HHHHHH
Q 006152 447 HAVTK--IRDGDVLLTYGSS----SAVEMILQHAHELG-KQFRVVIVDSRPKHEGK------------------LLLRRL 501 (658)
Q Consensus 447 ~a~~~--I~dgdvILT~g~S----saV~~vL~~A~e~g-k~f~ViV~ESRP~~EG~------------------~La~eL 501 (658)
.|+++ |+||++|...|+. .++..++....+++ +.++++.....+...|. ...+++
T Consensus 54 EAv~~~~IkdG~tV~~gGf~g~P~~l~~~Li~AL~~r~~kdLtli~~s~g~~~~~l~~~~~~g~v~r~~~~~~g~~~r~~ 133 (519)
T 2hj0_A 54 EAIEKTRLKDGMTISFHHHFREGDYVMNMVLDEIAKMGIKDISIAPSSIANVHEPLIDHIKNGVVTNITSSGLRDKVGAA 133 (519)
T ss_dssp HHHHHTTCCTTCEEEECCTTGGGBCHHHHHHHHHHHTTCCSEEEEESCCCGGGTTHHHHHHTTSEEEEEESBCHHHHHHH
T ss_pred HHHhcCCCCCCCEEEECCccCCchHHHHHHHHHHHhcCCCCeEEEeecCCCcchhHHhHhhcCcEEEEEecCCCcHHHHH
Confidence 45557 9999999999875 23445555555544 45777764322221110 112344
Q ss_pred HhCCC---cEEEEcchHHHHHhh----hccEEEEcceeEecCCCeec---cc--chHHHHHHHhhCCCCeEe
Q 006152 502 VRKGL---SCTYTHINAISYIIH----EVTRVFLGASSVLSNGTVCS---RV--GTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 502 ~~~GI---~vT~I~DsAv~~~M~----~Vd~VlvGAdaV~aNG~VvN---Ki--GT~~lAl~Ak~~~VPVyV 561 (658)
.+.|- |+.|-......+++. .+|..|+.|...-.+|.+.- +. |+...+.++.....-|++
T Consensus 134 i~~G~~~~P~~l~~~gG~~~ll~~~~l~~DVAlI~as~aD~~Gnls~~~g~s~~~s~~~~~~~a~~A~~VIa 205 (519)
T 2hj0_A 134 ISEGIMENPVIIRSHGGRARAIATDDIHIDVAFLGAPSSDAYGNANGTRGKTTCGSLGYAMIDAKYADQVVI 205 (519)
T ss_dssp HHTTCCSSCEEECCHHHHHHHHHHTSSCCSEEEEEESEECTTSCEESSSSSSCCSCCHHHHHHHHHCSEEEE
T ss_pred HHCCCCCCCceeeccCCHHHHHhcCCCCCcEEEEEecccCCCCcEEEecCccccccchhhHHHHhhCCEEEE
Confidence 45553 555433233677775 58999999999999999873 32 344555555555554444
No 100
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=52.30 E-value=1.8e+02 Score=28.39 Aligned_cols=98 Identities=11% Similarity=0.037 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHH----HHHHHhCCCcEEEEcc---hHHHHHhh-----hccEEEEccee
Q 006152 465 SAVEMILQHAHELGKQFRVVIVDSRPKHEGKLL----LRRLVRKGLSCTYTHI---NAISYIIH-----EVTRVFLGASS 532 (658)
Q Consensus 465 saV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~L----a~eL~~~GI~vT~I~D---sAv~~~M~-----~Vd~VlvGAda 532 (658)
.++...+.-|...+..+.++.+.. | .+..+. ...+...|++++.... +....++. .+|.|++|...
T Consensus 22 ~al~~A~~la~~~~a~l~ll~v~~-~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~a~~~~~dliV~G~~~ 99 (290)
T 3mt0_A 22 LALKRAQLIAGVTQSHLHLLVCEK-R-RDHSAALNDLAQELREEGYSVSTNQAWKDSLHQTIIAEQQAEGCGLIIKQHFP 99 (290)
T ss_dssp HHHHHHHHHHHHHCCEEEEEEECS-S-SCCHHHHHHHHHHHHHTTCCEEEEEECSSSHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHHHHHHHhcCCeEEEEEeeC-c-HHHHHHHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhcCCCEEEEeccc
Confidence 456666666777777777665433 3 333332 3556678999877542 23333333 58999999975
Q ss_pred EecCCCeec-ccchHHHHHHHhhCCCCeEeecccccc
Q 006152 533 VLSNGTVCS-RVGTACVAMVAYGFHIPVLVCCEAYKF 568 (658)
Q Consensus 533 V~aNG~VvN-KiGT~~lAl~Ak~~~VPVyV~aetyKf 568 (658)
- |.+-. -.|+..-.+ .++.++||+|+-+...+
T Consensus 100 ~---~~~~~~~~gs~~~~v-l~~~~~PVlvv~~~~~~ 132 (290)
T 3mt0_A 100 D---NPLKKAILTPDDWKL-LRFAPCPVLMTKTARPW 132 (290)
T ss_dssp S---CTTSTTSCCHHHHHH-HHHCSSCEEEECCCSCS
T ss_pred C---CchhhcccCHHHHHH-HhcCCCCEEEecCCCCC
Confidence 2 22222 256655544 56788999999755544
No 101
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=52.13 E-value=1.1e+02 Score=30.22 Aligned_cols=97 Identities=21% Similarity=0.214 Sum_probs=55.8
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEc--ch--------HHHHHhh----
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTH--IN--------AISYIIH---- 521 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~--Ds--------Av~~~M~---- 521 (658)
.+++|.|.+.++..++..+.+ ..-+|++. .|.+.|...+ +...|+.+..+. .. .+-..+.
T Consensus 71 ~v~~~~g~t~a~~~~~~~~~~--~gd~vl~~--~~~~~~~~~~--~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 144 (371)
T 2e7j_A 71 VARVTNGAREAKFAVMHSLAK--KDAWVVMD--ENCHYSSYVA--AERAGLNIALVPKTDYPDYAITPENFAQTIEETKK 144 (371)
T ss_dssp EEEEESSHHHHHHHHHHHHCC--TTCEEEEE--TTCCHHHHHH--HHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTT
T ss_pred EEEEeCChHHHHHHHHHHHhC--CCCEEEEc--cCcchHHHHH--HHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcc
Confidence 566666667777666665543 33456654 3556665444 566899888886 22 3333443
Q ss_pred --hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEee
Q 006152 522 --EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVC 562 (658)
Q Consensus 522 --~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~ 562 (658)
++..|++ ..--...|.+.. + -.|+-+|++|++.+++=
T Consensus 145 ~~~~~~v~~-~~~~nptG~~~~-~--~~i~~~~~~~~~~li~D 183 (371)
T 2e7j_A 145 RGEVVLALI-TYPDGNYGNLPD-V--KKIAKVCSEYDVPLLVN 183 (371)
T ss_dssp TSCEEEEEE-ESSCTTTCCCCC-H--HHHHHHHHTTTCCEEEE
T ss_pred cCCeEEEEE-ECCCCCCcccCC-H--HHHHHHHHHcCCeEEEE
Confidence 2223322 222223455544 2 67778899999988763
No 102
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=52.03 E-value=45 Score=33.01 Aligned_cols=96 Identities=10% Similarity=0.116 Sum_probs=55.7
Q ss_pred EEEeeCChHHHH-HHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc---hHHHHHhhhccEEEEccee
Q 006152 457 VLLTYGSSSAVE-MILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI---NAISYIIHEVTRVFLGASS 532 (658)
Q Consensus 457 vILT~g~SsaV~-~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D---sAv~~~M~~Vd~VlvGAda 532 (658)
+||..|-+..+. .+++.+.++| ++|+++.-.+. +-.....+|...|+.+..... ..+..+++.+|.||.-|
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~-~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a-- 87 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKLG--HPTYVFTRPNS-SKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISAL-- 87 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTT--CCEEEEECTTC-SCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECC--
T ss_pred eEEEECCCchHHHHHHHHHHHCC--CcEEEEECCCC-chhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECC--
Confidence 577777643322 2234444556 45665543332 223334566777877644321 35566677777666543
Q ss_pred EecCCCeecccchHHHHHHHhhCC-CCeEee
Q 006152 533 VLSNGTVCSRVGTACVAMVAYGFH-IPVLVC 562 (658)
Q Consensus 533 V~aNG~VvNKiGT~~lAl~Ak~~~-VPVyV~ 562 (658)
+..+-.++..+.-+|+..+ +..+|.
T Consensus 88 -----~~~~~~~~~~l~~aa~~~g~v~~~v~ 113 (318)
T 2r6j_A 88 -----AFPQILDQFKILEAIKVAGNIKRFLP 113 (318)
T ss_dssp -----CGGGSTTHHHHHHHHHHHCCCCEEEC
T ss_pred -----chhhhHHHHHHHHHHHhcCCCCEEEe
Confidence 2334567888888888887 888774
No 103
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=51.96 E-value=65 Score=32.65 Aligned_cols=101 Identities=11% Similarity=0.056 Sum_probs=55.1
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc-----------hHHHHHhh-
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI-----------NAISYIIH- 521 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D-----------sAv~~~M~- 521 (658)
...+++|.|.+.++..+++.+.+.| -+|++ ..|.+.|...+ +...|+.+..+.. ..+-..+.
T Consensus 89 ~~~v~~t~g~~~a~~~~~~~l~~~g--d~vl~--~~p~~~~~~~~--~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~ 162 (399)
T 1c7n_A 89 TDWIINTAGVVPAVFNAVREFTKPG--DGVII--ITPVYYPFFMA--IKNQERKIIECELLEKDGYYTIDFQKLEKLSKD 162 (399)
T ss_dssp GGGEEEESSHHHHHHHHHHHHCCTT--CEEEE--CSSCCTHHHHH--HHTTTCEEEECCCEEETTEEECCHHHHHHHHTC
T ss_pred hhhEEEcCCHHHHHHHHHHHhcCCC--CEEEE--cCCCcHhHHHH--HHHcCCEEEecccccCCCCEEEcHHHHHHHhcc
Confidence 3467888887778866666553333 35555 34777665433 3456776655532 22333333
Q ss_pred -hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 522 -EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 522 -~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
++..|++ ..--...|.++..-=--.|+-+|++|++.+++
T Consensus 163 ~~~~~v~~-~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 202 (399)
T 1c7n_A 163 KNNKALLF-CSPHNPVGRVWKKDELQKIKDIVLKSDLMLWS 202 (399)
T ss_dssp TTEEEEEE-ESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEE
T ss_pred CCCcEEEE-cCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEE
Confidence 3445544 22222234444332234566788999998776
No 104
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=51.80 E-value=45 Score=34.21 Aligned_cols=100 Identities=12% Similarity=0.130 Sum_probs=54.7
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchH-------HHHHhh----hc
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINA-------ISYIIH----EV 523 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsA-------v~~~M~----~V 523 (658)
..+++|.|.+.++..++..+...| -+|++.+ |.+.|.... +...|+.+..+.... +..+-+ ++
T Consensus 100 ~~v~~t~g~~~a~~~~~~~~~~~g--d~Vl~~~--p~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~ 173 (412)
T 2x5d_A 100 SEAIVTIGSKEGLAHLMLATLDHG--DTILVPN--PSYPIHIYG--AVIAGAQVRSVPLVPGIDFFNELERAIRESIPKP 173 (412)
T ss_dssp TSEEEESCHHHHHHHHHHHHCCTT--CEEEEEE--SCCHHHHHH--HHHHTCEEEEEECSTTSCHHHHHHHHHHTEESCC
T ss_pred cCEEEcCChHHHHHHHHHHhCCCC--CEEEEcC--CCchhHHHH--HHHcCCEEEEeecCCccCCCCCHHHHHHhcccCc
Confidence 478888888888876666553333 3566654 666665443 334688877775321 122222 34
Q ss_pred cEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 524 TRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 524 d~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
..|++ ..--...|.++..----.|+-+|+.|++.+++
T Consensus 174 ~~v~l-~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 210 (412)
T 2x5d_A 174 RMMIL-GFPSNPTAQCVELDFFERVVALAKQYDVMVVH 210 (412)
T ss_dssp SEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred eEEEE-CCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 45555 22211224333321124467788999987775
No 105
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=51.67 E-value=1.1e+02 Score=30.43 Aligned_cols=101 Identities=9% Similarity=0.016 Sum_probs=55.9
Q ss_pred CCEEEeeCChHHHHHHHHHHHHc-CCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc---------hHHHHHhh--h
Q 006152 455 GDVLLTYGSSSAVEMILQHAHEL-GKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI---------NAISYIIH--E 522 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~-gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D---------sAv~~~M~--~ 522 (658)
..+++|.|.+.++..++..+... +..-+|++.++ |.+.+ .+...+...|+.+..+.. ..+-..+. +
T Consensus 60 ~~v~~~~g~t~al~~~~~~~~~~~~~gd~vlv~~~-~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~ 137 (385)
T 2bkw_A 60 QPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVST-GTFSD-RFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNS 137 (385)
T ss_dssp EEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECS-SHHHH-HHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSC
T ss_pred ceEEEcCchHHHHHHHHHHHhccCCCCCeEEEEcC-CcchH-HHHHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcCC
Confidence 45778888888886666655310 22336777654 33322 223445667988887753 23333443 3
Q ss_pred ccEEEEcceeEecCCCeecccchHHHHHHHhhC--CCCeEe
Q 006152 523 VTRVFLGASSVLSNGTVCSRVGTACVAMVAYGF--HIPVLV 561 (658)
Q Consensus 523 Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~--~VPVyV 561 (658)
+..|++- .--...|.+.. --.|+-+|++| ++.+++
T Consensus 138 ~~~v~~~-~~~nptG~~~~---l~~i~~~~~~~~~~~~li~ 174 (385)
T 2bkw_A 138 YGAVTVT-HVDTSTAVLSD---LKAISQAIKQTSPETFFVV 174 (385)
T ss_dssp CSEEEEE-SEETTTTEECC---HHHHHHHHHHHCTTSEEEE
T ss_pred CCEEEEE-ccCCCcCeEcC---HHHHHHHHHhhCCCCEEEE
Confidence 4555542 22223355443 24677788888 887665
No 106
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=51.62 E-value=70 Score=32.32 Aligned_cols=101 Identities=15% Similarity=0.110 Sum_probs=54.7
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc-----------hHHHHHhh-
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI-----------NAISYIIH- 521 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D-----------sAv~~~M~- 521 (658)
...+++|.|.+.++..+++.+.+.| -+|++. .|.+.|...+ +...|..+..+.. ..+-..+.
T Consensus 87 ~~~v~~t~g~~~al~~~~~~l~~~g--d~vl~~--~p~y~~~~~~--~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~ 160 (390)
T 1d2f_A 87 SQTVVYGPSVIYMVSELIRQWSETG--EGVVIH--TPAYDAFYKA--IEGNQRTVMPVALEKQADGWFCDMGKLEAVLAK 160 (390)
T ss_dssp GGGEEEESCHHHHHHHHHHHSSCTT--CEEEEE--ESCCHHHHHH--HHHTTCEEEEEECEECSSSEECCHHHHHHHHTS
T ss_pred HHHEEEcCCHHHHHHHHHHHhcCCC--CEEEEc--CCCcHHHHHH--HHHCCCEEEEeecccCCCccccCHHHHHHHhcc
Confidence 3467888887778866666543333 355553 3666664433 3456877766542 12333333
Q ss_pred -hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 522 -EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 522 -~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
++..|++- .--...|.++..-=--.|+-+|++|++.+++
T Consensus 161 ~~~~~v~l~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 200 (390)
T 1d2f_A 161 PECKIMLLC-SPQNPTGKVWTCDELEIMADLCERHGVRVIS 200 (390)
T ss_dssp TTEEEEEEE-SSCTTTCCCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEEe-CCCCCCCcCcCHHHHHHHHHHHHHcCCEEEE
Confidence 34455442 2211234444332123566788999998776
No 107
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=51.59 E-value=23 Score=34.93 Aligned_cols=74 Identities=22% Similarity=0.280 Sum_probs=46.3
Q ss_pred EEEeeCChHHHHHHHHHHHHcCC-eeEEEEeC-CCCCchHHHHHHHHHhCCCcEEEEc-----chHHHHHhh--hccEEE
Q 006152 457 VLLTYGSSSAVEMILQHAHELGK-QFRVVIVD-SRPKHEGKLLLRRLVRKGLSCTYTH-----INAISYIIH--EVTRVF 527 (658)
Q Consensus 457 vILT~g~SsaV~~vL~~A~e~gk-~f~ViV~E-SRP~~EG~~La~eL~~~GI~vT~I~-----DsAv~~~M~--~Vd~Vl 527 (658)
.||.-|.++.++.+|.. .+.+. ..+|..+= .+|...|.+. ..+.|||+.++. +..+...++ ++|.++
T Consensus 12 ~vl~SG~gsnl~all~~-~~~~~~~~~I~~Vis~~~~a~~l~~---A~~~gIp~~~~~~~~~~~~~~~~~L~~~~~Dliv 87 (215)
T 3kcq_A 12 GVLISGRGSNLEALAKA-FSTEESSVVISCVISNNAEARGLLI---AQSYGIPTFVVKRKPLDIEHISTVLREHDVDLVC 87 (215)
T ss_dssp EEEESSCCHHHHHHHHH-TCCC-CSEEEEEEEESCTTCTHHHH---HHHTTCCEEECCBTTBCHHHHHHHHHHTTCSEEE
T ss_pred EEEEECCcHHHHHHHHH-HHcCCCCcEEEEEEeCCcchHHHHH---HHHcCCCEEEeCcccCChHHHHHHHHHhCCCEEE
Confidence 57888999998776654 44443 35554333 3777777543 346799998864 244555555 588888
Q ss_pred Ecce-eEe
Q 006152 528 LGAS-SVL 534 (658)
Q Consensus 528 vGAd-aV~ 534 (658)
+-+- .|+
T Consensus 88 lagy~~IL 95 (215)
T 3kcq_A 88 LAGFMSIL 95 (215)
T ss_dssp ESSCCSCC
T ss_pred EeCCceEe
Confidence 7543 444
No 108
>2nvv_A Acetyl-COA hydrolase/transferase family protein; alpha beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Porphyromonas gingivalis}
Probab=51.27 E-value=47 Score=36.84 Aligned_cols=96 Identities=17% Similarity=0.221 Sum_probs=57.3
Q ss_pred HHHHHhccCCCEEEeeCCh------HHHHHHHHHHHH---cCC--eeEEEEe-CCCC-----------------CchHHH
Q 006152 446 KHAVTKIRDGDVLLTYGSS------SAVEMILQHAHE---LGK--QFRVVIV-DSRP-----------------KHEGKL 496 (658)
Q Consensus 446 ~~a~~~I~dgdvILT~g~S------saV~~vL~~A~e---~gk--~f~ViV~-ESRP-----------------~~EG~~ 496 (658)
+.|+.+|+||++|...|+. .++..+.+.+.+ .|. +++++.. -..| ++.|..
T Consensus 9 eEAv~~IkdGdtV~~gGf~~~G~P~~Li~AL~~r~~~~~~~g~~~~Ltl~~~~s~g~~~~~~l~~~g~v~~~~~~~~~~~ 88 (506)
T 2nvv_A 9 EEAAEFVHHNDNVGFSGFTPAGNPKVVPAAIAKRAIAAHEKGNPFKIGMFTGASTGARLDGVLAQADAVKFRTPYQSNKD 88 (506)
T ss_dssp HHHHTTCCTTCEEEECCSSSTTCCCSHHHHHHHHHHHHHTTTCCCCEEEECSSCCCTTTHHHHHHTTCEEEEESCCCCHH
T ss_pred HHHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHhHHhhccccCCceEEEEEecCCCcchhHHhccCCceEEEeeeCCCHH
Confidence 3566789999999999874 345554555443 333 4555542 1222 222333
Q ss_pred HHHHHHhCC-CcEEEEcchHHHHHhh-----hccEEEEcceeEecCCCeecc
Q 006152 497 LLRRLVRKG-LSCTYTHINAISYIIH-----EVTRVFLGASSVLSNGTVCSR 542 (658)
Q Consensus 497 La~eL~~~G-I~vT~I~DsAv~~~M~-----~Vd~VlvGAdaV~aNG~VvNK 542 (658)
.+++.+.| ++++-+..+.+..++. ++|..|+-|...-.+|.+.-.
T Consensus 89 -~r~~i~~G~i~~~P~~ls~v~~~l~~~~l~~~DVAlI~as~aDe~Gnls~~ 139 (506)
T 2nvv_A 89 -LRNLINNGSTSYFDLHLSTLAQDLRYGFYGKVDVAIIEVADVTEDGKILPT 139 (506)
T ss_dssp -HHHHHHTTSSEECCCCGGGHHHHHHTTSSCCCCEEEEEESEECTTSEEECC
T ss_pred -HHHHHHcCCCeEeCCCcccHHHHHHcCCcCCCCEEEEEecccCCCceEEEe
Confidence 23444445 4444444455655554 489999999999999987654
No 109
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=51.24 E-value=64 Score=32.33 Aligned_cols=98 Identities=15% Similarity=0.167 Sum_probs=53.8
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchH------HHHHhh----hcc
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINA------ISYIIH----EVT 524 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsA------v~~~M~----~Vd 524 (658)
..+++|.|.+.++..+++.+ .| -+|++.+ |.+.|... .+...|..+..+.... +..++. ++.
T Consensus 77 ~~v~~~~g~~~al~~~~~~~--~g--d~vl~~~--p~y~~~~~--~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~~~~~ 148 (364)
T 1lc5_A 77 SWILAGNGETESIFTVASGL--KP--RRAMIVT--PGFAEYGR--ALAQSGCEIRRWSLREADGWQLTDAILEALTPDLD 148 (364)
T ss_dssp GGEEEESSHHHHHHHHHHHH--CC--SEEEEEE--SCCTHHHH--HHHHTTCEEEEEECCGGGTTCCCTTHHHHCCTTCC
T ss_pred HHEEECCCHHHHHHHHHHHc--CC--CeEEEeC--CCcHHHHH--HHHHcCCeEEEEeCCcccccchhHHHHHhccCCCC
Confidence 46788888888886666555 45 3565543 66666443 3445688887775321 111222 344
Q ss_pred EEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 525 RVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 525 ~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
.|++ .+--...|.++..-=--.++-+|++|++.+++
T Consensus 149 ~v~i-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 184 (364)
T 1lc5_A 149 CLFL-CTPNNPTGLLPERPLLQAIADRCKSLNINLIL 184 (364)
T ss_dssp EEEE-ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEE-eCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEE
Confidence 4544 22212234443322124566688899988776
No 110
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=51.24 E-value=31 Score=30.85 Aligned_cols=61 Identities=16% Similarity=0.152 Sum_probs=35.3
Q ss_pred HHHhCCCcEEE---Ecc-hH---HHHHhh--hccEEEEcceeEecCCCeec-ccchHHHHHHHhhCCCCeEeecc
Q 006152 500 RLVRKGLSCTY---THI-NA---ISYIIH--EVTRVFLGASSVLSNGTVCS-RVGTACVAMVAYGFHIPVLVCCE 564 (658)
Q Consensus 500 eL~~~GI~vT~---I~D-sA---v~~~M~--~Vd~VlvGAdaV~aNG~VvN-KiGT~~lAl~Ak~~~VPVyV~ae 564 (658)
.|...|++++. +.. +. +..+.+ ++|+||+|++.- +.+-. -.|+..-- +.++.++||+|+-+
T Consensus 86 ~~~~~g~~~~~~~~~~~g~~~~~I~~~a~~~~~DlIV~G~~g~---~~~~~~~~Gsv~~~-vl~~~~~PVlvv~~ 156 (170)
T 2dum_A 86 EVKRAFRAKNVRTIIRFGIPWDEIVKVAEEENVSLIILPSRGK---LSLSHEFLGSTVMR-VLRKTKKPVLIIKE 156 (170)
T ss_dssp HHHHHTTCSEEEEEEEEECHHHHHHHHHHHTTCSEEEEESCCC---CC--TTCCCHHHHH-HHHHCSSCEEEECC
T ss_pred HHHHcCCceeeeeEEecCChHHHHHHHHHHcCCCEEEECCCCC---CccccceechHHHH-HHHhCCCCEEEEcc
Confidence 34456888765 322 22 222333 799999999853 22322 24654444 45567899999843
No 111
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=51.05 E-value=79 Score=30.33 Aligned_cols=84 Identities=23% Similarity=0.196 Sum_probs=45.6
Q ss_pred HHHHHcCCeeEEEEeCCCCCc---hHHHHHHHHHhCCCcEEEE--cchHHHHHhh---hccEEEEcceeEecCCCeeccc
Q 006152 472 QHAHELGKQFRVVIVDSRPKH---EGKLLLRRLVRKGLSCTYT--HINAISYIIH---EVTRVFLGASSVLSNGTVCSRV 543 (658)
Q Consensus 472 ~~A~e~gk~f~ViV~ESRP~~---EG~~La~eL~~~GI~vT~I--~DsAv~~~M~---~Vd~VlvGAdaV~aNG~VvNKi 543 (658)
..|...+-.++|+-+...+.. .-.++...|.+.|+++++. ..+..-.++. +.|.+++|+ .+ .+- -.
T Consensus 176 ~la~~~~a~l~ll~v~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~a~~~dliV~G~-~~--~~~---~~ 249 (268)
T 3ab8_A 176 PLARALGLGVRVVSVHEDPARAEAWALEAEAYLRDHGVEASALVLGGDAADHLLRLQGPGDLLALGA-PV--RRL---VF 249 (268)
T ss_dssp HHHHHHTCCEEEEEECSSHHHHHHHHHHHHHHHHHTTCCEEEEEECSCHHHHHHHHCCTTEEEEEEC-CC--SCC---SS
T ss_pred HhhhcCCCEEEEEEEcCcHHHHHHHHHHHHHHHHHcCCceEEEEeCCChHHHHHHHHHhCCEEEECC-cc--ccc---Ee
Confidence 334344666766654432211 1123446678889988764 2333333333 449999999 11 111 23
Q ss_pred chHHHHHHHhhCCCCeEee
Q 006152 544 GTACVAMVAYGFHIPVLVC 562 (658)
Q Consensus 544 GT~~lAl~Ak~~~VPVyV~ 562 (658)
|+..-.+ .++-.+||+|+
T Consensus 250 Gs~~~~v-l~~~~~pvlvv 267 (268)
T 3ab8_A 250 GSTAERV-IRNAQGPVLTA 267 (268)
T ss_dssp CCHHHHH-HHHCSSCEEEE
T ss_pred ccHHHHH-HhcCCCCEEEe
Confidence 5544444 45668999986
No 112
>2g39_A Acetyl-COA hydrolase; coenzyme A transferase, structural G PSI, protein structure initiative, midwest center for struc genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: c.124.1.2 c.124.1.2
Probab=50.62 E-value=61 Score=35.87 Aligned_cols=95 Identities=13% Similarity=0.160 Sum_probs=54.8
Q ss_pred HHHHHhccCCCEEEeeCCh------HHHHHHHHHHHHcCCeeEEEEe-CCCCCc-----------------hHHHHHHHH
Q 006152 446 KHAVTKIRDGDVLLTYGSS------SAVEMILQHAHELGKQFRVVIV-DSRPKH-----------------EGKLLLRRL 501 (658)
Q Consensus 446 ~~a~~~I~dgdvILT~g~S------saV~~vL~~A~e~gk~f~ViV~-ESRP~~-----------------EG~~La~eL 501 (658)
+.|+.+|+||++|...|+. .++..+.+.+.+.+.+++++.. ...|.. .|.. .+++
T Consensus 19 eEAv~~IkdGdtV~~gGf~~~G~P~~Li~AL~~r~~~~dl~Ltl~~~~~~g~~~~~~l~~~g~v~~~~~~~~~~~-~r~~ 97 (497)
T 2g39_A 19 AEAADLIQDGMTVGMSGFTRAGEAKAVPQALAMRAKERPLRISLMTGASLGNDLDKQLTEAGVLARRMPFQVDST-LRKA 97 (497)
T ss_dssp HHHHTTCCTTCEEEECCBTTBSCCCHHHHHHHHHHHHSCCCEEEECSSCCCTTHHHHHHHTTCEEEEESCCCCHH-HHHH
T ss_pred HHHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHhhhcCCceEEEEecccccccchHHHhcCCceEEEEeeCCCHH-HHHH
Confidence 3556789999999999874 3454444443322222445431 223332 2222 2344
Q ss_pred HhCCCcEEEEc--chHHHHHhh-----hccEEEEcceeEecCCCeecc
Q 006152 502 VRKGLSCTYTH--INAISYIIH-----EVTRVFLGASSVLSNGTVCSR 542 (658)
Q Consensus 502 ~~~GI~vT~I~--DsAv~~~M~-----~Vd~VlvGAdaV~aNG~VvNK 542 (658)
.+.|- ++|++ .+.+..++. ++|..|+-|...-.+|.+.-.
T Consensus 98 i~~G~-v~fvP~~ls~~~~~l~~~~l~~~DVAlI~as~aDe~Gnls~~ 144 (497)
T 2g39_A 98 INAGE-VMFIDQHLSETVEQLRNHQLKLPDIAVIEAAAITEQGHIVPT 144 (497)
T ss_dssp HHTTS-SEECCCCTTTHHHHHHTTSSCCCSEEEEEESEECTTSCEECC
T ss_pred HHcCC-CeEECCccccHHHHHHcCCcCCCCEEEEEecccCCCceEEEe
Confidence 45553 34433 344444443 489999999999999987654
No 113
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=50.61 E-value=1e+02 Score=31.11 Aligned_cols=104 Identities=14% Similarity=0.054 Sum_probs=52.8
Q ss_pred CCCEEE--eeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc---h-------HHHHHhh
Q 006152 454 DGDVLL--TYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI---N-------AISYIIH 521 (658)
Q Consensus 454 dgdvIL--T~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D---s-------Av~~~M~ 521 (658)
...+++ |.|.+.++..+++.+..-...-+|++. .|.+.|.... +...|+.+..+.. . .+-..+.
T Consensus 92 ~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~--~p~y~~~~~~--~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 167 (396)
T 2q7w_A 92 DKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVS--NPSWPNHKSV--FNSAGLEVREYAYYDAENHTLDFDALINSLN 167 (396)
T ss_dssp TTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEE--ESCCTHHHHH--HHHTTCEEEEEECEETTTTEECHHHHHHHHT
T ss_pred cccEEEEecccchhhHHHHHHHHHHhCCCCEEEEc--CCCchhHHHH--HHHcCCceEEEecccCCCCCcCHHHHHHHHH
Confidence 445666 777777776655443321222356654 3666665433 3446887776643 1 2333333
Q ss_pred h---ccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 522 E---VTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 522 ~---Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
+ -+++++=..--...|.++..-=--.++-+|++|++.+++
T Consensus 168 ~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 210 (396)
T 2q7w_A 168 EAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLF 210 (396)
T ss_dssp TCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred hCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 2 134443222222234433322223477788889987765
No 114
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=50.46 E-value=68 Score=33.15 Aligned_cols=102 Identities=14% Similarity=0.169 Sum_probs=53.7
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc-------hHHHHHhh-----
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI-------NAISYIIH----- 521 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D-------sAv~~~M~----- 521 (658)
...+++|.|.+.++..+++.+.+.| -+|++.+ |.+.|... .+...|+.+..+.. ..+-..+.
T Consensus 109 ~~~v~~t~G~~~al~~~~~~l~~~g--d~Vl~~~--p~y~~~~~--~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~ 182 (425)
T 1vp4_A 109 EDNLIFTVGSQQALDLIGKLFLDDE--SYCVLDD--PAYLGAIN--AFRQYLANFVVVPLEDDGMDLNVLERKLSEFDKN 182 (425)
T ss_dssp GGGEEEEEHHHHHHHHHHHHHCCTT--CEEEEEE--SCCHHHHH--HHHTTTCEEEEEEEETTEECHHHHHHHHHHHHHT
T ss_pred cccEEEeccHHHHHHHHHHHhCCCC--CEEEEeC--CCcHHHHH--HHHHcCCEEEEeccCCCCCCHHHHHHHHHhhhhc
Confidence 3468888888888866666543333 3555543 56666433 34457877766642 23333333
Q ss_pred ----hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 522 ----EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 522 ----~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
++..|++=..--...|.++..-=--.|+-+|++|++.+++
T Consensus 183 ~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~ 226 (425)
T 1vp4_A 183 GKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVE 226 (425)
T ss_dssp TCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred ccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 2334332111111224443321123577788999987775
No 115
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=50.37 E-value=1e+02 Score=30.93 Aligned_cols=99 Identities=14% Similarity=0.064 Sum_probs=57.9
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc--------hHHHHHhh---hc
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI--------NAISYIIH---EV 523 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D--------sAv~~~M~---~V 523 (658)
..+++|.|.+.++..+++.+.+.| -+|++.+ |.+-|..+...+...|+.+.++.. ..+-..++ ++
T Consensus 60 ~~v~~t~g~t~a~~~~~~~~~~~g--d~Vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~ 135 (392)
T 2z9v_A 60 KPVILHGEPVLGLEAAAASLISPD--DVVLNLA--SGVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEI 135 (392)
T ss_dssp CCEEESSCTHHHHHHHHHHHCCTT--CCEEEEE--SSHHHHHHHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTC
T ss_pred CEEEEeCCchHHHHHHHHHhcCCC--CEEEEec--CCcccHHHHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCC
Confidence 567888888888876666554333 3566654 445454333444557888877752 23344442 44
Q ss_pred cEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 524 TRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 524 d~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
..|++ ..--...|.+.. --.|+-+|++|++.+++
T Consensus 136 ~~v~~-~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 169 (392)
T 2z9v_A 136 TVVSV-CHHDTPSGTINP---IDAIGALVSAHGAYLIV 169 (392)
T ss_dssp CEEEE-ESEEGGGTEECC---HHHHHHHHHHTTCEEEE
T ss_pred cEEEE-eccCCCCceecc---HHHHHHHHHHcCCeEEE
Confidence 45544 232333355544 34677789999987766
No 116
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=50.37 E-value=1.6e+02 Score=29.81 Aligned_cols=55 Identities=16% Similarity=-0.012 Sum_probs=38.1
Q ss_pred hHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEE---cceeEecCCCeecccchHHHH
Q 006152 493 EGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFL---GASSVLSNGTVCSRVGTACVA 549 (658)
Q Consensus 493 EG~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~Vlv---GAdaV~aNG~VvNKiGT~~lA 549 (658)
+=..+++.+.+.|+++..|+++.-+.+-+.+|.+|. |.+.+ .|....+.||.++.
T Consensus 155 ~vi~al~~Ak~~Ga~~IaIT~~~~S~La~~AD~~I~~~~g~E~~--~~st~~~s~ta~~~ 212 (306)
T 1nri_A 155 YVIAGLQYAKSLGALTISIASNPKSEMAEIADIAIETIVGPEIL--TGSSRLKSGTAQKM 212 (306)
T ss_dssp HHHHHHHHHHHHTCEEEEEESSTTCHHHHHSSEEEECCCCSCSS--TTCTTTHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCChHHHhCCEEEEcCCCCccc--cCcccchhHHHHHH
Confidence 345556888889999999999887888888998885 33322 34444566775543
No 117
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=50.34 E-value=55 Score=33.29 Aligned_cols=101 Identities=13% Similarity=0.202 Sum_probs=53.2
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc-------hHHHHHhh-----
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI-------NAISYIIH----- 521 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D-------sAv~~~M~----- 521 (658)
...+++|.|.+.++..++..+.+.| -+|++.+ |.+.|.. ..+...|+.+..+.. ..+-..+.
T Consensus 98 ~~~v~~t~g~t~a~~~~~~~~~~~g--d~vl~~~--p~~~~~~--~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~ 171 (407)
T 2zc0_A 98 PENIVITIGGTGALDLLGRVLIDPG--DVVITEN--PSYINTL--LAFEQLGAKIEGVPVDNDGMRVDLLEEKIKELKAK 171 (407)
T ss_dssp GGGEEEESHHHHHHHHHHHHHCCTT--CEEEEEE--SCCHHHH--HHHHTTTCEEEEEEEETTEECHHHHHHHHHHHHHT
T ss_pred cceEEEecCHHHHHHHHHHHhcCCC--CEEEEeC--CChHHHH--HHHHHcCCEEEEcccCCCCCCHHHHHHHHHhhhcc
Confidence 3467788777778866666554333 3566544 6666643 344567887776642 23333443
Q ss_pred --hccEEEEcceeEecCCCeecccch-HHHHHHHhhCCCCeEe
Q 006152 522 --EVTRVFLGASSVLSNGTVCSRVGT-ACVAMVAYGFHIPVLV 561 (658)
Q Consensus 522 --~Vd~VlvGAdaV~aNG~VvNKiGT-~~lAl~Ak~~~VPVyV 561 (658)
++..|++=...-...|.++. ... -.|+-+|++|++.+++
T Consensus 172 ~~~~~~v~~~~~~~nptG~~~~-~~~l~~i~~~~~~~~~~li~ 213 (407)
T 2zc0_A 172 GQKVKLIYTIPTGQNPMGVTMS-MERRKALLEIASKYDLLIIE 213 (407)
T ss_dssp TCCEEEEEECCSSCTTTCCCCC-HHHHHHHHHHHHHHTCEEEE
T ss_pred cCCceEEEECCCCCCCCCcCCC-HHHHHHHHHHHHHcCCEEEE
Confidence 23333221111111233222 111 2677788999988776
No 118
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=50.33 E-value=55 Score=32.34 Aligned_cols=98 Identities=8% Similarity=0.090 Sum_probs=55.3
Q ss_pred CEEEeeCChHHHH-HHHHHHHHcCCeeEEEEeCCCC-C---chHHHHHHHHHhCCCcEEEEc--c-hHHHHHhhhccEEE
Q 006152 456 DVLLTYGSSSAVE-MILQHAHELGKQFRVVIVDSRP-K---HEGKLLLRRLVRKGLSCTYTH--I-NAISYIIHEVTRVF 527 (658)
Q Consensus 456 dvILT~g~SsaV~-~vL~~A~e~gk~f~ViV~ESRP-~---~EG~~La~eL~~~GI~vT~I~--D-sAv~~~M~~Vd~Vl 527 (658)
.+||..|-+.-+. .+++.+.++| ++|+++.-++ . .+..+.+..|...|+.+.... | ..+..+++.+|.||
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi 82 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASLSFS--HPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVI 82 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTT--CCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred cEEEEEcCCchhHHHHHHHHHhCC--CcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEE
Confidence 4577777643322 2234444556 4566654433 1 122333445667787654432 2 34566677766665
Q ss_pred EcceeEecCCCeecccchHHHHHHHhhCC-CCeEee
Q 006152 528 LGASSVLSNGTVCSRVGTACVAMVAYGFH-IPVLVC 562 (658)
Q Consensus 528 vGAdaV~aNG~VvNKiGT~~lAl~Ak~~~-VPVyV~ 562 (658)
.-| +...-.++..+.-+|+..+ ++-+|.
T Consensus 83 ~~a-------~~~~~~~~~~l~~aa~~~g~v~~~v~ 111 (321)
T 3c1o_A 83 SAL-------PFPMISSQIHIINAIKAAGNIKRFLP 111 (321)
T ss_dssp ECC-------CGGGSGGGHHHHHHHHHHCCCCEEEC
T ss_pred ECC-------CccchhhHHHHHHHHHHhCCccEEec
Confidence 433 3334677888888888888 888773
No 119
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=50.23 E-value=1.6e+02 Score=27.26 Aligned_cols=36 Identities=0% Similarity=-0.306 Sum_probs=29.4
Q ss_pred HHHHHHHHHhCCCcEEEEcchHHHHHhhh---ccEEEEc
Q 006152 494 GKLLLRRLVRKGLSCTYTHINAISYIIHE---VTRVFLG 529 (658)
Q Consensus 494 G~~La~eL~~~GI~vT~I~DsAv~~~M~~---Vd~VlvG 529 (658)
=.++++.+.+.|+++..|+++.-+.+.+. +|.+|.-
T Consensus 129 ~i~~~~~ak~~g~~vI~IT~~~~s~La~~~~~ad~~l~~ 167 (199)
T 1x92_A 129 VIQAIQAAHDREMLVVALTGRDGGGMASLLLPEDVEIRV 167 (199)
T ss_dssp HHHHHHHHHHTTCEEEEEECTTCHHHHHHCCTTCEEEEC
T ss_pred HHHHHHHHHHCCCEEEEEECCCCCcHHhccccCCEEEEe
Confidence 34566888999999999999887777777 9988764
No 120
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=50.08 E-value=44 Score=35.86 Aligned_cols=99 Identities=17% Similarity=0.160 Sum_probs=56.4
Q ss_pred EEeeCChHHHHHHHHHHHHcCC------eeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch--------HHHHHhhhc
Q 006152 458 LLTYGSSSAVEMILQHAHELGK------QFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN--------AISYIIHEV 523 (658)
Q Consensus 458 ILT~g~SsaV~~vL~~A~e~gk------~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds--------Av~~~M~~V 523 (658)
++|.|.+.++..+|+.+.+.|. +-+|++. .|.+.+.. ..+...|+.+..+... ++-..+.+-
T Consensus 164 ~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~--~~~~~~~~--~~~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~ 239 (514)
T 3mad_A 164 TVTSGGTESLLLAMKTYRDWARATKGITAPEAVVP--VSAHAAFD--KAAQYFGIKLVRTPLDADYRADVAAMREAITPN 239 (514)
T ss_dssp EEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEE--TTSCTHHH--HHHHHHTCEEEEECBCTTSCBCHHHHHHHCCTT
T ss_pred EEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEe--CccchHHH--HHHHHcCCeeEEeeeCCCCCCCHHHHHHHhccC
Confidence 8888877788777776655431 1466664 35555532 3344458888888632 333333322
Q ss_pred cEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEeec
Q 006152 524 TRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCC 563 (658)
Q Consensus 524 d~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~a 563 (658)
.++|+...--...|.+.. --.|+-+|++|+++++|=+
T Consensus 240 ~~~v~~~~~~nptG~~~~---l~~i~~la~~~~i~livDe 276 (514)
T 3mad_A 240 TVVVAGSAPGYPHGVVDP---IPEIAALAAEHGIGCHVDA 276 (514)
T ss_dssp EEEEEEETTCTTTCCCCC---HHHHHHHHHHHTCEEEEEC
T ss_pred CEEEEEeCCCCCCccccC---HHHHHHHHHHhCCeEEEec
Confidence 333333322222354443 2567788999999988743
No 121
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=49.94 E-value=1.1e+02 Score=30.09 Aligned_cols=109 Identities=13% Similarity=0.130 Sum_probs=67.7
Q ss_pred HHHHHHHhccCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCC---------CCC---------chHHHHHHHHHhC-
Q 006152 444 IVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDS---------RPK---------HEGKLLLRRLVRK- 504 (658)
Q Consensus 444 Ia~~a~~~I~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ES---------RP~---------~EG~~La~eL~~~- 504 (658)
++..+.+.+. +..||..|.+.+=..++..+...|.. ++.++|. |-. .....++.+|.+.
T Consensus 18 ~g~~~q~~l~-~~~VlvvG~GglG~~va~~La~~Gvg-~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n 95 (251)
T 1zud_1 18 IALDGQQKLL-DSQVLIIGLGGLGTPAALYLAGAGVG-TLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLN 95 (251)
T ss_dssp THHHHHHHHH-TCEEEEECCSTTHHHHHHHHHHTTCS-EEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHC
T ss_pred cCHHHHHHHh-cCcEEEEccCHHHHHHHHHHHHcCCC-eEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHC
Confidence 5666667776 47888888865443455666666754 3444432 221 1223445666653
Q ss_pred -CCcEEEEc----chHHHHHhhhccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEeec
Q 006152 505 -GLSCTYTH----INAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCC 563 (658)
Q Consensus 505 -GI~vT~I~----DsAv~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~a 563 (658)
++.++.+. +..+..++++.|.||...|... --+.+.-.|+.+++|++.+.
T Consensus 96 p~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~---------~r~~l~~~~~~~~~p~i~~~ 150 (251)
T 1zud_1 96 PDIQLTALQQRLTGEALKDAVARADVVLDCTDNMA---------TRQEINAACVALNTPLITAS 150 (251)
T ss_dssp TTSEEEEECSCCCHHHHHHHHHHCSEEEECCSSHH---------HHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEEeccCCHHHHHHHHhcCCEEEECCCCHH---------HHHHHHHHHHHhCCCEEEEe
Confidence 56776654 2345667889999988766432 23567778888999987654
No 122
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=49.83 E-value=29 Score=34.78 Aligned_cols=110 Identities=10% Similarity=0.090 Sum_probs=63.5
Q ss_pred CCCEEEeeCChHHHHHH-HHHHHHcCCeeEEEEeCCCCCchHHHHHHHHH-hCCCcEEEE-cc----hHHHHHhhh--cc
Q 006152 454 DGDVLLTYGSSSAVEMI-LQHAHELGKQFRVVIVDSRPKHEGKLLLRRLV-RKGLSCTYT-HI----NAISYIIHE--VT 524 (658)
Q Consensus 454 dgdvILT~g~SsaV~~v-L~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~-~~GI~vT~I-~D----sAv~~~M~~--Vd 524 (658)
.+.+||..|-+.-|..- ++.+.++|..++|++.+..+..........+. ..+ ++++ .| ..+..++.. +|
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~Dl~d~~~~~~~~~~~~~d 100 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPN--YYFVKGEIQNGELLEHVIKERDVQ 100 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTT--EEEEECCTTCHHHHHHHHHHHTCC
T ss_pred CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCC--eEEEEcCCCCHHHHHHHHhhcCCC
Confidence 45678888876555443 34556678789999887554222111111111 123 3333 22 456667776 88
Q ss_pred EEEEcceeEecCCC--------eecccchHHHHHHHhhCCCCeEeeccc
Q 006152 525 RVFLGASSVLSNGT--------VCSRVGTACVAMVAYGFHIPVLVCCEA 565 (658)
Q Consensus 525 ~VlvGAdaV~aNG~--------VvNKiGT~~lAl~Ak~~~VPVyV~aet 565 (658)
.||--|-....+.. -.|-.||..+.-+|+.++++-+|.+.+
T Consensus 101 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 149 (346)
T 4egb_A 101 VIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVST 149 (346)
T ss_dssp EEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred EEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 88876543321111 357789999999999999985554443
No 123
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=49.80 E-value=95 Score=28.27 Aligned_cols=38 Identities=13% Similarity=-0.059 Sum_probs=31.3
Q ss_pred hHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEcc
Q 006152 493 EGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGA 530 (658)
Q Consensus 493 EG~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~VlvGA 530 (658)
+-.++++.+.+.|+++..|+++.-+.+.+.+|.+|.-.
T Consensus 111 ~~~~~~~~ak~~g~~vi~IT~~~~s~la~~ad~~l~~~ 148 (183)
T 2xhz_A 111 EITALIPVLKRLHVPLICITGRPESSMARAADVHLCVK 148 (183)
T ss_dssp HHHHHHHHHHTTTCCEEEEESCTTSHHHHHSSEEEECC
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCChhHHhCCEEEEeC
Confidence 44566788899999999999988888888899887644
No 124
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=49.67 E-value=1.3e+02 Score=29.25 Aligned_cols=104 Identities=20% Similarity=0.344 Sum_probs=56.6
Q ss_pred EEEeeCChH----HHHHHHHHHHHcCCeeEEEEeCCCCC-ch-HHHHHHHHHhCCCcEEEE--cchHHHHHhh-----hc
Q 006152 457 VLLTYGSSS----AVEMILQHAHELGKQFRVVIVDSRPK-HE-GKLLLRRLVRKGLSCTYT--HINAISYIIH-----EV 523 (658)
Q Consensus 457 vILT~g~Ss----aV~~vL~~A~e~gk~f~ViV~ESRP~-~E-G~~La~eL~~~GI~vT~I--~DsAv~~~M~-----~V 523 (658)
+++-+..|. ++...+..|...+..++|+-+...+. .+ -.++...|.+.|+++.+. ..+....++. ++
T Consensus 173 Ilv~~d~s~~s~~al~~a~~la~~~~~~l~ll~v~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~g~~~~~I~~~a~~~~~ 252 (294)
T 3loq_A 173 VLVAYDFSKWADRALEYAKFVVKKTGGELHIIHVSEDGDKTADLRVMEEVIGAEGIEVHVHIESGTPHKAILAKREEINA 252 (294)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHTCEEEEEEECSSSCCHHHHHHHHHHHHHTTCCEEEEEECSCHHHHHHHHHHHTTC
T ss_pred EEEEECCCHHHHHHHHHHHHHhhhcCCEEEEEEEccCchHHHHHHHHHHHHHHcCCcEEEEEecCCHHHHHHHHHHhcCc
Confidence 344445553 34444444444566777665543332 11 223446788899986544 3333333333 68
Q ss_pred cEEEEcceeEecCCCeecc-cchHHHHHHHhhCCCCeEeecc
Q 006152 524 TRVFLGASSVLSNGTVCSR-VGTACVAMVAYGFHIPVLVCCE 564 (658)
Q Consensus 524 d~VlvGAdaV~aNG~VvNK-iGT~~lAl~Ak~~~VPVyV~ae 564 (658)
|.+++|+.. .|.+-.. .|+..-. +.++-.+||+|+=+
T Consensus 253 dLlV~G~~~---~~~~~~~~~Gs~~~~-vl~~~~~pvLvv~~ 290 (294)
T 3loq_A 253 TTIFMGSRG---AGSVMTMILGSTSES-VIRRSPVPVFVCKR 290 (294)
T ss_dssp SEEEEECCC---CSCHHHHHHHCHHHH-HHHHCSSCEEEECS
T ss_pred CEEEEeCCC---CCCccceeeCcHHHH-HHhcCCCCEEEECC
Confidence 999999974 2222221 3443333 45677899999844
No 125
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=49.57 E-value=70 Score=32.94 Aligned_cols=88 Identities=16% Similarity=0.185 Sum_probs=56.6
Q ss_pred cCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHh-CCCcEEEEcchHHHHHhhhccEEEEcce
Q 006152 453 RDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVR-KGLSCTYTHINAISYIIHEVTRVFLGAS 531 (658)
Q Consensus 453 ~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~-~GI~vT~I~DsAv~~~M~~Vd~VlvGAd 531 (658)
.+..+|+.+|.+..-...++...+.....+|+|.+-. .-.+++.+|.+ .|++++.. .+..++.++|.|+.-.-
T Consensus 119 ~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~---~a~~la~~l~~~~g~~~~~~---~~~eav~~aDIVi~aT~ 192 (313)
T 3hdj_A 119 PRSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY---ASPEILERIGRRCGVPARMA---APADIAAQADIVVTATR 192 (313)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT---CCHHHHHHHHHHHTSCEEEC---CHHHHHHHCSEEEECCC
T ss_pred CCCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc---HHHHHHHHHHHhcCCeEEEe---CHHHHHhhCCEEEEccC
Confidence 3567899999987655555544443334467776655 45567777764 48887665 34566789999986431
Q ss_pred --------eEecCCCeecccchH
Q 006152 532 --------SVLSNGTVCSRVGTA 546 (658)
Q Consensus 532 --------aV~aNG~VvNKiGT~ 546 (658)
..+..|..++-+|++
T Consensus 193 s~~pvl~~~~l~~G~~V~~vGs~ 215 (313)
T 3hdj_A 193 STTPLFAGQALRAGAFVGAIGSS 215 (313)
T ss_dssp CSSCSSCGGGCCTTCEEEECCCS
T ss_pred CCCcccCHHHcCCCcEEEECCCC
Confidence 124456677777765
No 126
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=49.49 E-value=37 Score=36.42 Aligned_cols=92 Identities=18% Similarity=0.234 Sum_probs=54.3
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHhhh-ccEEEEccee
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHE-VTRVFLGASS 532 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M~~-Vd~VlvGAda 532 (658)
.|..|+.+|-+.+=..+-+.++++| ++|.+.|.++..+. .++..|.+.||++.+-.+.. .++.. +|.||++.-
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G--~~V~~~D~~~~~~~-~~~~~L~~~gi~~~~g~~~~--~~~~~~~d~vv~spg- 81 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLG--AIVTVNDGKPFDEN-PTAQSLLEEGIKVVCGSHPL--ELLDEDFCYMIKNPG- 81 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTT--CEEEEEESSCGGGC-HHHHHHHHTTCEEEESCCCG--GGGGSCEEEEEECTT-
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCC--CEEEEEeCCcccCC-hHHHHHHhCCCEEEECCChH--HhhcCCCCEEEECCc-
Confidence 3678888877543223334445444 78888999875432 34578999999887544422 23445 788876532
Q ss_pred EecCCCeecccchHHHHHHHhhCCCCeE
Q 006152 533 VLSNGTVCSRVGTACVAMVAYGFHIPVL 560 (658)
Q Consensus 533 V~aNG~VvNKiGT~~lAl~Ak~~~VPVy 560 (658)
|-. +...-..|++.|+||+
T Consensus 82 i~~---------~~p~~~~a~~~gi~v~ 100 (451)
T 3lk7_A 82 IPY---------NNPMVKKALEKQIPVL 100 (451)
T ss_dssp SCT---------TSHHHHHHHHTTCCEE
T ss_pred CCC---------CChhHHHHHHCCCcEE
Confidence 111 1234455666677765
No 127
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=49.44 E-value=14 Score=37.89 Aligned_cols=106 Identities=19% Similarity=0.172 Sum_probs=69.4
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEcceeEe
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASSVL 534 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~VlvGAdaV~ 534 (658)
-|+++.+-....+..++.+|.+.|.+.-|++.+.-|..+-.++...+.+.|+ .++-.|+++.+-+...+..+-...+.
T Consensus 72 ~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi--~viGPNc~Gii~~~~~~~~~~~~~~~ 149 (297)
T 2yv2_A 72 INTSIVFVPAPFAPDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYARQKGA--TIIGPNCPGAITPGQAKVGIMPGHIF 149 (297)
T ss_dssp CCEEEECCCGGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTC--EEECSSSCEEEETTTEEEESCCGGGC
T ss_pred CCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCC--EEEcCCCCeeEcccccceeecccCCC
Confidence 4777777777777788999998887766666776665555666677777777 46656666555444333322222233
Q ss_pred cCC--CeecccchHHHHHH--HhhCCCCeEee
Q 006152 535 SNG--TVCSRVGTACVAMV--AYGFHIPVLVC 562 (658)
Q Consensus 535 aNG--~VvNKiGT~~lAl~--Ak~~~VPVyV~ 562 (658)
.-| +++++.||+..+++ +...++.|--+
T Consensus 150 ~~G~va~vSqSG~l~~~~~~~~~~~g~G~s~~ 181 (297)
T 2yv2_A 150 KEGGVAVVSRSGTLTYEISYMLTRQGIGQSTV 181 (297)
T ss_dssp CEEEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCCCeeEE
Confidence 334 57899999987775 45577777533
No 128
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=49.42 E-value=64 Score=33.22 Aligned_cols=98 Identities=14% Similarity=0.092 Sum_probs=53.3
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHH-HHHHH-HHhCCCcEEEEcchHHHHH---hh-hccEEEEc
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGK-LLLRR-LVRKGLSCTYTHINAISYI---IH-EVTRVFLG 529 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~-~La~e-L~~~GI~vT~I~DsAv~~~---M~-~Vd~VlvG 529 (658)
+.|++-+.+.++..++..+.+.| -+|++.+ |.+.|. ..... +...|+.+.++...-+..+ +. ++..|++
T Consensus 76 ~~i~~~sG~~ai~~~~~~~~~~g--d~vl~~~--~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~- 150 (389)
T 3acz_A 76 GSAAFGSGMGAISSSTLAFLQKG--DHLIAGD--TLYGCTVSLFTHWLPRFGIEVDLIDTSDVEKVKAAWKPNTKMVYL- 150 (389)
T ss_dssp EEEEESSHHHHHHHHHTTTCCTT--CEEEEES--SCCHHHHHHHHHHHHHTTCEEEEECTTCHHHHHHTCCTTEEEEEE-
T ss_pred eEEEeCCHHHHHHHHHHHHhCCC--CEEEEeC--CCchHHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCeEEEE-
Confidence 45555554455554444443333 3666654 566663 33333 5778999999864333333 32 3344444
Q ss_pred ceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 530 ASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 530 AdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
..---..|.+.. --.++-+|++|++.++|
T Consensus 151 ~~~~nptG~~~~---l~~i~~~~~~~~~~liv 179 (389)
T 3acz_A 151 ESPANPTCKVSD---IKGIAVVCHERGARLVV 179 (389)
T ss_dssp ESSCTTTCCCCC---HHHHHHHHHHHTCEEEE
T ss_pred ECCCCCCCeecC---HHHHHHHHHHcCCEEEE
Confidence 211122344443 35677789999988776
No 129
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=49.07 E-value=58 Score=34.07 Aligned_cols=97 Identities=14% Similarity=0.104 Sum_probs=54.1
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHH--HHHhCCCcEEEE-cc---hHHHHHhh-hccEEEE
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLR--RLVRKGLSCTYT-HI---NAISYIIH-EVTRVFL 528 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~--eL~~~GI~vT~I-~D---sAv~~~M~-~Vd~Vlv 528 (658)
+.|++-+.+.++..+|..+... .-+|++. .|.+.|....+ .+...|+.++++ .. ..+-..+. ++..|++
T Consensus 75 ~~v~~~sGt~A~~~~l~~~~~~--gd~vi~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~i~~~~~~v~~ 150 (421)
T 2ctz_A 75 AALATASGHAAQFLALTTLAQA--GDNIVST--PNLYGGTFNQFKVTLKRLGIEVRFTSREERPEEFLALTDEKTRAWWV 150 (421)
T ss_dssp EEEEESSHHHHHHHHHHHHCCT--TCEEEEC--SCCCHHHHHHHHTHHHHTTCEEEECCTTCCHHHHHHHCCTTEEEEEE
T ss_pred ceEEecCHHHHHHHHHHHHhCC--CCEEEEe--CCCchHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHhhccCCeEEEE
Confidence 3455444355666555554333 3456653 46666654433 256789999988 43 23333343 3334443
Q ss_pred cceeEec-CCCeecccchHHHHHHHhhCCCCeEe
Q 006152 529 GASSVLS-NGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 529 GAdaV~a-NG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
+.+.. .|.+.. --.|+-+|++|+++++|
T Consensus 151 --~~~~n~~G~~~~---l~~i~~~a~~~g~~liv 179 (421)
T 2ctz_A 151 --ESIGNPALNIPD---LEALAQAAREKGVALIV 179 (421)
T ss_dssp --ESSCTTTCCCCC---HHHHHHHHHHHTCEEEE
T ss_pred --ECCCCCCCcccC---HHHHHHHHHHcCCEEEE
Confidence 33332 344443 45678889999998876
No 130
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=49.03 E-value=56 Score=33.87 Aligned_cols=98 Identities=16% Similarity=0.162 Sum_probs=54.8
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHH-HHHH-HHhCCCcEEEEcch--HHHHHhh-hccEEEEcc
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKL-LLRR-LVRKGLSCTYTHIN--AISYIIH-EVTRVFLGA 530 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~-La~e-L~~~GI~vT~I~Ds--Av~~~M~-~Vd~VlvGA 530 (658)
++++|-|.+.++..+|..+.+.| -+|++.+ |.+.+.. .... +...|+.+.++... .+-..+. ++..|++ .
T Consensus 73 ~~~~~~~gt~a~~~al~~l~~~g--d~vi~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~i~~~~~~v~~-~ 147 (412)
T 2cb1_A 73 EAVVLASGQAATFAALLALLRPG--DEVVAAK--GLFGQTIGLFGQVLSLMGVTVRYVDPEPEAVREALSAKTRAVFV-E 147 (412)
T ss_dssp EEEEESSHHHHHHHHHHTTCCTT--CEEEEET--TCCHHHHHHHHHTTTTTTCEEEEECSSHHHHHHHCCTTEEEEEE-E
T ss_pred cEEEECCHHHHHHHHHHHHhCCC--CEEEEeC--CCchhHHHHHHHHHHHcCCEEEEECCCHHHHHHHhccCCeEEEE-e
Confidence 57777666667766665543333 4666654 5555432 2222 55689999988643 2222232 3344444 1
Q ss_pred eeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 531 SSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 531 daV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
..-...|.+.. --.|+-+|++|++.+++
T Consensus 148 ~~~n~~G~~~~---l~~i~~l~~~~~~~li~ 175 (412)
T 2cb1_A 148 TVANPALLVPD---LEALATLAEEAGVALVV 175 (412)
T ss_dssp SSCTTTCCCCC---HHHHHHHHHHHTCEEEE
T ss_pred CCCCCCccccc---HHHHHHHHHHcCCEEEE
Confidence 11122344442 45677889999998776
No 131
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=48.98 E-value=22 Score=40.70 Aligned_cols=69 Identities=13% Similarity=0.226 Sum_probs=45.6
Q ss_pred CEEEeeCChH--HHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHH-hCC--CcEEEEcchHHHHHhh-hccEEE
Q 006152 456 DVLLTYGSSS--AVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLV-RKG--LSCTYTHINAISYIIH-EVTRVF 527 (658)
Q Consensus 456 dvILT~g~Ss--aV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~-~~G--I~vT~I~DsAv~~~M~-~Vd~Vl 527 (658)
.+||..|.++ ++...|+.+.+.+++++||.+|-.|. ...+.++. +.| =.+|+|.-.+=-.-++ +||.+|
T Consensus 359 ~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~---A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIV 433 (637)
T 4gqb_A 359 QVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN---AVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIV 433 (637)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH---HHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEE
T ss_pred cEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH---HHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEE
Confidence 4789998775 56677787777889999999998764 34454443 333 3577776544333333 577765
No 132
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=48.92 E-value=14 Score=37.65 Aligned_cols=106 Identities=14% Similarity=0.155 Sum_probs=68.8
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEcceeE
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASSV 533 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~VlvGAdaV 533 (658)
+-|.++.+-....+..++.+|.+.|.+.-|++.+.-+..+-.+|.+...+.|+. ++-.|.++.+-+..-+...-...+
T Consensus 64 ~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~--liGPNc~Gi~~p~~~~~~~~~~~~ 141 (288)
T 2nu8_A 64 GATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVR--MIGPNTPGVITPGECKIGIQPGHI 141 (288)
T ss_dssp CCCEEEECCCGGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCE--EECSSCCEEEETTTEEEESSCTTS
T ss_pred CCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCE--EEecCCcceecCCcceeEecccCC
Confidence 347777777777777889999998987777777877776666777777888873 465666554444322221111122
Q ss_pred ecCC--CeecccchHHHHHH--HhhCCCCeEe
Q 006152 534 LSNG--TVCSRVGTACVAMV--AYGFHIPVLV 561 (658)
Q Consensus 534 ~aNG--~VvNKiGT~~lAl~--Ak~~~VPVyV 561 (658)
..-| +++++.||+..+++ +...++.|--
T Consensus 142 ~~~G~i~~vsqSG~l~~~~~~~~~~~g~G~s~ 173 (288)
T 2nu8_A 142 HKPGKVGIVSRSGTLTYEAVKQTTDYGFGQST 173 (288)
T ss_dssp CCEEEEEEEESCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCEEEEECcHHHHHHHHHHHHhcCCCEEE
Confidence 3334 46888999776665 5667777753
No 133
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=48.79 E-value=57 Score=34.37 Aligned_cols=97 Identities=18% Similarity=0.143 Sum_probs=53.4
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHH-H-HHHHhCCCcEEEEcchH---HHHHhh-hccEEEEc
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLL-L-RRLVRKGLSCTYTHINA---ISYIIH-EVTRVFLG 529 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~L-a-~eL~~~GI~vT~I~DsA---v~~~M~-~Vd~VlvG 529 (658)
++|+|-+.+.++..+|..+.+.| -+|++. .|.+.|... . ..+...|+.++++...- +-..+. ++..|++
T Consensus 98 ~~~~~~sG~~Ai~~al~~l~~~G--d~Vi~~--~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ai~~~t~~v~l- 172 (414)
T 3ndn_A 98 AAFATASGMAAVFTSLGALLGAG--DRLVAA--RSLFGSCFVVCSEILPRWGVQTVFVDGDDLSQWERALSVPTQAVFF- 172 (414)
T ss_dssp EEEEESSHHHHHHHHHHTTCCTT--CEEEEE--SCCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHTSSCCSEEEE-
T ss_pred cEEEECCHHHHHHHHHHHHhCCC--CEEEEc--CCccchHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCCCCeEEEE-
Confidence 44555544555655555443333 355554 355655433 3 33567899999996432 333333 4555555
Q ss_pred ceeEe-cCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 530 ASSVL-SNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 530 AdaV~-aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
+.+. ..|.+.. --.|+-+|++|+++++|
T Consensus 173 -e~p~NptG~~~~---l~~i~~la~~~g~~liv 201 (414)
T 3ndn_A 173 -ETPSNPMQSLVD---IAAVTELAHAAGAKVVL 201 (414)
T ss_dssp -ESSCTTTCCCCC---HHHHHHHHHHTTCEEEE
T ss_pred -ECCCCCCCcccc---HHHHHHHHHHcCCEEEE
Confidence 2222 2233322 34677889999998876
No 134
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=48.65 E-value=61 Score=27.28 Aligned_cols=57 Identities=14% Similarity=0.094 Sum_probs=39.1
Q ss_pred EEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCC-CCchHHHHHHHHHh------CCCcEEEEcc
Q 006152 457 VLLTYGSSSAVEMILQHAHELGKQFRVVIVDSR-PKHEGKLLLRRLVR------KGLSCTYTHI 513 (658)
Q Consensus 457 vILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESR-P~~EG~~La~eL~~------~GI~vT~I~D 513 (658)
.|.+..+.......|....+.+..+.++++|-. |...|..+++.|.+ ..+++.+++.
T Consensus 37 ~v~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~~~ii~~t~ 100 (146)
T 3ilh_A 37 EIQSVTSGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQHFQPMKNKSIVCLLSS 100 (146)
T ss_dssp EEEEESSHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHHHCGGGTTTCEEEEECS
T ss_pred eeeecCCHHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHHHHHhhhhccCCCeEEEEeC
Confidence 566666655444556555455678888888754 88899999999887 3566666654
No 135
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infec diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=48.64 E-value=14 Score=39.81 Aligned_cols=62 Identities=13% Similarity=0.190 Sum_probs=41.3
Q ss_pred chHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEeeccccc
Q 006152 492 HEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYK 567 (658)
Q Consensus 492 ~EG~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~aetyK 567 (658)
..|.++.-++. -+-..++.+|+||.|=-++ |.....----+-+|-+||.|+|||+++|.+..
T Consensus 269 ~~Gi~~v~~~~------------~l~~~l~~ADLVITGEG~~--D~Qtl~GK~p~gVa~~A~~~~vPviaiaG~~~ 330 (383)
T 3cwc_A 269 RRGIEIVTDAL------------HLEACLADADLVITGEGRI--DSQTIHGKVPIGVANIAKRYNKPVIGIAGSLT 330 (383)
T ss_dssp ECHHHHHHHHT------------THHHHHHHCSEEEECCEES--CC----CHHHHHHHHHHHHTTCCEEEEEEECC
T ss_pred ccHHHHHHHHh------------ChHhhhcCCCEEEECCCCC--cCcCCCCcHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 35777765553 2355677899999997555 22233323346678899999999999999753
No 136
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=48.56 E-value=53 Score=28.97 Aligned_cols=60 Identities=17% Similarity=0.147 Sum_probs=35.4
Q ss_pred HHHhCCCcEEEEc--chHHHHHh---h--hccEEEEcceeEecCCCeec-ccchHHHHHHHhhCCCCeEeec
Q 006152 500 RLVRKGLSCTYTH--INAISYII---H--EVTRVFLGASSVLSNGTVCS-RVGTACVAMVAYGFHIPVLVCC 563 (658)
Q Consensus 500 eL~~~GI~vT~I~--DsAv~~~M---~--~Vd~VlvGAdaV~aNG~VvN-KiGT~~lAl~Ak~~~VPVyV~a 563 (658)
.|...|++++... ......++ + ++|.|++|++.- |.+-. -.|+..-.+ .++..+||+|+=
T Consensus 91 ~~~~~g~~~~~~v~~G~~~~~I~~~a~~~~~dlIV~G~~g~---~~~~~~~~GSv~~~v-l~~~~~pVlvv~ 158 (162)
T 1mjh_A 91 ELEDVGFKVKDIIVVGIPHEEIVKIAEDEGVDIIIMGSHGK---TNLKEILLGSVTENV-IKKSNKPVLVVK 158 (162)
T ss_dssp HHHHTTCEEEEEEEEECHHHHHHHHHHHTTCSEEEEESCCS---SCCTTCSSCHHHHHH-HHHCCSCEEEEC
T ss_pred HHHHcCCceEEEEcCCCHHHHHHHHHHHcCCCEEEEcCCCC---CCccceEecchHHHH-HHhCCCCEEEEe
Confidence 3456788876442 22222232 3 799999999753 22222 256654444 455689999984
No 137
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=48.37 E-value=47 Score=32.53 Aligned_cols=108 Identities=14% Similarity=0.130 Sum_probs=60.2
Q ss_pred CCEEEeeCChHHHHHH-HHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEc--c-hHHHHHhhhccEEEEcc
Q 006152 455 GDVLLTYGSSSAVEMI-LQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTH--I-NAISYIIHEVTRVFLGA 530 (658)
Q Consensus 455 gdvILT~g~SsaV~~v-L~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~--D-sAv~~~M~~Vd~VlvGA 530 (658)
+.+||..|-+..+..- ++.+.++|. ++|+++.-.|... -+..|...|+.+.... | ..+..++..+|.||.-|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~~V~~~~R~~~~~---~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a 80 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGT-FKVRVVTRNPRKK---AAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVT 80 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCS-SEEEEEESCTTSH---HHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCC-ceEEEEEcCCCCH---HHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeC
Confidence 4578888876544433 344444452 5677665444322 1245666777654321 1 35566677888887654
Q ss_pred eeEecCCCeecccchHHHHHHHhhCCCCeEeecccc
Q 006152 531 SSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAY 566 (658)
Q Consensus 531 daV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~aety 566 (658)
...-....-.|-.|+..+.-+|+..++.-+|.+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~ 116 (299)
T 2wm3_A 81 NYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLE 116 (299)
T ss_dssp CHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred CCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcCc
Confidence 311110111233477777778888888877775543
No 138
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=48.08 E-value=41 Score=31.36 Aligned_cols=100 Identities=12% Similarity=0.021 Sum_probs=57.9
Q ss_pred CEEEeeCChHHHHHHHH-HHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEc-c----hHHHHHhhhccEEEEc
Q 006152 456 DVLLTYGSSSAVEMILQ-HAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTH-I----NAISYIIHEVTRVFLG 529 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~-~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~-D----sAv~~~M~~Vd~VlvG 529 (658)
.+||..|-+.-|...|. .+.++| .+|+++.-++...- .+ ..+ ++++. | ..+..+++++|.||--
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-----~~-~~~--~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 74 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRG--FEVTAVVRHPEKIK-----IE-NEH--LKVKKADVSSLDEVCEVCKGADAVISA 74 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTT--CEEEEECSCGGGCC-----CC-CTT--EEEECCCTTCHHHHHHHHTTCSEEEEC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC--CEEEEEEcCcccch-----hc-cCc--eEEEEecCCCHHHHHHHhcCCCEEEEe
Confidence 47888887766555444 444444 67887765543210 00 122 33332 2 3456677788888876
Q ss_pred ceeEecCCC--eecccchHHHHHHHhhCCCCeEeeccc
Q 006152 530 ASSVLSNGT--VCSRVGTACVAMVAYGFHIPVLVCCEA 565 (658)
Q Consensus 530 AdaV~aNG~--VvNKiGT~~lAl~Ak~~~VPVyV~aet 565 (658)
|-....+-. -.|-.||..+.-+|+.++++-+|...+
T Consensus 75 a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 112 (227)
T 3dhn_A 75 FNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG 112 (227)
T ss_dssp CCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 533222111 127789999999999999876666554
No 139
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=47.83 E-value=70 Score=28.15 Aligned_cols=93 Identities=11% Similarity=0.110 Sum_probs=54.3
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHh-----hhccEEEEc
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYII-----HEVTRVFLG 529 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M-----~~Vd~VlvG 529 (658)
.+.|+..|++..=..+.+.+.+.| +.|+++|..|. .+.+|.+.|+++. .-|..-..++ .++|.||+.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g--~~v~vid~~~~-----~~~~~~~~g~~~i-~gd~~~~~~l~~a~i~~ad~vi~~ 78 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASD--IPLVVIETSRT-----RVDELRERGVRAV-LGNAANEEIMQLAHLECAKWLILT 78 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTT--CCEEEEESCHH-----HHHHHHHTTCEEE-ESCTTSHHHHHHTTGGGCSEEEEC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC--CCEEEEECCHH-----HHHHHHHcCCCEE-ECCCCCHHHHHhcCcccCCEEEEE
Confidence 357888999876555566666555 46777777653 3456777898764 3443322233 467777664
Q ss_pred ceeEecCCCeecccchHHHHHHHhhC--CCCeEeecc
Q 006152 530 ASSVLSNGTVCSRVGTACVAMVAYGF--HIPVLVCCE 564 (658)
Q Consensus 530 AdaV~aNG~VvNKiGT~~lAl~Ak~~--~VPVyV~ae 564 (658)
... ..-+..+++.|+.. ++.+++-+.
T Consensus 79 ~~~---------~~~n~~~~~~a~~~~~~~~iiar~~ 106 (140)
T 3fwz_A 79 IPN---------GYEAGEIVASARAKNPDIEIIARAH 106 (140)
T ss_dssp CSC---------HHHHHHHHHHHHHHCSSSEEEEEES
T ss_pred CCC---------hHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 322 12234466667764 455555443
No 140
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=47.53 E-value=1.6e+02 Score=28.99 Aligned_cols=59 Identities=10% Similarity=0.156 Sum_probs=36.2
Q ss_pred CCcEEEEcc--h---HHHHHhhhccEEEEcceeEecCCCeec-ccchHHHHHHHhhCCCCeEeeccccc
Q 006152 505 GLSCTYTHI--N---AISYIIHEVTRVFLGASSVLSNGTVCS-RVGTACVAMVAYGFHIPVLVCCEAYK 567 (658)
Q Consensus 505 GI~vT~I~D--s---Av~~~M~~Vd~VlvGAdaV~aNG~VvN-KiGT~~lAl~Ak~~~VPVyV~aetyK 567 (658)
|++++.... . .+..+.+++|+||+|...- |.+-. -.|+..-. +.++.++||+|+-+.++
T Consensus 100 ~~~~~~~~~~g~~~~~I~~~a~~~DliV~G~~g~---~~~~~~~~Gs~~~~-vl~~~~~PVlvv~~~~~ 164 (309)
T 3cis_A 100 PPTVHSEIVPAAAVPTLVDMSKDAVLMVVGCLGS---GRWPGRLLGSVSSG-LLRHAHCPVVIIHDEDS 164 (309)
T ss_dssp CSCEEEEEESSCHHHHHHHHGGGEEEEEEESSCT---TCCTTCCSCHHHHH-HHHHCSSCEEEECTTCC
T ss_pred CceEEEEEecCCHHHHHHHHhcCCCEEEECCCCC---ccccccccCcHHHH-HHHhCCCCEEEEcCCcc
Confidence 888876432 2 2222334899999998752 22222 25665544 45566999999976653
No 141
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=47.32 E-value=31 Score=35.29 Aligned_cols=89 Identities=17% Similarity=0.215 Sum_probs=63.0
Q ss_pred cCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEccee
Q 006152 453 RDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASS 532 (658)
Q Consensus 453 ~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~VlvGAda 532 (658)
..|..|..+|+-..+...+ .+.++|+|+|-.|. + |. +++.+.-++++++|.||+=+.+
T Consensus 139 ~~g~kV~vIG~~P~i~~~l------~~~~~v~V~d~~p~-~-----------g~----~p~~~~e~ll~~aD~viiTGsT 196 (270)
T 2h1q_A 139 VKGKKVGVVGHFPHLESLL------EPICDLSILEWSPE-E-----------GD----YPLPASEFILPECDYVYITCAS 196 (270)
T ss_dssp TTTSEEEEESCCTTHHHHH------TTTSEEEEEESSCC-T-----------TC----EEGGGHHHHGGGCSEEEEETHH
T ss_pred cCCCEEEEECCCHHHHHHH------hCCCCEEEEECCCC-C-----------CC----CChHHHHHHhhcCCEEEEEeee
Confidence 3579999999987664433 23579999998887 2 32 4888899999999999987666
Q ss_pred EecCCCeecccchHHHHHHHhhCCCCeEeeccccccccc
Q 006152 533 VLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHER 571 (658)
Q Consensus 533 V~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~aetyKf~~~ 571 (658)
+. ||++- -.+.+ |+ ....++++.+|.-+.+.
T Consensus 197 lv-N~Ti~-----~lL~~-~~-~a~~vvl~GPS~p~~P~ 227 (270)
T 2h1q_A 197 VV-DKTLP-----RLLEL-SR-NARRITLVGPGTPLAPV 227 (270)
T ss_dssp HH-HTCHH-----HHHHH-TT-TSSEEEEESTTCCCCGG
T ss_pred ee-cCCHH-----HHHHh-Cc-cCCeEEEEecChhhhHH
Confidence 54 44322 22332 33 45699999999888775
No 142
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=47.28 E-value=15 Score=36.53 Aligned_cols=93 Identities=13% Similarity=0.083 Sum_probs=53.0
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEcceeE
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASSV 533 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~VlvGAdaV 533 (658)
.|..||..|.+.+-..-++.+.+.|-.+.| ++.+...+ +..|.+.| .++++...--...+..+|+||...+.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtV--vap~~~~~----l~~l~~~~-~i~~i~~~~~~~dL~~adLVIaAT~d- 101 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITV--VAPTVSAE----INEWEAKG-QLRVKRKKVGEEDLLNVFFIVVATND- 101 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEE--ECSSCCHH----HHHHHHTT-SCEEECSCCCGGGSSSCSEEEECCCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEE--ECCCCCHH----HHHHHHcC-CcEEEECCCCHhHhCCCCEEEECCCC-
Confidence 578899999998776767777777765554 44332222 34454444 34455332222234567777644322
Q ss_pred ecCCCeecccchHHHHHHHhhCCCCeEeec
Q 006152 534 LSNGTVCSRVGTACVAMVAYGFHIPVLVCC 563 (658)
Q Consensus 534 ~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~a 563 (658)
.-+ -..++..|+ .+|||-|+-
T Consensus 102 ----~~~----N~~I~~~ak-~gi~VNvvD 122 (223)
T 3dfz_A 102 ----QAV----NKFVKQHIK-NDQLVNMAS 122 (223)
T ss_dssp ----THH----HHHHHHHSC-TTCEEEC--
T ss_pred ----HHH----HHHHHHHHh-CCCEEEEeC
Confidence 122 245777788 999988763
No 143
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=47.25 E-value=96 Score=30.45 Aligned_cols=98 Identities=21% Similarity=0.226 Sum_probs=53.5
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc--------hHHHHHhhh---cc
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI--------NAISYIIHE---VT 524 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D--------sAv~~~M~~---Vd 524 (658)
.+++|.|.+.++..+++.+.+.|. +|++.+ .|.+.. .+...+...|+.+..+.. ..+-..+.+ +.
T Consensus 58 ~v~~~~g~t~a~~~~~~~~~~~gd--~vi~~~-~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~ 133 (366)
T 1m32_A 58 SVLLQGSGSYAVEAVLGSALGPQD--KVLIVS-NGAYGA-RMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTIS 133 (366)
T ss_dssp EEEEESCHHHHHHHHHHHSCCTTC--CEEEEE-SSHHHH-HHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCC
T ss_pred EEEEecChHHHHHHHHHHhcCCCC--eEEEEe-CCCccH-HHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCeE
Confidence 477777777778666665543333 455543 343322 233444566888877742 233334433 33
Q ss_pred EEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 525 RVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 525 ~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
.|++ ...-...|.+.. --.|+-+|++|++.+++
T Consensus 134 ~v~~-~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 166 (366)
T 1m32_A 134 HIAM-VHSETTTGMLNP---IDEVGALAHRYGKTYIV 166 (366)
T ss_dssp EEEE-ESEETTTTEECC---HHHHHHHHHHHTCEEEE
T ss_pred EEEE-ecccCCcceecC---HHHHHHHHHHcCCEEEE
Confidence 3332 221122376665 34677789999987765
No 144
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=47.07 E-value=1.7e+02 Score=26.84 Aligned_cols=35 Identities=3% Similarity=-0.239 Sum_probs=27.7
Q ss_pred HHHHHHHHhCCCcEEEEcchHHHHHhhh---ccEEEEc
Q 006152 495 KLLLRRLVRKGLSCTYTHINAISYIIHE---VTRVFLG 529 (658)
Q Consensus 495 ~~La~eL~~~GI~vT~I~DsAv~~~M~~---Vd~VlvG 529 (658)
.++++.+.+.|+++..|+++.-+.+.+. +|.+|.-
T Consensus 126 i~~~~~ak~~g~~vI~IT~~~~s~la~~~~~ad~~l~~ 163 (196)
T 2yva_A 126 VKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVEIRI 163 (196)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCHHHHTTCCTTSEEEEC
T ss_pred HHHHHHHHHCCCEEEEEeCCCCchhhhcccCCCEEEEe
Confidence 4556788899999999999877777766 8888753
No 145
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=47.05 E-value=62 Score=28.87 Aligned_cols=94 Identities=17% Similarity=0.185 Sum_probs=51.4
Q ss_pred ccCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHH-hCCCcEEEEcchH----HHHH-hhhccE
Q 006152 452 IRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLV-RKGLSCTYTHINA----ISYI-IHEVTR 525 (658)
Q Consensus 452 I~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~-~~GI~vT~I~DsA----v~~~-M~~Vd~ 525 (658)
...++.|+.+|.+..=..+.+.+.+.| ++|++++..|.. +..|. +.|+.+.. .|.. +... +..+|.
T Consensus 16 ~~~~~~v~IiG~G~iG~~la~~L~~~g--~~V~vid~~~~~-----~~~~~~~~g~~~~~-~d~~~~~~l~~~~~~~ad~ 87 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLGSLIANLASSSG--HSVVVVDKNEYA-----FHRLNSEFSGFTVV-GDAAEFETLKECGMEKADM 87 (155)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCGGG-----GGGSCTTCCSEEEE-SCTTSHHHHHTTTGGGCSE
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHhCC--CeEEEEECCHHH-----HHHHHhcCCCcEEE-ecCCCHHHHHHcCcccCCE
Confidence 345789999999876545556666656 478888766542 22333 45665432 2311 1111 456777
Q ss_pred EEEcceeEecCCCeecccchHHHHHHHhh-CCCCeEee
Q 006152 526 VFLGASSVLSNGTVCSRVGTACVAMVAYG-FHIPVLVC 562 (658)
Q Consensus 526 VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~-~~VPVyV~ 562 (658)
||+.... ..-...++.+++. ++...+|+
T Consensus 88 Vi~~~~~---------~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 88 VFAFTND---------DSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp EEECSSC---------HHHHHHHHHHHHHTSCCSEEEE
T ss_pred EEEEeCC---------cHHHHHHHHHHHHHCCCCeEEE
Confidence 7765432 1122455566776 66555444
No 146
>2ahu_A Putative enzyme YDIF; COA transferase, glutamyl thioester, structural genomi montreal-kingston bacterial structural genomics initiative; 1.90A {Escherichia coli} SCOP: c.124.1.3 c.124.1.2 PDB: 2ahv_A* 2ahw_A*
Probab=46.93 E-value=1.7e+02 Score=32.52 Aligned_cols=43 Identities=14% Similarity=0.003 Sum_probs=33.7
Q ss_pred hccEEEEcceeEecCCCeeccc--ch---HHHHHHHhhCCCCeEeecc
Q 006152 522 EVTRVFLGASSVLSNGTVCSRV--GT---ACVAMVAYGFHIPVLVCCE 564 (658)
Q Consensus 522 ~Vd~VlvGAdaV~aNG~VvNKi--GT---~~lAl~Ak~~~VPVyV~ae 564 (658)
++|..|+-|...-.+|.+.-.. +. ..+|++||..+--|+|-++
T Consensus 180 ~~DVAlI~a~~aD~~Gn~~~~~~~~~~~~~~~a~aAk~~gg~VIveVn 227 (531)
T 2ahu_A 180 APDIAFIRATTCDSEGYATFEDEVMYLDALVIAQAVHNNGGIVMMQVQ 227 (531)
T ss_dssp CCSEEEEECSEEETTCCEECTTSSCCTTHHHHHHHHHTTTCEEEEEES
T ss_pred CCeEEEEEcccCCCCceEEEcCcccccCHHHHHHhHhhcCCEEEEEEc
Confidence 5899999999999999977653 23 3679999987777777655
No 147
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=46.90 E-value=1e+02 Score=30.91 Aligned_cols=99 Identities=12% Similarity=0.012 Sum_probs=55.1
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc--------hHHHHHh-hhccEE
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI--------NAISYII-HEVTRV 526 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D--------sAv~~~M-~~Vd~V 526 (658)
.+++|-|.+.++..+++.+.+.| -+|++. .|.+.|.... +...|+.+..+.. ..+-..+ .++..|
T Consensus 89 ~v~~~~g~~~a~~~~~~~l~~~g--d~vl~~--~p~y~~~~~~--~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v 162 (376)
T 2dou_A 89 EALALIGSQEGLAHLLLALTEPE--DLLLLP--EVAYPSYFGA--ARVASLRTFLIPLREDGLADLKAVPEGVWREAKVL 162 (376)
T ss_dssp SEEEESSHHHHHHHHHHHHCCTT--CEEEEE--SSCCHHHHHH--HHHTTCEEEEECBCTTSSBCGGGSCHHHHHHEEEE
T ss_pred cEEEcCCcHHHHHHHHHHhcCCC--CEEEEC--CCCcHhHHHH--HHHcCCEEEEeeCCCCCCCCHHHHHHhhccCceEE
Confidence 78888888888866666553333 356654 4667665433 4457888877752 1222222 345555
Q ss_pred EEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 527 FLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 527 lvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
++- .--...|.++..-=--.++-+|++|++.+++
T Consensus 163 ~l~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 196 (376)
T 2dou_A 163 LLN-YPNNPTGAVADWGYFEEALGLARKHGLWLIH 196 (376)
T ss_dssp EEC-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEC-CCCCCcCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 553 2111224333321123466788999998776
No 148
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=46.83 E-value=74 Score=32.91 Aligned_cols=97 Identities=15% Similarity=0.110 Sum_probs=54.5
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHH-HHH-HHHHhCCCcEEEEcchHHHHH---hh-hccEEEEc
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGK-LLL-RRLVRKGLSCTYTHINAISYI---IH-EVTRVFLG 529 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~-~La-~eL~~~GI~vT~I~DsAv~~~---M~-~Vd~VlvG 529 (658)
+.|+|-+.+.++..+|..+.+.| -+|++. .|.+.|. .+. ..+...|+.++++....+..+ +. ++..|++
T Consensus 83 ~~~~~~sGt~A~~~al~~~~~~g--d~Vi~~--~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~- 157 (392)
T 3qhx_A 83 FGRAFSSGMAAADCALRAMLRPG--DHVVIP--DDAYGGTFRLIDKVFTGWNVEYTPVALADLDAVRAAIRPTTRLIWV- 157 (392)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTT--CEEEEE--TTCCHHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEE-
T ss_pred cEEEECCHHHHHHHHHHHHhCCC--CEEEEe--CCCcchHHHHHHHHHHhcCcEEEEeCCCCHHHHHHhhCCCCeEEEE-
Confidence 46666666666766666554334 356654 4556553 333 334678999999974333333 33 3444443
Q ss_pred ceeEe-cCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 530 ASSVL-SNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 530 AdaV~-aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
+.+. ..|.+.. --.|+-+|++|++.++|
T Consensus 158 -~~~~nptG~~~~---l~~i~~la~~~g~~li~ 186 (392)
T 3qhx_A 158 -ETPTNPLLSIAD---IAGIAQLGADSSAKVLV 186 (392)
T ss_dssp -ESSCTTTCCCCC---HHHHHHHHHHHTCEEEE
T ss_pred -ECCCCCCcEEec---HHHHHHHHHHcCCEEEE
Confidence 2222 1232222 34677889999998876
No 149
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=46.75 E-value=81 Score=31.33 Aligned_cols=97 Identities=13% Similarity=0.076 Sum_probs=54.9
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc--------hHHHHHhhh--ccE
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI--------NAISYIIHE--VTR 525 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D--------sAv~~~M~~--Vd~ 525 (658)
.+++|.|.+.++. +|..+...| -+|++.+ |.+-|..+...+...|+.+..+.. ..+-..+.+ +..
T Consensus 56 ~v~~~~g~t~al~-~~~~~~~~g--d~vi~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~ 130 (384)
T 3zrp_A 56 PLIIPGGGTSAME-SVTSLLKPN--DKILVVS--NGVFGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKL 130 (384)
T ss_dssp EEEEESCHHHHHH-HGGGGCCTT--CEEEEEC--SSHHHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEE
T ss_pred EEEEcCCcHHHHH-HHHhhcCCC--CEEEEec--CCcchHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcE
Confidence 4677777777887 666554333 3566654 344444343444667988888753 233334433 333
Q ss_pred EEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 526 VFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 526 VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
|++- .-=...|.+.. --.|+-+|++|++.+++
T Consensus 131 v~~~-~~~nptG~~~~---l~~i~~l~~~~~~~li~ 162 (384)
T 3zrp_A 131 VALT-HVETSTGVREP---VKDVINKIRKYVELIVV 162 (384)
T ss_dssp EEEE-SEETTTTEECC---HHHHHHHHGGGEEEEEE
T ss_pred EEEe-CCCCCCceECc---HHHHHHHHHhcCCEEEE
Confidence 4332 22233454443 34577789999987776
No 150
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=46.72 E-value=48 Score=32.44 Aligned_cols=74 Identities=20% Similarity=0.179 Sum_probs=44.1
Q ss_pred EEEeeCChHHHHHHHHHHHHcCC-eeEEEEe-CCCCCchHHHHHHHHHhCCCcEEEEc----------chHHHHHhh--h
Q 006152 457 VLLTYGSSSAVEMILQHAHELGK-QFRVVIV-DSRPKHEGKLLLRRLVRKGLSCTYTH----------INAISYIIH--E 522 (658)
Q Consensus 457 vILT~g~SsaV~~vL~~A~e~gk-~f~ViV~-ESRP~~EG~~La~eL~~~GI~vT~I~----------DsAv~~~M~--~ 522 (658)
.||.-|+++.++.+|. +.+++. .++|..+ -.+|...|.+. ..+.|||+.++. |..+-..++ +
T Consensus 4 ~vl~Sg~gsnl~ali~-~~~~~~~~~~i~~Vis~~~~~~~~~~---A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~ 79 (212)
T 1jkx_A 4 VVLISGNGSNLQAIID-ACKTNKIKGTVRAVFSNKADAFGLER---ARQAGIATHTLIASAFDSREAYDRELIHEIDMYA 79 (212)
T ss_dssp EEEESSCCHHHHHHHH-HHHTTSSSSEEEEEEESCTTCHHHHH---HHHTTCEEEECCGGGCSSHHHHHHHHHHHHGGGC
T ss_pred EEEEECCcHHHHHHHH-HHHcCCCCceEEEEEeCCCchHHHHH---HHHcCCcEEEeCcccccchhhccHHHHHHHHhcC
Confidence 5777788888866555 444453 3444333 23455556443 457899998865 234444454 6
Q ss_pred ccEEEEcce-eEe
Q 006152 523 VTRVFLGAS-SVL 534 (658)
Q Consensus 523 Vd~VlvGAd-aV~ 534 (658)
+|.+++-+- .|+
T Consensus 80 ~Dliv~agy~~il 92 (212)
T 1jkx_A 80 PDVVVLAGFMRIL 92 (212)
T ss_dssp CSEEEESSCCSCC
T ss_pred CCEEEEeChhhhC
Confidence 888887543 444
No 151
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=46.58 E-value=1.1e+02 Score=28.62 Aligned_cols=36 Identities=22% Similarity=0.007 Sum_probs=29.7
Q ss_pred HHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEc
Q 006152 494 GKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLG 529 (658)
Q Consensus 494 G~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~VlvG 529 (658)
=.++++.+.+.|+++..|+++.-+.+-+.+|.+|.-
T Consensus 108 ~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~ 143 (201)
T 3fxa_A 108 LLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPV 143 (201)
T ss_dssp HHTTHHHHHHHTCEEEEEESCTTSHHHHHCSEEEEC
T ss_pred HHHHHHHHHHcCCeEEEEECCCCChhHHhCCEEEEc
Confidence 344568888999999999998888888889999864
No 152
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=46.55 E-value=23 Score=37.84 Aligned_cols=77 Identities=21% Similarity=0.261 Sum_probs=51.1
Q ss_pred hccCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEcc
Q 006152 451 KIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGA 530 (658)
Q Consensus 451 ~I~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~VlvGA 530 (658)
.|..|.+||..|.+..-..+++.|.+.| ++|++++..|...+..++ ..-+...|....++-.+..++|.|+.|-
T Consensus 31 ~~~~~~~IlIlG~G~lg~~~~~aa~~lG--~~v~v~d~~~~~p~~~~a----d~~~~~~~~d~~~l~~~a~~~D~V~~~~ 104 (419)
T 4e4t_A 31 PILPGAWLGMVGGGQLGRMFCFAAQSMG--YRVAVLDPDPASPAGAVA----DRHLRAAYDDEAALAELAGLCEAVSTEF 104 (419)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCTTCHHHHHS----SEEECCCTTCHHHHHHHHHHCSEEEECC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEECCCCcCchhhhC----CEEEECCcCCHHHHHHHHhcCCEEEEcc
Confidence 5778999999999987767788887766 467888877776555443 2111111111235555557899999887
Q ss_pred eeE
Q 006152 531 SSV 533 (658)
Q Consensus 531 daV 533 (658)
+.+
T Consensus 105 e~~ 107 (419)
T 4e4t_A 105 ENV 107 (419)
T ss_dssp TTC
T ss_pred CcC
Confidence 665
No 153
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=46.52 E-value=60 Score=31.80 Aligned_cols=96 Identities=14% Similarity=0.072 Sum_probs=53.3
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc--------hHHHHHhh--hccE
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI--------NAISYIIH--EVTR 525 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D--------sAv~~~M~--~Vd~ 525 (658)
.+++|.|.+.++..+++.+.+ -+|++.+ |.+-|..+...+...|+.+..+.. ..+-..+. ++..
T Consensus 54 ~v~~t~g~t~a~~~~~~~~~~----d~vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~ 127 (353)
T 2yrr_A 54 VAALAGSGSLGMEAGLANLDR----GPVLVLV--NGAFSQRVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRRRYRM 127 (353)
T ss_dssp EEEESSCHHHHHHHHHHTCSC----CCEEEEE--CSHHHHHHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHSCCSE
T ss_pred eEEEcCCcHHHHHHHHHHhcC----CcEEEEc--CCCchHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhCCCCE
Confidence 466676666677555544322 3466553 334444333445668988887752 23333343 3455
Q ss_pred EEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 526 VFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 526 VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
|++ ..--...|.+.. --.++-+|++|++.+++
T Consensus 128 v~~-~~~~nptG~~~~---~~~i~~l~~~~~~~li~ 159 (353)
T 2yrr_A 128 VAL-VHGETSTGVLNP---AEAIGALAKEAGALFFL 159 (353)
T ss_dssp EEE-ESEETTTTEECC---HHHHHHHHHHHTCEEEE
T ss_pred EEE-EccCCCcceecC---HHHHHHHHHHcCCeEEE
Confidence 544 333334466554 24677788999987665
No 154
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=45.91 E-value=61 Score=27.63 Aligned_cols=92 Identities=12% Similarity=0.147 Sum_probs=49.4
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchH----HHHH-hhhccEEEEc
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINA----ISYI-IHEVTRVFLG 529 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsA----v~~~-M~~Vd~VlvG 529 (658)
+..|+..|.+..=..+.+.+.+.|. +|++++..+ .-+..+.+.|+.+ +..|.. +..+ +.++|.||+.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~--~v~~~d~~~-----~~~~~~~~~~~~~-~~~d~~~~~~l~~~~~~~~d~vi~~ 77 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGH--EVLAVDINE-----EKVNAYASYATHA-VIANATEENELLSLGIRNFEYVIVA 77 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC--CCEEEESCH-----HHHHTTTTTCSEE-EECCTTCHHHHHTTTGGGCSEEEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--EEEEEeCCH-----HHHHHHHHhCCEE-EEeCCCCHHHHHhcCCCCCCEEEEC
Confidence 4568888887654455556666664 566666543 1233455556643 233321 1111 4567887765
Q ss_pred ceeEecCCCeecccchHHHHHHHhhCCCCeEee
Q 006152 530 ASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVC 562 (658)
Q Consensus 530 AdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~ 562 (658)
+..- .--...++..|+.++++.+|+
T Consensus 78 ~~~~--------~~~~~~~~~~~~~~~~~~ii~ 102 (144)
T 2hmt_A 78 IGAN--------IQASTLTTLLLKELDIPNIWV 102 (144)
T ss_dssp CCSC--------HHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCc--------hHHHHHHHHHHHHcCCCeEEE
Confidence 4320 011235677888888874443
No 155
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=45.90 E-value=2.8e+02 Score=29.49 Aligned_cols=69 Identities=16% Similarity=0.222 Sum_probs=48.1
Q ss_pred HHHHHHhCCCcEEEE--cc---hHHHHHhh---hccEEEEcceeEecCCCeecccchHHHHHHHhhC-CCCeEeeccccc
Q 006152 497 LLRRLVRKGLSCTYT--HI---NAISYIIH---EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGF-HIPVLVCCEAYK 567 (658)
Q Consensus 497 La~eL~~~GI~vT~I--~D---sAv~~~M~---~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~-~VPVyV~aetyK 567 (658)
++..|.+.|+++.++ .| ..++.++. +++.+++|+-++ ||++.-.+-.+..-+.+..+ |+++ .+..+|-
T Consensus 286 ia~gl~~~Gv~~~~~~~~d~~~~~~s~i~~~i~~~~~ivlGspT~--~~~~~p~~~~~l~~l~~~~~~~K~~-~~FGSyG 362 (410)
T 4dik_A 286 AIDSLKEKGFTPVVYKFSDEERPAISEILKDIPDSEALIFGVSTY--EAEIHPLMRFTLLEIIDKANYEKPV-LVFGVHG 362 (410)
T ss_dssp HHHHHHHTTCEEEEEEECSSCCCCHHHHHHHSTTCSEEEEEECCT--TSSSCHHHHHHHHHHHHHCCCCCEE-EEEEECC
T ss_pred HHHHHHhcCCceEEEEeccCCCCCHHHHHHHHHhCCeEEEEeCCc--CCcCCHHHHHHHHHHHhcccCCCEE-EEEECCC
Confidence 346678899998754 33 34677776 789999999886 68888877777666767665 5555 4445654
Q ss_pred c
Q 006152 568 F 568 (658)
Q Consensus 568 f 568 (658)
.
T Consensus 363 W 363 (410)
T 4dik_A 363 W 363 (410)
T ss_dssp C
T ss_pred C
Confidence 3
No 156
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=45.87 E-value=1.6e+02 Score=31.37 Aligned_cols=103 Identities=15% Similarity=0.119 Sum_probs=54.6
Q ss_pred CCCEEEeeCChHHHHHHHHHHHH--------cC----CeeEEEEeCCCCCchHHHHHHHHHhCCC-cEEEEcch------
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHE--------LG----KQFRVVIVDSRPKHEGKLLLRRLVRKGL-SCTYTHIN------ 514 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e--------~g----k~f~ViV~ESRP~~EG~~La~eL~~~GI-~vT~I~Ds------ 514 (658)
.+..++|-|-+.++...|..+.+ .| .+..|++.+ +.+-...-+..+...|. .+..+...
T Consensus 151 ~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~--~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d 228 (504)
T 2okj_A 151 DGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSE--QSHYSIKKAGAALGFGTDNVILIKCNERGKII 228 (504)
T ss_dssp SCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEET--TSCTHHHHHHHHTTSCGGGEEEECBCTTSCBC
T ss_pred CCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECC--cchHHHHHHHHHcCCCcccEEEEecCCCCCCC
Confidence 45678888888777666666643 35 245677754 33333222323323344 77777532
Q ss_pred --HHHHHhhh------ccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 515 --AISYIIHE------VTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 515 --Av~~~M~~------Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
++-..+.+ ..++|+....-...|.+ .. --.|+-+|++|++.|+|
T Consensus 229 ~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i-~~--l~~I~~la~~~g~~lhv 280 (504)
T 2okj_A 229 PADFEAKILEAKQKGYVPFYVNATAGTTVYGAF-DP--IQEIADICEKYNLWLHV 280 (504)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCB-CC--HHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCc-CC--HHHHHHHHHHcCCEEEE
Confidence 33334433 23444432221222433 22 24677889999998876
No 157
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=45.79 E-value=1.1e+02 Score=31.14 Aligned_cols=98 Identities=15% Similarity=0.106 Sum_probs=54.5
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHH-HH-HHhCCCcEEEEcchHHHHHhh----hccEEEEc
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLL-RR-LVRKGLSCTYTHINAISYIIH----EVTRVFLG 529 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La-~e-L~~~GI~vT~I~DsAv~~~M~----~Vd~VlvG 529 (658)
+.|++-+.+.++..+|+.+.+.| -+|++. .|.+.+.... .. +...|+.+.++....+..+-+ ++..|++
T Consensus 81 ~~i~~~sG~~a~~~~l~~~~~~g--d~vi~~--~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~- 155 (398)
T 2rfv_A 81 AGLATASGISAITTTLLTLCQQG--DHIVSA--SAIYGCTHAFLSHSMPKFGINVRFVDAAKPEEIRAAMRPETKVVYI- 155 (398)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTT--CEEEEE--SSSCHHHHHHHHTHHHHTTCEEEEECTTSHHHHHHHCCTTEEEEEE-
T ss_pred cEEEECCHHHHHHHHHHHHhCCC--CEEEEc--CCCcccHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhcCCCCeEEEE-
Confidence 55666655566655565554333 456665 4666665433 22 367899998886433333332 3334443
Q ss_pred ceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 530 ASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 530 AdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
..---..|.+.. -..|+-+|++|++.+++
T Consensus 156 ~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 184 (398)
T 2rfv_A 156 ETPANPTLSLVD---IETVAGIAHQQGALLVV 184 (398)
T ss_dssp ESSBTTTTBCCC---HHHHHHHHHHTTCEEEE
T ss_pred ECCCCCCCcccC---HHHHHHHHHHcCCEEEE
Confidence 211122344443 45677789999988775
No 158
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=45.72 E-value=73 Score=32.20 Aligned_cols=100 Identities=14% Similarity=0.147 Sum_probs=54.7
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc--------------hHHHHHh
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI--------------NAISYII 520 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D--------------sAv~~~M 520 (658)
..+++|-|.+.++..++..+...| -+|++.+ |.+.+.. ..+...|..+..+.. ..+-..+
T Consensus 103 ~~i~~~~g~~~a~~~~~~~l~~~g--d~vl~~~--~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l 176 (407)
T 3nra_A 103 DGLIITPGTQGALFLAVAATVARG--DKVAIVQ--PDYFANR--KLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAF 176 (407)
T ss_dssp TSEEEESHHHHHHHHHHHTTCCTT--CEEEEEE--SCCTHHH--HHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHH
T ss_pred CcEEEeCCcHHHHHHHHHHhCCCC--CEEEEcC--CcccchH--HHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHH
Confidence 467777777777766555443333 3555533 5555533 334456877766643 2333333
Q ss_pred h-hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 521 H-EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 521 ~-~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
. +...|++ ..--...|.++..----.|+-+|++|++.+++
T Consensus 177 ~~~~~~v~~-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 217 (407)
T 3nra_A 177 KAGARVFLF-SNPNNPAGVVYSAEEIGQIAALAARYGATVIA 217 (407)
T ss_dssp HTTCCEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred hhCCcEEEE-cCCCCCCCcccCHHHHHHHHHHHHHcCCEEEE
Confidence 3 4555544 22212235444433345567788999988776
No 159
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=45.60 E-value=1.7e+02 Score=29.52 Aligned_cols=33 Identities=21% Similarity=0.366 Sum_probs=20.0
Q ss_pred CCCEEEeeCChHHHHHHHHHHHH------cCCeeEEEEeC
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHE------LGKQFRVVIVD 487 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e------~gk~f~ViV~E 487 (658)
...+++|.|.+.++..+|+.+.. .|+ -+|++.+
T Consensus 97 ~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~~-~~vi~~~ 135 (397)
T 2ord_A 97 GGKVFFANTGTEANEAAIKIARKYGKKKSEKK-YRILSAH 135 (397)
T ss_dssp SCEEEEESSHHHHHHHHHHHHHHHHHHHCTTC-CEEEEEB
T ss_pred CCeEEEeCCHHHHHHHHHHHHHHHhhcCCCCC-ceEEEEc
Confidence 34567777777778776665543 233 3466665
No 160
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=45.19 E-value=74 Score=35.48 Aligned_cols=113 Identities=25% Similarity=0.349 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHHHHhcCcccccH-HHHHHHHHHHHHhc--------------------CCCCCHHHHHHHHHHHHHHH
Q 006152 374 SRDLTAKISSYVSFLIDCRPLSVSM-GNAIRFLKSQIAKI--------------------PISLSESEAKATLHSDIERF 432 (658)
Q Consensus 374 ~r~L~~~L~~~i~~L~~aRPtsVsm-gNAIr~lk~~I~~~--------------------~~~~~~~eaKe~L~e~Id~f 432 (658)
..+|.+.|...-+...+-+|+|+.+ ||+.+-+-+.++.- +.+++.+|+.+.+.++-+.|
T Consensus 211 ~~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~DlvtDQTSaHdp~~GY~P~g~t~ee~~~l~~~dp~~~ 290 (551)
T 1x87_A 211 TDSLDAALEMAKQAKEEKKALSIGLVGNAAEVLPRLVETGFVPDVLTDQTSAHDPLNGYIPAGLTLDEAAELRARDPKQY 290 (551)
T ss_dssp ESCHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHHTTCCCSEECCCSCTTCTTTTCCCTTCCHHHHHHHHHHCHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCCCCccccCcccccCCCCCCHHHHHHHHHhCHHHH
Confidence 3467777777777788899999875 89987666655541 11347899999999888888
Q ss_pred HHHHHHHHHHHHHHHHH---HhccCCCEEEeeCCh-----------------HHHHHHHHHHHHcCC-eeEEEEeCCCC
Q 006152 433 INEKIILADRVIVKHAV---TKIRDGDVLLTYGSS-----------------SAVEMILQHAHELGK-QFRVVIVDSRP 490 (658)
Q Consensus 433 i~E~i~~a~~~Ia~~a~---~~I~dgdvILT~g~S-----------------saV~~vL~~A~e~gk-~f~ViV~ESRP 490 (658)
.+. +.+.+.+|.. ++-..|..+.-|||+ +-|..+|+-.+..|+ .||=+|+-..|
T Consensus 291 ~~~----~~~Sm~rhv~am~~~~~~G~~~fDYGN~~r~~a~~aG~~~aF~~P~fV~~~irPlF~~G~GPFRWvalSGdp 365 (551)
T 1x87_A 291 IAR----AKQSIAAHVRAMLAMQKQGAVTFDYGNNIRQVAKDEGVDDAFSFPGFVPAYIRPLFCEGKGPFRWVALSGDP 365 (551)
T ss_dssp HHH----HHHHHHHHHHHHHHHHHTTCEECBCSSCHHHHHHHTTCTTGGGSCBHHHHTTHHHHHTTCEEEEEEETTCCH
T ss_pred HHH----HHHHHHHHHHHHHHHHHCCCeeeeccHHHHHHHHhCChhhcCCCCccHHHHhhhHhhcCCCCceeEEcCCCH
Confidence 754 5566666654 455678889999886 234555666666676 47777766655
No 161
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=45.07 E-value=29 Score=30.89 Aligned_cols=78 Identities=15% Similarity=0.194 Sum_probs=50.0
Q ss_pred CCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch---HHHHHhh-hccEEEEcceeEecCCCeecccchHHHHHHHh
Q 006152 478 GKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN---AISYIIH-EVTRVFLGASSVLSNGTVCSRVGTACVAMVAY 553 (658)
Q Consensus 478 gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds---Av~~~M~-~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak 553 (658)
.++.+|.|+|-.|... ..+...|.+.|..|+....+ |+..+-. ..|.||+ |--+.+.+ | +.++-.-+
T Consensus 6 ~r~~rILiVdD~~~~~-~~l~~~L~~~G~~v~~~a~~g~eAl~~~~~~~~Dlvll--Di~mP~~~-----G-~el~~~lr 76 (123)
T 2lpm_A 6 ERRLRVLVVEDESMIA-MLIEDTLCELGHEVAATASRMQEALDIARKGQFDIAII--DVNLDGEP-----S-YPVADILA 76 (123)
T ss_dssp CCCCCEEEESSSTTTS-HHHHHHHHHHCCCCCBCSCCHHHHHHHHHHCCSSEEEE--CSSSSSCC-----S-HHHHHHHH
T ss_pred CCCCEEEEEeCCHHHH-HHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCCCEEEE--ecCCCCCC-----H-HHHHHHHH
Confidence 4678999999888763 23457788899988654433 2333222 5788888 44444432 3 44555556
Q ss_pred hCCCCeEeecc
Q 006152 554 GFHIPVLVCCE 564 (658)
Q Consensus 554 ~~~VPVyV~ae 564 (658)
+.++||++++.
T Consensus 77 ~~~ipvI~lTa 87 (123)
T 2lpm_A 77 ERNVPFIFATG 87 (123)
T ss_dssp HTCCSSCCBCT
T ss_pred cCCCCEEEEec
Confidence 78999988764
No 162
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=45.04 E-value=60 Score=32.24 Aligned_cols=98 Identities=17% Similarity=0.235 Sum_probs=52.2
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc--------hHHHHHhhhccE
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI--------NAISYIIHEVTR 525 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D--------sAv~~~M~~Vd~ 525 (658)
...+++|-|.+.++..++..+ -+|++.+ |.+.+.. ..+...|+.+..+.. ..+-..+.+...
T Consensus 78 ~~~i~~~~g~t~al~~~~~~~------d~vi~~~--~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 147 (361)
T 3ftb_A 78 DIGIVLGNGASEIIELSISLF------EKILIIV--PSYAEYE--INAKKHGVSVVFSYLDENMCIDYEDIISKIDDVDS 147 (361)
T ss_dssp SCEEEEESSHHHHHHHHHTTC------SEEEEEE--SCCTHHH--HHHHHTTCEEEEEECCTTSCCCHHHHHHHTTTCSE
T ss_pred cceEEEcCCHHHHHHHHHHHc------CcEEEec--CChHHHH--HHHHHcCCeEEEeecCcccCCCHHHHHHhccCCCE
Confidence 345677777677775555433 3555543 5665543 334556988888752 234444444233
Q ss_pred EEEcceeEecCCCeecccchHHHHHHHhhCCCCeEee
Q 006152 526 VFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVC 562 (658)
Q Consensus 526 VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~ 562 (658)
|++ ..--...|.++..---..++-+|++|++.+++=
T Consensus 148 v~i-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 183 (361)
T 3ftb_A 148 VII-GNPNNPNGGLINKEKFIHVLKLAEEKKKTIIID 183 (361)
T ss_dssp EEE-ETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEE-eCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEE
Confidence 322 111112233333222334666788999988763
No 163
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=45.04 E-value=46 Score=38.76 Aligned_cols=86 Identities=15% Similarity=0.132 Sum_probs=52.2
Q ss_pred HHHHHHHHHHhccC---CCEEEeeCChHH--HHHHHHHHHHcC---------CeeEEEEeCCCCCchHHHHHHHHHhCCC
Q 006152 441 DRVIVKHAVTKIRD---GDVLLTYGSSSA--VEMILQHAHELG---------KQFRVVIVDSRPKHEGKLLLRRLVRKGL 506 (658)
Q Consensus 441 ~~~Ia~~a~~~I~d---gdvILT~g~Ssa--V~~vL~~A~e~g---------k~f~ViV~ESRP~~EG~~La~eL~~~GI 506 (658)
.++|.++..+++.+ +.+||..|.++- +..+++.+...| ...+||.+|-.|.-. ..++.....|.
T Consensus 393 ~~AI~~al~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~--~~l~~~~~Ng~ 470 (745)
T 3ua3_A 393 GEAVVGALKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAI--VTLKYMNVRTW 470 (745)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHH--HHHHHHHHHTT
T ss_pred HHHHHHHHHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHH--HHHHHHHhcCC
Confidence 34555555566643 358999998874 333455555445 678999999977433 22233333443
Q ss_pred --cEEEEcchHHHHHh-------hhccEEEE
Q 006152 507 --SCTYTHINAISYII-------HEVTRVFL 528 (658)
Q Consensus 507 --~vT~I~DsAv~~~M-------~~Vd~Vlv 528 (658)
.+++|.-.+=-+-+ .+||.+|-
T Consensus 471 ~d~VtVI~gd~eev~lp~~~~~~ekVDIIVS 501 (745)
T 3ua3_A 471 KRRVTIIESDMRSLPGIAKDRGFEQPDIIVS 501 (745)
T ss_dssp TTCSEEEESCGGGHHHHHHHTTCCCCSEEEE
T ss_pred CCeEEEEeCchhhcccccccCCCCcccEEEE
Confidence 48888755544444 47888863
No 164
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=44.97 E-value=1.1e+02 Score=30.92 Aligned_cols=102 Identities=16% Similarity=0.097 Sum_probs=52.6
Q ss_pred CCCEEE--eeCChHHHHHHHHHHHH--cCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc----------hHHHHH
Q 006152 454 DGDVLL--TYGSSSAVEMILQHAHE--LGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI----------NAISYI 519 (658)
Q Consensus 454 dgdvIL--T~g~SsaV~~vL~~A~e--~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D----------sAv~~~ 519 (658)
...+++ |.|.+.+++.+++.+.. .|. +|++. .|.+.|.... +...|..+..+.. ..+-..
T Consensus 89 ~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd--~vl~~--~p~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 162 (394)
T 2ay1_A 89 SETTATLATVGGTGALRQALELARMANPDL--RVFVS--DPTWPNHVSI--MNFMGLPVQTYRYFDAETRGVDFEGMKAD 162 (394)
T ss_dssp GGGEEEEEEEHHHHHHHHHHHHHHHHCTTC--CEEEE--ESCCHHHHHH--HHHHTCCEEEEECEETTTTEECHHHHHHH
T ss_pred cccEEEEecCCchhHHHHHHHHHHhcCCCC--EEEEc--CCCChhHHHH--HHHcCCceEEEecccccCCccCHHHHHHH
Confidence 345666 77777777666654443 343 45554 3667665433 3445777766642 233333
Q ss_pred hhh---ccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 520 IHE---VTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 520 M~~---Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
+.+ .+++++=..--...|.++..-=-..++-+|++|++.+++
T Consensus 163 l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 207 (394)
T 2ay1_A 163 LAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLI 207 (394)
T ss_dssp HHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 432 244444222222233333221122466678888987665
No 165
>1ydm_A Hypothetical protein YQGN; northeast structural genomics, SR44, X-RAY, PSI, protein structure initiative; 2.50A {Bacillus subtilis}
Probab=44.82 E-value=62 Score=30.77 Aligned_cols=104 Identities=14% Similarity=0.081 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHh--ccCCCEEEeeCC--hH-HHHHHHHHHHHcCCeeEEEEe--CCCCC-----chHHHHHHHHHhCCCc
Q 006152 440 ADRVIVKHAVTK--IRDGDVLLTYGS--SS-AVEMILQHAHELGKQFRVVIV--DSRPK-----HEGKLLLRRLVRKGLS 507 (658)
Q Consensus 440 a~~~Ia~~a~~~--I~dgdvILT~g~--Ss-aV~~vL~~A~e~gk~f~ViV~--ESRP~-----~EG~~La~eL~~~GI~ 507 (658)
....|+++..++ +.+..+|+.|-. +. -...+|..+++.||++-|=++ +.+.. ..+..| .-...||.
T Consensus 24 ~s~~i~~~l~~~~~~~~a~~I~~y~~~~~Evdt~~li~~~~~~gk~v~lP~~~~~~~~m~f~~~~~~~~L--~~~~~gi~ 101 (187)
T 1ydm_A 24 KTERMYKYLFSLPEWQNAGTIAVTISRGLEIPTRPVIEQAWEEGKQVCIPKCHPDTKKMQFRTYQTDDQL--ETVYAGLL 101 (187)
T ss_dssp HHHHHHHHHHTSHHHHTCSEEECCCCCTTSCCCHHHHHHHHHTTCEEEEECC---CCCCCEEECCCCTTH--HHHHTTSC
T ss_pred HHHHHHHHHHhCHHhhhCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEeEEecCCCcEEEEEeCCCCcc--CcCCCCCC
Confidence 344566655543 356789999842 11 122567788888875433222 22211 111122 12356763
Q ss_pred EEEEcchHHHHHhhhccEEEEcceeEecCCCeecccchH
Q 006152 508 CTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTA 546 (658)
Q Consensus 508 vT~I~DsAv~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~ 546 (658)
--.- +..-..-..++|.|||.+=++-.+|.=+..=|-|
T Consensus 102 EP~~-~~~~~~~~~~iDlvivP~vafD~~G~RLG~GgGy 139 (187)
T 1ydm_A 102 EPVI-EKTKEVNPSQIDLMIVPGVCFDVNGFRVGFGGGY 139 (187)
T ss_dssp CCC---CCCCCCGGGCCEEECCCSEEETTSCEECCSCCS
T ss_pred CCCC-cccccCCccCCCEEEeCCeEECCCCCcccCCccH
Confidence 2110 0000001347899999999999999766555444
No 166
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=44.55 E-value=31 Score=33.10 Aligned_cols=90 Identities=11% Similarity=0.035 Sum_probs=52.6
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHH-----hhhccEEEEc
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYI-----IHEVTRVFLG 529 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~-----M~~Vd~VlvG 529 (658)
...|+..|++..-..+.+.+.+. .+ |+++|..|.. +.++. .|+.+.+ -|..-... +.++|.||+.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~--g~-v~vid~~~~~-----~~~~~-~~~~~i~-gd~~~~~~l~~a~i~~ad~vi~~ 78 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGS--EV-FVLAEDENVR-----KKVLR-SGANFVH-GDPTRVSDLEKANVRGARAVIVD 78 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTS--EE-EEEESCGGGH-----HHHHH-TTCEEEE-SCTTCHHHHHHTTCTTCSEEEEC
T ss_pred CCEEEEECCChHHHHHHHHHHhC--Ce-EEEEECCHHH-----HHHHh-cCCeEEE-cCCCCHHHHHhcCcchhcEEEEc
Confidence 46788899987765555655443 45 8888866542 33444 6766543 33221122 4567777764
Q ss_pred ceeEecCCCeecccchHHHHHHHhhCCCCeEeec
Q 006152 530 ASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCC 563 (658)
Q Consensus 530 AdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~a 563 (658)
.+ +..-...+++.|+.++....+++
T Consensus 79 ~~---------~d~~n~~~~~~a~~~~~~~~iia 103 (234)
T 2aef_A 79 LE---------SDSETIHCILGIRKIDESVRIIA 103 (234)
T ss_dssp CS---------CHHHHHHHHHHHHHHCSSSEEEE
T ss_pred CC---------CcHHHHHHHHHHHHHCCCCeEEE
Confidence 32 22345678888999876544433
No 167
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=44.53 E-value=1.3e+02 Score=30.59 Aligned_cols=105 Identities=13% Similarity=0.048 Sum_probs=54.0
Q ss_pred cCCCEEE--eeCChHHHHHHHHH--HHHcCC---eeEEEEeCCCCCchHHHHHHHHHhCCCc-EEEEcc----------h
Q 006152 453 RDGDVLL--TYGSSSAVEMILQH--AHELGK---QFRVVIVDSRPKHEGKLLLRRLVRKGLS-CTYTHI----------N 514 (658)
Q Consensus 453 ~dgdvIL--T~g~SsaV~~vL~~--A~e~gk---~f~ViV~ESRP~~EG~~La~eL~~~GI~-vT~I~D----------s 514 (658)
....+++ |.|.+.+++.+++- ....|+ .-+|++.+ |.+.|... .+...|+. +..+.. .
T Consensus 96 ~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~--p~y~~~~~--~~~~~g~~~~~~~~~~~~~~~~~d~~ 171 (412)
T 1ajs_A 96 QEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSS--PTWENHNG--VFTTAGFKDIRSYRYWDTEKRGLDLQ 171 (412)
T ss_dssp HTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEE--SCCTHHHH--HHHHTTCSCEEEEECEETTTTEECHH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcC--CCcHHHHH--HHHHcCCceeEEEeeecCCCCccCHH
Confidence 3457888 88888887666432 223331 03566553 66666443 34456887 766642 2
Q ss_pred HHHHHhhh---ccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 515 AISYIIHE---VTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 515 Av~~~M~~---Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
.+-..+.+ -+++++=+.--...|.++..-=--.|+-+|+.|++.+++
T Consensus 172 ~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 221 (412)
T 1ajs_A 172 GFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFF 221 (412)
T ss_dssp HHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 23333333 123332232222334333322122577788899987765
No 168
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=44.25 E-value=1.9e+02 Score=26.49 Aligned_cols=36 Identities=14% Similarity=0.030 Sum_probs=28.3
Q ss_pred hHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEE
Q 006152 493 EGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFL 528 (658)
Q Consensus 493 EG~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~Vlv 528 (658)
+-.++++.+.+.|+++..|+++.-+.+.+.+|.+|.
T Consensus 131 ~~~~~~~~ak~~g~~vI~IT~~~~s~L~~~ad~~l~ 166 (198)
T 2xbl_A 131 NILAAFREAKAKGMTCVGFTGNRGGEMRELCDLLLE 166 (198)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSCCCTHHHHCSEEEE
T ss_pred HHHHHHHHHHHCCCeEEEEECCCCCcHHHhCCEEEE
Confidence 345566788889999999998777777778898874
No 169
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=44.04 E-value=2.4e+02 Score=27.58 Aligned_cols=98 Identities=12% Similarity=0.084 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHcCCeeEEEE-eCCCCCc-------------------hHHHHH----HHHHhCCCcEEEEcc---hHHH
Q 006152 465 SAVEMILQHAHELGKQFRVVI-VDSRPKH-------------------EGKLLL----RRLVRKGLSCTYTHI---NAIS 517 (658)
Q Consensus 465 saV~~vL~~A~e~gk~f~ViV-~ESRP~~-------------------EG~~La----~eL~~~GI~vT~I~D---sAv~ 517 (658)
.++...+.-|...+..+.++. ++..|.. ++.+.+ ..+...|++++.... ....
T Consensus 22 ~al~~A~~lA~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~g~~~~ 101 (319)
T 3olq_A 22 PALRRAVYIVQRNGGRIKAFLPVYDLSYDMTTLLSPDERNAMRKGVINQKTAWIKQQARYYLEAGIQIDIKVIWHNRPYE 101 (319)
T ss_dssp HHHHHHHHHHHHHCCEEEEEEEECCGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSCHHH
T ss_pred HHHHHHHHHHHHcCCeEEEEEEecccchhhccccChhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEEEecCChHH
Confidence 456666666766777777654 3433320 111122 234467998866533 3333
Q ss_pred HHhh-----hccEEEEcceeEecCCCeecc-cchHHHHHHHhhCCCCeEeecccc
Q 006152 518 YIIH-----EVTRVFLGASSVLSNGTVCSR-VGTACVAMVAYGFHIPVLVCCEAY 566 (658)
Q Consensus 518 ~~M~-----~Vd~VlvGAdaV~aNG~VvNK-iGT~~lAl~Ak~~~VPVyV~aety 566 (658)
.++. .+|+||+|...- +.+-.. .|+....+ .++.++||+|+-+..
T Consensus 102 ~i~~~a~~~~~DLiV~G~~g~---~~~~~~~~Gs~~~~v-l~~~~~PVlvv~~~~ 152 (319)
T 3olq_A 102 AIIEEVITDKHDLLIKMAHQH---DKLGSLIFTPLDWQL-LRKCPAPVWMVKDKE 152 (319)
T ss_dssp HHHHHHHHHTCSEEEEEEBCC-----CCSCBCCHHHHHH-HHHCSSCEEEEESSC
T ss_pred HHHHHHHhcCCCEEEEecCcC---chhhcccccccHHHH-HhcCCCCEEEecCcc
Confidence 3333 589999999853 222222 57766555 467789999997654
No 170
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=43.77 E-value=30 Score=33.73 Aligned_cols=102 Identities=9% Similarity=0.004 Sum_probs=55.4
Q ss_pred EEEeeCChHHHHHHH-HHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEc--c-hHHHHHhhhccEEEEccee
Q 006152 457 VLLTYGSSSAVEMIL-QHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTH--I-NAISYIIHEVTRVFLGASS 532 (658)
Q Consensus 457 vILT~g~SsaV~~vL-~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~--D-sAv~~~M~~Vd~VlvGAda 532 (658)
+||..|-+.-+...| +.+.+. ...+|+++.-+|.. +..|...|+.+.... | ..+..++..+|.||.-|-.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~-~g~~V~~~~R~~~~-----~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 75 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIAN-HIDHFHIGVRNVEK-----VPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI 75 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHT-TCTTEEEEESSGGG-----SCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred EEEEEcCCchHHHHHHHHHhhC-CCCcEEEEECCHHH-----HHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 467777654444333 333333 13445554333321 112334565544332 2 3456667777777765422
Q ss_pred EecCCCeecccchHHHHHHHhhCCCCeEeecccc
Q 006152 533 VLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAY 566 (658)
Q Consensus 533 V~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~aety 566 (658)
. +....|-.||..+.-+|+..+++-+|...+|
T Consensus 76 ~--~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~ 107 (289)
T 3e48_A 76 I--HPSFKRIPEVENLVYAAKQSGVAHIIFIGYY 107 (289)
T ss_dssp C--CSHHHHHHHHHHHHHHHHHTTCCEEEEEEES
T ss_pred C--ccchhhHHHHHHHHHHHHHcCCCEEEEEccc
Confidence 1 1112355788888889999999877777665
No 171
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=43.40 E-value=1.3e+02 Score=27.00 Aligned_cols=61 Identities=11% Similarity=0.213 Sum_probs=35.6
Q ss_pred HHHHhCCCc-EEEEc--chHHHHHhh-----hccEEEEcceeEecCCCeec-ccchHHHHHHHhhCCCCeEeec
Q 006152 499 RRLVRKGLS-CTYTH--INAISYIIH-----EVTRVFLGASSVLSNGTVCS-RVGTACVAMVAYGFHIPVLVCC 563 (658)
Q Consensus 499 ~eL~~~GI~-vT~I~--DsAv~~~M~-----~Vd~VlvGAdaV~aNG~VvN-KiGT~~lAl~Ak~~~VPVyV~a 563 (658)
..|.+.|++ ++... .+..-.++. ++|+||+|+..- |.+-. -.|+-.--+ .++..+||+|+-
T Consensus 88 ~~~~~~gv~~v~~~v~~G~~~~~I~~~a~~~~~DLIV~G~~g~---~~~~~~~lGSva~~v-l~~a~~PVlvV~ 157 (163)
T 1tq8_A 88 ERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGL---STIAGRLLGSVPANV-SRRAKVDVLIVH 157 (163)
T ss_dssp HHHHTTTCCEEEEEEECSSHHHHHHHHHHHTTCSEEEEECCCC---CSHHHHHTBBHHHHH-HHHTTCEEEEEC
T ss_pred HHHHHcCCCeEEEEEecCCHHHHHHHHHHhcCCCEEEECCCCC---CcccceeeccHHHHH-HHhCCCCEEEEe
Confidence 345567998 65432 333333333 699999999742 22211 246544444 455679999984
No 172
>1xr4_A Putative citrate lyase alpha chain/citrate-ACP TR; the midwest center for structural genomics, MCSG, structural genomics; 2.37A {Salmonella typhimurium} SCOP: c.124.1.2 c.124.1.2
Probab=43.26 E-value=3.2e+02 Score=30.20 Aligned_cols=150 Identities=21% Similarity=0.213 Sum_probs=85.1
Q ss_pred HHHHHHHHHHhc------cCCCEEEeeCC---hHHHHHHHHHH-HHcCCeeEE---EEeCCCCCchHHHHHHHHHhCCC-
Q 006152 441 DRVIVKHAVTKI------RDGDVLLTYGS---SSAVEMILQHA-HELGKQFRV---VIVDSRPKHEGKLLLRRLVRKGL- 506 (658)
Q Consensus 441 ~~~Ia~~a~~~I------~dgdvILT~g~---SsaV~~vL~~A-~e~gk~f~V---iV~ESRP~~EG~~La~eL~~~GI- 506 (658)
.+.|+++++++| +|| -.|=+|- ..+|...|.+- .+.+-.-.+ -+.+ -...|.+.|+
T Consensus 250 ~~~IA~~~a~~i~~~g~~~dG-~~lqlGIG~ip~aV~~~l~~~~~~l~i~se~g~~g~~d---------~~~~l~e~G~i 319 (509)
T 1xr4_A 250 ELLIARQAANVIEHSGYFCDG-FSLQTGTGGASLAVTRFLEDKMRRHNITASFGLGGITG---------TMVDLHEKGLI 319 (509)
T ss_dssp HHHHHHHHHHHHHTTSCCSTT-EEEECCSSHHHHHHHHHHHHHHHHTTCCEEEEEEEECH---------HHHHHHHTTSB
T ss_pred HHHHHHHHHHHHHhcCcCCCC-CEEEeccChHHHHHHHHhhhhcccceeecccccCCcCC---------ccHhHHhCCCc
Confidence 467899999999 999 4444554 45677777664 344433333 1111 1245666664
Q ss_pred ----cEEEEcchHHH-----------------------HHhhhccEEEEcceeEecCCCeeccc--c---------hHHH
Q 006152 507 ----SCTYTHINAIS-----------------------YIIHEVTRVFLGASSVLSNGTVCSRV--G---------TACV 548 (658)
Q Consensus 507 ----~vT~I~DsAv~-----------------------~~M~~Vd~VlvGAdaV~aNG~VvNKi--G---------T~~l 548 (658)
+++-....+.. +...+.|..|+||=-|-.+|.+.+-. | ...+
T Consensus 320 ~~~~~~~~f~~g~~~~~~~n~~~~~~~~~~~~n~~~~~~~~~~ldiai~galevD~~G~vn~~~~~~g~~~~G~GG~~D~ 399 (509)
T 1xr4_A 320 KALLDTQSFDGDAARSLAQNPHHIEISTNQYANPASKGAACERLNVVMLSALEIDVNFNVNVMTGSNGVLRGASGGHSDT 399 (509)
T ss_dssp SCEEEEEECSHHHHHHHHHCTTEEECCHHHHTCTTCSCCGGGGCSEEEECCSEECTTCCEECSBCTTSCBCSBCTTHHHH
T ss_pred cCCcceeEeeccHHHHHHhCCcceEEeccccccCcchhhhhcCCCeEEeeeEEEccCCceeeeeccCCeEecccccHHHH
Confidence 12111111111 23346799999999998888887766 2 2334
Q ss_pred HHHHhhCCCCeEeecccccccccccCCcccccccCCcccccccCCccccccCCCccCCCCceeccceeeecCCCCccEEE
Q 006152 549 AMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGDPDSISKVPGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLII 628 (658)
Q Consensus 549 Al~Ak~~~VPVyV~aetyKf~~~~~~ds~~~nElrdp~Ev~~~~g~~~~~~l~~~~~~~~l~v~Np~FDvTPpeLIT~II 628 (658)
+.-|+. +++|+++.. +. .+ .+. +.+ ..=.||-+.|+.||
T Consensus 400 ~~gA~~----sii~~~~t~-------~~-------~s-kIV-----------------~~~-----~~v~t~~~~V~~iV 438 (509)
T 1xr4_A 400 AAGADL----TIITAPLVR-------GR-------IP-CVV-----------------EKV-----LTTVTPGASVDVLV 438 (509)
T ss_dssp HHHSSE----EEEECCSEE-------TT-------EE-SBC-----------------SSC-----SSCSBCGGGCCEEE
T ss_pred hhccCe----EEEEEcccC-------CC-------CC-eEe-----------------eCC-----CCcccCcCeeCEEE
Confidence 444542 566666542 10 00 010 000 22346789999999
Q ss_pred eCCCCcC-CCcchH
Q 006152 629 TDYGMVS-HTLVSV 641 (658)
Q Consensus 629 TE~Gii~-PssVpv 641 (658)
||+|++. +....+
T Consensus 439 TE~Gva~~l~g~~l 452 (509)
T 1xr4_A 439 TDHGIAVNPARQDL 452 (509)
T ss_dssp ETTEEEECTTCHHH
T ss_pred CCcEEEEcCCCCCH
Confidence 9999998 665543
No 173
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=43.00 E-value=1.2e+02 Score=31.20 Aligned_cols=100 Identities=16% Similarity=0.099 Sum_probs=52.5
Q ss_pred CEEEeeCChHHHHHHHH--HHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc----------hHHHHHhh--
Q 006152 456 DVLLTYGSSSAVEMILQ--HAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI----------NAISYIIH-- 521 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~--~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D----------sAv~~~M~-- 521 (658)
.+++|.|.+.++..+++ .....| -+|++.+ |.+.+.. ..+...|..+..+.- ..+-..+.
T Consensus 119 ~i~~t~G~t~al~~~~~~~~~~~~g--d~Vlv~~--p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 192 (420)
T 4f4e_A 119 VTAQALGGTGALKIGADFLRTLNPK--AKVAISD--PSWENHR--ALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGY 192 (420)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHCTT--CCEEEEE--SCCHHHH--HHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTC
T ss_pred EEEECCccHHHHHHHHHHHHHhCCC--CEEEEeC--CCcHhHH--HHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhC
Confidence 67888888887766533 223333 3455543 7676643 334456877776643 12333333
Q ss_pred -hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 522 -EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 522 -~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
.-+++++=...--..|.+++.----.|+-+|++|++.+++
T Consensus 193 ~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 233 (420)
T 4f4e_A 193 EPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFL 233 (420)
T ss_dssp CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEE
Confidence 1223333222222234444333334677788888887765
No 174
>3k6m_A Succinyl-COA:3-ketoacid-coenzyme A transferase 1, mitochondrial; SCOT, COA transferase, dynamic domain, glycerol, mitochondri transferase; 1.50A {Sus scrofa} PDB: 1m3e_A* 1o9l_A 1ooy_A 2nrc_A 2nrb_A 3oxo_A* 1ooz_A 1ope_A 3dlx_A
Probab=42.99 E-value=35 Score=37.67 Aligned_cols=97 Identities=18% Similarity=0.183 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHhccCCCEEEeeCCh--HHHHHHHHHHHHcCCeeEEEEeCC-----CCCchHHHHHHHHHhCCC-cEE--
Q 006152 440 ADRVIVKHAVTKIRDGDVLLTYGSS--SAVEMILQHAHELGKQFRVVIVDS-----RPKHEGKLLLRRLVRKGL-SCT-- 509 (658)
Q Consensus 440 a~~~Ia~~a~~~I~dgdvILT~g~S--saV~~vL~~A~e~gk~f~ViV~ES-----RP~~EG~~La~eL~~~GI-~vT-- 509 (658)
.++.|+.+++..|+||++|- .|-+ ++|..+| ..++.+ .+.+|+ .|+...-..-..|...|- .++
T Consensus 262 ~~~~Ia~raA~el~dG~~vn-lGIGiP~~v~~~~----~~~~~l-~l~~E~G~~g~~p~~~~~~~d~~~in~Gk~~~t~~ 335 (481)
T 3k6m_A 262 VRERIIKRAALEFEDGMYAN-LGIGIPLLASNFI----SPNMTV-HLQSENGILGLGPYPLQNEVDADLINAGKETVTVL 335 (481)
T ss_dssp CHHHHHHHHGGGCCTTEEEE-ECTTHHHHHGGGC----CTTSCE-EEEETTTEEEECCCCCGGGCCTTCBCTTSBBCCEE
T ss_pred HHHHHHHHHHHhcCCCCEEE-EccCHHHHHHhhh----ccCCcE-EEEECCcEeCCccCCCCCccCcccccCCCceEecc
Confidence 45679999999999998543 3444 4443333 234433 233443 454321111122344452 222
Q ss_pred ---EEcchHHHHHh-h--hccEEEEcceeEecCCCeecc
Q 006152 510 ---YTHINAISYII-H--EVTRVFLGASSVLSNGTVCSR 542 (658)
Q Consensus 510 ---~I~DsAv~~~M-~--~Vd~VlvGAdaV~aNG~VvNK 542 (658)
-+.|+.-.|-| . ++|..|+||=-|-.+|.+.|-
T Consensus 336 ~g~~~~~~~~~F~~~~gG~~Dv~ilga~qVD~~Gnvn~~ 374 (481)
T 3k6m_A 336 PGASYFSSDESFAMIRGGHVNLTMLGAMQVSKYGDLANW 374 (481)
T ss_dssp EEEEECCHHHHHHHHHTTCCSEEEECCSEEETTCCEECS
T ss_pred ccceecCCHHHeeeecCCCeEEEEechHhccCCCCcccc
Confidence 33455555544 4 799999999999999998543
No 175
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=42.96 E-value=1.6e+02 Score=30.44 Aligned_cols=98 Identities=10% Similarity=0.080 Sum_probs=54.3
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHH-H-HHHhCCCcEEEEcc---hHHHHHhh-hccEEEEc
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLL-R-RLVRKGLSCTYTHI---NAISYIIH-EVTRVFLG 529 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La-~-eL~~~GI~vT~I~D---sAv~~~M~-~Vd~VlvG 529 (658)
+.|++-+.+.++..++....+.| -+|++. .|.+.+.... . .+...|+.+.++.. ..+-..+. ++..|++
T Consensus 79 ~~i~~~~g~~ai~~~~~~l~~~g--d~Vl~~--~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~t~~v~l- 153 (404)
T 1e5e_A 79 ACVATSSGMGAIAATVLTILKAG--DHLISD--ECLYGCTHALFEHALTKFGIQVDFINTAIPGEVKKHMKPNTKIVYF- 153 (404)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTT--CEEEEE--SCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHHCCTTEEEEEE-
T ss_pred cEEEeCChHHHHHHHHHHHhCCC--CEEEEe--CCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCcEEEE-
Confidence 55666555556655554443333 356664 5666654332 2 46678999998863 23333333 3334443
Q ss_pred ceeEecCCCeecccchHHHHHHHhh-CCCCeEe
Q 006152 530 ASSVLSNGTVCSRVGTACVAMVAYG-FHIPVLV 561 (658)
Q Consensus 530 AdaV~aNG~VvNKiGT~~lAl~Ak~-~~VPVyV 561 (658)
..---..|.+.. --.|+-+|++ |++.|++
T Consensus 154 ~~p~NptG~v~~---l~~i~~la~~~~~~~li~ 183 (404)
T 1e5e_A 154 ETPANPTLKIID---MERVCKDAHSQEGVLVIA 183 (404)
T ss_dssp ESSCTTTCCCCC---HHHHHHHHHTSTTCEEEE
T ss_pred ECCCCCCCcccC---HHHHHHHHHhhcCCEEEE
Confidence 211123344442 3567778999 9998776
No 176
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=42.92 E-value=2.2e+02 Score=26.83 Aligned_cols=35 Identities=6% Similarity=-0.156 Sum_probs=28.2
Q ss_pred HHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEE
Q 006152 494 GKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFL 528 (658)
Q Consensus 494 G~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~Vlv 528 (658)
=.++++.+.+.|+++..|+++.-+.+-+.+|.+|.
T Consensus 147 ~i~~~~~ak~~G~~vIaIT~~~~s~La~~aD~~l~ 181 (212)
T 2i2w_A 147 VIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIR 181 (212)
T ss_dssp HHHHHHHHHHHTCEEEEEEETTCGGGTTCSSEEEE
T ss_pred HHHHHHHHHHCCCeEEEEECCCCCchHHhCCEEEE
Confidence 34566888889999999999876777778898876
No 177
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=42.61 E-value=62 Score=33.55 Aligned_cols=97 Identities=16% Similarity=0.122 Sum_probs=53.3
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHH--HHHhCCCcEEEEcch--HHHHHhh-hccEEEEcc
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLR--RLVRKGLSCTYTHIN--AISYIIH-EVTRVFLGA 530 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~--eL~~~GI~vT~I~Ds--Av~~~M~-~Vd~VlvGA 530 (658)
+.|++-+.+.++..+|. ..+.| -+|++.+ |.+.|..... .+...|+.++++... .+-..+. ++..|++ .
T Consensus 72 ~~i~~~sGt~a~~~al~-~~~~g--d~Vi~~~--~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~l~~~i~~~t~lv~~-~ 145 (393)
T 1n8p_A 72 YGLAFSSGSATTATILQ-SLPQG--SHAVSIG--DVYGGTHRYFTKVANAHGVETSFTNDLLNDLPQLIKENTKLVWI-E 145 (393)
T ss_dssp EEEEESCHHHHHHHHHH-TSCSS--CEEEEES--SCCHHHHHHHHHTSTTTCSCCEEESSHHHHHHHHSCSSEEEEEE-C
T ss_pred cEEEECChHHHHHHHHH-HcCCC--CEEEEeC--CCchHHHHHHHHHHHHcCcEEEEeCCChHHHHHhcccCceEEEE-E
Confidence 45555544566666666 43333 4666655 6776643332 456679999998742 3333333 3334443 2
Q ss_pred eeEecCCCeecccchHHHHHHHhhC----CCCeEe
Q 006152 531 SSVLSNGTVCSRVGTACVAMVAYGF----HIPVLV 561 (658)
Q Consensus 531 daV~aNG~VvNKiGT~~lAl~Ak~~----~VPVyV 561 (658)
..--..|.+.. --.|+-+|++| +++|+|
T Consensus 146 ~~~nptG~~~~---l~~i~~la~~~~~~~~~~liv 177 (393)
T 1n8p_A 146 TPTNPTLKVTD---IQKVADLIKKHAAGQDVILVV 177 (393)
T ss_dssp SSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEE
T ss_pred CCCCCcceecC---HHHHHHHHHHhCCCCCCEEEE
Confidence 11122344432 34577788898 888776
No 178
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=42.61 E-value=1e+02 Score=33.93 Aligned_cols=112 Identities=16% Similarity=0.235 Sum_probs=67.7
Q ss_pred ccCCCEEEeeCChHHHHHHHH-HHHHcCCeeEEEEeCCCC-Cch-HHHHHHHHHhCCCcEEEE-cc----hHHHHHhhh-
Q 006152 452 IRDGDVLLTYGSSSAVEMILQ-HAHELGKQFRVVIVDSRP-KHE-GKLLLRRLVRKGLSCTYT-HI----NAISYIIHE- 522 (658)
Q Consensus 452 I~dgdvILT~g~SsaV~~vL~-~A~e~gk~f~ViV~ESRP-~~E-G~~La~eL~~~GI~vT~I-~D----sAv~~~M~~- 522 (658)
+..+.+||..|-+.-+...|. .+.++|.. +|+++.-++ ..+ -.++..+|...|..++++ +| .++..++.+
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~-~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~ 334 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAE-RLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAY 334 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCS-EEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHS
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCc-EEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcC
Confidence 345677888887766554443 34444432 455443332 222 345668898889888776 34 456667766
Q ss_pred -ccEEEEcceeEecCCCe-------------ecccchHHHHHHHhhC-CCCeEeeccc
Q 006152 523 -VTRVFLGASSVLSNGTV-------------CSRVGTACVAMVAYGF-HIPVLVCCEA 565 (658)
Q Consensus 523 -Vd~VlvGAdaV~aNG~V-------------vNKiGT~~lAl~Ak~~-~VPVyV~aet 565 (658)
+|.||--|- +..+|.+ .|-.|+..+.-+++.+ +..++|++-+
T Consensus 335 ~ld~VVh~AG-v~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS 391 (511)
T 2z5l_A 335 PPNAVFHTAG-ILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSS 391 (511)
T ss_dssp CCSEEEECCC-CCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEE
T ss_pred CCcEEEECCc-ccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeC
Confidence 888887663 3334322 2556777777777766 6777776554
No 179
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=42.59 E-value=1.3e+02 Score=29.02 Aligned_cols=36 Identities=8% Similarity=-0.179 Sum_probs=29.8
Q ss_pred hHHHHHHHHHhCCCcEEEEcchHHH-----------HHhhhccEEEE
Q 006152 493 EGKLLLRRLVRKGLSCTYTHINAIS-----------YIIHEVTRVFL 528 (658)
Q Consensus 493 EG~~La~eL~~~GI~vT~I~DsAv~-----------~~M~~Vd~Vlv 528 (658)
+=.++++.+.+.|+++..|+++.-+ .+.+.+|.+|.
T Consensus 123 ~~i~~~~~Ak~~G~~vI~IT~~~~s~~~~~~~~~g~~La~~aD~~l~ 169 (243)
T 3cvj_A 123 VPVEMAIESRNIGAKVIAMTSMKHSQKVTSRHKSGKKLYEYADVVLD 169 (243)
T ss_dssp HHHHHHHHHHHHTCEEEEEECHHHHHHSCCCSTTSCCGGGGCSEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCCcccccccccCCCcCcHHHhCCEEEE
Confidence 4456678889999999999998777 67778999885
No 180
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=42.27 E-value=93 Score=31.31 Aligned_cols=102 Identities=14% Similarity=0.122 Sum_probs=54.0
Q ss_pred cCCC-EEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch-------HHHHHhh---
Q 006152 453 RDGD-VLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN-------AISYIIH--- 521 (658)
Q Consensus 453 ~dgd-vILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds-------Av~~~M~--- 521 (658)
.... +++|.|.+.++..++..+.+.| -+|++.+ |.+.|... .+...|+.+..+... -+..+-+
T Consensus 85 ~~~~~v~~~~g~~~a~~~~~~~~~~~g--d~vl~~~--~~~~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 158 (389)
T 1gd9_A 85 DPKTEIMVLLGANQAFLMGLSAFLKDG--EEVLIPT--PAFVSYAP--AVILAGGKPVEVPTYEEDEFRLNVDELKKYVT 158 (389)
T ss_dssp CTTTSEEEESSTTHHHHHHHTTTCCTT--CEEEEEE--SCCTTHHH--HHHHHTCEEEEEECCGGGTTCCCHHHHHHHCC
T ss_pred CCCCeEEEcCChHHHHHHHHHHhCCCC--CEEEEcC--CCchhHHH--HHHHCCCEEEEeccCCccCCCCCHHHHHHhcC
Confidence 3456 8899988888876666553333 3566543 55555433 334568888777521 1222222
Q ss_pred -hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 522 -EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 522 -~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
++..|++ ..--...|.++..-=--.++-+|++|++.+++
T Consensus 159 ~~~~~v~~-~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~ 198 (389)
T 1gd9_A 159 DKTRALII-NSPCNPTGAVLTKKDLEEIADFVVEHDLIVIS 198 (389)
T ss_dssp TTEEEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCceEEEE-ECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 2333433 11111123333222233466688999987776
No 181
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=42.22 E-value=40 Score=33.24 Aligned_cols=74 Identities=20% Similarity=0.123 Sum_probs=44.6
Q ss_pred EEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEc----------chHHHHHhh--hcc
Q 006152 457 VLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTH----------INAISYIIH--EVT 524 (658)
Q Consensus 457 vILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~----------DsAv~~~M~--~Vd 524 (658)
.||.-|+++.++.+|... +.+..++|..+=|.|...+.+ .-.+.|||+..+. |..+...++ ++|
T Consensus 16 ~vl~SG~gsnl~all~~~-~~~~~~eI~~Vis~~~a~~~~---~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~D 91 (215)
T 3da8_A 16 VVLASGTGSLLRSLLDAA-VGDYPARVVAVGVDRECRAAE---IAAEASVPVFTVRLADHPSRDAWDVAITAATAAHEPD 91 (215)
T ss_dssp EEEESSCCHHHHHHHHHS-STTCSEEEEEEEESSCCHHHH---HHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHTTCCS
T ss_pred EEEEeCChHHHHHHHHHH-hccCCCeEEEEEeCCchHHHH---HHHHcCCCEEEeCcccccchhhhhHHHHHHHHhhCCC
Confidence 355558899987766544 323345666555555444433 3456799998885 234445555 688
Q ss_pred EEEEcc-eeEe
Q 006152 525 RVFLGA-SSVL 534 (658)
Q Consensus 525 ~VlvGA-daV~ 534 (658)
.+++-+ -.|+
T Consensus 92 livlagy~~iL 102 (215)
T 3da8_A 92 LVVSAGFMRIL 102 (215)
T ss_dssp EEEEEECCSCC
T ss_pred EEEEcCchhhC
Confidence 888754 3444
No 182
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=42.08 E-value=1.2e+02 Score=26.91 Aligned_cols=99 Identities=11% Similarity=0.149 Sum_probs=53.2
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEc--c-hHHHHH-hhhccEEEEcc
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTH--I-NAISYI-IHEVTRVFLGA 530 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~--D-sAv~~~-M~~Vd~VlvGA 530 (658)
+..|+..|++..=..+.+.+.+.| +.|+++|..|.. -.+.+.++...|+.+.+-. | ..+... +.++|.||+..
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g--~~V~vid~~~~~-~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRG--QNVTVISNLPED-DIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALS 79 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTT--CCEEEEECCCHH-HHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CCEEEEECCChH-HHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEec
Confidence 345777798877666666666656 467777765421 1112233345677654422 1 112222 45778777654
Q ss_pred eeEecCCCeecccchHHHHHHHhhC-C-CCeEeeccc
Q 006152 531 SSVLSNGTVCSRVGTACVAMVAYGF-H-IPVLVCCEA 565 (658)
Q Consensus 531 daV~aNG~VvNKiGT~~lAl~Ak~~-~-VPVyV~aet 565 (658)
+. ..-...+++.|+.. + ..+++.+..
T Consensus 80 ~~---------d~~n~~~~~~a~~~~~~~~ii~~~~~ 107 (153)
T 1id1_A 80 DN---------DADNAFVVLSAKDMSSDVKTVLAVSD 107 (153)
T ss_dssp SC---------HHHHHHHHHHHHHHTSSSCEEEECSS
T ss_pred CC---------hHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 32 12235677788875 4 345554443
No 183
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=41.52 E-value=66 Score=31.06 Aligned_cols=102 Identities=9% Similarity=0.076 Sum_probs=56.9
Q ss_pred EEEeeCChHHHHHHHH-HHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEc--c-hHHHHHhhhccEEEEccee
Q 006152 457 VLLTYGSSSAVEMILQ-HAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTH--I-NAISYIIHEVTRVFLGASS 532 (658)
Q Consensus 457 vILT~g~SsaV~~vL~-~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~--D-sAv~~~M~~Vd~VlvGAda 532 (658)
+||..|-+.-+..-|. .+.++...++|+++.-++.. +..|...++.+.... | ..+..++..+|.||--|-.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~-----~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 76 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEK-----ASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGP 76 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTT-----THHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHH-----HhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCC
Confidence 4677776655544443 34333124567766544321 123445566543321 2 3566677788888764431
Q ss_pred EecCCCeecccchHHHHHHHhhCCCCeEeeccc
Q 006152 533 VLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEA 565 (658)
Q Consensus 533 V~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~aet 565 (658)
- -+.-+|-.||..+.-+|+.+++.-+|...+
T Consensus 77 ~--~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 107 (287)
T 2jl1_A 77 H--YDNTLLIVQHANVVKAARDAGVKHIAYTGY 107 (287)
T ss_dssp C--SCHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred C--cCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 1 111236779999998999999866665544
No 184
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=41.50 E-value=1.9e+02 Score=28.92 Aligned_cols=100 Identities=12% Similarity=0.062 Sum_probs=49.9
Q ss_pred CEEEeeCChHHHHHHHHH--HHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc----h------HHHHHhhh-
Q 006152 456 DVLLTYGSSSAVEMILQH--AHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI----N------AISYIIHE- 522 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~--A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D----s------Av~~~M~~- 522 (658)
.+++|.|.+.++..+++- ....| -+|++. .|.+.+.. ..+...|..+..+.- + .+-..+.+
T Consensus 97 ~i~~t~g~~~a~~~~~~~~~~~~~g--d~vl~~--~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 170 (397)
T 3fsl_A 97 ATIQTLGGSGALKVGADFLKRYFPE--SGVWVS--DPTWENHV--AIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTL 170 (397)
T ss_dssp EEEEESHHHHHHHHHHHHHHHHCTT--CCEEEE--SSCCHHHH--HHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTC
T ss_pred EEEEcCCcHHHHHHHHHHHHhcCCC--CeEEEe--CCCchhHH--HHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhC
Confidence 567777777777655432 22233 345554 36665543 334457887777643 2 23333331
Q ss_pred --ccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 523 --VTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 523 --Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
-+++++=..---..|.+++.----.++-+|++|++.+++
T Consensus 171 ~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 211 (397)
T 3fsl_A 171 QAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFL 211 (397)
T ss_dssp CTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEE
Confidence 123332221112223333322223677788888887765
No 185
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=41.31 E-value=43 Score=34.05 Aligned_cols=91 Identities=12% Similarity=0.069 Sum_probs=56.5
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHh-----hhccEEEEc
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYII-----HEVTRVFLG 529 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M-----~~Vd~VlvG 529 (658)
.+.|+..|++..-..+.+.+.++| . |+++|..|.. +. |.+.|+++.+- |..-...+ .++|.|++-
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g--~-v~vid~~~~~-----~~-~~~~~~~~i~g-d~~~~~~L~~a~i~~a~~vi~~ 184 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSE--V-FVLAEDENVR-----KK-VLRSGANFVHG-DPTRVSDLEKANVRGARAVIVD 184 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSC--E-EEEESCGGGH-----HH-HHHTTCEEEES-CTTSHHHHHHTCSTTEEEEEEC
T ss_pred cCCEEEECCcHHHHHHHHHHHhCC--c-EEEEeCChhh-----hh-HHhCCcEEEEe-CCCCHHHHHhcChhhccEEEEc
Confidence 467899999887666666666555 3 7888876642 33 56678775443 43323333 356777654
Q ss_pred ceeEecCCCeecccchHHHHHHHhhCCCCeEeecc
Q 006152 530 ASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCE 564 (658)
Q Consensus 530 AdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~ae 564 (658)
.+ +..-+..+++.||+++....+++.
T Consensus 185 ~~---------~d~~n~~~~~~ar~~~~~~~iiar 210 (336)
T 1lnq_A 185 LE---------SDSETIHCILGIRKIDESVRIIAE 210 (336)
T ss_dssp CS---------SHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred CC---------ccHHHHHHHHHHHHHCCCCeEEEE
Confidence 32 234567788999999876454443
No 186
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=41.26 E-value=56 Score=34.59 Aligned_cols=98 Identities=15% Similarity=0.106 Sum_probs=51.4
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHH--HHHHhCCCcEEEEcch---HHHHHhh-hccEEEEc
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLL--RRLVRKGLSCTYTHIN---AISYIIH-EVTRVFLG 529 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La--~eL~~~GI~vT~I~Ds---Av~~~M~-~Vd~VlvG 529 (658)
+.|++-+...++..+|....+.| -+|++.+ |.+.|..-. ..|...|++++++... .+-..+. +..+|++
T Consensus 99 ~~i~~ssGt~Ai~~al~~l~~~G--d~Vi~~~--~~y~~~~~~~~~~l~~~G~~v~~v~~~d~~~le~ai~~~tklV~~- 173 (415)
T 2fq6_A 99 GCVLFPCGAAAVANSILAFIEQG--DHVLMTN--TAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFL- 173 (415)
T ss_dssp EEEEESSHHHHHHHHHHTTCCTT--CEEEEET--TSCHHHHHHHHHTGGGGTCEEEEECTTCGGGGGGGCCTTEEEEEE-
T ss_pred eEEEeCCHHHHHHHHHHHHhCCC--CEEEEeC--CCchHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhhccCCcEEEE-
Confidence 34555333334544444333333 4677654 566665433 2356789999998532 2222332 3334433
Q ss_pred ceeEe-cCCCeecccchHHHHHHHhh--CCCCeEee
Q 006152 530 ASSVL-SNGTVCSRVGTACVAMVAYG--FHIPVLVC 562 (658)
Q Consensus 530 AdaV~-aNG~VvNKiGT~~lAl~Ak~--~~VPVyV~ 562 (658)
+.+. ..|.+. . --.|+-+|++ |+++|+|=
T Consensus 174 -e~~~NptG~v~-d--l~~I~~la~~~~~g~~livD 205 (415)
T 2fq6_A 174 -ESPGSITMEVH-D--VPAIVAAVRSVVPDAIIMID 205 (415)
T ss_dssp -ESSCTTTCCCC-C--HHHHHHHHHHHCTTCEEEEE
T ss_pred -ECCCCCCCEee-c--HHHHHHHHHhhcCCCEEEEE
Confidence 2222 224333 2 2567888999 99988763
No 187
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=40.99 E-value=8.3 Score=40.31 Aligned_cols=76 Identities=16% Similarity=0.245 Sum_probs=44.6
Q ss_pred hccCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEcc
Q 006152 451 KIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGA 530 (658)
Q Consensus 451 ~I~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~VlvGA 530 (658)
.+..|.+|+..|.+..-..+++.|++.| ++|++++..|...+..++ ..-+...+....++-.+.+++|.|..+-
T Consensus 10 ~~~~~k~IlIlG~G~~g~~la~aa~~~G--~~vi~~d~~~~~~~~~~a----d~~~~~~~~d~~~l~~~~~~~dvI~~~~ 83 (389)
T 3q2o_A 10 IILPGKTIGIIGGGQLGRMMALAAKEMG--YKIAVLDPTKNSPCAQVA----DIEIVASYDDLKAIQHLAEISDVVTYEF 83 (389)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSTTCTTTTTC----SEEEECCTTCHHHHHHHHHTCSEEEESC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEeCCCCCchHHhC----CceEecCcCCHHHHHHHHHhCCEeeecc
Confidence 3457889999999987667778887655 577887776654333221 1101111111124555566778777664
Q ss_pred ee
Q 006152 531 SS 532 (658)
Q Consensus 531 da 532 (658)
+.
T Consensus 84 e~ 85 (389)
T 3q2o_A 84 EN 85 (389)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 188
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=40.83 E-value=1.6e+02 Score=29.59 Aligned_cols=99 Identities=17% Similarity=0.173 Sum_probs=52.3
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch------HHHHH---hh-hccE
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN------AISYI---IH-EVTR 525 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds------Av~~~---M~-~Vd~ 525 (658)
.+++|.|.+.++..++..+.+.| -+|++.+ |.+.+.. ..+...|+.+..+... -+..+ +. ++..
T Consensus 93 ~v~~~~g~~~a~~~~~~~~~~~g--d~vl~~~--p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~ 166 (386)
T 1u08_A 93 DITVTAGATEALYAAITALVRNG--DEVICFD--PSYDSYA--PAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRL 166 (386)
T ss_dssp TEEEESSHHHHHHHHHHHHCCTT--CEEEEEE--SCCTTHH--HHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTTEEE
T ss_pred CEEEcCChHHHHHHHHHHhCCCC--CEEEEeC--CCchhHH--HHHHHcCCEEEEeecCcccCcCCHHHHHHhhcccCEE
Confidence 78888888888866666553333 3566654 4455533 3445578888777531 12222 21 3344
Q ss_pred EEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 526 VFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 526 VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
|++- .--...|.++..-=--.|+-+|++|++.+++
T Consensus 167 v~l~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 201 (386)
T 1u08_A 167 VILN-TPHNPSATVWQQADFAALWQAIAGHEIFVIS 201 (386)
T ss_dssp EEEE-SSCTTTCCCCCHHHHHHHHHHHTTSCCEEEE
T ss_pred EEEe-CCCCCCCccCCHHHHHHHHHHHHHcCcEEEE
Confidence 4431 1111223333221114566788899987765
No 189
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=40.73 E-value=1e+02 Score=31.56 Aligned_cols=100 Identities=11% Similarity=0.099 Sum_probs=54.5
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch---------HHHHHh-hhcc
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN---------AISYII-HEVT 524 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds---------Av~~~M-~~Vd 524 (658)
..+++|-|.+.++..+++.+.+.| -+|++. .|.+.|.... +...|..+..+... .+-..+ .++.
T Consensus 110 ~~v~~t~G~~~al~~~~~~l~~~g--d~Vl~~--~p~y~~~~~~--~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~ 183 (404)
T 2o1b_A 110 DEVCILYGTKNGLVAVPTCVINPG--DYVLLP--DPGYTDYLAG--VLLADGKPVPLNLEPPHYLPDWSKVDSQIIDKTK 183 (404)
T ss_dssp TSEEEESSHHHHHHHHHHHHCCTT--CEEEEE--ESCCSSHHHH--HHHTTCEEEEEECCTTTCCCCGGGSCHHHHHHEE
T ss_pred ccEEEcCCcHHHHHHHHHHhcCCC--CEEEEc--CCCchhHHHH--HHHCCCEEEEeccCcccCcCCHHHHHHhhccCce
Confidence 578888888888876666553333 355554 3556554433 34568877776521 121222 3455
Q ss_pred EEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 525 RVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 525 ~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
.|++- .--...|.++..-=--.|+-+|++|++.+++
T Consensus 184 ~v~l~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 219 (404)
T 2o1b_A 184 LIYLT-YPNNPTGSTATKEVFDEAIAKFKGTDTKIVH 219 (404)
T ss_dssp EEEEC-SSCTTTCCCCCHHHHHHHHHHHTTSSCEEEE
T ss_pred EEEEc-CCCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 56552 2111234433221123467788999987765
No 190
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=40.56 E-value=1.7e+02 Score=29.87 Aligned_cols=92 Identities=15% Similarity=0.147 Sum_probs=56.0
Q ss_pred CCEEEeeCCh---HHHHHHHHHHHHc---CCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEc-chHHHHHhhhccEEE
Q 006152 455 GDVLLTYGSS---SAVEMILQHAHEL---GKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTH-INAISYIIHEVTRVF 527 (658)
Q Consensus 455 gdvILT~g~S---saV~~vL~~A~e~---gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~-DsAv~~~M~~Vd~Vl 527 (658)
..+||++|-| ..+...+.++.+. ...+.|++.-.+... ..+...+.+.++++.+.. ..-+..+|..+|.||
T Consensus 180 ~~~ilv~gGs~g~~~~~~~~~~al~~l~~~~~~~vi~~~G~~~~--~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDlvI 257 (365)
T 3s2u_A 180 RVNLLVLGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQHA--EITAERYRTVAVEADVAPFISDMAAAYAWADLVI 257 (365)
T ss_dssp CCEEEECCTTTTCSHHHHHHHHHHHTSCTTTCCEEEEECCTTTH--HHHHHHHHHTTCCCEEESCCSCHHHHHHHCSEEE
T ss_pred CcEEEEECCcCCccccchhhHHHHHhcccccceEEEEecCcccc--ccccceecccccccccccchhhhhhhhccceEEE
Confidence 4578888765 2344555555542 334566655444332 344566778888887764 234677889999886
Q ss_pred EcceeEecCCCeecccchHHHHHHHhhCCCCeEee
Q 006152 528 LGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVC 562 (658)
Q Consensus 528 vGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~ 562 (658)
. +.|...++- +-.+|+|++++
T Consensus 258 ~-------------raG~~Tv~E-~~a~G~P~Ili 278 (365)
T 3s2u_A 258 C-------------RAGALTVSE-LTAAGLPAFLV 278 (365)
T ss_dssp E-------------CCCHHHHHH-HHHHTCCEEEC
T ss_pred e-------------cCCcchHHH-HHHhCCCeEEe
Confidence 3 345444442 44579998865
No 191
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=40.39 E-value=62 Score=32.39 Aligned_cols=96 Identities=13% Similarity=0.126 Sum_probs=52.9
Q ss_pred hccCCCEEEeeCChHHHHHHHHHH-HHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch--------HHHHHhh
Q 006152 451 KIRDGDVLLTYGSSSAVEMILQHA-HELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN--------AISYIIH 521 (658)
Q Consensus 451 ~I~dgdvILT~g~SsaV~~vL~~A-~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds--------Av~~~M~ 521 (658)
++....+|+|-+.+.++..+|..+ ...| -+|++. .|.+.+.. ..+...|+.+.++... .+-..+.
T Consensus 50 ~~~~~~~~~~~~gt~a~~~~~~~~~~~~g--d~v~~~--~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~ 123 (374)
T 3uwc_A 50 LHNAPHAIGVGTGTDALAMSFKMLNIGAG--DEVITC--ANTFIASV--GAIVQAGATPVLVDSENGYVIDPEKIEAAIT 123 (374)
T ss_dssp HTTCSEEEEESCHHHHHHHHHHHTTCCTT--CEEEEE--SSSCHHHH--HHHHHTTCEEEEECBCTTSSBCGGGTGGGCC
T ss_pred HhCCCcEEEeCCHHHHHHHHHHHcCCCCC--CEEEEC--CCccHHHH--HHHHHcCCEEEEEecCCCCCcCHHHHHHhCC
Confidence 343336677776667776655554 3333 356654 35555543 3356679988888643 1111121
Q ss_pred hccEEEEcceeEecCCCeecccch----HHHHHHHhhCCCCeEee
Q 006152 522 EVTRVFLGASSVLSNGTVCSRVGT----ACVAMVAYGFHIPVLVC 562 (658)
Q Consensus 522 ~Vd~VlvGAdaV~aNG~VvNKiGT----~~lAl~Ak~~~VPVyV~ 562 (658)
+=.++|+ +.|..|+ -.|+-+|++|++.+++=
T Consensus 124 ~~~~~v~----------~~n~~G~~~~~~~i~~~~~~~~~~li~D 158 (374)
T 3uwc_A 124 DKTKAIM----------PVHYTGNIADMPALAKIAKKHNLHIVED 158 (374)
T ss_dssp TTEEEEC----------CBCGGGCCCCHHHHHHHHHHTTCEEEEE
T ss_pred CCceEEE----------EeCCcCCcCCHHHHHHHHHHcCCEEEEe
Confidence 1123333 2334443 45777899999988763
No 192
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=40.24 E-value=2e+02 Score=28.94 Aligned_cols=96 Identities=8% Similarity=-0.030 Sum_probs=53.5
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc---hHHHHHhhh-----ccEEE
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI---NAISYIIHE-----VTRVF 527 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D---sAv~~~M~~-----Vd~Vl 527 (658)
++++|.|.+.++..+++.+.+.| -.|++. .|.+.+... .+...|..+..+.. ..+-..+.+ +..|+
T Consensus 105 ~v~~~~ggt~a~~~~~~~~~~~g--d~V~~~--~p~~~~~~~--~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~v~ 178 (398)
T 3a2b_A 105 AAILFSTGFQSNLGPLSCLMGRN--DYILLD--ERDHASIID--GSRLSFSKVIKYGHNNMEDLRAKLSRLPEDSAKLIC 178 (398)
T ss_dssp EEEEESSHHHHHHHHHHHSSCTT--CEEEEE--TTCCHHHHH--HHHHSSSEEEEECTTCHHHHHHHHHTSCSSSCEEEE
T ss_pred cEEEECCHHHHHHHHHHHHhCCC--CEEEEC--CccCHHHHH--HHHHcCCceEEeCCCCHHHHHHHHHhhccCCceEEE
Confidence 67777777777766665553333 345554 356655433 34457888777753 333444443 33444
Q ss_pred EcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 528 LGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 528 vGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
+.. .-...|.+.. --.|+-+|++|++.+++
T Consensus 179 ~~~-~~nptG~~~~---~~~l~~~~~~~~~~li~ 208 (398)
T 3a2b_A 179 TDG-IFSMEGDIVN---LPELTSIANEFDAAVMV 208 (398)
T ss_dssp EES-BCTTTCCBCC---HHHHHHHHHHHTCEEEE
T ss_pred EeC-CCCCCCCccC---HHHHHHHHHHcCcEEEE
Confidence 321 1122354443 35677788999987665
No 193
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=40.24 E-value=2e+02 Score=28.91 Aligned_cols=99 Identities=13% Similarity=0.076 Sum_probs=56.4
Q ss_pred CCEEEeeCC-hHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc--------hHHHHHhh--hc
Q 006152 455 GDVLLTYGS-SSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI--------NAISYIIH--EV 523 (658)
Q Consensus 455 gdvILT~g~-SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D--------sAv~~~M~--~V 523 (658)
.+.|+..+. +.++..++..+.+. .-+|++.+ |.+-|..+...+...|+.+..+.. ..+-..+. ++
T Consensus 64 ~~~v~~~~sgt~al~~~~~~~~~~--gd~Vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~ 139 (411)
T 3nnk_A 64 RWTMLVDGTSRAGIEAILVSAIRP--GDKVLVPV--FGRFGHLLCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRP 139 (411)
T ss_dssp SEEEEEESCHHHHHHHHHHHHCCT--TCEEEEEE--CSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCC
T ss_pred CcEEEECCCcHHHHHHHHHHhcCC--CCEEEEec--CCchHHHHHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhCCC
Confidence 333444444 55676666665433 34666654 555555555667778988887752 23444444 46
Q ss_pred cEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 524 TRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 524 d~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
..|++-. .=...|.+.. + -.|+-+|++|++.+++
T Consensus 140 ~~v~~~~-~~nptG~~~~-l--~~i~~l~~~~~~~li~ 173 (411)
T 3nnk_A 140 RLLLTVQ-GDTSTTMLQP-L--AELGEICRRYDALFYT 173 (411)
T ss_dssp SEEEEES-EETTTTEECC-C--TTHHHHHHHHTCEEEE
T ss_pred eEEEEeC-CCCCcceecc-H--HHHHHHHHHcCCEEEE
Confidence 6666532 2223344433 2 2577788999987776
No 194
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=40.18 E-value=31 Score=35.62 Aligned_cols=107 Identities=16% Similarity=0.187 Sum_probs=71.3
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhC-CCcEEEEcchHHHHHhhhccEEEEccee
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRK-GLSCTYTHINAISYIIHEVTRVFLGASS 532 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~-GI~vT~I~DsAv~~~M~~Vd~VlvGAda 532 (658)
+-|.++.+-....+..++.++.+.|.+.-|++.+.-+..+-.++...+.+. |+. +|-.|.++.+-+...+...-...
T Consensus 71 ~vD~avI~vP~~~~~~~~~e~i~~Gi~~iv~~t~G~~~~~~~~l~~~a~~~~gi~--liGPnc~Gii~p~~~~~~~~~~~ 148 (305)
T 2fp4_A 71 GATASVIYVPPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGKTR--LIGPNCPGVINPGECKIGIMPGH 148 (305)
T ss_dssp CCCEEEECCCHHHHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHTTCSSCE--EECSSSCEEEETTTEEEESSCGG
T ss_pred CCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHhcCCcE--EEeCCCCeEecccccceeecccc
Confidence 347777777777777889999998887767777777665555677777777 865 67677766665543222211122
Q ss_pred EecCC--CeecccchHHHHHH--HhhCCCCeEee
Q 006152 533 VLSNG--TVCSRVGTACVAMV--AYGFHIPVLVC 562 (658)
Q Consensus 533 V~aNG--~VvNKiGT~~lAl~--Ak~~~VPVyV~ 562 (658)
+..-| +++++.||+..+++ +...++.|--+
T Consensus 149 ~~~~G~va~vSqSG~l~~~~~~~~~~~g~G~S~~ 182 (305)
T 2fp4_A 149 IHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 182 (305)
T ss_dssp GCCEEEEEEEESCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCEEEEecchHHHHHHHHHHHhcCCCeeEE
Confidence 23334 57899999988876 56677777543
No 195
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=40.05 E-value=77 Score=31.92 Aligned_cols=102 Identities=17% Similarity=0.094 Sum_probs=53.8
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch----------HHHHHhh-h
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN----------AISYIIH-E 522 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds----------Av~~~M~-~ 522 (658)
...+++|.|.+.++..+++.+.+.| -+|++.+ |.+.+... .+...|+.+..+... .+-..+. +
T Consensus 90 ~~~v~~~~g~~~a~~~~~~~~~~~g--d~vl~~~--~~~~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 163 (388)
T 1j32_A 90 ADNILVTNGGKQSIFNLMLAMIEPG--DEVIIPA--PFWVSYPE--MVKLAEGTPVILPTTVETQFKVSPEQIRQAITPK 163 (388)
T ss_dssp GGGEEEESHHHHHHHHHHHHHCCTT--CEEEEES--SCCTHHHH--HHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTT
T ss_pred hhhEEEcCCHHHHHHHHHHHhcCCC--CEEEEcC--CCChhHHH--HHHHcCCEEEEecCCcccCCCCCHHHHHHhcCcC
Confidence 3467888887788877666664444 3566543 55555433 344578888777532 1222222 2
Q ss_pred ccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEee
Q 006152 523 VTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVC 562 (658)
Q Consensus 523 Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~ 562 (658)
+..|++ ..--...|.++.+-=--.++-+|++|++.+++=
T Consensus 164 ~~~v~~-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 202 (388)
T 1j32_A 164 TKLLVF-NTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSD 202 (388)
T ss_dssp EEEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred ceEEEE-eCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 333433 111111233332222235666788999887763
No 196
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=40.01 E-value=1.1e+02 Score=31.47 Aligned_cols=103 Identities=17% Similarity=0.169 Sum_probs=54.8
Q ss_pred ccCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHH-hCCCcEEEEcch----------HHHHHh
Q 006152 452 IRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLV-RKGLSCTYTHIN----------AISYII 520 (658)
Q Consensus 452 I~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~-~~GI~vT~I~Ds----------Av~~~M 520 (658)
+....+++|-|.+.++..+++.+.+.| -+|++. +|.+.|... .+. ..|+.+..+... .+-..+
T Consensus 106 ~~~~~i~~~~G~~~ai~~~~~~~~~~g--d~Vl~~--~p~y~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l 179 (428)
T 1iay_A 106 FDPERVVMAGGATGANETIIFCLADPG--DAFLVP--SPYYPAFNR--DLRWRTGVQLIPIHCESSNNFKITSKAVKEAY 179 (428)
T ss_dssp CCTTSCEEEEHHHHHHHHHHHHHCCTT--CEEEEE--SSCCTTHHH--HTTTTTCCEEEEECCCTTTTTCCCHHHHHHHH
T ss_pred CChhhEEEccChHHHHHHHHHHhCCCC--CeEEEc--cCCCcchHH--HHHHhcCCEEEEeecCCccCCcCCHHHHHHHH
Confidence 334567888887778766665554333 356664 466665432 122 468887777521 222233
Q ss_pred h-------hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 521 H-------EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 521 ~-------~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
. ++..|++ +.--...|.++.+-=--.++-+|+.|++.+++
T Consensus 180 ~~~~~~~~~~~~v~l-~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 226 (428)
T 1iay_A 180 ENAQKSNIKVKGLIL-TNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVC 226 (428)
T ss_dssp HHHHHTTCCEEEEEE-ESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHhcCCceEEEEE-cCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEE
Confidence 3 2344444 22212235444332234466678889987765
No 197
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=39.90 E-value=1.4e+02 Score=29.77 Aligned_cols=109 Identities=13% Similarity=0.036 Sum_probs=60.0
Q ss_pred CCCEEEeeCChHHHHHHH-HHHHHcCCeeEEEEeCCCCCchHHHH---HHHHH---hCCCcEEEEcc----hHHHHHhhh
Q 006152 454 DGDVLLTYGSSSAVEMIL-QHAHELGKQFRVVIVDSRPKHEGKLL---LRRLV---RKGLSCTYTHI----NAISYIIHE 522 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL-~~A~e~gk~f~ViV~ESRP~~EG~~L---a~eL~---~~GI~vT~I~D----sAv~~~M~~ 522 (658)
.+.+||..|.+.-|...| +.+.++| .+|+++.-++......+ ..++. ..++.+.. .| ..+..++..
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Dl~d~~~~~~~~~~ 102 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLD--QKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQ-GDIRNLDDCNNACAG 102 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEE-CCTTSHHHHHHHHTT
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCCccchhhHHHHhhhcccccCCceEEEE-CCCCCHHHHHHHhcC
Confidence 456788888765554444 3444555 57777764443211122 11111 23443322 23 345666777
Q ss_pred ccEEEEcceeEecC---CC-----eecccchHHHHHHHhhCCCCeEeeccc
Q 006152 523 VTRVFLGASSVLSN---GT-----VCSRVGTACVAMVAYGFHIPVLVCCEA 565 (658)
Q Consensus 523 Vd~VlvGAdaV~aN---G~-----VvNKiGT~~lAl~Ak~~~VPVyV~aet 565 (658)
+|.||--|-..... .+ -+|-.||..++-+|+.+++.-+|.+.+
T Consensus 103 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 153 (352)
T 1sb8_A 103 VDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 153 (352)
T ss_dssp CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 88777655322100 01 147789999999999999876665444
No 198
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=39.58 E-value=1.1e+02 Score=31.09 Aligned_cols=100 Identities=13% Similarity=0.127 Sum_probs=54.1
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch----------------HHHH
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN----------------AISY 518 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds----------------Av~~ 518 (658)
..+++|.|.+.++..++..+.+.| -+|++. .|.+.+.. ..+...|..+..+... -+..
T Consensus 86 ~~i~~~~g~~~a~~~~~~~~~~~g--d~vl~~--~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~ 159 (410)
T 3e2y_A 86 EEILVAVGAYGSLFNSIQGLVDPG--DEVIIM--VPFYDCYE--PMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRE 159 (410)
T ss_dssp TSEEEESHHHHHHHHHHHHHCCTT--CEEEEE--ESCCTTHH--HHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHH
T ss_pred CCEEEeCCcHHHHHHHHHHhcCCC--CEEEEe--CCCchhhH--HHHHHcCCEEEEEeccccccccccccccCCcCCHHH
Confidence 578888888888877666654434 355554 45554433 2344568777666422 1222
Q ss_pred Hhh----hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 519 IIH----EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 519 ~M~----~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
+-+ ++..|++- .--...|.++.+----.++-+|+.|++.+++
T Consensus 160 l~~~~~~~~~~v~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 205 (410)
T 3e2y_A 160 LESKFSSKTKAIILN-TPHNPLGKVYTRQELQVIADLCVKHDTLCIS 205 (410)
T ss_dssp HHTTCCTTEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHhhcCCCceEEEEe-CCCCCCCcCcCHHHHHHHHHHHHHcCcEEEE
Confidence 222 34444432 1111234444333334566788999987775
No 199
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=39.37 E-value=25 Score=34.65 Aligned_cols=86 Identities=14% Similarity=0.111 Sum_probs=50.9
Q ss_pred CCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchH---HHHHhhhccEEEEcceeEecCCCe-ecccchHHHHHH--
Q 006152 478 GKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINA---ISYIIHEVTRVFLGASSVLSNGTV-CSRVGTACVAMV-- 551 (658)
Q Consensus 478 gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsA---v~~~M~~Vd~VlvGAdaV~aNG~V-vNKiGT~~lAl~-- 551 (658)
....+|.|+.-.|...-..+...|...|++++++.-.. +...+.++|.+|+.--.....+.. ..... ..+.++
T Consensus 10 ~~~~~~~~i~~~~~~~~~~i~~~l~~~G~~v~v~~~~~~~~~~~~l~~~Dglil~GG~~~~~~~~~~~~l~-~~~~~i~~ 88 (239)
T 1o1y_A 10 HHHVRVLAIRHVEIEDLGMMEDIFREKNWSFDYLDTPKGEKLERPLEEYSLVVLLGGYMGAYEEEKYPFLK-YEFQLIEE 88 (239)
T ss_dssp CCCCEEEEECSSTTSSCTHHHHHHHHTTCEEEEECGGGTCCCSSCGGGCSEEEECCCSCCTTCTTTCTHHH-HHHHHHHH
T ss_pred cceeEEEEEECCCCCCchHHHHHHHhCCCcEEEeCCcCccccccchhcCCEEEECCCCccccCCccChhHH-HHHHHHHH
Confidence 45688999988887665667788999999998765332 122345788887732111111111 11111 223333
Q ss_pred HhhCCCCeEeecc
Q 006152 552 AYGFHIPVLVCCE 564 (658)
Q Consensus 552 Ak~~~VPVyV~ae 564 (658)
|...++|++-+|=
T Consensus 89 ~~~~~~PiLGIC~ 101 (239)
T 1o1y_A 89 ILKKEIPFLGICL 101 (239)
T ss_dssp HHHHTCCEEEETH
T ss_pred HHHCCCCEEEEch
Confidence 3356899997765
No 200
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=39.26 E-value=74 Score=35.56 Aligned_cols=113 Identities=15% Similarity=0.303 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHHHHhcCcccccH-HHHHHHHHHHHHh-c-------------------CCCCCHHHHHHHHHHHHHHH
Q 006152 374 SRDLTAKISSYVSFLIDCRPLSVSM-GNAIRFLKSQIAK-I-------------------PISLSESEAKATLHSDIERF 432 (658)
Q Consensus 374 ~r~L~~~L~~~i~~L~~aRPtsVsm-gNAIr~lk~~I~~-~-------------------~~~~~~~eaKe~L~e~Id~f 432 (658)
..+|.+.|...-+...+-+|+|+.+ ||+.+-+-+.++. + +.+++.+|+.+.+.++-+.|
T Consensus 216 ~~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~DlvtDQTSaHdp~~GY~P~g~t~ee~~~l~~~dp~~~ 295 (557)
T 1uwk_A 216 ATDLDDALVRIAKYTAEGKAISIALHGNAAEILPELVKRGVRPDMVTDQTSAHDPLNGYLPAGWTWEQYRDRAQTEPAAV 295 (557)
T ss_dssp CSSHHHHHHHHHHHHHTTCCCEEEEESCHHHHHHHHHHHTCCCSEECCCSCTTCTTTSCCCTTCCHHHHHHHHHHCHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCCCCccccCcccccCCCCCCHHHHHHHHHhCHHHH
Confidence 4567777777777888899999875 8998766655544 1 11347899999999888888
Q ss_pred HHHHHHHHHHHHHHHHH---HhccCCCEEEeeCCh-----------------HHHHHHHHHHHHcCC-eeEEEEeCCCC
Q 006152 433 INEKIILADRVIVKHAV---TKIRDGDVLLTYGSS-----------------SAVEMILQHAHELGK-QFRVVIVDSRP 490 (658)
Q Consensus 433 i~E~i~~a~~~Ia~~a~---~~I~dgdvILT~g~S-----------------saV~~vL~~A~e~gk-~f~ViV~ESRP 490 (658)
.+. +.+.|..|.. ++-..|..+.-|||+ +-|..+|+-.+..|+ .||=+|+-..|
T Consensus 296 ~~~----~~~Sm~rhv~Am~~~~~~G~~~fDYGN~~r~~a~~aG~~~aF~~P~fV~~~irPlF~~G~GPFRWvalSGdp 370 (557)
T 1uwk_A 296 VKA----AKQSMAVHVQAMLDFQKQGVPTFDYGNNIRQMAKEEGVADAFDFPGFVPAYIRPLFCRGVGPFRWAALSGEA 370 (557)
T ss_dssp HHH----HHHHHHHHHHHHHHHHHTTCCBCBCSSCHHHHHHHTTCTTGGGSCBHHHHTTHHHHTTTCBCEEEEETTCCH
T ss_pred HHH----HHHHHHHHHHHHHHHHHCCCeeeeccHHHHHHHHhCChhhcCCCCccHHHHhhhHhhcCCCCceeEEcCCCH
Confidence 754 5566666654 445678888888886 234455555555665 47766666555
No 201
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=39.20 E-value=3e+02 Score=27.26 Aligned_cols=99 Identities=17% Similarity=0.313 Sum_probs=55.8
Q ss_pred CCEEEeeCChHHHHHHHHHH-HHcCCeeEEEEeCCCCCchHHHHH-HH-HHhCCCcEEEEcch-------HHHHHhh---
Q 006152 455 GDVLLTYGSSSAVEMILQHA-HELGKQFRVVIVDSRPKHEGKLLL-RR-LVRKGLSCTYTHIN-------AISYIIH--- 521 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A-~e~gk~f~ViV~ESRP~~EG~~La-~e-L~~~GI~vT~I~Ds-------Av~~~M~--- 521 (658)
..+++|.|.+.++..+++.+ .+.| -+|++. .|.+.+.... .. ....|+.+..+... -+..+-.
T Consensus 77 ~~v~~~~g~t~a~~~~~~~~~~~~g--d~vl~~--~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 152 (390)
T 1elu_A 77 NTITITDNVTTGCDIVLWGLDWHQG--DEILLT--DCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLG 152 (390)
T ss_dssp GGEEEESSHHHHHHHHHHHSCCCTT--CEEEEE--TTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCC
T ss_pred HHEEEeCChHHHHHHHHhCCCCCCC--CEEEEe--cCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcC
Confidence 36788888888886666655 3333 456664 4667665543 23 34568888887632 1222222
Q ss_pred -hccEEEEcceeEecCCCeecccchHHHHHHHh----hCCCCeEe
Q 006152 522 -EVTRVFLGASSVLSNGTVCSRVGTACVAMVAY----GFHIPVLV 561 (658)
Q Consensus 522 -~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak----~~~VPVyV 561 (658)
++..|++ ..--...|.++. --.|+-+|+ .|++.+++
T Consensus 153 ~~~~~v~~-~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~li~ 193 (390)
T 1elu_A 153 PKTRLVIL-SHLLWNTGQVLP---LAEIMAVCRRHQGNYPVRVLV 193 (390)
T ss_dssp TTEEEEEE-ESBCTTTCCBCC---HHHHHHHHHHCCSSSCCEEEE
T ss_pred CCceEEEE-eccccCCceecC---HHHHHHHHhhhhhhcCcEEEE
Confidence 3334433 222223455555 346777888 88887665
No 202
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=39.15 E-value=1.6e+02 Score=28.89 Aligned_cols=62 Identities=10% Similarity=0.007 Sum_probs=36.0
Q ss_pred HHHHhCCCc---EEEEcchHHHHHhh-----hccEEEEcceeEecCCCeec-ccchHHHHHHHhhCCCCeEeecc
Q 006152 499 RRLVRKGLS---CTYTHINAISYIIH-----EVTRVFLGASSVLSNGTVCS-RVGTACVAMVAYGFHIPVLVCCE 564 (658)
Q Consensus 499 ~eL~~~GI~---vT~I~DsAv~~~M~-----~Vd~VlvGAdaV~aNG~VvN-KiGT~~lAl~Ak~~~VPVyV~ae 564 (658)
..+.+.|++ +.+...+..-.++. ++|++++|+.. .|.+-. -.|+..-. +.++-.+||+|+=+
T Consensus 235 ~~~~~~~~~~~~~~v~~g~~~~~I~~~a~~~~~dLiV~G~~g---~~~~~~~~~Gsv~~~-vl~~~~~pVLvv~~ 305 (319)
T 3olq_A 235 ELRQKFSIPEEKTHVKEGLPEQVIPQVCEELNAGIVVLGILG---RTGLSAAFLGNTAEQ-LIDHIKCDLLAIKP 305 (319)
T ss_dssp HHHHHTTCCGGGEEEEESCHHHHHHHHHHHTTEEEEEEECCS---CCSTHHHHHHHHHHH-HHTTCCSEEEEECC
T ss_pred HHHHHhCCCcccEEEecCCcHHHHHHHHHHhCCCEEEEeccC---ccCCccccccHHHHH-HHhhCCCCEEEECC
Confidence 344567774 44555544444443 68999999864 222221 23443333 44667899999844
No 203
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=39.12 E-value=57 Score=32.53 Aligned_cols=99 Identities=19% Similarity=0.108 Sum_probs=55.2
Q ss_pred CCCEEEeeCChHHHHHHH-HHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEc--c-hHHHHHhhhccEEEEc
Q 006152 454 DGDVLLTYGSSSAVEMIL-QHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTH--I-NAISYIIHEVTRVFLG 529 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL-~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~--D-sAv~~~M~~Vd~VlvG 529 (658)
.+.+||..|-+.-|..-| +.+.++| ++|+++.-++.. .++.+.... | ..+..++..+|.||--
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G--~~V~~~~r~~~~-----------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 84 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQG--RTVRGFDLRPSG-----------TGGEEVVGSLEDGQALSDAIMGVSAVLHL 84 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTT--CCEEEEESSCCS-----------SCCSEEESCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCC--CEEEEEeCCCCC-----------CCccEEecCcCCHHHHHHHHhCCCEEEEC
Confidence 345677777765544333 3444455 567776554432 344443321 1 3455666778887765
Q ss_pred ceeEecCCC------eecccchHHHHHHHhhCCCCeEeeccc
Q 006152 530 ASSVLSNGT------VCSRVGTACVAMVAYGFHIPVLVCCEA 565 (658)
Q Consensus 530 AdaV~aNG~------VvNKiGT~~lAl~Ak~~~VPVyV~aet 565 (658)
|-....+.. -.|-.||..+.-+|+.+++.-+|.+-+
T Consensus 85 A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 85 GAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp CCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 432211111 136679999999999999866665444
No 204
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=39.04 E-value=72 Score=33.09 Aligned_cols=102 Identities=19% Similarity=0.236 Sum_probs=56.6
Q ss_pred cCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch-------HHHHHhh----
Q 006152 453 RDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN-------AISYIIH---- 521 (658)
Q Consensus 453 ~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds-------Av~~~M~---- 521 (658)
....+++|.|.+.++..+++.+.+.| -+|++. .|.+.+.. ..+...|+.+..+... -+..+.+
T Consensus 117 ~~~~v~~t~g~t~al~~~~~~l~~~g--d~vl~~--~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 190 (427)
T 3dyd_A 117 EAKDVILTSGCSQAIDLCLAVLANPG--QNILVP--RPGFSLYK--TLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDE 190 (427)
T ss_dssp CGGGEEEESSHHHHHHHHHHHHCCTT--CEEEEE--ESCCTHHH--HHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCT
T ss_pred ChHHEEEecCcHHHHHHHHHHhcCCC--CEEEEc--CCCchhHH--HHHHHcCCEEEEEecccccCCCCCHHHHHHHhcc
Confidence 34578888888888877666654333 356654 36666643 3345678887766421 1222222
Q ss_pred hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 522 EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 522 ~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
+...|++- ..--..|.++.+----.|+-+|++|++.+++
T Consensus 191 ~~~~v~i~-~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~ 229 (427)
T 3dyd_A 191 KTACLIVN-NPSNPCGSVFSKRHLQKILAVAARQCVPILA 229 (427)
T ss_dssp TEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEE-CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 22233321 1111234444333345677789999998876
No 205
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=38.99 E-value=96 Score=31.45 Aligned_cols=102 Identities=16% Similarity=0.169 Sum_probs=52.8
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc-------hHHHHHhh--hcc
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI-------NAISYIIH--EVT 524 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D-------sAv~~~M~--~Vd 524 (658)
...+++|.|.+.++..+++.+.+.| -+|++. .|.+.|... .+...|..+..+.. ..+-..+. ++.
T Consensus 91 ~~~v~~~~g~~~al~~~~~~~~~~g--d~Vl~~--~p~y~~~~~--~~~~~g~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 164 (397)
T 2zyj_A 91 PEEVLITTGSQQALDLVGKVFLDEG--SPVLLE--APSYMGAIQ--AFRLQGPRFLTVPAGEEGPDLDALEEVLKRERPR 164 (397)
T ss_dssp GGGEEEESHHHHHHHHHHHHHCCTT--CEEEEE--ESCCHHHHH--HHHTTCCEEEEEEEETTEECHHHHHHHHHHCCCS
T ss_pred hhhEEEeccHHHHHHHHHHHhCCCC--CEEEEe--CCCcHHHHH--HHHHcCCEEEecCcCCCCCCHHHHHHHHhhcCCe
Confidence 3467778777777766665543333 345553 366666443 34456877766642 22333343 344
Q ss_pred EEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 525 RVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 525 ~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
.|++=..--...|.++..-=--.++-+|++|++.+++
T Consensus 165 ~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~ 201 (397)
T 2zyj_A 165 FLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVE 201 (397)
T ss_dssp CEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 4433111112224333221112567788889988776
No 206
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=38.93 E-value=1.8e+02 Score=30.87 Aligned_cols=97 Identities=16% Similarity=0.201 Sum_probs=52.1
Q ss_pred EEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHH-HH-HHHhCCCcEEEEcchH---HHHHhhhccEEEEcce
Q 006152 457 VLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLL-LR-RLVRKGLSCTYTHINA---ISYIIHEVTRVFLGAS 531 (658)
Q Consensus 457 vILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~L-a~-eL~~~GI~vT~I~DsA---v~~~M~~Vd~VlvGAd 531 (658)
.|++-+.+.++..+|..+.+.| -+|++. .|.+.|..- .. .+...|+.++++...- +...+..=+++|+ .+
T Consensus 100 ~v~~~sG~~Ai~~al~al~~~G--d~Vi~~--~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~l~~ai~~~t~~v~-~e 174 (430)
T 3ri6_A 100 VLALGSGMAAISTAILTLARAG--DSVVTT--DRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLAVEHACDETTKLLF-LE 174 (430)
T ss_dssp EEEESCHHHHHHHHHHHHCCTT--CEEEEE--TTCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHCCTTEEEEE-EE
T ss_pred EEEECCHHHHHHHHHHHHhCCC--CEEEEc--CCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhhCCCCeEEE-EE
Confidence 3444333445555555443333 456554 355655443 32 6778899999997433 3333332233333 22
Q ss_pred eE-ecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 532 SV-LSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 532 aV-~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
.. -..|.+.. --.|+-+|++|+++++|
T Consensus 175 ~p~NptG~~~d---l~~i~~la~~~g~~liv 202 (430)
T 3ri6_A 175 TISNPQLQVAD---LEALSKVVHAKGIPLVV 202 (430)
T ss_dssp SSCTTTCCCCC---HHHHHHHHHTTTCCEEE
T ss_pred CCCCCCCeecC---HHHHHHHHHHcCCEEEE
Confidence 22 22344432 23677889999999886
No 207
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=38.86 E-value=73 Score=32.04 Aligned_cols=22 Identities=9% Similarity=0.147 Sum_probs=16.6
Q ss_pred HHHHHHhhCCCCeEeecccccc
Q 006152 547 CVAMVAYGFHIPVLVCCEAYKF 568 (658)
Q Consensus 547 ~lAl~Ak~~~VPVyV~aetyKf 568 (658)
...++|+..+||++.++..+-+
T Consensus 115 ~~~~aA~~~giP~v~~~~~~~~ 136 (402)
T 3ia7_A 115 AGRLLAARWDRPAVRLTGGFAA 136 (402)
T ss_dssp HHHHHHHHHTCCEEEEESSCCC
T ss_pred HHHHHHHhhCCCEEEEeccccc
Confidence 3567889999999988765543
No 208
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=38.86 E-value=21 Score=33.85 Aligned_cols=74 Identities=18% Similarity=0.214 Sum_probs=41.9
Q ss_pred EEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEcceeEecCCCeecccchHH----HHHHHhhCCC
Q 006152 482 RVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTAC----VAMVAYGFHI 557 (658)
Q Consensus 482 ~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~----lAl~Ak~~~V 557 (658)
+|.|+|---.+- ..+.+.|.+.|++++++.|.. .+..+|.||+ .-|+-....+-.. +.-.+.+.++
T Consensus 4 ~I~iiD~g~~n~-~si~~al~~~G~~~~v~~~~~---~l~~~D~lil------PG~g~~~~~~~~~~~~~~i~~~~~~~~ 73 (211)
T 4gud_A 4 NVVIIDTGCANI-SSVKFAIERLGYAVTISRDPQ---VVLAADKLFL------PGVGTASEAMKNLTERDLIELVKRVEK 73 (211)
T ss_dssp CEEEECCCCTTH-HHHHHHHHHTTCCEEEECCHH---HHHHCSEEEE------CCCSCHHHHHHHHHHTTCHHHHHHCCS
T ss_pred EEEEEECCCChH-HHHHHHHHHCCCEEEEECCHH---HHhCCCEEEE------CCCCCHHHHHHHHHhcChHHHHHHcCC
Confidence 456666321111 456788999999999887743 4567888866 2212111111110 1223556899
Q ss_pred CeEeeccc
Q 006152 558 PVLVCCEA 565 (658)
Q Consensus 558 PVyV~aet 565 (658)
||+-+|==
T Consensus 74 PvlGIClG 81 (211)
T 4gud_A 74 PLLGICLG 81 (211)
T ss_dssp CEEEETHH
T ss_pred CEEEEchh
Confidence 99976643
No 209
>4eu9_A Succinyl-COA:acetate coenzyme A transferase; HET: COA; 1.48A {Acetobacter aceti} PDB: 4eua_A* 4eu3_A* 4eu4_A* 4eu5_A* 4eu6_A* 4eu7_A* 4eu8_A* 4eub_A* 4euc_A* 4eud_A*
Probab=38.73 E-value=1.3e+02 Score=33.13 Aligned_cols=96 Identities=20% Similarity=0.345 Sum_probs=57.0
Q ss_pred HHHHHHhccCCCEEEeeCCh-----HHHHHHH-HHH---HHcCCe--eEEEEeC-CCCCchHH----------------H
Q 006152 445 VKHAVTKIRDGDVLLTYGSS-----SAVEMIL-QHA---HELGKQ--FRVVIVD-SRPKHEGK----------------L 496 (658)
Q Consensus 445 a~~a~~~I~dgdvILT~g~S-----saV~~vL-~~A---~e~gk~--f~ViV~E-SRP~~EG~----------------~ 496 (658)
++.|+++|++||+|.+.|+. .++...| +++ +..+.. +.++... ..|..++. .
T Consensus 17 aeEAv~~IkdGd~V~~~Gf~~~G~P~~L~~ALa~R~~~~~~~g~~~~i~l~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~ 96 (514)
T 4eu9_A 17 AETASELIKHGDVVGTSGFTGAGYPKEVPKALAQRMEAAHDRGEKYQISLITGASTGPQLDGELAKANGVYFRSPFNTDA 96 (514)
T ss_dssp HHHHHTTCCTTCEEEECCBTTBSCCCHHHHHHHHHHHHHHHTTCCCCEEEECSSCCCTTTHHHHHHTTCEEEEESCCCCH
T ss_pred HHHHHHhCCCCCEEEECCCCCCcCHHHHHHHHHHHHHHhhcCCcceeEEEEEecCcCcccccccccCCCEEEEEecCCCH
Confidence 34567799999999998642 2332333 222 234544 4444332 23444332 1
Q ss_pred HHHHHHhCC-CcEEEEcchHHHHHhh-----hccEEEEcceeEecCCCee
Q 006152 497 LLRRLVRKG-LSCTYTHINAISYIIH-----EVTRVFLGASSVLSNGTVC 540 (658)
Q Consensus 497 La~eL~~~G-I~vT~I~DsAv~~~M~-----~Vd~VlvGAdaV~aNG~Vv 540 (658)
..+++.+.| +...-+..+.++..+. .+|..|+-+..+-.+|.+.
T Consensus 97 ~~R~~i~~G~~~y~p~~ls~~~~~~~~~~~~~iDVAlI~as~~De~Gnis 146 (514)
T 4eu9_A 97 TMRNRINAGETEYFDNHLGQVAGRAVQGNYGKFNIALVEATAITEDGGIV 146 (514)
T ss_dssp HHHHHHHTTSSEECCCCGGGHHHHHHHTTTCCCCEEEEEEEEECTTCCEE
T ss_pred HHHHHHHcCCeeEECccccchHHHHHhccCCCceEEEEEEEcCCCCceEE
Confidence 235566666 3333344566665443 5899999999999999885
No 210
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=38.65 E-value=78 Score=32.30 Aligned_cols=22 Identities=14% Similarity=0.199 Sum_probs=16.7
Q ss_pred HHHHHHhhCCCCeEeecccccc
Q 006152 547 CVAMVAYGFHIPVLVCCEAYKF 568 (658)
Q Consensus 547 ~lAl~Ak~~~VPVyV~aetyKf 568 (658)
...++|+..+||++.+...+-+
T Consensus 131 ~~~~aA~~~giP~v~~~~~~~~ 152 (415)
T 3rsc_A 131 AGQLLAARWRRPAVRLSAAFAS 152 (415)
T ss_dssp HHHHHHHHTTCCEEEEESSCCC
T ss_pred HHHHHHHHhCCCEEEEEecccc
Confidence 3567799999999988765543
No 211
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=37.86 E-value=74 Score=35.52 Aligned_cols=113 Identities=20% Similarity=0.321 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHHHhcCcccccH-HHHHHHHHHHHHhc--------------------CCCCCHHHHHHHHHHHHHHH
Q 006152 374 SRDLTAKISSYVSFLIDCRPLSVSM-GNAIRFLKSQIAKI--------------------PISLSESEAKATLHSDIERF 432 (658)
Q Consensus 374 ~r~L~~~L~~~i~~L~~aRPtsVsm-gNAIr~lk~~I~~~--------------------~~~~~~~eaKe~L~e~Id~f 432 (658)
..+|.+.|...-+...+-+|+|+.+ ||+.+-+-+.++.- +.+++.+|+.+.+.++-+.|
T Consensus 212 ~~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~DlvtDQTSaHdp~~GY~P~g~t~ee~~~l~~~dp~~~ 291 (552)
T 2fkn_A 212 TASIEEALAWAEEAKLAGKPLSIALLGNAAEVHHTLLNRGVKIDIVTDQTSAHDPLIGYVPEGYSLDEADRLRQDTPELY 291 (552)
T ss_dssp ESCHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHTTTCCCSEECCCSCTTCTTTTCCCTTCCHHHHHHHHHHCHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCCCCccccCcccccCCCCCCHHHHHHHHHhCHHHH
Confidence 4567777777777888899999875 89988766655541 11347899999999888888
Q ss_pred HHHHHHHHHHHHHHHHH---HhccCCCEEEeeCCh-----------------HHHHHHHHHHHHcCC-eeEEEEeCCCC
Q 006152 433 INEKIILADRVIVKHAV---TKIRDGDVLLTYGSS-----------------SAVEMILQHAHELGK-QFRVVIVDSRP 490 (658)
Q Consensus 433 i~E~i~~a~~~Ia~~a~---~~I~dgdvILT~g~S-----------------saV~~vL~~A~e~gk-~f~ViV~ESRP 490 (658)
.+. +.+.|.+|.. ++-..|..+.=|||+ +-|..+|+-.+..|+ .||=+|+-..|
T Consensus 292 ~~~----~~~Sm~rhv~am~~~~~~G~~~fDYGN~~r~~a~~aG~~~aF~~P~fV~~~irPlF~~G~GPFRWvalSGdp 366 (552)
T 2fkn_A 292 VRL----AKQSMKKHVEAMLAFQQKGSIVFDYGNNIRQVAKDEGLENAFDFPGFVPAYIRPLFCEGKGPFRWAALSGDP 366 (552)
T ss_dssp HHH----HHHHHHHHHHHHHHHHHHTCEECBCSSCHHHHHHHTTCTTGGGSCBHHHHTTHHHHTTTCCCEEEEETTCCH
T ss_pred HHH----HHHHHHHHHHHHHHHHHCCCeeeeccHHHHHHHHhCChhhcCCCCccHHHHhhhHhhcCCCCceeEEcCCCH
Confidence 754 5566666654 444568888888886 223455555555565 47766666555
No 212
>3cdk_A Succinyl-COA:3-ketoacid-coenzyme A transferase subunit A; CO-expressed complex, hetero-tetramer, structural genomics, PSI-2; 2.59A {Bacillus subtilis}
Probab=37.85 E-value=1.5e+02 Score=29.43 Aligned_cols=44 Identities=18% Similarity=0.104 Sum_probs=30.0
Q ss_pred hccEEEEcceeEecCCCeecc-c-c--hHHHHHHHhhCCCCeEeeccccccccc
Q 006152 522 EVTRVFLGASSVLSNGTVCSR-V-G--TACVAMVAYGFHIPVLVCCEAYKFHER 571 (658)
Q Consensus 522 ~Vd~VlvGAdaV~aNG~VvNK-i-G--T~~lAl~Ak~~~VPVyV~aetyKf~~~ 571 (658)
++|..|+-|...-.+|.+.-. . + ...+|.+|| +|+++.-++.++
T Consensus 151 ~~DVAlI~a~~aD~~Gn~~~~~~~~~~~~~~a~aAk------~VIveVn~~vp~ 198 (241)
T 3cdk_A 151 TGDVAIVKAWKADTMGNLIFRKTARNFNPIAAMAGK------ITIAEAEEIVEA 198 (241)
T ss_dssp CEEEEEEEEEEEETTCCEECCGGGCTTHHHHHHHEE------EEEEEEEEEECT
T ss_pred CCcEEEEEeccCCCCCeEEEecCchhhHHHHHHhCC------EEEEEEeCCCCc
Confidence 589999999999999997665 2 2 244555566 566565444443
No 213
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=37.57 E-value=23 Score=35.86 Aligned_cols=43 Identities=14% Similarity=0.087 Sum_probs=31.4
Q ss_pred EEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEeeccccc
Q 006152 525 RVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYK 567 (658)
Q Consensus 525 ~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~aetyK 567 (658)
....|||+|+-+......--...+.-.|+.+|.-++|++.+..
T Consensus 119 a~~~GAD~ilLi~a~l~~~~l~~l~~~a~~lGl~~lvEv~~~e 161 (251)
T 1i4n_A 119 ASSVGADAILIIARILTAEQIKEIYEAAEELGMDSLVEVHSRE 161 (251)
T ss_dssp HHHTTCSEEEEEGGGSCHHHHHHHHHHHHTTTCEEEEEECSHH
T ss_pred HHHcCCCEEEEecccCCHHHHHHHHHHHHHcCCeEEEEeCCHH
Confidence 3456888888888876663334445578889999999988653
No 214
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=37.40 E-value=93 Score=30.77 Aligned_cols=98 Identities=16% Similarity=0.155 Sum_probs=51.1
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch--------HHHHHhh---h
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN--------AISYIIH---E 522 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds--------Av~~~M~---~ 522 (658)
...+++|.|.+.++..++..+.+.| -+|++.+ |.+.+.. ..+...|+.+..+... .+-..+. +
T Consensus 68 ~~~i~~~~g~~~a~~~~~~~l~~~g--d~vl~~~--~~~~~~~--~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 141 (354)
T 3ly1_A 68 APSILLTAGSSEGIRAAIEAYASLE--AQLVIPE--LTYGDGE--HFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAYSG 141 (354)
T ss_dssp GGGEEEESHHHHHHHHHHHHHCCTT--CEEEEES--SSCTHHH--HHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTCSS
T ss_pred hHHEEEeCChHHHHHHHHHHHhCCC--CeEEECC--CCchHHH--HHHHHcCCEEEEecCCCCCCCCHHHHHHHhccCCC
Confidence 3467777777777766555543333 3566544 6665543 3445678888887532 3444443 4
Q ss_pred ccEEEEcceeEecCCCeecccchHHHHHHHhh--CCCCeEe
Q 006152 523 VTRVFLGASSVLSNGTVCSRVGTACVAMVAYG--FHIPVLV 561 (658)
Q Consensus 523 Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~--~~VPVyV 561 (658)
+..|++ ..--...|.++..- .+.-+++. |++.+++
T Consensus 142 ~~~v~l-~~p~nptG~~~~~~---~l~~l~~~~~~~~~li~ 178 (354)
T 3ly1_A 142 PSIVYL-VNPNNPTGTITPAD---VIEPWIASKPANTMFIV 178 (354)
T ss_dssp CEEEEE-ESSCTTTCCCCCHH---HHHHHHHTCCTTEEEEE
T ss_pred CCEEEE-eCCCCCcCCCcCHH---HHHHHHHhCCCCeEEEE
Confidence 555554 22222233333222 34444444 7766554
No 215
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=37.30 E-value=3.3e+02 Score=27.32 Aligned_cols=72 Identities=11% Similarity=0.030 Sum_probs=39.2
Q ss_pred EEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch---HHHHHhh-----hccEEEEcceeEecCCCeecccchHHHHHHHh
Q 006152 482 RVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN---AISYIIH-----EVTRVFLGASSVLSNGTVCSRVGTACVAMVAY 553 (658)
Q Consensus 482 ~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds---Av~~~M~-----~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak 553 (658)
+|++.+ |.+.+.... +...|+.+..+..+ .+-.++. ++..|++ ...-...|.+.. --.|+-+|+
T Consensus 134 ~Vl~~~--~~~~~~~~~--~~~~g~~~~~v~~~d~~~le~~l~~~~~~~~~~v~~-~~~~nptG~~~~---l~~i~~l~~ 205 (401)
T 2bwn_A 134 IIYSDS--LNHASMIEG--IKRNAGPKRIFRHNDVAHLRELIAADDPAAPKLIAF-ESVYSMDGDFGP---IKEICDIAE 205 (401)
T ss_dssp EEEEET--TCCHHHHHH--HHHSCCCEEEECTTCHHHHHHHHHHSCTTSCEEEEE-ESBCTTTCCBCC---HHHHHHHHH
T ss_pred EEEECc--hhhHHHHHH--HHHcCCeEEEEcCCCHHHHHHHHHhhccCCceEEEE-ecCcCCCCCcCC---HHHHHHHHH
Confidence 555544 666554433 34478888888632 3344444 2333333 222223355544 356777899
Q ss_pred hCCCCeEe
Q 006152 554 GFHIPVLV 561 (658)
Q Consensus 554 ~~~VPVyV 561 (658)
+|++.++|
T Consensus 206 ~~~~~li~ 213 (401)
T 2bwn_A 206 EFGALTYI 213 (401)
T ss_dssp HHTCEEEE
T ss_pred HcCCEEEE
Confidence 99987665
No 216
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=37.15 E-value=1.2e+02 Score=31.42 Aligned_cols=97 Identities=16% Similarity=0.156 Sum_probs=51.6
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHH-HH-HHHhCCCcEEEEcchH---HHHHhh-hccEEEEc
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLL-LR-RLVRKGLSCTYTHINA---ISYIIH-EVTRVFLG 529 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~L-a~-eL~~~GI~vT~I~DsA---v~~~M~-~Vd~VlvG 529 (658)
+.|++-+.+.++..++. ..+.| -+|++.+ |.+.|... .. .+...|+.++++...- +-..+. ++..|++
T Consensus 84 ~~i~~~sG~~ai~~~~~-l~~~g--d~Vl~~~--~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~~t~~v~~- 157 (403)
T 3cog_A 84 YCLAFASGLAATVTITH-LLKAG--DQIICMD--DVYGGTNRYFRQVASEFGLKISFVDCSKIKLLEAAITPETKLVWI- 157 (403)
T ss_dssp EEEEESCHHHHHHHHHT-TSCTT--CEEEEES--SCCHHHHHHHHHTGGGGTCEEEEECTTSHHHHHHHCCTTEEEEEE-
T ss_pred cEEEECCHHHHHHHHHH-HhCCC--CEEEEeC--CCcchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCcCCeEEEE-
Confidence 44444443556655555 43333 3566654 66766433 22 3457899999987432 222332 3344443
Q ss_pred ceeEecCCCeecccchHHHHHHHhhCC-CCeEe
Q 006152 530 ASSVLSNGTVCSRVGTACVAMVAYGFH-IPVLV 561 (658)
Q Consensus 530 AdaV~aNG~VvNKiGT~~lAl~Ak~~~-VPVyV 561 (658)
..---..|.+.. --.|+-+|++|+ +.++|
T Consensus 158 ~~p~nptG~~~~---l~~i~~la~~~g~~~liv 187 (403)
T 3cog_A 158 ETPTNPTQKVID---IEGCAHIVHKHGDIILVV 187 (403)
T ss_dssp ESSCTTTCCCCC---HHHHHHHHTSSSCCEEEE
T ss_pred ECCCCCCCeeeC---HHHHHHHHHHcCCCEEEE
Confidence 211123344443 346777889999 77665
No 217
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=37.00 E-value=79 Score=31.31 Aligned_cols=83 Identities=12% Similarity=0.077 Sum_probs=49.8
Q ss_pred HHHHHHHHHHhccCCCEEEeeCChHHHHHHHHHHHHc--CCeeEEEEeCCCCCchHHHHH-HHHHhCC--CcEEEEcchH
Q 006152 441 DRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHEL--GKQFRVVIVDSRPKHEGKLLL-RRLVRKG--LSCTYTHINA 515 (658)
Q Consensus 441 ~~~Ia~~a~~~I~dgdvILT~g~SsaV~~vL~~A~e~--gk~f~ViV~ESRP~~EG~~La-~eL~~~G--I~vT~I~DsA 515 (658)
.+.|+..+..++++|.+||=.|+|+-. ++..+.+. ....+|+-+|-.|.. .+.+ +.+.+.| .+|+++...+
T Consensus 57 ~~~i~~l~~~~~~~~~~vLDlGcGtG~--~~~~la~~~~~~~~~v~gvD~s~~m--l~~A~~~~~~~~~~~~v~~~~~D~ 132 (261)
T 4gek_A 57 ISMIGMLAERFVQPGTQVYDLGCSLGA--ATLSVRRNIHHDNCKIIAIDNSPAM--IERCRRHIDAYKAPTPVDVIEGDI 132 (261)
T ss_dssp HHHHHHHHHHHCCTTCEEEEETCTTTH--HHHHHHHTCCSSSCEEEEEESCHHH--HHHHHHHHHTSCCSSCEEEEESCT
T ss_pred HHHHHHHHHHhCCCCCEEEEEeCCCCH--HHHHHHHhcCCCCCEEEEEECCHHH--HHHHHHHHHhhccCceEEEeeccc
Confidence 445777788889999999999998742 11222222 346789988865432 2334 3455555 4688887554
Q ss_pred HHHHhhhccEEE
Q 006152 516 ISYIIHEVTRVF 527 (658)
Q Consensus 516 v~~~M~~Vd~Vl 527 (658)
...-....|.|+
T Consensus 133 ~~~~~~~~d~v~ 144 (261)
T 4gek_A 133 RDIAIENASMVV 144 (261)
T ss_dssp TTCCCCSEEEEE
T ss_pred ccccccccccce
Confidence 332233444443
No 218
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=36.89 E-value=1.3e+02 Score=30.73 Aligned_cols=102 Identities=16% Similarity=0.172 Sum_probs=55.1
Q ss_pred cCC-CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch---------------HH
Q 006152 453 RDG-DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN---------------AI 516 (658)
Q Consensus 453 ~dg-dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds---------------Av 516 (658)
... .+++|.|.+.++..+++.+...| -+|++.+ |.+.|... .+...|+.+..+... -+
T Consensus 99 ~~~~~v~~~~g~~~a~~~~~~~~~~~g--d~Vl~~~--p~y~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~ 172 (429)
T 1yiz_A 99 NPMTEVLVTVGAYEALYATIQGHVDEG--DEVIIIE--PFFDCYEP--MVKAAGGIPRFIPLKPNKTGGTISSADWVLDN 172 (429)
T ss_dssp CTTTSEEEESHHHHHHHHHHHHHCCTT--CEEEEEE--SCCTTHHH--HHHHTTCEEEEEECBCCCSSSSEEGGGCBCCH
T ss_pred CCcCCEEEecChHHHHHHHHHHhcCCC--CEEEEcC--CCchhHHH--HHHHcCCEEEEEeCCcccccccccccCcccCH
Confidence 344 68888888888877666654333 3566654 66666443 344578887776521 12
Q ss_pred HHHhh----hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 517 SYIIH----EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 517 ~~~M~----~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
..+-+ ++..|++- .--...|.++.+-=--.|+-+|++|++.+++
T Consensus 173 ~~l~~~l~~~~~~v~~~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 220 (429)
T 1yiz_A 173 NELEALFNEKTKMIIIN-TPHNPLGKVMDRAELEVVANLCKKWNVLCVS 220 (429)
T ss_dssp HHHHHHCCTTEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHhccCceEEEEC-CCCCCCCccCCHHHHHHHHHHHHHcCcEEEE
Confidence 22222 34444442 2111224443322223466688899987765
No 219
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=36.59 E-value=2.7e+02 Score=28.08 Aligned_cols=97 Identities=15% Similarity=0.068 Sum_probs=52.7
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHH-HHHH-HhCCCcEEEEcch---HHHHHhh-hccEEEEc
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLL-LRRL-VRKGLSCTYTHIN---AISYIIH-EVTRVFLG 529 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~L-a~eL-~~~GI~vT~I~Ds---Av~~~M~-~Vd~VlvG 529 (658)
+.|++-+.+.++..+++.+.+ +.-+|++.+ |.+.|... ...+ ...|+.+.++... .+-..+. ++..|++-
T Consensus 69 ~~i~~~sGt~a~~~~~~~~~~--~g~~vl~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~~ 144 (386)
T 1cs1_A 69 GAVLTNTGMSAIHLVTTVFLK--PGDLLVAPH--DCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVE 144 (386)
T ss_dssp EEEEESSHHHHHHHHHHHHCC--TTCEEEEET--TCCHHHHHHHHHHHTTTSCEEEEECTTCHHHHHHHHHTCCSEEEEE
T ss_pred cEEEeCCHHHHHHHHHHHHhC--CCCEEEEec--CCcHhHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhccCCcEEEEe
Confidence 445443335556555554433 334566654 66666332 2333 5679988888632 3333333 45566552
Q ss_pred ceeEe-cCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 530 ASSVL-SNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 530 AdaV~-aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
.+. ..|.+.. --.|+-+|++|++.+++
T Consensus 145 --~~~nptG~~~~---l~~i~~l~~~~~~~li~ 172 (386)
T 1cs1_A 145 --SPSNPLLRVVD---IAKICHLAREVGAVSVV 172 (386)
T ss_dssp --CSCTTTCCCCC---HHHHHHHHHHTTCEEEE
T ss_pred --CCCCCCCcccC---HHHHHHHHHHcCCEEEE
Confidence 222 2244442 35677789999988776
No 220
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=36.53 E-value=1.8e+02 Score=29.06 Aligned_cols=100 Identities=18% Similarity=0.264 Sum_probs=52.8
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch--------HHHHHhh----h
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN--------AISYIIH----E 522 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds--------Av~~~M~----~ 522 (658)
..+++|.|.+.++..++..+.+.| -+|++.+ |.+.+.. ..+...|+.+..+... .+..+-+ +
T Consensus 79 ~~v~~~~g~~~a~~~~~~~~~~~g--d~Vl~~~--~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~ 152 (381)
T 1v2d_A 79 ESVVVTSGATEALYVLLQSLVGPG--DEVVVLE--PFFDVYL--PDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPR 152 (381)
T ss_dssp GGEEEESSHHHHHHHHHHHHCCTT--CEEEEEE--SCCTTHH--HHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTT
T ss_pred hhEEEcCChHHHHHHHHHHhCCCC--CEEEEcC--CCchhHH--HHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcCcC
Confidence 357888888888877666664333 3566554 4455543 2345678887777532 1222222 2
Q ss_pred ccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 523 VTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 523 Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
+..|++- .--...|.++..-=-..++-+|+.|++.+++
T Consensus 153 ~~~v~~~-~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 190 (381)
T 1v2d_A 153 TRALLLN-TPMNPTGLVFGERELEAIARLARAHDLFLIS 190 (381)
T ss_dssp EEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEC-CCCCCCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 3334331 1111123332221123566788899988776
No 221
>2r5f_A Transcriptional regulator, putative; transcription regulator, sugar-binding domain, structural GE PFAM04198, PSI-2; 2.10A {Pseudomonas syringae PV} SCOP: c.124.1.8
Probab=36.44 E-value=73 Score=31.85 Aligned_cols=99 Identities=16% Similarity=0.188 Sum_probs=52.0
Q ss_pred HHHHHHhccCCCEEEeeC-ChHHHHHHHHHHHHcC--C-eeEEEEeC-CC---CCchHHHHHHHHHhC-CCcEEEEcch-
Q 006152 445 VKHAVTKIRDGDVLLTYG-SSSAVEMILQHAHELG--K-QFRVVIVD-SR---PKHEGKLLLRRLVRK-GLSCTYTHIN- 514 (658)
Q Consensus 445 a~~a~~~I~dgdvILT~g-~SsaV~~vL~~A~e~g--k-~f~ViV~E-SR---P~~EG~~La~eL~~~-GI~vT~I~Ds- 514 (658)
+++..+.|+++++ |-.+ +++++..+..+..+.. + +.+|+-++ +- |...-..|.+.|.+. |+++.++.--
T Consensus 48 A~~l~~~l~~~~v-iGla~~G~T~~~~~~~l~~~~~~~~~v~~v~L~ggl~~~~~~~~~~~~~~la~~~~~~~~~l~~P~ 126 (264)
T 2r5f_A 48 AHYLETSLSAQDH-IGISSWSSTIRAMVSHMHPQPGKQSAQEVVQLLGGVGNKGAFEATLLTQRLATLLNCPAFLLPSQS 126 (264)
T ss_dssp HHHHHHHCCTTCE-EEECTTCHHHHHHHHTCCC--CCCCCSEEEECEECCC--CHHHHHHHHHHHHHHHTSCEECCCCC-
T ss_pred HHHHHHhCCCCCE-EEECcchHHHHHHHHhhccccCCCCCcEEEECCCCCCCccccCHHHHHHHHHHHhCCeeEEeeCCc
Confidence 4455556777665 6667 9999888777664322 3 56666443 32 223334566777654 7776543221
Q ss_pred ---------------HHHHHh---hhccEEEEcceeEecCCCeecccch
Q 006152 515 ---------------AISYII---HEVTRVFLGASSVLSNGTVCSRVGT 545 (658)
Q Consensus 515 ---------------Av~~~M---~~Vd~VlvGAdaV~aNG~VvNKiGT 545 (658)
.+..++ .++|..|+|-=...+||.++| -|+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Di~l~GIG~~~~~~~i~~-~g~ 174 (264)
T 2r5f_A 127 IEQSVESKQRIVEMEEVKEVLHRFDSITLAIVGIGELEPSQLLRN-SGN 174 (264)
T ss_dssp ---------CCHHHHHHHHHHHHTTTCCEEEECCEECC-----------
T ss_pred ccCCHHHHHHHHcChHHHHHHHHHhcCCEEEEecCCCCCCccHhh-cCC
Confidence 122222 269999999887777899976 575
No 222
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=36.20 E-value=42 Score=31.96 Aligned_cols=55 Identities=18% Similarity=0.178 Sum_probs=35.8
Q ss_pred EEeeCCh-HHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc
Q 006152 458 LLTYGSS-SAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI 513 (658)
Q Consensus 458 ILT~g~S-saV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D 513 (658)
|.+|..+ ..|...|..|+++|..++|++....-...+ .....|.+.||++.+...
T Consensus 64 i~~y~~~~~~i~~aL~~aa~rGV~Vrii~D~~~~~~~~-~~~~~l~~~gi~v~~~~~ 119 (196)
T 4ggj_A 64 LCLFAFSSPQLGRAVQLLHQRGVRVRVITDCDYMALNG-SQIGLLRKAGIQVRHDQD 119 (196)
T ss_dssp EEESCBCCHHHHHHHHHHHHTTCEEEEEESSCCC---C-CHHHHHHHTTCEEEECCS
T ss_pred EEEEEeCCHHHHHHHHHHHHcCCcEEEEEecccccccH-HHHHHHHhcCCCcccccc
Confidence 4555443 345577888999999999998643322222 234678999999876543
No 223
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=36.14 E-value=98 Score=30.62 Aligned_cols=74 Identities=23% Similarity=0.264 Sum_probs=41.9
Q ss_pred EEeeCChHHHHHHHHHHHHcCCeeEEE-EeCCCCCchHHHHHHHHHhCCCcEEEEcc----------hHHHHHhh--hcc
Q 006152 458 LLTYGSSSAVEMILQHAHELGKQFRVV-IVDSRPKHEGKLLLRRLVRKGLSCTYTHI----------NAISYIIH--EVT 524 (658)
Q Consensus 458 ILT~g~SsaV~~vL~~A~e~gk~f~Vi-V~ESRP~~EG~~La~eL~~~GI~vT~I~D----------sAv~~~M~--~Vd 524 (658)
||..|.++....+|....+....++|. |+-.+|...|.+ ...+.|||+.++.. ..+-..++ ++|
T Consensus 27 ~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~---~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~~D 103 (229)
T 3auf_A 27 VLISGSGTNLQAILDGCREGRIPGRVAVVISDRADAYGLE---RARRAGVDALHMDPAAYPSRTAFDAALAERLQAYGVD 103 (229)
T ss_dssp EEESSCCHHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHH---HHHHTTCEEEECCGGGSSSHHHHHHHHHHHHHHTTCS
T ss_pred EEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHH---HHHHcCCCEEEECcccccchhhccHHHHHHHHhcCCC
Confidence 444488888767666555432234443 222346555544 34568999987642 33444444 678
Q ss_pred EEEEcce-eEe
Q 006152 525 RVFLGAS-SVL 534 (658)
Q Consensus 525 ~VlvGAd-aV~ 534 (658)
.+|+-+- .|+
T Consensus 104 liv~agy~~IL 114 (229)
T 3auf_A 104 LVCLAGYMRLV 114 (229)
T ss_dssp EEEESSCCSCC
T ss_pred EEEEcChhHhC
Confidence 8877443 444
No 224
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=36.09 E-value=76 Score=30.96 Aligned_cols=70 Identities=17% Similarity=0.282 Sum_probs=43.1
Q ss_pred EEEeeCChHHHHHHHHHHHHcCC-eeEEEEeC-CCCCchHHHHHHHHHhCCCcEEEEcc----------hHHHHHhh--h
Q 006152 457 VLLTYGSSSAVEMILQHAHELGK-QFRVVIVD-SRPKHEGKLLLRRLVRKGLSCTYTHI----------NAISYIIH--E 522 (658)
Q Consensus 457 vILT~g~SsaV~~vL~~A~e~gk-~f~ViV~E-SRP~~EG~~La~eL~~~GI~vT~I~D----------sAv~~~M~--~ 522 (658)
.||.-|+++.++.+|. +.+++. .++|.++= .+|...|.+ ...+.|||+.++.. ..+...++ +
T Consensus 4 aVl~SG~Gs~L~aLi~-~~~~~~~~~~I~~Vvs~~~~~~~~~---~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~ 79 (209)
T 1meo_A 4 AVLISGTGSNLQALID-STREPNSSAQIDIVISNKAAVAGLD---KAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFS 79 (209)
T ss_dssp EEEESSSCTTHHHHHH-HHHSTTCSCEEEEEEESSTTCHHHH---HHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHHTT
T ss_pred EEEEECCchHHHHHHH-HHhcCCCCcEEEEEEeCCCChHHHH---HHHHcCCCEEEECccccCchhhhhHHHHHHHHhcC
Confidence 4778899999877654 444453 45554333 345556654 34578999987642 33444454 6
Q ss_pred ccEEEEcc
Q 006152 523 VTRVFLGA 530 (658)
Q Consensus 523 Vd~VlvGA 530 (658)
+|.+|+-+
T Consensus 80 ~Dliv~a~ 87 (209)
T 1meo_A 80 IDIVCLAG 87 (209)
T ss_dssp CCEEEEES
T ss_pred CCEEEEcc
Confidence 78887654
No 225
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=35.99 E-value=60 Score=29.38 Aligned_cols=103 Identities=9% Similarity=0.101 Sum_probs=57.4
Q ss_pred CEEEeeCChHHHHHHH-HHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc----hHHHHHhhhccEEEEcc
Q 006152 456 DVLLTYGSSSAVEMIL-QHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI----NAISYIIHEVTRVFLGA 530 (658)
Q Consensus 456 dvILT~g~SsaV~~vL-~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D----sAv~~~M~~Vd~VlvGA 530 (658)
.+||..|-+.-+...| +.+.++| .+|+++.-++... ..+...++.+.. .| ..+..+++++|.||.-|
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~~-----~~~~~~~~~~~~-~D~~~~~~~~~~~~~~d~vi~~a 75 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAG--YEVTVLVRDSSRL-----PSEGPRPAHVVV-GDVLQAADVDKTVAGQDAVIVLL 75 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESCGGGS-----CSSSCCCSEEEE-SCTTSHHHHHHHHTTCSEEEECC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeChhhc-----ccccCCceEEEE-ecCCCHHHHHHHHcCCCEEEECc
Confidence 5678888765554433 4455556 5677665443210 011123443322 22 35666777888887654
Q ss_pred eeEe-cCCCeecccchHHHHHHHhhCCCCeEeecccc
Q 006152 531 SSVL-SNGTVCSRVGTACVAMVAYGFHIPVLVCCEAY 566 (658)
Q Consensus 531 daV~-aNG~VvNKiGT~~lAl~Ak~~~VPVyV~aety 566 (658)
-... .+-.-+|-.|+..+.-+|+.+++.-+|...+.
T Consensus 76 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~ 112 (206)
T 1hdo_A 76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA 112 (206)
T ss_dssp CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred cCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence 3211 01122466789999888988888766655544
No 226
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=35.94 E-value=1.6e+02 Score=30.21 Aligned_cols=97 Identities=15% Similarity=0.099 Sum_probs=53.4
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHH-HHHH-HhCCCcEEEEcchHHHHH---hh-hccEEEEc
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLL-LRRL-VRKGLSCTYTHINAISYI---IH-EVTRVFLG 529 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~L-a~eL-~~~GI~vT~I~DsAv~~~---M~-~Vd~VlvG 529 (658)
+.|++-+.+.++..+|..+.+.| -+|++.+ |.+.+... ...+ ...|+.+.++...-+..+ +. ++..|++.
T Consensus 82 ~~i~~~sG~~a~~~~l~~~~~~g--d~vl~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~~ 157 (398)
T 1gc0_A 82 AGLALASGMGAITSTLWTLLRPG--DEVLLGN--TLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTPATRVIYFE 157 (398)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTT--CEEEEES--SCCSHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEE
T ss_pred cEEEECCHHHHHHHHHHHHhcCC--CEEEEeC--CCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCeEEEEE
Confidence 45555555566655555554333 3566654 55555433 3333 567999998864323333 32 34445442
Q ss_pred ceeEe-cCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 530 ASSVL-SNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 530 AdaV~-aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
.+. ..|.+.. --.++-+|++|++.++|
T Consensus 158 --~~~nptG~~~~---l~~i~~l~~~~~~~li~ 185 (398)
T 1gc0_A 158 --SPANPNMHMAD---IAGVAKIARKHGATVVV 185 (398)
T ss_dssp --SSCTTTCCCCC---HHHHHHHHGGGTCEEEE
T ss_pred --CCCCCCccccc---HHHHHHHHHHcCCEEEE
Confidence 222 2344442 35677789999998776
No 227
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=35.61 E-value=1.4e+02 Score=24.86 Aligned_cols=78 Identities=18% Similarity=0.158 Sum_probs=44.5
Q ss_pred cCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch--HHHHHhh-hccEEEEcceeEecCCCeecccchHHHHHHHh
Q 006152 477 LGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN--AISYIIH-EVTRVFLGASSVLSNGTVCSRVGTACVAMVAY 553 (658)
Q Consensus 477 ~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds--Av~~~M~-~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak 553 (658)
.....+|+|+|..+.. ...+...|...|+.|....+. ++..+-. ..|.|| +.+. -|--.+..+-+
T Consensus 15 ~~~~~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlvi------~~~~-----~g~~~~~~l~~ 82 (137)
T 2pln_A 15 PRGSMRVLLIEKNSVL-GGEIEKGLNVKGFMADVTESLEDGEYLMDIRNYDLVM------VSDK-----NALSFVSRIKE 82 (137)
T ss_dssp CTTCSEEEEECSCHHH-HHHHHHHHHHTTCEEEEESCHHHHHHHHHHSCCSEEE------ECST-----THHHHHHHHHH
T ss_pred CCCCCeEEEEeCCHHH-HHHHHHHHHHcCcEEEEeCCHHHHHHHHHcCCCCEEE------EcCc-----cHHHHHHHHHh
Confidence 3456788888876543 233456677788888765543 2222222 467777 2221 23333333433
Q ss_pred hC-CCCeEeecccc
Q 006152 554 GF-HIPVLVCCEAY 566 (658)
Q Consensus 554 ~~-~VPVyV~aety 566 (658)
.. ++|+++++...
T Consensus 83 ~~~~~~ii~ls~~~ 96 (137)
T 2pln_A 83 KHSSIVVLVSSDNP 96 (137)
T ss_dssp HSTTSEEEEEESSC
T ss_pred cCCCccEEEEeCCC
Confidence 35 89999987643
No 228
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=35.56 E-value=2.5e+02 Score=27.28 Aligned_cols=61 Identities=16% Similarity=0.095 Sum_probs=35.8
Q ss_pred HHHhCCCc---EEEEcchHHHHHhh-----hccEEEEcceeEecCCCeec-ccchHHHHHHHhhCCCCeEeecc
Q 006152 500 RLVRKGLS---CTYTHINAISYIIH-----EVTRVFLGASSVLSNGTVCS-RVGTACVAMVAYGFHIPVLVCCE 564 (658)
Q Consensus 500 eL~~~GI~---vT~I~DsAv~~~M~-----~Vd~VlvGAdaV~aNG~VvN-KiGT~~lAl~Ak~~~VPVyV~ae 564 (658)
.+.+.|++ +.+...+....++. ++|.|++|+..- |.+-. -.|+-.-. +.++-.+||+|+=+
T Consensus 207 ~~~~~g~~~~~~~v~~g~~~~~I~~~a~~~~~dLiVmG~~g~---~~~~~~~~Gsv~~~-vl~~~~~pVLvv~~ 276 (290)
T 3mt0_A 207 FQAEYGFSDEQLHIEEGPADVLIPRTAQKLDAVVTVIGTVAR---TGLSGALIGNTAEV-VLDTLESDVLVLKP 276 (290)
T ss_dssp HHHHHTCCTTTEEEEESCHHHHHHHHHHHHTCSEEEEECCSS---CCGGGCCSCHHHHH-HHTTCSSEEEEECC
T ss_pred HHHHcCCCcceEEEeccCHHHHHHHHHHhcCCCEEEECCCCC---cCCcceecchHHHH-HHhcCCCCEEEECC
Confidence 34456774 34444444444433 499999999752 22222 25654444 45677899999854
No 229
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=35.41 E-value=31 Score=33.59 Aligned_cols=51 Identities=8% Similarity=-0.010 Sum_probs=30.6
Q ss_pred HHHHhhh-ccEEEEcceeEecC---CCeecccchHHHHHHHhhCCCCeEeecccc
Q 006152 516 ISYIIHE-VTRVFLGASSVLSN---GTVCSRVGTACVAMVAYGFHIPVLVCCEAY 566 (658)
Q Consensus 516 v~~~M~~-Vd~VlvGAdaV~aN---G~VvNKiGT~~lAl~Ak~~~VPVyV~aety 566 (658)
+..++.. +|.||--|-....+ ---+|-.||..+.-+|+..++.-+|.+.+.
T Consensus 56 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~ 110 (286)
T 3gpi_A 56 LASIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSST 110 (286)
T ss_dssp CTTGGGGCCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEG
T ss_pred HHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEccc
Confidence 3344554 77777544211111 112467899999999999998766665543
No 230
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=35.27 E-value=2.8e+02 Score=28.90 Aligned_cols=97 Identities=12% Similarity=-0.095 Sum_probs=54.5
Q ss_pred EEEeeCChHHHHHHHHHHHH--------cC---CeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch---------HH
Q 006152 457 VLLTYGSSSAVEMILQHAHE--------LG---KQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN---------AI 516 (658)
Q Consensus 457 vILT~g~SsaV~~vL~~A~e--------~g---k~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds---------Av 516 (658)
.++|-|.+.++...|..+.. .| .+.+|++.+ .+ ....+.+...|+.+.++... ++
T Consensus 106 ~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~---~h--~~~~~~~~~~G~~v~~v~~~~~~~~~d~~~l 180 (452)
T 2dgk_A 106 GTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP---VQ--ICWHKFARYWDVELREIPMRPGQLFMDPKRM 180 (452)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS---CC--HHHHHHHHHTTCEEEECCCBTTBCSCCHHHH
T ss_pred eEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC---Cc--HHHHHHHHHcCceEEEEecCCCCCeECHHHH
Confidence 67887777776555554432 35 234677755 22 22334455679988888632 12
Q ss_pred HHHhhhccEEEEcceeEecCCCeecccchHHHHHHHhh------CCCCeEe
Q 006152 517 SYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYG------FHIPVLV 561 (658)
Q Consensus 517 ~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~------~~VPVyV 561 (658)
-..+.+-+++|+....-...|.+.. --.|+-+|++ +++.|+|
T Consensus 181 ~~~i~~~t~~v~~~~~~n~tG~~~~---l~~I~~ia~~~~~~~~~~~~l~v 228 (452)
T 2dgk_A 181 IEACDENTIGVVPTFGVTYTGNYEF---PQPLHDALDKFQADTGIDIDMHI 228 (452)
T ss_dssp HHHCCTTEEEEECBBSCTTTCBBCC---HHHHHHHHHHHHHHHCCCCCEEE
T ss_pred HHHHhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHHHhhccCCCCcEEE
Confidence 2223233455555554455565532 2356667777 4888887
No 231
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=35.08 E-value=1.3e+02 Score=25.11 Aligned_cols=82 Identities=15% Similarity=0.109 Sum_probs=47.3
Q ss_pred CCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEE-Ecch--HHHHHhh-hccEEEEcceeEecCCCeecccchHHHHHHHh
Q 006152 478 GKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTY-THIN--AISYIIH-EVTRVFLGASSVLSNGTVCSRVGTACVAMVAY 553 (658)
Q Consensus 478 gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~-I~Ds--Av~~~M~-~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak 553 (658)
....+|+|+|..+.. ...+...|.+.|+.+.. ..+. ++.++-. ..|.||+..+- .+| .-|.-.+..+-+
T Consensus 7 ~~~~~iLivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~~a~~~~~~~~~dlii~d~~~--~~~----~~g~~~~~~l~~ 79 (140)
T 3cg0_A 7 DDLPGVLIVEDGRLA-AATLRIQLESLGYDVLGVFDNGEEAVRCAPDLRPDIALVDIML--CGA----LDGVETAARLAA 79 (140)
T ss_dssp -CCCEEEEECCBHHH-HHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHCCSEEEEESSC--CSS----SCHHHHHHHHHH
T ss_pred CCCceEEEEECCHHH-HHHHHHHHHHCCCeeEEEECCHHHHHHHHHhCCCCEEEEecCC--CCC----CCHHHHHHHHHh
Confidence 456788888876543 23345667778988875 4432 2333322 58999887542 111 123333334433
Q ss_pred hCCCCeEeecccc
Q 006152 554 GFHIPVLVCCEAY 566 (658)
Q Consensus 554 ~~~VPVyV~aety 566 (658)
..++|+++++...
T Consensus 80 ~~~~~ii~ls~~~ 92 (140)
T 3cg0_A 80 GCNLPIIFITSSQ 92 (140)
T ss_dssp HSCCCEEEEECCC
T ss_pred CCCCCEEEEecCC
Confidence 4789999987754
No 232
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=35.06 E-value=1.2e+02 Score=32.39 Aligned_cols=110 Identities=15% Similarity=0.027 Sum_probs=60.9
Q ss_pred CCCEEEeeCChHHHHHHH-HHHHHcCC-eeEEEEeCCCCCchHHHHHHHH------------------HhCCCcEEEEcc
Q 006152 454 DGDVLLTYGSSSAVEMIL-QHAHELGK-QFRVVIVDSRPKHEGKLLLRRL------------------VRKGLSCTYTHI 513 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL-~~A~e~gk-~f~ViV~ESRP~~EG~~La~eL------------------~~~GI~vT~I~D 513 (658)
.+.+||..|-+.-|...| +.+.+.+. ..+|+++.-++..+ ....+| ...++.+.....
T Consensus 72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 149 (478)
T 4dqv_A 72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDE--DARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK 149 (478)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHH--HHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcH--HHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence 567888888765544333 34444432 36888876544322 111111 123443333222
Q ss_pred ---------hHHHHHhhhccEEEEcceeEecC----CCeecccchHHHHHHHhhCCCCeEeeccc
Q 006152 514 ---------NAISYIIHEVTRVFLGASSVLSN----GTVCSRVGTACVAMVAYGFHIPVLVCCEA 565 (658)
Q Consensus 514 ---------sAv~~~M~~Vd~VlvGAdaV~aN----G~VvNKiGT~~lAl~Ak~~~VPVyV~aet 565 (658)
..+..++.++|.||--|-.+-.+ ---.|-.||..++-+|+.+++.-+|...+
T Consensus 150 ~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS 214 (478)
T 4dqv_A 150 SEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVST 214 (478)
T ss_dssp TSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEE
T ss_pred CCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEee
Confidence 24667778888887655322110 01147789999999999999754444444
No 233
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=35.05 E-value=1.4e+02 Score=27.70 Aligned_cols=106 Identities=11% Similarity=0.050 Sum_probs=62.1
Q ss_pred CCCEEEeeCChHHHHHHH-HHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEc--c-hHHHHHhhhccEEEEc
Q 006152 454 DGDVLLTYGSSSAVEMIL-QHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTH--I-NAISYIIHEVTRVFLG 529 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL-~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~--D-sAv~~~M~~Vd~VlvG 529 (658)
.+.+||..|-+.-+..-| +.+.++|...+|+++.-++. . ..+| ..++.+.... | ..+..++.++|.||--
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~----~-~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 76 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQ----G-KEKI-GGEADVFIGDITDADSINPAFQGIDALVIL 76 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHH----H-HHHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCC----c-hhhc-CCCeeEEEecCCCHHHHHHHHcCCCEEEEe
Confidence 356788888765554444 44555543567887764431 1 1222 3445443221 2 4667778889998876
Q ss_pred ceeEecC-----------CC----------eecccchHHHHHHHhhCCCCeEeeccc
Q 006152 530 ASSVLSN-----------GT----------VCSRVGTACVAMVAYGFHIPVLVCCEA 565 (658)
Q Consensus 530 AdaV~aN-----------G~----------VvNKiGT~~lAl~Ak~~~VPVyV~aet 565 (658)
|-..... -. -+|-.|+..+.-+|+.+++.-+|...+
T Consensus 77 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 133 (253)
T 1xq6_A 77 TSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGS 133 (253)
T ss_dssp CCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred ccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 5432110 11 256789999999999888876665444
No 234
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=34.97 E-value=26 Score=35.55 Aligned_cols=82 Identities=9% Similarity=0.018 Sum_probs=55.2
Q ss_pred eEEEEeCCCCCchHHHH-HHHHHhCCCcEEEEcchHHH---HHhhhccEEEEcceeEecCCCeecccchHHHHHHHhh--
Q 006152 481 FRVVIVDSRPKHEGKLL-LRRLVRKGLSCTYTHINAIS---YIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYG-- 554 (658)
Q Consensus 481 f~ViV~ESRP~~EG~~L-a~eL~~~GI~vT~I~DsAv~---~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~-- 554 (658)
-+|.++++..+.+|... ...|.+.|++|+++....+. .-+.+.|.||++ | +.. +.+.-.++..+.++
T Consensus 5 ~~vLiV~g~~~~~~a~~l~~aL~~~g~~V~~i~~~~~~~~~~~L~~yDvIIl~-d-~~~-----~~l~~~~~~~L~~yV~ 77 (259)
T 3rht_A 5 TRVLYCGDTSLETAAGYLAGLMTSWQWEFDYIPSHVGLDVGELLAKQDLVILS-D-YPA-----ERMTAQAIDQLVTMVK 77 (259)
T ss_dssp -CEEEEESSCTTTTHHHHHHHHHHTTCCCEEECTTSCBCSSHHHHTCSEEEEE-S-CCG-----GGBCHHHHHHHHHHHH
T ss_pred ceEEEECCCCchhHHHHHHHHHHhCCceEEEecccccccChhHHhcCCEEEEc-C-Ccc-----ccCCHHHHHHHHHHHH
Confidence 36777787766667665 47899999999999987663 567899999986 2 111 23444555555554
Q ss_pred CCCCeEeeccccccc
Q 006152 555 FHIPVLVCCEAYKFH 569 (658)
Q Consensus 555 ~~VPVyV~aetyKf~ 569 (658)
.|-=++++.....|.
T Consensus 78 ~GGgLi~~gG~~s~~ 92 (259)
T 3rht_A 78 AGCGLVMLGGWESYH 92 (259)
T ss_dssp TTCEEEEECSTTSSS
T ss_pred hCCeEEEecCccccc
Confidence 477788886654443
No 235
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=34.72 E-value=90 Score=29.97 Aligned_cols=99 Identities=12% Similarity=0.124 Sum_probs=51.5
Q ss_pred EEeeCChHHHHHHHHH-HHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEc--c-hHHHHHhhhccEEEEcceeE
Q 006152 458 LLTYGSSSAVEMILQH-AHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTH--I-NAISYIIHEVTRVFLGASSV 533 (658)
Q Consensus 458 ILT~g~SsaV~~vL~~-A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~--D-sAv~~~M~~Vd~VlvGAdaV 533 (658)
||..|-+.-+..-|.. +.++...++|+++.-++.. ...|...++.+.... | ..+..++..+|.||--|-..
T Consensus 2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~-----~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~ 76 (286)
T 2zcu_A 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAK-----AQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSE 76 (286)
T ss_dssp EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTT-----CHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC---
T ss_pred EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHh-----hhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCC
Confidence 5666665555444433 3333124567766544432 123444566543321 1 45666777888887644321
Q ss_pred ecCCCeecccchHHHHHHHhhCCCCeEeeccc
Q 006152 534 LSNGTVCSRVGTACVAMVAYGFHIPVLVCCEA 565 (658)
Q Consensus 534 ~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~aet 565 (658)
.+ .|-.||..+.-+|+.++++-+|...+
T Consensus 77 -~~---~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 77 -VG---QRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp ---------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred -ch---HHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 11 35568888888888888776665444
No 236
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=34.64 E-value=1.6e+02 Score=24.28 Aligned_cols=57 Identities=16% Similarity=0.076 Sum_probs=37.1
Q ss_pred cCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCC-CCchHHHHHHHHHhC----CCcEEEEcch
Q 006152 453 RDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSR-PKHEGKLLLRRLVRK----GLSCTYTHIN 514 (658)
Q Consensus 453 ~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESR-P~~EG~~La~eL~~~----GI~vT~I~Ds 514 (658)
..|..|.+....... +..+.+ ..+.++++|.. |...|..+++.|.+. ++++.+++..
T Consensus 25 ~~~~~v~~~~~~~~a---~~~l~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~ 86 (133)
T 3nhm_A 25 SGEFDCTTAADGASG---LQQALA--HPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGY 86 (133)
T ss_dssp TTTSEEEEESSHHHH---HHHHHH--SCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESC
T ss_pred hCCcEEEEECCHHHH---HHHHhc--CCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCC
Confidence 355566666655433 222222 35778888754 778899999999875 5777777653
No 237
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=34.62 E-value=1.4e+02 Score=31.13 Aligned_cols=96 Identities=17% Similarity=0.231 Sum_probs=51.9
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHH-HH-HH-HHhCCCcEEEEcchHHHHH---hh-hccEEEE
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKL-LL-RR-LVRKGLSCTYTHINAISYI---IH-EVTRVFL 528 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~-La-~e-L~~~GI~vT~I~DsAv~~~---M~-~Vd~Vlv 528 (658)
+.|++-+.+.++.. +....+.| -+|++.+ |.+.|.. +. .. +...|+.++++...-+..+ +. ++..|++
T Consensus 84 ~~~~~~sG~~Ai~~-~~~l~~~g--d~Vi~~~--~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~ 158 (400)
T 3nmy_A 84 RAFAFASGMAATST-VMELLDAG--SHVVAMD--DLYGGTFRLFERVRRRTAGLDFSFVDLTDPAAFKAAIRADTKMVWI 158 (400)
T ss_dssp EEEEESSHHHHHHH-HHTTSCTT--CEEEEES--SCCHHHHHHHHHTHHHHHCCEEEEECTTSHHHHHHHCCTTEEEEEE
T ss_pred CEEEecCHHHHHHH-HHHHcCCC--CEEEEeC--CCchHHHHHHHHhhHhhcCeEEEEECCCCHHHHHHHhccCCCEEEE
Confidence 34554444455644 33333233 3566543 5565433 33 33 6677999999874433333 32 3444444
Q ss_pred cceeEe-cCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 529 GASSVL-SNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 529 GAdaV~-aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
+.+. ..|.+.. --.|+-+|++|+++++|
T Consensus 159 --e~~~np~G~~~~---l~~i~~la~~~g~~liv 187 (400)
T 3nmy_A 159 --ETPTNPMLKLVD---IAAIAVIARKHGLLTVV 187 (400)
T ss_dssp --ESSCTTTCCCCC---HHHHHHHHHHTTCEEEE
T ss_pred --ECCCCCCCeeec---HHHHHHHHHHcCCEEEE
Confidence 2333 2344443 45677889999998876
No 238
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=34.58 E-value=2.7e+02 Score=27.91 Aligned_cols=96 Identities=9% Similarity=0.021 Sum_probs=52.5
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc---hHHHHHhh-------hccE
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI---NAISYIIH-------EVTR 525 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D---sAv~~~M~-------~Vd~ 525 (658)
+.|++-+.+.++..+++.+...| -.|++.+ |.+.+ +...+...|+.+..+.. ..+-..+. ++..
T Consensus 107 ~~i~~~sGs~a~~~~~~~~~~~g--d~v~~~~--~~~~~--~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 180 (401)
T 1fc4_A 107 DAILYSSCFDANGGLFETLLGAE--DAIISDA--LNHAS--IIDGVRLCKAKRYRYANNDMQELEARLKEAREAGARHVL 180 (401)
T ss_dssp EEEEESCHHHHHHTTHHHHCCTT--CEEEEET--TCCHH--HHHHHHTSCSEEEEECTTCHHHHHHHHHHHHHTTCSSEE
T ss_pred cEEEeCChHHHHHHHHHHHcCCC--CEEEEcc--hhHHH--HHHHHHHcCCceEEECCCCHHHHHHHHHHhhccCCCceE
Confidence 55555444556655555443333 3555543 45533 22346678998888752 33444444 3445
Q ss_pred EEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 526 VFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 526 VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
|++ ..--...|.+.. --.|+-+|++|++.+++
T Consensus 181 v~~-~~~~nptG~~~~---~~~i~~l~~~~~~~li~ 212 (401)
T 1fc4_A 181 IAT-DGVFSMDGVIAN---LKGVCDLADKYDALVMV 212 (401)
T ss_dssp EEE-ESEETTTTEECC---HHHHHHHHHHTTEEEEE
T ss_pred EEE-eCCcCCCCCCCC---HHHHHHHHHHcCCEEEE
Confidence 554 333234465555 46677789999986665
No 239
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=34.56 E-value=2.5e+02 Score=28.69 Aligned_cols=113 Identities=9% Similarity=-0.077 Sum_probs=60.8
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEE-EeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEcc----
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVV-IVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGA---- 530 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~Vi-V~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~VlvGA---- 530 (658)
..|..+|.+..-...+....+....++|+ |++..+.. ..+++. +.||.+....|-.-..--.++|.|++..
T Consensus 24 ~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~-~~~~a~---~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 99 (357)
T 3ec7_A 24 LKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGR-AQAALD---KYAIEAKDYNDYHDLINDKDVEVVIITASNEA 99 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTH-HHHHHH---HHTCCCEEESSHHHHHHCTTCCEEEECSCGGG
T ss_pred eeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHH-HHHHHH---HhCCCCeeeCCHHHHhcCCCCCEEEEcCCcHH
Confidence 36888888875444444443244567766 56655432 222222 2366555555432221123688888743
Q ss_pred -------------eeEecCCCeecccchHHHHHHHhhCCCCeEeecccccccccc
Q 006152 531 -------------SSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERV 572 (658)
Q Consensus 531 -------------daV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~aetyKf~~~~ 572 (658)
+.++.-=-..+--....+.-+|+..++.++.++-.+.|.+.+
T Consensus 100 h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~~v~~~~R~~p~~ 154 (357)
T 3ec7_A 100 HADVAVAALNANKYVFCEKPLAVTAADCQRVIEAEQKNGKRMVQIGFMRRYDKGY 154 (357)
T ss_dssp HHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHTSCCEEEECGGGGSHHH
T ss_pred HHHHHHHHHHCCCCEEeecCccCCHHHHHHHHHHHHHhCCeEEEEeecccCCHHH
Confidence 333333233344445556667788888885555566676554
No 240
>3npg_A Uncharacterized DUF364 family protein; protein with unknown function from DUF364 family, structural genomics; 2.70A {Pyrococcus horikoshii}
Probab=34.51 E-value=87 Score=31.45 Aligned_cols=95 Identities=16% Similarity=0.126 Sum_probs=63.2
Q ss_pred cCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEccee
Q 006152 453 RDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASS 532 (658)
Q Consensus 453 ~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~VlvGAda 532 (658)
..+..|..+||-..+...|. .+ ++|+|+|-.|.+-|. + ...|..-.++++++|.||+=+.+
T Consensus 114 ~~~~kV~vIG~~p~l~~~l~-----~~-~~v~V~d~~p~~~~~---------~----~~~~~~e~~~l~~~D~v~iTGsT 174 (249)
T 3npg_A 114 DEIKRIAIIGNMPPVVRTLK-----EK-YEVYVFERNMKLWDR---------D----TYSDTLEYHILPEVDGIIASASC 174 (249)
T ss_dssp SCCSEEEEESCCHHHHHHHT-----TT-SEEEEECCSGGGCCS---------S----EECGGGHHHHGGGCSEEEEETTH
T ss_pred cCCCEEEEECCCHHHHHHHh-----cc-CCEEEEECCCcccCC---------C----CCChhHHHhhhccCCEEEEEeee
Confidence 45689999999886533332 23 899999999987442 1 23565555799999999987665
Q ss_pred EecCCCeecccchHHHHHHHhhCCCCeEeecccccccccccC
Q 006152 533 VLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQL 574 (658)
Q Consensus 533 V~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~aetyKf~~~~~~ 574 (658)
+. ||++ --.+.+ |+ ....++++.||.-+.+.+-.
T Consensus 175 lv-N~Ti-----~~lL~~-~~-~~~~vvl~GPS~~~~P~~~~ 208 (249)
T 3npg_A 175 IV-NGTL-----DMILDR-AK-KAKLIVITGPTGQLLPEFLK 208 (249)
T ss_dssp HH-HTCH-----HHHHHH-CS-SCSEEEEESGGGCSCGGGGT
T ss_pred ec-cCCH-----HHHHHh-Cc-ccCeEEEEecCchhhHHHHh
Confidence 54 4432 112222 22 34578999999988877643
No 241
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=34.46 E-value=1.1e+02 Score=31.31 Aligned_cols=106 Identities=14% Similarity=0.191 Sum_probs=54.3
Q ss_pred ccCCCEEEeeCChHHHH--HHHHHHHH--cCC-------eeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc-------
Q 006152 452 IRDGDVLLTYGSSSAVE--MILQHAHE--LGK-------QFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI------- 513 (658)
Q Consensus 452 I~dgdvILT~g~SsaV~--~vL~~A~e--~gk-------~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D------- 513 (658)
+....+++|-|.+.++. .++..... .|. .-+|++.+ |.+.+.... +...|..+..+..
T Consensus 85 ~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~--p~y~~~~~~--~~~~g~~~~~v~~~~~g~d~ 160 (423)
T 3ez1_A 85 VKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTV--PGYDRHFLL--LQTLGFELLTVDMQSDGPDV 160 (423)
T ss_dssp SCGGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEE--SCCHHHHHH--HHHHTCEEEEEEEETTEECH
T ss_pred CChhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcC--CCcHHHHHH--HHHcCCEEEeccCCCCCCCH
Confidence 33457888888888875 44444333 221 24666543 667665433 4445777766532
Q ss_pred hHHHHHhh---hccEEEEcceeEecCCCeecccchHHHHHHH-hhCCCCeEe
Q 006152 514 NAISYIIH---EVTRVFLGASSVLSNGTVCSRVGTACVAMVA-YGFHIPVLV 561 (658)
Q Consensus 514 sAv~~~M~---~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~A-k~~~VPVyV 561 (658)
..+-..+. ++..|++=...=...|.++..----.|+-+| ++|++.+++
T Consensus 161 ~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~ 212 (423)
T 3ez1_A 161 DAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFA 212 (423)
T ss_dssp HHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEE
T ss_pred HHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEE
Confidence 33444442 3333332211112224443333223555566 888887664
No 242
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=34.43 E-value=62 Score=29.98 Aligned_cols=99 Identities=10% Similarity=-0.015 Sum_probs=55.8
Q ss_pred EEEeeCChHHHHHHH-HHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEE--cchHHHHHhhhccEEEEcceeE
Q 006152 457 VLLTYGSSSAVEMIL-QHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYT--HINAISYIIHEVTRVFLGASSV 533 (658)
Q Consensus 457 vILT~g~SsaV~~vL-~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I--~DsAv~~~M~~Vd~VlvGAdaV 533 (658)
.||..|-+.-+...| +.+.++| .+|+++.-++. . +.+|...++.+... .|... ..+..+|.||--|-..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~----~-~~~~~~~~~~~~~~D~~d~~~-~~~~~~d~vi~~ag~~ 73 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRG--HEVLAVVRDPQ----K-AADRLGATVATLVKEPLVLTE-ADLDSVDAVVDALSVP 73 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHH----H-HHHHTCTTSEEEECCGGGCCH-HHHTTCSEEEECCCCC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCC--CEEEEEEeccc----c-cccccCCCceEEecccccccH-hhcccCCEEEECCccC
Confidence 477777765444333 4445555 46666643321 1 23444456554332 22222 5667788777655322
Q ss_pred -ecCCCeecccchHHHHHHHhhCCCCeEeec
Q 006152 534 -LSNGTVCSRVGTACVAMVAYGFHIPVLVCC 563 (658)
Q Consensus 534 -~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~a 563 (658)
...-.-.|-.||..+.-+|+..+..|+++.
T Consensus 74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S 104 (224)
T 3h2s_A 74 WGSGRGYLHLDFATHLVSLLRNSDTLAVFIL 104 (224)
T ss_dssp TTSSCTHHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred CCcchhhHHHHHHHHHHHHHHHcCCcEEEEe
Confidence 111223488899999999999996666664
No 243
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=34.42 E-value=4.6e+02 Score=28.07 Aligned_cols=94 Identities=15% Similarity=0.102 Sum_probs=55.9
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCC-CcEEEEc--ch-HHHHHhh--hccEEE
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKG-LSCTYTH--IN-AISYIIH--EVTRVF 527 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~G-I~vT~I~--Ds-Av~~~M~--~Vd~Vl 527 (658)
.|..|+.++....+..+.+-+.+.|-....+++.+.....-.++.+.|.+.| ..+.++. |. .+-.+++ ++|++|
T Consensus 311 ~gkrv~i~~~~~~~~~l~~~L~elG~~vv~v~~~~~~~~~~~~~~~ll~~~~~~~~~v~~~~d~~~l~~~i~~~~pDl~i 390 (458)
T 1mio_B 311 QGKKVALLGDPDEIIALSKFIIELGAIPKYVVTGTPGMKFQKEIDAMLAEAGIEGSKVKVEGDFFDVHQWIKNEGVDLLI 390 (458)
T ss_dssp TTCEEEEEECHHHHHHHHHHHHTTTCEEEEEEESSCCHHHHHHHHHHHHTTTCCSCEEEESCBHHHHHHHHHHSCCSEEE
T ss_pred CCCEEEEEcCchHHHHHHHHHHHCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCCCEEEECCCHHHHHHHHHhcCCCEEE
Confidence 6788888888776656555556677766666666643333334445555655 5544444 32 2344454 567766
Q ss_pred EcceeEecCCCeecccchHHHHHHHhhCCCCeEeec
Q 006152 528 LGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCC 563 (658)
Q Consensus 528 vGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~a 563 (658)
-|-. -.-+|+..++|++.+.
T Consensus 391 g~~~----------------~~~~a~k~gip~~~~~ 410 (458)
T 1mio_B 391 SNTY----------------GKFIAREENIPFVRFG 410 (458)
T ss_dssp ESGG----------------GHHHHHHHTCCEEECS
T ss_pred eCcc----------------hHHHHHHcCCCEEEee
Confidence 4421 2345788899999763
No 244
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=34.39 E-value=3.8e+02 Score=27.05 Aligned_cols=99 Identities=11% Similarity=0.045 Sum_probs=51.7
Q ss_pred EEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCC--cEEEEc-----------------chHHH
Q 006152 457 VLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGL--SCTYTH-----------------INAIS 517 (658)
Q Consensus 457 vILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI--~vT~I~-----------------DsAv~ 517 (658)
+++|-|-+.+++.++. +.. ..-+|++.+ +.+-|..+...+...|+ .+.++. ...+-
T Consensus 54 v~~~~sgt~a~~~~~~-~~~--~gd~vi~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~ 128 (379)
T 3ke3_A 54 VIIPGSGTYGMEAVAR-QLT--IDEDCLIIR--NGWFSYRWTQILEKGKFAKSSTVLTAERTEDTEAPKPFAPVDIETAV 128 (379)
T ss_dssp EEEESCHHHHHHHHHH-HHC--TTCEEEEEE--CSHHHHHHHHHHHHHCCSSEEEEEECEESSCCSSCCCEECCCHHHHH
T ss_pred EEEcCChhHHHHHHHH-hCC--CCCeEEEEe--CCchhHHHHHHHHHhCCCCceEEEeccccccccccCCCCCCCHHHHH
Confidence 4444455556666553 443 334677765 44556655555555665 444442 13344
Q ss_pred HHhh--hccEEEEcceeEecCCCeecccc-hHHHHHHHhhCCCCeEee
Q 006152 518 YIIH--EVTRVFLGASSVLSNGTVCSRVG-TACVAMVAYGFHIPVLVC 562 (658)
Q Consensus 518 ~~M~--~Vd~VlvGAdaV~aNG~VvNKiG-T~~lAl~Ak~~~VPVyV~ 562 (658)
..+. +...|++- ..=...| ++...+ --.|+-+|++|++.++|=
T Consensus 129 ~~i~~~~~~~v~~~-~~~~~~G-~~~~~~~l~~i~~~~~~~~~~li~D 174 (379)
T 3ke3_A 129 AKIKEDKSAIVYAP-HVETSSG-IILSEEYIKALSEAVHSVGGLLVID 174 (379)
T ss_dssp HHHHHHTCSEEEEE-SEETTTT-EECCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHhhcCCcEEEEE-eecCCCc-eeCCHHHHHHHHHHHHHcCCEEEEE
Confidence 4453 45555441 1111224 444432 335777899999988764
No 245
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=34.37 E-value=2e+02 Score=29.34 Aligned_cols=99 Identities=19% Similarity=0.270 Sum_probs=52.4
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc-----------hHHHHHhh-hc
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI-----------NAISYIIH-EV 523 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D-----------sAv~~~M~-~V 523 (658)
.+++|.|.+.++..+++.+.+.| -+|++.+ |.+.|.. ..+...|+.+..+.. ..+-..+. ++
T Consensus 88 ~v~~t~g~~~al~~~~~~~~~~g--d~Vl~~~--~~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~ 161 (411)
T 2o0r_A 88 EVLVTVGATEAIAAAVLGLVEPG--SEVLLIE--PFYDSYS--PVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRT 161 (411)
T ss_dssp SEEEEEHHHHHHHHHHHHHCCTT--CEEEEEE--SCCTTHH--HHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCTTE
T ss_pred eEEEeCCHHHHHHHHHHHhcCCC--CEEEEeC--CCcHhHH--HHHHHcCCEEEEeeccccccCCCCCHHHHHHhhccCc
Confidence 78888888888876666554333 3566643 5555543 234567887766642 12222222 33
Q ss_pred cEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 524 TRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 524 d~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
..|++- .--...|.++..-=--.|+-+|++|++.+++
T Consensus 162 ~~v~l~-~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 198 (411)
T 2o0r_A 162 RALIIN-SPHNPTGAVLSATELAAIAEIAVAANLVVIT 198 (411)
T ss_dssp EEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEEe-CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 334331 1111223322211114677789999998776
No 246
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=34.02 E-value=1.6e+02 Score=29.77 Aligned_cols=101 Identities=14% Similarity=0.150 Sum_probs=53.3
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch-------HHHHHhh----h
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN-------AISYIIH----E 522 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds-------Av~~~M~----~ 522 (658)
...+++|.|.+.++..+++.+.+.| -+|++.+ |.+.|.. ..+...|+.+..+... -+..+-+ +
T Consensus 101 ~~~v~~~~g~t~al~~~~~~l~~~g--d~Vl~~~--~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 174 (389)
T 1o4s_A 101 PDQVVVTNGAKQALFNAFMALLDPG--DEVIVFS--PVWVSYI--PQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGK 174 (389)
T ss_dssp GGGEEEESHHHHHHHHHHHHHCCTT--CEEEEEE--SCCTTHH--HHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTT
T ss_pred HHHEEEecCHHHHHHHHHHHhCCCC--CEEEEcC--CCchhHH--HHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccC
Confidence 3467888777778866666553333 3566554 4455533 2344578888777532 1222222 2
Q ss_pred ccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 523 VTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 523 Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
+..|++ ..--...|.++..-=--.|+-+|++|++.+++
T Consensus 175 ~~~v~~-~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 212 (389)
T 1o4s_A 175 TKAVLI-NSPNNPTGVVYRREFLEGLVRLAKKRNFYIIS 212 (389)
T ss_dssp EEEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred ceEEEE-cCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 333433 11111234443322234566788899987776
No 247
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=33.46 E-value=1.4e+02 Score=30.29 Aligned_cols=109 Identities=13% Similarity=0.096 Sum_probs=55.9
Q ss_pred CCEEEeeCChHHHHHHH-HHHH-HcCCeeEEEEeCCCCCch--------HHHHHHHHHhC-C----Cc---EEEE-cc--
Q 006152 455 GDVLLTYGSSSAVEMIL-QHAH-ELGKQFRVVIVDSRPKHE--------GKLLLRRLVRK-G----LS---CTYT-HI-- 513 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL-~~A~-e~gk~f~ViV~ESRP~~E--------G~~La~eL~~~-G----I~---vT~I-~D-- 513 (658)
+.+||..|-+.-|..-| +.+. ++| .+|+++.-.+... -..+...|.+. + -. ++++ .|
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~ 79 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTN--HSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVR 79 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCC--CEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCC--CEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCC
Confidence 34677777665444333 3444 455 5777775433321 22332323332 1 02 3333 33
Q ss_pred --hHHHHHhh--h-ccEEEEcceeEecCC--------CeecccchHHHHHHHhhCCCCeEeeccc
Q 006152 514 --NAISYIIH--E-VTRVFLGASSVLSNG--------TVCSRVGTACVAMVAYGFHIPVLVCCEA 565 (658)
Q Consensus 514 --sAv~~~M~--~-Vd~VlvGAdaV~aNG--------~VvNKiGT~~lAl~Ak~~~VPVyV~aet 565 (658)
..+..++. . +|.||--|-...... --+|-.||..+.-+|+.+++.-+|.+.+
T Consensus 80 d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS 144 (397)
T 1gy8_A 80 NEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSS 144 (397)
T ss_dssp CHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECC
Confidence 34555665 3 676665543221100 0135679999999999998865555444
No 248
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=33.40 E-value=1.5e+02 Score=28.95 Aligned_cols=99 Identities=11% Similarity=0.061 Sum_probs=53.7
Q ss_pred CEEEeeCChHHHHHHH-HHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc--hHHHHHhhhccEEEEccee
Q 006152 456 DVLLTYGSSSAVEMIL-QHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI--NAISYIIHEVTRVFLGASS 532 (658)
Q Consensus 456 dvILT~g~SsaV~~vL-~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D--sAv~~~M~~Vd~VlvGAda 532 (658)
.+||..|-+.-|..-| +.+.++| .+|+++.-++... . |. ++.+..... ..+..+++++|.||--|-.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~--~----~~--~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~~ 72 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDG--NTPIILTRSIGNK--A----IN--DYEYRVSDYTLEDLINQLNDVDAVVHLAAT 72 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCCC-------------CCEEEECCCCHHHHHHHTTTCSEEEECCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC--CEEEEEeCCCCcc--c----CC--ceEEEEccccHHHHHHhhcCCCEEEEcccc
Confidence 4678887665444333 3444455 4677665443221 1 21 554433222 3445556677777754432
Q ss_pred EecC----CCeecccchHHHHHHHhhCCCCeEeecc
Q 006152 533 VLSN----GTVCSRVGTACVAMVAYGFHIPVLVCCE 564 (658)
Q Consensus 533 V~aN----G~VvNKiGT~~lAl~Ak~~~VPVyV~ae 564 (658)
...+ ---.|-.||..+.-+|+..+++-+|.+.
T Consensus 73 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~S 108 (311)
T 3m2p_A 73 RGSQGKISEFHDNEILTQNLYDACYENNISNIVYAS 108 (311)
T ss_dssp CCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 2111 1124677999999999999998444433
No 249
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=33.32 E-value=1.3e+02 Score=31.71 Aligned_cols=102 Identities=17% Similarity=0.149 Sum_probs=53.5
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc-------hHHHHHhh-----
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI-------NAISYIIH----- 521 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D-------sAv~~~M~----- 521 (658)
..++++|.|.+.++..+++.+.+.| -+|++.+ |.+.|...+ +...|+.+..+.. ..+-..+.
T Consensus 140 ~~~v~~t~G~~~al~~~~~~l~~~G--d~Vlv~~--p~y~~~~~~--~~~~g~~~~~v~~~~~g~d~~~L~~~l~~~~~~ 213 (448)
T 3aow_A 140 DNDIMITSGSQQALDLIGRVFLNPG--DIVVVEA--PTYLAALQA--FNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQ 213 (448)
T ss_dssp TSEEEEESSHHHHHHHHHHHHCCTT--CEEEEEE--SCCHHHHHH--HHTTCCEEEEEEEETTEECHHHHHHHHHHHHHT
T ss_pred hhhEEEeCcHHHHHHHHHHHHcCCC--CEEEEeC--CChHHHHHH--HHHcCCEEEEeccCCCCCCHHHHHHHHhhhhcc
Confidence 3467888888888866666554334 3555543 667665433 3456887766642 23444443
Q ss_pred --hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 522 --EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 522 --~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
++.+|++=..--...|.++..-=--.|+-+|+.|++.+++
T Consensus 214 ~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~ 255 (448)
T 3aow_A 214 GKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVE 255 (448)
T ss_dssp TCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 2323322111111123333221123577788999987765
No 250
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=32.87 E-value=1e+02 Score=31.44 Aligned_cols=101 Identities=16% Similarity=0.113 Sum_probs=52.9
Q ss_pred cCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCc-EEEEcchHH-HHH--h---hhccE
Q 006152 453 RDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLS-CTYTHINAI-SYI--I---HEVTR 525 (658)
Q Consensus 453 ~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~-vT~I~DsAv-~~~--M---~~Vd~ 525 (658)
....+++|-|.+.++.. +..+...| -+|++.+ |.+.|... .+...|+. +.++....- .+. + .++..
T Consensus 94 ~~~~v~~~~G~~~al~~-~~~~~~~g--d~Vl~~~--p~y~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 166 (400)
T 3asa_A 94 DAKEIFISDGAKVDLFR-LLSFFGPN--QTVAIQD--PSYPAYLD--IARLTGAKEIIALPCLQENAFFPEFPEDTHIDI 166 (400)
T ss_dssp CGGGEEEESCHHHHHHH-HHHHHCSS--CEEEEEE--SCCHHHHH--HHHHTTCSEEEEEECCGGGTTCCCCCTTCCCSE
T ss_pred CHHHEEEccChHHHHHH-HHHHcCCC--CEEEECC--CCcHHHHH--HHHHcCCcceEecccchhcCcccChhhccCccE
Confidence 34467888887777755 44454333 3566643 67766543 34557888 777753211 111 1 23445
Q ss_pred EEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 526 VFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 526 VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
|++- ..-...|.++..-=-..|+-+|++|++.+++
T Consensus 167 v~l~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 201 (400)
T 3asa_A 167 LCLC-SPNNPTGTVLNKDQLRAIVHYAIEHEILILF 201 (400)
T ss_dssp EEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEe-CCCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 5542 1112224333321122466678999987664
No 251
>2z1d_A Hydrogenase expression/formation protein HYPD; [NIFE] hydrogenase maturation, [4Fe-4S] cluster, thiol redox binding protein; HET: CSW; 2.07A {Thermococcus kodakarensis}
Probab=32.69 E-value=61 Score=34.75 Aligned_cols=49 Identities=16% Similarity=0.247 Sum_probs=41.7
Q ss_pred EEcchHHHHHhhhccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEee
Q 006152 510 YTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVC 562 (658)
Q Consensus 510 ~I~DsAv~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~ 562 (658)
..+..++.++|..=+ .-|.++.=|.|..-+|+-.---+|.+|++|++|.
T Consensus 178 ~l~pPa~~all~~~~----~idgfi~PGHVstIiG~~~y~~l~~~y~~P~VVa 226 (372)
T 2z1d_A 178 RLTPPAVEVLLKQGT----VFQGLIAPGHVSTIIGVKGWEYLTEKYGIPQVVA 226 (372)
T ss_dssp ECHHHHHHHHHHTSC----CCSEEEEEHHHHHHHTTHHHHHHHHHHCCCEEEE
T ss_pred cccHHHHHHHHcCCC----cCcEEEecCeeeEEeccchhHHHHHHcCCCEEEc
Confidence 345678888887655 6678888899999999999999999999999886
No 252
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=32.66 E-value=98 Score=33.12 Aligned_cols=97 Identities=15% Similarity=0.115 Sum_probs=54.3
Q ss_pred eeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHH--------HHHHhCCCcEEEEcc--------hHHHHHhh--
Q 006152 460 TYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLL--------RRLVRKGLSCTYTHI--------NAISYIIH-- 521 (658)
Q Consensus 460 T~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La--------~eL~~~GI~vT~I~D--------sAv~~~M~-- 521 (658)
|.+.+.++..+|....+.| -+|++.+..++..-.++. ..|...|+.++.+.. ..+-..+.
T Consensus 97 ~~sGt~Ai~~al~all~pG--D~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~ 174 (427)
T 3i16_A 97 FVNGTHALGAALFGNLRPG--NTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKED 174 (427)
T ss_dssp CCSHHHHHHHHHHHHCCTT--CEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTC
T ss_pred CccHHHHHHHHHHHHhCCC--CEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCC
Confidence 4554555655555443333 356665533333333344 446677998888753 34444454
Q ss_pred -hccEEEEcceeEecCCCeecccchH----HHHHHHhh--CCCCeEee
Q 006152 522 -EVTRVFLGASSVLSNGTVCSRVGTA----CVAMVAYG--FHIPVLVC 562 (658)
Q Consensus 522 -~Vd~VlvGAdaV~aNG~VvNKiGT~----~lAl~Ak~--~~VPVyV~ 562 (658)
+..+|++.. +-|...|..|+. .++-+|++ |++.|+|=
T Consensus 175 ~~tklV~i~~----s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD 218 (427)
T 3i16_A 175 ESITLVHIQR----STGYGWRRALLIEDIKSIVDCVKNIRKDIICFVD 218 (427)
T ss_dssp TTEEEEEEEC----SCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCCEEEEEEc----CCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEE
Confidence 344554432 124466777763 46677888 99988864
No 253
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=32.54 E-value=2.3e+02 Score=27.91 Aligned_cols=53 Identities=28% Similarity=0.372 Sum_probs=33.5
Q ss_pred ccCCCEEEeeCChHHHHH-HHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEE
Q 006152 452 IRDGDVLLTYGSSSAVEM-ILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYT 511 (658)
Q Consensus 452 I~dgdvILT~g~SsaV~~-vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I 511 (658)
++.|++||.+|.+..+.. ++..|+..|- +|++++..+.. .+++ .+.|...++-
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga--~Vi~~~~~~~~--~~~~---~~~ga~~~~~ 176 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGL--RVLAAASRPEK--LALP---LALGAEEAAT 176 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTC--EEEEEESSGGG--SHHH---HHTTCSEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHH---HhcCCCEEEE
Confidence 788999999998554433 3445555564 79988876543 2333 3457765443
No 254
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=32.42 E-value=2e+02 Score=28.88 Aligned_cols=103 Identities=11% Similarity=0.089 Sum_probs=56.1
Q ss_pred cCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch------HHHHHhh----h
Q 006152 453 RDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN------AISYIIH----E 522 (658)
Q Consensus 453 ~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds------Av~~~M~----~ 522 (658)
....+++|.|.+.++..+++.+.+.|+ -+|++.+ |.+.+.. ..+...|+.+..+... -+..+-+ +
T Consensus 98 ~~~~i~~~~g~~~al~~~~~~l~~~g~-d~vl~~~--p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~ 172 (398)
T 3ele_A 98 NADNLYMTMGAAASLSICFRALTSDAY-DEFITIA--PYFPEYK--VFVNAAGARLVEVPADTEHFQIDFDALEERINAH 172 (398)
T ss_dssp CGGGEEEESSHHHHHHHHHHHHCCSTT-CEEEEES--SCCTHHH--HHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCTT
T ss_pred ChHHEEEccCHHHHHHHHHHHHcCCCC-CEEEEeC--CCchhhH--HHHHHcCCEEEEEecCCcCCcCCHHHHHHHhCcC
Confidence 345678888888888766666544341 3555543 5555543 3345678888888632 1222222 3
Q ss_pred ccEEEEcceeEecCCCeecccchHHHHHHHhh------CCCCeEe
Q 006152 523 VTRVFLGASSVLSNGTVCSRVGTACVAMVAYG------FHIPVLV 561 (658)
Q Consensus 523 Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~------~~VPVyV 561 (658)
+..|++- .--...|.++..---..++-+|+. |++.+++
T Consensus 173 ~~~v~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~ 216 (398)
T 3ele_A 173 TRGVIIN-SPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIA 216 (398)
T ss_dssp EEEEEEC-SSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEE
T ss_pred CCEEEEc-CCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEE
Confidence 4455442 222223444443333455567777 8887765
No 255
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=32.41 E-value=81 Score=30.99 Aligned_cols=74 Identities=15% Similarity=0.267 Sum_probs=43.5
Q ss_pred EEEeeCChHHHHHHHHHHHHcCC-eeEEEE-eCCCCCchHHHHHHHHHhCCCcEEEEcc----------hHHHHHhh--h
Q 006152 457 VLLTYGSSSAVEMILQHAHELGK-QFRVVI-VDSRPKHEGKLLLRRLVRKGLSCTYTHI----------NAISYIIH--E 522 (658)
Q Consensus 457 vILT~g~SsaV~~vL~~A~e~gk-~f~ViV-~ESRP~~EG~~La~eL~~~GI~vT~I~D----------sAv~~~M~--~ 522 (658)
.||.-|+++.++.+|. +.+.|. ..+|.+ +-.+|...+.+ .-.+.|||+.++.. ..+...++ +
T Consensus 6 avl~Sg~Gsnl~ali~-~~~~~~l~~eI~~Visn~~~a~v~~---~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~ 81 (211)
T 3p9x_A 6 AIFASGSGTNAEAIIQ-SQKAGQLPCEVALLITDKPGAKVVE---RVKVHEIPVCALDPKTYPSKEAYEIEVVQQLKEKQ 81 (211)
T ss_dssp EEECCTTCHHHHHHHH-HHHTTCCSSEEEEEEESCSSSHHHH---HHHTTTCCEEECCGGGSSSHHHHHHHHHHHHHHTT
T ss_pred EEEEeCCchHHHHHHH-HHHcCCCCcEEEEEEECCCCcHHHH---HHHHcCCCEEEeChhhcCchhhhHHHHHHHHHhcC
Confidence 4777788999976555 455554 233332 22456654444 33467999987753 23444454 6
Q ss_pred ccEEEEcc-eeEe
Q 006152 523 VTRVFLGA-SSVL 534 (658)
Q Consensus 523 Vd~VlvGA-daV~ 534 (658)
+|.+++-+ -.|+
T Consensus 82 ~Dliv~agy~~Il 94 (211)
T 3p9x_A 82 IDFVVLAGYMRLV 94 (211)
T ss_dssp CCEEEESSCCSCC
T ss_pred CCEEEEeCchhhc
Confidence 88888754 3444
No 256
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=32.17 E-value=1.1e+02 Score=26.97 Aligned_cols=54 Identities=13% Similarity=0.249 Sum_probs=36.8
Q ss_pred EEeeCCh-HHHHHHHHHHHHcCCeeEEEEeCCCCC-chHHHHHHHHHhCCCcEEEE
Q 006152 458 LLTYGSS-SAVEMILQHAHELGKQFRVVIVDSRPK-HEGKLLLRRLVRKGLSCTYT 511 (658)
Q Consensus 458 ILT~g~S-saV~~vL~~A~e~gk~f~ViV~ESRP~-~EG~~La~eL~~~GI~vT~I 511 (658)
|.++-.+ ..+...|..|.++|.+++|++....-. .........|.+.|+++.+.
T Consensus 32 i~~~~~~~~~i~~aL~~a~~rGV~Vril~~~~~~~~~~~~~~~~~L~~~gv~v~~~ 87 (155)
T 1byr_A 32 MMAYSFTAPDIMKALVAAKKRGVDVKIVIDERGNTGRASIAAMNYIANSGIPLRTD 87 (155)
T ss_dssp EEESSBCCHHHHHHHHHHHHTTCEEEEEEESTTCCSHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHCCCEEEEEEeCccccccccHHHHHHHHHCCCeEEEc
Confidence 4444333 345577888888999999988765322 23455668899999998765
No 257
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=32.15 E-value=3.3e+02 Score=27.27 Aligned_cols=102 Identities=15% Similarity=0.095 Sum_probs=52.8
Q ss_pred CCEEEeeCChHHHHHHHHHHHH-------cCCeeEEEEeCCCCCchHHHH-HHHHHh----------CCCcEEEEcchHH
Q 006152 455 GDVLLTYGSSSAVEMILQHAHE-------LGKQFRVVIVDSRPKHEGKLL-LRRLVR----------KGLSCTYTHINAI 516 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e-------~gk~f~ViV~ESRP~~EG~~L-a~eL~~----------~GI~vT~I~DsAv 516 (658)
..+++|-|.+.++..+|+.+.. .|+ -+|++.+ |.+.|... +..+.. .+..+..++-.-+
T Consensus 97 ~~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~-~~vi~~~--~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 173 (406)
T 4adb_A 97 DRVFFCNSGAEANEAALKLARKFAHDRYGSHK-SGIVAFK--NAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDI 173 (406)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHHHHTCTTC-CEEEEET--TCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTTCH
T ss_pred CeEEEeCcHHHHHHHHHHHHHHHHHhcCCCCC-cEEEEEC--CCcCCCcHHHhhccCCccccccCCCCCCCceEeCCCcH
Confidence 3677777777778777765543 232 3555543 33333322 122211 1234555532223
Q ss_pred HHHhh----hccEEEEcceeEecCCCee--cccchHHHHHHHhhCCCCeEe
Q 006152 517 SYIIH----EVTRVFLGASSVLSNGTVC--SRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 517 ~~~M~----~Vd~VlvGAdaV~aNG~Vv--NKiGT~~lAl~Ak~~~VPVyV 561 (658)
..+-. ++..|++- -+...|+++ ..-=--.|+-+|++|++++++
T Consensus 174 ~~l~~~l~~~~~~v~~~--p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~ 222 (406)
T 4adb_A 174 NSASALIDDSTCAVIVE--PIQGEGGVVPASNAFLQGLRELCNRHNALLIF 222 (406)
T ss_dssp HHHHTTCSTTEEEEEEC--SEETTTTSEECCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHhcCCeEEEEEe--CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 33322 33444443 355566655 443445677789999998776
No 258
>2wsi_A FAD synthetase; transferase, nucleotidyltransferase, nucleotide-binding; HET: FAD; 1.90A {Saccharomyces cerevisiae}
Probab=32.06 E-value=3.1e+02 Score=27.90 Aligned_cols=89 Identities=13% Similarity=0.220 Sum_probs=50.4
Q ss_pred HHHHHHHhccC--CCEEEeeCC---hHHHHHHHHHHH-Hc------------------CCeeEEEEeCC-CCCchHHHHH
Q 006152 444 IVKHAVTKIRD--GDVLLTYGS---SSAVEMILQHAH-EL------------------GKQFRVVIVDS-RPKHEGKLLL 498 (658)
Q Consensus 444 Ia~~a~~~I~d--gdvILT~g~---SsaV~~vL~~A~-e~------------------gk~f~ViV~ES-RP~~EG~~La 498 (658)
|.+.+.+.... +.+++.++. |+++..++..+. +. +..+.|+.++| ...-|-.+++
T Consensus 41 il~~~~~~~~~~~~~i~vafSGGKDS~VLL~L~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~vv~iDtg~~fpet~~fv 120 (306)
T 2wsi_A 41 LLSEIFVRWSPLNGEISFSYNGGKDCQVLLLLYLSCLWEYFFIKAQNSQFDFEFQSFPMQRLPTVFIDQEETFPTLENFV 120 (306)
T ss_dssp HHHTTTTTSCSSSSSEEEECCSCHHHHHHHHHHHHHHHHHHHHHHHHC--------CCCCCEEEEECCCTTCCHHHHHHH
T ss_pred HHHHHHHHcccccCCEEEEecCCHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCeeEEEEeCCCCCHHHHHHH
Confidence 33334444432 467888865 456656665542 11 35577666665 4555667777
Q ss_pred HHHH-hCCCcEEEEcc---------hHHHHHhh---hccEEEEccee
Q 006152 499 RRLV-RKGLSCTYTHI---------NAISYIIH---EVTRVFLGASS 532 (658)
Q Consensus 499 ~eL~-~~GI~vT~I~D---------sAv~~~M~---~Vd~VlvGAda 532 (658)
.++. +.|+++..+.- .++-.+++ ..+.+|+|.-+
T Consensus 121 ~~~~~~ygl~l~v~~~~~~~~~~l~~~~~~~~k~~p~~~aii~G~Rr 167 (306)
T 2wsi_A 121 LETSERYCLSLYESQRQSGASVNMADAFRDFIKIYPETEAIVIGIRH 167 (306)
T ss_dssp HHHHHHTTEEEEECCC-----CCHHHHHHHHHHHCTTCCEEECCCCC
T ss_pred HHHHHHcCCCEEEEeCCccccccHHHHHHHHHhhCCCCcEEEEEEec
Confidence 6664 57988876632 23333333 36778887644
No 259
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=31.87 E-value=1.8e+02 Score=29.51 Aligned_cols=102 Identities=14% Similarity=0.192 Sum_probs=52.5
Q ss_pred cCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc----------hHHHHHhh-
Q 006152 453 RDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI----------NAISYIIH- 521 (658)
Q Consensus 453 ~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D----------sAv~~~M~- 521 (658)
....+++|.|.+.++..++..+.+.| -+|++.+ |.+.|... .+...|+.+..+.. ..+-..+.
T Consensus 103 ~~~~v~~~~g~~~al~~~~~~l~~~g--d~vl~~~--p~y~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 176 (416)
T 1bw0_A 103 VKDNVVLCSGGSHGILMAITAICDAG--DYALVPQ--PGFPHYET--VCKAYGIGMHFYNCRPENDWEADLDEIRRLKDD 176 (416)
T ss_dssp CGGGEEEESHHHHHHHHHHHHHCCTT--CEEEEEE--SCCTHHHH--HHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCT
T ss_pred CcceEEEeCChHHHHHHHHHHhCCCC--CEEEEcC--CCcHhHHH--HHHHcCcEEEEeecCcccCCCCCHHHHHHHhcc
Confidence 34567888887778866666553333 3566654 55555433 34567887776642 11222222
Q ss_pred hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 522 EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 522 ~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
+..+|++ .+--...|.++.+-=--.|+-+|++|++.+++
T Consensus 177 ~~~~v~i-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 215 (416)
T 1bw0_A 177 KTKLLIV-TNPSNPCGSNFSRKHVEDIVRLAEELRLPLFS 215 (416)
T ss_dssp TEEEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred CCeEEEE-eCCCCCCCcccCHHHHHHHHHHHHHcCCEEEE
Confidence 2222322 11111223333221134466678899998776
No 260
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=31.87 E-value=2e+02 Score=24.14 Aligned_cols=79 Identities=15% Similarity=0.092 Sum_probs=44.7
Q ss_pred eeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHH--HHhh-hccEEEEcceeEecCCCeecccchHHHHHHHh---
Q 006152 480 QFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAIS--YIIH-EVTRVFLGASSVLSNGTVCSRVGTACVAMVAY--- 553 (658)
Q Consensus 480 ~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~--~~M~-~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak--- 553 (658)
..+|+|+|..+.. ...+...|.+.|..|....+..-+ .+-. ..|.||+..+ +.+. -|.-.+..+-+
T Consensus 4 ~~~iLivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvl~D~~--lp~~-----~g~~~~~~lr~~~~ 75 (136)
T 3t6k_A 4 PHTLLIVDDDDTV-AEMLELVLRGAGYEVRRAASGEEALQQIYKNLPDALICDVL--LPGI-----DGYTLCKRVRQHPL 75 (136)
T ss_dssp CCEEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHHSCCSEEEEESC--CSSS-----CHHHHHHHHHHSGG
T ss_pred CCEEEEEeCCHHH-HHHHHHHHHHCCCEEEEeCCHHHHHHHHHhCCCCEEEEeCC--CCCC-----CHHHHHHHHHcCCC
Confidence 4577777776543 223446677788877765553322 2222 5788888543 3332 24333434433
Q ss_pred hCCCCeEeecccc
Q 006152 554 GFHIPVLVCCEAY 566 (658)
Q Consensus 554 ~~~VPVyV~aety 566 (658)
..++|+++++...
T Consensus 76 ~~~~pii~~t~~~ 88 (136)
T 3t6k_A 76 TKTLPILMLTAQG 88 (136)
T ss_dssp GTTCCEEEEECTT
T ss_pred cCCccEEEEecCC
Confidence 2379999987654
No 261
>3roj_A D-fructose 1,6-bisphosphatase class 2/sedoheptulo bisphosphatase; fructose-1,6-/sedoheptulose-1,7-bisphosphatase, hydrolase; HET: AMP GOL; 2.30A {Synechocystis} PDB: 3rpl_A*
Probab=31.79 E-value=90 Score=33.38 Aligned_cols=45 Identities=24% Similarity=0.426 Sum_probs=35.4
Q ss_pred HHHcCCe---eEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHhh
Q 006152 474 AHELGKQ---FRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIH 521 (658)
Q Consensus 474 A~e~gk~---f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M~ 521 (658)
|...|+. +.|+|+| ||+++ +|..++++.|..+.+|+|.-|+-.+.
T Consensus 193 A~Al~k~v~dltV~vLD-RPRH~--~lI~eiR~~GARV~LI~DGDVa~ai~ 240 (379)
T 3roj_A 193 SDCLNRSIEELVVVVMD-RPRHK--ELIQEIRNAGARVRLISDGDVSAAIS 240 (379)
T ss_dssp HHHTTSCGGGCEEEEEC-CGGGH--HHHHHHHHHTCEEEEESSCHHHHHHH
T ss_pred HHHcCCChhHeEEEEEc-CchHH--HHHHHHHHcCCeEEEeCcCcHHHHHH
Confidence 4445654 5666666 89986 57899999999999999998887775
No 262
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=31.73 E-value=2.3e+02 Score=28.62 Aligned_cols=111 Identities=7% Similarity=0.009 Sum_probs=55.5
Q ss_pred EEEeeCChHHHHHHHHHHHHcCCeeEEE-EeCCCCCchHHHHHHHH-HhCCCcEEEEcchHHHHHhhhccEEEEcc----
Q 006152 457 VLLTYGSSSAVEMILQHAHELGKQFRVV-IVDSRPKHEGKLLLRRL-VRKGLSCTYTHINAISYIIHEVTRVFLGA---- 530 (658)
Q Consensus 457 vILT~g~SsaV~~vL~~A~e~gk~f~Vi-V~ESRP~~EG~~La~eL-~~~GI~vT~I~DsAv~~~M~~Vd~VlvGA---- 530 (658)
.|..+|.+..-...+....+....++++ |++..+. -+.++ .+.||++....|-.-..--.++|.|++..
T Consensus 4 rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~-----~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 78 (344)
T 3mz0_A 4 RIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQE-----AAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPA 78 (344)
T ss_dssp EEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHH-----HHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGGG
T ss_pred EEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHH-----HHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCchh
Confidence 4666777654333333333234557665 4454321 12222 23466555554432211113578887743
Q ss_pred -------------eeEecCCCeecccchHHHHHHHhhCCCCeEeecccccccccc
Q 006152 531 -------------SSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERV 572 (658)
Q Consensus 531 -------------daV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~aetyKf~~~~ 572 (658)
+.++.-=-..+--....+.-+|+.+++.++.++..+.|++.+
T Consensus 79 h~~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~~~~~v~~~~r~~p~~ 133 (344)
T 3mz0_A 79 HESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRLVQVGFMRRYDSGY 133 (344)
T ss_dssp HHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHSSCCEEECCGGGGSHHH
T ss_pred HHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCCEEEEEecccccCHHH
Confidence 222222223334444556667788888886566666776654
No 263
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=31.72 E-value=67 Score=32.33 Aligned_cols=95 Identities=14% Similarity=0.154 Sum_probs=49.3
Q ss_pred CCEEEeeCChHHHHHHHHHH-HHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch---------HHHHHhhhcc
Q 006152 455 GDVLLTYGSSSAVEMILQHA-HELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN---------AISYIIHEVT 524 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A-~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds---------Av~~~M~~Vd 524 (658)
..+|+|-+.+.++..+|..+ ...| -+|++.+ |.+.+.. ..+...|+.+.++... .+-..+.+=.
T Consensus 52 ~~~i~~~sgt~al~~~l~~l~~~~g--d~Vi~~~--~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 125 (373)
T 3frk_A 52 NYCIGCGNGLDALHLILKGYDIGFG--DEVIVPS--NTFIATA--LAVSYTGAKPIFVEPDIRTYNIDPSLIESAITEKT 125 (373)
T ss_dssp SEEEEESCHHHHHHHHHHHTTCCTT--CEEEEET--TSCTHHH--HHHHHHSCEEEEECEETTTTEECGGGTGGGCCTTE
T ss_pred CeEEEeCCHHHHHHHHHHHcCCCCc--CEEEECC--CCcHHHH--HHHHHcCCEEEEEeccccccCcCHHHHHHhcCCCC
Confidence 35677766666676666554 3223 3566643 4555533 3345568887777532 1111222212
Q ss_pred EEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 525 RVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 525 ~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
++|+ ..-..|.+.. --.|+-+|++|++.|++
T Consensus 126 ~~v~---~~n~~G~~~~---l~~i~~l~~~~~~~li~ 156 (373)
T 3frk_A 126 KAII---AVHLYGQPAD---MDEIKRIAKKYNLKLIE 156 (373)
T ss_dssp EEEE---EECCTTCCCC---HHHHHHHHHHHTCEEEE
T ss_pred eEEE---EECCCcCccc---HHHHHHHHHHcCCEEEE
Confidence 3333 1112343211 24677789999998886
No 264
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=31.70 E-value=3.8e+02 Score=26.23 Aligned_cols=57 Identities=21% Similarity=0.193 Sum_probs=33.8
Q ss_pred CCCcEEEEc--ch---HHHHHhhhccEEEEcceeEecCCCeecc-cchHHHHHHHhhCCCCeEeecc
Q 006152 504 KGLSCTYTH--IN---AISYIIHEVTRVFLGASSVLSNGTVCSR-VGTACVAMVAYGFHIPVLVCCE 564 (658)
Q Consensus 504 ~GI~vT~I~--Ds---Av~~~M~~Vd~VlvGAdaV~aNG~VvNK-iGT~~lAl~Ak~~~VPVyV~ae 564 (658)
.|+++++.. .+ .+-.+.+++|++++|+..- |.+-.. .|+..-.+ .++-.+||+|+=+
T Consensus 244 ~~~~~~~~~~~g~~~~~I~~~a~~adliV~G~~~~---~~~~~~l~Gsv~~~v-l~~~~~pVlvv~~ 306 (309)
T 3cis_A 244 PNVAITRVVVRDQPARQLVQRSEEAQLVVVGSRGR---GGYAGMLVGSVGETV-AQLARTPVIVARE 306 (309)
T ss_dssp TTSCEEEEEESSCHHHHHHHHHTTCSEEEEESSCS---SCCTTCSSCHHHHHH-HHHCSSCEEEECC
T ss_pred CCCcEEEEEEcCCHHHHHHHhhCCCCEEEECCCCC---CCccccccCcHHHHH-HhcCCCCEEEeCC
Confidence 488776532 22 2222334899999999752 222222 46555444 4667899999854
No 265
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=31.70 E-value=1.9e+02 Score=24.28 Aligned_cols=79 Identities=22% Similarity=0.228 Sum_probs=45.2
Q ss_pred eeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchH--HHHHhh-hccEEEEcceeEecCCCeecccchHHHHHHHhhCC
Q 006152 480 QFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINA--ISYIIH-EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFH 556 (658)
Q Consensus 480 ~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsA--v~~~M~-~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~ 556 (658)
..+|+++|..+.. ...+...|...|+.+....+.. +..+-. ..|.||+..+ +.+. -|--.+..+-+...
T Consensus 4 ~~~Ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvllD~~--l~~~-----~g~~l~~~l~~~~~ 75 (136)
T 2qzj_A 4 QTKILIIDGDKDN-CQKLKGFLEEKGISIDLAYNCEEAIGKIFSNKYDLIFLEII--LSDG-----DGWTLCKKIRNVTT 75 (136)
T ss_dssp CCEEEEECSCHHH-HHHHHHHHHTTTCEEEEESSHHHHHHHHHHCCCSEEEEESE--ETTE-----EHHHHHHHHHTTCC
T ss_pred CCeEEEEcCCHHH-HHHHHHHHHHCCCEEEEECCHHHHHHHHHhcCCCEEEEeCC--CCCC-----CHHHHHHHHccCCC
Confidence 4578888876543 2334566777788877655432 222222 5788888654 3221 23333444444458
Q ss_pred CCeEeecccc
Q 006152 557 IPVLVCCEAY 566 (658)
Q Consensus 557 VPVyV~aety 566 (658)
+|+++++...
T Consensus 76 ~~ii~ls~~~ 85 (136)
T 2qzj_A 76 CPIVYMTYIN 85 (136)
T ss_dssp CCEEEEESCC
T ss_pred CCEEEEEcCC
Confidence 9999887643
No 266
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=31.64 E-value=90 Score=33.41 Aligned_cols=96 Identities=10% Similarity=0.048 Sum_probs=54.1
Q ss_pred eeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHH-HHH--------HHHHhCCCcEEEEcc-------hHHHHHhh--
Q 006152 460 TYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGK-LLL--------RRLVRKGLSCTYTHI-------NAISYIIH-- 521 (658)
Q Consensus 460 T~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~-~La--------~eL~~~GI~vT~I~D-------sAv~~~M~-- 521 (658)
|.+.+.++..+|....+ ..-+|++.+ .|.+.|. .+. ..|...|+.+..+.. ..+-..+.
T Consensus 98 ~~sGt~A~~~al~all~--pGD~Vl~~~-~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~~~d~e~l~~~i~~~ 174 (427)
T 3hvy_A 98 FVNGTHAIGAALFGNLR--PNDTMMSIC-GMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDLKDGKVDINTVKEELKKD 174 (427)
T ss_dssp CCSHHHHHHHHHHHTCC--TTCEEEECS-SSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCCBTTBCCHHHHHHHHHHC
T ss_pred CCcHHHHHHHHHHHhcC--CCCEEEEeC-CCCchhHHHHhccccchhhhHHHHcCCEEEEecCCCCCcCHHHHHHHhhCC
Confidence 45555556555554433 334666655 3445443 343 345667998887643 44555554
Q ss_pred -hccEEEEcceeEecCCCeecccch----HHHHHHHhh--CCCCeEee
Q 006152 522 -EVTRVFLGASSVLSNGTVCSRVGT----ACVAMVAYG--FHIPVLVC 562 (658)
Q Consensus 522 -~Vd~VlvGAdaV~aNG~VvNKiGT----~~lAl~Ak~--~~VPVyV~ 562 (658)
+..+|++.... |...|..|+ -.++-+|++ |++.++|=
T Consensus 175 ~~tklV~i~~s~----gyp~nptg~v~dl~~i~~ia~~~~~g~~livD 218 (427)
T 3hvy_A 175 DSIKLIHIQRST----GYGWRKSLRIAEIAEIIKSIREVNENVIVFVD 218 (427)
T ss_dssp TTEEEEEEESSC----CSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred CCCEEEEEECCC----CCCCCccccHHHHHHHHHHHHHhCCCCEEEEE
Confidence 45556554322 335566665 356667888 89888763
No 267
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=31.54 E-value=2.4e+02 Score=28.17 Aligned_cols=96 Identities=10% Similarity=0.076 Sum_probs=52.0
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc---hHHHHHhhh-------ccE
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI---NAISYIIHE-------VTR 525 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D---sAv~~~M~~-------Vd~ 525 (658)
+.|++-+.+.++..+|.... ++.-.|++. .|.+.+. ...+...|.++..+.. ..+-..+.+ +..
T Consensus 105 ~~i~~~sGt~a~~~~l~~~~--~~gd~v~~~--~~~~~~~--~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 178 (399)
T 3tqx_A 105 DTILYSSCFDANGGLFETLL--GPEDAIISD--ELNHASI--IDGIRLCKAQRYRYKNNAMGDLEAKLKEADEKGARFKL 178 (399)
T ss_dssp EEEEESCHHHHHHTTHHHHC--CTTCEEEEE--TTCCHHH--HHHHHSCCSEEEEECTTCTTHHHHHHHHHHTTTCSSEE
T ss_pred cEEEECchHHHHHHHHHHhc--CCCCEEEEC--CcccHHH--HHHHHHcCCceeEeCCCCHHHHHHHHHhhhccCCCceE
Confidence 34444444556655554443 233345543 4556543 3345567888777752 344445543 444
Q ss_pred EEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 526 VFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 526 VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
|++.. .-...|.+.. --.|+-+|++|++.+++
T Consensus 179 v~~~~-~~nptG~~~~---l~~i~~l~~~~~~~li~ 210 (399)
T 3tqx_A 179 IATDG-VFSMDGIIAD---LKSICDLADKYNALVMV 210 (399)
T ss_dssp EEEES-EETTTTEECC---HHHHHHHHHHTTCEEEE
T ss_pred EEEeC-CCCCCCCcCC---HHHHHHHHHHcCCEEEE
Confidence 44433 2234454544 45677889999987765
No 268
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=31.49 E-value=2.3e+02 Score=28.40 Aligned_cols=105 Identities=12% Similarity=0.096 Sum_probs=54.1
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHc--------CCeeEEEEeCCCCCchHHHHH-HHHHhC----------CCcEEEEcch
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHEL--------GKQFRVVIVDSRPKHEGKLLL-RRLVRK----------GLSCTYTHIN 514 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~--------gk~f~ViV~ESRP~~EG~~La-~eL~~~----------GI~vT~I~Ds 514 (658)
...+++|-|.+.+++.+|+.+... ...-+|++.+ |.+.|..+. ..+... ...+..+..+
T Consensus 93 ~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (392)
T 3ruy_A 93 KEMVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCE--DNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYG 170 (392)
T ss_dssp CSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEET--TCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTT
T ss_pred CCEEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEc--CCcCCCCHhhhhccCChhhccccCCCCCCCeeeCcc
Confidence 346677777777787777765543 1233555543 233332222 222111 1124454422
Q ss_pred ---HHHHHhh-hccEEEEcceeEecCCCeecccc-hHHHHHHHhhCCCCeEe
Q 006152 515 ---AISYIIH-EVTRVFLGASSVLSNGTVCSRVG-TACVAMVAYGFHIPVLV 561 (658)
Q Consensus 515 ---Av~~~M~-~Vd~VlvGAdaV~aNG~VvNKiG-T~~lAl~Ak~~~VPVyV 561 (658)
.+-..+. ++..|++-. ---..|.+...-. --.|+-+|++|++.+++
T Consensus 171 d~~~l~~~l~~~~~~v~~~~-~~nptG~~~~~~~~l~~i~~l~~~~~~~li~ 221 (392)
T 3ruy_A 171 DLEALKAAITPNTAAFILEP-IQGEAGINIPPAGFLKEALEVCKKENVLFVA 221 (392)
T ss_dssp CHHHHHHHCCTTEEEEEECS-SBSTTTSBCCCTTHHHHHHHHHHTTTCEEEE
T ss_pred cHHHHHHHhccCeEEEEEeC-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 3333332 444555532 2223366665666 66678899999998876
No 269
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=31.49 E-value=2.9e+02 Score=24.93 Aligned_cols=36 Identities=6% Similarity=-0.050 Sum_probs=29.5
Q ss_pred hHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEE
Q 006152 493 EGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFL 528 (658)
Q Consensus 493 EG~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~Vlv 528 (658)
+=.++++.+.+.|+++..|+++.-+.+-+.+|.+|.
T Consensus 125 ~~~~~~~~ak~~g~~vi~iT~~~~s~L~~~ad~~l~ 160 (188)
T 1tk9_A 125 NVLEALKKAKELNMLCLGLSGKGGGMMNKLCDHNLV 160 (188)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEGGGTTHHHHCSEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCCcchHHcCCEEEE
Confidence 445666888899999999999887888888998874
No 270
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=31.48 E-value=1.9e+02 Score=23.81 Aligned_cols=80 Identities=14% Similarity=0.107 Sum_probs=44.7
Q ss_pred CeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHH-Hhh--hccEEEEcceeEecCCCeecccchHHHHHHHh-h
Q 006152 479 KQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISY-IIH--EVTRVFLGASSVLSNGTVCSRVGTACVAMVAY-G 554 (658)
Q Consensus 479 k~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~-~M~--~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak-~ 554 (658)
...+|.++|..+.. ...+...|.+.|..+....+..-+. .+. ..|.||+..+---. -|--.+..+-+ .
T Consensus 6 ~~~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~-------~g~~~~~~l~~~~ 77 (130)
T 3eod_A 6 VGKQILIVEDEQVF-RSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIAMPRM-------NGLKLLEHIRNRG 77 (130)
T ss_dssp TTCEEEEECSCHHH-HHHHHHHHHHTTCEEEEESCHHHHHHHHTTCCCSEEEECCC------------CHHHHHHHHHTT
T ss_pred CCCeEEEEeCCHHH-HHHHHHHHHhCCceEEEeCCHHHHHHHHhcCCCCEEEEecCCCCC-------CHHHHHHHHHhcC
Confidence 34578888766543 2334466777888877665533222 222 57888887653222 23333333333 3
Q ss_pred CCCCeEeecccc
Q 006152 555 FHIPVLVCCEAY 566 (658)
Q Consensus 555 ~~VPVyV~aety 566 (658)
.++|+++++...
T Consensus 78 ~~~~ii~~t~~~ 89 (130)
T 3eod_A 78 DQTPVLVISATE 89 (130)
T ss_dssp CCCCEEEEECCC
T ss_pred CCCCEEEEEcCC
Confidence 479999987754
No 271
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=31.23 E-value=1.5e+02 Score=29.11 Aligned_cols=98 Identities=13% Similarity=0.066 Sum_probs=53.5
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHH-HH-HHhCCCcEEEEcc---hHHHHHhh-hccEEEEc
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLL-RR-LVRKGLSCTYTHI---NAISYIIH-EVTRVFLG 529 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La-~e-L~~~GI~vT~I~D---sAv~~~M~-~Vd~VlvG 529 (658)
+.|++.+.+.++..++..+.+.| -+|++. .|.+.+.... .. +...|+.+.++.. ..+-..+. ++..|++
T Consensus 15 ~~i~~~sG~~a~~~~~~~~~~~g--~~v~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~- 89 (331)
T 1pff_A 15 ACAATASGMGAIAASVWTFLKAG--DHLISD--DCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEKHLKPNTRIVYF- 89 (331)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTT--CEEEEE--SCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHTCCTTEEEEEE-
T ss_pred eEEEeCChHHHHHHHHHHhcCCC--CEEEEc--CCCcchHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhcCCCeEEEE-
Confidence 45555444566655555443333 456665 4666664333 33 4568999988863 22333332 3444444
Q ss_pred ceeEecCCCeecccchHHHHHHHhh-CCCCeEe
Q 006152 530 ASSVLSNGTVCSRVGTACVAMVAYG-FHIPVLV 561 (658)
Q Consensus 530 AdaV~aNG~VvNKiGT~~lAl~Ak~-~~VPVyV 561 (658)
...--..|.+.. --.++-+|++ |++++++
T Consensus 90 ~~~~nptG~~~~---~~~i~~~~~~~~~~~li~ 119 (331)
T 1pff_A 90 ETPANPTLKVID---IEDAVKQARKQKDILVIV 119 (331)
T ss_dssp ESSCTTTCCCCC---HHHHHHHHTTSSSCEEEE
T ss_pred ECCCCCcCcccC---HHHHHHHHhhhcCCEEEE
Confidence 222222355543 3567778999 9988776
No 272
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=30.85 E-value=1.1e+02 Score=31.02 Aligned_cols=44 Identities=5% Similarity=-0.193 Sum_probs=21.5
Q ss_pred HHHHHhhhccEEEEcceeEecC----CCeecccchHHHHHHHhhCCCC
Q 006152 515 AISYIIHEVTRVFLGASSVLSN----GTVCSRVGTACVAMVAYGFHIP 558 (658)
Q Consensus 515 Av~~~M~~Vd~VlvGAdaV~aN----G~VvNKiGT~~lAl~Ak~~~VP 558 (658)
.+..++.++|.||--|-..... ---.|-.||..++-+|+.++++
T Consensus 39 ~l~~~~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~ 86 (369)
T 3st7_A 39 ELESALLKADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKK 86 (369)
T ss_dssp HHHHHHHHCSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSC
T ss_pred HHHHHhccCCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3344455566665433211100 0123556666666666666654
No 273
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=30.77 E-value=2e+02 Score=29.08 Aligned_cols=55 Identities=9% Similarity=0.081 Sum_probs=29.8
Q ss_pred CCCEEE--eeCChHHHHHHHHHHHH-cCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEc
Q 006152 454 DGDVLL--TYGSSSAVEMILQHAHE-LGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTH 512 (658)
Q Consensus 454 dgdvIL--T~g~SsaV~~vL~~A~e-~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~ 512 (658)
...+++ |.|.+.++..++..+.. -+..-+|++.+ |.+.+.. ..+...|..+..+.
T Consensus 94 ~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~--p~~~~~~--~~~~~~g~~~~~~~ 151 (401)
T 7aat_A 94 SGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPK--PSWGNHT--PIFRDAGLQLQAYR 151 (401)
T ss_dssp TTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEE--SCCTTHH--HHHHHTTCEEEEEE
T ss_pred cCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcC--CCchhHH--HHHHHcCCeeEeee
Confidence 456655 88877777544443321 12223556543 6665543 23445688777765
No 274
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=30.68 E-value=2.6e+02 Score=28.66 Aligned_cols=52 Identities=21% Similarity=0.227 Sum_probs=32.3
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEc
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTH 512 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~ 512 (658)
..+++|.|.+.++..++....+.| -+|++. .|.+.+... .+...|..+..+.
T Consensus 109 ~~i~~t~G~~~al~~~~~~l~~~g--d~Vlv~--~p~y~~~~~--~~~~~g~~~~~v~ 160 (425)
T 2r2n_A 109 MDLCVTSGSQQGLCKVFEMIINPG--DNVLLD--EPAYSGTLQ--SLHPLGCNIINVA 160 (425)
T ss_dssp EEEEEESSHHHHHHHHHHHHCCTT--CEEEEE--SSCCHHHHH--HHGGGTCEEEEEC
T ss_pred CcEEEeCcHHHHHHHHHHHhCCCC--CEEEEe--CCCcHHHHH--HHHHcCCEEEEeC
Confidence 367888887888866665554334 355554 477766443 3455788777764
No 275
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=30.68 E-value=90 Score=31.65 Aligned_cols=99 Identities=11% Similarity=0.106 Sum_probs=58.7
Q ss_pred CCCEEEeeCCh------HHHHHHHHHHHHcCCeeEEEEeCCCCCchH----HHHHHHHHhCCCcE--------EE----E
Q 006152 454 DGDVLLTYGSS------SAVEMILQHAHELGKQFRVVIVDSRPKHEG----KLLLRRLVRKGLSC--------TY----T 511 (658)
Q Consensus 454 dgdvILT~g~S------saV~~vL~~A~e~gk~f~ViV~ESRP~~EG----~~La~eL~~~GI~v--------T~----I 511 (658)
+..+|+..|+- ..+..++....+++..++++++-..|..++ ..+...+.+.|++- .. +
T Consensus 183 ~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~ 262 (413)
T 3oy2_A 183 DDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVL 262 (413)
T ss_dssp TSEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCC
T ss_pred CceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcC
Confidence 34567777762 122244444455566677776644443322 33334455678772 22 3
Q ss_pred cchHHHHHhhhccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEee
Q 006152 512 HINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVC 562 (658)
Q Consensus 512 ~DsAv~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~ 562 (658)
.+..+..+|..+|.+++-.. .. |.-...+=|-.+|+||++.
T Consensus 263 ~~~~~~~~~~~adv~v~pS~--~E--------~~~~~~lEAma~G~PvI~s 303 (413)
T 3oy2_A 263 TDERVDMMYNACDVIVNCSS--GE--------GFGLCSAEGAVLGKPLIIS 303 (413)
T ss_dssp CHHHHHHHHHHCSEEEECCS--CC--------SSCHHHHHHHTTTCCEEEE
T ss_pred CHHHHHHHHHhCCEEEeCCC--cC--------CCCcHHHHHHHcCCCEEEc
Confidence 35678999999999988432 11 2223456788899999974
No 276
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=30.50 E-value=36 Score=35.44 Aligned_cols=71 Identities=14% Similarity=0.234 Sum_probs=45.5
Q ss_pred ccCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc----hHHHHHhhhccEEE
Q 006152 452 IRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI----NAISYIIHEVTRVF 527 (658)
Q Consensus 452 I~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D----sAv~~~M~~Vd~Vl 527 (658)
+..+.+|+..|.+..-..+++.|++.| ++|++++..|...+..++ . -.++.+ .++-.+.+++|.|.
T Consensus 9 ~~~~~~IlIlG~G~lg~~la~aa~~lG--~~viv~d~~~~~p~~~~a----d----~~~~~~~~d~~~l~~~~~~~dvi~ 78 (377)
T 3orq_A 9 LKFGATIGIIGGGQLGKMMAQSAQKMG--YKVVVLDPSEDCPCRYVA----H----EFIQAKYDDEKALNQLGQKCDVIT 78 (377)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCTTCTTGGGS----S----EEEECCTTCHHHHHHHHHHCSEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEECCCCChhhhhC----C----EEEECCCCCHHHHHHHHHhCCcce
Confidence 456889999999987767788888766 577888876654433322 1 122221 34555566788877
Q ss_pred Eccee
Q 006152 528 LGASS 532 (658)
Q Consensus 528 vGAda 532 (658)
.+-+.
T Consensus 79 ~~~E~ 83 (377)
T 3orq_A 79 YEFEN 83 (377)
T ss_dssp ESSTT
T ss_pred ecccc
Confidence 76543
No 277
>2o0m_A Transcriptional regulator, SORC family; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: c.124.1.8
Probab=30.42 E-value=61 Score=33.57 Aligned_cols=90 Identities=7% Similarity=0.040 Sum_probs=52.4
Q ss_pred HHHHHHHH----hccC-CCEEEeeCChHHHHHHHHHHHHc---CCeeEEEEeCC----CCCchHHHHHHHHHhC-CCcEE
Q 006152 443 VIVKHAVT----KIRD-GDVLLTYGSSSAVEMILQHAHEL---GKQFRVVIVDS----RPKHEGKLLLRRLVRK-GLSCT 509 (658)
Q Consensus 443 ~Ia~~a~~----~I~d-gdvILT~g~SsaV~~vL~~A~e~---gk~f~ViV~ES----RP~~EG~~La~eL~~~-GI~vT 509 (658)
.|++.|++ +|++ |++ +-.++++++..+..+.... .++++|+-++. .|......|++.|.+. |+++.
T Consensus 126 ~ia~~AA~~l~~~i~~~~~~-igl~~GsT~~~~~~~L~~~~~~~~~v~vv~l~ggl~~~~~~~~~~i~~~la~~~~~~~~ 204 (345)
T 2o0m_A 126 DFGDVLTNTLNLLLPNGENT-IAVMGGTTMAMVAENMGSLETEKRHNLFVPARGGIGEAVSVQANSISAVMANKTGGNYR 204 (345)
T ss_dssp HHHHHHHHHHHHHCCSEEEE-EEECCSHHHHHHHHTCCCCCCSSEEEEEEESBSCCCCCGGGSHHHHHHHHHHHHTCEEC
T ss_pred HHHHHHHHHHHHhcCcCCCE-EEECCcHHHHHHHHHhhhccCCCCCcEEEEcCCcCCCCcccCHHHHHHHHHHHhCCceE
Confidence 45555555 5888 655 4568888876766655432 13466665442 2333455677888765 88776
Q ss_pred EE--cch---HH-HHHh------------hhccEEEEcceeE
Q 006152 510 YT--HIN---AI-SYII------------HEVTRVFLGASSV 533 (658)
Q Consensus 510 ~I--~Ds---Av-~~~M------------~~Vd~VlvGAdaV 533 (658)
.+ ++. .. -.++ ..+|+.|+|.-.+
T Consensus 205 ~l~~P~~~~~~~~~~l~~~~~~~~~l~~~~~~DiailGIG~~ 246 (345)
T 2o0m_A 205 ALYVPEQLSRETYNSLLQEPSIQEVLTLISHANCVVHSIGRA 246 (345)
T ss_dssp CCCCCSSCCHHHHHHHHTCHHHHHHHHHHHTCSEEEECCEEH
T ss_pred EEeccccCCHHHHHHHHhChHHHHHHHHHHcCCEEEEccCCc
Confidence 43 211 11 1112 2699999998643
No 278
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=30.32 E-value=2.9e+02 Score=27.19 Aligned_cols=109 Identities=14% Similarity=0.110 Sum_probs=58.4
Q ss_pred CCCEEEeeCChHHHHHHH-HHHHHcCCeeEEEEeCCCCCchHHHHHHHHHh-CCCcEEEEc-c----hHHHHHhh--hcc
Q 006152 454 DGDVLLTYGSSSAVEMIL-QHAHELGKQFRVVIVDSRPKHEGKLLLRRLVR-KGLSCTYTH-I----NAISYIIH--EVT 524 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL-~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~-~GI~vT~I~-D----sAv~~~M~--~Vd 524 (658)
.+.+||..|-+.-|..-| +.+.++| .+|++++-++.. ..++..++.. .+-.++++. | ..+..++. .+|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G--~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHG--YDVVIADNLVNS-KREAIARIEKITGKTPAFHETDVSDERALARIFDAHPIT 80 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTT--CEEEEECCCSSS-CTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCC--CcEEEEecCCcc-hHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCc
Confidence 356788888766554444 3444445 567777644332 2233333332 133344432 2 34566666 567
Q ss_pred EEEEcceeEecCC--------CeecccchHHHHHHHhhCCCCeEeeccc
Q 006152 525 RVFLGASSVLSNG--------TVCSRVGTACVAMVAYGFHIPVLVCCEA 565 (658)
Q Consensus 525 ~VlvGAdaV~aNG--------~VvNKiGT~~lAl~Ak~~~VPVyV~aet 565 (658)
.||--|-....+. --.|-.||..+.-+|+.+++.-+|...+
T Consensus 81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 81 AAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp EEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 6665442111000 0126678999998999998866665444
No 279
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=30.28 E-value=1.3e+02 Score=29.13 Aligned_cols=71 Identities=17% Similarity=0.205 Sum_probs=40.9
Q ss_pred EEEeeCChHHHHHHHHHHHHcCCeeEEEEeC-CCCCchHHHHHHHHHhCCCcEEEEcch----------HHHHHhh--hc
Q 006152 457 VLLTYGSSSAVEMILQHAHELGKQFRVVIVD-SRPKHEGKLLLRRLVRKGLSCTYTHIN----------AISYIIH--EV 523 (658)
Q Consensus 457 vILT~g~SsaV~~vL~~A~e~gk~f~ViV~E-SRP~~EG~~La~eL~~~GI~vT~I~Ds----------Av~~~M~--~V 523 (658)
.||..|.++....+|....+..-.+.|.++= .+|...+.+ ...+.|||+.++... .+-..++ ++
T Consensus 7 ~vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~---~A~~~gIp~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 83 (212)
T 3av3_A 7 AVFASGSGTNFQAIVDAAKRGDLPARVALLVCDRPGAKVIE---RAARENVPAFVFSPKDYPSKAAFESEILRELKGRQI 83 (212)
T ss_dssp EEECCSSCHHHHHHHHHHHTTCCCEEEEEEEESSTTCHHHH---HHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHHTTC
T ss_pred EEEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHH---HHHHcCCCEEEeCcccccchhhhHHHHHHHHHhcCC
Confidence 4677788888767666555432245543322 235544433 445789999876432 3334444 57
Q ss_pred cEEEEcc
Q 006152 524 TRVFLGA 530 (658)
Q Consensus 524 d~VlvGA 530 (658)
|.+++-+
T Consensus 84 Dliv~a~ 90 (212)
T 3av3_A 84 DWIALAG 90 (212)
T ss_dssp CEEEESS
T ss_pred CEEEEch
Confidence 8877754
No 280
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=30.24 E-value=1.1e+02 Score=29.38 Aligned_cols=105 Identities=12% Similarity=0.151 Sum_probs=63.9
Q ss_pred CCEEEeeCChHHHHHHHH-HHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEE-cc----hHHHHHhh-------
Q 006152 455 GDVLLTYGSSSAVEMILQ-HAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYT-HI----NAISYIIH------- 521 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~-~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I-~D----sAv~~~M~------- 521 (658)
+.++|..|-++-+...|. .+.++| .+|++++.+......++..+|.+.|..+.++ +| ..+..++.
T Consensus 4 ~k~~lVTGas~gIG~~ia~~l~~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 81 (246)
T 3osu_A 4 TKSALVTGASRGIGRSIALQLAEEG--YNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG 81 (246)
T ss_dssp SCEEEETTCSSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC--CEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 567777777766554443 334444 5778777766666667778888888887765 33 33444444
Q ss_pred hccEEEEcceeEecCCC-------------eecccchHHHHHHH----hhCCCCeEee
Q 006152 522 EVTRVFLGASSVLSNGT-------------VCSRVGTACVAMVA----YGFHIPVLVC 562 (658)
Q Consensus 522 ~Vd~VlvGAdaV~aNG~-------------VvNKiGT~~lAl~A----k~~~VPVyV~ 562 (658)
++|.+|--|- +...+. -+|-.|++.+.-.+ +..+...+|.
T Consensus 82 ~id~lv~nAg-~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~ 138 (246)
T 3osu_A 82 SLDVLVNNAG-ITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIIN 138 (246)
T ss_dssp CCCEEEECCC-CCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCEEEECCC-CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 5788776653 222222 13678888877766 3344444444
No 281
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=30.17 E-value=23 Score=31.25 Aligned_cols=55 Identities=9% Similarity=-0.067 Sum_probs=36.1
Q ss_pred HHhCCCcEEEE--cchHHHHHhhhccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEeecc
Q 006152 501 LVRKGLSCTYT--HINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCE 564 (658)
Q Consensus 501 L~~~GI~vT~I--~DsAv~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~ae 564 (658)
..+.||++... ..+.+...+.+.|.|++|-..-+.-. .+--.|..++|||.|+-.
T Consensus 30 a~~~gi~v~i~a~~~~~~~~~~~~~DvvLLgPQV~y~~~---------~ik~~~~~~~ipV~vI~~ 86 (108)
T 3nbm_A 30 ANLTEVRVIANSGAYGAHYDIMGVYDLIILAPQVRSYYR---------EMKVDAERLGIQIVATRG 86 (108)
T ss_dssp HHHHTCSEEEEEEETTSCTTTGGGCSEEEECGGGGGGHH---------HHHHHHTTTTCEEEECCH
T ss_pred HHHCCCceEEEEcchHHHHhhccCCCEEEEChHHHHHHH---------HHHHHhhhcCCcEEEeCH
Confidence 34567777774 34455556678999999976543221 244556778999998743
No 282
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=29.86 E-value=54 Score=32.54 Aligned_cols=104 Identities=16% Similarity=0.141 Sum_probs=56.6
Q ss_pred EEEeeCChHHHHHHH-HHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCC-CcEEEEcc----hHHHHHhhh--ccEEEE
Q 006152 457 VLLTYGSSSAVEMIL-QHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKG-LSCTYTHI----NAISYIIHE--VTRVFL 528 (658)
Q Consensus 457 vILT~g~SsaV~~vL-~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~G-I~vT~I~D----sAv~~~M~~--Vd~Vlv 528 (658)
+||..|-+.-|..-| +.+.++| .+|++++-.........+..|...+ +.+.. .| ..+..++.. +|.||-
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~-~Dl~d~~~~~~~~~~~~~d~vih 79 (347)
T 1orr_A 3 KLLITGGCGFLGSNLASFALSQG--IDLIVFDNLSRKGATDNLHWLSSLGNFEFVH-GDIRNKNDVTRLITKYMPDSCFH 79 (347)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT--CEEEEEECCCSTTHHHHHHHHHTTCCCEEEE-CCTTCHHHHHHHHHHHCCSEEEE
T ss_pred EEEEeCCCchhHHHHHHHHHhCC--CEEEEEeCCCccCchhhhhhhccCCceEEEE-cCCCCHHHHHHHHhccCCCEEEE
Confidence 577777655444333 3444555 5677765322111223345565544 43322 23 345667777 888886
Q ss_pred cceeEecC-----C---CeecccchHHHHHHHhhCCCC-eEeec
Q 006152 529 GASSVLSN-----G---TVCSRVGTACVAMVAYGFHIP-VLVCC 563 (658)
Q Consensus 529 GAdaV~aN-----G---~VvNKiGT~~lAl~Ak~~~VP-VyV~a 563 (658)
-|-....+ - --+|-.||..+.-+|+.+++. -+|.+
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~ 123 (347)
T 1orr_A 80 LAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYS 123 (347)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEe
Confidence 55322110 0 014678999999999988875 44433
No 283
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=29.85 E-value=50 Score=28.54 Aligned_cols=58 Identities=21% Similarity=0.168 Sum_probs=36.0
Q ss_pred cCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCC-CCchHHHHHHHHHhC--CCcEEEEcch
Q 006152 453 RDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSR-PKHEGKLLLRRLVRK--GLSCTYTHIN 514 (658)
Q Consensus 453 ~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESR-P~~EG~~La~eL~~~--GI~vT~I~Ds 514 (658)
..|..|.+..+.... +..+. +...|.++++|.. |...|..+++.|.+. .+++.+++..
T Consensus 25 ~~~~~v~~~~~~~~a---~~~l~-~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 85 (151)
T 3kcn_A 25 SFDFEVTTCESGPEA---LACIK-KSDPFSVIMVDMRMPGMEGTEVIQKARLISPNSVYLMLTGN 85 (151)
T ss_dssp TTTSEEEEESSHHHH---HHHHH-HSCCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEEEEEECG
T ss_pred ccCceEEEeCCHHHH---HHHHH-cCCCCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEEEEEECC
Confidence 346666666655433 22222 3445788877754 788999999888864 4566665543
No 284
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=29.85 E-value=3.4e+02 Score=26.89 Aligned_cols=69 Identities=9% Similarity=0.073 Sum_probs=39.8
Q ss_pred cCCeeEEEEeCC-CCCchHHHHHHHHHhCCCcEEEE---cchHHHHHhhhccEEEEcceeEecCCCeecccchHHHHHHH
Q 006152 477 LGKQFRVVIVDS-RPKHEGKLLLRRLVRKGLSCTYT---HINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVA 552 (658)
Q Consensus 477 ~gk~f~ViV~ES-RP~~EG~~La~eL~~~GI~vT~I---~DsAv~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~A 552 (658)
+...+++++... .+ +-+..++++....=.+.++ ...-+..+|..+|++++.. |+. .+=|
T Consensus 227 ~~~~~~lv~~~g~~~--~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~ad~~v~~S-------------~g~--~lEA 289 (376)
T 1v4v_A 227 AFPHLTFVYPVHLNP--VVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDS-------------GGL--QEEG 289 (376)
T ss_dssp HCTTSEEEEECCSCH--HHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESC-------------HHH--HHHH
T ss_pred hCCCeEEEEECCCCH--HHHHHHHHHhccCCCEEEECCCCHHHHHHHHHhCcEEEECC-------------cCH--HHHH
Confidence 344567666522 22 1123334443221256666 3346788899999987542 333 4467
Q ss_pred hhCCCCeEee
Q 006152 553 YGFHIPVLVC 562 (658)
Q Consensus 553 k~~~VPVyV~ 562 (658)
-.+|+|++++
T Consensus 290 ~a~G~PvI~~ 299 (376)
T 1v4v_A 290 AALGVPVVVL 299 (376)
T ss_dssp HHTTCCEEEC
T ss_pred HHcCCCEEec
Confidence 7899999975
No 285
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=29.76 E-value=1.5e+02 Score=32.61 Aligned_cols=113 Identities=12% Similarity=0.092 Sum_probs=67.6
Q ss_pred hccCCCEEEeeCChHHHHHHHH-HHHHcCCeeEEEEe-CCCC------------CchHHHHHHHHHhCCCcEEEEc-c--
Q 006152 451 KIRDGDVLLTYGSSSAVEMILQ-HAHELGKQFRVVIV-DSRP------------KHEGKLLLRRLVRKGLSCTYTH-I-- 513 (658)
Q Consensus 451 ~I~dgdvILT~g~SsaV~~vL~-~A~e~gk~f~ViV~-ESRP------------~~EG~~La~eL~~~GI~vT~I~-D-- 513 (658)
.++.+.++|..|-+.-+...|. ...++|.. +|+++ .-++ .....++..+|.+.|..++++. |
T Consensus 247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~-~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvt 325 (525)
T 3qp9_A 247 WWQADGTVLVTGAEEPAAAEAARRLARDGAG-HLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLT 325 (525)
T ss_dssp SSCTTSEEEESSTTSHHHHHHHHHHHHHTCC-EEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTT
T ss_pred eecCCCEEEEECCCCcHHHHHHHHHHHcCCC-EEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCC
Confidence 3566788888887766544443 34445543 23333 3222 1223566788999999888873 3
Q ss_pred --hHHHHHhhh------ccEEEEcceeEecCCCe-------------ecccchHHHHHHHhhCC-----CCeEeeccc
Q 006152 514 --NAISYIIHE------VTRVFLGASSVLSNGTV-------------CSRVGTACVAMVAYGFH-----IPVLVCCEA 565 (658)
Q Consensus 514 --sAv~~~M~~------Vd~VlvGAdaV~aNG~V-------------vNKiGT~~lAl~Ak~~~-----VPVyV~aet 565 (658)
.++..++.+ +|.||-.| .+..+|.+ .|-.|++.+.-++..+. ..++|++-+
T Consensus 326 d~~~v~~~~~~i~~~g~id~vVh~A-Gv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS 402 (525)
T 3qp9_A 326 DAEAAARLLAGVSDAHPLSAVLHLP-PTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSS 402 (525)
T ss_dssp SHHHHHHHHHTSCTTSCEEEEEECC-CCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEE
T ss_pred CHHHHHHHHHHHHhcCCCcEEEECC-cCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECC
Confidence 456666664 56666655 33444443 25578888887777765 677776554
No 286
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=29.73 E-value=1.3e+02 Score=28.24 Aligned_cols=55 Identities=15% Similarity=0.285 Sum_probs=33.6
Q ss_pred EEEeeCChHHHHHHHHHHHHcC-CeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEc
Q 006152 457 VLLTYGSSSAVEMILQHAHELG-KQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTH 512 (658)
Q Consensus 457 vILT~g~SsaV~~vL~~A~e~g-k~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~ 512 (658)
+|.||.....+...|....++. ..++|||+|....-+-.++++++.+ .-.++++.
T Consensus 6 iIp~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~~~-~~~i~~i~ 61 (255)
T 1qg8_A 6 IMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLN-DNRVRFYQ 61 (255)
T ss_dssp EEEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGGG-STTEEEEE
T ss_pred EEEcCCCHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHHhh-cCCEEEEe
Confidence 4556666666777777766543 4678888776555444455555543 45566664
No 287
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=29.52 E-value=1.3e+02 Score=31.74 Aligned_cols=102 Identities=15% Similarity=0.221 Sum_probs=55.9
Q ss_pred CCCEEEeeCChHHHHHHHHHHHH-----cCC-eeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchH---------HHH
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHE-----LGK-QFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINA---------ISY 518 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e-----~gk-~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsA---------v~~ 518 (658)
...+++|.|.+.++..+++.+.+ .|. +-+|++. +|.+.+. ...+...|+.+..+.... +-.
T Consensus 126 ~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~--~~~h~~~--~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~ 201 (497)
T 3mc6_A 126 TGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAP--VTAHAGF--DKAAYYFGMKLRHVELDPTTYQVDLGKVKK 201 (497)
T ss_dssp TCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEE--TTSCHHH--HHHHHHSCCEEEEECBCTTTCSBCTTTTGG
T ss_pred CCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEe--CCccHHH--HHHHHHcCCeEEEEecCcccCcCCHHHHHH
Confidence 35688888888777766666543 231 1356664 4555443 234455699888886322 111
Q ss_pred HhhhccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEee
Q 006152 519 IIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVC 562 (658)
Q Consensus 519 ~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~ 562 (658)
.+.+-.++|+...--...|.+.. + -.|+-+|++|+++++|=
T Consensus 202 ~i~~~~~~v~~~~p~nptG~~~~-l--~~i~~la~~~g~~livD 242 (497)
T 3mc6_A 202 FINKNTVLLVGSAPNFPHGIADD-I--EGLGKIAQKYKLPLHVD 242 (497)
T ss_dssp GCCSSEEEEEEETTCTTTCCCCS-C--TTTTTHHHHTTCCEEEE
T ss_pred HHhhCCEEEEEECCCCCCCcCCC-H--HHHHHHHHHhCCEEEEE
Confidence 12121234433322223454433 2 24667899999999873
No 288
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=29.36 E-value=2.1e+02 Score=22.90 Aligned_cols=78 Identities=17% Similarity=0.187 Sum_probs=43.4
Q ss_pred eEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHH--Hhh-hccEEEEcceeEecCCCeecccchHHHHHHHhhCCC
Q 006152 481 FRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISY--IIH-EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHI 557 (658)
Q Consensus 481 f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~--~M~-~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~V 557 (658)
.+|+|+|..+.. ...+...|...|+.+....+..-+. +.. ..|.||+..+ +.+. -|--.+..+.+...+
T Consensus 2 ~~ilivdd~~~~-~~~l~~~l~~~~~~v~~~~~~~~~~~~~~~~~~dlvi~D~~--l~~~-----~g~~~~~~l~~~~~~ 73 (121)
T 1zh2_A 2 TNVLIVEDEQAI-RRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLG--LPDG-----DGIEFIRDLRQWSAV 73 (121)
T ss_dssp CEEEEECSCHHH-HHHHHHHHHTTTCEEEEESSHHHHHHHHHHHCCSEEEEESE--ETTE-----EHHHHHHHHHTTCCC
T ss_pred cEEEEEeCCHHH-HHHHHHHHhcCCCEEEEeCCHHHHHHHHhcCCCCEEEEeCC--CCCC-----cHHHHHHHHHhCCCC
Confidence 357777766543 2234466777788776655433222 222 5788888543 3321 233334444445679
Q ss_pred CeEeecccc
Q 006152 558 PVLVCCEAY 566 (658)
Q Consensus 558 PVyV~aety 566 (658)
|+++++...
T Consensus 74 ~ii~~s~~~ 82 (121)
T 1zh2_A 74 PVIVLSARS 82 (121)
T ss_dssp CEEEEESCC
T ss_pred cEEEEECCC
Confidence 999886643
No 289
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=29.34 E-value=3.7e+02 Score=28.07 Aligned_cols=21 Identities=19% Similarity=0.360 Sum_probs=15.6
Q ss_pred CEEEeeCChHHHHHHHHHHHH
Q 006152 456 DVLLTYGSSSAVEMILQHAHE 476 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e 476 (658)
.+++|-|-+.+++.+|+.+..
T Consensus 113 ~v~~~~ggseA~~~al~~~~~ 133 (459)
T 4a6r_A 113 RVFYTNSGSESVDTMIRMVRR 133 (459)
T ss_dssp EEEEESSHHHHHHHHHHHHHH
T ss_pred EEEEeCchHHHHHHHHHHHHH
Confidence 577777778888887777654
No 290
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=29.32 E-value=1.3e+02 Score=28.98 Aligned_cols=20 Identities=30% Similarity=0.310 Sum_probs=12.2
Q ss_pred HHHHHHHHcCCeeEEEEeCC
Q 006152 469 MILQHAHELGKQFRVVIVDS 488 (658)
Q Consensus 469 ~vL~~A~e~gk~f~ViV~ES 488 (658)
.+++.+.+.|...+|+++++
T Consensus 19 ~l~~~L~~~g~~V~vv~T~~ 38 (189)
T 2ejb_A 19 KLLQVLEELDFSVDLVISRN 38 (189)
T ss_dssp HHHHHHHHTTCEEEEEECHH
T ss_pred HHHHHHHHCCCEEEEEEChh
Confidence 44555555666677777654
No 291
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=29.25 E-value=1.2e+02 Score=29.77 Aligned_cols=26 Identities=8% Similarity=-0.055 Sum_probs=19.9
Q ss_pred cccchHHHHHHHhhCCCCeEeecccc
Q 006152 541 SRVGTACVAMVAYGFHIPVLVCCEAY 566 (658)
Q Consensus 541 NKiGT~~lAl~Ak~~~VPVyV~aety 566 (658)
|-.||..+.-+|+.+++.-+|.+.+.
T Consensus 83 n~~~~~~l~~~~~~~~~~~~v~~SS~ 108 (321)
T 1e6u_A 83 NMMIESNIIHAAHQNDVNKLLFLGSS 108 (321)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEccH
Confidence 66799999999999998666655543
No 292
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=29.07 E-value=2.1e+02 Score=23.08 Aligned_cols=78 Identities=17% Similarity=0.222 Sum_probs=43.2
Q ss_pred eEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHH-Hhh--hccEEEEcceeEecCCCeecccchHHHHHHHhhCCC
Q 006152 481 FRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISY-IIH--EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHI 557 (658)
Q Consensus 481 f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~-~M~--~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~V 557 (658)
.+|+++|..+.. ...+...|...|..+....+..-+. .+. ..|.||+..+ +.+. -|.-.+..+-+...+
T Consensus 3 ~~ilivdd~~~~-~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~~dlvi~d~~--l~~~-----~g~~~~~~l~~~~~~ 74 (122)
T 1zgz_A 3 HHIVIVEDEPVT-QARLQSYFTQEGYTVSVTASGAGLREIMQNQSVDLILLDIN--LPDE-----NGLMLTRALRERSTV 74 (122)
T ss_dssp CEEEEECSSHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHHSCCSEEEEESC--CSSS-----CHHHHHHHHHTTCCC
T ss_pred cEEEEEECCHHH-HHHHHHHHHHCCCeEEEecCHHHHHHHHhcCCCCEEEEeCC--CCCC-----ChHHHHHHHHhcCCC
Confidence 367777766543 2334456777788776555432221 222 4788888543 2322 243334444445578
Q ss_pred CeEeecccc
Q 006152 558 PVLVCCEAY 566 (658)
Q Consensus 558 PVyV~aety 566 (658)
|+++++...
T Consensus 75 ~ii~~s~~~ 83 (122)
T 1zgz_A 75 GIILVTGRS 83 (122)
T ss_dssp EEEEEESSC
T ss_pred CEEEEECCC
Confidence 998887643
No 293
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=29.00 E-value=63 Score=32.89 Aligned_cols=107 Identities=17% Similarity=0.136 Sum_probs=52.8
Q ss_pred ccCCCEEEeeCChHHHHHHHHHHHHcCC---eeEEEEeCCCCCchHHHHHH-H---HHhCCCcEEEEcch---------H
Q 006152 452 IRDGDVLLTYGSSSAVEMILQHAHELGK---QFRVVIVDSRPKHEGKLLLR-R---LVRKGLSCTYTHIN---------A 515 (658)
Q Consensus 452 I~dgdvILT~g~SsaV~~vL~~A~e~gk---~f~ViV~ESRP~~EG~~La~-e---L~~~GI~vT~I~Ds---------A 515 (658)
+....+++|-|.+.++..+++.+.+.|. ..+|++.| .|.+.|..... . +...+..+..+... .
T Consensus 96 ~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 174 (417)
T 3g7q_A 96 IEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPL-APEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEH 174 (417)
T ss_dssp CCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESS-CCCHHHHHC-----CCEEECCCEEEEEGGGEEEEECCGGG
T ss_pred CCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeC-CCccccchhhccchhhhccccCcccccCCcccccccCHHH
Confidence 3445788898888888666665543322 23677754 46666654331 1 12234444444322 1
Q ss_pred HHHHhhhccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 516 ISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 516 v~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
+- +-+++..|++- .---..|.++..---..|+-+|++|++.+++
T Consensus 175 l~-~~~~~~~v~~~-~p~NptG~~~~~~~~~~l~~~a~~~~~~li~ 218 (417)
T 3g7q_A 175 LH-IGEETGMICVS-RPTNPTGNVITDEELMKLDRLANQHNIPLVI 218 (417)
T ss_dssp CC-CCTTEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred hc-cccCceEEEEC-CCCCCCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 11 11123333331 1111223333333345567789999998876
No 294
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=28.97 E-value=1.6e+02 Score=28.73 Aligned_cols=99 Identities=18% Similarity=0.263 Sum_probs=58.0
Q ss_pred CCCEEEeeCChHHHHHHHH-HHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEE-cc----hHHHHHhh------
Q 006152 454 DGDVLLTYGSSSAVEMILQ-HAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYT-HI----NAISYIIH------ 521 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~-~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I-~D----sAv~~~M~------ 521 (658)
.|.+||..|-|+-+...|. .+.++| .+|+++..++......+..+|.+.|..+.++ +| ..+..++.
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRRG--CKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF 105 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC--CEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4678888888776654443 344445 5788876554333345567788778777665 34 23333333
Q ss_pred -hccEEEEcceeEecCCCe-------------ecccchHHHHHHHhhC
Q 006152 522 -EVTRVFLGASSVLSNGTV-------------CSRVGTACVAMVAYGF 555 (658)
Q Consensus 522 -~Vd~VlvGAdaV~aNG~V-------------vNKiGT~~lAl~Ak~~ 555 (658)
++|.||--|- +...+.+ +|-.|++.+.-.+..+
T Consensus 106 g~iD~lv~~Ag-~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 152 (283)
T 1g0o_A 106 GKLDIVCSNSG-VVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKH 152 (283)
T ss_dssp SCCCEEEECCC-CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCCCEEEECCC-cCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4787776553 2222221 4667888777666554
No 295
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=28.72 E-value=1.8e+02 Score=30.31 Aligned_cols=109 Identities=9% Similarity=0.014 Sum_probs=60.7
Q ss_pred CCEEEeeCChHHHHHHHHH-HHHcCCeeEEEEeCCCCCchHHHHHHHHHhC----CCcEEEE----cch-HHHHHhh--h
Q 006152 455 GDVLLTYGSSSAVEMILQH-AHELGKQFRVVIVDSRPKHEGKLLLRRLVRK----GLSCTYT----HIN-AISYIIH--E 522 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~-A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~----GI~vT~I----~Ds-Av~~~M~--~ 522 (658)
|.+||..|-+.-+..-|.+ +.+.| ..+|++++-.+ ..-..+..+|.+. +..++++ .|. .+..++. +
T Consensus 35 ~k~vLVTGatG~IG~~l~~~L~~~g-~~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~ 112 (399)
T 3nzo_A 35 QSRFLVLGGAGSIGQAVTKEIFKRN-PQKLHVVDISE-NNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQ 112 (399)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTC-CSEEEEECSCH-HHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCC
T ss_pred CCEEEEEcCChHHHHHHHHHHHHCC-CCEEEEEECCc-chHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCC
Confidence 5788888876555444443 33344 24677776432 2223344555542 2345544 222 2344443 6
Q ss_pred ccEEEEcceeEec----C------CCeecccchHHHHHHHhhCCCCeEeeccc
Q 006152 523 VTRVFLGASSVLS----N------GTVCSRVGTACVAMVAYGFHIPVLVCCEA 565 (658)
Q Consensus 523 Vd~VlvGAdaV~a----N------G~VvNKiGT~~lAl~Ak~~~VPVyV~aet 565 (658)
+|.||--|-.... | .--.|-.||..++-+|+.+++.-+|...+
T Consensus 113 ~D~Vih~Aa~~~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~gv~r~V~iSS 165 (399)
T 3nzo_A 113 YDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAKKYFCVST 165 (399)
T ss_dssp CSEEEECCCCCCGGGGSSHHHHHHHHHHHTHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCEEEECCCcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 8887754422110 0 11256789999999999999876666555
No 296
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=28.66 E-value=2.8e+02 Score=29.64 Aligned_cols=103 Identities=13% Similarity=0.101 Sum_probs=51.6
Q ss_pred cCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEc-c---------hHHHHHhhh
Q 006152 453 RDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTH-I---------NAISYIIHE 522 (658)
Q Consensus 453 ~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~-D---------sAv~~~M~~ 522 (658)
...++++|-|.+.++..++.... .+..-.|+|.+ |.+.+.. ..+...|..+..+. | ..+-..+.+
T Consensus 156 ~~~~i~~t~G~~~al~~~~~~l~-~~~gd~Vlv~~--p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 230 (500)
T 3tcm_A 156 NADDIFLTDGASPGVHLMMQLLI-RNEKDGILVPI--PQYPLYS--ASIALHGGALVPYYLNESTGWGLETSDVKKQLED 230 (500)
T ss_dssp CGGGEEEESSSHHHHHHHHHHHC-CSTTEEEEEEE--SCCTHHH--HHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHH
T ss_pred CcccEEEcCCHHHHHHHHHHHHc-CCCCCEEEEeC--CCcHhHH--HHHHHcCCEEEEEecccccCCCCCHHHHHHHHHH
Confidence 34578888888888865555442 12233555543 5554433 33444677666553 2 223333332
Q ss_pred -------ccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 523 -------VTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 523 -------Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
+..|++- .-=-.-|.+++.----.|+-+|++|++.+++
T Consensus 231 ~~~~~~~~k~ivl~-~p~NPtG~~~s~~~l~~i~~la~~~~~~li~ 275 (500)
T 3tcm_A 231 ARSRGINVRALVVI-NPGNPTGQVLAEENQYDIVKFCKNEGLVLLA 275 (500)
T ss_dssp HHHTTCEEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHhcCCCceEEEEE-CCCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 2233221 1111123344333334566668888887765
No 297
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=28.31 E-value=1.5e+02 Score=30.53 Aligned_cols=73 Identities=21% Similarity=0.300 Sum_probs=44.1
Q ss_pred EEEeeCChHHHHHHHHHHHHcCC-eeEEE-EeCCCCCchHHHHHHHHHhCCCcEEEEcc---------hHHHHHhh--hc
Q 006152 457 VLLTYGSSSAVEMILQHAHELGK-QFRVV-IVDSRPKHEGKLLLRRLVRKGLSCTYTHI---------NAISYIIH--EV 523 (658)
Q Consensus 457 vILT~g~SsaV~~vL~~A~e~gk-~f~Vi-V~ESRP~~EG~~La~eL~~~GI~vT~I~D---------sAv~~~M~--~V 523 (658)
.||.-|+++.++.+|. +++.|. ..+|. |+-.+|...+ + -.+.|||+.+++. ..+-..++ ++
T Consensus 99 ~vl~Sg~g~~l~~ll~-~~~~g~l~~~i~~Visn~~~~~~--~---A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~ 172 (292)
T 3lou_A 99 LIMVSKLEHCLADLLF-RWKMGELKMDIVGIVSNHPDFAP--L---AAQHGLPFRHFPITADTKAQQEAQWLDVFETSGA 172 (292)
T ss_dssp EEEECSCCHHHHHHHH-HHHHTSSCCEEEEEEESSSTTHH--H---HHHTTCCEEECCCCSSCHHHHHHHHHHHHHHHTC
T ss_pred EEEEcCCCcCHHHHHH-HHHcCCCCcEEEEEEeCcHHHHH--H---HHHcCCCEEEeCCCcCCHHHHHHHHHHHHHHhCC
Confidence 5777788999976555 555553 34444 3334555432 2 3467999998762 34444555 68
Q ss_pred cEEEEcce-eEec
Q 006152 524 TRVFLGAS-SVLS 535 (658)
Q Consensus 524 d~VlvGAd-aV~a 535 (658)
|.|++-.- .|+.
T Consensus 173 Dlivla~y~~il~ 185 (292)
T 3lou_A 173 ELVILARYMQVLS 185 (292)
T ss_dssp SEEEESSCCSCCC
T ss_pred CEEEecCchhhCC
Confidence 99888543 4543
No 298
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=28.20 E-value=1.1e+02 Score=28.12 Aligned_cols=98 Identities=11% Similarity=0.051 Sum_probs=56.0
Q ss_pred EEEeeCChHHHHHH-HHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEE--cchHHHHHhhhccEEEEcceeE
Q 006152 457 VLLTYGSSSAVEMI-LQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYT--HINAISYIIHEVTRVFLGASSV 533 (658)
Q Consensus 457 vILT~g~SsaV~~v-L~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I--~DsAv~~~M~~Vd~VlvGAdaV 533 (658)
.||..|-+.-+... ++.+.++| ++|+++.-++.. ..+|. .++.+... .|... ..+..+|.||.-|-..
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~-----~~~~~-~~~~~~~~D~~d~~~-~~~~~~d~vi~~ag~~ 72 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRG--HEVTAIVRNAGK-----ITQTH-KDINILQKDIFDLTL-SDLSDQNVVVDAYGIS 72 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCSHH-----HHHHC-SSSEEEECCGGGCCH-HHHTTCSEEEECCCSS
T ss_pred eEEEEcCCchhHHHHHHHHHhCC--CEEEEEEcCchh-----hhhcc-CCCeEEeccccChhh-hhhcCCCEEEECCcCC
Confidence 47777765444433 34455556 577776554421 12232 55544332 22222 6677888888755332
Q ss_pred ecCCCeecccchHHHHHHHhhCCCCeEeecc
Q 006152 534 LSNGTVCSRVGTACVAMVAYGFHIPVLVCCE 564 (658)
Q Consensus 534 ~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~ae 564 (658)
....-.|-.||..+.-+|+..+++-+|..-
T Consensus 73 -~~~~~~~~~~~~~l~~a~~~~~~~~~v~~S 102 (221)
T 3ew7_A 73 -PDEAEKHVTSLDHLISVLNGTVSPRLLVVG 102 (221)
T ss_dssp -TTTTTSHHHHHHHHHHHHCSCCSSEEEEEC
T ss_pred -ccccchHHHHHHHHHHHHHhcCCceEEEEe
Confidence 222345778899999999998766555443
No 299
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=28.12 E-value=3e+02 Score=27.43 Aligned_cols=97 Identities=11% Similarity=0.049 Sum_probs=49.6
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc---hHHHHHhhhc---cEEEEc
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI---NAISYIIHEV---TRVFLG 529 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D---sAv~~~M~~V---d~VlvG 529 (658)
+.|++-+.+.++..++..+.+.| -.|++. .|.+.+. ...+...|..+..+.. ..+-..+.+. .++++=
T Consensus 101 ~~i~~~sGt~a~~~~~~~~~~~g--d~v~~~--~~~~~~~--~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~ 174 (384)
T 1bs0_A 101 RALLFISGFAANQAVIAAMMAKE--DRIAAD--RLSHASL--LEAASLSPSQLRRFAHNDVTHLARLLASPCPGQQMVVT 174 (384)
T ss_dssp EEEEESCHHHHHHHHHHHHCCTT--CEEEEE--TTCCHHH--HHHHHTSSSEEEEECTTCHHHHHHHHHSCCSSCEEEEE
T ss_pred cEEEeCCcHHHHHHHHHHhCCCC--cEEEEc--ccccHHH--HHHHHHcCCCEEEeCCCCHHHHHHHHHhcCCCCeEEEE
Confidence 44544444666655555443223 344443 3555432 2344557888877753 2333334432 333332
Q ss_pred ceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 530 ASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 530 AdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
..--...|.+.. --.|+-+|++|++.+++
T Consensus 175 ~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 203 (384)
T 1bs0_A 175 EGVFSMDGDSAP---LAEIQQVTQQHNGWLMV 203 (384)
T ss_dssp ESBCTTTCCBCC---HHHHHHHHHHTTCEEEE
T ss_pred eCCCCCCCCccC---HHHHHHHHHHcCcEEEE
Confidence 222223455554 35677789999987665
No 300
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=28.12 E-value=2.4e+02 Score=28.50 Aligned_cols=72 Identities=11% Similarity=0.093 Sum_probs=44.2
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhC--CCcEEEEcchHHHHHhhhccEEE
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRK--GLSCTYTHINAISYIIHEVTRVF 527 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~--GI~vT~I~DsAv~~~M~~Vd~Vl 527 (658)
.|.++|..|.+-+-..++..+.+.|-. +|+|+ .|-.....+++.++... ++.+..+....+...+.++|.||
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~-~v~i~-~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVI 199 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQ-KLQVA-DLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVV 199 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCS-EEEEE-CSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCC-EEEEE-ECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEE
Confidence 467888888876655555555555532 34444 34444455677777654 35666665556666777788765
No 301
>3big_A Fructose-1,6-bisphosphatase class II GLPX; carbohydrate metabolism, hydrolase manganese; 1.85A {Escherichia coli} PDB: 2r8t_A 3bih_A 1ni9_A 3d1r_A*
Probab=28.06 E-value=98 Score=32.69 Aligned_cols=46 Identities=22% Similarity=0.365 Sum_probs=35.6
Q ss_pred HHHHcCCe---eEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHhh
Q 006152 473 HAHELGKQ---FRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIH 521 (658)
Q Consensus 473 ~A~e~gk~---f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M~ 521 (658)
-|...|+. +.|+|+| ||+++ .|..++++.|..+.+|+|.-++-.+.
T Consensus 148 vA~a~gk~v~dltV~vLd-RpRH~--~lI~eiR~~GArI~li~DGDVa~ai~ 196 (338)
T 3big_A 148 VAAALGKPLSELTVTILA-KPRHD--AVIAEMQQLGVRVFAIPDGDVAASIL 196 (338)
T ss_dssp HHHHHTSCGGGCEEEEEC-SGGGH--HHHHHHHHHTCEEEEESSCSHHHHHH
T ss_pred HHHHcCCChhHeEEEEEc-CchHH--HHHHHHHHcCCeEEEeCCccHHHHHH
Confidence 34445654 5666666 89986 47899999999999999988877764
No 302
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=28.04 E-value=2.9e+02 Score=28.87 Aligned_cols=103 Identities=17% Similarity=0.078 Sum_probs=54.5
Q ss_pred CEEEeeCChHHHHHHHHHHHH-cCCeeEEEEeCCCCCchHHHHH-HHHHh------CC-----CcEEEEcch--------
Q 006152 456 DVLLTYGSSSAVEMILQHAHE-LGKQFRVVIVDSRPKHEGKLLL-RRLVR------KG-----LSCTYTHIN-------- 514 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e-~gk~f~ViV~ESRP~~EG~~La-~eL~~------~G-----I~vT~I~Ds-------- 514 (658)
.+++|-|-+.+++..|+.|.. .|+ -+|++.+ +.+.|..+. ..+.. .+ -.+..++..
T Consensus 124 ~v~~~~sGseA~~~Alk~a~~~~g~-~~ii~~~--~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (451)
T 3oks_A 124 RSALFNSGSEAVENAVKIARSHTHK-PAVVAFD--HAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEF 200 (451)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHCC-CEEEEET--TCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGG
T ss_pred EEEEeCcHHHHHHHHHHHHHHhcCC-CeEEEEc--CCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCcccccccc
Confidence 577777778888888877764 343 3455443 344444332 22211 11 134444322
Q ss_pred ----------HHHHH---hhh----ccEEEEcceeEecCCCeecccc--hHHHHHHHhhCCCCeEe
Q 006152 515 ----------AISYI---IHE----VTRVFLGASSVLSNGTVCSRVG--TACVAMVAYGFHIPVLV 561 (658)
Q Consensus 515 ----------Av~~~---M~~----Vd~VlvGAdaV~aNG~VvNKiG--T~~lAl~Ak~~~VPVyV 561 (658)
.+..+ +.+ -+..++=.+-+..+|+++..-- --.|+-+|++|++.+++
T Consensus 201 g~~~~~~~~~~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~ 266 (451)
T 3oks_A 201 GKELATDGELAAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIA 266 (451)
T ss_dssp CTTTTTCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred ccccchhhHHHHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Confidence 22222 111 1233333456777777665433 34466689999997774
No 303
>3gk7_A 4-hydroxybutyrate COA-transferase; alpha/beta protein; HET: SPD; 1.85A {Clostridium aminobutyricum} PDB: 3qdq_A*
Probab=27.92 E-value=1.1e+02 Score=33.32 Aligned_cols=95 Identities=18% Similarity=0.177 Sum_probs=58.1
Q ss_pred HHHHHhccCCCEEEeeCCh---HHHHHHHHHHHHcCCeeEEEEeCC-C------C----------CchHHHHHHHHHhCC
Q 006152 446 KHAVTKIRDGDVLLTYGSS---SAVEMILQHAHELGKQFRVVIVDS-R------P----------KHEGKLLLRRLVRKG 505 (658)
Q Consensus 446 ~~a~~~I~dgdvILT~g~S---saV~~vL~~A~e~gk~f~ViV~ES-R------P----------~~EG~~La~eL~~~G 505 (658)
+.|+++|++|++|-.++.. ..|...|.+..++=+.++++-.=+ . | ++-|.. .+++.+.|
T Consensus 15 eeA~~~ik~G~~v~~~~~~~~p~~l~~al~~~~~~l~~v~l~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~i~~G 93 (448)
T 3gk7_A 15 DEAVKSIKSGDRVLFAHCVAEPPVLVEAMVANAAAYKNVTVSHMVTLGKGEYSKPEYKENFTFEGWFTSPS-TRGSIAEG 93 (448)
T ss_dssp HHHGGGCCTTCEEEECSGGGCCHHHHHHHHHTGGGCSSEEEEESSCSSCCGGGSGGGTTTEEEEESSCCTT-THHHHHHT
T ss_pred HHHHHhCCCcCEEEECCCCCCHHHHHHHHHHHHHhhcCeEEEEeeccCCccccChHHhCcEEEecCcCCHH-HHhHHhCC
Confidence 4566799999999999754 333333332222334577765411 1 1 222222 24555556
Q ss_pred -CcEEEEcchHHHHHhh----hccEEEEcceeEecCCCeec
Q 006152 506 -LSCTYTHINAISYIIH----EVTRVFLGASSVLSNGTVCS 541 (658)
Q Consensus 506 -I~vT~I~DsAv~~~M~----~Vd~VlvGAdaV~aNG~VvN 541 (658)
+..+-+..+.+..++. .+|..|+.|...-.+|.+.-
T Consensus 94 ~~~~~p~~ls~~p~~~~~g~~~~DVAli~as~~D~~Gn~s~ 134 (448)
T 3gk7_A 94 HGQFVPVFFHEVPSLIRKDIFHVDVFMVMVSPPDHNGFCCV 134 (448)
T ss_dssp SSEECCCCGGGHHHHHHTTTTCCSEEEEEECCCCTTSEEEC
T ss_pred CeeEECchHHhHHHHHHhCCCCCCEEEEEEecCCCCCcEEe
Confidence 3333345677888887 48999999999999998864
No 304
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=27.89 E-value=1.2e+02 Score=31.60 Aligned_cols=52 Identities=17% Similarity=0.230 Sum_probs=32.5
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEc
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTH 512 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~ 512 (658)
..+++|.|.+.++..+++.+.+.| -+|++.+ |.+.+... .+...|..+..+.
T Consensus 119 ~~v~~t~G~~~al~~~~~~l~~~g--d~Vlv~~--p~y~~~~~--~~~~~g~~~~~v~ 170 (447)
T 3b46_A 119 ENVTVTTGANEGILSCLMGLLNAG--DEVIVFE--PFFDQYIP--NIELCGGKVVYVP 170 (447)
T ss_dssp GGEEEESHHHHHHHHHHHHHCCTT--CEEEEEE--SCCTTHHH--HHHHTTCEEEEEE
T ss_pred hhEEEeCCHHHHHHHHHHHHcCCC--CEEEEeC--CCchhHHH--HHHHcCCEEEEEe
Confidence 367888887788877666654434 3566655 66666443 3445677766664
No 305
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=27.75 E-value=3.9e+02 Score=25.13 Aligned_cols=36 Identities=0% Similarity=-0.266 Sum_probs=26.5
Q ss_pred hHHHHHHHHHhCCCcEEEEcchHHHHHhhhc---cEEEE
Q 006152 493 EGKLLLRRLVRKGLSCTYTHINAISYIIHEV---TRVFL 528 (658)
Q Consensus 493 EG~~La~eL~~~GI~vT~I~DsAv~~~M~~V---d~Vlv 528 (658)
+=.++++.+.+.|+++..|+++.-+.+-+.+ |.+|.
T Consensus 129 ~~~~~~~~ak~~g~~vi~iT~~~~s~la~~a~~~d~~l~ 167 (201)
T 3trj_A 129 NILSAVEEAHDLEMKVIALTGGSGGALQNMYNTDDIELR 167 (201)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTCCGGGGTCCTTCEEEE
T ss_pred HHHHHHHHHHHCCCcEEEEECCCCCHHHHhhccCCEEEE
Confidence 3445567788889998888887766666677 87765
No 306
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=27.68 E-value=1.9e+02 Score=28.00 Aligned_cols=74 Identities=15% Similarity=0.232 Sum_probs=42.5
Q ss_pred EEeeCChHHHHHHHHHHHHcCCeeEEE-EeCCCCCchHHHHHHHHHhCCCcEEEEcc----------hHHHHHhh--hcc
Q 006152 458 LLTYGSSSAVEMILQHAHELGKQFRVV-IVDSRPKHEGKLLLRRLVRKGLSCTYTHI----------NAISYIIH--EVT 524 (658)
Q Consensus 458 ILT~g~SsaV~~vL~~A~e~gk~f~Vi-V~ESRP~~EG~~La~eL~~~GI~vT~I~D----------sAv~~~M~--~Vd 524 (658)
||..|.++....+|...++.+...+|. |+-.+|...|.+.+ .+.|||+.++.. ..+-..++ ++|
T Consensus 6 vl~SG~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A---~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~~D 82 (216)
T 2ywr_A 6 VLVSGRGSNLQAIIDAIESGKVNASIELVISDNPKAYAIERC---KKHNVECKVIQRKEFPSKKEFEERMALELKKKGVE 82 (216)
T ss_dssp EEECSCCHHHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHH---HHHTCCEEECCGGGSSSHHHHHHHHHHHHHHTTCC
T ss_pred EEEeCCcHHHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHH---HHcCCCEEEeCcccccchhhhhHHHHHHHHhcCCC
Confidence 444488888767776665544333443 22234555555444 457999987642 33444444 688
Q ss_pred EEEEcce-eEe
Q 006152 525 RVFLGAS-SVL 534 (658)
Q Consensus 525 ~VlvGAd-aV~ 534 (658)
.+++-+- .|+
T Consensus 83 liv~a~y~~il 93 (216)
T 2ywr_A 83 LVVLAGFMRIL 93 (216)
T ss_dssp EEEESSCCSCC
T ss_pred EEEEeCchhhC
Confidence 8887443 444
No 307
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=27.68 E-value=2.3e+02 Score=28.13 Aligned_cols=98 Identities=8% Similarity=0.097 Sum_probs=51.2
Q ss_pred CEEEeeCC-hHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch--------HHHHHhh-hccE
Q 006152 456 DVLLTYGS-SSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN--------AISYIIH-EVTR 525 (658)
Q Consensus 456 dvILT~g~-SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds--------Av~~~M~-~Vd~ 525 (658)
++|+..+. +.++..++..+.+.| -+|++.+ |..-|..+...+...|+.+..+... .+-..+. ++..
T Consensus 72 ~~i~~~~ggt~al~~~~~~~~~~g--d~vi~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~ 147 (376)
T 3f0h_A 72 KAVFMTCSSTGSMEAVVMNCFTKK--DKVLVID--GGSFGHRFVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDNQNFTG 147 (376)
T ss_dssp EEEEESSCHHHHHHHHHHHHCCTT--CCEEEEE--SSHHHHHHHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTTSCCCE
T ss_pred eEEEEcCChhHHHHHHHHhccCCC--CeEEEEe--CChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhccCceE
Confidence 45553333 556655555554333 3555554 2222344445566779888877532 1111122 3344
Q ss_pred EEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 526 VFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 526 VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
|++- .-=...|.+.. --.|+-+|++|++++++
T Consensus 148 v~~~-~~~nptG~~~~---l~~i~~l~~~~~~~li~ 179 (376)
T 3f0h_A 148 LLVN-VDETSTAVLYD---TMMIGEFCKKNNMFFVC 179 (376)
T ss_dssp EEEE-SEETTTTEECC---HHHHHHHHHHTTCEEEE
T ss_pred EEEe-cccCCcceecC---HHHHHHHHHHcCCEEEE
Confidence 4432 11123455444 55677889999998876
No 308
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=27.65 E-value=1.3e+02 Score=29.93 Aligned_cols=98 Identities=12% Similarity=0.173 Sum_probs=51.5
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch--------HHHHHhh-hcc
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN--------AISYIIH-EVT 524 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds--------Av~~~M~-~Vd 524 (658)
...+++|-|.+.++..++..+.+.| -+|++.+ |.+.+. ...+...|+.+..+... .+-..+. ++.
T Consensus 84 ~~~v~~~~g~t~a~~~~~~~~~~~g--d~vl~~~--~~~~~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~ 157 (363)
T 3ffh_A 84 EEELIFTAGVDELIELLTRVLLDTT--TNTVMAT--PTFVQY--RQNALIEGAEVREIPLLQDGEHDLEGMLNAIDEKTT 157 (363)
T ss_dssp GGGEEEESSHHHHHHHHHHHHCSTT--CEEEEEE--SSCHHH--HHHHHHHTCEEEEEECCTTSCCCHHHHHHHCCTTEE
T ss_pred hhhEEEeCCHHHHHHHHHHHHccCC--CEEEEcC--CChHHH--HHHHHHcCCEEEEecCCCCCCcCHHHHHHhcccCCC
Confidence 3467777777777766665554334 3566654 556553 33445568888887633 2222232 344
Q ss_pred EEEEcceeEecCCCeecccchHHHHHHHhhC--CCCeEe
Q 006152 525 RVFLGASSVLSNGTVCSRVGTACVAMVAYGF--HIPVLV 561 (658)
Q Consensus 525 ~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~--~VPVyV 561 (658)
.|++ ..--...|.++.. -.+.-+++.+ ++.+++
T Consensus 158 ~v~~-~~p~nptG~~~~~---~~l~~l~~~~~~~~~li~ 192 (363)
T 3ffh_A 158 IVWI-CNPNNPTGNYIEL---ADIQAFLDRVPSDVLVVL 192 (363)
T ss_dssp EEEE-ESSCTTTCCCCCH---HHHHHHHTTSCTTSEEEE
T ss_pred EEEE-eCCCCCcCCCcCH---HHHHHHHHhCCCCcEEEE
Confidence 5554 2222223333322 1455556665 776665
No 309
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=27.54 E-value=3.5e+02 Score=24.48 Aligned_cols=90 Identities=14% Similarity=0.114 Sum_probs=54.9
Q ss_pred HHHHHHhccCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEc-ch-HHHHHhh-
Q 006152 445 VKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTH-IN-AISYIIH- 521 (658)
Q Consensus 445 a~~a~~~I~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~-Ds-Av~~~M~- 521 (658)
.+.++++|.+...|..+|.++.- .+ +..+...|...|++|.++. |. .....+.
T Consensus 29 l~~~~~~i~~a~~I~i~G~G~S~-~~-----------------------a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 84 (187)
T 3sho_A 29 IEAAVEAICRADHVIVVGMGFSA-AV-----------------------AVFLGHGLNSLGIRTTVLTEGGSTLTITLAN 84 (187)
T ss_dssp HHHHHHHHHHCSEEEEECCGGGH-HH-----------------------HHHHHHHHHHTTCCEEEECCCTHHHHHHHHT
T ss_pred HHHHHHHHHhCCEEEEEecCchH-HH-----------------------HHHHHHHHHhcCCCEEEecCCchhHHHHHhc
Confidence 34455566666788888776532 11 1124456677889998888 33 3322333
Q ss_pred --hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEeeccc
Q 006152 522 --EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEA 565 (658)
Q Consensus 522 --~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~aet 565 (658)
+=|.||+ |...|.. .-+..++-.||..|+++++++..
T Consensus 85 ~~~~d~~i~----iS~sG~t---~~~~~~~~~ak~~g~~vi~IT~~ 123 (187)
T 3sho_A 85 LRPTDLMIG----VSVWRYL---RDTVAALAGAAERGVPTMALTDS 123 (187)
T ss_dssp CCTTEEEEE----ECCSSCC---HHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCCCEEEE----EeCCCCC---HHHHHHHHHHHHCCCCEEEEeCC
Confidence 3455543 3334533 34677788999999999998763
No 310
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=27.40 E-value=4.5e+02 Score=28.88 Aligned_cols=114 Identities=12% Similarity=0.090 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHhcc--CCCEEEeeCCh-----HHHHHHHHHHHHcCCeeEEEEeCCCCCch-HHHHHHHHHhCCCcEEEE
Q 006152 440 ADRVIVKHAVTKIR--DGDVLLTYGSS-----SAVEMILQHAHELGKQFRVVIVDSRPKHE-GKLLLRRLVRKGLSCTYT 511 (658)
Q Consensus 440 a~~~Ia~~a~~~I~--dgdvILT~g~S-----saV~~vL~~A~e~gk~f~ViV~ESRP~~E-G~~La~eL~~~GI~vT~I 511 (658)
|...+++...+.+. .+..|+.+|-. ..+ -+-+++++.|.+.+||++... ..+ .+.-...|.+.|+++.
T Consensus 35 Ag~a~a~~i~~~~~~~~~~~v~VlcG~GNNGGDGl-v~AR~L~~~G~~V~v~~~~~~-~~~~~~~~~~~~~~~g~~~~-- 110 (502)
T 3rss_A 35 AGISVVLAMEEELGNLSDYRFLVLCGGGNNGGDGF-VVARNLLGVVKDVLVVFLGKK-KTPDCEYNYGLYKKFGGKVV-- 110 (502)
T ss_dssp HHHHHHHHHHHHHSCCTTCEEEEEECSSHHHHHHH-HHHHHHTTTSSEEEEEECCSS-CCHHHHHHHHHHHHTTCCEE--
T ss_pred HHHHHHHHHHHhcCccCCCEEEEEECCCCCHHHHH-HHHHHHHHCCCeEEEEEECCC-CCHHHHHHHHHHHhCCCcee--
Confidence 44555655555554 35677777542 222 234566677888888877544 322 2333467888999875
Q ss_pred cchHHHHHhhhccEEEEcceeEecCCCeecccchHHHHH-HHhhCCCCeEe
Q 006152 512 HINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAM-VAYGFHIPVLV 561 (658)
Q Consensus 512 ~DsAv~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl-~Ak~~~VPVyV 561 (658)
. ......+...|.|| |+++--|--=.--|-+.-.+ ..+..+.||+-
T Consensus 111 ~-~~~~~~~~~~dliV---DalfG~Gl~~~l~~~~~~~i~~iN~~~~~vvA 157 (502)
T 3rss_A 111 E-QFEPSILNEFDVVV---DAIFGTGLRGEITGEYAEIINLVNKSGKVVVS 157 (502)
T ss_dssp S-CCCGGGGGGCSEEE---EESCSTTCCSCCCHHHHHHHHHHHTTCCEEEE
T ss_pred c-ccccccCCCCCEEE---EeCccCCCCCCCcHHHHHHHHHHHcCCCCEEE
Confidence 1 11112245678765 67776653222233333222 23456667653
No 311
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=27.27 E-value=4.8e+02 Score=27.74 Aligned_cols=103 Identities=17% Similarity=0.056 Sum_probs=54.8
Q ss_pred CCCEEEeeCChHHHHHHHHHHHH--------cCC----eeEEEEeCCCCCchHHHHHHHHHhCCC---cEEEEcc-----
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHE--------LGK----QFRVVIVDSRPKHEGKLLLRRLVRKGL---SCTYTHI----- 513 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e--------~gk----~f~ViV~ESRP~~EG~~La~eL~~~GI---~vT~I~D----- 513 (658)
.+..++|-|-|.++...|..+.+ .|. +..|++.+.- +-...-+ +...|+ .+..+..
T Consensus 165 ~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~--h~s~~~~--~~~~g~g~~~v~~v~~~~~~~ 240 (515)
T 2jis_A 165 SGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKEC--HYSIQKG--AAFLGLGTDSVRVVKADERGK 240 (515)
T ss_dssp SCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTS--CTHHHHH--HHHTTSCGGGEEEECBCTTSC
T ss_pred CCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCc--cHHHHHH--HHHcCCCCCcEEEEecCCCCc
Confidence 45678888877776566665531 352 4577777642 2222222 223355 7877753
Q ss_pred ---hHHHHHhhh------ccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEeec
Q 006152 514 ---NAISYIIHE------VTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCC 563 (658)
Q Consensus 514 ---sAv~~~M~~------Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~a 563 (658)
.++-..+.+ ..++|+....-...|.+. . --.|+-+|++||+.|+|=+
T Consensus 241 ~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~-~--l~~I~~la~~~g~~l~vD~ 296 (515)
T 2jis_A 241 MVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFD-P--LEAIADVCQRHGLWLHVDA 296 (515)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBC-C--HHHHHHHHHHHTCEEEEEE
T ss_pred CCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCcc-C--HHHHHHHHHHcCCeEEEeh
Confidence 233334433 134444322212234333 2 2467888999999988743
No 312
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=27.24 E-value=1.7e+02 Score=24.72 Aligned_cols=82 Identities=15% Similarity=0.182 Sum_probs=48.8
Q ss_pred CCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchH--HHHHhh-hccEEEEcceeEecCCCeecccchHHHHHHHh-
Q 006152 478 GKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINA--ISYIIH-EVTRVFLGASSVLSNGTVCSRVGTACVAMVAY- 553 (658)
Q Consensus 478 gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsA--v~~~M~-~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak- 553 (658)
....+|+|+|..+.. ...+...|...|+.|....+.. +..+-. ..|.||+..+- .+ .-|--.+..+-+
T Consensus 6 ~~~~~iLivd~~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlii~d~~l--~~-----~~g~~~~~~l~~~ 77 (147)
T 2zay_A 6 GKWWRIMLVDTQLPA-LAASISALSQEGFDIIQCGNAIEAVPVAVKTHPHLIITEANM--PK-----ISGMDLFNSLKKN 77 (147)
T ss_dssp --CEEEEEECTTGGG-GHHHHHHHHHHTEEEEEESSHHHHHHHHHHHCCSEEEEESCC--SS-----SCHHHHHHHHHTS
T ss_pred CCCceEEEEeCCHHH-HHHHHHHHHHcCCeEEEeCCHHHHHHHHHcCCCCEEEEcCCC--CC-----CCHHHHHHHHHcC
Confidence 456789998887654 3345577778898887655432 222222 58999987543 22 123333444443
Q ss_pred --hCCCCeEeeccccc
Q 006152 554 --GFHIPVLVCCEAYK 567 (658)
Q Consensus 554 --~~~VPVyV~aetyK 567 (658)
..++|+++++....
T Consensus 78 ~~~~~~pii~ls~~~~ 93 (147)
T 2zay_A 78 PQTASIPVIALSGRAT 93 (147)
T ss_dssp TTTTTSCEEEEESSCC
T ss_pred cccCCCCEEEEeCCCC
Confidence 35799999887543
No 313
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=27.24 E-value=2.9e+02 Score=25.87 Aligned_cols=102 Identities=11% Similarity=0.101 Sum_probs=61.3
Q ss_pred CCEEEeeCChH--HHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHh-CCCcEEEEcc------hHHHHHhh--hc
Q 006152 455 GDVLLTYGSSS--AVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVR-KGLSCTYTHI------NAISYIIH--EV 523 (658)
Q Consensus 455 gdvILT~g~Ss--aV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~-~GI~vT~I~D------sAv~~~M~--~V 523 (658)
|.+.|+..... .+..+.+...+.=..|++|.+++ .++.|.+ .||+|+.+.- .-+...++ +|
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT~g--------Ta~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I~~geI 83 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYATGT--------TGNLISRATGMNVNAMLSGPMGGDQQVGALISEGKI 83 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEETT--------HHHHHHHHHCCCCEEECCGGGTHHHHHHHHHHTTCC
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEccH--------HHHHHHHHhCceeEEEEecCCCCCchHHHHHHCCCc
Confidence 44555544432 12233444333323689999886 4577777 8999999842 23556665 79
Q ss_pred cEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEeeccccc
Q 006152 524 TRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYK 567 (658)
Q Consensus 524 d~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~aetyK 567 (658)
|+||-=-|-+ |.-....-.+.|=-+|-.|+||++---.+-+
T Consensus 84 dlVInt~~pl---~~~~h~~D~~~IrR~A~~~~IP~~T~latA~ 124 (152)
T 1b93_A 84 DVLIFFWDPL---NAVPHDPDVKALLRLATVWNIPVATNVATAD 124 (152)
T ss_dssp CEEEEECCTT---SCCTTHHHHHHHHHHHHHTTCCEESSHHHHH
T ss_pred cEEEEcCCcc---cCCcccccHHHHHHHHHHcCCCEEeCHHHHH
Confidence 9998533200 3222234457777899999999987544443
No 314
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=27.23 E-value=3.7e+02 Score=25.15 Aligned_cols=107 Identities=11% Similarity=0.079 Sum_probs=61.3
Q ss_pred CCCEEEeeCChHHHHHHHH-HHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEE-cc----hHHHHHhh------
Q 006152 454 DGDVLLTYGSSSAVEMILQ-HAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYT-HI----NAISYIIH------ 521 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~-~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I-~D----sAv~~~M~------ 521 (658)
.|.+||..|-+.-+..-|. .+.++| .+|++++-++ .....+..+|...|-.+.++ +| ..+..++.
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G--~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 86 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAG--ASVVVSDINA-DAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL 86 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTT--CEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCC--CEEEEEcCCH-HHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 4678888888766654443 344444 5787776443 23345567777777666655 33 34444554
Q ss_pred -hccEEEEcceeEecCCCe------------ecccchHHHHHHHh----hCCCCeEeecc
Q 006152 522 -EVTRVFLGASSVLSNGTV------------CSRVGTACVAMVAY----GFHIPVLVCCE 564 (658)
Q Consensus 522 -~Vd~VlvGAdaV~aNG~V------------vNKiGT~~lAl~Ak----~~~VPVyV~ae 564 (658)
++|.||--|-.. ..+.. +|-.|++.+.-.+. ..+...+|..-
T Consensus 87 ~~~d~vi~~Ag~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~s 145 (255)
T 1fmc_A 87 GKVDILVNNAGGG-GPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTIT 145 (255)
T ss_dssp SSCCEEEECCCCC-CCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred CCCCEEEECCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEc
Confidence 678887755322 12211 46678877776553 33555555443
No 315
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=27.18 E-value=5.2e+02 Score=26.45 Aligned_cols=95 Identities=17% Similarity=0.080 Sum_probs=50.9
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc---hHHHHHhhh-----ccEEE
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI---NAISYIIHE-----VTRVF 527 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D---sAv~~~M~~-----Vd~Vl 527 (658)
+.|++-+.+.++..+|..+. ++.-.|++. .|.+.+.. .-+...|..+..+.- ..+-.++.+ +.+|+
T Consensus 126 ~~i~~~sGs~a~~~al~~l~--~~gd~vl~~--~~~h~~~~--~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~v~ 199 (427)
T 2w8t_A 126 GAIVFSTGYMANLGIISTLA--GKGEYVILD--ADSHASIY--DGCQQGNAEIVRFRHNSVEDLDKRLGRLPKEPAKLVV 199 (427)
T ss_dssp EEEEESCHHHHHHHHHHHHS--CTTCEEEEE--TTCCHHHH--HHHHHSCSEEEEECTTCHHHHHHHHHTSCSSSCEEEE
T ss_pred ceEEecCcHHHHHHHHHHhc--CCCCEEEEC--CcccHHHH--HHHHHcCCeeEEeCCCCHHHHHHHHHhccCCCCeEEE
Confidence 45555555556655555443 333455553 35554432 233446877777643 233444443 34454
Q ss_pred EcceeEec-CCCeecccchHHHHHHHhhCCCCeEe
Q 006152 528 LGASSVLS-NGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 528 vGAdaV~a-NG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
+ +.+.. .|.+.. --.|+-+|++|++.++|
T Consensus 200 ~--~~~~n~tG~~~~---l~~l~~l~~~~g~~li~ 229 (427)
T 2w8t_A 200 L--EGVYSMLGDIAP---LKEMVAVAKKHGAMVLV 229 (427)
T ss_dssp E--ESEETTTTEECC---HHHHHHHHHHTTCEEEE
T ss_pred E--cCCCCCCCCccC---HHHHHHHHHHcCCEEEE
Confidence 4 33443 354443 35677789999987765
No 316
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=27.12 E-value=2.7e+02 Score=28.48 Aligned_cols=99 Identities=12% Similarity=0.077 Sum_probs=54.5
Q ss_pred ccCCCEEEeeCChHHHH--HHHHHHHH--cC--------CeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc------
Q 006152 452 IRDGDVLLTYGSSSAVE--MILQHAHE--LG--------KQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI------ 513 (658)
Q Consensus 452 I~dgdvILT~g~SsaV~--~vL~~A~e--~g--------k~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D------ 513 (658)
+....+++|-|.+.++. .++..... .| ..-+|+|.+ |.+.+.. ..+...|..+..+..
T Consensus 93 ~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~--p~y~~~~--~~~~~~g~~~~~v~~~~~g~d 168 (427)
T 3ppl_A 93 VPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPV--PGYDRHF--SITERFGFEMISVPMNEDGPD 168 (427)
T ss_dssp SCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEE--SCCHHHH--HHHHHTTCEEEEEEEETTEEC
T ss_pred CCcceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcC--CCcHHHH--HHHHHcCCEEEEeCCCCCCCC
Confidence 34457888988888873 44444333 21 134566543 6666643 345567888777642
Q ss_pred -hHHHHHhh--hccEEEEcceeEecCCCeecccchH-------HHHHHH-hhCCCCeEe
Q 006152 514 -NAISYIIH--EVTRVFLGASSVLSNGTVCSRVGTA-------CVAMVA-YGFHIPVLV 561 (658)
Q Consensus 514 -sAv~~~M~--~Vd~VlvGAdaV~aNG~VvNKiGT~-------~lAl~A-k~~~VPVyV 561 (658)
..+-..+. ++. .|+-+...-|..|+. .|+-+| ++|++.+++
T Consensus 169 ~~~l~~~l~~~~~~-------~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~ 220 (427)
T 3ppl_A 169 MDAVEELVKNPQVK-------GMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVW 220 (427)
T ss_dssp HHHHHHHTTSTTEE-------EEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEE
T ss_pred HHHHHHHHhcCCCe-------EEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEE
Confidence 22333332 222 233344455666653 566667 888876654
No 317
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=27.08 E-value=2.8e+02 Score=28.43 Aligned_cols=22 Identities=23% Similarity=0.155 Sum_probs=15.5
Q ss_pred CCEEEeeCChHHHHHHHHHHHH
Q 006152 455 GDVLLTYGSSSAVEMILQHAHE 476 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e 476 (658)
..+++|.|-+.+++..|+.+..
T Consensus 90 ~~v~~~~gg~ea~~~al~~~~~ 111 (430)
T 3i4j_A 90 FRFWAVSGGSEATESAVKLARQ 111 (430)
T ss_dssp CEEEEESSHHHHHHHHHHHHHH
T ss_pred CEEEEeCcHHHHHHHHHHHHHH
Confidence 3677887777788777766643
No 318
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=27.05 E-value=1.9e+02 Score=29.23 Aligned_cols=100 Identities=14% Similarity=0.119 Sum_probs=51.0
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchH-------HHHHhh----hc
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINA-------ISYIIH----EV 523 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsA-------v~~~M~----~V 523 (658)
..+++|.|.+.++..+++...+.| -+|++.+ |.+.+.. ..+...|+.+..+.... +..+-. ++
T Consensus 92 ~~i~~t~g~~~al~~~~~~l~~~g--d~Vlv~~--p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 165 (385)
T 1b5p_A 92 EETIVTVGGSQALFNLFQAILDPG--DEVIVLS--PYWVSYP--EMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRT 165 (385)
T ss_dssp GGEEEESHHHHHHHHHHHHHCCTT--CEEEEEE--SCCTHHH--HHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTTE
T ss_pred HHEEEcCChHHHHHHHHHHhcCCC--CEEEEcC--CCchhHH--HHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCCCC
Confidence 467888887777766665554333 3565543 5554433 33445788877775321 112211 22
Q ss_pred cEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 524 TRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 524 d~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
..|++ ++---..|.++.+-=-..|+-+|+.|++.|++
T Consensus 166 ~~v~~-~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 202 (385)
T 1b5p_A 166 KALVV-NSPNNPTGAVYPKEVLEALARLAVEHDFYLVS 202 (385)
T ss_dssp EEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEE-eCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 22322 11111123333222224567788899987665
No 319
>2ri0_A Glucosamine-6-phosphate deaminase; carbohydrate metabolism,; HET: BTB; 1.60A {Streptococcus mutans} PDB: 2ri1_A*
Probab=27.03 E-value=1.6e+02 Score=28.26 Aligned_cols=91 Identities=13% Similarity=0.120 Sum_probs=51.9
Q ss_pred HHHHhccC-CCEEEeeCChHHHHHHHHHHHHcC---CeeEEEEeC---CCC----CchHHHHHHHHHh-CCCcEEEEcch
Q 006152 447 HAVTKIRD-GDVLLTYGSSSAVEMILQHAHELG---KQFRVVIVD---SRP----KHEGKLLLRRLVR-KGLSCTYTHIN 514 (658)
Q Consensus 447 ~a~~~I~d-gdvILT~g~SsaV~~vL~~A~e~g---k~f~ViV~E---SRP----~~EG~~La~eL~~-~GI~vT~I~Ds 514 (658)
+..+.|.+ ++ +|-.+++++...++....+.+ ++.+|+-++ +-| ...-..+.+.|.+ .+++..++++.
T Consensus 20 ~l~~~i~~~~~-~i~ls~G~T~~~~~~~L~~~~~~~~~v~v~~ldEr~gv~~~~~~sn~~~~~~~l~~~~~~~~~~~~~~ 98 (234)
T 2ri0_A 20 MLEEEITFGAK-TLGLATGSTPLELYKEIRESHLDFSDMVSINLDEYVGLSADDKQSYAYFMKQNLFAAKPFKKSYLPNG 98 (234)
T ss_dssp HHHHHHHTTCC-EEEECCSSTTHHHHHHHHTSCCCCTTCEEEESEEETTCCTTSTTSHHHHHHHHTTTTSCCSEEECCCT
T ss_pred HHHHHHHhCCC-EEEEcCCCCHHHHHHHHHhcCCChhheEEEeCeeecCCCCCChHHHHHHHHHHHhccCCCcHhhcCCC
Confidence 33344443 46 777788877767676665422 356677655 222 2223334455554 48888887654
Q ss_pred HH----------HHHhh--hccEEEEcceeEecCCCeec
Q 006152 515 AI----------SYIIH--EVTRVFLGASSVLSNGTVCS 541 (658)
Q Consensus 515 Av----------~~~M~--~Vd~VlvGAdaV~aNG~VvN 541 (658)
.. ...++ .+|.+|+|-= .||.+..
T Consensus 99 ~~~~~~~~~~~y~~~i~~~~~Dl~llGiG---~dgh~a~ 134 (234)
T 2ri0_A 99 LAADLAKETEYYDQILAQYPIDLQILGIG---RNAHIGF 134 (234)
T ss_dssp TCSCHHHHHHHHHHHHHHSCCSEEEECCC---TTSCBTT
T ss_pred CCCCHHHHHHHHHHHHHhCCCCEEEEccC---CCCCchh
Confidence 21 11233 5899999854 6776544
No 320
>3eh7_A 4-hydroxybutyrate COA-transferase; citrate lyase, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.05A {Porphyromonas gingivalis}
Probab=27.02 E-value=1.1e+02 Score=33.14 Aligned_cols=95 Identities=12% Similarity=0.106 Sum_probs=50.6
Q ss_pred HHHHHhccCCCEEEeeCChHHHHHHHHHHHHc---CCeeEEEEeCC-CC----------------CchHHHHHHHHHhCC
Q 006152 446 KHAVTKIRDGDVLLTYGSSSAVEMILQHAHEL---GKQFRVVIVDS-RP----------------KHEGKLLLRRLVRKG 505 (658)
Q Consensus 446 ~~a~~~I~dgdvILT~g~SsaV~~vL~~A~e~---gk~f~ViV~ES-RP----------------~~EG~~La~eL~~~G 505 (658)
+.|+++|++|++|.+++....=..++....+. =+.++++..-+ .+ ++.|.. .+++.+.|
T Consensus 19 eEAv~~IkdGd~V~~~g~~g~P~~L~~ALa~r~~~l~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~i~~G 97 (434)
T 3eh7_A 19 EEAVKHIKNGERVALSHAAGVPQSCVDALVQQADLFQNVEIYHMLCLGEGKYMAPEMAPHFRHITNFVGGN-SRKAVEEN 97 (434)
T ss_dssp HHHHTTCCTTCEEEECCGGGCCHHHHHHHHHSTTTC--CEEECCBCTTCC------------------------------
T ss_pred HHHHHhCCCcCEEEECCccCCHHHHHHHHHHhHhhcCCeEEEEeccCCchhhcChhhhCeEEEecCcCCHH-HHHHHHCC
Confidence 35667899999999998553222223333222 23566653211 11 122211 12333444
Q ss_pred -CcEEEEcchHHHHHhh----hccEEEEcceeEecCCCeec
Q 006152 506 -LSCTYTHINAISYIIH----EVTRVFLGASSVLSNGTVCS 541 (658)
Q Consensus 506 -I~vT~I~DsAv~~~M~----~Vd~VlvGAdaV~aNG~VvN 541 (658)
+.+.-+..+.+..++. .+|..|+.|...-.+|.+.-
T Consensus 98 ~~~~~p~~ls~~~~~~~~g~~~~DVAli~as~~D~~Gn~s~ 138 (434)
T 3eh7_A 98 RADFIPVFFYEVPSMIRKDILHIDVAIVQLSMPDENGYCSF 138 (434)
T ss_dssp CTTCCCCCGGGHHHHHHTTSSCCSEEEEEECCCCTTSEEEC
T ss_pred CccccChhHHHHHHHHHhCCCCCcEEEEEEecCCCCCCEEe
Confidence 4444445677777776 58999999999999998864
No 321
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=26.96 E-value=2.7e+02 Score=28.25 Aligned_cols=100 Identities=10% Similarity=0.052 Sum_probs=55.2
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc---------hHHHHHhh-----
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI---------NAISYIIH----- 521 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D---------sAv~~~M~----- 521 (658)
.+++|.|.+.++..++....+.| -+|++.+ |.+.+... .+...|..+..+.. ..+-..+.
T Consensus 104 ~i~~t~g~~~al~~~~~~l~~~g--d~Vl~~~--p~~~~~~~--~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~ 177 (418)
T 3rq1_A 104 RSIATAGGTGGIHHLIHNYTEPG--DEVLTAD--WYWGAYRV--ICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAK 177 (418)
T ss_dssp EEEEESHHHHHHHHHHHHHSCTT--CEEEEES--SCCTHHHH--HHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHH
T ss_pred cEEECCchHHHHHHHHHHhcCCC--CEEEECC--CCchhHHH--HHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhcc
Confidence 56777777777766665443333 4566655 66665443 34557888877752 12223333
Q ss_pred hccEEEEccee-EecCCCeecccchHHHHHHHh------hCCCCeEe
Q 006152 522 EVTRVFLGASS-VLSNGTVCSRVGTACVAMVAY------GFHIPVLV 561 (658)
Q Consensus 522 ~Vd~VlvGAda-V~aNG~VvNKiGT~~lAl~Ak------~~~VPVyV 561 (658)
+..++++=..- --..|.++..---..++-+|+ .|++.+++
T Consensus 178 ~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~ 224 (418)
T 3rq1_A 178 QTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGI 224 (418)
T ss_dssp CSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEE
T ss_pred CCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEE
Confidence 23323322111 234466666666566777777 77776654
No 322
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=26.89 E-value=2.3e+02 Score=28.92 Aligned_cols=99 Identities=5% Similarity=-0.123 Sum_probs=57.4
Q ss_pred CEEEeeC-ChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcE--EEEcc-hHHHHHhhhccEEEEcce
Q 006152 456 DVLLTYG-SSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSC--TYTHI-NAISYIIHEVTRVFLGAS 531 (658)
Q Consensus 456 dvILT~g-~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~v--T~I~D-sAv~~~M~~Vd~VlvGAd 531 (658)
..|+..| .+.+=..++..+.++|.-.+|+++|-.+. +| .+.+|.+...+. +.+.+ ......++.+|.||+-|-
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~--~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag 85 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PG--VTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAG 85 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HH--HHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-Hh--HHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCC
Confidence 4688888 44322222333345565467887876554 44 345676654443 32222 345567899999999876
Q ss_pred eEecCCC------eecccchHHHHHHHhhCCC
Q 006152 532 SVLSNGT------VCSRVGTACVAMVAYGFHI 557 (658)
Q Consensus 532 aV~aNG~------VvNKiGT~~lAl~Ak~~~V 557 (658)
.-...|. -.|--++..++-.+++++.
T Consensus 86 ~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p 117 (326)
T 1smk_A 86 VPRKPGMTRDDLFKINAGIVKTLCEGIAKCCP 117 (326)
T ss_dssp CCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCT
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 4444442 2444677788777776653
No 323
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=26.79 E-value=71 Score=29.70 Aligned_cols=73 Identities=15% Similarity=0.124 Sum_probs=48.2
Q ss_pred EEEee-----CChHHHHHHHHHHHH-cCC--eeEEEEeCCCCCchH----HHHHHHHHhCCCcEEEEcchHHHHHhhhcc
Q 006152 457 VLLTY-----GSSSAVEMILQHAHE-LGK--QFRVVIVDSRPKHEG----KLLLRRLVRKGLSCTYTHINAISYIIHEVT 524 (658)
Q Consensus 457 vILT~-----g~SsaV~~vL~~A~e-~gk--~f~ViV~ESRP~~EG----~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd 524 (658)
.||.. |+|...|.++++..+ .|. .|.|.-.-+.|+..| .+....|.+.||+.....-.--...+.+.|
T Consensus 6 ~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~~~~ar~l~~~~~~~~D 85 (161)
T 3jvi_A 6 KLLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSYHEGQQADSRMRKVGKSRGYQVDSISRPVVSSDFKNFD 85 (161)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESCCTTTTCBCCHHHHHHHHHTTCCCCCBCCBCCHHHHHHCS
T ss_pred EEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCCcccCCCCCHHHHHHHHHcCcCCCCeeeECCHHHhcCCC
Confidence 45655 457888888887654 443 688888888887666 344588999999864322222233456788
Q ss_pred EEEEc
Q 006152 525 RVFLG 529 (658)
Q Consensus 525 ~VlvG 529 (658)
.||.=
T Consensus 86 lIl~M 90 (161)
T 3jvi_A 86 YIFAM 90 (161)
T ss_dssp EEEES
T ss_pred EEEEe
Confidence 88653
No 324
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=26.57 E-value=2.8e+02 Score=28.06 Aligned_cols=100 Identities=15% Similarity=0.116 Sum_probs=50.0
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch-------HHHHHhh----hc
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN-------AISYIIH----EV 523 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds-------Av~~~M~----~V 523 (658)
..+++|.|.+.++..++..+.+.| -+|++.+ |.+.+... .+...|+.+..+... -+..+-+ ++
T Consensus 102 ~~v~~t~g~~~al~~~~~~l~~~g--d~Vl~~~--~~~~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 175 (406)
T 1xi9_A 102 DDVRVTAAVTEALQLIFGALLDPG--DEILVPG--PSYPPYTG--LVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRT 175 (406)
T ss_dssp GGEEEESHHHHHHHHHHHHHCCTT--CEEEEEE--SCCHHHHH--HHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTTE
T ss_pred HHEEEcCChHHHHHHHHHHhCCCC--CEEEEcC--CCCccHHH--HHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCcCc
Confidence 467777777777766666553333 3555543 55555433 334568777666421 1222222 23
Q ss_pred cEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 524 TRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 524 d~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
..|++- .--...|.++..-=--.|+-+|++|++.+++
T Consensus 176 ~~v~i~-~p~nptG~~~~~~~l~~i~~~a~~~~~~li~ 212 (406)
T 1xi9_A 176 KAIAVI-NPNNPTGALYDKKTLEEILNIAGEYEIPVIS 212 (406)
T ss_dssp EEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred eEEEEE-CCCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 333331 1111223332222234566678888987765
No 325
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=26.50 E-value=3e+02 Score=27.16 Aligned_cols=107 Identities=15% Similarity=0.094 Sum_probs=53.4
Q ss_pred CEEEeeCChHHHHHHH-HHHHHcCCeeEEEEeCCCCCc-----hHHHHHHHHH---hCCCcEEEEcc----hHHHHHhh-
Q 006152 456 DVLLTYGSSSAVEMIL-QHAHELGKQFRVVIVDSRPKH-----EGKLLLRRLV---RKGLSCTYTHI----NAISYIIH- 521 (658)
Q Consensus 456 dvILT~g~SsaV~~vL-~~A~e~gk~f~ViV~ESRP~~-----EG~~La~eL~---~~GI~vT~I~D----sAv~~~M~- 521 (658)
.+||..|-+.-|..-| +.+.++| .+|++++-.+.. +....+.+|. ..++.+.. .| ..+..++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-~D~~~~~~~~~~~~~ 79 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLEAG--YLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE-MDILDQGALQRLFKK 79 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTT--CCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEE-CCTTCHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC--CEEEEEecCCcccccccccHHHHHHHHhccCCceEEEE-CCCCCHHHHHHHHHh
Confidence 4677777655444333 4444555 456666422211 0112223333 23443322 23 34555666
Q ss_pred -hccEEEEcceeEecC--------CCeecccchHHHHHHHhhCCCCeEeeccc
Q 006152 522 -EVTRVFLGASSVLSN--------GTVCSRVGTACVAMVAYGFHIPVLVCCEA 565 (658)
Q Consensus 522 -~Vd~VlvGAdaV~aN--------G~VvNKiGT~~lAl~Ak~~~VPVyV~aet 565 (658)
.+|.||--|-..... ---.|-.||..+.-+|+.+++.-+|.+.+
T Consensus 80 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 132 (348)
T 1ek6_A 80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSS 132 (348)
T ss_dssp CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 455555433211000 00135678999998999889876665544
No 326
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=26.24 E-value=5.1e+02 Score=28.65 Aligned_cols=108 Identities=16% Similarity=0.166 Sum_probs=67.4
Q ss_pred HHHHHHHhccCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCC---------C-----chH----HHHHHHHHhC-
Q 006152 444 IVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRP---------K-----HEG----KLLLRRLVRK- 504 (658)
Q Consensus 444 Ia~~a~~~I~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP---------~-----~EG----~~La~eL~~~- 504 (658)
++..+.+.+. +..||..|.+.+=..++..+...|.. ++.++|... . .-| ..++..|.+.
T Consensus 22 ~G~~~q~~L~-~~~VlvvG~GGlGseiak~La~aGVg-~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~lN 99 (531)
T 1tt5_A 22 WGDHGQEALE-SAHVCLINATATGTEILKNLVLPGIG-SFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELN 99 (531)
T ss_dssp HHHHHHHHHH-HCEEEEECCSHHHHHHHHHHHTTTCS-EEEEECCCBBCHHHHHHCTTCCGGGBTSBHHHHHHHHHHTTC
T ss_pred cCHHHHHHHh-cCeEEEECcCHHHHHHHHHHHHcCCC-eEEEEeCCEechhhcccCccCChhhcCcHHHHHHHHHHHHhC
Confidence 6777777776 47788888876644566676667754 444444322 1 112 2233667665
Q ss_pred -CCcEEEEcchHHH------HHhhhccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEee
Q 006152 505 -GLSCTYTHINAIS------YIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVC 562 (658)
Q Consensus 505 -GI~vT~I~DsAv~------~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~ 562 (658)
++.++.+...--. .++...|.||.+.|.+- --+.+.-.|+.+++|++.+
T Consensus 100 p~v~v~~~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~---------~r~~ln~~c~~~~iplI~~ 155 (531)
T 1tt5_A 100 SDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPES---------TSLRLADVLWNSQIPLLIC 155 (531)
T ss_dssp TTSBCCEESSCHHHHHHSCGGGGGGCSEEEEESCCHH---------HHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeCCCcchhhhhhHHHhcCCCEEEEeCCCHH---------HHHHHHHHHHHcCCCEEEE
Confidence 4777777653222 34567899988765432 3356667889999999876
No 327
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=26.22 E-value=3.6e+02 Score=26.47 Aligned_cols=66 Identities=11% Similarity=0.079 Sum_probs=40.7
Q ss_pred eeEE-EEeCCCCCchHHHHHHHHHhCCC-cEEEEcc-hHHHHHhhhccEEEEcceeEecCCCeecccchHHHHHHHhhCC
Q 006152 480 QFRV-VIVDSRPKHEGKLLLRRLVRKGL-SCTYTHI-NAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFH 556 (658)
Q Consensus 480 ~f~V-iV~ESRP~~EG~~La~eL~~~GI-~vT~I~D-sAv~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~ 556 (658)
.+++ +++-..+. .++-..+.+.|+ .+++.-- .-+..+|..+|.+|+-+ | ....+=|-.+|
T Consensus 212 ~~~~l~i~G~~~~---~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~~s------g--------~~~~~EAma~G 274 (364)
T 1f0k_A 212 SVTIWHQSGKGSQ---QSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRS------G--------ALTVSEIAAAG 274 (364)
T ss_dssp GEEEEEECCTTCH---HHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSEEEECC------C--------HHHHHHHHHHT
T ss_pred CcEEEEEcCCchH---HHHHHHHhhcCCCceEEecchhhHHHHHHhCCEEEECC------c--------hHHHHHHHHhC
Confidence 5674 44444442 344444555665 4555532 46788899999998753 2 33445566779
Q ss_pred CCeEee
Q 006152 557 IPVLVC 562 (658)
Q Consensus 557 VPVyV~ 562 (658)
+||++.
T Consensus 275 ~Pvi~~ 280 (364)
T 1f0k_A 275 LPALFV 280 (364)
T ss_dssp CCEEEC
T ss_pred CCEEEe
Confidence 999986
No 328
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=26.20 E-value=1e+02 Score=29.79 Aligned_cols=25 Identities=16% Similarity=0.278 Sum_probs=18.6
Q ss_pred ecccchHHHHHHHhhCCCCeEeecc
Q 006152 540 CSRVGTACVAMVAYGFHIPVLVCCE 564 (658)
Q Consensus 540 vNKiGT~~lAl~Ak~~~VPVyV~ae 564 (658)
+|-.||..+.-+|+.+++.|+.+..
T Consensus 89 ~nv~~~~~l~~a~~~~~~~iv~~SS 113 (292)
T 1vl0_A 89 INAIGPKNLAAAAYSVGAEIVQIST 113 (292)
T ss_dssp HHTHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCeEEEech
Confidence 4668899999889888885555444
No 329
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=26.18 E-value=1.6e+02 Score=28.72 Aligned_cols=100 Identities=13% Similarity=0.088 Sum_probs=47.7
Q ss_pred CCEEEeeCChHHHHHHHH-HHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHhhh--ccEEEEcce
Q 006152 455 GDVLLTYGSSSAVEMILQ-HAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHE--VTRVFLGAS 531 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~-~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M~~--Vd~VlvGAd 531 (658)
+.+||..|.+.-|..-|. .+.++| .+|+++.-++...+ -+.+-+.....+..++.. +|.||--|-
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~----------~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 69 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNN--WHAVGCGFRRARPK----------FEQVNLLDSNAVHHIIHDFQPHVIVHCAA 69 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTT--CEEEEEC----------------------------CHHHHHHHCCSEEEECC-
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCC--CeEEEEccCCCCCC----------eEEecCCCHHHHHHHHHhhCCCEEEECCc
Confidence 356788887665544443 444445 67777753222111 112222222344555654 788876553
Q ss_pred eEecC--------CCeecccchHHHHHHHhhCCCCeEeecccc
Q 006152 532 SVLSN--------GTVCSRVGTACVAMVAYGFHIPVLVCCEAY 566 (658)
Q Consensus 532 aV~aN--------G~VvNKiGT~~lAl~Ak~~~VPVyV~aety 566 (658)
....+ ---+|-.||..+.-+|+.+++.|+.+....
T Consensus 70 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~ 112 (315)
T 2ydy_A 70 ERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDY 112 (315)
T ss_dssp ------------------CHHHHHHHHHHHHHTCEEEEEEEGG
T ss_pred ccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHH
Confidence 22111 112478899999999998888766555443
No 330
>3fwk_A FMN adenylyltransferase; FAD biosynthesis, alpha/beta protein, rossmann- like fold, APO-form, extended loop region; HET: BGC; 1.20A {Candida glabrata} PDB: 3g59_A* 3g5a_A* 3g6k_A*
Probab=25.95 E-value=5.7e+02 Score=26.50 Aligned_cols=90 Identities=12% Similarity=0.205 Sum_probs=52.4
Q ss_pred HHHHHHHhccC--CCEEEeeCCh---HHHHHHHHHHHHc-------------------CCeeEEEEeCCC-CCchHHHHH
Q 006152 444 IVKHAVTKIRD--GDVLLTYGSS---SAVEMILQHAHEL-------------------GKQFRVVIVDSR-PKHEGKLLL 498 (658)
Q Consensus 444 Ia~~a~~~I~d--gdvILT~g~S---saV~~vL~~A~e~-------------------gk~f~ViV~ESR-P~~EG~~La 498 (658)
|.+.+++.... +..+|.|+.+ +++..++.++... ...|.|+-+||. ..-|=.++.
T Consensus 46 iLrea~~~f~~~~~~ialSfSGGKDStVLLhL~~kal~~~~~~~~~~~~~~~~~~~~p~~~ipvifiDTG~~FpET~ef~ 125 (308)
T 3fwk_A 46 LINETFPKWSPLNGEISFSYNGGKDCQVLLLLYLSCLWEYYIVKLSQSQFDGKFHRFPLTKLPTVFIDHDDTFKTLENFI 125 (308)
T ss_dssp HHHHTTTTSCSSSSSEEEECCSSHHHHHHHHHHHHHHHHHHTCCE-----------------EEEECCCTTCCHHHHHHH
T ss_pred HHHHHHHHcccccCCEEEEecCChhHHHHHHHHHHHhhhhcccccccccccccccccCCCCccEEEEeCCCCCHHHHHHH
Confidence 55566666654 6778887654 4555655555311 147889888875 455677777
Q ss_pred HHHH-hCCCcEEEEcc-------hHHHHHhh---hccEEEEcceeE
Q 006152 499 RRLV-RKGLSCTYTHI-------NAISYIIH---EVTRVFLGASSV 533 (658)
Q Consensus 499 ~eL~-~~GI~vT~I~D-------sAv~~~M~---~Vd~VlvGAdaV 533 (658)
.++. +.|+++..+.- .+...+++ .++.+|.|.-+-
T Consensus 126 d~~~~~ygL~L~v~~p~~~~~~~~~cc~~~K~~P~~~AwitG~RR~ 171 (308)
T 3fwk_A 126 EETSLRYSLSLYESDRDKCETMAEAFETFLQVFPETKAIVIGIRHT 171 (308)
T ss_dssp HHHHHHTTEEEEECCTTSCCCHHHHHHHHHHHCTTCCEEECCCCTT
T ss_pred HHHHHHhCCcEEEeCCCCCHHHHHHHHHHHHhCCCCCEEEEEeecC
Confidence 6664 46887766532 13334443 367777777654
No 331
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=25.94 E-value=1.4e+02 Score=31.60 Aligned_cols=95 Identities=9% Similarity=0.016 Sum_probs=51.3
Q ss_pred eCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHH-HH-------HHHHhCCCcEEEEcc--------hHHHHHhh-hc
Q 006152 461 YGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKL-LL-------RRLVRKGLSCTYTHI--------NAISYIIH-EV 523 (658)
Q Consensus 461 ~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~-La-------~eL~~~GI~vT~I~D--------sAv~~~M~-~V 523 (658)
.+.+.++..+|....+.| -+|++.+ .|.+.+.. +. ..|...|+.+..+.. ..+-..+. +.
T Consensus 84 ~sGt~Ai~~al~all~~G--D~Vl~~~-~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~~t 160 (409)
T 3jzl_A 84 ISGTHAISTVLFGILRPD--DELLYIT-GQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMTPKT 160 (409)
T ss_dssp CSHHHHHHHHHHHHCCTT--CEEEECS-SSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHHHCCTTE
T ss_pred ccHHHHHHHHHHHhcCCC--CEEEEeC-CCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCCCCCcCHHHHHHhccCCC
Confidence 343445555555443333 4566655 34444433 33 346678998888753 22333333 33
Q ss_pred cEEEEcceeEecCCCeecccchH----HHHHHHhh--CCCCeEee
Q 006152 524 TRVFLGASSVLSNGTVCSRVGTA----CVAMVAYG--FHIPVLVC 562 (658)
Q Consensus 524 d~VlvGAdaV~aNG~VvNKiGT~----~lAl~Ak~--~~VPVyV~ 562 (658)
.+|++.. +-|...|..|+. .|+-+||+ |+++|+|=
T Consensus 161 klV~i~~----s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD 201 (409)
T 3jzl_A 161 KMIGIQR----SRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVD 201 (409)
T ss_dssp EEEEEEC----SCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred eEEEEEC----CCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEe
Confidence 3443311 234466777764 46667888 99988863
No 332
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=25.87 E-value=1.3e+02 Score=30.18 Aligned_cols=53 Identities=19% Similarity=0.301 Sum_probs=31.8
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEc
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTH 512 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~ 512 (658)
..+++|.|.+.++..+++.+.+.|+ -+|++. .|.+.+...+ +...|..+..+.
T Consensus 76 ~~v~~~~G~~~ai~~~~~~~~~~g~-d~Vl~~--~p~~~~~~~~--~~~~g~~~~~v~ 128 (356)
T 1fg7_A 76 EQVLVSRGADEGIELLIRAFCEPGK-DAILYC--PPTYGMYSVS--AETIGVECRTVP 128 (356)
T ss_dssp GGEEEESHHHHHHHHHHHHHCCTTT-CEEEEC--SSSCTHHHHH--HHHHTCEEEECC
T ss_pred HHEEEcCCHHHHHHHHHHHHhCCCC-CEEEEe--CCChHHHHHH--HHHcCCEEEEee
Confidence 4677887777777665655433341 356654 4777775544 334577777664
No 333
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=25.84 E-value=96 Score=30.76 Aligned_cols=77 Identities=16% Similarity=0.140 Sum_probs=52.9
Q ss_pred HHHhccCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHH-HHHHhCCC--cEEEEcchHHHHHhh--h
Q 006152 448 AVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLL-RRLVRKGL--SCTYTHINAISYIIH--E 522 (658)
Q Consensus 448 a~~~I~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La-~eL~~~GI--~vT~I~DsAv~~~M~--~ 522 (658)
..+++..|++||=.|+++....+. +.+.|..-+|+.+|-.|.. .+.| +.+...|+ .++++.-+....+-. +
T Consensus 15 i~~~v~~g~~VlDIGtGsG~l~i~--la~~~~~~~V~AvDi~~~a--l~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~ 90 (230)
T 3lec_A 15 VANYVPKGARLLDVGSDHAYLPIF--LLQMGYCDFAIAGEVVNGP--YQSALKNVSEHGLTSKIDVRLANGLSAFEEADN 90 (230)
T ss_dssp HHTTSCTTEEEEEETCSTTHHHHH--HHHTTCEEEEEEEESSHHH--HHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGC
T ss_pred HHHhCCCCCEEEEECCchHHHHHH--HHHhCCCCEEEEEECCHHH--HHHHHHHHHHcCCCCcEEEEECchhhccccccc
Confidence 456889999999999998764432 3345777799999976542 3345 56777887 378877665554444 4
Q ss_pred ccEEEE
Q 006152 523 VTRVFL 528 (658)
Q Consensus 523 Vd~Vlv 528 (658)
+|.|++
T Consensus 91 ~D~Ivi 96 (230)
T 3lec_A 91 IDTITI 96 (230)
T ss_dssp CCEEEE
T ss_pred cCEEEE
Confidence 888775
No 334
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=25.74 E-value=1.1e+02 Score=29.66 Aligned_cols=99 Identities=12% Similarity=0.083 Sum_probs=56.9
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEE-cc----hHHHHHhhhccEEEEc
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYT-HI----NAISYIIHEVTRVFLG 529 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I-~D----sAv~~~M~~Vd~VlvG 529 (658)
+.+||..|-+.-|...|..... .+..+|++++-.+.... +-.++++ .| ..+..++.++|.||--
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~-~~G~~V~~~~r~~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 71 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLA-PMAEILRLADLSPLDPA----------GPNEECVQCDLADANAVNAMVAGCDGIVHL 71 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTG-GGEEEEEEEESSCCCCC----------CTTEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHH-hcCCEEEEEecCCcccc----------CCCCEEEEcCCCCHHHHHHHHcCCCEEEEC
Confidence 3467777776666554444332 23467777765443211 2233333 22 4556667777777654
Q ss_pred ceeEecCCC-----eecccchHHHHHHHhhCCCCeEeeccc
Q 006152 530 ASSVLSNGT-----VCSRVGTACVAMVAYGFHIPVLVCCEA 565 (658)
Q Consensus 530 AdaV~aNG~-----VvNKiGT~~lAl~Ak~~~VPVyV~aet 565 (658)
|-. ..... -+|-.||+.+.-+|+.+++.-+|..-+
T Consensus 72 Ag~-~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS 111 (267)
T 3rft_A 72 GGI-SVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASS 111 (267)
T ss_dssp CSC-CSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCC-cCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 422 11111 258899999999999999866665443
No 335
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=25.68 E-value=1.7e+02 Score=25.05 Aligned_cols=80 Identities=11% Similarity=0.050 Sum_probs=45.9
Q ss_pred CeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHH-hh--hccEEEEcceeEecCCCeecccchHHHHHHHhh-
Q 006152 479 KQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYI-IH--EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYG- 554 (658)
Q Consensus 479 k~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~-M~--~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~- 554 (658)
...+|+|+|..+.. ...+...|...|+.|....+..-+.- +. ..|.||+..+- .+ .-|.-.+..+-+.
T Consensus 2 ~~~~ILivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dliild~~l--~~-----~~g~~~~~~l~~~~ 73 (155)
T 1qkk_A 2 AAPSVFLIDDDRDL-RKAMQQTLELAGFTVSSFASATEALAGLSADFAGIVISDIRM--PG-----MDGLALFRKILALD 73 (155)
T ss_dssp --CEEEEECSCHHH-HHHHHHHHHHTTCEEEEESCHHHHHHTCCTTCCSEEEEESCC--SS-----SCHHHHHHHHHHHC
T ss_pred CCCEEEEEeCCHHH-HHHHHHHHHHcCcEEEEECCHHHHHHHHHhCCCCEEEEeCCC--CC-----CCHHHHHHHHHhhC
Confidence 35678888876543 23445777788988876554332222 22 57888887542 11 2243334444333
Q ss_pred CCCCeEeecccc
Q 006152 555 FHIPVLVCCEAY 566 (658)
Q Consensus 555 ~~VPVyV~aety 566 (658)
.++|+++++...
T Consensus 74 ~~~pii~ls~~~ 85 (155)
T 1qkk_A 74 PDLPMILVTGHG 85 (155)
T ss_dssp TTSCEEEEECGG
T ss_pred CCCCEEEEECCC
Confidence 479999987654
No 336
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=25.59 E-value=4.7e+02 Score=25.44 Aligned_cols=98 Identities=15% Similarity=0.189 Sum_probs=52.4
Q ss_pred CEEEeeCChHHHHHHHHHHH----HcCCeeEEEEeCCCCCchHHHHH-HHHHhCCCcEEEEcch--------HHHHHhhh
Q 006152 456 DVLLTYGSSSAVEMILQHAH----ELGKQFRVVIVDSRPKHEGKLLL-RRLVRKGLSCTYTHIN--------AISYIIHE 522 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~----e~gk~f~ViV~ESRP~~EG~~La-~eL~~~GI~vT~I~Ds--------Av~~~M~~ 522 (658)
.+++|.|.+.++..++..+. +.| -+|++.+ |.+.+...+ ..+...|+.+.++... .+-..+.+
T Consensus 62 ~i~~~~g~~~a~~~~~~~~~~~~~~~g--d~vi~~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 137 (382)
T 4hvk_A 62 TVVFTSGATEANNLAIIGYAMRNARKG--KHILVSA--VEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRD 137 (382)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHGGGC--CEEEEET--TCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCT
T ss_pred eEEEECCchHHHHHHHHHhhhhhcCCC--CEEEECC--CCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhcc
Confidence 46777776667766555443 334 3566643 444444333 4556789999888632 22222322
Q ss_pred ccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 523 VTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 523 Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
=.++++=..--...|.+.. --.|+-+|++|++ |++
T Consensus 138 ~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~-li~ 172 (382)
T 4hvk_A 138 DTILVSVQHANNEIGTIQP---VEEISEVLAGKAA-LHI 172 (382)
T ss_dssp TEEEEECCSBCTTTCBBCC---HHHHHHHHSSSSE-EEE
T ss_pred CceEEEEECCCCCceeeCC---HHHHHHHHHHcCE-EEE
Confidence 1233332222222344433 2367778999998 555
No 337
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=25.58 E-value=2e+02 Score=24.57 Aligned_cols=80 Identities=19% Similarity=0.113 Sum_probs=46.0
Q ss_pred CeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchH--HHHHhh-hccEEEEcceeEecCCCeecccchHHHHHHHhh-
Q 006152 479 KQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINA--ISYIIH-EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYG- 554 (658)
Q Consensus 479 k~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsA--v~~~M~-~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~- 554 (658)
+..+|+|+|..+.. ...+...|...|+.|....+.. +..+-. ..|.||+..+- .+ .-|--.+..+.+.
T Consensus 6 ~~~~iLivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l--~~-----~~g~~~~~~l~~~~ 77 (154)
T 2rjn_A 6 KNYTVMLVDDEQPI-LNSLKRLIKRLGCNIITFTSPLDALEALKGTSVQLVISDMRM--PE-----MGGEVFLEQVAKSY 77 (154)
T ss_dssp SCCEEEEECSCHHH-HHHHHHHHHTTTCEEEEESCHHHHHHHHTTSCCSEEEEESSC--SS-----SCHHHHHHHHHHHC
T ss_pred CCCeEEEEcCCHHH-HHHHHHHHHHcCCeEEEeCCHHHHHHHHhcCCCCEEEEecCC--CC-----CCHHHHHHHHHHhC
Confidence 45678888876543 2334566777888877555432 222222 57888887542 22 1233334444443
Q ss_pred CCCCeEeecccc
Q 006152 555 FHIPVLVCCEAY 566 (658)
Q Consensus 555 ~~VPVyV~aety 566 (658)
.++|+++++...
T Consensus 78 ~~~~ii~ls~~~ 89 (154)
T 2rjn_A 78 PDIERVVISGYA 89 (154)
T ss_dssp TTSEEEEEECGG
T ss_pred CCCcEEEEecCC
Confidence 479999987654
No 338
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=25.49 E-value=1.6e+02 Score=29.54 Aligned_cols=20 Identities=10% Similarity=0.033 Sum_probs=15.3
Q ss_pred HHHHHHHhhCCCCeEeeccc
Q 006152 546 ACVAMVAYGFHIPVLVCCEA 565 (658)
Q Consensus 546 ~~lAl~Ak~~~VPVyV~aet 565 (658)
+..+++|+..+||++...-.
T Consensus 125 ~~~~~aa~~~giP~v~~~~~ 144 (391)
T 3tsa_A 125 LIGRVLGGLLDLPVVLHRWG 144 (391)
T ss_dssp HHHHHHHHHTTCCEEEECCS
T ss_pred hHHHHHHHHhCCCEEEEecC
Confidence 44567899999999887543
No 339
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=25.32 E-value=1.6e+02 Score=24.69 Aligned_cols=78 Identities=12% Similarity=0.118 Sum_probs=42.8
Q ss_pred eeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHH-HHhh--hccEEEEcceeEecCCCeecccchHHHHHHHhh-C
Q 006152 480 QFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAIS-YIIH--EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYG-F 555 (658)
Q Consensus 480 ~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~-~~M~--~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~-~ 555 (658)
..+|+++|..+.. ...+...|.+.|+.|....+..-+ ..+. ..|.||+.. +.+ .-|.-.+..+-+. .
T Consensus 4 ~~~iLivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~---~~~-----~~g~~~~~~l~~~~~ 74 (142)
T 2qxy_A 4 TPTVMVVDESRIT-FLAVKNALEKDGFNVIWAKNEQEAFTFLRREKIDLVFVDV---FEG-----EESLNLIRRIREEFP 74 (142)
T ss_dssp CCEEEEECSCHHH-HHHHHHHHGGGTCEEEEESSHHHHHHHHTTSCCSEEEEEC---TTT-----HHHHHHHHHHHHHCT
T ss_pred CCeEEEEeCCHHH-HHHHHHHHHhCCCEEEEECCHHHHHHHHhccCCCEEEEeC---CCC-----CcHHHHHHHHHHHCC
Confidence 4567777765433 223446677778877755543222 2222 578888864 222 1233333333333 4
Q ss_pred CCCeEeecccc
Q 006152 556 HIPVLVCCEAY 566 (658)
Q Consensus 556 ~VPVyV~aety 566 (658)
++|+++++...
T Consensus 75 ~~pii~ls~~~ 85 (142)
T 2qxy_A 75 DTKVAVLSAYV 85 (142)
T ss_dssp TCEEEEEESCC
T ss_pred CCCEEEEECCC
Confidence 69999987754
No 340
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=25.09 E-value=1.8e+02 Score=25.15 Aligned_cols=81 Identities=19% Similarity=0.197 Sum_probs=46.9
Q ss_pred CCeeEEEEeCCCCCchHHHHHHHHHhCCCcEE-EEcch--HHHHHhh---hccEEEEcceeEecCCCeecccchHHHHHH
Q 006152 478 GKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCT-YTHIN--AISYIIH---EVTRVFLGASSVLSNGTVCSRVGTACVAMV 551 (658)
Q Consensus 478 gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT-~I~Ds--Av~~~M~---~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~ 551 (658)
+..++|+|+|..+.. ...+...|.+.|+.+. ...+. ++..+-. ..|.||+..+- .+ .-|--.+..+
T Consensus 34 ~~~~~Ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~~al~~l~~~~~~~dliilD~~l--~~-----~~g~~~~~~l 105 (157)
T 3hzh_A 34 GIPFNVLIVDDSVFT-VKQLTQIFTSEGFNIIDTAADGEEAVIKYKNHYPNIDIVTLXITM--PK-----MDGITCLSNI 105 (157)
T ss_dssp TEECEEEEECSCHHH-HHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGCCEEEECSSC--SS-----SCHHHHHHHH
T ss_pred CCceEEEEEeCCHHH-HHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCCCCCEEEEeccC--CC-----ccHHHHHHHH
Confidence 456789999887643 2344577788898876 33332 2222222 56888887642 22 2233333333
Q ss_pred Hh-hCCCCeEeecccc
Q 006152 552 AY-GFHIPVLVCCEAY 566 (658)
Q Consensus 552 Ak-~~~VPVyV~aety 566 (658)
-+ ..++|+++++...
T Consensus 106 r~~~~~~~ii~ls~~~ 121 (157)
T 3hzh_A 106 MEFDKNARVIMISALG 121 (157)
T ss_dssp HHHCTTCCEEEEESCC
T ss_pred HhhCCCCcEEEEeccC
Confidence 33 3579999987643
No 341
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=25.05 E-value=2e+02 Score=30.07 Aligned_cols=102 Identities=10% Similarity=0.145 Sum_probs=54.3
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcC-CeeEEEEeCCCCCchHHHHH--HHHHhCCCcE-----EEEcc--------hHHH
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELG-KQFRVVIVDSRPKHEGKLLL--RRLVRKGLSC-----TYTHI--------NAIS 517 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~g-k~f~ViV~ESRP~~EG~~La--~eL~~~GI~v-----T~I~D--------sAv~ 517 (658)
.+.+++|-|.+..+..++..+.+.+ ++.+|++.+ |.+-+.... ..+...|+.+ .+++. ..+-
T Consensus 128 ~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~--~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~ 205 (465)
T 3e9k_A 128 EKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEA--KAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDIL 205 (465)
T ss_dssp GGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEET--TCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHH
T ss_pred cCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcC--CcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHH
Confidence 3567888777777765555543333 334555543 555554442 3455678764 23321 2344
Q ss_pred HHhh----hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 518 YIIH----EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 518 ~~M~----~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
..+. ++.+| +-..-=...|.+.. + -.|+-+|++||+.|++
T Consensus 206 ~~i~~~~~~~~lv-~~~~~~n~tG~~~~-l--~~i~~la~~~g~~vi~ 249 (465)
T 3e9k_A 206 EVIEKEGDSIAVI-LFSGVHFYTGQHFN-I--PAITKAGQAKGCYVGF 249 (465)
T ss_dssp HHHHHHGGGEEEE-EEESBCTTTCBBCC-H--HHHHHHHHHTTCEEEE
T ss_pred HHHHhcCCCeEEE-EEeCcccCcceeec-H--HHHHHHHHHcCCEEEE
Confidence 4443 33333 33322223454433 2 5677789999998875
No 342
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=24.98 E-value=5.5e+02 Score=25.97 Aligned_cols=20 Identities=15% Similarity=0.517 Sum_probs=14.1
Q ss_pred CCEEEeeCChHHHHHHHHHH
Q 006152 455 GDVLLTYGSSSAVEMILQHA 474 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A 474 (658)
..+++|.|.+.++..++..+
T Consensus 79 ~~v~~~~g~t~a~~~~~~~~ 98 (432)
T 3a9z_A 79 QDIIFTSGGTESNNLVIHST 98 (432)
T ss_dssp GGEEEESCHHHHHHHHHHHH
T ss_pred CeEEEeCChHHHHHHHHHHH
Confidence 46788888777776666554
No 343
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=24.83 E-value=3.7e+02 Score=25.04 Aligned_cols=75 Identities=12% Similarity=0.185 Sum_probs=46.7
Q ss_pred CCCEEEeeCChHHHHHHH-HHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEE-cc----hHHHHHhh------
Q 006152 454 DGDVLLTYGSSSAVEMIL-QHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYT-HI----NAISYIIH------ 521 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL-~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I-~D----sAv~~~M~------ 521 (658)
.|.+||..|-+.-+...| +.+.++| .+|+++..|.......+..+|.+.|..+.++ .| ..+..++.
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~G--~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNMG--ANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF 81 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTT--CEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCC--CEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 356788888776654444 3444455 5788886665545556667787778777665 33 23444444
Q ss_pred -hccEEEEcc
Q 006152 522 -EVTRVFLGA 530 (658)
Q Consensus 522 -~Vd~VlvGA 530 (658)
.+|.||--|
T Consensus 82 ~~~d~vi~~A 91 (247)
T 2hq1_A 82 GRIDILVNNA 91 (247)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 578887765
No 344
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=24.76 E-value=2.4e+02 Score=28.60 Aligned_cols=89 Identities=13% Similarity=0.100 Sum_probs=51.1
Q ss_pred CEEEeeCChHH-HHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHh-hhccEEEEcceeE
Q 006152 456 DVLLTYGSSSA-VEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYII-HEVTRVFLGASSV 533 (658)
Q Consensus 456 dvILT~g~Ssa-V~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M-~~Vd~VlvGAdaV 533 (658)
..|+.+|-+-+ +..+-+.++++ .++|.+.|.++..+ +..+|.+.||++.+-.+.. .+. ..+|.||+..- |
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~--G~~V~~~D~~~~~~---~~~~L~~~gi~v~~g~~~~--~l~~~~~d~vV~Spg-i 76 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEA--GFEVSGCDAKMYPP---MSTQLEALGIDVYEGFDAA--QLDEFKADVYVIGNV-A 76 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHT--TCEEEEEESSCCTT---HHHHHHHTTCEEEESCCGG--GGGSCCCSEEEECTT-C
T ss_pred cEEEEEEECHHHHHHHHHHHHhC--CCEEEEEcCCCCcH---HHHHHHhCCCEEECCCCHH--HcCCCCCCEEEECCC-c
Confidence 45667765422 21122333443 46888899887643 4567888999887543321 233 35788876531 1
Q ss_pred ecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 534 LSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 534 ~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
-. ....-..|++.|+||+=
T Consensus 77 ~~---------~~p~~~~a~~~gi~v~~ 95 (326)
T 3eag_A 77 KR---------GMDVVEAILNLGLPYIS 95 (326)
T ss_dssp CT---------TCHHHHHHHHTTCCEEE
T ss_pred CC---------CCHHHHHHHHcCCcEEe
Confidence 11 22344567788888774
No 345
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=24.76 E-value=1.4e+02 Score=32.13 Aligned_cols=95 Identities=12% Similarity=-0.033 Sum_probs=54.0
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEcceeE
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASSV 533 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~VlvGAdaV 533 (658)
.|..||..|.+.+-...++.+.+.|..+. |++..... . ..+|.+.| .++++...--...+..+|.||..
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~--vi~~~~~~---~-~~~l~~~~-~i~~~~~~~~~~~l~~~~lVi~a---- 79 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLT--VNALTFIP---Q-FTVWANEG-MLTLVEGPFDETLLDSCWLAIAA---- 79 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEE--EEESSCCH---H-HHHHHTTT-SCEEEESSCCGGGGTTCSEEEEC----
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEE--EEcCCCCH---H-HHHHHhcC-CEEEEECCCCccccCCccEEEEc----
Confidence 46789999999876676777777776544 44433222 1 23444322 23444322111123345555442
Q ss_pred ecCCCe-ecccchHHHHHHHhhCCCCeEeeccc
Q 006152 534 LSNGTV-CSRVGTACVAMVAYGFHIPVLVCCEA 565 (658)
Q Consensus 534 ~aNG~V-vNKiGT~~lAl~Ak~~~VPVyV~aet 565 (658)
-|+- + ...++..|+.++|||-|+.+.
T Consensus 80 --t~~~~~----n~~i~~~a~~~~i~vn~~d~~ 106 (457)
T 1pjq_A 80 --TDDDTV----NQRVSDAAESRRIFCNVVDAP 106 (457)
T ss_dssp --CSCHHH----HHHHHHHHHHTTCEEEETTCT
T ss_pred --CCCHHH----HHHHHHHHHHcCCEEEECCCc
Confidence 2222 2 346888999999998777654
No 346
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=24.75 E-value=1.3e+02 Score=29.86 Aligned_cols=94 Identities=14% Similarity=0.202 Sum_probs=49.8
Q ss_pred CEEEeeCChHHHHHHHHHH---HHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch--------HHHHHhhhcc
Q 006152 456 DVLLTYGSSSAVEMILQHA---HELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN--------AISYIIHEVT 524 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A---~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds--------Av~~~M~~Vd 524 (658)
.+++|.|.+.++..++..+ .+.| -+|++. .|.+.+...+ +...|+.+.++... .+-..+.+-.
T Consensus 49 ~v~~~~ggt~al~~~~~~~~~~~~~g--d~Vl~~--~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~ 122 (375)
T 2fnu_A 49 HALVFNSATSALLTLYRNFSEFSADR--NEIITT--PISFVATANM--LLESGYTPVFAGIKNDGNIDELALEKLINERT 122 (375)
T ss_dssp EEEEESCHHHHHHHHHHHSSCCCTTS--CEEEEC--SSSCTHHHHH--HHHTTCEEEECCBCTTSSBCGGGSGGGCCTTE
T ss_pred eEEEeCCHHHHHHHHHHHhcccCCCC--CEEEEC--CCccHhHHHH--HHHCCCEEEEeccCCCCCCCHHHHHhhcCcCc
Confidence 5677777677776666554 2223 356654 3566665443 33478888776532 1111111112
Q ss_pred EEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 525 RVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 525 ~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
++|+-.+. .|.+.. --.|+-+|++|++++++
T Consensus 123 ~~v~~~~~---tG~~~~---l~~i~~l~~~~~~~li~ 153 (375)
T 2fnu_A 123 KAIVSVDY---AGKSVE---VESVQKLCKKHSLSFLS 153 (375)
T ss_dssp EEEEEECG---GGCCCC---HHHHHHHHHHHTCEEEE
T ss_pred eEEEEeCC---cCCccC---HHHHHHHHHHcCCEEEE
Confidence 33222222 444433 25677788899988776
No 347
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=24.64 E-value=2.6e+02 Score=29.31 Aligned_cols=104 Identities=16% Similarity=0.065 Sum_probs=52.6
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHH-HHHHhC------CC-----cEEEEcch---------
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLL-RRLVRK------GL-----SCTYTHIN--------- 514 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La-~eL~~~------GI-----~vT~I~Ds--------- 514 (658)
.+++|-|-+.+++..|+.|.....+-+|++.+ |.+.|..+. ..+... +. .+..++..
T Consensus 127 ~v~~~~sGseA~~~alk~a~~~~g~~~ii~~~--~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 204 (453)
T 4ffc_A 127 RTALFNSGAEAVENAIKVARLATGRPAVVAFD--NAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGL 204 (453)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHCCCEEEEET--TCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTC
T ss_pred EEEEeCcHHHHHHHHHHHHHHhcCCCEEEEEc--CccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCcccc
Confidence 57778777888888887765422233455543 344444332 222111 11 34444321
Q ss_pred ----HHH-------HHhhhccEEEEcceeEecCCCeec-ccchH-HHHHHHhhCCCCeEe
Q 006152 515 ----AIS-------YIIHEVTRVFLGASSVLSNGTVCS-RVGTA-CVAMVAYGFHIPVLV 561 (658)
Q Consensus 515 ----Av~-------~~M~~Vd~VlvGAdaV~aNG~VvN-KiGT~-~lAl~Ak~~~VPVyV 561 (658)
... ..+..-+..++=.+-+..+|+++- .-+-+ .|+-+|++|++.+++
T Consensus 205 ~~~~~~~~~~~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~ 264 (453)
T 4ffc_A 205 TGEEAARRAISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIA 264 (453)
T ss_dssp CHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEE
T ss_pred chHHHHHHHHHHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 111 111111233333455777766554 33333 366789999997765
No 348
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=24.63 E-value=1.6e+02 Score=28.61 Aligned_cols=19 Identities=16% Similarity=-0.085 Sum_probs=13.7
Q ss_pred cccchHHHHHHHhhCCCCe
Q 006152 541 SRVGTACVAMVAYGFHIPV 559 (658)
Q Consensus 541 NKiGT~~lAl~Ak~~~VPV 559 (658)
|--||..++-+++..+++.
T Consensus 82 ~v~~t~~l~~~~~~~~~~~ 100 (298)
T 4b4o_A 82 RLETTQLLAKAITKAPQPP 100 (298)
T ss_dssp HHHHHHHHHHHHHHCSSCC
T ss_pred HHHHHHHHHHHHHHhCCCc
Confidence 4568888888888776553
No 349
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=24.59 E-value=4.3e+02 Score=27.16 Aligned_cols=75 Identities=17% Similarity=0.209 Sum_probs=43.9
Q ss_pred hccCCCEEEeeCChHH-HHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHH-HHhCCC-cEEEEcchHHHHHhhhccEEE
Q 006152 451 KIRDGDVLLTYGSSSA-VEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRR-LVRKGL-SCTYTHINAISYIIHEVTRVF 527 (658)
Q Consensus 451 ~I~dgdvILT~g~Ssa-V~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~e-L~~~GI-~vT~I~DsAv~~~M~~Vd~Vl 527 (658)
.|..|++||-.|+++. +.. +..|+. ...+|+.+|-.|.. .+.+++ +.+.|+ .++++.-.+..+-=...|.|+
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta-~~lA~~--~ga~V~gIDis~~~--l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FDvV~ 193 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTG-ILLSHV--YGMRVNVVEIEPDI--AELSRKVIEGLGVDGVNVITGDETVIDGLEFDVLM 193 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHH-HHHHHT--TCCEEEEEESSHHH--HHHHHHHHHHHTCCSEEEEESCGGGGGGCCCSEEE
T ss_pred CCCCcCEEEEECCCccHHHH-HHHHHc--cCCEEEEEECCHHH--HHHHHHHHHhcCCCCeEEEECchhhCCCCCcCEEE
Confidence 4678999999999852 211 222332 24589999976543 345543 445576 577876554432112467776
Q ss_pred Ecc
Q 006152 528 LGA 530 (658)
Q Consensus 528 vGA 530 (658)
+.+
T Consensus 194 ~~a 196 (298)
T 3fpf_A 194 VAA 196 (298)
T ss_dssp ECT
T ss_pred ECC
Confidence 543
No 350
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=24.57 E-value=55 Score=31.69 Aligned_cols=26 Identities=12% Similarity=0.105 Sum_probs=20.0
Q ss_pred ecccchHHHHHHHhhCCCCeEeeccc
Q 006152 540 CSRVGTACVAMVAYGFHIPVLVCCEA 565 (658)
Q Consensus 540 vNKiGT~~lAl~Ak~~~VPVyV~aet 565 (658)
.|-.||..+.-+|+.+++.|+.+.-.
T Consensus 82 ~n~~~~~~l~~~~~~~~~~~v~~SS~ 107 (287)
T 3sc6_A 82 INAIGARNVAVASQLVGAKLVYISTD 107 (287)
T ss_dssp HHTHHHHHHHHHHHHHTCEEEEEEEG
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEchh
Confidence 46678999999999999886655544
No 351
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=24.31 E-value=56 Score=33.04 Aligned_cols=104 Identities=10% Similarity=0.049 Sum_probs=56.1
Q ss_pred CCEEEeeCChHHHHHHHH-HHHHcCCeeEEEEeCCCCCchHHHHHHHHH-hCCCcEEEEc---c-hHHHHHhhhccEEEE
Q 006152 455 GDVLLTYGSSSAVEMILQ-HAHELGKQFRVVIVDSRPKHEGKLLLRRLV-RKGLSCTYTH---I-NAISYIIHEVTRVFL 528 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~-~A~e~gk~f~ViV~ESRP~~EG~~La~eL~-~~GI~vT~I~---D-sAv~~~M~~Vd~Vlv 528 (658)
+.+||..|-+.-|...|. .+.++ ..++|+++.-++... ..|. ..++.+.... | ..+..++..+|.||-
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~-----~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih 97 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILET-TDWEVFGMDMQTDRL-----GDLVKHERMHFFEGDITINKEWVEYHVKKCDVILP 97 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHH-SSCEEEEEESCCTTT-----GGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhC-CCCEEEEEeCChhhh-----hhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEE
Confidence 467888887655444443 33444 135777776444211 1111 2344333221 2 345567778888886
Q ss_pred cceeEecCCC--------eecccchHHHHHHHhhCCCCeEeecc
Q 006152 529 GASSVLSNGT--------VCSRVGTACVAMVAYGFHIPVLVCCE 564 (658)
Q Consensus 529 GAdaV~aNG~--------VvNKiGT~~lAl~Ak~~~VPVyV~ae 564 (658)
-|-....... -.|-.||..+.-+|+.++..|+.+..
T Consensus 98 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS 141 (372)
T 3slg_A 98 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPST 141 (372)
T ss_dssp CBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECC
T ss_pred cCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCc
Confidence 4432211110 24678999999999888855554443
No 352
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=24.29 E-value=84 Score=28.52 Aligned_cols=72 Identities=17% Similarity=0.187 Sum_probs=35.7
Q ss_pred cCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHH-HHHHhCCCcEEEEcchHHHHHh------hhccE
Q 006152 453 RDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLL-RRLVRKGLSCTYTHINAISYII------HEVTR 525 (658)
Q Consensus 453 ~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La-~eL~~~GI~vT~I~DsAv~~~M------~~Vd~ 525 (658)
..+.+||=.|+++-. +...+.+.+...+|+.+|-.|.. .+++ +.+...|+.++++...+...+- ...|.
T Consensus 29 ~~~~~vLDiG~G~G~--~~~~l~~~~~~~~v~~vD~~~~~--~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~ 104 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGC--IAVSIALACPGVSVTAVDLSMDA--LAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHA 104 (215)
T ss_dssp CTTEEEEEEESSBCH--HHHHHHHHCTTEEEEEEECC---------------------CCHHHHHHHHHHHHHTTCCBSE
T ss_pred CCCCEEEEecCCHhH--HHHHHHHhCCCCeEEEEECCHHH--HHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccE
Confidence 568899999887643 22333344566799999987753 2333 3455566677777766655433 35777
Q ss_pred EEE
Q 006152 526 VFL 528 (658)
Q Consensus 526 Vlv 528 (658)
|+.
T Consensus 105 i~~ 107 (215)
T 4dzr_A 105 IVS 107 (215)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 353
>2egx_A Putative acetylglutamate kinase; struc genomics, NPPSFA, national project on protein structural AN functional analyses; 1.92A {Thermus thermophilus} PDB: 3u6u_A
Probab=24.04 E-value=5.3e+02 Score=25.42 Aligned_cols=46 Identities=13% Similarity=0.146 Sum_probs=28.0
Q ss_pred HHHHhhhccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 516 ISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 516 v~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
+-.++..-..+|+..-++-.+|.+.|--+=...|++|...+--.++
T Consensus 143 i~~ll~~g~ipVi~~v~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~li 188 (269)
T 2egx_A 143 LDLLLQAGYLPVLTPPALSYENEAINTDGDQIAALLATLYGAEALV 188 (269)
T ss_dssp HHHHHHTTCEEEEECCEEETTSCEEEECHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHCCCEEEEcCcEECCCCCEEEeCHHHHHHHHHHHcCCCEEE
Confidence 3444555556667655556677776544445566788888875443
No 354
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=23.95 E-value=1.1e+02 Score=30.96 Aligned_cols=53 Identities=19% Similarity=0.234 Sum_probs=34.8
Q ss_pred hccCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEE
Q 006152 451 KIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTY 510 (658)
Q Consensus 451 ~I~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~ 510 (658)
.++.|++||.+|-+.+=...+.-|+..|- +||+++..+.. .++ +.+.|....+
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga--~Vi~~~~~~~~--~~~---~~~lGa~~v~ 225 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGA--EVSVFARNEHK--KQD---ALSMGVKHFY 225 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTC--EEEEECSSSTT--HHH---HHHTTCSEEE
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCC--eEEEEeCCHHH--HHH---HHhcCCCeec
Confidence 56789999999976542234455555554 79998877653 233 3456877666
No 355
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=23.79 E-value=1.1e+02 Score=31.19 Aligned_cols=100 Identities=14% Similarity=0.134 Sum_probs=50.3
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchH------HHHHhh----hcc
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINA------ISYIIH----EVT 524 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsA------v~~~M~----~Vd 524 (658)
..+++|.|.+.++..+++.+...| -+|++.+ |.+.+... .+...|+.+..+.... +..+-+ ++.
T Consensus 103 ~~v~~~~g~t~a~~~~~~~~~~~g--d~Vl~~~--~~~~~~~~--~~~~~g~~~~~v~~~~~~~~~~~~~l~~~l~~~~~ 176 (409)
T 2gb3_A 103 ENVLVTNGGSEAILFSFAVIANPG--DEILVLE--PFYANYNA--FAKIAGVKLIPVTRRMEEGFAIPQNLESFINERTK 176 (409)
T ss_dssp GGEEEESHHHHHHHHHHHHHCCTT--CEEEEEE--SCCTHHHH--HHHHHTCEEEEEECCGGGTSCCCTTGGGGCCTTEE
T ss_pred HHEEEeCCHHHHHHHHHHHhCCCC--CEEEEcC--CCchhHHH--HHHHcCCEEEEeccCCCCCCccHHHHHHhhCcCCe
Confidence 467888887778876666554333 3565543 45555433 3444677777765321 111111 222
Q ss_pred EEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 525 RVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 525 ~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
.|++- .--...|.++..-=--.|+-+|++|++.+++
T Consensus 177 ~v~~~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 212 (409)
T 2gb3_A 177 GIVLS-NPCNPTGVVYGKDEMRYLVEIAERHGLFLIV 212 (409)
T ss_dssp EEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEC-CCCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 33321 1100123332221123566688999998776
No 356
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=23.76 E-value=3.5e+02 Score=27.53 Aligned_cols=74 Identities=12% Similarity=0.088 Sum_probs=45.7
Q ss_pred cCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEcce
Q 006152 453 RDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGAS 531 (658)
Q Consensus 453 ~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~VlvGAd 531 (658)
.+..+|+.+|.+..-...++.+.+.....+|+|.+-.+ ..-.+++.++...++++. . ++ +..++ ++|.|++..-
T Consensus 123 ~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~-~~a~~la~~~~~~~~~~~-~-~~-~~e~v-~aDvVi~aTp 196 (322)
T 1omo_A 123 KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVRE-KAAKKFVSYCEDRGISAS-V-QP-AEEAS-RCDVLVTTTP 196 (322)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSH-HHHHHHHHHHHHTTCCEE-E-CC-HHHHT-SSSEEEECCC
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCH-HHHHHHHHHHHhcCceEE-E-CC-HHHHh-CCCEEEEeeC
Confidence 46789999999876555555544433345666665433 334566777776667766 3 33 33445 8999987543
No 357
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=23.75 E-value=1.5e+02 Score=25.25 Aligned_cols=79 Identities=14% Similarity=0.165 Sum_probs=40.8
Q ss_pred CeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHH-HHhh--hccEEEEcceeEecCCCeecccchHHHHHHHh--
Q 006152 479 KQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAIS-YIIH--EVTRVFLGASSVLSNGTVCSRVGTACVAMVAY-- 553 (658)
Q Consensus 479 k~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~-~~M~--~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak-- 553 (658)
+..+|+|+|..+.. ...+...|.+.|..|....+..-+ ..+. ..|.||+..+ +.++ -|.-.+..+-+
T Consensus 13 ~~~~iLivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvl~D~~--mp~~-----~g~~~~~~lr~~~ 84 (143)
T 3m6m_D 13 RSMRMLVADDHEAN-RMVLQRLLEKAGHKVLCVNGAEQVLDAMAEEDYDAVIVDLH--MPGM-----NGLDMLKQLRVMQ 84 (143)
T ss_dssp --CEEEEECSSHHH-HHHHHHHHHC--CEEEEESSHHHHHHHHHHSCCSEEEEESC--CSSS-----CHHHHHHHHHHHH
T ss_pred ccceEEEEeCCHHH-HHHHHHHHHHcCCeEEEeCCHHHHHHHHhcCCCCEEEEeCC--CCCC-----CHHHHHHHHHhch
Confidence 45678888876543 223346677778877766543222 1222 5788888543 3322 23333333321
Q ss_pred ---hCCCCeEeeccc
Q 006152 554 ---GFHIPVLVCCEA 565 (658)
Q Consensus 554 ---~~~VPVyV~aet 565 (658)
...+|+++++..
T Consensus 85 ~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 85 ASGMRYTPVVVLSAD 99 (143)
T ss_dssp HTTCCCCCEEEEESC
T ss_pred hccCCCCeEEEEeCC
Confidence 135899998764
No 358
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=23.75 E-value=93 Score=29.50 Aligned_cols=81 Identities=11% Similarity=0.188 Sum_probs=43.8
Q ss_pred CCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEcceeEecCCCeec----ccchHHHHHHHh
Q 006152 478 GKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASSVLSNGTVCS----RVGTACVAMVAY 553 (658)
Q Consensus 478 gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~VlvGAdaV~aNG~VvN----KiGT~~lAl~Ak 553 (658)
+++.+|.|++- +.+ =..+.+.|.+.|+.++++.+.. -+.++|.+|++-- +...+. ..+...+-.-+.
T Consensus 18 ~~~~~I~ii~~-~~~-~~~~~~~l~~~g~~~~~~~~~~---~l~~~d~iil~GG----~~~~~~~~~~~~~~~~~i~~~~ 88 (208)
T 2iss_D 18 GSHMKIGVLGV-QGD-VREHVEALHKLGVETLIVKLPE---QLDMVDGLILPGG----ESTTMIRILKEMDMDEKLVERI 88 (208)
T ss_dssp --CCEEEEECS-SSC-HHHHHHHHHHTTCEEEEECSGG---GGGGCSEEEECSS----CHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCCcEEEEEEC-CCc-hHHHHHHHHHCCCEEEEeCChH---HHhhCCEEEECCC----cHHHHHhhhhhhhHHHHHHHHH
Confidence 45567777764 332 2334577888999998887542 1457888776321 001111 111222222233
Q ss_pred hCCCCeEeeccccc
Q 006152 554 GFHIPVLVCCEAYK 567 (658)
Q Consensus 554 ~~~VPVyV~aetyK 567 (658)
+.++|++-+|--+-
T Consensus 89 ~~g~PilGIC~G~Q 102 (208)
T 2iss_D 89 NNGLPVFATCAGVI 102 (208)
T ss_dssp HTTCCEEEETHHHH
T ss_pred HCCCeEEEECHHHH
Confidence 57999997776543
No 359
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=23.72 E-value=3.2e+02 Score=27.70 Aligned_cols=100 Identities=14% Similarity=-0.007 Sum_probs=54.5
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc---------hHHHHHhh-----
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI---------NAISYIIH----- 521 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D---------sAv~~~M~----- 521 (658)
.+++|-|.+.++..++....+.| -+|++.+ |.+.+.... +...|..+..+.. ..+-..+.
T Consensus 103 ~i~~t~g~~~al~~~~~~~~~~g--d~Vl~~~--p~~~~~~~~--~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 176 (413)
T 3t18_A 103 SAIATPGGTGAIRSAIFSYLDEG--DPLICHD--YYWAPYRKI--CEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRD 176 (413)
T ss_dssp EEEEESHHHHHHHHHHHHHCCSS--CEEEEES--SCCTHHHHH--HHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHH
T ss_pred cEEEcCccHHHHHHHHHHhcCCC--CEEEECC--CCcccHHHH--HHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhc
Confidence 57777777777766666554334 3566654 666655433 3446777777752 12333333
Q ss_pred hccEEEEccee-EecCCCeecccchHHHHHHHh------hCCCCeEe
Q 006152 522 EVTRVFLGASS-VLSNGTVCSRVGTACVAMVAY------GFHIPVLV 561 (658)
Q Consensus 522 ~Vd~VlvGAda-V~aNG~VvNKiGT~~lAl~Ak------~~~VPVyV 561 (658)
+..++++=..- --..|.++..---..++-+|+ .|++.+++
T Consensus 177 ~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~ 223 (413)
T 3t18_A 177 SDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIV 223 (413)
T ss_dssp CSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEE
T ss_pred CCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Confidence 23323332221 133466666555556666777 78876654
No 360
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=23.70 E-value=98 Score=29.93 Aligned_cols=109 Identities=10% Similarity=-0.006 Sum_probs=55.9
Q ss_pred EEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCC-----chHHHHHHHHHhCCCcEEEEc----c-hHHHHHhhhccEEE
Q 006152 458 LLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPK-----HEGKLLLRRLVRKGLSCTYTH----I-NAISYIIHEVTRVF 527 (658)
Q Consensus 458 ILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~-----~EG~~La~eL~~~GI~vT~I~----D-sAv~~~M~~Vd~Vl 527 (658)
++-.+++.-+...|.+-.+.-..-+|.++.+.-. .-.....+.|.+.|+.++.+. + ...-..+.++|.|+
T Consensus 5 l~l~s~~~~~~~~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~~i~~~~~~~~~~~l~~ad~I~ 84 (206)
T 3l4e_A 5 LFLTSSFKDVVPLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIATESLGEITTKLRKNDFIY 84 (206)
T ss_dssp EEEESCGGGCHHHHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEECCTTTSCHHHHHHHHHHSSEEE
T ss_pred eEEeecccchHHHHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEEEecCCChHHHHHHHHhCCEEE
Confidence 5555666656565654432212245555543221 123455688999999988873 2 22334567889988
Q ss_pred EcceeEecCCCeecccchHHHHHHHhhCCCCeEe-ecccc
Q 006152 528 LGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV-CCEAY 566 (658)
Q Consensus 528 vGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV-~aety 566 (658)
++-=.-+.=...+.+.|...+=.-+-..|+|++= |+...
T Consensus 85 l~GG~~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~sAGa~ 124 (206)
T 3l4e_A 85 VTGGNTFFLLQELKRTGADKLILEEIAAGKLYIGESAGAV 124 (206)
T ss_dssp ECCSCHHHHHHHHHHHTHHHHHHHHHHTTCEEEEETHHHH
T ss_pred ECCCCHHHHHHHHHHCChHHHHHHHHHcCCeEEEECHHHH
Confidence 7521111111122333433332222335899994 44433
No 361
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=23.70 E-value=2.9e+02 Score=30.20 Aligned_cols=109 Identities=17% Similarity=0.235 Sum_probs=64.9
Q ss_pred CEEEeeCChHHHHHHH-HHHHHcCCeeEEEEeCCC-CCch-HHHHHHHHHhCCCcEEEE-cc----hHHHHHhhh-----
Q 006152 456 DVLLTYGSSSAVEMIL-QHAHELGKQFRVVIVDSR-PKHE-GKLLLRRLVRKGLSCTYT-HI----NAISYIIHE----- 522 (658)
Q Consensus 456 dvILT~g~SsaV~~vL-~~A~e~gk~f~ViV~ESR-P~~E-G~~La~eL~~~GI~vT~I-~D----sAv~~~M~~----- 522 (658)
.++|..|-+.-+...| +...++|.. +|+++.-+ +..+ -.++..+|.+.|..++++ +| .++..++.+
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~Ga~-~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g 318 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQGAA-HLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA 318 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHTTCS-EEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred CEEEEECCCCchHHHHHHHHHHCCCc-EEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence 6777777766554444 334445532 34444332 2233 356678999999998887 34 356666653
Q ss_pred -ccEEEEcceeEecCCCe-------------ecccchHHHHHHHhhCCCCeEeeccc
Q 006152 523 -VTRVFLGASSVLSNGTV-------------CSRVGTACVAMVAYGFHIPVLVCCEA 565 (658)
Q Consensus 523 -Vd~VlvGAdaV~aNG~V-------------vNKiGT~~lAl~Ak~~~VPVyV~aet 565 (658)
+|.||-.|-....++.+ .|-.|++.+.-+...+...++|++-+
T Consensus 319 ~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS 375 (496)
T 3mje_A 319 PLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSS 375 (496)
T ss_dssp CEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEE
T ss_pred CCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeC
Confidence 56666655332233332 34568888887777777777776554
No 362
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=23.66 E-value=2.9e+02 Score=28.01 Aligned_cols=93 Identities=9% Similarity=0.036 Sum_probs=46.9
Q ss_pred CEEEeeCChHHHHHHHHHH-HHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch---------HHHHHhh-hcc
Q 006152 456 DVLLTYGSSSAVEMILQHA-HELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN---------AISYIIH-EVT 524 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A-~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds---------Av~~~M~-~Vd 524 (658)
+.|+|-+.+.++..+|..+ ...| -+|++.+ |.+.+. ...+...|+.+..+... .+-..+. ++.
T Consensus 80 ~~v~~~~Gt~a~~~~l~~~~~~~g--d~vl~~~--~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~ 153 (399)
T 2oga_A 80 HAVGVNSGMDALQLALRGLGIGPG--DEVIVPS--HTYIAS--WLAVSATGATPVPVEPHEDHPTLDPLLVEKAITPRTR 153 (399)
T ss_dssp EEEEESCHHHHHHHHHHHTTCCTT--CEEEEES--SSCTHH--HHHHHHTTCEEEEECBCSSSSSBCHHHHHHHCCTTEE
T ss_pred eEEEecCHHHHHHHHHHHhCCCCc--CEEEECC--CccHHH--HHHHHHCCCEEEEEecCCCCCCcCHHHHHHhcCCCCe
Confidence 5666655555665555544 2223 3566654 455553 23455678888877521 1222222 232
Q ss_pred EEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 525 RVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 525 ~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
.|++ . -..|.+.. --.|+-+|++|++.+++
T Consensus 154 ~v~~--~--n~tG~~~~---l~~i~~l~~~~~~~li~ 183 (399)
T 2oga_A 154 ALLP--V--HLYGHPAD---MDALRELADRHGLHIVE 183 (399)
T ss_dssp EECC--B--CGGGCCCC---HHHHHHHHHHHTCEECE
T ss_pred EEEE--e--CCcCCccC---HHHHHHHHHHcCCEEEE
Confidence 3332 1 11233221 24577788888887765
No 363
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=23.60 E-value=84 Score=29.97 Aligned_cols=97 Identities=10% Similarity=0.030 Sum_probs=53.3
Q ss_pred EEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHhhh--ccEEEEcceeEe
Q 006152 457 VLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHE--VTRVFLGASSVL 534 (658)
Q Consensus 457 vILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M~~--Vd~VlvGAdaV~ 534 (658)
+||..|-+.-+...|.+...+| .+|+++.-++..+ .|+.+-+.....+..++.. +|.||--|-...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~g--~~V~~~~r~~~~~----------~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~ 69 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLSER--HEVIKVYNSSEIQ----------GGYKLDLTDFPRLEDFIIKKRPDVIINAAAMTD 69 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHTTT--SCEEEEESSSCCT----------TCEECCTTSHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred EEEEECCCChhHHHHHHHHhcC--CeEEEecCCCcCC----------CCceeccCCHHHHHHHHHhcCCCEEEECCcccC
Confidence 4677776665555554444344 6788776554321 2322221112355566665 777766543211
Q ss_pred cCC--------CeecccchHHHHHHHhhCCCCeEeeccc
Q 006152 535 SNG--------TVCSRVGTACVAMVAYGFHIPVLVCCEA 565 (658)
Q Consensus 535 aNG--------~VvNKiGT~~lAl~Ak~~~VPVyV~aet 565 (658)
.+. --+|-.|+..+.-+|+..++.|+.+...
T Consensus 70 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~ 108 (273)
T 2ggs_A 70 VDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTD 108 (273)
T ss_dssp HHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEG
T ss_pred hhhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecc
Confidence 100 0135678999998998888876655543
No 364
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=23.59 E-value=1.3e+02 Score=30.58 Aligned_cols=36 Identities=14% Similarity=0.074 Sum_probs=23.3
Q ss_pred HHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEc
Q 006152 469 MILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTH 512 (658)
Q Consensus 469 ~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~ 512 (658)
.+.+.+.++|...+|++.+ .+...+...|+++.-+.
T Consensus 34 ~La~~L~~~GheV~v~~~~--------~~~~~~~~~G~~~~~~~ 69 (398)
T 4fzr_A 34 PLSWALRAAGHEVLVAASE--------NMGPTVTGAGLPFAPTC 69 (398)
T ss_dssp HHHHHHHHTTCEEEEEEEG--------GGHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHCCCEEEEEcCH--------HHHHHHHhCCCeeEecC
Confidence 4455566678777766542 13456777899887775
No 365
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=23.55 E-value=4.2e+02 Score=26.49 Aligned_cols=100 Identities=12% Similarity=0.071 Sum_probs=48.1
Q ss_pred CCEEEeeCChHHHHHHHHHHH--HcCCeeEEEEeCCCCCchHHHH-HHHHHhCCC------------cEEEEc--c-hHH
Q 006152 455 GDVLLTYGSSSAVEMILQHAH--ELGKQFRVVIVDSRPKHEGKLL-LRRLVRKGL------------SCTYTH--I-NAI 516 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~--e~gk~f~ViV~ESRP~~EG~~L-a~eL~~~GI------------~vT~I~--D-sAv 516 (658)
..+++|.|.+.++..+|+.+. ..| -+|++.+. .+.|... +..+ .|. ++..+. | ..+
T Consensus 105 ~~v~~~~gg~~a~~~al~~~~~~~~~--~~vi~~~~--~y~~~~~~~~~~--~g~~~~~~~~~p~~~~~~~~~~~d~~~l 178 (395)
T 1vef_A 105 NRVFPVNSGTEANEAALKFARAHTGR--KKFVAAMR--GFSGRTMGSLSV--TWEPKYREPFLPLVEPVEFIPYNDVEAL 178 (395)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHSC--CEEEEETT--CCCCSSHHHHHT--CCCHHHHGGGCSCSSCEEEECTTCHHHH
T ss_pred CEEEEcCcHHHHHHHHHHHHHHHhCC--CeEEEEcC--CcCCCchhhhhh--cCCcccccccCCCCCCeeEeCCCcHHHH
Confidence 357777777777776666542 333 35776652 2222111 1111 222 244433 2 223
Q ss_pred HHHhhhccEEEEcceeEecC-CCeecccc-hHHHHHHHhhCCCCeEe
Q 006152 517 SYIIHEVTRVFLGASSVLSN-GTVCSRVG-TACVAMVAYGFHIPVLV 561 (658)
Q Consensus 517 ~~~M~~Vd~VlvGAdaV~aN-G~VvNKiG-T~~lAl~Ak~~~VPVyV 561 (658)
-..+.+=.++|+ ...+..+ |.++..-+ --.|+-+|++|++.+++
T Consensus 179 ~~~i~~~~~~v~-~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~ 224 (395)
T 1vef_A 179 KRAVDEETAAVI-LEPVQGEGGVRPATPEFLRAAREITQEKGALLIL 224 (395)
T ss_dssp HHHCCTTEEEEE-ECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHhccCEEEEE-EeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Confidence 333332123433 3334432 44444333 34577789999998776
No 366
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=23.53 E-value=1.4e+02 Score=30.22 Aligned_cols=113 Identities=9% Similarity=0.025 Sum_probs=56.1
Q ss_pred EEEeeCChHHHHHHHHHHHHcCCeeEEE-EeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEccee---
Q 006152 457 VLLTYGSSSAVEMILQHAHELGKQFRVV-IVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASS--- 532 (658)
Q Consensus 457 vILT~g~SsaV~~vL~~A~e~gk~f~Vi-V~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~VlvGAda--- 532 (658)
.|..+|.+......+... ...++|+ |++..+.....+++..+.+.|+.+....|-.-..--.++|.|++..-.
T Consensus 4 rvgiiG~G~~~~~~~~~l---~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~H 80 (337)
T 3ip3_A 4 KICVIGSSGHFRYALEGL---DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTVFSLN 80 (337)
T ss_dssp EEEEECSSSCHHHHHTTC---CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSSHHHH
T ss_pred EEEEEccchhHHHHHHhc---CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCCcchH
Confidence 455666643332222222 3456655 566665334455566666778866655542222222468999885321
Q ss_pred ------EecCCC--------eecccchHHHHHHHhhCCCCe-Eeecccccccccc
Q 006152 533 ------VLSNGT--------VCSRVGTACVAMVAYGFHIPV-LVCCEAYKFHERV 572 (658)
Q Consensus 533 ------V~aNG~--------VvNKiGT~~lAl~Ak~~~VPV-yV~aetyKf~~~~ 572 (658)
.+..|- ..+.--...+.-+|+.+++.+ +.++..+.|++.+
T Consensus 81 ~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~~~v~~~~R~~p~~ 135 (337)
T 3ip3_A 81 GKILLEALERKIHAFVEKPIATTFEDLEKIRSVYQKVRNEVFFTAMFGIRYRPHF 135 (337)
T ss_dssp HHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTTTCCEEECCGGGGSHHH
T ss_pred HHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCceEEEecccccCCHHH
Confidence 222221 222333444555666667663 2334455565543
No 367
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=23.44 E-value=2.3e+02 Score=28.66 Aligned_cols=52 Identities=25% Similarity=0.381 Sum_probs=31.3
Q ss_pred CCCEEEeeCChHHHH-HHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEc
Q 006152 454 DGDVLLTYGSSSAVE-MILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTH 512 (658)
Q Consensus 454 dgdvILT~g~SsaV~-~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~ 512 (658)
.|++||.+|-+..|. .+++.|+..| .+||++++.+. -.+++++ .|....+-.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~G--a~Vi~~~~~~~--~~~~~~~---lGa~~vi~~ 202 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYG--LRVITTASRNE--TIEWTKK---MGADIVLNH 202 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT--CEEEEECCSHH--HHHHHHH---HTCSEEECT
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcC--CEEEEEeCCHH--HHHHHHh---cCCcEEEEC
Confidence 799999995444332 3344455555 48999987653 3444444 576655443
No 368
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=23.28 E-value=1.8e+02 Score=29.63 Aligned_cols=73 Identities=21% Similarity=0.280 Sum_probs=43.6
Q ss_pred EEEeeCChHHHHHHHHHHHHcCC-eeEEEE-eCCCCCchHHHHHHHHHhCCCcEEEEcc---------hHHHHHhh--hc
Q 006152 457 VLLTYGSSSAVEMILQHAHELGK-QFRVVI-VDSRPKHEGKLLLRRLVRKGLSCTYTHI---------NAISYIIH--EV 523 (658)
Q Consensus 457 vILT~g~SsaV~~vL~~A~e~gk-~f~ViV-~ESRP~~EG~~La~eL~~~GI~vT~I~D---------sAv~~~M~--~V 523 (658)
.||.-|+++.++.+| .+++.|. ..+|.+ +-.+|...+ + -.+.|||+.+++. ..+...++ ++
T Consensus 94 ~vl~Sg~g~~l~~ll-~~~~~g~l~~~i~~Visn~~~~~~--~---A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~ 167 (286)
T 3n0v_A 94 VIMVSKADHCLNDLL-YRQRIGQLGMDVVAVVSNHPDLEP--L---AHWHKIPYYHFALDPKDKPGQERKVLQVIEETGA 167 (286)
T ss_dssp EEEESSCCHHHHHHH-HHHHTTSSCCEEEEEEESSSTTHH--H---HHHTTCCEEECCCBTTBHHHHHHHHHHHHHHHTC
T ss_pred EEEEeCCCCCHHHHH-HHHHCCCCCcEEEEEEeCcHHHHH--H---HHHcCCCEEEeCCCcCCHHHHHHHHHHHHHhcCC
Confidence 567778889996655 4555554 344443 333555433 2 3468999998752 23444554 68
Q ss_pred cEEEEcce-eEec
Q 006152 524 TRVFLGAS-SVLS 535 (658)
Q Consensus 524 d~VlvGAd-aV~a 535 (658)
|.+++-.- .|+.
T Consensus 168 Dlivla~y~~il~ 180 (286)
T 3n0v_A 168 ELVILARYMQVLS 180 (286)
T ss_dssp SEEEESSCCSCCC
T ss_pred CEEEecccccccC
Confidence 98888543 4543
No 369
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=23.27 E-value=3e+02 Score=28.55 Aligned_cols=103 Identities=13% Similarity=0.069 Sum_probs=45.5
Q ss_pred CCEEEeeCChHHHHHHHHHHHH-cCCeeEEEEeCCCCCchHHHHH-HHHH--------hCCCc------EEEEc--c-hH
Q 006152 455 GDVLLTYGSSSAVEMILQHAHE-LGKQFRVVIVDSRPKHEGKLLL-RRLV--------RKGLS------CTYTH--I-NA 515 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e-~gk~f~ViV~ESRP~~EG~~La-~eL~--------~~GI~------vT~I~--D-sA 515 (658)
..+++|.|-+.+++.+|+.|.. .++ -+|++.+ |.+.|.... ..+. ..|++ +..+. | ..
T Consensus 114 ~~v~~~~gg~eA~~~al~~ar~~~~~-~~vi~~~--~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~ 190 (453)
T 2cy8_A 114 RKLRFTGSGTETTLLALRVARAFTGR-RMILRFE--GHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRPDDIEG 190 (453)
T ss_dssp SEEEEESCHHHHHHHHHHHHHHHHCC-CEEEEEC--C----------------------------CGGGEEEECTTCHHH
T ss_pred CEEEEeCCHHHHHHHHHHHHHHhhCC-CEEEEEc--CCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCCCCHHH
Confidence 3567777777788777776432 233 3677777 555554432 1111 13553 33332 1 33
Q ss_pred HHHHhhh---ccEEEEcceeEecC-CCeecccch-HHHHHHHhhCCCCeEe
Q 006152 516 ISYIIHE---VTRVFLGASSVLSN-GTVCSRVGT-ACVAMVAYGFHIPVLV 561 (658)
Q Consensus 516 v~~~M~~---Vd~VlvGAdaV~aN-G~VvNKiGT-~~lAl~Ak~~~VPVyV 561 (658)
+-..+.+ -.++|+ ++-+..+ |.++..-+- -.|+-+|++|++.+++
T Consensus 191 le~~l~~~~~~~~~vi-~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~ 240 (453)
T 2cy8_A 191 MREVFANHGSDIAAFI-AEPVGSHFGVTPVSDSFLREGAELARQYGALFIL 240 (453)
T ss_dssp HHHHHHHHGGGEEEEE-ECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHhcCCCEEEEE-ECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 4444442 112322 3334333 334433332 3466689999997664
No 370
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=23.17 E-value=2.2e+02 Score=29.10 Aligned_cols=49 Identities=24% Similarity=0.239 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHH-HHhCCCcEEEEcchH
Q 006152 466 AVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRR-LVRKGLSCTYTHINA 515 (658)
Q Consensus 466 aV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~e-L~~~GI~vT~I~DsA 515 (658)
++...+.-|.+.+..|.||+ --.|-.-|-.-+++ |.+.||||.+|.|.-
T Consensus 52 ~~~~~~~~~~~~~pDfvI~i-sPN~a~PGP~~ARE~l~~~~iP~IvI~D~p 101 (283)
T 1qv9_A 52 AVEMALDIAEDFEPDFIVYG-GPNPAAPGPSKAREMLADSEYPAVIIGDAP 101 (283)
T ss_dssp HHHHHHHHHHHHCCSEEEEE-CSCTTSHHHHHHHHHHHTSSSCEEEEEEGG
T ss_pred HHHHhhhhhhhcCCCEEEEE-CCCCCCCCchHHHHHHHhCCCCEEEEcCCc
Confidence 34333333445577776665 34567788888855 678999999999965
No 371
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=23.07 E-value=2.7e+02 Score=28.41 Aligned_cols=54 Identities=20% Similarity=0.235 Sum_probs=32.5
Q ss_pred hccCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEE
Q 006152 451 KIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYT 511 (658)
Q Consensus 451 ~I~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I 511 (658)
.++.|++||.+|.+..=...+..|+..|- +||+++..+. -.+++ .+.|....+-
T Consensus 186 ~~~~g~~VlV~G~G~vG~~a~qla~~~Ga--~Vi~~~~~~~--~~~~~---~~lGa~~vi~ 239 (363)
T 3uog_A 186 HLRAGDRVVVQGTGGVALFGLQIAKATGA--EVIVTSSSRE--KLDRA---FALGADHGIN 239 (363)
T ss_dssp CCCTTCEEEEESSBHHHHHHHHHHHHTTC--EEEEEESCHH--HHHHH---HHHTCSEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC--EEEEEecCch--hHHHH---HHcCCCEEEc
Confidence 36789999999955432233444555554 7898886542 23333 4457765554
No 372
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=22.99 E-value=1.9e+02 Score=24.24 Aligned_cols=57 Identities=12% Similarity=0.122 Sum_probs=37.8
Q ss_pred EEEeeCChHHHHHHHHHHHHcCCeeEEEEeCC-CCCchHHHHHHHHHh-C--CCcEEEEcc
Q 006152 457 VLLTYGSSSAVEMILQHAHELGKQFRVVIVDS-RPKHEGKLLLRRLVR-K--GLSCTYTHI 513 (658)
Q Consensus 457 vILT~g~SsaV~~vL~~A~e~gk~f~ViV~ES-RP~~EG~~La~eL~~-~--GI~vT~I~D 513 (658)
+|.+..++......+......+..+.++++|- -|...|..+++.|.+ . .+++.+++.
T Consensus 29 ~v~~~~~~~~al~~~~~~~~~~~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~ 89 (133)
T 2r25_B 29 NIELACDGQEAFDKVKELTSKGENYNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVALTA 89 (133)
T ss_dssp CEEEESSHHHHHHHHHHHHHHTCCCSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEEES
T ss_pred eEEEECCHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCChHHHHHHHHhhcCCCCCEEEEEC
Confidence 46666666544344554444456788888874 588899999999875 2 466666654
No 373
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=22.95 E-value=2.4e+02 Score=22.12 Aligned_cols=77 Identities=5% Similarity=0.117 Sum_probs=44.1
Q ss_pred EEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchH--HHHHhh-hccEEEEcceeEecCCCeecccchHHHHHHHhh---C
Q 006152 482 RVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINA--ISYIIH-EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYG---F 555 (658)
Q Consensus 482 ~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsA--v~~~M~-~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~---~ 555 (658)
+|+++|..+.. ...+...|...|+.|....+.. ...+-. ..|.||+..+. .+ .-|.-.+..+.+. .
T Consensus 3 ~iliv~~~~~~-~~~l~~~l~~~g~~v~~~~~~~~~~~~l~~~~~dlii~d~~~--~~-----~~~~~~~~~l~~~~~~~ 74 (119)
T 2j48_A 3 HILLLEEEDEA-ATVVCEMLTAAGFKVIWLVDGSTALDQLDLLQPIVILMAWPP--PD-----QSCLLLLQHLREHQADP 74 (119)
T ss_dssp EEEEECCCHHH-HHHHHHHHHHTTCEEEEESCHHHHHHHHHHHCCSEEEEECST--TC-----CTHHHHHHHHHHTCCCS
T ss_pred EEEEEeCCHHH-HHHHHHHHHhCCcEEEEecCHHHHHHHHHhcCCCEEEEecCC--CC-----CCHHHHHHHHHhccccC
Confidence 57777766533 2344566777888877665432 222222 57888886542 11 2243444444444 4
Q ss_pred CCCeEeecccc
Q 006152 556 HIPVLVCCEAY 566 (658)
Q Consensus 556 ~VPVyV~aety 566 (658)
++|+++++...
T Consensus 75 ~~~ii~~~~~~ 85 (119)
T 2j48_A 75 HPPLVLFLGEP 85 (119)
T ss_dssp SCCCEEEESSC
T ss_pred CCCEEEEeCCC
Confidence 79999987754
No 374
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=22.87 E-value=5.3e+02 Score=26.42 Aligned_cols=102 Identities=13% Similarity=0.157 Sum_probs=50.7
Q ss_pred CCEEEeeCChHHHHHHHHHHHH-------cCCeeEEEEeCCCCCchHHHH-HHHH-----HhCCC-----cEEEEcc---
Q 006152 455 GDVLLTYGSSSAVEMILQHAHE-------LGKQFRVVIVDSRPKHEGKLL-LRRL-----VRKGL-----SCTYTHI--- 513 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e-------~gk~f~ViV~ESRP~~EG~~L-a~eL-----~~~GI-----~vT~I~D--- 513 (658)
..+++|-|.+.+++.+|+.+.. .|+ -+|++.+ |.+.|... +..+ ...|. .+..++-
T Consensus 115 ~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~-~~vi~~~--~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~ 191 (420)
T 2pb2_A 115 ERVLFMNSGTEANETAFKLARHYACVRHSPFK-TKIIAFH--NAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDL 191 (420)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHHHHTCTTC-CEEEEET--TCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECTTCH
T ss_pred CeEEEeCCHHHHHHHHHHHHHHHhhhccCCCC-CEEEEEe--CCcCCcCHHHHHhcCCccccccCCCCCCCeEEecCCCH
Confidence 4577777777788777776543 232 3666665 44433221 1112 11221 2555542
Q ss_pred hHHHHHhh-hccEEEEcceeEecCCCe--ecccchHHHHHHHhhCCCCeEe
Q 006152 514 NAISYIIH-EVTRVFLGASSVLSNGTV--CSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 514 sAv~~~M~-~Vd~VlvGAdaV~aNG~V--vNKiGT~~lAl~Ak~~~VPVyV 561 (658)
..+-..+. ++..|++ +-+...|++ +..-=--.|+-+|++|++.+++
T Consensus 192 ~~le~~i~~~~~~vi~--~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~ 240 (420)
T 2pb2_A 192 HAVKAVMDDHTCAVVV--EPIQGEGGVQAATPEFLKGLRDLCDEHQALLVF 240 (420)
T ss_dssp HHHHHHCCTTEEEEEE--CSEETTTTSEECCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHhccCceEEEE--eCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEE
Confidence 23333333 3333433 334444443 2222224466789999997765
No 375
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=22.80 E-value=1.9e+02 Score=29.15 Aligned_cols=89 Identities=11% Similarity=0.078 Sum_probs=49.7
Q ss_pred CEEEeeCChHHHHHHHHHH-HHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchH------HHHH---hh-hcc
Q 006152 456 DVLLTYGSSSAVEMILQHA-HELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINA------ISYI---IH-EVT 524 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A-~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsA------v~~~---M~-~Vd 524 (658)
..|+|-+.+.++..+|..+ ...| -+|++. .|.+.+...+ +...|+.+.++.... +..+ +. ++.
T Consensus 73 ~~i~~~~gt~al~~~l~~~~~~~g--d~vl~~--~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~ 146 (391)
T 3dr4_A 73 HAIACNNGTTALHLALVAMGIGPG--DEVIVP--SLTYIASANS--VTYCGATPVLVDNDPRTFNLDAAKLEALITPRTK 146 (391)
T ss_dssp EEEEESSHHHHHHHHHHHHTCCTT--CEEEEE--SSSCTHHHHH--HHHTTCEEEEECBCTTTCSBCGGGSGGGCCTTEE
T ss_pred cEEEeCCHHHHHHHHHHHcCCCCc--CEEEEC--CCchHHHHHH--HHHCCCEEEEEecCccccCcCHHHHHHhcCCCce
Confidence 5677766666776666655 3333 356664 3566564333 445788888775321 1111 11 233
Q ss_pred EEEEcceeEecCCCeecccch----HHHHHHHhhCCCCeEe
Q 006152 525 RVFLGASSVLSNGTVCSRVGT----ACVAMVAYGFHIPVLV 561 (658)
Q Consensus 525 ~VlvGAdaV~aNG~VvNKiGT----~~lAl~Ak~~~VPVyV 561 (658)
.|++ .|..|+ -.|+-+|++|++.+++
T Consensus 147 ~v~~-----------~n~tG~~~~~~~i~~l~~~~~~~li~ 176 (391)
T 3dr4_A 147 AIMP-----------VHLYGQICDMDPILEVARRHNLLVIE 176 (391)
T ss_dssp EECC-----------BCGGGCCCCHHHHHHHHHHTTCEEEE
T ss_pred EEEE-----------ECCCCChhhHHHHHHHHHHcCCEEEE
Confidence 3331 234443 4577789999998876
No 376
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=22.79 E-value=3.2e+02 Score=28.18 Aligned_cols=17 Identities=18% Similarity=0.129 Sum_probs=13.1
Q ss_pred hHHHHHHHhhCCCCeEe
Q 006152 545 TACVAMVAYGFHIPVLV 561 (658)
Q Consensus 545 T~~lAl~Ak~~~VPVyV 561 (658)
--.|+-+|++|++++++
T Consensus 197 l~~i~~la~~~~i~li~ 213 (456)
T 2ez2_A 197 MRAVRELTEAHGIKVFY 213 (456)
T ss_dssp HHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHcCCeEEE
Confidence 34567788999998876
No 377
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=22.75 E-value=1.5e+02 Score=33.11 Aligned_cols=65 Identities=28% Similarity=0.261 Sum_probs=46.9
Q ss_pred HHHHhccCCCEEEeeCChHHHHHHHHHHHH---c----C-C---------------------------eeEEEEeCCCCC
Q 006152 447 HAVTKIRDGDVLLTYGSSSAVEMILQHAHE---L----G-K---------------------------QFRVVIVDSRPK 491 (658)
Q Consensus 447 ~a~~~I~dgdvILT~g~SsaV~~vL~~A~e---~----g-k---------------------------~f~ViV~ESRP~ 491 (658)
....+.++|-++.||+....|+..|..|-- . + + .+.|+|+-+-
T Consensus 204 ~l~~~~~~g~~~~t~~~~~~vr~~L~~aGf~v~~~~~~g~krem~~~~~~~~~~~~~~~~~~~~~~~~~~DVvIIGgG-- 281 (676)
T 3ps9_A 204 AMARLARPGGTLATFTSAGFVRRGLQDAGFTMQKRKGFGRKREMLCGVMEQTLPLPCSAPWFNRTGSSKREAAIIGGG-- 281 (676)
T ss_dssp HHHHHEEEEEEEEESCCCHHHHHHHHHHTCEEEEEECSTTCCEEEEEECCSCCCCCCSCGGGCCCCCSCCEEEEECCS--
T ss_pred HHHHHhCCCCEEEeccCcHHHHHHHHhCCeEEEeccccccchhhhheeccccccccccCCcccCccCCCCCEEEECCC--
Confidence 334577889999999999999888877630 0 0 0 1455555543
Q ss_pred chHHHHHHHHHhCCCcEEEEcc
Q 006152 492 HEGKLLLRRLVRKGLSCTYTHI 513 (658)
Q Consensus 492 ~EG~~La~eL~~~GI~vT~I~D 513 (658)
.-|.-.|..|.+.|++|+++--
T Consensus 282 iaGlsaA~~La~~G~~V~vlEk 303 (676)
T 3ps9_A 282 IASALLSLALLRRGWQVTLYCA 303 (676)
T ss_dssp HHHHHHHHHHHTTTCEEEEEES
T ss_pred HHHHHHHHHHHHCCCeEEEEeC
Confidence 3577888999999999999963
No 378
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=22.72 E-value=1.7e+02 Score=29.17 Aligned_cols=100 Identities=17% Similarity=0.165 Sum_probs=56.4
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcch----------HHHHHhh-hc
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHIN----------AISYIIH-EV 523 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~Ds----------Av~~~M~-~V 523 (658)
..+++|.|.+.++..++..+.+.| -+|++.+ |.+.+.. ..+...|..+..+... .+-..+. ++
T Consensus 82 ~~v~~~~g~~~a~~~~~~~l~~~g--d~Vl~~~--~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 155 (375)
T 3op7_A 82 EQILQTNGATGANLLVLYSLIEPG--DHVISLY--PTYQQLY--DIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTT 155 (375)
T ss_dssp GGEEEESHHHHHHHHHHHHHCCTT--CEEEEEE--SSCTHHH--HHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTC
T ss_pred hhEEEcCChHHHHHHHHHHhcCCC--CEEEEeC--CCchhHH--HHHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCC
Confidence 467777777777766666554333 3455543 5555533 3345678777666421 2222332 45
Q ss_pred cEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 524 TRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 524 d~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
..|++- .--...|.++..----.|+-+|+.|++.+++
T Consensus 156 ~~v~~~-~~~nptG~~~~~~~l~~i~~la~~~~~~li~ 192 (375)
T 3op7_A 156 KMICIN-NANNPTGAVMDRTYLEELVEIASEVGAYILS 192 (375)
T ss_dssp CEEEEE-SSCTTTCCCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred eEEEEc-CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 555542 1223345555444455677789999998876
No 379
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=22.65 E-value=3.1e+02 Score=26.82 Aligned_cols=76 Identities=11% Similarity=0.135 Sum_probs=49.0
Q ss_pred CCCEEEeeCChHHHHHHHH-HHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEc-c----hHHHHHhh------
Q 006152 454 DGDVLLTYGSSSAVEMILQ-HAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTH-I----NAISYIIH------ 521 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~-~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~-D----sAv~~~M~------ 521 (658)
.|.++|..|-++-+...|. .+.++| .+|++++.|.......+..+|...|..+.++. | ..+..++.
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAASG--FDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF 105 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCC--CeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4678888887766554443 344444 57888876655555667788888888877663 3 33444444
Q ss_pred -hccEEEEcce
Q 006152 522 -EVTRVFLGAS 531 (658)
Q Consensus 522 -~Vd~VlvGAd 531 (658)
.+|.+|--|-
T Consensus 106 g~iD~lvnnAg 116 (280)
T 4da9_A 106 GRIDCLVNNAG 116 (280)
T ss_dssp SCCCEEEEECC
T ss_pred CCCCEEEECCC
Confidence 5788887663
No 380
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=22.64 E-value=1.3e+02 Score=29.63 Aligned_cols=77 Identities=17% Similarity=0.171 Sum_probs=52.1
Q ss_pred HHHhccCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHH-HHHHhCCCc--EEEEcchHHHHHhh--h
Q 006152 448 AVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLL-RRLVRKGLS--CTYTHINAISYIIH--E 522 (658)
Q Consensus 448 a~~~I~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La-~eL~~~GI~--vT~I~DsAv~~~M~--~ 522 (658)
..+++..|++||=.|+++-...+ .+...+..-+|+.+|-.|. -.+++ ..+...|+. ++++.-+....+-. .
T Consensus 9 l~~~v~~g~~VlDIGtGsG~l~i--~la~~~~~~~V~avDi~~~--al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~ 84 (225)
T 3kr9_A 9 VASFVSQGAILLDVGSDHAYLPI--ELVERGQIKSAIAGEVVEG--PYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQ 84 (225)
T ss_dssp HHTTSCTTEEEEEETCSTTHHHH--HHHHTTSEEEEEEEESSHH--HHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGC
T ss_pred HHHhCCCCCEEEEeCCCcHHHHH--HHHHhCCCCEEEEEECCHH--HHHHHHHHHHHcCCCceEEEEECchhhhcccCcC
Confidence 45688999999999999865343 2334577789999997653 23455 567788884 77776555433332 4
Q ss_pred ccEEEE
Q 006152 523 VTRVFL 528 (658)
Q Consensus 523 Vd~Vlv 528 (658)
+|.|++
T Consensus 85 ~D~Ivi 90 (225)
T 3kr9_A 85 VSVITI 90 (225)
T ss_dssp CCEEEE
T ss_pred CCEEEE
Confidence 887775
No 381
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=22.52 E-value=2.5e+02 Score=27.17 Aligned_cols=82 Identities=13% Similarity=0.193 Sum_probs=51.9
Q ss_pred HHhcc-CCCEEEeeCChHH-------HHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEE-cchHHHHH
Q 006152 449 VTKIR-DGDVLLTYGSSSA-------VEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYT-HINAISYI 519 (658)
Q Consensus 449 ~~~I~-dgdvILT~g~Ssa-------V~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I-~DsAv~~~ 519 (658)
+.++. ...+|++-||+-+ |..+...+.++|+..+.-+=--.=+.-|+ |=-.|.+++||...+ -.-.+---
T Consensus 17 a~~l~~A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPVAGRMPGh-mNVLLAEA~VPYd~v~EMdeIN~d 95 (180)
T 1pno_A 17 AFIMKNASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPVAGRMPGH-MNVLLAEANVPYDEVFELEEINSS 95 (180)
T ss_dssp HHHHHTCSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTTCTTSTTH-HHHHHHHTTCCGGGEEEHHHHGGG
T ss_pred HHHHHhCCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccccccCCCc-ceEEEEeeCCCHHHHhhHHHHhhh
Confidence 33443 4578999999843 44555555667887776553222233443 446788999998744 34456666
Q ss_pred hhhccEEEE-cce
Q 006152 520 IHEVTRVFL-GAS 531 (658)
Q Consensus 520 M~~Vd~Vlv-GAd 531 (658)
|.++|.||+ ||.
T Consensus 96 f~~tDv~lVIGAN 108 (180)
T 1pno_A 96 FQTADVAFVIGAN 108 (180)
T ss_dssp GGGCSEEEEESCC
T ss_pred hhhcCEEEEeccc
Confidence 778999875 764
No 382
>3j20_M 30S ribosomal protein S11P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=22.22 E-value=1.5e+02 Score=27.49 Aligned_cols=49 Identities=22% Similarity=0.187 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHcCCe-eEEEEeC-----CCCCchHHHHH-HHHHhCCCcEEEEcch
Q 006152 466 AVEMILQHAHELGKQ-FRVVIVD-----SRPKHEGKLLL-RRLVRKGLSCTYTHIN 514 (658)
Q Consensus 466 aV~~vL~~A~e~gk~-f~ViV~E-----SRP~~EG~~La-~eL~~~GI~vT~I~Ds 514 (658)
+.+.+.+.|.+.|.+ ++|+|-- ++....|++.+ +.|...|+.+..|.|.
T Consensus 63 aa~~~~~~a~e~Gi~~v~V~vkG~gg~~~~~pG~GresairaL~~~Gl~I~~I~Dv 118 (137)
T 3j20_M 63 AARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDV 118 (137)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEECCCSSSCCSCCTHHHHHHHHHHHHTCEEEEEEEC
T ss_pred HHHHHHHHHHHcCCeEEEEEEECCCCCCCcCCCCcHHHHHHHHHhCCCEEEEEEEc
Confidence 455677778887854 5666643 22346788887 8999999999999884
No 383
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=22.17 E-value=2.8e+02 Score=26.15 Aligned_cols=99 Identities=14% Similarity=0.102 Sum_probs=60.4
Q ss_pred CCCEEEeeCChHHHHHHHH-HHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEc-c----hHHHHHhhh-----
Q 006152 454 DGDVLLTYGSSSAVEMILQ-HAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTH-I----NAISYIIHE----- 522 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~-~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~-D----sAv~~~M~~----- 522 (658)
.|.+||..|-++-+...|. ...++| .+|+++..|......++..+|.+.|-.+.++. | ..+-.++.+
T Consensus 6 ~~k~vlITGas~gIG~~~a~~l~~~G--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (255)
T 3icc_A 6 KGKVALVTGASRGIGRAIAKRLANDG--ALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL 83 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTT--CEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC--CeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence 4677888877765544443 344444 57888777777777788888988887776652 2 223333321
Q ss_pred --------ccEEEEcceeEecCCCe-------------ecccchHHHHHHHhhC
Q 006152 523 --------VTRVFLGASSVLSNGTV-------------CSRVGTACVAMVAYGF 555 (658)
Q Consensus 523 --------Vd~VlvGAdaV~aNG~V-------------vNKiGT~~lAl~Ak~~ 555 (658)
+|.||-.|- +...+.+ +|-.|++.+.-.+..+
T Consensus 84 ~~~~~~~~id~lv~nAg-~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 136 (255)
T 3icc_A 84 QNRTGSTKFDILINNAG-IGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSR 136 (255)
T ss_dssp HHHHSSSCEEEEEECCC-CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTT
T ss_pred cccccCCcccEEEECCC-CCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHh
Confidence 888887664 2222221 4666777666655443
No 384
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=22.07 E-value=87 Score=30.50 Aligned_cols=26 Identities=8% Similarity=0.070 Sum_probs=20.8
Q ss_pred cccchHHHHHHHhhCCCCeEeecccc
Q 006152 541 SRVGTACVAMVAYGFHIPVLVCCEAY 566 (658)
Q Consensus 541 NKiGT~~lAl~Ak~~~VPVyV~aety 566 (658)
|-.||..+.-+|+.++++-+|.+.+.
T Consensus 95 n~~~~~~ll~a~~~~~v~~~v~~SS~ 120 (321)
T 3vps_A 95 NVDSGRHLLALCTSVGVPKVVVGSTC 120 (321)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEEG
T ss_pred HHHHHHHHHHHHHHcCCCeEEEecCH
Confidence 67799999999999998777765543
No 385
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=21.98 E-value=3.8e+02 Score=23.06 Aligned_cols=37 Identities=19% Similarity=0.214 Sum_probs=24.9
Q ss_pred hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEee
Q 006152 522 EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVC 562 (658)
Q Consensus 522 ~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~ 562 (658)
++|.|++|+..--.-+ --.|+-.-.+ .++-.+||+|+
T Consensus 119 ~~DlIV~G~~g~~~~~---~~~Gs~~~~v-l~~a~~PVlvV 155 (156)
T 3fg9_A 119 KPDLLVTGADTEFPHS---KIAGAIGPRL-ARKAPISVIVV 155 (156)
T ss_dssp CCSEEEEETTCCCTTS---SSCSCHHHHH-HHHCSSEEEEE
T ss_pred CCCEEEECCCCCCccc---eeecchHHHH-HHhCCCCEEEe
Confidence 5799999998632221 2467655444 56678999986
No 386
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=21.98 E-value=5.7e+02 Score=25.03 Aligned_cols=100 Identities=11% Similarity=0.130 Sum_probs=60.0
Q ss_pred CCCEEEeeCChHHHHHHHH-HHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEE-cc----hHHHHHhh------
Q 006152 454 DGDVLLTYGSSSAVEMILQ-HAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYT-HI----NAISYIIH------ 521 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~-~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I-~D----sAv~~~M~------ 521 (658)
.|.+||..|-++-+...|. .+.++| .+|++++-+.......+...+.+.|..+.++ +| ..+..++.
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEG--ANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC--CEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3678888888766654443 344455 5677776554433344456677788888766 33 23334443
Q ss_pred -hccEEEEcceeEecCCCe-------------ecccchHHHHHHHhhC
Q 006152 522 -EVTRVFLGASSVLSNGTV-------------CSRVGTACVAMVAYGF 555 (658)
Q Consensus 522 -~Vd~VlvGAdaV~aNG~V-------------vNKiGT~~lAl~Ak~~ 555 (658)
++|.+|--|-.....+.+ +|-.|++.++-.+..+
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 171 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSH 171 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTT
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 578888766433333321 3667888888777654
No 387
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=21.95 E-value=2.3e+02 Score=23.74 Aligned_cols=80 Identities=21% Similarity=0.384 Sum_probs=44.7
Q ss_pred CeeEEEEeCCCCCchHHHHHHHHHhCCCcE--EEEcchHHH-HHhh--hccEEEEcceeEecCCCeecccchHHHHHHHh
Q 006152 479 KQFRVVIVDSRPKHEGKLLLRRLVRKGLSC--TYTHINAIS-YIIH--EVTRVFLGASSVLSNGTVCSRVGTACVAMVAY 553 (658)
Q Consensus 479 k~f~ViV~ESRP~~EG~~La~eL~~~GI~v--T~I~DsAv~-~~M~--~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak 553 (658)
+..+|+|+|..+.. ...+...|.+.|..+ ....+..-+ ..+. ..|.||+..+- .+ .-|.-.+..+-+
T Consensus 4 ~~~~ILivdd~~~~-~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l--~~-----~~g~~~~~~lr~ 75 (144)
T 3kht_A 4 RSKRVLVVEDNPDD-IALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGL--PI-----ANGFEVMSAVRK 75 (144)
T ss_dssp -CEEEEEECCCHHH-HHHHHHHHHHTTCCEEEEEESSHHHHHHHHTTCCCSEEEECTTC--GG-----GCHHHHHHHHHS
T ss_pred CCCEEEEEeCCHHH-HHHHHHHHHhcCCCeeEEEECCHHHHHHHhhcCCCCEEEEeCCC--CC-----CCHHHHHHHHHh
Confidence 35688888876543 233457788888873 333332222 1222 57888886542 22 224334444443
Q ss_pred ---hCCCCeEeecccc
Q 006152 554 ---GFHIPVLVCCEAY 566 (658)
Q Consensus 554 ---~~~VPVyV~aety 566 (658)
..++|+++++...
T Consensus 76 ~~~~~~~pii~~s~~~ 91 (144)
T 3kht_A 76 PGANQHTPIVILTDNV 91 (144)
T ss_dssp SSTTTTCCEEEEETTC
T ss_pred cccccCCCEEEEeCCC
Confidence 3579999988653
No 388
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=21.87 E-value=3.4e+02 Score=22.43 Aligned_cols=82 Identities=9% Similarity=-0.038 Sum_probs=48.2
Q ss_pred cCCeeEEEEeCCCCCchHHHHHHHHHhCCC--cEEEEcchH--HHHHh------hhccEEEEcceeEecCCCeecccchH
Q 006152 477 LGKQFRVVIVDSRPKHEGKLLLRRLVRKGL--SCTYTHINA--ISYII------HEVTRVFLGASSVLSNGTVCSRVGTA 546 (658)
Q Consensus 477 ~gk~f~ViV~ESRP~~EG~~La~eL~~~GI--~vT~I~DsA--v~~~M------~~Vd~VlvGAdaV~aNG~VvNKiGT~ 546 (658)
..+..+|+|+|..+.. ...+...|...|. .|....+.. +..+- ...|.||+..+ +.++ -|--
T Consensus 6 ~~~~~~iLivdd~~~~-~~~l~~~l~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~--l~~~-----~g~~ 77 (146)
T 3ilh_A 6 TRKIDSVLLIDDDDIV-NFLNTTIIRMTHRVEEIQSVTSGNAAINKLNELYAAGRWPSIICIDIN--MPGI-----NGWE 77 (146)
T ss_dssp -CCEEEEEEECSCHHH-HHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHTSSCCCSEEEEESS--CSSS-----CHHH
T ss_pred cCccceEEEEeCCHHH-HHHHHHHHHhcCCCeeeeecCCHHHHHHHHHHhhccCCCCCEEEEcCC--CCCC-----CHHH
Confidence 3567889998887643 2334567788887 666655432 22222 23799988654 2222 2333
Q ss_pred HHHHHHh-----hCCCCeEeecccc
Q 006152 547 CVAMVAY-----GFHIPVLVCCEAY 566 (658)
Q Consensus 547 ~lAl~Ak-----~~~VPVyV~aety 566 (658)
.+..+-+ ...+|+++++...
T Consensus 78 ~~~~l~~~~~~~~~~~~ii~~t~~~ 102 (146)
T 3ilh_A 78 LIDLFKQHFQPMKNKSIVCLLSSSL 102 (146)
T ss_dssp HHHHHHHHCGGGTTTCEEEEECSSC
T ss_pred HHHHHHHhhhhccCCCeEEEEeCCC
Confidence 4444444 3579999887654
No 389
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=21.79 E-value=7e+02 Score=26.69 Aligned_cols=101 Identities=12% Similarity=0.123 Sum_probs=55.7
Q ss_pred CCEEEeeCChHHHHHHHHHHHH--------cC----CeeEEEEeCCCCCchHHHHHHHHHhCCC---cEEEEcc------
Q 006152 455 GDVLLTYGSSSAVEMILQHAHE--------LG----KQFRVVIVDSRPKHEGKLLLRRLVRKGL---SCTYTHI------ 513 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e--------~g----k~f~ViV~ESRP~~EG~~La~eL~~~GI---~vT~I~D------ 513 (658)
+..|+|-|.+.++...|..+.+ .| .+..||+.+.- +-. +.+.+.-.|+ .+..+..
T Consensus 155 ~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~--H~s--~~~~~~~~g~g~~~~~~v~~d~~~~~ 230 (511)
T 3vp6_A 155 GDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQS--HYS--IKKAGAALGFGTDNVILIKCNERGKI 230 (511)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTS--CTH--HHHHHHHTTSCGGGEEEECBCTTSCB
T ss_pred CceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCc--hHH--HHHHHHHcCCCCCcEEEeecCCCCcc
Confidence 4567777766665555554433 23 45677776532 222 2233344555 7887752
Q ss_pred --hHHHHHhhhc------cEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEee
Q 006152 514 --NAISYIIHEV------TRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVC 562 (658)
Q Consensus 514 --sAv~~~M~~V------d~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~ 562 (658)
..+-..+.+- .++|+....-...|.+ ..+ -.|+-+|++|++.++|=
T Consensus 231 d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~v-d~l--~~I~~ia~~~~~~lhvD 284 (511)
T 3vp6_A 231 IPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF-DPI--QEIADICEKYNLWLHVD 284 (511)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCB-CCH--HHHHHHHHHHTCEEEEE
T ss_pred CHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccc-ccH--HHHHHHHHHcCCEEEEE
Confidence 2344444432 4455444333344544 333 55788899999998873
No 390
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=21.75 E-value=76 Score=27.00 Aligned_cols=81 Identities=10% Similarity=0.036 Sum_probs=47.4
Q ss_pred CCeeEEEEeCCCCCchHHHHHHHHHhCC-CcEEEEcchH-HH-HHh---hhccEEEEcceeEecCCCeecccchHHHHHH
Q 006152 478 GKQFRVVIVDSRPKHEGKLLLRRLVRKG-LSCTYTHINA-IS-YII---HEVTRVFLGASSVLSNGTVCSRVGTACVAMV 551 (658)
Q Consensus 478 gk~f~ViV~ESRP~~EG~~La~eL~~~G-I~vT~I~DsA-v~-~~M---~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~ 551 (658)
....+|+|+|..+.. ...+...|.+.| +.|....+.. .. .+. ...|.||+..+- .+ .-|.-.+..+
T Consensus 18 ~~~~~ilivdd~~~~-~~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~dlvi~D~~l--~~-----~~g~~~~~~l 89 (146)
T 4dad_A 18 QGMINILVASEDASR-LAHLARLVGDAGRYRVTRTVGRAAQIVQRTDGLDAFDILMIDGAA--LD-----TAELAAIEKL 89 (146)
T ss_dssp GGGCEEEEECSCHHH-HHHHHHHHHHHCSCEEEEECCCHHHHTTCHHHHTTCSEEEEECTT--CC-----HHHHHHHHHH
T ss_pred CCCCeEEEEeCCHHH-HHHHHHHHhhCCCeEEEEeCCHHHHHHHHHhcCCCCCEEEEeCCC--CC-----ccHHHHHHHH
Confidence 345788888876643 233456777778 8887776654 22 222 357888886542 22 2233333333
Q ss_pred Hhh-CCCCeEeecccc
Q 006152 552 AYG-FHIPVLVCCEAY 566 (658)
Q Consensus 552 Ak~-~~VPVyV~aety 566 (658)
-+. .++||++++...
T Consensus 90 ~~~~~~~~ii~lt~~~ 105 (146)
T 4dad_A 90 SRLHPGLTCLLVTTDA 105 (146)
T ss_dssp HHHCTTCEEEEEESCC
T ss_pred HHhCCCCcEEEEeCCC
Confidence 333 479999987643
No 391
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=21.73 E-value=1.8e+02 Score=28.48 Aligned_cols=96 Identities=13% Similarity=0.068 Sum_probs=50.4
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchH--------HHHHhhhccEEE
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINA--------ISYIIHEVTRVF 527 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsA--------v~~~M~~Vd~Vl 527 (658)
.+++|.|.+.++..++.... .. +|++++.-.+ +..+...+...|+.+.++.... +- +-+++..|+
T Consensus 63 ~v~~~~g~t~al~~~~~~l~---~~-~~i~~~~~~~--~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~-~~~~~~~v~ 135 (362)
T 3ffr_A 63 EVLFLASATEIWERIIQNCV---EK-KSFHCVNGSF--SKRFYEFAGELGREAYKEEAAFGKGFYPADIT-VPADAEIIC 135 (362)
T ss_dssp EEEEESCHHHHHHHHHHHHC---SS-EEEEEECSHH--HHHHHHHHHHTTCEEEEEECCTTCCCCGGGCC-CCTTCCEEE
T ss_pred EEEEeCCchHHHHHHHHhcc---CC-cEEEEcCcHH--HHHHHHHHHHhCCCeEEEecCCCCCCCHHHHh-ccCCccEEE
Confidence 45666555556655444432 22 7666654333 2334445667799888875321 11 112344444
Q ss_pred EcceeEecCCCeecccchHHHHHHHhhC-CCCeEee
Q 006152 528 LGASSVLSNGTVCSRVGTACVAMVAYGF-HIPVLVC 562 (658)
Q Consensus 528 vGAdaV~aNG~VvNKiGT~~lAl~Ak~~-~VPVyV~ 562 (658)
+- .-=...|.+.. --.|+-+|++| ++.|+|=
T Consensus 136 ~~-~~~nptG~~~~---l~~i~~la~~~p~~~li~D 167 (362)
T 3ffr_A 136 LT-HNETSSGVSMP---VEDINTFRDKNKDALIFVD 167 (362)
T ss_dssp EE-SEETTTTEECC---HHHHTTSGGGSTTSEEEEE
T ss_pred EE-cCCCCcceeCC---HHHHHHHHHhCCCCEEEEe
Confidence 43 22123354443 23466689999 9988763
No 392
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=21.71 E-value=2.3e+02 Score=30.72 Aligned_cols=89 Identities=17% Similarity=0.187 Sum_probs=52.3
Q ss_pred CCCEEEeeCChHH-HHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEccee
Q 006152 454 DGDVLLTYGSSSA-VEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASS 532 (658)
Q Consensus 454 dgdvILT~g~Ssa-V~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~VlvGAda 532 (658)
+...|+.+|-+-+ +-.+-+.++++| ++|.+.|.++. .++.+|.+.||++.+-.+.. .+..+|.||++.
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G--~~V~~~D~~~~----~~~~~l~~~gi~~~~g~~~~---~~~~~d~vV~Sp-- 89 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEG--YQISGSDLAPN----SVTQHLTALGAQIYFHHRPE---NVLDASVVVVST-- 89 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTT--CEEEEECSSCC----HHHHHHHHTTCEEESSCCGG---GGTTCSEEEECT--
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCC--CeEEEEECCCC----HHHHHHHHCCCEEECCCCHH---HcCCCCEEEECC--
Confidence 4567888865422 111223344444 68888898754 34567999999886544432 245688886653
Q ss_pred EecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 533 VLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 533 V~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
| + .. +...-..|++.++||+=
T Consensus 90 ----g-i-~~--~~p~~~~a~~~gi~v~~ 110 (494)
T 4hv4_A 90 ----A-I-SA--DNPEIVAAREARIPVIR 110 (494)
T ss_dssp ----T-S-CT--TCHHHHHHHHTTCCEEE
T ss_pred ----C-C-CC--CCHHHHHHHHCCCCEEc
Confidence 2 1 11 23455567788888774
No 393
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=21.67 E-value=3.8e+02 Score=25.67 Aligned_cols=100 Identities=12% Similarity=0.071 Sum_probs=61.7
Q ss_pred CCCEEEeeCChHHHHHHHH-HHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEE-cc----hHHHHHhh------
Q 006152 454 DGDVLLTYGSSSAVEMILQ-HAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYT-HI----NAISYIIH------ 521 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~-~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I-~D----sAv~~~M~------ 521 (658)
.|.+||..|-++-+...|. .+.++| .+|+++..|.......+..+|.+.|-.+.++ +| ..+..++.
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEG--ANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC--CEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 4678888887766654443 344444 5788876666555666678888888776655 33 33444444
Q ss_pred -hccEEEEcceeEecCCC-------------eecccchHHHHHHHhhC
Q 006152 522 -EVTRVFLGASSVLSNGT-------------VCSRVGTACVAMVAYGF 555 (658)
Q Consensus 522 -~Vd~VlvGAdaV~aNG~-------------VvNKiGT~~lAl~Ak~~ 555 (658)
++|.+|--|-.....+. -+|-.|++.++-.+..+
T Consensus 85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 132 (259)
T 3edm_A 85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPK 132 (259)
T ss_dssp CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57888776643322232 24777888887776655
No 394
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=21.46 E-value=1.3e+02 Score=31.96 Aligned_cols=69 Identities=17% Similarity=0.192 Sum_probs=42.7
Q ss_pred CCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHH-HHhCCC--cEEEEcchHHHHHhh-hccEEEE
Q 006152 454 DGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRR-LVRKGL--SCTYTHINAISYIIH-EVTRVFL 528 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~e-L~~~GI--~vT~I~DsAv~~~M~-~Vd~Vlv 528 (658)
.|.+||=.|+++-+..+ . |.+.|.+ +||.+|..|. ...+++ +...|+ .+++|.-.+--.-++ ++|.||-
T Consensus 83 ~~k~VLDvG~GtGiLs~-~-Aa~aGA~-~V~ave~s~~---~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~Dvivs 155 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSI-F-CAQAGAR-RVYAVEASAI---WQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVS 155 (376)
T ss_dssp TTCEEEEETCTTSHHHH-H-HHHTTCS-EEEEEECSTT---HHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEEC
T ss_pred CCCEEEEeCCCccHHHH-H-HHHhCCC-EEEEEeChHH---HHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEe
Confidence 57899999999865443 2 3445543 8999998774 355644 445665 378876543222233 5666653
No 395
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=21.45 E-value=1.4e+02 Score=29.95 Aligned_cols=77 Identities=12% Similarity=0.084 Sum_probs=52.6
Q ss_pred HHHhccCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHH-HHHHhCCCc--EEEEcchHHHHHhh--h
Q 006152 448 AVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLL-RRLVRKGLS--CTYTHINAISYIIH--E 522 (658)
Q Consensus 448 a~~~I~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La-~eL~~~GI~--vT~I~DsAv~~~M~--~ 522 (658)
..++|..|++||=.|+++....+. +.+.+..-+|+.+|-.|.. .+.| +.+...|+. ++++.-+....+-. .
T Consensus 15 i~~~v~~g~~VlDIGtGsG~l~i~--la~~~~~~~V~avDi~~~a--l~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~ 90 (244)
T 3gnl_A 15 VASYITKNERIADIGSDHAYLPCF--AVKNQTASFAIAGEVVDGP--FQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDA 90 (244)
T ss_dssp HHTTCCSSEEEEEETCSTTHHHHH--HHHTTSEEEEEEEESSHHH--HHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGC
T ss_pred HHHhCCCCCEEEEECCccHHHHHH--HHHhCCCCEEEEEECCHHH--HHHHHHHHHHcCCCceEEEEecchhhccCcccc
Confidence 456889999999999998764432 3345777799999976532 3445 567778883 77777665554443 3
Q ss_pred ccEEEE
Q 006152 523 VTRVFL 528 (658)
Q Consensus 523 Vd~Vlv 528 (658)
+|.|++
T Consensus 91 ~D~Ivi 96 (244)
T 3gnl_A 91 IDTIVI 96 (244)
T ss_dssp CCEEEE
T ss_pred ccEEEE
Confidence 888775
No 396
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=21.29 E-value=6.8e+02 Score=25.94 Aligned_cols=70 Identities=14% Similarity=0.057 Sum_probs=40.0
Q ss_pred cCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc---hHHHHHhhhccEEEEcceeEecCCCeecccchHHHHHHHh
Q 006152 477 LGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI---NAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAY 553 (658)
Q Consensus 477 ~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D---sAv~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak 553 (658)
+...+++++.-. |...-++.++++....-.+.++.- .-+.++|..+|+|+..+ |+.+ +=|-
T Consensus 254 ~~~~~~~v~~~~-~~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~vv~~S-------------Gg~~--~EA~ 317 (403)
T 3ot5_A 254 SREDTELVYPMH-LNPAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYLVFTDS-------------GGVQ--EEAP 317 (403)
T ss_dssp HCTTEEEEEECC-SCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEEEEECC-------------HHHH--HHGG
T ss_pred hCCCceEEEecC-CCHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCEEEECC-------------ccHH--HHHH
Confidence 445567666421 221223334433222224555531 26788999999876332 5544 6778
Q ss_pred hCCCCeEee
Q 006152 554 GFHIPVLVC 562 (658)
Q Consensus 554 ~~~VPVyV~ 562 (658)
.+|+|+++.
T Consensus 318 a~g~PvV~~ 326 (403)
T 3ot5_A 318 GMGVPVLVL 326 (403)
T ss_dssp GTTCCEEEC
T ss_pred HhCCCEEEe
Confidence 899999986
No 397
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=21.28 E-value=1.9e+02 Score=24.80 Aligned_cols=80 Identities=14% Similarity=0.079 Sum_probs=45.2
Q ss_pred CeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHH-Hhh--hccEEEEcceeEecCCCeecccchHHHHHHHh-h
Q 006152 479 KQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISY-IIH--EVTRVFLGASSVLSNGTVCSRVGTACVAMVAY-G 554 (658)
Q Consensus 479 k~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~-~M~--~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak-~ 554 (658)
...+|+|+|..+.. ...+...|.+.|+.|....+..-+. .+. ..|.||+..+- .+ .-|.-.+..+-+ .
T Consensus 13 ~~~~ILivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~D~~l--~~-----~~g~~~~~~l~~~~ 84 (153)
T 3hv2_A 13 RRPEILLVDSQEVI-LQRLQQLLSPLPYTLHFARDATQALQLLASREVDLVISAAHL--PQ-----MDGPTLLARIHQQY 84 (153)
T ss_dssp SCCEEEEECSCHHH-HHHHHHHHTTSSCEEEEESSHHHHHHHHHHSCCSEEEEESCC--SS-----SCHHHHHHHHHHHC
T ss_pred CCceEEEECCCHHH-HHHHHHHhcccCcEEEEECCHHHHHHHHHcCCCCEEEEeCCC--Cc-----CcHHHHHHHHHhHC
Confidence 45677777776543 2334466777787777655432222 222 57888886542 22 223333333333 3
Q ss_pred CCCCeEeecccc
Q 006152 555 FHIPVLVCCEAY 566 (658)
Q Consensus 555 ~~VPVyV~aety 566 (658)
.++|+++++...
T Consensus 85 ~~~~ii~~s~~~ 96 (153)
T 3hv2_A 85 PSTTRILLTGDP 96 (153)
T ss_dssp TTSEEEEECCCC
T ss_pred CCCeEEEEECCC
Confidence 579999987754
No 398
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=21.25 E-value=2.6e+02 Score=27.43 Aligned_cols=103 Identities=11% Similarity=0.120 Sum_probs=56.5
Q ss_pred CEEEeeCChHHHHHHH-HHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEc--c-hHHHHHhhhccEEEEcce
Q 006152 456 DVLLTYGSSSAVEMIL-QHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTH--I-NAISYIIHEVTRVFLGAS 531 (658)
Q Consensus 456 dvILT~g~SsaV~~vL-~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~--D-sAv~~~M~~Vd~VlvGAd 531 (658)
.+||..|-+.-+..-| +.+.++| .+|+++.-++... ..|.+.++.+.... | ..+..++..+|.||--|-
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~-----~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~ 86 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAG--HDLVLIHRPSSQI-----QRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAG 86 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT--CEEEEEECTTSCG-----GGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CEEEEEecChHhh-----hhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 4788888765544333 4445555 5677765444321 12333465443221 1 356667778888886553
Q ss_pred eEecC-CC-----eecccchHHHHHHHhhCCCCeEeeccc
Q 006152 532 SVLSN-GT-----VCSRVGTACVAMVAYGFHIPVLVCCEA 565 (658)
Q Consensus 532 aV~aN-G~-----VvNKiGT~~lAl~Ak~~~VPVyV~aet 565 (658)
..-.. .+ -+|-.||..+.-+|+.+++.-+|.+.+
T Consensus 87 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 126 (342)
T 2x4g_A 87 YYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126 (342)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred cCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 22110 01 146778999999999888765555444
No 399
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=21.20 E-value=1.5e+02 Score=29.00 Aligned_cols=100 Identities=9% Similarity=-0.039 Sum_probs=49.2
Q ss_pred CEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhC--CCcEEEEcch-------HHHH-Hhhh---
Q 006152 456 DVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRK--GLSCTYTHIN-------AISY-IIHE--- 522 (658)
Q Consensus 456 dvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~--GI~vT~I~Ds-------Av~~-~M~~--- 522 (658)
.+++|-|.+.++..+|+.+.+ ..-+|++. .|.+-+...+..+... |+.+..+... .+-. .+.+
T Consensus 61 ~v~~~~~gt~a~~~al~~~~~--~gd~vi~~--~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~~i~~~~~ 136 (356)
T 1v72_A 61 EVFLVPTGTAANALCLSAMTP--PWGNIYCH--PASHINNDECGAPEFFSNGAKLMTVDGPAAKLDIVRLRERTREKVGD 136 (356)
T ss_dssp EEEEESCHHHHHHHHHHTSCC--TTEEEEEC--TTSHHHHSSTTHHHHHTTSCEEEECCCGGGCCCHHHHHHHTTSSTTC
T ss_pred cEEEeCCccHHHHHHHHHhcC--CCCEEEEc--CccchhhhhchHHHHHhCCcEEEEecCCCCeEcHHHHHHHhhhcchh
Confidence 367777777777665555432 33455553 3443321111113334 8777766432 2222 3321
Q ss_pred -----ccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEe
Q 006152 523 -----VTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLV 561 (658)
Q Consensus 523 -----Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV 561 (658)
+..|++-. ....|.++..-=--.|+-+|++|++.+++
T Consensus 137 ~~~~~~~~v~~~~--~~~tG~~~~~~~l~~i~~~~~~~~~~li~ 178 (356)
T 1v72_A 137 VHTTQPACVSITQ--ATEVGSIYTLDEIEAIGDVCKSSSLGLHM 178 (356)
T ss_dssp TTSCEEEEEEEES--SCTTSCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred hccCCceEEEEEc--CCCCCccCCHHHHHHHHHHHHHcCCeEEE
Confidence 23333322 12234333332224567789999998876
No 400
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=21.20 E-value=78 Score=31.29 Aligned_cols=12 Identities=8% Similarity=0.246 Sum_probs=7.1
Q ss_pred hhccEEEEccee
Q 006152 521 HEVTRVFLGASS 532 (658)
Q Consensus 521 ~~Vd~VlvGAda 532 (658)
.++|.||.+.+.
T Consensus 54 ~~~D~v~~~~~~ 65 (307)
T 3r5x_A 54 KDIDFALLALHG 65 (307)
T ss_dssp TTCSEEEECCCS
T ss_pred cCCCEEEEeCCC
Confidence 356666666544
No 401
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=21.16 E-value=3.9e+02 Score=24.92 Aligned_cols=76 Identities=13% Similarity=0.163 Sum_probs=45.8
Q ss_pred CCCEEEeeCChHHHHHHH-HHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEE-cc----hHHHHHhh------
Q 006152 454 DGDVLLTYGSSSAVEMIL-QHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYT-HI----NAISYIIH------ 521 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL-~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I-~D----sAv~~~M~------ 521 (658)
.|.+||..|-+.-+...| +.+.++| .+|+++.-++......+..+|...|..+.++ +| ..+..++.
T Consensus 6 ~~k~vlVTGasggiG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (258)
T 3afn_B 6 KGKRVLITGSSQGIGLATARLFARAG--AKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF 83 (258)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTT--CEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC--CEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 356788887776554444 3444445 5677776552334456667787777776665 33 33444554
Q ss_pred -hccEEEEcce
Q 006152 522 -EVTRVFLGAS 531 (658)
Q Consensus 522 -~Vd~VlvGAd 531 (658)
.+|.||--|-
T Consensus 84 g~id~vi~~Ag 94 (258)
T 3afn_B 84 GGIDVLINNAG 94 (258)
T ss_dssp SSCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 5788887654
No 402
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=21.10 E-value=3.4e+02 Score=27.99 Aligned_cols=102 Identities=14% Similarity=0.071 Sum_probs=50.6
Q ss_pred CCEEEeeCChHHHHHHHHHHHH----cCCe-eEEEEeCCCCCchHHHHHHHHHhCCCcEEEEc-----------------
Q 006152 455 GDVLLTYGSSSAVEMILQHAHE----LGKQ-FRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTH----------------- 512 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e----~gk~-f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~----------------- 512 (658)
..+++|.|.+.++..+|+.+.. .|.. ..|++. .+.+.... ..+...|..+..+.
T Consensus 92 ~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~--~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 167 (467)
T 1ax4_A 92 DYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFIS--NFHFDTTA--AHVELNGCKAINIVTEKAFDSETYDDWKGDF 167 (467)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEE--SSCCHHHH--HHHHHTTCEEEECBCGGGGCTTSCCTTTTCB
T ss_pred CcEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEe--ccccchhh--HHHhccCCceecccccccccccccCCccccc
Confidence 4677888777777777766655 5653 125554 44444322 22333455444321
Q ss_pred -chHHHHHhhh-----ccEEEEcceeEec-C-CCeecccchHHHHHHHhhCCCCeEee
Q 006152 513 -INAISYIIHE-----VTRVFLGASSVLS-N-GTVCSRVGTACVAMVAYGFHIPVLVC 562 (658)
Q Consensus 513 -DsAv~~~M~~-----Vd~VlvGAdaV~a-N-G~VvNKiGT~~lAl~Ak~~~VPVyV~ 562 (658)
...+-..+.+ +..|++- .+.. . |.++..-=--.|+-+|++|++++++=
T Consensus 168 d~~~le~~i~~~~~~~~~~vi~~--~~~np~gG~~~~~~~l~~i~~la~~~gi~li~D 223 (467)
T 1ax4_A 168 DIKKLKENIAQHGADNIVAIVST--VTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMD 223 (467)
T ss_dssp CHHHHHHHHHHHCGGGEEEEEEE--SSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHhcCCCCeeEEEEe--ccccCCCccCCChhHHHHHHHHHHHcCCEEEEE
Confidence 1233334432 3333321 1111 1 22222211235778999999998873
No 403
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=21.08 E-value=3.6e+02 Score=27.32 Aligned_cols=93 Identities=14% Similarity=-0.040 Sum_probs=48.9
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchH-HHHHHHHHhCCCcEEEEcchHHHHHh--h-hccE-EEEc
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEG-KLLLRRLVRKGLSCTYTHINAISYII--H-EVTR-VFLG 529 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG-~~La~eL~~~GI~vT~I~DsAv~~~M--~-~Vd~-VlvG 529 (658)
.++|+|-|.+.++..+|.. . .| -+|++.+ |.+.| ..+...+...|+.+..+.| ...+- . ++.. |++
T Consensus 77 ~~~~~~~ggt~a~~~~~~~-~-~g--d~Vl~~~--~~y~~~~~~~~~~~~~g~~~~~v~d--~~~l~~~~~~~~~~v~~- 147 (374)
T 2aeu_A 77 DKCVGFNRTSSAILATILA-L-KP--KKVIHYL--PELPGHPSIERSCKIVNAKYFESDK--VGEILNKIDKDTLVIIT- 147 (374)
T ss_dssp EEEEEESSHHHHHHHHHHH-H-CC--SEEEEEC--SSSSCCTHHHHHHHHTTCEEEEESC--HHHHHTTCCTTEEEEEE-
T ss_pred ceEEEEcChHHHHHHHHHh-C-CC--CEEEEec--CCCCccHHHHHHHHHcCcEEEEeCC--HHHHHhcCCCccEEEEE-
Confidence 3567776666667666654 4 44 3566654 32322 1222345567998887732 11221 1 2333 333
Q ss_pred ceeEecCCCeecccc-----hHHHHHHHhhCCCCeEeec
Q 006152 530 ASSVLSNGTVCSRVG-----TACVAMVAYGFHIPVLVCC 563 (658)
Q Consensus 530 AdaV~aNG~VvNKiG-----T~~lAl~Ak~~~VPVyV~a 563 (658)
. ..-|..| --.|+-+|++|++++++=.
T Consensus 148 -----~--~p~nptG~~~~~l~~i~~l~~~~~~~li~De 179 (374)
T 2aeu_A 148 -----G--STMDLKVIELENFKKVINTAKNKEAIVFVDD 179 (374)
T ss_dssp -----C--BCTTSCBCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred -----c--cCCCCCCCCcccHHHHHHHHHHcCCEEEEEC
Confidence 1 1234455 2345667889999887744
No 404
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=21.08 E-value=86 Score=30.05 Aligned_cols=81 Identities=15% Similarity=0.143 Sum_probs=46.2
Q ss_pred CeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEE-cceeEecCCCeecccchHHHHHHHhhCCC
Q 006152 479 KQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFL-GASSVLSNGTVCSRVGTACVAMVAYGFHI 557 (658)
Q Consensus 479 k~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M~~Vd~Vlv-GAdaV~aNG~VvNKiGT~~lAl~Ak~~~V 557 (658)
...+|.++|....+ -..+++.|.+.|+.+.++....-.--+.++|.+|| |.. .|++........+.-.+.+.++
T Consensus 12 ~~~~i~~id~~~~~-~~~~~~~l~~~G~~~~vv~~~~~~~~l~~~DglIl~GG~----p~~~~~~~~~~~l~~~~~~~~~ 86 (212)
T 2a9v_A 12 HMLKIYVVDNGGQW-THREWRVLRELGVDTKIVPNDIDSSELDGLDGLVLSGGA----PNIDEELDKLGSVGKYIDDHNY 86 (212)
T ss_dssp CCCBEEEEEESCCT-TCHHHHHHHHTTCBCCEEETTSCGGGGTTCSEEEEEEEC----SCGGGTGGGHHHHHHHHHHCCS
T ss_pred ccceEEEEeCCCcc-HHHHHHHHHHCCCEEEEEeCCCCHHHHhCCCEEEECCCC----CCCCcccccchhHHHHHHhCCC
Confidence 34567777765555 33466888888988888865321112335887777 331 2333332122222233457899
Q ss_pred CeEeecc
Q 006152 558 PVLVCCE 564 (658)
Q Consensus 558 PVyV~ae 564 (658)
|++-+|-
T Consensus 87 PiLGIC~ 93 (212)
T 2a9v_A 87 PILGICV 93 (212)
T ss_dssp CEEEETH
T ss_pred CEEEECh
Confidence 9997765
No 405
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=21.03 E-value=2.9e+02 Score=24.71 Aligned_cols=79 Identities=16% Similarity=0.162 Sum_probs=46.2
Q ss_pred eeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHH-hh--hccEEEEcceeEecCCCeecccchHHHHHHHh-hC
Q 006152 480 QFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYI-IH--EVTRVFLGASSVLSNGTVCSRVGTACVAMVAY-GF 555 (658)
Q Consensus 480 ~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~-M~--~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak-~~ 555 (658)
..+|.|+|..|.. ...+...|.+.|+.|....+..-+.- +. ..|.||+..+ +.++ -|.-.+..+-+ ..
T Consensus 7 ~~~iLivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvl~D~~--lp~~-----~g~~~~~~l~~~~~ 78 (184)
T 3rqi_A 7 DKNFLVIDDNEVF-AGTLARGLERRGYAVRQAHNKDEALKLAGAEKFEFITVXLH--LGND-----SGLSLIAPLCDLQP 78 (184)
T ss_dssp CCEEEEECSCHHH-HHHHHHHHHHTTCEEEEECSHHHHHHHHTTSCCSEEEECSE--ETTE-----ESHHHHHHHHHHCT
T ss_pred CCeEEEEcCCHHH-HHHHHHHHHHCCCEEEEeCCHHHHHHHHhhCCCCEEEEecc--CCCc-----cHHHHHHHHHhcCC
Confidence 4578888877644 22344667778888766555433322 22 5788888543 3332 24444443333 45
Q ss_pred CCCeEeecccc
Q 006152 556 HIPVLVCCEAY 566 (658)
Q Consensus 556 ~VPVyV~aety 566 (658)
++||++++...
T Consensus 79 ~~~ii~lt~~~ 89 (184)
T 3rqi_A 79 DARILVLTGYA 89 (184)
T ss_dssp TCEEEEEESSC
T ss_pred CCCEEEEeCCC
Confidence 79999987754
No 406
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=20.92 E-value=4.5e+02 Score=26.81 Aligned_cols=99 Identities=10% Similarity=0.143 Sum_probs=50.4
Q ss_pred ccCCCEEEeeCChHHHH-HHHHHHHHcC----C-------eeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc------
Q 006152 452 IRDGDVLLTYGSSSAVE-MILQHAHELG----K-------QFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI------ 513 (658)
Q Consensus 452 I~dgdvILT~g~SsaV~-~vL~~A~e~g----k-------~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D------ 513 (658)
+....+++|.|.+.++. .++..+...+ + .-+|++. .|.+.+...+ +...|+.+..+..
T Consensus 91 ~~~~~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~--~p~y~~~~~~--~~~~g~~~~~v~~~~~g~d 166 (422)
T 3d6k_A 91 LPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCP--VPGYDRHFTI--TEHFGFEMINVPMTDEGPD 166 (422)
T ss_dssp CCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEE--ESCCHHHHHH--HHHHTCEEEEEEEETTEEC
T ss_pred CChhHEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEe--CCccHHHHHH--HHHcCCEEEecCCCCCCCC
Confidence 44456888888877652 4444443322 1 2245554 3667665543 3345777766642
Q ss_pred -hHHHHHhh--hccEEEEcceeEecCCCeecccchH-------HHHHHHh-hCCCCeEe
Q 006152 514 -NAISYIIH--EVTRVFLGASSVLSNGTVCSRVGTA-------CVAMVAY-GFHIPVLV 561 (658)
Q Consensus 514 -sAv~~~M~--~Vd~VlvGAdaV~aNG~VvNKiGT~-------~lAl~Ak-~~~VPVyV 561 (658)
..+-..+. ++..|++ .-..-|..|+. .++-+|+ +|++.|++
T Consensus 167 ~~~l~~~l~~~~~~~v~~-------~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~ 218 (422)
T 3d6k_A 167 MGVVRELVKDPQVKGMWT-------VPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVW 218 (422)
T ss_dssp HHHHHHHHTSTTEEEEEE-------CCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEE
T ss_pred HHHHHHHHhcCCCeEEEE-------cCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEE
Confidence 22333333 2223321 11234455543 5666777 88886554
No 407
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=20.85 E-value=1.7e+02 Score=25.00 Aligned_cols=58 Identities=10% Similarity=0.147 Sum_probs=37.5
Q ss_pred EEEeeCChHHHHHHHHHHH----HcCCeeEEEEeCC-CCCchHHHHHHHHHh----CCCcEEEEcch
Q 006152 457 VLLTYGSSSAVEMILQHAH----ELGKQFRVVIVDS-RPKHEGKLLLRRLVR----KGLSCTYTHIN 514 (658)
Q Consensus 457 vILT~g~SsaV~~vL~~A~----e~gk~f~ViV~ES-RP~~EG~~La~eL~~----~GI~vT~I~Ds 514 (658)
.|.+..+.......|.... .....+.++++|- -|...|.++++.|.+ .++++.+++..
T Consensus 32 ~v~~~~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~~pii~~t~~ 98 (152)
T 3heb_A 32 EIIAFTDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGIDILKLVKENPHTRRSPVVILTTT 98 (152)
T ss_dssp CEEEESSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHHHHHHHHHSTTTTTSCEEEEESC
T ss_pred eEEEeCCHHHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHHHHHHHHhcccccCCCEEEEecC
Confidence 5666666554333333111 1356789888885 488899999999987 35677776653
No 408
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=20.84 E-value=3e+02 Score=27.18 Aligned_cols=100 Identities=20% Similarity=0.180 Sum_probs=53.6
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcc--------hHHHHHhh--hcc
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHI--------NAISYIIH--EVT 524 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~D--------sAv~~~M~--~Vd 524 (658)
..+++|-|.+.++..+++.+.+.| -+|++.+ |.+.+.. ..+...|+.+..+.. ..+-..+. ++.
T Consensus 86 ~~i~~~~g~t~a~~~~~~~~~~~g--d~Vl~~~--~~~~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~ 159 (367)
T 3euc_A 86 MEVLLGNGSDEIISMLALAAARPG--AKVMAPV--PGFVMYA--MSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPA 159 (367)
T ss_dssp CEEEEEEHHHHHHHHHHHHTCCTT--CEEEEEE--SCSCCSC--HHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCCS
T ss_pred ceEEEcCCHHHHHHHHHHHHcCCC--CEEEEcC--CCHHHHH--HHHHHcCCeEEEecCCCCCCCCHHHHHHHhhccCCC
Confidence 467777777777766655543334 3455543 3333322 234567888877752 23333343 466
Q ss_pred EEEEcceeEecCCCeecccchHHHHHHHhhC--CCCeEe
Q 006152 525 RVFLGASSVLSNGTVCSRVGTACVAMVAYGF--HIPVLV 561 (658)
Q Consensus 525 ~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~--~VPVyV 561 (658)
.|++- .--...|.++..---..++-+|++| |+.+++
T Consensus 160 ~v~~~-~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~ 197 (367)
T 3euc_A 160 IVYLA-YPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVV 197 (367)
T ss_dssp EEEEE-SSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEE
T ss_pred EEEEc-CCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEE
Confidence 66662 2222234444333334555668888 887765
No 409
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=26.30 E-value=21 Score=36.52 Aligned_cols=22 Identities=18% Similarity=0.362 Sum_probs=12.8
Q ss_pred CCEEEeeCChHHHHHHHHHHHH
Q 006152 455 GDVLLTYGSSSAVEMILQHAHE 476 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e 476 (658)
..+++|.|.+.++..+++.+.+
T Consensus 90 ~~v~~~~g~~~a~~~~~~~~~~ 111 (392)
T 3b1d_A 90 EDIVFVEGVVPAISIAIQAFTK 111 (392)
Confidence 3566666666666555555443
No 410
>2vqe_K 30S ribosomal protein S11, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.55.4.1 PDB: 1gix_N* 1hnw_K* 1hnx_K* 1hnz_K* 1hr0_K 1ibk_K* 1ibl_K* 1ibm_K 1j5e_K 1jgo_N* 1jgp_N* 1jgq_N* 1ml5_N* 1n32_K* 1n33_K* 1n34_K 1n36_K 1xmo_K* 1xmq_K* 1xnq_K* ...
Probab=20.82 E-value=2.2e+02 Score=26.03 Aligned_cols=46 Identities=20% Similarity=0.187 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHcCC-eeEEEEeCCCCCchHHHHH-HHHHhCCCcEEEEcch
Q 006152 466 AVEMILQHAHELGK-QFRVVIVDSRPKHEGKLLL-RRLVRKGLSCTYTHIN 514 (658)
Q Consensus 466 aV~~vL~~A~e~gk-~f~ViV~ESRP~~EG~~La-~eL~~~GI~vT~I~Ds 514 (658)
+.+.+.+.|.+.|- .++|+|--. ..|++.+ +.|...|+.++.|.|.
T Consensus 64 aa~~~~~~~~~~Gi~~v~V~vkG~---G~Gre~airaL~~~Gl~I~~I~Dv 111 (129)
T 2vqe_K 64 AALDAAKKAMAYGMQSVDVIVRGT---GAGREQAIRALQASGLQVKSIVDD 111 (129)
T ss_dssp HHHHHHHHHHTTTCCEEEEEEESC---CTTHHHHHHHHHTSSSEEEECEEC
T ss_pred HHHHHHHHHHHhCCeEEEEEEECC---CCCHHHHHHHHHHCCCEEEEEEEc
Confidence 45677777877774 467777443 4577776 8999999999999883
No 411
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=20.81 E-value=1.3e+02 Score=30.20 Aligned_cols=53 Identities=21% Similarity=0.325 Sum_probs=30.8
Q ss_pred hccCCCEEEeeC-ChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEE
Q 006152 451 KIRDGDVLLTYG-SSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYT 511 (658)
Q Consensus 451 ~I~dgdvILT~g-~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I 511 (658)
.++.|++||.+| .+.+=...+.-|+..|- +||++.+ + +-.+++ .+.|.+.++-
T Consensus 149 ~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga--~vi~~~~-~--~~~~~~---~~lGa~~~i~ 202 (321)
T 3tqh_A 149 EVKQGDVVLIHAGAGGVGHLAIQLAKQKGT--TVITTAS-K--RNHAFL---KALGAEQCIN 202 (321)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEEC-H--HHHHHH---HHHTCSEEEE
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHcCC--EEEEEec-c--chHHHH---HHcCCCEEEe
Confidence 467899999997 44432233445555564 6787753 2 123444 4457765443
No 412
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=20.80 E-value=2.8e+02 Score=23.78 Aligned_cols=80 Identities=14% Similarity=0.109 Sum_probs=46.6
Q ss_pred CeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHH-Hhh--hccEEEEcceeEecCCCeecccchHHHHHHHhh-
Q 006152 479 KQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISY-IIH--EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYG- 554 (658)
Q Consensus 479 k~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~-~M~--~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~- 554 (658)
+..+|+|+|..+.. ...+...|.+.|+.|....+..-+. .+. ..|.||+..+- .++ -|.-.+..+-+.
T Consensus 6 ~~~~ILivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlii~D~~l--~~~-----~g~~~~~~lr~~~ 77 (154)
T 3gt7_A 6 RAGEILIVEDSPTQ-AEHLKHILEETGYQTEHVRNGREAVRFLSLTRPDLIISDVLM--PEM-----DGYALCRWLKGQP 77 (154)
T ss_dssp -CCEEEEECSCHHH-HHHHHHHHHTTTCEEEEESSHHHHHHHHTTCCCSEEEEESCC--SSS-----CHHHHHHHHHHST
T ss_pred CCCcEEEEeCCHHH-HHHHHHHHHHCCCEEEEeCCHHHHHHHHHhCCCCEEEEeCCC--CCC-----CHHHHHHHHHhCC
Confidence 45688888876543 3334577778888876665533222 222 57888887542 222 243334444333
Q ss_pred --CCCCeEeecccc
Q 006152 555 --FHIPVLVCCEAY 566 (658)
Q Consensus 555 --~~VPVyV~aety 566 (658)
.++|+++++...
T Consensus 78 ~~~~~pii~~s~~~ 91 (154)
T 3gt7_A 78 DLRTIPVILLTILS 91 (154)
T ss_dssp TTTTSCEEEEECCC
T ss_pred CcCCCCEEEEECCC
Confidence 479999987643
No 413
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=20.79 E-value=3.5e+02 Score=25.15 Aligned_cols=75 Identities=17% Similarity=0.246 Sum_probs=42.6
Q ss_pred EEEeCCCCCchHHHHHHHHHhCCCcEEEEcchH--HHHHhh-hccEEEE-cceeEecCCCeec--ccchHHHHHHH-hhC
Q 006152 483 VVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINA--ISYIIH-EVTRVFL-GASSVLSNGTVCS--RVGTACVAMVA-YGF 555 (658)
Q Consensus 483 ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsA--v~~~M~-~Vd~Vlv-GAdaV~aNG~VvN--KiGT~~lAl~A-k~~ 555 (658)
|.|++--..+ ...+.+.|.+.|+.++++.... ...+.. ++|.+|+ |.- |+... ..|-. ..++- -..
T Consensus 4 i~iid~~~s~-~~~~~~~l~~~G~~~~v~~~~~~~~~~~~~~~~dglil~gG~-----~~~~~~~~~~~~-~~~i~~~~~ 76 (195)
T 1qdl_B 4 TLIIDNYDSF-VYNIAQIVGELGSYPIVIRNDEISIKGIERIDPDRLIISPGP-----GTPEKREDIGVS-LDVIKYLGK 76 (195)
T ss_dssp EEEEECSCSS-HHHHHHHHHHTTCEEEEEETTTSCHHHHHHHCCSEEEECCCS-----SCTTSHHHHTTH-HHHHHHHTT
T ss_pred EEEEECCCch-HHHHHHHHHhCCCEEEEEeCCCCCHHHHhhCCCCEEEECCCC-----CChhhhhhhhHH-HHHHHHhcC
Confidence 5666644433 3456788999999999887653 223332 5899988 531 11111 12322 12221 146
Q ss_pred CCCeEeecc
Q 006152 556 HIPVLVCCE 564 (658)
Q Consensus 556 ~VPVyV~ae 564 (658)
++|++-+|-
T Consensus 77 ~~PvLGIC~ 85 (195)
T 1qdl_B 77 RTPILGVCL 85 (195)
T ss_dssp TSCEEEETH
T ss_pred CCcEEEEeh
Confidence 899997664
No 414
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=20.79 E-value=1.5e+02 Score=29.30 Aligned_cols=30 Identities=37% Similarity=0.475 Sum_probs=13.2
Q ss_pred EEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCC
Q 006152 457 VLLTYGSSSAVEMILQHAHELGKQFRVVIVDSR 489 (658)
Q Consensus 457 vILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESR 489 (658)
+|+..|.++. ..+++.|.+.| ++|++++..
T Consensus 4 ~Ililg~g~~-~~l~~a~~~~G--~~v~~~~~~ 33 (334)
T 2r85_A 4 RIATYASHSA-LQILKGAKDEG--FETIAFGSS 33 (334)
T ss_dssp EEEEESSTTH-HHHHHHHHHTT--CCEEEESCG
T ss_pred EEEEECChhH-HHHHHHHHhCC--CEEEEEECC
Confidence 4555544422 24444444433 345555443
No 415
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=20.76 E-value=1.9e+02 Score=28.91 Aligned_cols=92 Identities=15% Similarity=0.200 Sum_probs=49.6
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchH---------HHHHhhhccE
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINA---------ISYIIHEVTR 525 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsA---------v~~~M~~Vd~ 525 (658)
..+|+|-|.+.++..+|..+ ..+..-+|++.+ |.+.+.. ..+...|+.+.++.... +-..+.+=.+
T Consensus 51 ~~~~~~~sGt~al~~al~~~-~~~~gd~Vi~~~--~~~~~~~--~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~ 125 (367)
T 3nyt_A 51 KYCISCANGTDALQIVQMAL-GVGPGDEVITPG--FTYVATA--ETVALLGAKPVYVDIDPRTYNLDPQLLEAAITPRTK 125 (367)
T ss_dssp SEEEEESCHHHHHHHHHHHT-TCCTTCEEEEES--SSCTHHH--HHHHHTTCEEEEECBCTTTCSBCGGGTGGGCCTTEE
T ss_pred CcEEEeCCHHHHHHHHHHHh-CCCCcCEEEECC--CccHHHH--HHHHHcCCEEEEEecCCccCCcCHHHHHHhcCcCCc
Confidence 35666666666676656554 112334566644 4555533 33456798888875321 1111111122
Q ss_pred EEEcceeEecCCCeecccch----HHHHHHHhhCCCCeEe
Q 006152 526 VFLGASSVLSNGTVCSRVGT----ACVAMVAYGFHIPVLV 561 (658)
Q Consensus 526 VlvGAdaV~aNG~VvNKiGT----~~lAl~Ak~~~VPVyV 561 (658)
+|+ +.|..|+ -.|+-+|++|++.|++
T Consensus 126 ~v~----------~~~~~G~~~~~~~i~~la~~~~~~li~ 155 (367)
T 3nyt_A 126 AII----------PVSLYGQCADFDAINAIASKYGIPVIE 155 (367)
T ss_dssp EEC----------CBCGGGCCCCHHHHHHHHHHTTCCBEE
T ss_pred EEE----------eeCCccChhhHHHHHHHHHHcCCEEEE
Confidence 333 2234453 4577789999998886
No 416
>3r8n_K 30S ribosomal protein S11; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_K 3fih_K* 3iy8_K 3j18_K* 2wwl_K 3oar_K 3oaq_K 3ofb_K 3ofa_K 3ofp_K 3ofx_K 3ofy_K 3ofo_K 3r8o_K 4a2i_K 4gd1_K 4gd2_K 3i1m_K 1vs7_K* 3e1a_C ...
Probab=20.73 E-value=83 Score=28.31 Aligned_cols=46 Identities=22% Similarity=0.202 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHcCC-eeEEEEeCCCCCchHHHHH-HHHHhCCCcEEEEcch
Q 006152 466 AVEMILQHAHELGK-QFRVVIVDSRPKHEGKLLL-RRLVRKGLSCTYTHIN 514 (658)
Q Consensus 466 aV~~vL~~A~e~gk-~f~ViV~ESRP~~EG~~La-~eL~~~GI~vT~I~Ds 514 (658)
+.+.+.+.|.+.|. .++|+|-- ...|++.+ +.|...|+.++.|.|.
T Consensus 54 aa~~~~~~~~~~Gi~~v~v~vkG---~G~Gr~~airaL~~~Gl~I~~I~Dv 101 (117)
T 3r8n_K 54 AAERCADAVKEYGIKNLEVMVKG---PGPGRESTIRALNAAGFRITNITDV 101 (117)
T ss_dssp HHHHHHHHHTTSCCCEEEEEEEC---SSSSTTHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHHHhCCcEEEEEEeC---CCccHHHHHHHHHhCCCEEEEEEEe
Confidence 34566667777674 46777743 34566665 8899999999999884
No 417
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=20.64 E-value=3.3e+02 Score=27.48 Aligned_cols=54 Identities=20% Similarity=0.449 Sum_probs=33.6
Q ss_pred hccCCCEEEeeCChHHHHH-HHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEE
Q 006152 451 KIRDGDVLLTYGSSSAVEM-ILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYT 511 (658)
Q Consensus 451 ~I~dgdvILT~g~SsaV~~-vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I 511 (658)
.++.|++||.+|.+..+.. +++.|+..|- +||+++..+.. .+++++| |....+-
T Consensus 156 ~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga--~Vi~~~~~~~~--~~~~~~~---ga~~v~~ 210 (342)
T 4eye_A 156 QLRAGETVLVLGAAGGIGTAAIQIAKGMGA--KVIAVVNRTAA--TEFVKSV---GADIVLP 210 (342)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESSGGG--HHHHHHH---TCSEEEE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeCCHHH--HHHHHhc---CCcEEec
Confidence 3678999999998555433 3344555554 88988876543 3455544 6655443
No 418
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=20.62 E-value=1.7e+02 Score=30.26 Aligned_cols=33 Identities=12% Similarity=0.052 Sum_probs=20.8
Q ss_pred CCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeC
Q 006152 455 GDVLLTYGSSSAVEMILQHAHELGKQFRVVIVD 487 (658)
Q Consensus 455 gdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~E 487 (658)
..+++|.|-+.+++.+|+.+.....+-+|++.+
T Consensus 105 ~~v~~~~ggsea~~~al~~~~~~~~~~~vi~~~ 137 (439)
T 3dxv_A 105 HKIWFGHSGSDANEAAYRAIVKATGRSGVIAFA 137 (439)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHSCCEEEEET
T ss_pred CEEEEeCCHHHHHHHHHHHHHHHhCCCEEEEEC
Confidence 367777777888888887664322233566654
No 419
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=20.60 E-value=3.1e+02 Score=28.11 Aligned_cols=75 Identities=12% Similarity=0.160 Sum_probs=46.9
Q ss_pred cCCeeEEEEeCCCCCchHHHHHHHHHhCCCcE---------EEEcc--hHHHHHhhhccEEEEcceeEecCCCeecccch
Q 006152 477 LGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSC---------TYTHI--NAISYIIHEVTRVFLGASSVLSNGTVCSRVGT 545 (658)
Q Consensus 477 ~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~v---------T~I~D--sAv~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT 545 (658)
+...++++++-..|.. ..++...+.+.|+.. .++.+ .-+..+|..+|.++++.... ..|+
T Consensus 222 ~~p~~~lvivG~g~~~-~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~~dl~~~y~~aDv~vl~ss~~-e~gg------- 292 (374)
T 2xci_A 222 TYSSLKLILVPRHIEN-AKIFEKKARDFGFKTSFFENLEGDVILVDRFGILKELYPVGKIAIVGGTFV-NIGG------- 292 (374)
T ss_dssp TCTTCEEEEEESSGGG-HHHHHHHHHHTTCCEEETTCCCSSEEECCSSSCHHHHGGGEEEEEECSSSS-SSCC-------
T ss_pred hCCCcEEEEECCCHHH-HHHHHHHHHHCCCceEEecCCCCcEEEECCHHHHHHHHHhCCEEEECCccc-CCCC-------
Confidence 3446777766444432 234556666778863 35555 67889999999988875321 2222
Q ss_pred HHHHHHHhhCCCCeEe
Q 006152 546 ACVAMVAYGFHIPVLV 561 (658)
Q Consensus 546 ~~lAl~Ak~~~VPVyV 561 (658)
...+=|-.+|+||++
T Consensus 293 -~~~lEAmA~G~PVI~ 307 (374)
T 2xci_A 293 -HNLLEPTCWGIPVIY 307 (374)
T ss_dssp -CCCHHHHTTTCCEEE
T ss_pred -cCHHHHHHhCCCEEE
Confidence 124557789999986
No 420
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=20.51 E-value=2.2e+02 Score=29.42 Aligned_cols=73 Identities=14% Similarity=0.221 Sum_probs=44.1
Q ss_pred EEEeeCChHHHHHHHHHHHHcCC-eeEEEEe-CCCCCchHHHHHHHHHhCCCcEEEEc---------chHHHHHhh--hc
Q 006152 457 VLLTYGSSSAVEMILQHAHELGK-QFRVVIV-DSRPKHEGKLLLRRLVRKGLSCTYTH---------INAISYIIH--EV 523 (658)
Q Consensus 457 vILT~g~SsaV~~vL~~A~e~gk-~f~ViV~-ESRP~~EG~~La~eL~~~GI~vT~I~---------DsAv~~~M~--~V 523 (658)
.||.-|+++.++.+| .+++.|. ..+|.++ -.+|...+ + -.+.|||+.++. |..+...++ ++
T Consensus 109 ~vl~Sg~g~nl~~ll-~~~~~g~l~~~I~~Visn~~~~~~--~---A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~ 182 (302)
T 3o1l_A 109 VLMASRESHCLADLL-HRWHSDELDCDIACVISNHQDLRS--M---VEWHDIPYYHVPVDPKDKEPAFAEVSRLVGHHQA 182 (302)
T ss_dssp EEEECSCCHHHHHHH-HHHHTTCSCSEEEEEEESSSTTHH--H---HHTTTCCEEECCCCSSCCHHHHHHHHHHHHHTTC
T ss_pred EEEEeCCchhHHHHH-HHHHCCCCCcEEEEEEECcHHHHH--H---HHHcCCCEEEcCCCcCCHHHHHHHHHHHHHHhCC
Confidence 577778889986655 4555564 3454433 33665432 2 346899998883 233445554 58
Q ss_pred cEEEEcce-eEec
Q 006152 524 TRVFLGAS-SVLS 535 (658)
Q Consensus 524 d~VlvGAd-aV~a 535 (658)
|.|++-.- .|+.
T Consensus 183 DliVlagym~IL~ 195 (302)
T 3o1l_A 183 DVVVLARYMQILP 195 (302)
T ss_dssp SEEEESSCCSCCC
T ss_pred CEEEHhHhhhhcC
Confidence 88888443 4554
No 421
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=20.49 E-value=2.1e+02 Score=29.13 Aligned_cols=54 Identities=9% Similarity=0.065 Sum_probs=33.7
Q ss_pred hccCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEE
Q 006152 451 KIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYT 511 (658)
Q Consensus 451 ~I~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I 511 (658)
.++.|++||.+|-+.+=..++..|+..|- +||+++..+.. .+++++ .|...++-
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~Ga--~Vi~~~~~~~~--~~~~~~---lGa~~v~~ 229 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAMGA--ETYVISRSSRK--REDAMK---MGADHYIA 229 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHHTC--EEEEEESSSTT--HHHHHH---HTCSEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC--EEEEEcCCHHH--HHHHHH---cCCCEEEc
Confidence 46789999999985432234455555565 68888876543 344444 57665443
No 422
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=20.39 E-value=2.6e+02 Score=26.62 Aligned_cols=50 Identities=14% Similarity=0.177 Sum_probs=34.8
Q ss_pred HHHHHHcCCeeEEEEeCCCCCc--hHHHHHHHHHhCCCcEEEEc-chHHHHHhh
Q 006152 471 LQHAHELGKQFRVVIVDSRPKH--EGKLLLRRLVRKGLSCTYTH-INAISYIIH 521 (658)
Q Consensus 471 L~~A~e~gk~f~ViV~ESRP~~--EG~~La~eL~~~GI~vT~I~-DsAv~~~M~ 521 (658)
|.+..++|++. |++..+-|.. -|..+++.|.+.||++.+|+ .+++.++..
T Consensus 87 i~~~~~~g~~V-~~l~~GDP~i~~~~~~l~~~~~~~gi~v~viPGiSs~~aa~a 139 (232)
T 2qbu_A 87 VAAELEDGRDV-AFITLGDPSIYSTFSYLQQRIEDMGFKTEMVPGVTSFTACAA 139 (232)
T ss_dssp HHHHHHTTCCE-EEEESBCTTBSCSHHHHHHHHHHTTCCEEEECCCCHHHHHHH
T ss_pred HHHHHHCCCeE-EEEeCCCCccchhHHHHHHHHHHCCCcEEEeCCccHHHHHHH
Confidence 33334456654 5566688865 46677888999999999998 566666654
No 423
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=20.38 E-value=5.1e+02 Score=25.79 Aligned_cols=99 Identities=12% Similarity=0.120 Sum_probs=59.0
Q ss_pred cCCCEEEeeCChH----HHH---HHHHHHHHcC--CeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEE----cchHHHHH
Q 006152 453 RDGDVLLTYGSSS----AVE---MILQHAHELG--KQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYT----HINAISYI 519 (658)
Q Consensus 453 ~dgdvILT~g~Ss----aV~---~vL~~A~e~g--k~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I----~DsAv~~~ 519 (658)
.++.+|+..|+=. -+. .++....+++ ..++++++-..+......+-....+.| ++.++ ....+..+
T Consensus 249 ~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~-~~~~~~g~~~~~~~~~~ 327 (439)
T 3fro_A 249 DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVREL 327 (439)
T ss_dssp CSCEEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHH
T ss_pred CCCcEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcC-CEEEEcCCCCHHHHHHH
Confidence 4445666667532 232 3333333344 678888887665332234444445566 66654 34668899
Q ss_pred hhhccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEee
Q 006152 520 IHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVC 562 (658)
Q Consensus 520 M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~ 562 (658)
|..+|.+|+-... .| .| ...+=|-.+|+||++.
T Consensus 328 ~~~adv~v~ps~~---e~-----~~--~~~~EAma~G~Pvi~s 360 (439)
T 3fro_A 328 YGSVDFVIIPSYF---EP-----FG--LVALEAMCLGAIPIAS 360 (439)
T ss_dssp HTTCSEEEECBSC---CS-----SC--HHHHHHHHTTCEEEEE
T ss_pred HHHCCEEEeCCCC---CC-----cc--HHHHHHHHCCCCeEEc
Confidence 9999999876531 11 22 3455677889999874
No 424
>3d3u_A 4-hydroxybutyrate COA-transferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.80A {Porphyromonas gingivalis}
Probab=20.38 E-value=85 Score=33.88 Aligned_cols=96 Identities=11% Similarity=0.055 Sum_probs=47.4
Q ss_pred HHHHH-HhccCCCEEEeeCChHHHHHHHHHHHHc---CCeeEEEEeC--CCC---------------CchHHHHHHHHHh
Q 006152 445 VKHAV-TKIRDGDVLLTYGSSSAVEMILQHAHEL---GKQFRVVIVD--SRP---------------KHEGKLLLRRLVR 503 (658)
Q Consensus 445 a~~a~-~~I~dgdvILT~g~SsaV~~vL~~A~e~---gk~f~ViV~E--SRP---------------~~EG~~La~eL~~ 503 (658)
++.|+ ++|+||++|...|+...=+.++....++ -+.++|+..- ..+ ++-|-. .+++.+
T Consensus 14 a~eAv~~~IkdG~tV~~ggf~g~P~~Li~AL~~~~~~~~dLtli~~~~~~~~~~~~~~l~~~i~~~~~~~g~~-~r~~i~ 92 (439)
T 3d3u_A 14 ADEAVVDSLKPGTKVVFGHAAAAPVRFSQAMYRQREKLENITVFHMLYFGDAPHLAPEMRSHVHPTLNFLEGN-SRPASR 92 (439)
T ss_dssp HHHHHHHHCCTTCEEEECCBTTCCHHHHHHHHHTTTTCCSEEEECSCBSSCCTTSSGGGTTTEEEEC-------------
T ss_pred HHHHHHhhCCCcCEEEECcccChHHHHHHHHHHhhCCCCCEEEEEecCCCcchhccHHhCCcEEEEECCCChH-HHHHHH
Confidence 34566 7899999999998752222223333332 2567776431 111 111222 233343
Q ss_pred CC-CcEEEEcchHHH-HHhh---hccEEEEcceeEecCCCeec
Q 006152 504 KG-LSCTYTHINAIS-YIIH---EVTRVFLGASSVLSNGTVCS 541 (658)
Q Consensus 504 ~G-I~vT~I~DsAv~-~~M~---~Vd~VlvGAdaV~aNG~VvN 541 (658)
.| +.++-+..+.+. |+.. .+|..|+.|...-.+|.+.-
T Consensus 93 ~G~~~~~P~~ls~~~~~l~~~~l~~DVAlI~as~~D~~Gnls~ 135 (439)
T 3d3u_A 93 DRRVDFIPCHFHEVPELFRQGFFPLDVAVVQVSTPNEEGYCSF 135 (439)
T ss_dssp --------CCGGGHHHHHTTSSSCCSEEEEEEECCCTTSEEEC
T ss_pred cCCCeEECCCcchHHHHHHcCCCCCCEEEEEEecCCCCceEEE
Confidence 44 233333333343 4442 58999999999999998755
No 425
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=20.31 E-value=4.9e+02 Score=24.68 Aligned_cols=72 Identities=18% Similarity=0.201 Sum_probs=44.6
Q ss_pred CCCEEEeeCChHHHHHHHH-HHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEE-cc----hHHHHHhh------
Q 006152 454 DGDVLLTYGSSSAVEMILQ-HAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYT-HI----NAISYIIH------ 521 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~-~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I-~D----sAv~~~M~------ 521 (658)
.|.+||..|-|+-+...|. .+.++| .+|+++.-++. ..+..+|.+.|..+.++ +| ..+..++.
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G--~~V~~~~r~~~---~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 77 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLARAG--ANIVLNGFGDP---APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREF 77 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTT--CEEEEECSSCC---HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC--CEEEEEeCCch---HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 3567888887766554443 344445 57888765544 45667787778777665 34 34555555
Q ss_pred -hccEEEEcc
Q 006152 522 -EVTRVFLGA 530 (658)
Q Consensus 522 -~Vd~VlvGA 530 (658)
.+|.||--|
T Consensus 78 g~id~lv~~A 87 (255)
T 2q2v_A 78 GGVDILVNNA 87 (255)
T ss_dssp SSCSEEEECC
T ss_pred CCCCEEEECC
Confidence 578777655
No 426
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=20.28 E-value=2.8e+02 Score=26.34 Aligned_cols=64 Identities=14% Similarity=0.094 Sum_probs=36.5
Q ss_pred HHhCCCcEEEEc--chHHHHH---hhhccEEEEcceeEecCCCee-cccchHHHHHHHhhCCCCeEeeccccc
Q 006152 501 LVRKGLSCTYTH--INAISYI---IHEVTRVFLGASSVLSNGTVC-SRVGTACVAMVAYGFHIPVLVCCEAYK 567 (658)
Q Consensus 501 L~~~GI~vT~I~--DsAv~~~---M~~Vd~VlvGAdaV~aNG~Vv-NKiGT~~lAl~Ak~~~VPVyV~aetyK 567 (658)
+...|++++... ......+ -.++|.|++|.+.- ++.+- --.|+..-.++ ++.++||+|+-+.++
T Consensus 83 ~~~~g~~~~~~~~~g~~~~~I~~~~~~~dliV~G~~g~--~~~~~~~~~Gs~~~~v~-~~a~~PVlvv~~~~~ 152 (268)
T 3ab8_A 83 ALAAGVAVEAVLEEGVPHEAILRRARAADLLVLGRSGE--AHGDGFGGLGSTADRVL-RASPVPVLLAPGEPV 152 (268)
T ss_dssp HHHTTCCEEEEEEEECHHHHHHHHHTTCSEEEEESSCT--TSCTTCCSCCHHHHHHH-HHCSSCEEEECSSCC
T ss_pred HHhCCCCeEEEEecCCHHHHHHhhccCCCEEEEeccCC--CccccccccchhHHHHH-HhCCCCEEEECCCCC
Confidence 345676665432 1111222 33799999998752 10221 22576555554 667899999976553
No 427
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=20.26 E-value=2.3e+02 Score=26.91 Aligned_cols=99 Identities=14% Similarity=0.085 Sum_probs=56.2
Q ss_pred CCCEEEeeCChHHHHHHH-HHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEE-cc----hHHHHHhh------
Q 006152 454 DGDVLLTYGSSSAVEMIL-QHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYT-HI----NAISYIIH------ 521 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL-~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I-~D----sAv~~~M~------ 521 (658)
.|.+||..|-+.-+...| +.+.++| .+|+++..+.......+..+|.+.|..+.++ .| ..+..++.
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~G--~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRRG--ASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF 97 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC--CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 467888888776654433 4445555 4677765433333445567788778777665 34 34445554
Q ss_pred -hccEEEEcceeEecCCC-------------eecccchHHHHHHHhhC
Q 006152 522 -EVTRVFLGASSVLSNGT-------------VCSRVGTACVAMVAYGF 555 (658)
Q Consensus 522 -~Vd~VlvGAdaV~aNG~-------------VvNKiGT~~lAl~Ak~~ 555 (658)
.+|.||--|-. ...+. -+|-.|++.+.-.+..+
T Consensus 98 ~~~d~vi~~Ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 144 (274)
T 1ja9_A 98 GGLDFVMSNSGM-EVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKH 144 (274)
T ss_dssp SCEEEEECCCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCC-CCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46766654421 11111 13667887776655543
No 428
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=20.23 E-value=6.7e+02 Score=25.20 Aligned_cols=119 Identities=10% Similarity=0.040 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHhccCC------CEEEeeCC-h----HHHHHHHHHHHHcCCeeEEEEeCCCCCch-HHHHHHHHHhC
Q 006152 437 IILADRVIVKHAVTKIRDG------DVLLTYGS-S----SAVEMILQHAHELGKQFRVVIVDSRPKHE-GKLLLRRLVRK 504 (658)
Q Consensus 437 i~~a~~~Ia~~a~~~I~dg------dvILT~g~-S----saV~~vL~~A~e~gk~f~ViV~ESRP~~E-G~~La~eL~~~ 504 (658)
++.|...+++...+.+... ..|+.+|- + ..+ -+-+++++.|...+||+... +..+ -+.....+.+.
T Consensus 55 ME~AG~ava~~i~~~~~~~~~~~~~~~VlVlcG~GNNGGDGl-v~AR~L~~~G~~V~V~~~~~-~~~~~~~~~~~~~~~~ 132 (265)
T 2o8n_A 55 MELAGLSCATAIAKAYPPTSMSKSPPTVLVICGPGNNGGDGL-VCARHLKLFGYQPTIYYPKR-PNKPLFTGLVTQCQKM 132 (265)
T ss_dssp HHHHHHHHHHHHHHHSCGGGSSSSSCEEEEEECSSHHHHHHH-HHHHHHHHTTCEEEEECCSC-CSSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcccccccCCCCeEEEEECCCCCHHHHH-HHHHHHHHCCCcEEEEEeCC-CCCHHHHHHHHHHHHc
Confidence 3446666777766666431 36777743 2 222 23466777899888886643 3322 22334667788
Q ss_pred CCcEEE-EcchHHHHHhhhccEEEEcceeEecCCCeecccchHHHHH-HHhhCCCCeEe
Q 006152 505 GLSCTY-THINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAM-VAYGFHIPVLV 561 (658)
Q Consensus 505 GI~vT~-I~DsAv~~~M~~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl-~Ak~~~VPVyV 561 (658)
|+++.. +.+ ....+-..+|.|| |+|+--|--=.--|-+.-.+ ..+..+.||+-
T Consensus 133 g~~~~~~~~~-~~~~l~~~~dlII---DALfGtGl~~~l~~~~~~lI~~iN~~~~~VvA 187 (265)
T 2o8n_A 133 DIPFLGEMPP-EPMMVDELYELVV---DAIFGFSFKGDVREPFHSILSVLSGLTVPIAS 187 (265)
T ss_dssp TCCBCSSCCS-SHHHHHHHCSEEE---EESCCTTCCCCCCTTHHHHHHHHHTCSSCEEE
T ss_pred CCcEEecccc-hhhhccCCCcEEE---EeeccCCCCCCCcHHHHHHHHHHHhcCCCEEE
Confidence 987631 111 1111223678775 67776663222223333222 34456777653
No 429
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=20.14 E-value=3.5e+02 Score=26.02 Aligned_cols=78 Identities=10% Similarity=0.039 Sum_probs=48.1
Q ss_pred cCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEE-cc----hHHHHHhh------
Q 006152 453 RDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYT-HI----NAISYIIH------ 521 (658)
Q Consensus 453 ~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I-~D----sAv~~~M~------ 521 (658)
..+.+||..|-++-+...|.+... .+..+|+++..|.......+..++...|..+.++ +| ..+..++.
T Consensus 23 ~~~k~vlITGas~gIG~~~a~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (269)
T 3gk3_A 23 QAKRVAFVTGGMGGLGAAISRRLH-DAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF 101 (269)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHH-TTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred hcCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 456788888887766554443332 2346788888666555556667777777777665 33 23333333
Q ss_pred -hccEEEEcce
Q 006152 522 -EVTRVFLGAS 531 (658)
Q Consensus 522 -~Vd~VlvGAd 531 (658)
++|.||-.|-
T Consensus 102 g~id~li~nAg 112 (269)
T 3gk3_A 102 GKVDVLINNAG 112 (269)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 5888887663
No 430
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=20.08 E-value=3e+02 Score=26.49 Aligned_cols=75 Identities=19% Similarity=0.182 Sum_probs=48.6
Q ss_pred CCCEEEeeCChHHHHHHHHH-HHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEE-cc----hHHHHHhh------
Q 006152 454 DGDVLLTYGSSSAVEMILQH-AHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYT-HI----NAISYIIH------ 521 (658)
Q Consensus 454 dgdvILT~g~SsaV~~vL~~-A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I-~D----sAv~~~M~------ 521 (658)
.|.+||..|-++-+...|.+ +.++| .+|+++..|......++..+|.+.|..+.++ +| ..+..++.
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G--~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENG--YNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF 80 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCC--CEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46778888877665544433 34444 5777776676666667778888888887766 33 33444444
Q ss_pred -hccEEEEcc
Q 006152 522 -EVTRVFLGA 530 (658)
Q Consensus 522 -~Vd~VlvGA 530 (658)
++|.+|--|
T Consensus 81 g~id~lv~nA 90 (258)
T 3oid_A 81 GRLDVFVNNA 90 (258)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 458888766
No 431
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=20.07 E-value=1.6e+02 Score=27.06 Aligned_cols=70 Identities=13% Similarity=0.094 Sum_probs=45.5
Q ss_pred EEEee-----CChHHHHHHHHHHHH-cC--CeeEEEEeCCCCCchHH----HHHHHHHhCCCcEEEEcchHH-HHHhhhc
Q 006152 457 VLLTY-----GSSSAVEMILQHAHE-LG--KQFRVVIVDSRPKHEGK----LLLRRLVRKGLSCTYTHINAI-SYIIHEV 523 (658)
Q Consensus 457 vILT~-----g~SsaV~~vL~~A~e-~g--k~f~ViV~ESRP~~EG~----~La~eL~~~GI~vT~I~DsAv-~~~M~~V 523 (658)
.||.. |+|..-|.++++..+ .| ..|.|.=.-+.++..|. +....|.+.||+.. -.--.+ ...+.+
T Consensus 6 ~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~p~a~~~l~~~Gid~s-~~ar~l~~~~~~~- 83 (163)
T 1u2p_A 6 HVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNWHVGSCADERAAGVLRAHGYPTD-HRAAQVGTEHLAA- 83 (163)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHTTCCCC-CCCCBCCHHHHTS-
T ss_pred EEEEEcCCcHhHHHHHHHHHHHHHHHCCCCCcEEEEecccCCCcCCCCCCHHHHHHHHHcCcCCC-ceeeECChhhccC-
Confidence 45655 457788888887654 33 35899988888876553 44588999999876 221112 334456
Q ss_pred cEEEE
Q 006152 524 TRVFL 528 (658)
Q Consensus 524 d~Vlv 528 (658)
|.||.
T Consensus 84 DlIi~ 88 (163)
T 1u2p_A 84 DLLVA 88 (163)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 77765
No 432
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=20.07 E-value=3.3e+02 Score=25.68 Aligned_cols=78 Identities=18% Similarity=0.144 Sum_probs=0.0
Q ss_pred CeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHhh---hccEEEEcceeEecCCCeecccchHHHHHHHhhC
Q 006152 479 KQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIH---EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGF 555 (658)
Q Consensus 479 k~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M~---~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~ 555 (658)
...+|+|+|..|.. ...+...|...|+.|....+..-+.-+- ..|.||+ |.-+.+++ |--.+..+-+.+
T Consensus 22 ~~~~ILivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvll--D~~lp~~~-----g~~~~~~lr~~~ 93 (250)
T 3r0j_A 22 PEARVLVVDDEANI-VELLSVSLKFQGFEVYTATNGAQALDRARETRPDAVIL--DVXMPGMD-----GFGVLRRLRADG 93 (250)
T ss_dssp SSCEEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHHHCCSEEEE--ESCCSSSC-----HHHHHHHHHHTT
T ss_pred CCceEEEEECCHHH-HHHHHHHHHHCCCEEEEECCHHHHHHHHHhCCCCEEEE--eCCCCCCC-----HHHHHHHHHhcC
Q ss_pred -CCCeEeecc
Q 006152 556 -HIPVLVCCE 564 (658)
Q Consensus 556 -~VPVyV~ae 564 (658)
++|+++++.
T Consensus 94 ~~~~ii~lt~ 103 (250)
T 3r0j_A 94 IDAPALFLTA 103 (250)
T ss_dssp CCCCEEEEEC
T ss_pred CCCCEEEEEC
No 433
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=20.04 E-value=1.6e+02 Score=25.35 Aligned_cols=64 Identities=9% Similarity=0.074 Sum_probs=36.8
Q ss_pred HHHHHhCCCcEEEEcchHH-HHHhhhccEEEEcceeEecCCCeec--ccchHHHHHHHhhCCCCeEeec
Q 006152 498 LRRLVRKGLSCTYTHINAI-SYIIHEVTRVFLGASSVLSNGTVCS--RVGTACVAMVAYGFHIPVLVCC 563 (658)
Q Consensus 498 a~eL~~~GI~vT~I~DsAv-~~~M~~Vd~VlvGAdaV~aNG~VvN--KiGT~~lAl~Ak~~~VPVyV~a 563 (658)
+..|.+.|++|+++..... ..-+.+.|.|++|+-.. +|+..- .+-.+.--+...-.++++.+++
T Consensus 20 a~~l~~~g~~v~~~~~~~~~~~~l~~~d~iiig~pty--~~g~~p~~~~~~fl~~l~~~l~~k~~~~f~ 86 (138)
T 5nul_A 20 AKGIIESGKDVNTINVSDVNIDELLNEDILILGCSAM--TDEVLEESEFEPFIEEISTKISGKKVALFG 86 (138)
T ss_dssp HHHHHHTTCCCEEEEGGGCCHHHHTTCSEEEEEECCB--TTTBCCTTTHHHHHHHHGGGCTTCEEEEEE
T ss_pred HHHHHHCCCeEEEEEhhhCCHHHHhhCCEEEEEcCcc--CCCCCChHHHHHHHHHHHhhcCCCEEEEEE
Confidence 3556677888887764432 23456899999998543 333332 2333332222223578887766
No 434
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=20.02 E-value=3.1e+02 Score=22.26 Aligned_cols=76 Identities=16% Similarity=0.307 Sum_probs=44.4
Q ss_pred EEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHH-Hhh--hccEEEEcceeEecCCCeecccchHHHHHHHhhCCCC
Q 006152 482 RVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISY-IIH--EVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIP 558 (658)
Q Consensus 482 ~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~-~M~--~Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VP 558 (658)
+|.++|..|.. ...+...|.+.|..|....+..-+. .+. ..|.||+..+ +.++ -|--.+..+-+.+++|
T Consensus 4 ~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlii~D~~--~p~~-----~g~~~~~~lr~~~~~~ 75 (120)
T 3f6p_A 4 KILVVDDEKPI-ADILEFNLRKEGYEVHCAHDGNEAVEMVEELQPDLILLDIM--LPNK-----DGVEVCREVRKKYDMP 75 (120)
T ss_dssp EEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHTTCCSEEEEETT--STTT-----HHHHHHHHHHTTCCSC
T ss_pred eEEEEECCHHH-HHHHHHHHHhCCEEEEEeCCHHHHHHHHhhCCCCEEEEeCC--CCCC-----CHHHHHHHHHhcCCCC
Confidence 67777766543 2234466777888777655433222 122 5788887543 3322 3544555555667899
Q ss_pred eEeeccc
Q 006152 559 VLVCCEA 565 (658)
Q Consensus 559 VyV~aet 565 (658)
+++++..
T Consensus 76 ii~~t~~ 82 (120)
T 3f6p_A 76 IIMLTAK 82 (120)
T ss_dssp EEEEEES
T ss_pred EEEEECC
Confidence 9998764
Done!